Query 005417
Match_columns 697
No_of_seqs 592 out of 3062
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 00:46:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.7 1.1E-16 3.7E-21 165.5 10.0 128 249-388 10-138 (257)
2 3hnr_A Probable methyltransfer 99.6 1.6E-14 5.6E-19 142.5 17.4 135 284-423 46-201 (220)
3 1vl5_A Unknown conserved prote 99.6 9E-15 3.1E-19 148.6 13.1 112 264-387 26-142 (260)
4 3dh0_A SAM dependent methyltra 99.6 1.1E-14 3.9E-19 143.5 11.9 136 284-420 38-178 (219)
5 2p7i_A Hypothetical protein; p 99.6 2E-14 6.7E-19 143.2 13.5 102 284-390 43-146 (250)
6 4gek_A TRNA (CMO5U34)-methyltr 99.5 2.4E-14 8.2E-19 148.1 13.7 104 283-389 70-182 (261)
7 3h2b_A SAM-dependent methyltra 99.5 1.4E-14 4.9E-19 141.4 11.4 134 284-420 42-179 (203)
8 3l8d_A Methyltransferase; stru 99.5 5.1E-14 1.7E-18 140.7 15.6 132 284-419 54-196 (242)
9 1pjz_A Thiopurine S-methyltran 99.5 1.1E-14 3.6E-19 144.2 10.2 99 284-385 23-140 (203)
10 3dlc_A Putative S-adenosyl-L-m 99.5 6.4E-14 2.2E-18 136.9 15.6 103 285-390 45-153 (219)
11 3i9f_A Putative type 11 methyl 99.5 2.6E-14 8.8E-19 135.7 11.8 128 284-420 18-145 (170)
12 3bus_A REBM, methyltransferase 99.5 5.3E-14 1.8E-18 143.6 14.0 103 283-388 61-169 (273)
13 2gs9_A Hypothetical protein TT 99.5 7.5E-14 2.6E-18 137.1 14.4 101 283-389 36-136 (211)
14 3ege_A Putative methyltransfer 99.5 3E-14 1E-18 145.7 11.2 113 262-388 21-133 (261)
15 3ccf_A Cyclopropane-fatty-acyl 99.5 8.1E-14 2.8E-18 143.4 14.3 102 284-390 58-159 (279)
16 1nkv_A Hypothetical protein YJ 99.5 3.6E-14 1.2E-18 143.3 11.4 115 261-387 22-142 (256)
17 3g5l_A Putative S-adenosylmeth 99.5 4.9E-14 1.7E-18 142.4 12.3 103 283-388 44-148 (253)
18 3ujc_A Phosphoethanolamine N-m 99.5 3.4E-14 1.2E-18 143.5 11.1 103 283-388 55-162 (266)
19 3kkz_A Uncharacterized protein 99.5 7.5E-14 2.6E-18 142.6 12.9 101 283-387 46-152 (267)
20 2o57_A Putative sarcosine dime 99.5 7.2E-14 2.5E-18 144.7 12.5 103 283-388 82-190 (297)
21 2p35_A Trans-aconitate 2-methy 99.5 1E-13 3.5E-18 139.9 13.1 103 283-388 33-135 (259)
22 1xxl_A YCGJ protein; structura 99.5 1.1E-13 3.7E-18 139.5 12.9 101 284-388 22-127 (239)
23 2yqz_A Hypothetical protein TT 99.5 1.3E-13 4.5E-18 139.2 13.3 98 283-384 39-140 (263)
24 3dli_A Methyltransferase; PSI- 99.5 7.6E-14 2.6E-18 140.3 11.5 101 283-390 41-145 (240)
25 3thr_A Glycine N-methyltransfe 99.5 7.1E-14 2.4E-18 144.3 11.0 116 261-388 43-178 (293)
26 3ofk_A Nodulation protein S; N 99.5 2.1E-13 7.2E-18 134.3 13.6 101 283-388 51-157 (216)
27 2avn_A Ubiquinone/menaquinone 99.5 1.5E-13 5E-18 140.2 12.8 102 283-388 54-155 (260)
28 3ou2_A SAM-dependent methyltra 99.5 1.7E-13 5.8E-18 134.3 12.6 100 284-388 47-149 (218)
29 3f4k_A Putative methyltransfer 99.5 1.7E-13 5.7E-18 138.4 12.5 101 283-387 46-152 (257)
30 3bkw_A MLL3908 protein, S-aden 99.5 2.4E-13 8.3E-18 135.6 13.4 101 284-387 44-146 (243)
31 1xtp_A LMAJ004091AAA; SGPP, st 99.5 8.8E-14 3E-18 140.0 10.3 102 283-387 93-199 (254)
32 3jwh_A HEN1; methyltransferase 99.5 2.4E-13 8.1E-18 134.5 13.2 101 284-386 30-142 (217)
33 4fsd_A Arsenic methyltransfera 99.5 1.2E-13 4.1E-18 149.8 11.7 105 283-388 83-206 (383)
34 3dtn_A Putative methyltransfer 99.5 1E-13 3.5E-18 138.3 9.9 105 283-390 44-153 (234)
35 3jwg_A HEN1, methyltransferase 99.5 3.1E-13 1.1E-17 133.6 13.2 100 284-385 30-141 (219)
36 2aot_A HMT, histamine N-methyl 99.5 5.8E-14 2E-18 146.0 8.3 104 283-388 52-175 (292)
37 3sm3_A SAM-dependent methyltra 99.5 5.5E-13 1.9E-17 131.9 14.9 103 284-390 31-146 (235)
38 4htf_A S-adenosylmethionine-de 99.5 1.6E-13 5.6E-18 141.4 11.3 101 284-388 69-176 (285)
39 2gb4_A Thiopurine S-methyltran 99.5 2.8E-13 9.6E-18 139.4 12.3 99 284-385 69-191 (252)
40 3pfg_A N-methyltransferase; N, 99.5 4.4E-13 1.5E-17 136.4 13.6 99 283-386 50-152 (263)
41 3g5t_A Trans-aconitate 3-methy 99.4 2.4E-13 8.3E-18 141.4 11.9 101 283-385 36-149 (299)
42 4e2x_A TCAB9; kijanose, tetron 99.4 5.5E-14 1.9E-18 153.3 6.8 102 283-388 107-211 (416)
43 3mgg_A Methyltransferase; NYSG 99.4 3.3E-13 1.1E-17 138.1 11.9 104 283-388 37-145 (276)
44 3e23_A Uncharacterized protein 99.4 1.7E-13 5.8E-18 134.7 9.4 100 284-389 44-145 (211)
45 1ve3_A Hypothetical protein PH 99.4 6.4E-13 2.2E-17 131.2 13.4 101 284-387 39-144 (227)
46 2p8j_A S-adenosylmethionine-de 99.4 4.4E-13 1.5E-17 131.0 11.8 102 284-388 24-131 (209)
47 3lcc_A Putative methyl chlorid 99.4 6.1E-13 2.1E-17 133.1 13.1 128 285-419 68-203 (235)
48 3gu3_A Methyltransferase; alph 99.4 5.3E-13 1.8E-17 138.2 13.0 103 283-387 22-128 (284)
49 2kw5_A SLR1183 protein; struct 99.4 9.1E-13 3.1E-17 128.4 13.5 100 286-390 32-136 (202)
50 2ex4_A Adrenal gland protein A 99.4 3.6E-13 1.2E-17 135.5 10.9 103 283-388 79-188 (241)
51 3vc1_A Geranyl diphosphate 2-C 99.4 8.4E-13 2.9E-17 138.5 14.2 103 283-389 117-225 (312)
52 3e8s_A Putative SAM dependent 99.4 5.6E-13 1.9E-17 130.9 12.0 101 284-390 53-157 (227)
53 1vlm_A SAM-dependent methyltra 99.4 7.7E-13 2.6E-17 131.3 12.8 96 284-389 48-143 (219)
54 3bxo_A N,N-dimethyltransferase 99.4 7.6E-13 2.6E-17 131.7 12.7 102 283-388 40-144 (239)
55 2xvm_A Tellurite resistance pr 99.4 1E-12 3.5E-17 126.9 13.2 98 284-386 33-137 (199)
56 2pxx_A Uncharacterized protein 99.4 7.3E-13 2.5E-17 129.3 12.2 104 283-388 42-162 (215)
57 3cgg_A SAM-dependent methyltra 99.4 1.6E-12 5.6E-17 124.4 13.7 103 283-388 46-150 (195)
58 1y8c_A S-adenosylmethionine-de 99.4 7.4E-13 2.5E-17 131.9 11.4 116 262-388 22-145 (246)
59 1dus_A MJ0882; hypothetical pr 99.4 1.6E-12 5.4E-17 124.4 13.2 127 249-388 24-160 (194)
60 1kpg_A CFA synthase;, cyclopro 99.4 1.2E-12 4E-17 134.9 12.7 102 283-389 64-172 (287)
61 3mti_A RRNA methylase; SAM-dep 99.4 2E-12 6.8E-17 124.5 12.7 103 283-388 22-138 (185)
62 1zx0_A Guanidinoacetate N-meth 99.4 6.2E-13 2.1E-17 133.7 9.3 102 283-386 60-171 (236)
63 3hem_A Cyclopropane-fatty-acyl 99.4 1.7E-12 5.9E-17 135.2 12.9 101 283-390 72-188 (302)
64 3g2m_A PCZA361.24; SAM-depende 99.4 9.3E-13 3.2E-17 137.0 10.8 101 285-389 84-194 (299)
65 2vdw_A Vaccinia virus capping 99.4 6.8E-13 2.3E-17 140.0 9.8 102 283-387 48-171 (302)
66 3cc8_A Putative methyltransfer 99.4 1.6E-12 5.6E-17 127.9 11.7 101 283-389 32-134 (230)
67 3ocj_A Putative exported prote 99.4 1.4E-12 4.6E-17 136.5 11.5 104 283-388 118-230 (305)
68 3orh_A Guanidinoacetate N-meth 99.4 1E-12 3.6E-17 133.1 9.7 100 283-385 60-170 (236)
69 3d2l_A SAM-dependent methyltra 99.4 2.3E-12 7.8E-17 128.6 11.8 98 284-387 34-139 (243)
70 2g72_A Phenylethanolamine N-me 99.4 1E-12 3.5E-17 136.0 9.4 101 283-386 71-216 (289)
71 2a14_A Indolethylamine N-methy 99.4 7E-13 2.4E-17 136.1 7.5 104 283-388 55-200 (263)
72 3m70_A Tellurite resistance pr 99.3 5.2E-12 1.8E-16 130.2 13.2 98 284-386 121-224 (286)
73 3e05_A Precorrin-6Y C5,15-meth 99.3 2.2E-11 7.4E-16 119.4 17.0 99 284-387 41-144 (204)
74 1wzn_A SAM-dependent methyltra 99.3 5.3E-12 1.8E-16 127.2 13.0 101 283-387 41-147 (252)
75 2fk8_A Methoxy mycolic acid sy 99.3 4.5E-12 1.6E-16 132.8 12.7 103 283-390 90-199 (318)
76 1ri5_A MRNA capping enzyme; me 99.3 3.1E-12 1.1E-16 131.5 10.8 102 283-387 64-176 (298)
77 2i62_A Nicotinamide N-methyltr 99.3 1.9E-12 6.5E-17 130.8 9.0 103 283-387 56-200 (265)
78 3bgv_A MRNA CAP guanine-N7 met 99.3 2.9E-12 9.8E-17 134.3 10.4 103 283-388 34-158 (313)
79 3ggd_A SAM-dependent methyltra 99.3 2.2E-12 7.4E-17 129.7 8.9 104 283-390 56-168 (245)
80 3g07_A 7SK snRNA methylphospha 99.3 3.7E-12 1.3E-16 133.0 10.6 102 283-386 46-221 (292)
81 3bkx_A SAM-dependent methyltra 99.3 3.3E-12 1.1E-16 130.3 9.9 104 284-388 44-162 (275)
82 1p91_A Ribosomal RNA large sub 99.3 5.1E-12 1.8E-16 128.9 10.9 99 283-390 85-183 (269)
83 3iv6_A Putative Zn-dependent a 99.3 6.3E-12 2.2E-16 130.4 11.5 101 284-389 46-152 (261)
84 3p9n_A Possible methyltransfer 99.3 1E-11 3.5E-16 120.4 11.9 120 261-388 27-156 (189)
85 2zfu_A Nucleomethylin, cerebra 99.3 4.5E-12 1.6E-16 124.8 8.9 110 283-420 67-176 (215)
86 3htx_A HEN1; HEN1, small RNA m 99.3 1.7E-11 5.7E-16 143.3 14.6 103 284-388 722-837 (950)
87 3m33_A Uncharacterized protein 99.3 5.5E-12 1.9E-16 126.1 9.3 90 283-382 48-139 (226)
88 3hm2_A Precorrin-6Y C5,15-meth 99.3 2.2E-11 7.4E-16 115.6 12.9 99 284-388 26-130 (178)
89 2yxd_A Probable cobalt-precorr 99.3 4E-11 1.4E-15 113.7 14.6 93 284-387 36-133 (183)
90 3fpf_A Mtnas, putative unchara 99.3 1.6E-11 5.5E-16 129.4 12.6 97 283-386 122-223 (298)
91 3eey_A Putative rRNA methylase 99.3 2E-11 6.8E-16 118.6 12.3 105 284-388 23-142 (197)
92 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.6E-11 8.7E-16 120.1 13.3 101 284-386 42-157 (214)
93 3dmg_A Probable ribosomal RNA 99.3 3.2E-11 1.1E-15 131.4 14.3 102 283-388 233-343 (381)
94 1nt2_A Fibrillarin-like PRE-rR 99.3 2.8E-11 9.7E-16 120.7 12.3 98 283-386 57-162 (210)
95 3njr_A Precorrin-6Y methylase; 99.2 6.6E-11 2.3E-15 117.2 14.8 96 284-388 56-157 (204)
96 2fca_A TRNA (guanine-N(7)-)-me 99.2 2.1E-11 7.2E-16 121.4 11.0 102 284-387 39-155 (213)
97 3q87_B N6 adenine specific DNA 99.2 1.8E-11 6.3E-16 117.5 10.0 93 284-387 24-125 (170)
98 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.1E-11 3.8E-16 124.5 8.7 102 284-387 35-152 (218)
99 1l3i_A Precorrin-6Y methyltran 99.2 7.4E-11 2.5E-15 112.5 13.9 96 284-387 34-136 (192)
100 2qe6_A Uncharacterized protein 99.2 3.7E-11 1.3E-15 124.8 12.4 103 284-388 78-199 (274)
101 1xdz_A Methyltransferase GIDB; 99.2 3.5E-11 1.2E-15 121.5 11.6 98 283-386 70-175 (240)
102 3grz_A L11 mtase, ribosomal pr 99.2 2.5E-11 8.7E-16 118.8 10.3 98 283-388 60-162 (205)
103 3ckk_A TRNA (guanine-N(7)-)-me 99.2 2.9E-11 9.9E-16 122.9 10.5 103 283-387 46-170 (235)
104 2ift_A Putative methylase HI07 99.2 3.2E-11 1.1E-15 118.9 10.4 101 284-388 54-166 (201)
105 3evz_A Methyltransferase; NYSG 99.2 7.5E-11 2.6E-15 117.3 12.9 102 283-387 55-181 (230)
106 3lbf_A Protein-L-isoaspartate 99.2 5.7E-11 2E-15 116.5 11.7 94 284-387 78-176 (210)
107 4df3_A Fibrillarin-like rRNA/T 99.2 5.2E-11 1.8E-15 121.6 11.3 103 281-386 75-183 (233)
108 3uwp_A Histone-lysine N-methyl 99.2 2.2E-11 7.5E-16 133.5 9.1 118 261-389 159-292 (438)
109 3mq2_A 16S rRNA methyltransfer 99.2 2.3E-11 8E-16 120.2 8.2 101 284-386 28-141 (218)
110 3q7e_A Protein arginine N-meth 99.2 5.5E-11 1.9E-15 127.6 11.2 99 283-384 66-172 (349)
111 2fyt_A Protein arginine N-meth 99.2 5.2E-11 1.8E-15 127.5 10.8 96 284-382 65-168 (340)
112 3hp7_A Hemolysin, putative; st 99.2 8.3E-11 2.9E-15 123.8 12.1 130 283-418 85-227 (291)
113 1vbf_A 231AA long hypothetical 99.2 8.2E-11 2.8E-15 117.1 11.5 94 284-387 71-167 (231)
114 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.5E-10 5.2E-15 116.7 12.8 98 284-387 97-200 (258)
115 1af7_A Chemotaxis receptor met 99.2 1.5E-10 5E-15 120.9 12.9 100 284-384 106-251 (274)
116 1ej0_A FTSJ; methyltransferase 99.2 3.7E-11 1.3E-15 112.5 7.3 100 283-389 22-140 (180)
117 2fpo_A Methylase YHHF; structu 99.2 1.4E-10 4.7E-15 114.5 11.7 100 284-387 55-162 (202)
118 4dcm_A Ribosomal RNA large sub 99.2 1.4E-10 4.9E-15 125.9 12.8 100 285-387 224-336 (375)
119 2pjd_A Ribosomal RNA small sub 99.2 5.2E-11 1.8E-15 127.2 9.2 99 285-387 198-305 (343)
120 3dp7_A SAM-dependent methyltra 99.1 1.3E-10 4.4E-15 125.0 12.2 104 283-389 179-291 (363)
121 1jsx_A Glucose-inhibited divis 99.1 1.7E-10 5.8E-15 112.7 11.9 96 284-386 66-166 (207)
122 3g89_A Ribosomal RNA small sub 99.1 1.3E-10 4.6E-15 119.0 11.6 98 283-386 80-185 (249)
123 1ws6_A Methyltransferase; stru 99.1 4.7E-11 1.6E-15 112.4 7.3 99 284-388 42-150 (171)
124 2fhp_A Methylase, putative; al 99.1 8.7E-11 3E-15 112.4 9.2 118 260-388 28-157 (187)
125 2r3s_A Uncharacterized protein 99.1 1.8E-10 6.1E-15 121.2 12.1 104 283-389 165-275 (335)
126 4dzr_A Protein-(glutamine-N5) 99.1 2.5E-11 8.4E-16 118.1 5.1 101 283-386 30-166 (215)
127 3lpm_A Putative methyltransfer 99.1 2.6E-10 8.9E-15 116.5 12.9 102 284-387 50-178 (259)
128 1yb2_A Hypothetical protein TA 99.1 1.4E-10 4.7E-15 119.7 10.9 98 283-387 110-213 (275)
129 3i53_A O-methyltransferase; CO 99.1 2.3E-10 7.8E-15 121.0 12.8 103 283-389 169-278 (332)
130 2esr_A Methyltransferase; stru 99.1 8.3E-11 2.8E-15 112.3 8.4 101 284-388 32-141 (177)
131 1i9g_A Hypothetical protein RV 99.1 1.7E-10 5.7E-15 118.4 11.2 99 284-388 100-206 (280)
132 3p2e_A 16S rRNA methylase; met 99.1 8.2E-11 2.8E-15 118.7 8.5 102 283-385 24-139 (225)
133 3fzg_A 16S rRNA methylase; met 99.1 4.6E-11 1.6E-15 118.5 6.4 100 283-385 49-152 (200)
134 1dl5_A Protein-L-isoaspartate 99.1 1.8E-10 6.1E-15 121.6 11.2 110 262-386 62-176 (317)
135 2frn_A Hypothetical protein PH 99.1 2.8E-10 9.4E-15 118.2 12.1 122 284-419 126-253 (278)
136 3u81_A Catechol O-methyltransf 99.1 1.9E-10 6.5E-15 114.5 10.3 102 284-387 59-172 (221)
137 1fbn_A MJ fibrillarin homologu 99.1 2.4E-10 8.3E-15 114.5 11.1 94 283-384 74-177 (230)
138 2yxe_A Protein-L-isoaspartate 99.1 2.4E-10 8.2E-15 112.4 10.9 97 284-387 78-179 (215)
139 3opn_A Putative hemolysin; str 99.1 3.6E-11 1.2E-15 122.2 5.0 127 283-418 37-179 (232)
140 3r0q_C Probable protein argini 99.1 1.3E-10 4.6E-15 125.9 9.7 98 283-385 63-169 (376)
141 1g6q_1 HnRNP arginine N-methyl 99.1 3E-10 1E-14 120.7 12.2 112 261-383 24-143 (328)
142 3id6_C Fibrillarin-like rRNA/T 99.1 3.7E-10 1.3E-14 115.1 12.4 99 283-386 76-182 (232)
143 2bm8_A Cephalosporin hydroxyla 99.1 9.2E-11 3.1E-15 119.1 7.8 99 284-386 82-188 (236)
144 3gdh_A Trimethylguanosine synt 99.1 8.9E-12 3.1E-16 125.1 0.3 96 284-384 79-180 (241)
145 3gwz_A MMCR; methyltransferase 99.1 5E-10 1.7E-14 120.7 13.5 101 283-388 202-310 (369)
146 3tfw_A Putative O-methyltransf 99.1 4.5E-10 1.5E-14 114.4 12.4 101 284-388 64-173 (248)
147 3mb5_A SAM-dependent methyltra 99.1 3.3E-10 1.1E-14 114.5 11.2 98 284-388 94-197 (255)
148 2ld4_A Anamorsin; methyltransf 99.1 5.9E-11 2E-15 113.6 5.3 87 283-387 12-103 (176)
149 3sso_A Methyltransferase; macr 99.1 4.1E-11 1.4E-15 131.0 4.8 99 283-387 216-326 (419)
150 2ipx_A RRNA 2'-O-methyltransfe 99.1 2.4E-10 8.1E-15 114.5 9.6 100 283-386 77-183 (233)
151 3ntv_A MW1564 protein; rossman 99.1 3.9E-10 1.3E-14 113.4 11.1 99 284-387 72-178 (232)
152 2vdv_E TRNA (guanine-N(7)-)-me 99.1 3.6E-10 1.2E-14 114.6 10.8 103 283-387 49-175 (246)
153 1i1n_A Protein-L-isoaspartate 99.1 5.4E-10 1.8E-14 110.9 11.7 98 283-387 77-184 (226)
154 2y1w_A Histone-arginine methyl 99.1 2.7E-10 9.1E-15 122.1 10.1 113 261-385 36-155 (348)
155 1qzz_A RDMB, aclacinomycin-10- 99.1 4.4E-10 1.5E-14 120.3 11.7 99 283-386 182-288 (374)
156 1x19_A CRTF-related protein; m 99.1 6.2E-10 2.1E-14 119.0 12.5 102 283-388 190-298 (359)
157 2nxc_A L11 mtase, ribosomal pr 99.1 2.3E-10 8E-15 117.1 8.6 96 284-387 121-220 (254)
158 2plw_A Ribosomal RNA methyltra 99.1 4E-10 1.4E-14 109.5 9.9 97 284-387 23-156 (201)
159 3giw_A Protein of unknown func 99.1 2.2E-10 7.7E-15 119.6 8.4 106 283-389 78-204 (277)
160 3dr5_A Putative O-methyltransf 99.0 3.9E-10 1.3E-14 113.4 9.8 99 285-387 58-165 (221)
161 2ozv_A Hypothetical protein AT 99.0 6.4E-10 2.2E-14 114.2 11.6 102 284-386 37-171 (260)
162 2pbf_A Protein-L-isoaspartate 99.0 5.9E-10 2E-14 110.7 10.6 97 284-387 81-195 (227)
163 3bwc_A Spermidine synthase; SA 99.0 5.3E-10 1.8E-14 117.8 10.5 104 283-388 95-213 (304)
164 2gpy_A O-methyltransferase; st 99.0 6.6E-10 2.2E-14 111.2 10.4 99 284-387 55-162 (233)
165 2ip2_A Probable phenazine-spec 99.0 5.6E-10 1.9E-14 117.8 10.2 99 285-388 169-275 (334)
166 1fp1_D Isoliquiritigenin 2'-O- 99.0 3.7E-10 1.3E-14 121.5 9.0 98 283-387 209-308 (372)
167 1ixk_A Methyltransferase; open 99.0 1.6E-09 5.4E-14 114.7 13.7 106 284-389 119-250 (315)
168 1o54_A SAM-dependent O-methylt 99.0 1.2E-09 4.2E-14 112.4 12.5 97 284-387 113-215 (277)
169 2yvl_A TRMI protein, hypotheti 99.0 1.2E-09 4.1E-14 109.5 12.0 95 284-387 92-192 (248)
170 3tr6_A O-methyltransferase; ce 99.0 4.8E-10 1.7E-14 111.0 9.0 100 284-387 65-176 (225)
171 1u2z_A Histone-lysine N-methyl 99.0 6.1E-10 2.1E-14 123.2 10.3 103 283-388 242-362 (433)
172 3c3p_A Methyltransferase; NP_9 99.0 1E-09 3.4E-14 108.1 10.4 99 284-387 57-162 (210)
173 1fp2_A Isoflavone O-methyltran 99.0 5.6E-10 1.9E-14 119.2 9.3 99 283-388 188-291 (352)
174 1tw3_A COMT, carminomycin 4-O- 99.0 9.6E-10 3.3E-14 117.2 11.1 100 283-387 183-290 (360)
175 3adn_A Spermidine synthase; am 99.0 1.7E-09 5.7E-14 113.8 12.7 102 283-386 83-199 (294)
176 3duw_A OMT, O-methyltransferas 99.0 1.3E-09 4.4E-14 108.0 11.1 100 284-387 59-169 (223)
177 1jg1_A PIMT;, protein-L-isoasp 99.0 8.7E-10 3E-14 110.7 9.7 108 263-388 79-192 (235)
178 3mcz_A O-methyltransferase; ad 99.0 7.4E-10 2.5E-14 117.7 9.6 103 284-388 180-290 (352)
179 3reo_A (ISO)eugenol O-methyltr 99.0 8.8E-10 3E-14 118.9 9.9 100 283-388 203-303 (368)
180 1o9g_A RRNA methyltransferase; 99.0 9.5E-10 3.3E-14 111.4 9.6 104 283-386 51-215 (250)
181 2b25_A Hypothetical protein; s 99.0 1E-09 3.5E-14 116.4 10.1 98 284-387 106-221 (336)
182 2b3t_A Protein methyltransfera 99.0 1.9E-09 6.3E-14 111.2 11.6 102 284-387 110-240 (276)
183 3p9c_A Caffeic acid O-methyltr 99.0 1.1E-09 3.9E-14 117.9 10.4 100 283-388 201-301 (364)
184 3lst_A CALO1 methyltransferase 99.0 1.7E-09 5.9E-14 115.3 11.7 100 283-388 184-289 (348)
185 3bzb_A Uncharacterized protein 99.0 2.6E-09 8.8E-14 111.0 12.5 101 283-386 79-206 (281)
186 1g8a_A Fibrillarin-like PRE-rR 99.0 1.8E-09 6.3E-14 107.3 11.0 99 283-385 73-178 (227)
187 3tma_A Methyltransferase; thum 99.0 2.1E-09 7E-14 115.1 11.8 103 284-387 204-319 (354)
188 1xj5_A Spermidine synthase 1; 99.0 4E-09 1.4E-13 112.9 13.9 103 283-387 120-237 (334)
189 1r18_A Protein-L-isoaspartate( 99.0 1.6E-09 5.5E-14 108.0 10.1 96 284-387 85-196 (227)
190 2wa2_A Non-structural protein 98.9 3.3E-10 1.1E-14 118.2 4.8 97 283-388 82-196 (276)
191 2oxt_A Nucleoside-2'-O-methylt 98.9 5.8E-10 2E-14 115.7 6.6 96 283-387 74-187 (265)
192 2hnk_A SAM-dependent O-methylt 98.9 2.3E-09 7.8E-14 107.9 10.7 99 284-386 61-182 (239)
193 4azs_A Methyltransferase WBDD; 98.9 7.2E-10 2.5E-14 126.5 7.8 101 283-387 66-175 (569)
194 1iy9_A Spermidine synthase; ro 98.9 5.8E-09 2E-13 108.4 12.8 103 283-387 75-191 (275)
195 1ne2_A Hypothetical protein TA 98.9 8.8E-09 3E-13 100.4 13.3 94 283-384 51-146 (200)
196 2pt6_A Spermidine synthase; tr 98.9 4.3E-09 1.5E-13 111.9 12.0 104 283-388 116-233 (321)
197 2i7c_A Spermidine synthase; tr 98.9 4.9E-09 1.7E-13 109.3 12.1 104 283-388 78-195 (283)
198 2b2c_A Spermidine synthase; be 98.9 4.4E-09 1.5E-13 111.7 11.7 102 283-386 108-223 (314)
199 1inl_A Spermidine synthase; be 98.9 6.2E-09 2.1E-13 109.3 12.5 103 283-387 90-207 (296)
200 1uir_A Polyamine aminopropyltr 98.9 2.8E-09 9.6E-14 112.8 9.9 102 283-386 77-196 (314)
201 2nyu_A Putative ribosomal RNA 98.9 2.5E-09 8.4E-14 103.3 8.7 99 284-388 23-148 (196)
202 3b3j_A Histone-arginine methyl 98.9 2.1E-09 7.2E-14 120.4 9.3 98 283-384 158-262 (480)
203 2igt_A SAM dependent methyltra 98.9 5.8E-09 2E-13 111.5 12.2 102 284-388 154-275 (332)
204 3r3h_A O-methyltransferase, SA 98.9 5.3E-10 1.8E-14 113.9 4.0 100 284-387 61-172 (242)
205 3cbg_A O-methyltransferase; cy 98.9 3.6E-09 1.2E-13 106.5 9.9 100 284-387 73-184 (232)
206 2o07_A Spermidine synthase; st 98.9 3.3E-09 1.1E-13 112.0 9.9 103 283-387 95-211 (304)
207 3gjy_A Spermidine synthase; AP 98.9 4.4E-09 1.5E-13 111.9 10.8 100 285-386 91-201 (317)
208 3a27_A TYW2, uncharacterized p 98.9 1.4E-08 4.9E-13 105.0 14.2 99 283-388 119-222 (272)
209 1sui_A Caffeoyl-COA O-methyltr 98.9 2.5E-09 8.6E-14 109.2 8.3 99 284-386 80-191 (247)
210 3ajd_A Putative methyltransfer 98.9 3.5E-09 1.2E-13 109.6 9.4 106 284-389 84-215 (274)
211 1zg3_A Isoflavanone 4'-O-methy 98.9 2.8E-09 9.5E-14 114.0 8.5 99 283-388 193-296 (358)
212 2yxl_A PH0851 protein, 450AA l 98.9 1E-08 3.6E-13 113.6 13.4 107 284-390 260-394 (450)
213 2avd_A Catechol-O-methyltransf 98.9 4.2E-09 1.4E-13 104.5 8.6 100 284-387 70-181 (229)
214 1mjf_A Spermidine synthase; sp 98.8 7.9E-09 2.7E-13 107.6 10.7 100 283-386 75-194 (281)
215 4hc4_A Protein arginine N-meth 98.8 6.5E-09 2.2E-13 113.1 10.5 96 284-383 84-187 (376)
216 2h00_A Methyltransferase 10 do 98.8 9.2E-10 3.2E-14 111.5 3.3 102 283-385 65-192 (254)
217 2cmg_A Spermidine synthase; tr 98.8 9.8E-09 3.4E-13 106.2 10.5 93 283-387 72-173 (262)
218 1nv8_A HEMK protein; class I a 98.8 1.2E-08 4E-13 106.6 10.8 98 285-386 125-250 (284)
219 2p41_A Type II methyltransfera 98.8 2E-09 6.8E-14 113.8 4.6 100 283-388 82-194 (305)
220 2qm3_A Predicted methyltransfe 98.8 4.3E-08 1.5E-12 106.0 14.8 100 283-386 172-279 (373)
221 3dou_A Ribosomal RNA large sub 98.8 1.2E-08 4E-13 100.3 9.2 95 283-387 25-141 (191)
222 3lec_A NADB-rossmann superfami 98.8 2.8E-08 9.6E-13 101.2 12.1 119 284-420 22-146 (230)
223 1wy7_A Hypothetical protein PH 98.8 1.2E-07 4.2E-12 92.4 16.2 94 283-384 49-148 (207)
224 1sqg_A SUN protein, FMU protei 98.8 1.6E-08 5.6E-13 111.3 11.0 105 284-389 247-378 (429)
225 3c3y_A Pfomt, O-methyltransfer 98.8 1.2E-08 4.2E-13 103.1 9.2 99 284-386 71-182 (237)
226 3gnl_A Uncharacterized protein 98.8 3E-08 1E-12 101.8 12.1 119 284-420 22-146 (244)
227 3m6w_A RRNA methylase; rRNA me 98.8 1.5E-08 5.1E-13 113.1 10.1 107 284-390 102-234 (464)
228 1zq9_A Probable dimethyladenos 98.8 1.8E-08 6.2E-13 105.1 10.1 107 261-381 14-143 (285)
229 4a6d_A Hydroxyindole O-methylt 98.8 5.1E-08 1.8E-12 104.5 13.5 102 283-388 179-286 (353)
230 3tm4_A TRNA (guanine N2-)-meth 98.7 4.8E-08 1.6E-12 105.7 13.2 101 283-386 217-330 (373)
231 2frx_A Hypothetical protein YE 98.7 3.4E-08 1.1E-12 110.7 11.0 106 284-389 118-250 (479)
232 3kr9_A SAM-dependent methyltra 98.7 6.8E-08 2.3E-12 98.0 12.2 118 284-420 16-140 (225)
233 4dmg_A Putative uncharacterize 98.7 4.8E-08 1.6E-12 106.8 9.8 103 284-389 215-330 (393)
234 2b78_A Hypothetical protein SM 98.6 4.4E-08 1.5E-12 106.5 9.1 104 284-389 213-335 (385)
235 3c0k_A UPF0064 protein YCCW; P 98.6 7.5E-08 2.6E-12 104.8 10.4 103 284-388 221-342 (396)
236 2f8l_A Hypothetical protein LM 98.6 6.6E-08 2.3E-12 103.1 9.5 104 283-388 130-259 (344)
237 3m4x_A NOL1/NOP2/SUN family pr 98.6 1.2E-07 4.3E-12 105.5 11.0 107 284-390 106-239 (456)
238 3v97_A Ribosomal RNA large sub 98.6 5.1E-08 1.8E-12 114.0 8.2 102 284-387 540-659 (703)
239 2h1r_A Dimethyladenosine trans 98.6 1.1E-07 3.8E-12 99.9 10.0 86 262-361 29-119 (299)
240 2as0_A Hypothetical protein PH 98.6 5.3E-08 1.8E-12 105.9 7.6 105 283-389 217-339 (396)
241 1wxx_A TT1595, hypothetical pr 98.6 6.1E-08 2.1E-12 105.1 8.0 103 284-389 210-329 (382)
242 2xyq_A Putative 2'-O-methyl tr 98.6 1.9E-07 6.5E-12 98.2 11.4 94 283-388 63-174 (290)
243 2ih2_A Modification methylase 98.6 1E-07 3.4E-12 103.4 9.6 99 284-387 40-166 (421)
244 3k6r_A Putative transferase PH 98.6 3.1E-07 1.1E-11 96.0 12.4 122 283-418 125-252 (278)
245 3frh_A 16S rRNA methylase; met 98.6 1.1E-07 3.7E-12 97.6 8.6 96 283-384 105-205 (253)
246 1yub_A Ermam, rRNA methyltrans 98.5 5.3E-09 1.8E-13 106.2 -1.7 110 262-384 16-144 (245)
247 1qam_A ERMC' methyltransferase 98.5 1.9E-07 6.5E-12 95.1 9.7 72 283-359 30-105 (244)
248 2jjq_A Uncharacterized RNA met 98.5 7.5E-07 2.6E-11 98.3 14.2 95 283-386 290-388 (425)
249 2yx1_A Hypothetical protein MJ 98.5 2.8E-07 9.4E-12 98.3 9.5 93 284-388 196-294 (336)
250 3lcv_B Sisomicin-gentamicin re 98.5 4E-07 1.4E-11 94.3 10.3 101 283-386 132-237 (281)
251 3gru_A Dimethyladenosine trans 98.4 5.8E-07 2E-11 94.7 10.4 88 261-360 36-126 (295)
252 1uwv_A 23S rRNA (uracil-5-)-me 98.4 1E-06 3.5E-11 97.2 12.6 95 284-386 287-390 (433)
253 2okc_A Type I restriction enzy 98.4 4.2E-07 1.4E-11 100.5 9.2 116 262-386 158-308 (445)
254 2qfm_A Spermine synthase; sper 98.3 9.5E-07 3.2E-11 95.5 8.3 104 283-388 188-317 (364)
255 3pfg_A N-methyltransferase; N, 98.3 7.5E-07 2.6E-11 90.2 6.8 133 547-690 52-249 (263)
256 3e8s_A Putative SAM dependent 98.3 9.7E-07 3.3E-11 86.2 7.2 132 547-690 54-227 (227)
257 2xvm_A Tellurite resistance pr 98.2 5.8E-07 2E-11 86.3 4.4 116 547-675 34-171 (199)
258 3tqs_A Ribosomal RNA small sub 98.2 2E-06 7E-11 88.6 8.5 84 261-356 15-105 (255)
259 3k0b_A Predicted N6-adenine-sp 98.2 5.7E-06 2E-10 90.4 12.4 104 284-388 202-353 (393)
260 3ldu_A Putative methylase; str 98.2 4.6E-06 1.6E-10 90.8 11.3 104 284-388 196-347 (385)
261 3evf_A RNA-directed RNA polyme 98.2 2.4E-06 8.3E-11 88.8 8.2 103 284-388 75-187 (277)
262 2b9e_A NOL1/NOP2/SUN domain fa 98.2 6.8E-06 2.3E-10 87.0 11.9 105 284-389 103-238 (309)
263 3h2b_A SAM-dependent methyltra 98.2 1.4E-06 4.9E-11 84.4 6.0 131 547-687 43-192 (203)
264 3ldg_A Putative uncharacterize 98.2 1.1E-05 3.9E-10 87.8 13.2 104 284-388 195-346 (384)
265 3ocj_A Putative exported prote 98.2 1.4E-06 4.9E-11 90.7 5.8 137 547-690 120-304 (305)
266 1kpg_A CFA synthase;, cyclopro 98.2 1.9E-06 6.4E-11 88.4 6.5 98 547-652 66-168 (287)
267 3b5i_A S-adenosyl-L-methionine 98.1 5.6E-06 1.9E-10 90.0 10.2 106 283-389 52-229 (374)
268 2efj_A 3,7-dimethylxanthine me 98.1 4.6E-06 1.6E-10 90.8 9.5 106 284-390 53-230 (384)
269 3jwg_A HEN1, methyltransferase 98.1 6.3E-06 2.2E-10 80.9 9.3 137 546-690 30-210 (219)
270 3bxo_A N,N-dimethyltransferase 98.1 2.9E-06 1E-10 83.9 6.5 116 509-651 21-140 (239)
271 3bt7_A TRNA (uracil-5-)-methyl 98.1 4.7E-06 1.6E-10 89.9 8.5 94 285-388 215-329 (369)
272 4hg2_A Methyltransferase type 98.1 1.3E-06 4.3E-11 90.1 3.6 93 547-651 41-134 (257)
273 3i9f_A Putative type 11 methyl 98.1 4E-06 1.4E-10 78.9 6.8 127 546-690 18-160 (170)
274 1m6e_X S-adenosyl-L-methionnin 98.1 2.8E-06 9.7E-11 91.8 6.0 107 283-390 51-214 (359)
275 3dh0_A SAM dependent methyltra 98.1 2.3E-06 8E-11 83.8 4.6 134 547-690 39-193 (219)
276 2zfu_A Nucleomethylin, cerebra 98.1 1.4E-05 4.9E-10 78.1 10.2 120 547-690 69-191 (215)
277 3fut_A Dimethyladenosine trans 98.1 9.5E-06 3.2E-10 84.4 9.3 87 261-360 33-122 (271)
278 2p7i_A Hypothetical protein; p 98.0 1.7E-06 5.7E-11 85.6 3.3 92 548-652 45-141 (250)
279 3uzu_A Ribosomal RNA small sub 98.0 5.4E-06 1.8E-10 86.5 7.3 77 261-345 28-106 (279)
280 3dlc_A Putative S-adenosyl-L-m 98.0 6.1E-06 2.1E-10 80.0 7.1 94 548-652 46-148 (219)
281 3dmg_A Probable ribosomal RNA 98.0 8.7E-05 3E-09 80.7 16.7 93 285-386 47-140 (381)
282 1y8c_A S-adenosylmethionine-de 98.0 7.3E-06 2.5E-10 81.1 7.4 94 547-650 39-140 (246)
283 3dli_A Methyltransferase; PSI- 98.0 1.8E-06 6.3E-11 86.2 2.9 116 547-674 43-181 (240)
284 3ftd_A Dimethyladenosine trans 98.0 2.5E-05 8.7E-10 79.9 11.3 110 261-384 17-130 (249)
285 2dul_A N(2),N(2)-dimethylguano 98.0 1.2E-05 3.9E-10 87.5 8.8 96 284-385 48-164 (378)
286 2ar0_A M.ecoki, type I restric 98.0 6.7E-06 2.3E-10 93.4 7.3 104 284-387 170-314 (541)
287 4gqb_A Protein arginine N-meth 98.0 2.5E-05 8.5E-10 90.1 12.0 120 261-382 335-464 (637)
288 3hem_A Cyclopropane-fatty-acyl 98.0 4.6E-06 1.6E-10 86.4 5.5 98 547-652 74-183 (302)
289 3lcc_A Putative methyl chlorid 98.0 5.1E-06 1.7E-10 82.6 5.5 119 547-676 68-206 (235)
290 3grz_A L11 mtase, ribosomal pr 98.0 1.8E-05 6.1E-10 77.0 9.2 115 547-674 62-182 (205)
291 3evz_A Methyltransferase; NYSG 98.0 1.5E-05 5.3E-10 78.7 8.8 139 547-690 57-220 (230)
292 1xxl_A YCGJ protein; structura 98.0 2.7E-06 9.2E-11 85.2 2.9 95 546-652 22-124 (239)
293 1xtp_A LMAJ004091AAA; SGPP, st 98.0 2.3E-06 8E-11 85.5 2.4 122 546-676 94-237 (254)
294 3axs_A Probable N(2),N(2)-dime 97.9 2.9E-05 1E-09 84.8 11.0 97 284-385 53-158 (392)
295 4dzr_A Protein-(glutamine-N5) 97.9 9.4E-06 3.2E-10 78.4 6.3 142 546-690 31-205 (215)
296 1nkv_A Hypothetical protein YJ 97.9 3.2E-06 1.1E-10 84.7 3.1 94 547-652 38-140 (256)
297 3hnr_A Probable methyltransfer 97.9 2E-05 7E-10 77.0 8.8 132 546-690 46-212 (220)
298 4e2x_A TCAB9; kijanose, tetron 97.9 4.7E-06 1.6E-10 90.5 4.6 153 497-675 74-251 (416)
299 3ofk_A Nodulation protein S; N 97.9 2.5E-06 8.5E-11 83.5 1.9 98 545-652 51-154 (216)
300 3hm2_A Precorrin-6Y C5,15-meth 97.9 1.1E-05 3.8E-10 76.0 6.2 115 547-674 27-150 (178)
301 2fk8_A Methoxy mycolic acid sy 97.9 9.2E-06 3.1E-10 84.7 6.2 98 547-652 92-194 (318)
302 1vl5_A Unknown conserved prote 97.9 3.9E-06 1.3E-10 84.8 3.0 95 546-652 38-140 (260)
303 2o57_A Putative sarcosine dime 97.9 3.1E-06 1.1E-10 87.2 2.3 95 547-652 84-187 (297)
304 3hp7_A Hemolysin, putative; st 97.9 3.6E-05 1.2E-09 80.9 10.3 114 547-675 87-230 (291)
305 1l3i_A Precorrin-6Y methyltran 97.9 1.2E-05 4E-10 76.2 5.6 113 547-674 35-157 (192)
306 3m70_A Tellurite resistance pr 97.9 6.3E-06 2.1E-10 84.5 4.0 116 547-675 122-258 (286)
307 3mgg_A Methyltransferase; NYSG 97.9 4.9E-06 1.7E-10 84.7 3.1 96 547-652 39-142 (276)
308 3cgg_A SAM-dependent methyltra 97.9 1.6E-05 5.5E-10 75.4 6.4 134 547-690 48-195 (195)
309 3q87_B N6 adenine specific DNA 97.9 3.9E-05 1.3E-09 73.1 9.1 130 548-688 26-160 (170)
310 3sm3_A SAM-dependent methyltra 97.9 3.4E-06 1.2E-10 82.9 1.7 98 547-652 32-141 (235)
311 2pxx_A Uncharacterized protein 97.8 4.8E-06 1.6E-10 80.7 2.4 137 547-689 44-197 (215)
312 3g5l_A Putative S-adenosylmeth 97.8 1.4E-05 4.9E-10 80.1 6.0 94 547-651 46-144 (253)
313 3gu3_A Methyltransferase; alph 97.8 6.4E-06 2.2E-10 84.9 3.3 99 546-654 23-128 (284)
314 1jsx_A Glucose-inhibited divis 97.8 7.8E-06 2.7E-10 79.4 3.8 127 547-690 67-205 (207)
315 3kkz_A Uncharacterized protein 97.8 7.3E-06 2.5E-10 83.2 3.7 116 547-674 48-193 (267)
316 3ege_A Putative methyltransfer 97.8 8.8E-06 3E-10 82.7 4.3 93 546-651 35-129 (261)
317 3d2l_A SAM-dependent methyltra 97.8 1.4E-05 4.9E-10 79.1 5.6 93 547-650 35-135 (243)
318 3l8d_A Methyltransferase; stru 97.8 8.9E-06 3E-10 80.7 4.1 116 547-674 55-197 (242)
319 2i62_A Nicotinamide N-methyltr 97.8 1.4E-05 4.9E-10 80.1 5.7 125 546-676 57-238 (265)
320 3f4k_A Putative methyltransfer 97.8 5.9E-06 2E-10 82.9 2.6 116 547-674 48-193 (257)
321 3e23_A Uncharacterized protein 97.8 7E-06 2.4E-10 80.1 3.0 118 547-675 45-180 (211)
322 3ccf_A Cyclopropane-fatty-acyl 97.8 1.6E-05 5.6E-10 81.2 5.9 92 547-651 59-153 (279)
323 3mti_A RRNA methylase; SAM-dep 97.8 1.6E-05 5.6E-10 75.8 5.4 138 547-689 24-183 (185)
324 3cc8_A Putative methyltransfer 97.8 1.2E-05 4.2E-10 78.4 4.7 94 546-652 33-130 (230)
325 2r6z_A UPF0341 protein in RSP 97.8 2.8E-05 9.4E-10 80.2 7.4 70 284-356 84-170 (258)
326 1dus_A MJ0882; hypothetical pr 97.8 8.4E-06 2.9E-10 77.3 3.3 116 547-674 54-180 (194)
327 3bus_A REBM, methyltransferase 97.8 6.4E-06 2.2E-10 83.5 2.6 95 547-652 63-166 (273)
328 2b3t_A Protein methyltransfera 97.8 1.8E-05 6.3E-10 81.2 5.9 138 547-689 111-275 (276)
329 3ou2_A SAM-dependent methyltra 97.8 4.7E-06 1.6E-10 81.0 1.4 117 548-675 49-203 (218)
330 3thr_A Glycine N-methyltransfe 97.8 6.5E-06 2.2E-10 84.5 2.5 99 547-652 59-175 (293)
331 3ujc_A Phosphoethanolamine N-m 97.8 5.2E-06 1.8E-10 83.3 1.6 97 547-652 57-159 (266)
332 1m6y_A S-adenosyl-methyltransf 97.8 2.3E-05 7.8E-10 82.7 6.6 72 261-341 12-87 (301)
333 3eey_A Putative rRNA methylase 97.8 1.7E-05 5.9E-10 76.5 5.1 138 548-691 25-189 (197)
334 3ntv_A MW1564 protein; rossman 97.8 8.3E-06 2.9E-10 81.7 2.8 129 546-690 72-231 (232)
335 3i53_A O-methyltransferase; CO 97.8 4E-05 1.4E-09 80.6 8.0 136 542-689 166-331 (332)
336 2yqz_A Hypothetical protein TT 97.8 8.1E-06 2.8E-10 81.9 2.5 93 547-651 41-140 (263)
337 4htf_A S-adenosylmethionine-de 97.7 7E-06 2.4E-10 84.1 2.0 94 547-652 70-173 (285)
338 3dp7_A SAM-dependent methyltra 97.7 2.1E-05 7.4E-10 84.2 5.6 101 545-652 179-287 (363)
339 2ex4_A Adrenal gland protein A 97.7 1.5E-05 5.3E-10 79.5 4.1 123 546-677 80-225 (241)
340 3jwh_A HEN1; methyltransferase 97.7 3.6E-05 1.2E-09 75.5 6.4 121 547-675 31-190 (217)
341 3o4f_A Spermidine synthase; am 97.7 0.00029 9.8E-09 74.1 13.6 104 283-388 83-201 (294)
342 1qyr_A KSGA, high level kasuga 97.7 2.8E-05 9.4E-10 79.9 5.7 84 262-356 8-99 (252)
343 3v97_A Ribosomal RNA large sub 97.7 0.00011 3.9E-09 85.8 11.5 105 284-388 191-350 (703)
344 2gs9_A Hypothetical protein TT 97.7 1.6E-05 5.6E-10 77.4 3.5 92 547-652 38-132 (211)
345 3gcz_A Polyprotein; flavivirus 97.7 2.5E-05 8.6E-10 81.3 4.9 103 284-388 91-204 (282)
346 3tfw_A Putative O-methyltransf 97.7 4.4E-05 1.5E-09 77.3 6.7 133 546-690 64-225 (248)
347 3khk_A Type I restriction-modi 97.7 0.00012 4E-09 83.3 10.7 103 285-387 246-397 (544)
348 3e05_A Precorrin-6Y C5,15-meth 97.7 5.2E-05 1.8E-09 73.7 6.8 116 547-675 42-166 (204)
349 3duw_A OMT, O-methyltransferas 97.7 1.8E-05 6E-10 78.0 3.5 132 546-689 59-221 (223)
350 2avn_A Ubiquinone/menaquinone 97.7 3E-05 1E-09 78.5 5.3 95 547-652 56-152 (260)
351 3opn_A Putative hemolysin; str 97.7 9.7E-05 3.3E-09 74.7 8.9 128 547-689 39-201 (232)
352 2aot_A HMT, histamine N-methyl 97.7 4.5E-05 1.5E-09 78.8 6.5 98 547-651 54-171 (292)
353 3g5t_A Trans-aconitate 3-methy 97.7 1.5E-05 5.2E-10 82.4 2.9 94 546-650 37-147 (299)
354 1nt2_A Fibrillarin-like PRE-rR 97.7 4.6E-05 1.6E-09 75.6 6.2 96 548-651 60-160 (210)
355 3bkw_A MLL3908 protein, S-aden 97.7 2.6E-05 8.9E-10 77.2 4.4 95 547-652 45-144 (243)
356 1xdz_A Methyltransferase GIDB; 97.6 4.3E-05 1.5E-09 76.7 5.9 131 547-690 72-219 (240)
357 2frn_A Hypothetical protein PH 97.6 4.5E-05 1.5E-09 78.8 6.1 112 547-674 127-254 (278)
358 3lst_A CALO1 methyltransferase 97.6 6.9E-05 2.4E-09 79.6 7.7 135 543-689 182-347 (348)
359 3dtn_A Putative methyltransfer 97.6 1.2E-05 4.1E-10 79.6 1.6 97 547-652 46-148 (234)
360 3m33_A Uncharacterized protein 97.6 3.5E-05 1.2E-09 76.5 5.0 109 547-672 50-162 (226)
361 1ve3_A Hypothetical protein PH 97.6 3.5E-05 1.2E-09 75.5 4.8 97 547-653 40-143 (227)
362 3orh_A Guanidinoacetate N-meth 97.6 2E-05 6.9E-10 79.4 3.1 98 547-651 62-169 (236)
363 1ej0_A FTSJ; methyltransferase 97.6 9.3E-05 3.2E-09 68.5 7.4 131 547-689 24-177 (180)
364 3vc1_A Geranyl diphosphate 2-C 97.6 1.6E-05 5.5E-10 83.0 2.4 93 546-652 118-221 (312)
365 2p35_A Trans-aconitate 2-methy 97.6 6.1E-05 2.1E-09 75.4 6.3 93 547-652 35-132 (259)
366 1vlm_A SAM-dependent methyltra 97.6 2.7E-05 9.1E-10 76.8 3.2 112 547-674 49-185 (219)
367 1qzz_A RDMB, aclacinomycin-10- 97.6 6.9E-05 2.3E-09 79.9 6.6 136 544-690 181-356 (374)
368 2kw5_A SLR1183 protein; struct 97.6 4.6E-05 1.6E-09 73.6 4.7 113 548-674 32-168 (202)
369 1yzh_A TRNA (guanine-N(7)-)-me 97.6 8.8E-05 3E-09 72.9 6.8 123 547-674 43-179 (214)
370 1zx0_A Guanidinoacetate N-meth 97.6 2.5E-05 8.6E-10 77.9 2.9 98 547-652 62-170 (236)
371 4fsd_A Arsenic methyltransfera 97.6 2.5E-05 8.7E-10 84.3 3.1 116 547-672 85-246 (383)
372 3ua3_A Protein arginine N-meth 97.6 6.5E-05 2.2E-09 87.0 6.3 98 284-382 410-531 (745)
373 3lkd_A Type I restriction-modi 97.5 0.00044 1.5E-08 78.5 13.0 105 283-387 221-360 (542)
374 2plw_A Ribosomal RNA methyltra 97.5 7.9E-05 2.7E-09 71.9 5.9 134 547-689 24-195 (201)
375 3g2m_A PCZA361.24; SAM-depende 97.5 1.3E-05 4.6E-10 82.9 0.4 94 548-651 85-189 (299)
376 3c3p_A Methyltransferase; NP_9 97.5 2.3E-05 8E-10 76.6 2.0 93 547-652 58-160 (210)
377 3gwz_A MMCR; methyltransferase 97.5 0.0001 3.4E-09 79.2 6.8 137 543-689 200-368 (369)
378 3r3h_A O-methyltransferase, SA 97.5 5E-05 1.7E-09 77.0 4.2 137 546-695 61-225 (242)
379 3tr6_A O-methyltransferase; ce 97.5 3.4E-05 1.2E-09 76.0 2.7 128 547-690 66-224 (225)
380 2yxd_A Probable cobalt-precorr 97.5 0.00011 3.9E-09 68.9 6.1 110 547-675 37-155 (183)
381 4auk_A Ribosomal RNA large sub 97.5 0.00096 3.3E-08 72.2 13.9 86 283-378 211-296 (375)
382 3s1s_A Restriction endonucleas 97.5 0.00035 1.2E-08 82.2 11.1 105 283-387 321-467 (878)
383 2a14_A Indolethylamine N-methy 97.5 8E-05 2.8E-09 75.9 5.2 65 608-674 155-235 (263)
384 1ri5_A MRNA capping enzyme; me 97.5 3E-05 1E-09 79.2 1.8 99 547-653 66-175 (298)
385 4gek_A TRNA (CMO5U34)-methyltr 97.5 2.9E-05 1E-09 79.8 1.7 99 548-652 73-178 (261)
386 2g72_A Phenylethanolamine N-me 97.5 6E-05 2.1E-09 77.5 3.9 85 608-694 173-283 (289)
387 2oyr_A UPF0341 protein YHIQ; a 97.5 0.0001 3.6E-09 76.1 5.7 90 285-379 90-194 (258)
388 3ll7_A Putative methyltransfer 97.4 7.5E-05 2.6E-09 82.0 4.7 68 284-354 94-170 (410)
389 3u81_A Catechol O-methyltransf 97.4 3.4E-05 1.2E-09 76.3 1.8 131 546-689 59-212 (221)
390 3lpm_A Putative methyltransfer 97.4 0.00019 6.3E-09 72.9 7.3 123 547-673 51-197 (259)
391 2nxc_A L11 mtase, ribosomal pr 97.4 5.9E-05 2E-09 76.8 3.5 112 547-674 122-241 (254)
392 1wzn_A SAM-dependent methyltra 97.4 4E-05 1.4E-09 76.7 2.2 95 547-651 43-144 (252)
393 3bgv_A MRNA CAP guanine-N7 met 97.4 3.6E-05 1.2E-09 80.2 1.9 101 546-653 35-156 (313)
394 2fca_A TRNA (guanine-N(7)-)-me 97.4 0.00012 4.2E-09 72.3 5.7 121 547-672 40-174 (213)
395 2p8j_A S-adenosylmethionine-de 97.4 3.2E-05 1.1E-09 74.9 1.4 96 547-652 25-128 (209)
396 1x19_A CRTF-related protein; m 97.4 0.00015 5.2E-09 77.1 6.5 98 545-652 190-295 (359)
397 3cvo_A Methyltransferase-like 97.4 0.00098 3.4E-08 66.4 11.8 92 284-385 31-154 (202)
398 1tw3_A COMT, carminomycin 4-O- 97.4 0.00023 7.8E-09 75.5 7.6 136 545-690 183-356 (360)
399 3q7e_A Protein arginine N-meth 97.4 6.7E-05 2.3E-09 80.2 3.5 95 547-650 68-171 (349)
400 3dou_A Ribosomal RNA large sub 97.4 0.00013 4.5E-09 71.3 5.2 133 547-689 27-180 (191)
401 3r0q_C Probable protein argini 97.4 0.00014 4.8E-09 78.6 5.9 97 547-651 65-168 (376)
402 2vdw_A Vaccinia virus capping 97.4 6.3E-05 2.1E-09 79.0 3.0 98 547-653 50-170 (302)
403 2qy6_A UPF0209 protein YFCK; s 97.4 0.00014 4.8E-09 75.0 5.6 101 283-383 60-211 (257)
404 3eld_A Methyltransferase; flav 97.4 0.00053 1.8E-08 71.9 9.8 102 283-387 81-193 (300)
405 2ip2_A Probable phenazine-spec 97.4 0.00012 4.2E-09 76.8 5.0 132 547-689 169-333 (334)
406 3mcz_A O-methyltransferase; ad 97.3 5.2E-05 1.8E-09 80.2 2.0 135 546-690 180-349 (352)
407 2bm8_A Cephalosporin hydroxyla 97.3 0.00014 4.8E-09 73.4 5.1 114 547-671 83-213 (236)
408 3gdh_A Trimethylguanosine synt 97.3 2.8E-05 9.5E-10 77.5 -0.2 93 547-652 80-181 (241)
409 3fpf_A Mtnas, putative unchara 97.3 7.5E-05 2.6E-09 78.7 3.0 129 547-690 124-264 (298)
410 3g07_A 7SK snRNA methylphospha 97.3 5.2E-05 1.8E-09 78.7 1.6 47 606-652 174-220 (292)
411 3mb5_A SAM-dependent methyltra 97.3 0.00012 4.2E-09 73.4 4.3 106 547-668 95-211 (255)
412 2r3s_A Uncharacterized protein 97.3 0.00022 7.7E-09 74.5 6.4 135 546-690 166-335 (335)
413 3g89_A Ribosomal RNA small sub 97.3 0.00012 4.3E-09 74.5 4.2 131 547-690 82-229 (249)
414 3njr_A Precorrin-6Y methylase; 97.3 0.00028 9.7E-09 69.3 6.5 111 547-674 57-177 (204)
415 3dxy_A TRNA (guanine-N(7)-)-me 97.3 0.0002 6.8E-09 71.5 5.3 119 546-670 35-170 (218)
416 1pjz_A Thiopurine S-methyltran 97.3 8.4E-05 2.9E-09 72.9 2.5 120 547-676 24-175 (203)
417 2p41_A Type II methyltransfera 97.3 0.0003 1E-08 74.1 6.7 101 547-651 84-190 (305)
418 3ggd_A SAM-dependent methyltra 97.3 5.9E-05 2E-09 75.2 1.2 97 547-652 58-163 (245)
419 2oxt_A Nucleoside-2'-O-methylt 97.3 0.00029 1E-08 72.7 6.5 136 547-689 76-227 (265)
420 3cbg_A O-methyltransferase; cy 97.2 7.9E-05 2.7E-09 74.6 1.7 128 547-690 74-232 (232)
421 3dr5_A Putative O-methyltransf 97.2 9.8E-05 3.4E-09 73.9 2.3 134 548-693 59-216 (221)
422 2gb4_A Thiopurine S-methyltran 97.2 0.00015 5E-09 74.2 3.5 120 547-676 70-226 (252)
423 2ipx_A RRNA 2'-O-methyltransfe 97.2 0.00026 8.8E-09 70.4 5.1 135 547-689 79-231 (233)
424 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00047 1.6E-08 65.4 6.5 97 264-386 22-122 (153)
425 1g6q_1 HnRNP arginine N-methyl 97.2 0.00024 8.2E-09 75.2 4.9 95 547-649 40-142 (328)
426 2hnk_A SAM-dependent O-methylt 97.2 8.1E-05 2.8E-09 74.5 1.0 131 547-693 62-234 (239)
427 1g8a_A Fibrillarin-like PRE-rR 97.2 0.00035 1.2E-08 69.0 5.5 130 547-690 75-227 (227)
428 1vbf_A 231AA long hypothetical 97.1 0.0001 3.4E-09 72.8 1.4 89 547-653 72-166 (231)
429 4df3_A Fibrillarin-like rRNA/T 97.1 0.00074 2.5E-08 68.7 7.8 103 539-651 73-181 (233)
430 3p9n_A Possible methyltransfer 97.1 0.00011 3.7E-09 70.6 1.6 98 547-653 46-154 (189)
431 3sso_A Methyltransferase; macr 97.1 8.8E-05 3E-09 81.2 0.9 114 546-672 217-362 (419)
432 2vdv_E TRNA (guanine-N(7)-)-me 97.1 0.00038 1.3E-08 70.1 5.4 118 547-669 51-191 (246)
433 3p2e_A 16S rRNA methylase; met 97.1 0.00012 4E-09 73.5 1.6 100 547-650 26-137 (225)
434 3bkx_A SAM-dependent methyltra 97.1 0.00048 1.6E-08 69.7 6.1 100 547-652 45-159 (275)
435 3ckk_A TRNA (guanine-N(7)-)-me 97.1 0.00038 1.3E-08 70.3 5.3 122 546-671 47-189 (235)
436 2gpy_A O-methyltransferase; st 97.1 8.5E-05 2.9E-09 73.8 0.4 94 547-652 56-160 (233)
437 2nyu_A Putative ribosomal RNA 97.1 0.0002 6.8E-09 68.6 3.0 97 547-652 24-145 (196)
438 2ozv_A Hypothetical protein AT 97.1 0.0013 4.5E-08 67.0 9.2 121 547-671 38-188 (260)
439 1ws6_A Methyltransferase; stru 97.1 5.7E-05 2E-09 70.4 -0.9 94 547-653 43-148 (171)
440 2pwy_A TRNA (adenine-N(1)-)-me 97.1 0.00044 1.5E-08 69.1 5.5 108 547-670 98-217 (258)
441 2avd_A Catechol-O-methyltransf 97.1 8.7E-05 3E-09 73.2 0.3 129 547-690 71-229 (229)
442 4fzv_A Putative methyltransfer 97.1 0.0012 4.2E-08 71.2 9.3 107 283-390 148-289 (359)
443 3c3y_A Pfomt, O-methyltransfer 97.1 0.00014 4.7E-09 73.2 1.6 96 546-652 71-181 (237)
444 1sui_A Caffeoyl-COA O-methyltr 97.1 0.00015 5.2E-09 73.6 1.8 96 546-652 80-190 (247)
445 3iv6_A Putative Zn-dependent a 97.1 0.00027 9.1E-09 73.1 3.6 95 547-651 47-147 (261)
446 1fp1_D Isoliquiritigenin 2'-O- 97.1 0.00014 4.7E-09 78.0 1.6 97 545-652 209-306 (372)
447 2esr_A Methyltransferase; stru 97.0 0.0001 3.4E-09 69.8 0.2 96 547-653 33-139 (177)
448 3reo_A (ISO)eugenol O-methyltr 97.0 0.00033 1.1E-08 75.2 4.3 99 543-652 201-300 (368)
449 3lbf_A Protein-L-isoaspartate 97.0 0.00018 6.2E-09 69.9 1.7 89 547-653 79-175 (210)
450 2fyt_A Protein arginine N-meth 97.0 0.00041 1.4E-08 73.9 4.4 95 547-649 66-168 (340)
451 1yb2_A Hypothetical protein TA 97.0 0.00066 2.3E-08 69.5 5.7 110 547-671 112-231 (275)
452 2yvl_A TRMI protein, hypotheti 96.9 0.00078 2.7E-08 66.9 5.8 103 547-667 93-206 (248)
453 3c6k_A Spermine synthase; sper 96.9 0.0017 6E-08 70.4 8.9 102 283-386 205-332 (381)
454 3mq2_A 16S rRNA methyltransfer 96.9 0.00059 2E-08 66.8 4.7 123 547-674 29-181 (218)
455 2y1w_A Histone-arginine methyl 96.9 0.00064 2.2E-08 72.5 4.9 96 547-651 52-154 (348)
456 2wa2_A Non-structural protein 96.9 0.0013 4.3E-08 68.4 6.9 101 546-651 83-192 (276)
457 4dcm_A Ribosomal RNA large sub 96.9 0.00079 2.7E-08 72.9 5.5 99 547-651 224-333 (375)
458 1i1n_A Protein-L-isoaspartate 96.8 0.0003 1E-08 69.3 1.7 90 547-652 79-182 (226)
459 3p9c_A Caffeic acid O-methyltr 96.8 0.00046 1.6E-08 74.0 3.0 96 544-652 200-298 (364)
460 3id6_C Fibrillarin-like rRNA/T 96.8 0.0009 3.1E-08 68.0 4.9 96 547-651 78-180 (232)
461 1p91_A Ribosomal RNA large sub 96.8 0.00047 1.6E-08 69.7 2.7 89 547-652 87-178 (269)
462 1nv8_A HEMK protein; class I a 96.8 0.00075 2.6E-08 70.1 4.3 132 547-690 125-282 (284)
463 2ift_A Putative methylase HI07 96.8 0.0005 1.7E-08 67.2 2.7 98 547-655 55-166 (201)
464 1o54_A SAM-dependent O-methylt 96.8 0.002 6.8E-08 65.8 7.3 109 548-671 115-233 (277)
465 3a27_A TYW2, uncharacterized p 96.7 0.0012 4.1E-08 67.9 5.4 112 547-674 121-248 (272)
466 2wk1_A NOVP; transferase, O-me 96.7 0.0098 3.3E-07 62.1 12.1 100 284-386 107-245 (282)
467 2yxe_A Protein-L-isoaspartate 96.7 0.00032 1.1E-08 68.4 0.4 92 547-654 79-179 (215)
468 1fp2_A Isoflavone O-methyltran 96.7 0.00052 1.8E-08 72.9 2.1 95 545-652 188-288 (352)
469 3lkz_A Non-structural protein 96.6 0.019 6.7E-07 60.1 13.1 101 285-390 96-209 (321)
470 1r18_A Protein-L-isoaspartate( 96.6 0.00059 2E-08 67.5 1.7 92 548-652 87-194 (227)
471 2fhp_A Methylase, putative; al 96.6 0.00045 1.5E-08 65.4 0.7 95 547-652 46-154 (187)
472 2pjd_A Ribosomal RNA small sub 96.5 0.00049 1.7E-08 73.1 0.6 100 548-652 199-303 (343)
473 4a6d_A Hydroxyindole O-methylt 96.5 0.0025 8.5E-08 68.1 5.9 138 542-690 176-346 (353)
474 2xyq_A Putative 2'-O-methyl tr 96.5 0.0036 1.2E-07 65.6 6.9 131 547-689 65-210 (290)
475 2b25_A Hypothetical protein; s 96.5 0.0019 6.4E-08 68.1 4.9 91 547-653 107-220 (336)
476 1o9g_A RRNA methyltransferase; 96.5 0.0008 2.7E-08 67.6 1.9 47 608-654 167-216 (250)
477 1zg3_A Isoflavanone 4'-O-methy 96.5 0.00076 2.6E-08 71.8 1.7 95 545-652 193-293 (358)
478 1fbn_A MJ fibrillarin homologu 96.5 0.0026 8.8E-08 63.2 5.5 131 547-690 76-228 (230)
479 1i9g_A Hypothetical protein RV 96.4 0.003 1E-07 64.1 6.0 108 548-670 102-223 (280)
480 2pbf_A Protein-L-isoaspartate 96.4 0.00074 2.5E-08 66.5 1.1 92 547-652 82-193 (227)
481 2qe6_A Uncharacterized protein 96.4 0.002 6.9E-08 66.5 4.3 99 545-652 77-196 (274)
482 2fpo_A Methylase YHHF; structu 96.4 0.0016 5.4E-08 63.7 3.3 97 547-654 56-162 (202)
483 2px2_A Genome polyprotein [con 96.3 0.0056 1.9E-07 63.1 7.2 100 284-388 74-186 (269)
484 3htx_A HEN1; HEN1, small RNA m 96.3 0.0048 1.6E-07 73.0 7.1 99 547-652 723-834 (950)
485 1ixk_A Methyltransferase; open 96.3 0.0024 8.3E-08 67.2 4.2 121 547-670 120-268 (315)
486 1dl5_A Protein-L-isoaspartate 96.2 0.00098 3.3E-08 69.9 0.9 93 547-654 77-177 (317)
487 1wy7_A Hypothetical protein PH 96.1 0.0088 3E-07 57.7 7.1 116 547-674 51-172 (207)
488 1jg1_A PIMT;, protein-L-isoasp 96.1 0.0011 3.6E-08 66.1 0.5 90 547-653 93-190 (235)
489 1wg8_A Predicted S-adenosylmet 96.1 0.014 4.7E-07 61.0 8.5 54 262-326 9-62 (285)
490 1inl_A Spermidine synthase; be 96.1 0.0068 2.3E-07 63.2 6.3 141 547-691 92-253 (296)
491 1iy9_A Spermidine synthase; ro 96.0 0.011 3.6E-07 61.1 7.6 142 546-691 76-237 (275)
492 3ufb_A Type I restriction-modi 96.0 0.028 9.7E-07 63.5 11.7 119 261-387 203-364 (530)
493 1wxx_A TT1595, hypothetical pr 96.0 0.0029 9.8E-08 68.3 3.4 124 547-675 211-354 (382)
494 3b3j_A Histone-arginine methyl 95.9 0.0023 7.7E-08 71.6 2.2 94 547-650 160-261 (480)
495 3tma_A Methyltransferase; thum 95.9 0.006 2.1E-07 64.8 5.4 133 547-689 205-353 (354)
496 3bzb_A Uncharacterized protein 95.9 0.003 1E-07 65.1 2.9 118 547-674 81-234 (281)
497 3bwc_A Spermidine synthase; SA 95.9 0.0061 2.1E-07 63.8 5.2 139 547-690 97-258 (304)
498 2igt_A SAM dependent methyltra 95.9 0.0028 9.5E-08 67.5 2.6 122 547-673 155-300 (332)
499 2vz8_A Fatty acid synthase; tr 95.9 0.002 6.8E-08 85.0 1.8 102 284-386 1241-1349(2512)
500 4dmg_A Putative uncharacterize 95.9 0.0032 1.1E-07 68.6 3.1 124 547-675 216-355 (393)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.66 E-value=1.1e-16 Score=165.52 Aligned_cols=128 Identities=18% Similarity=0.254 Sum_probs=96.2
Q ss_pred ccccccccccch-hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc
Q 005417 249 SFRSASLIFDGV-EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER 327 (697)
Q Consensus 249 ~F~~~~~~yd~~-~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er 327 (697)
.|++.+..|+.. ..|.+.+.+.+....+ ...+|||||||+|.++..|++++ .+|+|+|+|+.|++.|+++
T Consensus 10 ~F~~~a~~Y~~~Rp~yp~~l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~ 80 (257)
T 4hg2_A 10 HFTPVADAYRAFRPRYPRALFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRH 80 (257)
T ss_dssp ----------CCCCCCCHHHHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCC
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHhcC------CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhhc
Confidence 366666677543 4455555555543322 34789999999999999999885 4689999999999988653
Q ss_pred CCCcEEEeecccCCCCCCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 328 GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 328 gl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.++.+.+++++.+|+++++||+|+|..+ +||. ++..++.|+.|+|||||.|++.....
T Consensus 81 -~~v~~~~~~~e~~~~~~~sfD~v~~~~~-~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 81 -PRVTYAVAPAEDTGLPPASVDVAIAAQA-MHWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp -TTEEEEECCTTCCCCCSSCEEEEEECSC-CTTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -CCceeehhhhhhhcccCCcccEEEEeee-hhHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 4678889999999999999999999988 6776 46789999999999999999987644
No 2
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.60 E-value=1.6e-14 Score=142.45 Aligned_cols=135 Identities=16% Similarity=0.188 Sum_probs=103.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-CcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++.. ++.+..+++..++++ ++||+|+|..+ +++.+
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~-l~~~~ 120 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYA-FHHLT 120 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESC-GGGSC
T ss_pred CCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcc-hhcCC
Confidence 3799999999999999999884 469999999999999998755 677888899999988 89999999988 66666
Q ss_pred cHHH--HHHHHHHhccCCeEEEEEeCCCChhhhhhhH-------------Hhh-----hhhhhhhhhhhccceEEeeecC
Q 005417 363 KDGI--LLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK-------------ENQ-----KRWNFVRDFVENLCWELVSQQD 422 (697)
Q Consensus 363 d~~~--~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~-------------e~~-----~~W~~l~~la~~~~w~ll~~~~ 422 (697)
++.. +|+++.++|||||++++.++........... ... ..-+.+..+.++.+++......
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 7665 9999999999999999998755432211110 000 0124566677778887765544
Q ss_pred c
Q 005417 423 E 423 (697)
Q Consensus 423 ~ 423 (697)
.
T Consensus 201 ~ 201 (220)
T 3hnr_A 201 N 201 (220)
T ss_dssp S
T ss_pred c
Confidence 3
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.58 E-value=9e-15 Score=148.65 Aligned_cols=112 Identities=15% Similarity=0.264 Sum_probs=93.3
Q ss_pred HHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecc
Q 005417 264 SHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFAS 338 (697)
Q Consensus 264 ~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da 338 (697)
.+.+.+.+...+ ..+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++ ++ ++.+.++|+
T Consensus 26 ~~~l~~~l~~~~--------~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~ 94 (260)
T 1vl5_A 26 LAKLMQIAALKG--------NEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA 94 (260)
T ss_dssp HHHHHHHHTCCS--------CCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHhCCCC--------CCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH
Confidence 345555555433 4799999999999999999885 3799999999999988765 33 477888999
Q ss_pred cCCCCCCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 339 KQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 339 ~~LPfpd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
..+|+++++||+|+|..+ ++|.+++..+|.++.|+|||||+|++.++.
T Consensus 95 ~~l~~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 95 EQMPFTDERFHIVTCRIA-AHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp -CCCSCTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HhCCCCCCCEEEEEEhhh-hHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 999999999999999998 666788899999999999999999998754
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.56 E-value=1.1e-14 Score=143.53 Aligned_cols=136 Identities=18% Similarity=0.103 Sum_probs=104.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.+.....++++|+++.+++.|+++ ++ ++.+..++...+++++++||+|++..+ +
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 116 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFT-F 116 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESC-G
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehh-h
Confidence 37999999999999999998753446899999999999988765 33 477888899999999999999999998 6
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEeee
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 420 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~~ 420 (697)
++.+++..+++++.++|||||++++.++................-+.+..+.+..+|+.+..
T Consensus 117 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 117 HELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp GGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 66678889999999999999999999865432111011111122345566677778876543
No 5
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.56 E-value=2e-14 Score=143.20 Aligned_cols=102 Identities=18% Similarity=0.139 Sum_probs=89.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-CcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
..+|||||||+|.++..+++.+. +++++|+|+.+++.|+++.. ++.+.++++..+ +++++||+|+|..+ +++.+
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~-l~~~~ 117 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHV-LEHID 117 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESC-GGGCS
T ss_pred CCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhH-HHhhc
Confidence 46899999999999999998853 68999999999999998754 677788888887 57789999999998 66678
Q ss_pred cHHHHHHHHH-HhccCCeEEEEEeCCCCh
Q 005417 363 KDGILLLEVD-RVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 363 d~~~~L~El~-RvLKPGG~Lvis~p~~~~ 390 (697)
++..+|+++. |+|||||+++++++....
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 8899999999 999999999999986543
No 6
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=2.4e-14 Score=148.09 Aligned_cols=104 Identities=14% Similarity=0.171 Sum_probs=85.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcC-CceeEEEEecCCHHHHHHHHHc----C--CCcEEEeecccCCCCCCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g-~~~~sV~gvD~S~~ml~~A~er----g--l~~~~~~~da~~LPfpd~sFDlV~~~~ 355 (697)
++.+|||||||+|.++..|+++. .....|+|+|+|+.|++.|+++ + .++.+.++|+..+|++ .||+|+|+.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeee
Confidence 45799999999999999998762 2346799999999999999875 2 3567888899888875 599999998
Q ss_pred ccccccccH--HHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 356 CGVDWDQKD--GILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 356 ~llh~~~d~--~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+ +|+.++. ..+|++++|+|||||.|++++....
T Consensus 148 ~-l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 148 T-LQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp C-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred e-eeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 8 6665443 4689999999999999999987553
No 7
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=1.4e-14 Score=141.37 Aligned_cols=134 Identities=15% Similarity=0.086 Sum_probs=105.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccc-c
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-Q 362 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~-~ 362 (697)
..+|||||||+|.++..+++.+. .++++|+++.|++.|+++...+.+.++++..+++++++||+|+|..++.|+. +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHH
Confidence 37899999999999999998853 6899999999999999987788899999999999999999999999844443 3
Q ss_pred cHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHH---hhhhhhhhhhhhhccceEEeee
Q 005417 363 KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE---NQKRWNFVRDFVENLCWELVSQ 420 (697)
Q Consensus 363 d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e---~~~~W~~l~~la~~~~w~ll~~ 420 (697)
+...+|+++.++|||||+++++++.......+.... ....-+.+..+.++.+|+.+..
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSS 179 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEE
Confidence 778999999999999999999987654311111100 0112345666777778877644
No 8
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.55 E-value=5.1e-14 Score=140.71 Aligned_cols=132 Identities=20% Similarity=0.219 Sum_probs=103.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc--CCCcEEEeecccCCCCCCCCccEEEecccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER--GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 361 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er--gl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~ 361 (697)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++ ..++.+.+++...+++++++||+|+|..+ +++.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINS-LEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESC-TTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcCh-Hhhc
Confidence 4799999999999999999985 3689999999999999887 34677888899999999999999999998 6666
Q ss_pred ccHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhh---------hhhhhhhhhhhccceEEee
Q 005417 362 QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ---------KRWNFVRDFVENLCWELVS 419 (697)
Q Consensus 362 ~d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~---------~~W~~l~~la~~~~w~ll~ 419 (697)
+++..+|.++.++|||||+++++++.............. ..-..+..+.+..+|+.+.
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 888899999999999999999998765432111100000 0113466677778888764
No 9
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.55 E-value=1.1e-14 Score=144.17 Aligned_cols=99 Identities=9% Similarity=-0.065 Sum_probs=81.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----------------CCCcEEEeecccCCCCCC-
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------------GLPAMIGSFASKQLPYPS- 345 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-----------------gl~~~~~~~da~~LPfpd- 345 (697)
..+|||+|||+|..+..|+++|. .|+|+|+|+.|++.|+++ ..++.+.++|+..+++++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 47999999999999999999863 699999999999999876 236778899999999875
Q ss_pred CCccEEEeccccccccc-cHHHHHHHHHHhccCCeEEEEEe
Q 005417 346 LSFDMLHCARCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 346 ~sFDlV~~~~~llh~~~-d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
++||+|++..++.+..+ +...+++++.|+|||||++++..
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 79999999887444332 23569999999999999844443
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.54 E-value=6.4e-14 Score=136.92 Aligned_cols=103 Identities=21% Similarity=0.242 Sum_probs=90.0
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
.+|||||||+|.++..+++. ....++++|+++.+++.|+++ ++ ++.+.+++...+++++++||+|+|..+ +
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-l 121 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS-V 121 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC-G
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECch-H
Confidence 39999999999999999987 356899999999999988766 33 577888999999999999999999998 5
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
++.+++..+|+++.++|||||+++++++....
T Consensus 122 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 122 FFWEDVATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred hhccCHHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 66688899999999999999999999865543
No 11
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.54 E-value=2.6e-14 Score=135.67 Aligned_cols=128 Identities=15% Similarity=0.091 Sum_probs=97.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 363 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~d 363 (697)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++..++.+...+ +++++++||+|++..+ +++.++
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~-l~~~~~ 90 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANS-FHDMDD 90 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESC-STTCSC
T ss_pred CCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccc-hhcccC
Confidence 4799999999999999999885 38999999999999999886677777666 7888899999999998 666678
Q ss_pred HHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEeee
Q 005417 364 DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 420 (697)
Q Consensus 364 ~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~~ 420 (697)
+..+++++.++|||||++++.++................-+.+..+.+ +|+.+..
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~ 145 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKR 145 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEc
Confidence 899999999999999999999875532111111111112234445555 7776644
No 12
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.53 E-value=5.3e-14 Score=143.56 Aligned_cols=103 Identities=26% Similarity=0.416 Sum_probs=89.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..+++.. ..+++++|+|+.+++.++++ ++ .+.+..++...+|+++++||+|++..+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 34799999999999999998863 35799999999999988765 43 477888899999999999999999998
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++.+++..+|+++.++|||||++++.++..
T Consensus 139 -l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 139 -LHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp -TTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred -hhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 6667788899999999999999999998643
No 13
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.53 E-value=7.5e-14 Score=137.06 Aligned_cols=101 Identities=25% Similarity=0.317 Sum_probs=89.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
+..+|||||||+|.++..+ +. ..++++|+++.+++.++++...+.+..++...+|+++++||+|++..+ +++.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTT-LEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESC-TTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcCh-hhhcC
Confidence 4579999999999999888 22 268999999999999998866677888899999999999999999988 66677
Q ss_pred cHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 363 KDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 363 d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
++..+|+++.++|||||.++++++...
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 889999999999999999999998654
No 14
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=3e-14 Score=145.68 Aligned_cols=113 Identities=18% Similarity=0.164 Sum_probs=94.6
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL 341 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L 341 (697)
.+.+.+.+.+... +..+|||||||+|.++..+++.+ ..++++|+|+.|++.++++. ++.+.+.+++.+
T Consensus 21 ~~~~~l~~~~~~~--------~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~ 88 (261)
T 3ege_A 21 RIVNAIINLLNLP--------KGSVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAENL 88 (261)
T ss_dssp HHHHHHHHHHCCC--------TTCEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCCT-TEEEECCCTTSC
T ss_pred HHHHHHHHHhCCC--------CCCEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcc-CCEEEECchhhC
Confidence 3444555555432 34899999999999999999864 57999999999999887765 788888999999
Q ss_pred CCCCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 342 PYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 342 Pfpd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
|+++++||+|+|..+ +++.+++..+++++.++|| ||++++.++..
T Consensus 89 ~~~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 89 ALPDKSVDGVISILA-IHHFSHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp CSCTTCBSEEEEESC-GGGCSSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred CCCCCCEeEEEEcch-HhhccCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 999999999999998 6666889999999999999 99988888754
No 15
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=8.1e-14 Score=143.45 Aligned_cols=102 Identities=15% Similarity=0.259 Sum_probs=90.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 363 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~d 363 (697)
..+|||||||+|.++..+++.+ ..++++|+|+.|++.++++..++.+..+++..+|+ +++||+|+|..+ +++.++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~-l~~~~d 132 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAM-LHWVKE 132 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESC-GGGCSC
T ss_pred CCEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcch-hhhCcC
Confidence 4799999999999999999853 57999999999999999886677788889999998 579999999988 777788
Q ss_pred HHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 364 DGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 364 ~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
+..+|.++.|+|||||++++..+....
T Consensus 133 ~~~~l~~~~~~LkpgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 133 PEAAIASIHQALKSGGRFVAEFGGKGN 159 (279)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 999999999999999999999876543
No 16
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=3.6e-14 Score=143.27 Aligned_cols=115 Identities=16% Similarity=0.160 Sum_probs=93.5
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEE
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 334 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~ 334 (697)
....+.+.+.+...+ ..+|||||||+|.++..+++.. ...++++|+|+.|++.|+++ ++ ++.+.
T Consensus 22 ~~~~~~l~~~~~~~~--------~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~ 91 (256)
T 1nkv_A 22 EEKYATLGRVLRMKP--------GTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFI 91 (256)
T ss_dssp HHHHHHHHHHTCCCT--------TCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHhcCCCC--------CCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 444555555554333 3799999999999999998873 34689999999999988754 44 47788
Q ss_pred eecccCCCCCCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 335 SFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 335 ~~da~~LPfpd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++++..+++ +++||+|+|..+ +++.+++..+|+++.|+|||||++++.++.
T Consensus 92 ~~d~~~~~~-~~~fD~V~~~~~-~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 92 HNDAAGYVA-NEKCDVAACVGA-TWIAGGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp ESCCTTCCC-SSCEEEEEEESC-GGGTSSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred ECChHhCCc-CCCCCEEEECCC-hHhcCCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 899999988 789999999988 566677889999999999999999998763
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.51 E-value=4.9e-14 Score=142.41 Aligned_cols=103 Identities=14% Similarity=0.183 Sum_probs=91.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC--CCcEEEeecccCCCCCCCCccEEEeccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 360 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg--l~~~~~~~da~~LPfpd~sFDlV~~~~~llh~ 360 (697)
...+|||||||+|.++..+++.+.. .++++|+|+.+++.|+++. ..+.+.++++..+++++++||+|+|..+ +++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLA-LHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESC-GGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchh-hhh
Confidence 4589999999999999999998642 7999999999999998874 4677888999999999999999999998 666
Q ss_pred cccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 361 DQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 361 ~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.+++..+|+++.++|||||+++++.+.+
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 6888999999999999999999987753
No 18
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.51 E-value=3.4e-14 Score=143.53 Aligned_cols=103 Identities=18% Similarity=0.195 Sum_probs=90.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
+..+|||||||+|.++..+++.. ...++++|+|+.+++.|+++. .++.+.+.|...+|+++++||+|+|..+ ++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 131 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDA-IL 131 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESC-GG
T ss_pred CCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHH-HH
Confidence 45799999999999999999873 357999999999999999875 4677888899999999999999999988 55
Q ss_pred cc--ccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 360 WD--QKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 360 ~~--~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+. +++..+|+++.++|||||++++.++..
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 55 677889999999999999999998744
No 19
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.50 E-value=7.5e-14 Score=142.58 Aligned_cols=101 Identities=21% Similarity=0.181 Sum_probs=87.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
++.+|||||||+|.++..+++. ....++++|+|+.+++.|+++ ++ .+.+.+.|...+|+++++||+|+|..+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 4589999999999999999988 345799999999999988765 43 377888999999999999999999998
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+ ++. ++..+++++.++|||||+++++++.
T Consensus 124 ~-~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 124 I-YNI-GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp G-GGT-CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred c-eec-CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 4 444 6889999999999999999999864
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.50 E-value=7.2e-14 Score=144.74 Aligned_cols=103 Identities=24% Similarity=0.305 Sum_probs=88.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ .+.+..++...+|+++++||+|++..+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 34799999999999999998872 24799999999999988764 33 477888899999999999999999998
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++.+++..+|+++.|+|||||++++.++..
T Consensus 160 -l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 160 -FLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp -GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred -hhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 5556778899999999999999999998754
No 21
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=1e-13 Score=139.89 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=91.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
...+|||||||+|.++..+++.. +...++++|+|+.|++.++++..++.+..+|...++ ++++||+|+|..+ ++|.+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~-l~~~~ 109 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAV-FQWVP 109 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESC-GGGST
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCc-hhhCC
Confidence 45789999999999999998872 234689999999999999988767888889999988 7889999999988 77778
Q ss_pred cHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 363 KDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 363 d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++..+|.++.++|||||+++++++..
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 110 DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 89999999999999999999998754
No 22
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.49 E-value=1.1e-13 Score=139.53 Aligned_cols=101 Identities=24% Similarity=0.335 Sum_probs=88.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++ ++ ++.+..+++..+|+++++||+|+|..+ +
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-l 97 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA-A 97 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC-G
T ss_pred CCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc-h
Confidence 4899999999999999999885 3799999999999888754 33 477888899999999999999999988 5
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++.+++..+|.++.++|||||++++.++..
T Consensus 98 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 556788899999999999999999987654
No 23
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.49 E-value=1.3e-13 Score=139.19 Aligned_cols=98 Identities=18% Similarity=0.249 Sum_probs=87.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
+..+|||||||+|.++..+++.+ ..++++|+|+.|++.++++ ..++.+..++...+|+++++||+|++..+ +
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL-W 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC-G
T ss_pred CCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc-h
Confidence 45799999999999999999874 4699999999999999877 34677888899999999999999999988 7
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEE
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis 384 (697)
|+.++...++.++.++|||||++++.
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 77788899999999999999999988
No 24
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.49 E-value=7.6e-14 Score=140.32 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=86.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC--CCCCCCccEEEeccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL--PYPSLSFDMLHCARCGVDW 360 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L--Pfpd~sFDlV~~~~~llh~ 360 (697)
+..+|||||||+|.++..+++.+. .++++|+|+.+++.++++ +.+..++...+ |+++++||+|+|..+ +++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~-l~~ 113 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHF-VEH 113 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESC-GGG
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCc-hhh
Confidence 357999999999999999998853 589999999999999887 66677777665 888999999999998 555
Q ss_pred cccH--HHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 361 DQKD--GILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 361 ~~d~--~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
.+++ ..+++++.++|||||+++++++....
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 5544 78999999999999999999987654
No 25
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.49 E-value=7.1e-14 Score=144.29 Aligned_cols=116 Identities=17% Similarity=0.295 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCc
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPA 331 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~ 331 (697)
..+.+.+.+.+.... ..+|||||||+|.++..|++.+. +++++|+|+.|++.|+++. ..+
T Consensus 43 ~~~~~~l~~~l~~~~--------~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 43 AEYKAWLLGLLRQHG--------CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHHHHHTT--------CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHHHHHhcccC--------CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhccccccccee
Confidence 445555666655433 37999999999999999999853 7999999999999987642 245
Q ss_pred EEEeecccCCC---CCCCCccEEEec-ccccccccc-------HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 332 MIGSFASKQLP---YPSLSFDMLHCA-RCGVDWDQK-------DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 332 ~~~~~da~~LP---fpd~sFDlV~~~-~~llh~~~d-------~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.+..++...++ +++++||+|+|. .+ +++..+ ...+|+++.++|||||+|+++.+..
T Consensus 112 ~~~~~d~~~~~~~~~~~~~fD~V~~~g~~-l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 112 VIEEANWLTLDKDVPAGDGFDAVICLGNS-FAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp EEEECCGGGHHHHSCCTTCEEEEEECTTC-GGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred eEeecChhhCccccccCCCeEEEEEcChH-HhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 56777888887 888999999998 67 666666 7789999999999999999998753
No 26
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.48 E-value=2.1e-13 Score=134.34 Aligned_cols=101 Identities=19% Similarity=0.257 Sum_probs=86.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
...+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. ++.+.+++...++ ++++||+|+|..+ ++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~-l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEV-LY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESC-GG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccH-HH
Confidence 34799999999999999999884 579999999999999987642 5678888988888 6789999999988 66
Q ss_pred ccccH---HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 360 WDQKD---GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 360 ~~~d~---~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+.+++ ..+|.++.++|||||+++++++..
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 66665 467999999999999999988754
No 27
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.48 E-value=1.5e-13 Score=140.25 Aligned_cols=102 Identities=21% Similarity=0.346 Sum_probs=89.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
...+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++... .+.++++..+++++++||+|+|..+++|+.+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 34799999999999999999885 4699999999999999987653 3777888999999999999999987688877
Q ss_pred cHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 363 KDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 363 d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++..+|+++.++|||||.+++++++.
T Consensus 130 ~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 130 NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 88899999999999999999998754
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.48 E-value=1.7e-13 Score=134.28 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=87.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC-CCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-LPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg-l~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
..+|||||||+|.++..+++.+ .+++++|+++.+++.+++.+ .++.+..+|...+ +++++||+|+|..+ +++.+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~-l~~~~ 121 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHW-LAHVP 121 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESC-GGGSC
T ss_pred CCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEech-hhcCC
Confidence 3699999999999999999884 46899999999999999877 4677888888888 78899999999998 55565
Q ss_pred cH--HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 363 KD--GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 363 d~--~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++ ..+|+++.++|||||.+++.++..
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 64 689999999999999999998765
No 29
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.47 E-value=1.7e-13 Score=138.45 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=87.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..+++.+. ..++++|+|+.+++.|+++ ++. +.+.++|+..+|+++++||+|+|..+
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 347999999999999999998853 3799999999999988765 443 77888999999999999999999998
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+++. ++..+++++.++|||||+++++++.
T Consensus 124 -l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 124 -IYNI-GFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp -SCCC-CHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred -Hhhc-CHHHHHHHHHHHcCCCcEEEEEEee
Confidence 4444 6889999999999999999999864
No 30
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.47 E-value=2.4e-13 Score=135.65 Aligned_cols=101 Identities=22% Similarity=0.348 Sum_probs=88.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC--CcEEEeecccCCCCCCCCccEEEecccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 361 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl--~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~ 361 (697)
..+|||||||+|.++..+++.+. ..++++|+++.+++.|+++.. .+.+...+...+++++++||+|++..+ +++.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLA-LHYV 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESC-GGGC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecc-cccc
Confidence 47999999999999999998853 279999999999999988753 467788888889998899999999988 6666
Q ss_pred ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 362 QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 362 ~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++...+|+++.++|||||+++++++.
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 78889999999999999999999874
No 31
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.47 E-value=8.8e-14 Score=140.00 Aligned_cols=102 Identities=15% Similarity=0.179 Sum_probs=87.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
...+|||||||+|.++..+++.+ ...++++|+|+.+++.|+++. ..+.+.+.+...+++++++||+|+|..+ ++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWT-AI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESC-GG
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcch-hh
Confidence 45799999999999999998875 346999999999999998875 3466788888899999999999999998 55
Q ss_pred cc--ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 360 WD--QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 360 ~~--~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+. ++...+|+++.++|||||++++.++.
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 55 34678999999999999999999863
No 32
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.47 E-value=2.4e-13 Score=134.47 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=83.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----C------CcEEEeecccCCCCCCCCccEEEe
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 353 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l------~~~~~~~da~~LPfpd~sFDlV~~ 353 (697)
..+|||||||+|.++..+++.+ ....++++|+++.+++.|+++. + .+.+.++++..+++++++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 4799999999999999999874 3357999999999999998762 2 577788888778887789999999
Q ss_pred ccccccccccH--HHHHHHHHHhccCCeEEEEEeC
Q 005417 354 ARCGVDWDQKD--GILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 354 ~~~llh~~~d~--~~~L~El~RvLKPGG~Lvis~p 386 (697)
..+ +++.+++ ..+++++.++|||||+++++..
T Consensus 109 ~~~-l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 109 IEV-IEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp ESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHH-HHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 998 5555554 6899999999999997776544
No 33
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.47 E-value=1.2e-13 Score=149.81 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=91.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc---------C----CCcEEEeecccCC------CC
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------G----LPAMIGSFASKQL------PY 343 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er---------g----l~~~~~~~da~~L------Pf 343 (697)
++.+|||||||+|.++..+++.......++++|+|+.|++.|+++ | .++.+..+++..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 457999999999999999988632345799999999999999876 4 4678888888887 99
Q ss_pred CCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 344 PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 344 pd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++++||+|+++.+ +++.+++..+|+++.|+|||||+|+++++..
T Consensus 163 ~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 163 PDSSVDIVISNCV-CNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCEEEEEEccc-hhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 9999999999988 7777889999999999999999999987644
No 34
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.46 E-value=1e-13 Score=138.29 Aligned_cols=105 Identities=18% Similarity=0.212 Sum_probs=88.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
+..+|||||||+|.++..+++.. +...++++|+|+.+++.|+++.. ++.+.++|...++++ ++||+|+|..+ ++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~-l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALS-IH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESC-GG
T ss_pred CCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCc-cc
Confidence 45899999999999999999873 34679999999999999987632 577888899999988 89999999998 55
Q ss_pred ccccHH--HHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 360 WDQKDG--ILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 360 ~~~d~~--~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
+.+++. .+|+++.++|||||+++++++....
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 555554 5999999999999999999876543
No 35
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.46 E-value=3.1e-13 Score=133.57 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=83.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----C------CcEEEeecccCCCCCCCCccEEEe
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 353 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l------~~~~~~~da~~LPfpd~sFDlV~~ 353 (697)
..+|||||||+|.++..+++.+ ....++++|+|+.+++.|+++. + .+.+.++++..+++++++||+|+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 4799999999999999999875 3367999999999999998752 1 577888888888888889999999
Q ss_pred ccccccccccH--HHHHHHHHHhccCCeEEEEEe
Q 005417 354 ARCGVDWDQKD--GILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 354 ~~~llh~~~d~--~~~L~El~RvLKPGG~Lvis~ 385 (697)
..+ +++.+++ ..+++++.++|||||++++..
T Consensus 109 ~~~-l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 109 IEV-IEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp ESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHH-HHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 998 5555554 689999999999999666544
No 36
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.46 E-value=5.8e-14 Score=145.99 Aligned_cols=104 Identities=15% Similarity=0.090 Sum_probs=78.8
Q ss_pred CCCEEEEeCCCCchHHHHH----hhcCCcee--EEEEecCCHHHHHHHHHc-----CCC-c--EEEeecccCCC------
Q 005417 283 GVRTILDIGCGYGSFGAHL----FSKELLTM--CIANYEASGSQVQLTLER-----GLP-A--MIGSFASKQLP------ 342 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~L----a~~g~~~~--sV~gvD~S~~ml~~A~er-----gl~-~--~~~~~da~~LP------ 342 (697)
+..+|||||||+|.++..+ +.+. ... .++++|+|+.|++.|+++ +++ + .+..++++.++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 4579999999999876543 3322 223 349999999999988765 222 2 23444554443
Q ss_pred CCCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 343 YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 343 fpd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++++||+|+|..+ +||.+|+..+|++++|+|||||+|++..+..
T Consensus 131 ~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQM-LYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESC-GGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeee-eeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 67889999999998 7888899999999999999999999987643
No 37
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.46 E-value=5.5e-13 Score=131.91 Aligned_cols=103 Identities=27% Similarity=0.343 Sum_probs=88.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----C------CcEEEeecccCCCCCCCCccEEEe
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLHC 353 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l------~~~~~~~da~~LPfpd~sFDlV~~ 353 (697)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++. + .+.+...+...+++++++||+|++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 4789999999999999999884 46999999999999998753 2 356778899999999999999999
Q ss_pred ccccccccccHH---HHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 354 ARCGVDWDQKDG---ILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 354 ~~~llh~~~d~~---~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
..+ +++.+++. .+|+++.++|||||++++.++....
T Consensus 108 ~~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 108 QAF-LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp ESC-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred cch-hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 988 66666666 8999999999999999999876543
No 38
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.46 E-value=1.6e-13 Score=141.42 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=88.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC-CCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LP-fpd~sFDlV~~~~~ 356 (697)
+.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++ ++ .+.+..++...++ +++++||+|+|..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 5799999999999999999884 4689999999999998865 33 4667888988888 78899999999988
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++.+++..+|+++.++|||||++++.++..
T Consensus 146 -l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 146 -LEWVADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp -GGGCSCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred -hhcccCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 6667888999999999999999999998754
No 39
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.45 E-value=2.8e-13 Score=139.37 Aligned_cols=99 Identities=10% Similarity=-0.016 Sum_probs=82.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------------------CCcEEEeecccCC
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------------LPAMIGSFASKQL 341 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------------------l~~~~~~~da~~L 341 (697)
..+|||+|||+|..+..|+++|. .|+|+|+|+.|++.|+++. .++.+.++|+..+
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 47999999999999999999874 5999999999999997542 3567888999999
Q ss_pred CCCC-CCccEEEeccccccccc-cHHHHHHHHHHhccCCeEEEEEe
Q 005417 342 PYPS-LSFDMLHCARCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 342 Pfpd-~sFDlV~~~~~llh~~~-d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
++++ ++||+|++..++.+..+ +...+++++.|+|||||+|++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8864 89999999887444432 34579999999999999997554
No 40
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.45 E-value=4.4e-13 Score=136.40 Aligned_cols=99 Identities=17% Similarity=0.220 Sum_probs=86.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecc-cccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCAR-CGVDWD 361 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~-~llh~~ 361 (697)
+..+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++...+.+.++|+..+++ +++||+|+|.. + +++.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~-l~~~ 124 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSS-IGHL 124 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTG-GGGS
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCch-hhhc
Confidence 34799999999999999999885 36899999999999999987788888899999988 67999999998 6 5555
Q ss_pred c---cHHHHHHHHHHhccCCeEEEEEeC
Q 005417 362 Q---KDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 362 ~---d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
. +...+|+++.++|||||+|++...
T Consensus 125 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 125 AGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 3 456789999999999999999754
No 41
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.45 E-value=2.4e-13 Score=141.44 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=86.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-------CCCcEEEeecccCCCCCC------CCcc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------GLPAMIGSFASKQLPYPS------LSFD 349 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-------gl~~~~~~~da~~LPfpd------~sFD 349 (697)
+..+|||||||+|.++..+++.......++++|+|+.|++.|+++ ..++.+.++++..+++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 458999999999999999996311356799999999999999875 457788899999999887 8999
Q ss_pred EEEeccccccccccHHHHHHHHHHhccCCeEEEEEe
Q 005417 350 MLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 350 lV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
+|+|..+ +||. ++..++.++.++|||||+|++.+
T Consensus 116 ~V~~~~~-l~~~-~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 116 MITAVEC-AHWF-DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEESC-GGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeHhhH-HHHh-CHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999998 6666 88999999999999999999843
No 42
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.44 E-value=5.5e-14 Score=153.28 Aligned_cols=102 Identities=19% Similarity=0.237 Sum_probs=87.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE---EeecccCCCCCCCCccEEEecccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI---GSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~---~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
+..+|||||||+|.++..+++++. .++++|+|+.|++.|++++++... ...+...+|+++++||+|++..+ ++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v-l~ 182 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANT-LC 182 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESC-GG
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECCh-HH
Confidence 347999999999999999998864 689999999999999998765542 23455667788899999999998 66
Q ss_pred ccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 360 WDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 360 ~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+.+++..+|++++++|||||++++.++..
T Consensus 183 h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 211 (416)
T 4e2x_A 183 HIPYVQSVLEGVDALLAPDGVFVFEDPYL 211 (416)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 67789999999999999999999998753
No 43
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.44 E-value=3.3e-13 Score=138.13 Aligned_cols=104 Identities=22% Similarity=0.283 Sum_probs=90.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
+..+|||||||+|.++..+++.+ +...++++|+++.+++.|+++ ++ ++.+...|...+++++++||+|++..+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~- 114 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV- 114 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC-
T ss_pred CCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech-
Confidence 45799999999999999999873 346799999999999988765 33 577888899999999999999999998
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++.+++..++.++.++|||||++++.++..
T Consensus 115 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred hhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 6677888899999999999999999988643
No 44
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.44 E-value=1.7e-13 Score=134.74 Aligned_cols=100 Identities=20% Similarity=0.249 Sum_probs=84.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc-
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ- 362 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~- 362 (697)
..+|||||||+|.++..+++.+ ..++++|+|+.+++.++++. .+.+..++...++ ++++||+|+|..+ +++.+
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~-l~~~~~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHAC-LLHVPR 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSC-GGGSCH
T ss_pred CCcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCc-hhhcCH
Confidence 4799999999999999999885 36899999999999998873 3445566788888 7889999999998 44454
Q ss_pred -cHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 363 -KDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 363 -d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+...+|+++.++|||||+++++.+...
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 567899999999999999999976543
No 45
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=6.4e-13 Score=131.20 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=85.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
..+|||||||+|.++..+++.+. .++++|+++.+++.|+++ +..+.+.+.|...+++++++||+|+|..++.+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 57999999999999999998853 799999999999988765 35678888899889988889999999977322
Q ss_pred -ccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 360 -WDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 360 -~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+.++...+++++.++|||||.+++.++.
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 2345678999999999999999998874
No 46
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.43 E-value=4.4e-13 Score=130.96 Aligned_cols=102 Identities=21% Similarity=0.167 Sum_probs=84.1
Q ss_pred CCEEEEeCCCCchHH-HHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFG-AHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a-~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||+|||+|.++ ..+++.+ ..++++|+|+.+++.|+++ +.++.+.++++..+++++++||+|+|..++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 479999999999984 4555543 4699999999999888754 4567788889999999999999999998844
Q ss_pred ccc-ccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 359 DWD-QKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 359 h~~-~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
|+. ++...+++++.++|||||++++.++..
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 442 556789999999999999999998754
No 47
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.43 E-value=6.1e-13 Score=133.10 Aligned_cols=128 Identities=15% Similarity=0.018 Sum_probs=95.3
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC------CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL------PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl------~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++.. .+.+.++|...++ ++++||+|+|..+ +
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~-l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVF-F 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESS-T
T ss_pred CCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChh-h
Confidence 599999999999999998764 569999999999999987642 3678888888877 4569999999988 5
Q ss_pred cccc--cHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEee
Q 005417 359 DWDQ--KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 419 (697)
Q Consensus 359 h~~~--d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~ 419 (697)
++.+ +...+++++.++|||||++++.+.......... .....-+.+..+.+..+|+.+.
T Consensus 143 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 143 CAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGP--PYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp TTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCS--SCCCCHHHHHHHHGGGTEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCC--CccCCHHHHHHHHHHcCCeEEE
Confidence 5554 667899999999999999999876543210000 0001224455666777777653
No 48
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.43 E-value=5.3e-13 Score=138.18 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=88.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
+..+|||||||+|.++..+++.......++++|+|+.+++.|+++ +.++.+.+.|+..++++ ++||+|+|..+ +
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~-l 99 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAF-L 99 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESC-G
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECCh-h
Confidence 458999999999999999998732236799999999999988765 33577888899999885 59999999998 6
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++.+++..+++++.++|||||++++.++.
T Consensus 100 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 66788899999999999999999999986
No 49
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.43 E-value=9.1e-13 Score=128.41 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=85.4
Q ss_pred EEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccccc-
Q 005417 286 TILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW- 360 (697)
Q Consensus 286 ~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~- 360 (697)
+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ +..+.+.++++..+++++++||+|+|..+ |+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCC
T ss_pred CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCC
Confidence 89999999999999999875 3799999999999988765 55778888899889998899999999643 33
Q ss_pred cccHHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 361 DQKDGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 361 ~~d~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
..+...++.++.++|||||++++.++....
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 245678999999999999999999876544
No 50
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.43 E-value=3.6e-13 Score=135.49 Aligned_cols=103 Identities=14% Similarity=0.119 Sum_probs=87.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-----CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-----PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-----~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
+..+|||||||+|.++..+++.+ ...++++|+++.+++.|+++.. .+.+...++..+++++++||+|+|..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~- 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV- 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC-
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch-
Confidence 35799999999999999998875 4579999999999999987642 356778888889998889999999988
Q ss_pred ccccccH--HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKD--GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~--~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++.+++ ..+|+++.++|||||++++.++..
T Consensus 156 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 156 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 5555554 489999999999999999988643
No 51
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.43 E-value=8.4e-13 Score=138.50 Aligned_cols=103 Identities=18% Similarity=0.154 Sum_probs=88.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..++++. ...++++|+++.+++.|+++ ++ ++.+..+|+..+|+++++||+|+|..+
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 45799999999999999999872 25699999999999988764 44 477888999999999999999999998
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+++. +...+|+++.++|||||++++.++...
T Consensus 195 -l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 195 -TMYV-DLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp -GGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred -hhhC-CHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 5555 488999999999999999999886543
No 52
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.43 E-value=5.6e-13 Score=130.93 Aligned_cols=101 Identities=20% Similarity=0.233 Sum_probs=83.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC---CCCC-CCccEEEecccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPS-LSFDMLHCARCGVD 359 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L---Pfpd-~sFDlV~~~~~llh 359 (697)
+.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ ....+...+...+ ++.. ++||+|+|..+ ++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~-l~ 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFA-LL 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC-CC
T ss_pred CCEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECch-hh
Confidence 3899999999999999999885 3689999999999999987 4455665665555 5544 45999999988 55
Q ss_pred ccccHHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 360 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 360 ~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
..++..+++++.++|||||+++++++.+..
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 677889999999999999999999986543
No 53
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.42 E-value=7.7e-13 Score=131.31 Aligned_cols=96 Identities=24% Similarity=0.297 Sum_probs=85.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 363 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~d 363 (697)
..+|||||||+|.++..+++. +++|+++.+++.++++ .+.+...+...+++++++||+|++..+ +++.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTT-ICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESC-GGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcch-HhhccC
Confidence 478999999999999998764 8999999999999987 566777888889998899999999998 666788
Q ss_pred HHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 364 DGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 364 ~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+..+|.++.++|+|||+++++++...
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 89999999999999999999987654
No 54
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.42 E-value=7.6e-13 Score=131.70 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=86.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccc-
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD- 361 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~- 361 (697)
+..+|||||||+|.++..+++.+. .++++|+|+.|++.|+++..++.+...++..+++ +++||+|+|....+++.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcC
Confidence 347999999999999999998853 6999999999999999887678888889888887 67999999766336655
Q ss_pred --ccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 362 --QKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 362 --~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++...+|+++.++|||||+++++++..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 344689999999999999999987643
No 55
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.42 E-value=1e-12 Score=126.93 Aligned_cols=98 Identities=17% Similarity=0.289 Sum_probs=83.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.+ ..++++|+++.+++.++++ ++ ++.+..+|...+++ +++||+|++..+ +
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~-l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVV-L 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESC-G
T ss_pred CCeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcch-h
Confidence 3799999999999999999884 3699999999999888754 44 57788889888888 789999999998 4
Q ss_pred cccc--cHHHHHHHHHHhccCCeEEEEEeC
Q 005417 359 DWDQ--KDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 359 h~~~--d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
++.+ +...+++++.++|||||++++.++
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 5444 567899999999999999888764
No 56
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.42 E-value=7.3e-13 Score=129.26 Aligned_cols=104 Identities=24% Similarity=0.293 Sum_probs=87.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
...+|||||||+|.++..+++.+.. .++++|+++.+++.|+++. ..+.+.++++..+++++++||+|++..++.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 3478999999999999999988642 7999999999999998764 3567788898889999899999999877432
Q ss_pred c--------------cccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 360 W--------------DQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 360 ~--------------~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
. ..+...++.++.++|||||.+++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 2 1245689999999999999999999864
No 57
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=1.6e-12 Score=124.35 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=87.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccc-
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD- 361 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~- 361 (697)
+..+|||||||+|.++..+++.+ ..++++|+++.+++.++++..++.+...+...+++++++||+|++....+++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 34799999999999999999884 46999999999999999887678888889888888889999999983335555
Q ss_pred -ccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 362 -QKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 362 -~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++...++.++.++|+|||.+++..+..
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 334689999999999999999987654
No 58
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.41 E-value=7.4e-13 Score=131.90 Aligned_cols=116 Identities=21% Similarity=0.274 Sum_probs=92.4
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeec
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFA 337 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~d 337 (697)
.+.+.+.+.+.... .+..+|||||||+|.++..+++.+ ..++++|+++.|++.|+++ +..+.+.+.+
T Consensus 22 ~~~~~~~~~l~~~~------~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d 92 (246)
T 1y8c_A 22 KWSDFIIEKCVENN------LVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHTTT------CCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC
T ss_pred HHHHHHHHHHHHhC------CCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecc
Confidence 34445555554321 134799999999999999999885 4699999999999988765 3467888889
Q ss_pred ccCCCCCCCCccEEEecc-cccccc---ccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 338 SKQLPYPSLSFDMLHCAR-CGVDWD---QKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 338 a~~LPfpd~sFDlV~~~~-~llh~~---~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+..++++ ++||+|+|.. + +++. ++...+|+++.++|||||+++++.+.+
T Consensus 93 ~~~~~~~-~~fD~v~~~~~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 93 ISNLNIN-RKFDLITCCLDS-TNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp GGGCCCS-CCEEEEEECTTG-GGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cccCCcc-CCceEEEEcCcc-ccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 9888887 7999999998 7 5555 456789999999999999999987753
No 59
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.40 E-value=1.6e-12 Score=124.36 Aligned_cols=127 Identities=17% Similarity=0.202 Sum_probs=94.3
Q ss_pred ccccccccccch--hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH
Q 005417 249 SFRSASLIFDGV--EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE 326 (697)
Q Consensus 249 ~F~~~~~~yd~~--~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~e 326 (697)
.|......|... ....+.+.+.+... +..+|||+|||+|.++..+++. ...++++|+++.+++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~ 92 (194)
T 1dus_A 24 KFKTDSGVFSYGKVDKGTKILVENVVVD--------KDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKE 92 (194)
T ss_dssp EEEEETTSTTTTSCCHHHHHHHHHCCCC--------TTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCcCCccccchHHHHHHHHcccC--------CCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHH
Confidence 444444444322 23445555555433 3479999999999999999987 3579999999999998876
Q ss_pred c----CCC---cEEEeecccCCCCCCCCccEEEeccccccc-cccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 327 R----GLP---AMIGSFASKQLPYPSLSFDMLHCARCGVDW-DQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 327 r----gl~---~~~~~~da~~LPfpd~sFDlV~~~~~llh~-~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+ ++. +.+...+... ++++++||+|++... +++ ..+...+++++.++|+|||.+++.++..
T Consensus 93 ~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~-~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 93 NIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPP-IRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCC-STTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHHcCCCccceEEEECchhc-ccccCCceEEEECCC-cccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 5 444 6777777665 455779999999877 554 3455789999999999999999998865
No 60
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.40 E-value=1.2e-12 Score=134.94 Aligned_cols=102 Identities=15% Similarity=0.149 Sum_probs=83.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ .+.+...|...+| ++||+|+|..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~ 138 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGA 138 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCc
Confidence 34799999999999999998542 23799999999999998875 32 5667777887776 78999999998
Q ss_pred ccccc-ccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 357 GVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 357 llh~~-~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+.|+. ++...+|+++.++|||||.+++.++...
T Consensus 139 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 139 FEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp GGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred hhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 55543 5678999999999999999999987643
No 61
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.39 E-value=2e-12 Score=124.47 Aligned_cols=103 Identities=13% Similarity=0.054 Sum_probs=77.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC-CCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP-YPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LP-fpd~sFDlV~~~~~ 356 (697)
...+|||+|||+|.++..+++. ...|+++|+|+.|++.|+++ ++ ++.+.+.+...++ +.+++||+|+++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 4579999999999999999987 35799999999999988764 43 4566666666643 55789999998743
Q ss_pred cccc--------cccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~--------~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.++. ..+...++.++.++|||||++++.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 2332 1333578999999999999999987643
No 62
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.38 E-value=6.2e-13 Score=133.69 Aligned_cols=102 Identities=14% Similarity=0.076 Sum_probs=81.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CCcEEEeecccCC--CCCCCCccEEEe-cc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQL--PYPSLSFDMLHC-AR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~~~~~~~da~~L--Pfpd~sFDlV~~-~~ 355 (697)
...+|||||||+|.++..+++.+ ...++++|+|+.|++.|+++. .++.+.++++..+ ++++++||+|++ .+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 34799999999999999998764 347999999999999998753 4567788888888 899999999999 44
Q ss_pred cc-ccc--cccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 356 CG-VDW--DQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 356 ~l-lh~--~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.. .+. ..+...++++++|+|||||+|++.+.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 42 111 12234689999999999999998764
No 63
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.38 E-value=1.7e-12 Score=135.18 Aligned_cols=101 Identities=14% Similarity=0.156 Sum_probs=83.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhc-CCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~-g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~ 355 (697)
+..+|||||||+|.++..+++. + ..++++|+|+.+++.|+++ ++ .+.+...|...+ +++||+|++..
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~ 145 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG 145 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEES
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcc
Confidence 3479999999999999999987 4 5699999999999988765 44 366777787766 68999999999
Q ss_pred ccccccccH---------HHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 356 CGVDWDQKD---------GILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 356 ~llh~~~d~---------~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
+ +++.+++ ..+++++.++|||||++++.++....
T Consensus 146 ~-~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 146 A-FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp C-GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred h-HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 8 5555443 68999999999999999999876543
No 64
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.38 E-value=9.3e-13 Score=137.03 Aligned_cols=101 Identities=15% Similarity=0.177 Sum_probs=86.2
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC--------CCcEEEeecccCCCCCCCCccEEEeccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--------LPAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg--------l~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
.+|||||||+|.++..|++.+ ..++++|+|+.+++.|+++. .++.+.++|+..+++ +++||+|+|...
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 589999999999999999885 45899999999999988652 357788999999988 679999998766
Q ss_pred ccccccc--HHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 357 GVDWDQK--DGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 357 llh~~~d--~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.+++.+. ...+|+++.++|||||+|++.++...
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 5776653 46899999999999999999998764
No 65
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.38 E-value=6.8e-13 Score=139.99 Aligned_cols=102 Identities=13% Similarity=0.140 Sum_probs=77.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-------cEEEeecc------cCC--CC
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-------AMIGSFAS------KQL--PY 343 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-------~~~~~~da------~~L--Pf 343 (697)
...+|||||||+|..+..++..+ ...|+|+|+|+.|++.|+++ +.. +.+.+.++ ..+ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 35799999999998666665553 34699999999999999875 222 33444544 323 46
Q ss_pred CCCCccEEEecccccccc---ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 344 PSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 344 pd~sFDlV~~~~~llh~~---~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++++||+|+|.++ +|+. .+...+|+++.|+|||||+|+++++.
T Consensus 126 ~~~~FD~V~~~~~-lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 YFGKFNIIDWQFA-IHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CSSCEEEEEEESC-GGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCeeEEEECch-HHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7789999999988 5543 34578999999999999999999885
No 66
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.38 E-value=1.6e-12 Score=127.86 Aligned_cols=101 Identities=19% Similarity=0.256 Sum_probs=86.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccC--CCCCCCCccEEEeccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ--LPYPSLSFDMLHCARCGVDW 360 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~--LPfpd~sFDlV~~~~~llh~ 360 (697)
+..+|||||||+|.++..+++.+ ..++++|+++.+++.++++.. .+...+... +++++++||+|++..+ +++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~-l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDV-LEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESC-GGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECCh-hhh
Confidence 45799999999999999999884 579999999999999987653 455667665 6788899999999988 666
Q ss_pred cccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 361 DQKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 361 ~~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.+++..++.++.++|||||+++++++...
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 77888999999999999999999987653
No 67
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.37 E-value=1.4e-12 Score=136.48 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=86.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CC--cEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LP--AMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~--~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..++........++++|+++.+++.|+++. +. +.+.++|+..++++ ++||+|+|..+
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 4579999999999999999643335568999999999999998753 22 67888999999988 89999999988
Q ss_pred cccccccHHH---HHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDWDQKDGI---LLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d~~~---~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++.+++.. +++++.++|||||++++++...
T Consensus 197 -~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 197 -NIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp -GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred -hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 555555544 7999999999999999998654
No 68
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.37 E-value=1e-12 Score=133.07 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=78.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccC--CCCCCCCccEEEec--
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQ--LPYPSLSFDMLHCA-- 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~--LPfpd~sFDlV~~~-- 354 (697)
.+.+|||||||+|..+..++++. ..+++++|+|+.|++.|+++ +..+.+...+++. .++++++||.|++-
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 34799999999999999998874 45799999999999999865 3445566566544 35888999999752
Q ss_pred ---cccccccccHHHHHHHHHHhccCCeEEEEEe
Q 005417 355 ---RCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 355 ---~~llh~~~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
.. .++..+...++.++.|+|||||.|++..
T Consensus 138 ~~~~~-~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEE-TWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGG-GTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccc-hhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 22 3345667889999999999999998853
No 69
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.36 E-value=2.3e-12 Score=128.56 Aligned_cols=98 Identities=17% Similarity=0.247 Sum_probs=82.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEecc-ccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCAR-CGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~-~ll 358 (697)
..+|||||||+|.++..+++. ..++++|+|+.+++.|+++ +..+.+...++..++++ ++||+|+|.. + +
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~-~ 107 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDS-L 107 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTG-G
T ss_pred CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCc-h
Confidence 378999999999999999876 4799999999999988765 45677888898888877 7999999986 6 5
Q ss_pred ccc---ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWD---QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~---~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++. ++...+++++.++|||||.+++..+.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 554 34567999999999999999998764
No 70
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.36 E-value=1e-12 Score=136.05 Aligned_cols=101 Identities=20% Similarity=0.145 Sum_probs=75.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCC--------------------------------
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLP-------------------------------- 330 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~-------------------------------- 330 (697)
.+.+|||||||+|.++..++.. ....|+++|+|+.|++.|+++...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 3579999999999955444433 234799999999999988763100
Q ss_pred ---cEEEeecccC-CCC-----CCCCccEEEeccccccc----cccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 331 ---AMIGSFASKQ-LPY-----PSLSFDMLHCARCGVDW----DQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 331 ---~~~~~~da~~-LPf-----pd~sFDlV~~~~~llh~----~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
..+..+|+.. +|+ ++++||+|+|+.+ +++ .+++..+|+++.|+|||||+|++...
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhh-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 2244457766 664 4567999999998 555 44678899999999999999999853
No 71
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.35 E-value=7e-13 Score=136.08 Aligned_cols=104 Identities=16% Similarity=0.036 Sum_probs=78.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC------C---------------------------
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------L--------------------------- 329 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg------l--------------------------- 329 (697)
++.+|||||||+|.++..++..+ ..+|+++|+|+.|++.|+++. .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 45789999999999888777765 347999999999999887531 0
Q ss_pred -Cc-EEEeecccC-CCC---CCCCccEEEecccccccc---ccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 330 -PA-MIGSFASKQ-LPY---PSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 330 -~~-~~~~~da~~-LPf---pd~sFDlV~~~~~llh~~---~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.+ .+..+|... .|+ ..++||+|+|+.++++.. ++...+|++++|+|||||+|++++...
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~ 200 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLR 200 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 01 155667666 344 367999999999954433 344689999999999999999997543
No 72
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.34 E-value=5.2e-12 Score=130.21 Aligned_cols=98 Identities=13% Similarity=0.232 Sum_probs=83.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
..+|||||||+|.++..+++.+. .++++|+++.+++.|+++ ++++.+.+.|+..+++ +++||+|+|..+ ++
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~-~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVV-FM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSS-GG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccc-hh
Confidence 47999999999999999999853 699999999999888754 5578888889988887 789999999998 45
Q ss_pred ccc--cHHHHHHHHHHhccCCeEEEEEeC
Q 005417 360 WDQ--KDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 360 ~~~--d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
+.+ +...+++++.++|||||++++...
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 443 345899999999999999887654
No 73
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.34 E-value=2.2e-11 Score=119.38 Aligned_cols=99 Identities=15% Similarity=0.009 Sum_probs=80.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.+ ....++++|+++.+++.|+++ ++ ++.+...+........++||+|++..+ .
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~ 118 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS-G 118 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC-T
T ss_pred CCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC-C
Confidence 4799999999999999999884 346799999999999988764 43 466777777554444468999999876 3
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+ +...++.++.++|||||++++..+.
T Consensus 119 ~---~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 119 G---MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp T---CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred c---CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2 6778999999999999999998764
No 74
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.34 E-value=5.3e-12 Score=127.18 Aligned_cols=101 Identities=20% Similarity=0.296 Sum_probs=83.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
+..+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++ +.++.+.++|+..++++ ++||+|+|..+.+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTI 116 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCch
Confidence 34799999999999999999885 3689999999999988754 56778888899888876 6899999875444
Q ss_pred ccc--ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWD--QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~--~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++. ++...+++++.++|||||.+++..+.
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 443 34568999999999999999998764
No 75
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.34 E-value=4.5e-12 Score=132.79 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=84.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ .+.+...|...+| ++||+|++..+
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~ 164 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEA 164 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeCh
Confidence 45799999999999999999872 24799999999999998875 33 3667777887775 78999999998
Q ss_pred ccccc-ccHHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 357 GVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 357 llh~~-~d~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
+.|.. ++...+++++.++|||||++++.++....
T Consensus 165 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 165 FEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 44443 56789999999999999999999986644
No 76
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.33 E-value=3.1e-12 Score=131.46 Aligned_cols=102 Identities=20% Similarity=0.258 Sum_probs=85.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCC-CCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPY-PSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPf-pd~sFDlV~~~~ 355 (697)
+..+|||||||+|.++..+++.+ ...++++|+|+.+++.|+++ +. ++.+.++++..+++ ++++||+|+|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 34799999999999999988874 34799999999999998865 22 35678888888888 688999999998
Q ss_pred ccccc----cccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 356 CGVDW----DQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 356 ~llh~----~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+ +|+ .++...+|+++.++|||||++++.++.
T Consensus 142 ~-l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 142 S-FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp C-GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred h-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 8 444 355678999999999999999999875
No 77
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.33 E-value=1.9e-12 Score=130.79 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=82.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC--C------------------------------
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--P------------------------------ 330 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl--~------------------------------ 330 (697)
++.+|||||||+|.++..+++.+. ..|+++|+|+.|++.|+++.. +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 457899999999999999988753 579999999999999876521 1
Q ss_pred --c-EEEeecccCCC-CCC---CCccEEEecccccc---ccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 331 --A-MIGSFASKQLP-YPS---LSFDMLHCARCGVD---WDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 331 --~-~~~~~da~~LP-fpd---~sFDlV~~~~~llh---~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+ .+..++...++ +++ ++||+|+|..++.+ +.++...+|.++.++|||||+|++.+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 4 67777877754 355 89999999998442 3345678999999999999999998854
No 78
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.33 E-value=2.9e-12 Score=134.34 Aligned_cols=103 Identities=22% Similarity=0.355 Sum_probs=84.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC------------CCcEEEeecccCCC----CC--
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------------LPAMIGSFASKQLP----YP-- 344 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg------------l~~~~~~~da~~LP----fp-- 344 (697)
...+|||||||+|.++..+++.+ ...++++|+|+.|++.|+++. .++.+.++|+..++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 34799999999999999998753 457999999999999887652 14567888888876 54
Q ss_pred CCCccEEEecccccccc-cc---HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 345 SLSFDMLHCARCGVDWD-QK---DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 345 d~sFDlV~~~~~llh~~-~d---~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++||+|+|..+ +||. .+ ...+|.++.++|||||+|+++++..
T Consensus 112 ~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 459999999998 7766 33 4689999999999999999998853
No 79
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=2.2e-12 Score=129.70 Aligned_cols=104 Identities=12% Similarity=0.038 Sum_probs=85.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC--CcEEEeecccCCCCCC-----CCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPS-----LSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl--~~~~~~~da~~LPfpd-----~sFDlV~~~~ 355 (697)
...+|||||||+|.++..|++.+. +|+++|+|+.|++.|+++.. ++.+.++|+..+++.. ..||+|++..
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 347899999999999999998864 68999999999999988743 5677788877765432 3499999998
Q ss_pred ccccccc--cHHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 356 CGVDWDQ--KDGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 356 ~llh~~~--d~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
+ +|+.+ +...+++++.++|||||++++.++....
T Consensus 133 ~-~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 133 G-FHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp S-STTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred h-hhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 8 66665 5678999999999999999999876543
No 80
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.32 E-value=3.7e-12 Score=132.95 Aligned_cols=102 Identities=16% Similarity=0.238 Sum_probs=81.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------------------------------
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------------------------------- 328 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------------------------------- 328 (697)
...+|||||||+|.++..++++. ....|+++|+++.|++.|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 45799999999999999999872 3457999999999999998752
Q ss_pred -----------------------------CCcEEEeecccCCC-----CCCCCccEEEeccccccccc------cHHHHH
Q 005417 329 -----------------------------LPAMIGSFASKQLP-----YPSLSFDMLHCARCGVDWDQ------KDGILL 368 (697)
Q Consensus 329 -----------------------------l~~~~~~~da~~LP-----fpd~sFDlV~~~~~llh~~~------d~~~~L 368 (697)
.++.+.++|....+ +.+++||+|+|..+ ++|.. +...++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v-l~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL-TKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC-HHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH-HHHhhhcCCHHHHHHHH
Confidence 13556666665443 57789999999988 44432 456899
Q ss_pred HHHHHhccCCeEEEEEeC
Q 005417 369 LEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 369 ~El~RvLKPGG~Lvis~p 386 (697)
++++++|||||+|++...
T Consensus 204 ~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 999999999999999754
No 81
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.31 E-value=3.3e-12 Score=130.33 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=82.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHH------HHHHHHHc----CC--CcEEEeec---ccCCCCCCCCc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGS------QVQLTLER----GL--PAMIGSFA---SKQLPYPSLSF 348 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~------ml~~A~er----gl--~~~~~~~d---a~~LPfpd~sF 348 (697)
..+|||||||+|.++..++++......++++|+|+. +++.|+++ ++ ++.+...| ...+|+++++|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 479999999999999999987322357999999987 88887765 22 45667776 56677888999
Q ss_pred cEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 349 DMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 349 DlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
|+|+|..+ +++.+++..+++.+.++++|||++++.+...
T Consensus 124 D~v~~~~~-l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 124 DRVVLAHS-LWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp SEEEEESC-GGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred EEEEEccc-hhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 99999998 5666777777777777777899999998654
No 82
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.31 E-value=5.1e-12 Score=128.91 Aligned_cols=99 Identities=22% Similarity=0.347 Sum_probs=85.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
...+|||||||+|.++..+++.. ....++++|+|+.+++.|++++..+.+...+...+|+++++||+|++..+ .
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~---- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-P---- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-C----
T ss_pred CCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-h----
Confidence 34799999999999999998862 23579999999999999999887788888899999999999999998765 1
Q ss_pred cHHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 363 KDGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 363 d~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
.++.++.++|||||.+++.++....
T Consensus 159 ---~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 159 ---CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp ---CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred ---hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 3589999999999999999986543
No 83
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.31 E-value=6.3e-12 Score=130.40 Aligned_cols=101 Identities=11% Similarity=0.004 Sum_probs=78.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCC-----CCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPY-----PSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPf-----pd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..|++++ ..|+++|+|+.|++.|+++.... +...+...++. .+++||+|+|+.++.
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred cCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhhhhH
Confidence 4799999999999999999985 46999999999999998874322 22334444433 257899999998855
Q ss_pred ccc-ccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 359 DWD-QKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 359 h~~-~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
|+. ++...++.++.++| |||.++++.....
T Consensus 122 ~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 122 RFTTEEARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp GSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred hCCHHHHHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 554 33467999999999 9999999986543
No 84
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.30 E-value=1e-11 Score=120.42 Aligned_cols=120 Identities=15% Similarity=0.176 Sum_probs=90.5
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEe
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGS 335 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~ 335 (697)
....+.+.+.+..... ....+|||+|||+|.++..+++.+ ...|+++|+++.|++.|+++ ++ ++.+.+
T Consensus 27 ~~~~~~l~~~l~~~~~-----~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~ 99 (189)
T 3p9n_A 27 DRVRESLFNIVTARRD-----LTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEALGLSGATLRR 99 (189)
T ss_dssp HHHHHHHHHHHHHHSC-----CTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHHHHhccC-----CCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 4444555555543110 134799999999999999888774 34699999999999988764 43 567788
Q ss_pred ecccCCC--CCCCCccEEEecccccccc-ccHHHHHHHHHH--hccCCeEEEEEeCCC
Q 005417 336 FASKQLP--YPSLSFDMLHCARCGVDWD-QKDGILLLEVDR--VLKPGGYFVWTSPLT 388 (697)
Q Consensus 336 ~da~~LP--fpd~sFDlV~~~~~llh~~-~d~~~~L~El~R--vLKPGG~Lvis~p~~ 388 (697)
+|+..++ +++++||+|++... +++. ++...++.++.+ +|||||++++..+..
T Consensus 100 ~d~~~~~~~~~~~~fD~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 100 GAVAAVVAAGTTSPVDLVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp SCHHHHHHHCCSSCCSEEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred ccHHHHHhhccCCCccEEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 8877664 45789999999877 5543 566789999999 999999999987643
No 85
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.29 E-value=4.5e-12 Score=124.85 Aligned_cols=110 Identities=19% Similarity=0.227 Sum_probs=86.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
+..+|||||||+|.++..++ ..++++|+++. .+.+..+++..+|+++++||+|+|..+ +|+ .
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~-~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------DPRVTVCDMAQVPLEDESVDVAVFCLS-LMG-T 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------STTEEESCTTSCSCCTTCEEEEEEESC-CCS-S
T ss_pred CCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------CceEEEeccccCCCCCCCEeEEEEehh-ccc-c
Confidence 34789999999999998884 35899999986 455677788889999999999999988 564 7
Q ss_pred cHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEeee
Q 005417 363 KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 420 (697)
Q Consensus 363 d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~~ 420 (697)
++..+|.++.++|+|||+++++++.... ..-+.+..+.+..+++.+..
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRF----------EDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGC----------SCHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCC----------CCHHHHHHHHHHCCCEEEEE
Confidence 8889999999999999999999864311 12234455666677776543
No 86
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.28 E-value=1.7e-11 Score=143.35 Aligned_cols=103 Identities=17% Similarity=0.207 Sum_probs=87.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----------C-CCcEEEeecccCCCCCCCCccEEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------G-LPAMIGSFASKQLPYPSLSFDMLH 352 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----------g-l~~~~~~~da~~LPfpd~sFDlV~ 352 (697)
..+|||||||+|.++..|++.+.....|+|+|+|+.|++.|+++ + .++.+.++|+..+++++++||+|+
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 48999999999999999998863446799999999999999762 2 246788999999999999999999
Q ss_pred eccccccccccHH--HHHHHHHHhccCCeEEEEEeCCC
Q 005417 353 CARCGVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 353 ~~~~llh~~~d~~--~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
|..+ +++.+++. .++.++.|+|||| .++++++..
T Consensus 802 ~~eV-LeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 802 CLEV-IEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EESC-GGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EeCc-hhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9998 55555554 5899999999999 889988765
No 87
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.28 E-value=5.5e-12 Score=126.09 Aligned_cols=90 Identities=19% Similarity=0.311 Sum_probs=79.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecc-cCCCCC-CCCccEEEeccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQLPYP-SLSFDMLHCARCGVDW 360 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da-~~LPfp-d~sFDlV~~~~~llh~ 360 (697)
...+|||||||+|.++..+++.+ ..++++|+|+.+++.++++..++.+.++|. +.+|++ +++||+|+|.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 34799999999999999999884 479999999999999999877788888888 678888 8999999987
Q ss_pred cccHHHHHHHHHHhccCCeEEE
Q 005417 361 DQKDGILLLEVDRVLKPGGYFV 382 (697)
Q Consensus 361 ~~d~~~~L~El~RvLKPGG~Lv 382 (697)
.++..++.++.++|||||.++
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEE
Confidence 245578999999999999999
No 88
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.28 E-value=2.2e-11 Score=115.65 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-cEEEeecc-cCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFAS-KQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da-~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++. ..+...+. +.++..+++||+|++..+
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~- 103 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGG- 103 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC--
T ss_pred CCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCc-
Confidence 4799999999999999998873 356799999999999998865 443 12554554 333433379999999987
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++ ..+++++.++|||||++++.+...
T Consensus 104 ~~~----~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 104 LTA----PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp TTC----TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred ccH----HHHHHHHHHhcCCCCEEEEEeecc
Confidence 443 579999999999999999988753
No 89
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.28 E-value=4e-11 Score=113.72 Aligned_cols=93 Identities=12% Similarity=0.188 Sum_probs=78.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||+|||+|.++..+++. ...++++|+++.+++.|+++ ++ ++.+...+... ++++++||+|++..+
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~-- 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT-- 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC--
T ss_pred CCEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc--
Confidence 379999999999999999883 46799999999999988765 33 46677777766 677789999999876
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
.+...++.++.++ |||.+++.++.
T Consensus 110 ---~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp ---SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred ---ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 5567899999999 99999999874
No 90
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.27 E-value=1.6e-11 Score=129.45 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=78.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
++.+|||||||+|.++..++.+. ....|+++|++++|++.|+++ ++ ++.+.++|+..+| +++||+|++...
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT-
T ss_pred CcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC-
Confidence 45899999999998775544331 346799999999999998865 54 5678888888775 789999998644
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.++...+++++.|+|||||+|++...
T Consensus 198 ---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 ---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 46778999999999999999999874
No 91
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.27 E-value=2e-11 Score=118.61 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=82.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC-CCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LP-fpd~sFDlV~~~~~ 356 (697)
..+|||+|||+|.++..+++.......++++|+++.+++.|+++ ++ ++.+.++|+..++ +.+++||+|++...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 47999999999999999988721234799999999999988765 33 5678888887776 66789999999865
Q ss_pred cccc--------cccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~--------~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.+.. ..+...++.++.++|||||++++.....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 3221 1133579999999999999999987543
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.27 E-value=2.6e-11 Score=120.06 Aligned_cols=101 Identities=15% Similarity=0.242 Sum_probs=82.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LP--fpd~sFDlV~~~~~ 356 (697)
..+|||||||+|.++..+++.. +...++++|+++.+++.|+++ ++ ++.+..+++..++ +++++||+|+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 4789999999999999998873 346799999999999888764 44 5678888888877 77889999999865
Q ss_pred cccccc--------cHHHHHHHHHHhccCCeEEEEEeC
Q 005417 357 GVDWDQ--------KDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 357 llh~~~--------d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
..|.. ....++.++.++|||||.+++...
T Consensus 121 -~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 121 -DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred -CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 44332 125799999999999999999865
No 93
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.26 E-value=3.2e-11 Score=131.39 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=86.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
...+|||+|||+|.++..+++.+ ..|+++|+++.+++.|+++ ++.+.+...|....+.++++||+|+|+.. +
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp-~ 308 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPP-F 308 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC-C
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCc-h
Confidence 34799999999999999999985 4799999999999888754 55678888898888887789999999977 5
Q ss_pred cc-----cccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 359 DW-----DQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 359 h~-----~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
|+ ..+...++.++.++|||||.++++....
T Consensus 309 ~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 309 HVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred hhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 55 3445689999999999999999987543
No 94
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.25 E-value=2.8e-11 Score=120.74 Aligned_cols=98 Identities=20% Similarity=0.124 Sum_probs=73.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHH----HHHHcCCCcEEEeecccC----CCCCCCCccEEEec
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ----LPYPSLSFDMLHCA 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~----~A~ergl~~~~~~~da~~----LPfpd~sFDlV~~~ 354 (697)
++.+|||||||+|.++..+++... ...|+++|+|+.|++ .|+++ .++.+...|+.. .+++ ++||+|+|.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 457999999999999999988742 357999999998654 34433 355666667665 3555 799999997
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.. . ..+...++.++.|+|||||+|+++.+
T Consensus 134 ~~-~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 134 IA-Q--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CC-S--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc-C--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 32 2 22334569999999999999999853
No 95
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.25 E-value=6.6e-11 Score=117.20 Aligned_cols=96 Identities=15% Similarity=0.038 Sum_probs=78.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||||||+|.++..+++. ...|+++|+++.+++.|+++ +++ +.+..+|+........+||+|++...
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 131 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG- 131 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-
T ss_pred CCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-
Confidence 479999999999999999988 35699999999999988764 444 67777887763333357999998864
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
. +.. ++.++.++|||||+++++....
T Consensus 132 ~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 132 G----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp C----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred c----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 2 455 9999999999999999998753
No 96
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.24 E-value=2.1e-11 Score=121.44 Aligned_cols=102 Identities=13% Similarity=0.190 Sum_probs=82.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LP--fpd~sFDlV~~~~~ 356 (697)
..+|||||||+|.++..|++.. +...++|+|+|+.+++.|+++ ++ ++.+..+|+..++ +++++||.|++.+.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 4689999999999999998873 346799999999999988764 44 5678888888776 78889999998765
Q ss_pred ccccccc--------HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQK--------DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d--------~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
..|... ...++.++.++|||||.|++.+..
T Consensus 118 -~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 118 -DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred -CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 333321 257899999999999999998753
No 97
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.24 E-value=1.8e-11 Score=117.54 Aligned_cols=93 Identities=10% Similarity=0.022 Sum_probs=76.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 363 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~d 363 (697)
..+|||+|||+|.++..+++.+ .++++|+|+.|++. ..++.+.++|+.. ++++++||+|+|+.. +++.++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~-~~~~~~ 93 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPP-YVPDTD 93 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCC-CBTTCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCC-CccCCc
Confidence 4699999999999999999885 79999999999987 3456677778776 677789999999877 554332
Q ss_pred ---------HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 364 ---------DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 364 ---------~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
...++.++.+.| |||.+++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 246899999999 99999998753
No 98
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.24 E-value=1.1e-11 Score=124.46 Aligned_cols=102 Identities=19% Similarity=0.198 Sum_probs=81.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCC-C--CCCCCccEEEecc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQL-P--YPSLSFDMLHCAR 355 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~L-P--fpd~sFDlV~~~~ 355 (697)
..+|||||||+|.++..+++.. ....|+|+|+|+.+++.|+++ ++ ++.+.++|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 4789999999999999999874 346799999999999887654 44 577888887774 4 7889999999986
Q ss_pred ccccccccH--------HHHHHHHHHhccCCeEEEEEeCC
Q 005417 356 CGVDWDQKD--------GILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 356 ~llh~~~d~--------~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
. ..|.... ..++.++.|+|||||+|++++..
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 5 4443222 25999999999999999998764
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.24 E-value=7.4e-11 Score=112.48 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=77.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCC-CCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPS-LSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd-~sFDlV~~~~~ 356 (697)
..+|||+|||+|.++..+++.+ ..++++|.++.+++.++++ ++ .+.+...+... ++++ ++||+|++..+
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGS 109 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCC
T ss_pred CCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCc
Confidence 4799999999999999999885 5799999999999988763 33 45666666555 3333 58999999876
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++ +...++.++.++|+|||.+++..+.
T Consensus 110 -~~---~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 110 -GG---ELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp -TT---CHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred -hH---HHHHHHHHHHHhcCCCcEEEEEecC
Confidence 32 3578999999999999999998874
No 100
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.23 E-value=3.7e-11 Score=124.83 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=81.5
Q ss_pred CCEEEEeCCCC---chHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCC-----------CCCC
Q 005417 284 VRTILDIGCGY---GSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLP-----------YPSL 346 (697)
Q Consensus 284 ~~~VLDIGCGt---G~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~LP-----------fpd~ 346 (697)
..+|||||||+ |.++..+.+.. +...|+++|+|+.|++.|+++. ..+.+..+|+...+ ++.+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 47999999999 99877766542 3467999999999999998762 35677777775421 3335
Q ss_pred CccEEEecccccccccc--HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 347 SFDMLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 347 sFDlV~~~~~llh~~~d--~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+||+|++..+ +|+.++ ...+|+++.++|||||+|++++...
T Consensus 157 ~~d~v~~~~v-lh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGM-LHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTT-GGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEech-hhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 8999999988 666555 6789999999999999999998765
No 101
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.23 E-value=3.5e-11 Score=121.49 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=80.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCC---CCCccEEEec
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfp---d~sFDlV~~~ 354 (697)
...+|||||||+|.++..++... ....|+++|+++.|++.|++. ++ ++.+.++++..++++ +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 45799999999999999998642 345799999999999888753 54 477888888888764 6799999987
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.+ .+...++.++.++|||||++++...
T Consensus 149 ~~-----~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 149 AV-----ARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp CC-----SCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cc-----CCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 63 5578899999999999999998753
No 102
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.22 E-value=2.5e-11 Score=118.76 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=79.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-cEEEeecccCCCCCCCCccEEEecccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
...+|||||||+|.++..+++.+ ...++++|+++.+++.|+++ ++. +.+...|... +.+++||+|+++..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~- 134 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANIL- 134 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESC-
T ss_pred CCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCc-
Confidence 34799999999999999998874 35799999999999988765 444 6677777654 44689999999876
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.++ ...+++++.++|||||+++++++..
T Consensus 135 ~~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 135 AEI---LLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp HHH---HHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred HHH---HHHHHHHHHHhcCCCCEEEEEecCc
Confidence 332 4678999999999999999987643
No 103
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.21 E-value=2.9e-11 Score=122.88 Aligned_cols=103 Identities=20% Similarity=0.209 Sum_probs=79.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----------CC-CcEEEeecccC-CC--CCCCCc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------GL-PAMIGSFASKQ-LP--YPSLSF 348 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----------gl-~~~~~~~da~~-LP--fpd~sF 348 (697)
...+|||||||+|.++..|++.. ....++|+|+|+.|++.|+++ +. ++.+..+|+.. ++ +++++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34689999999999999999873 446799999999999887642 22 56788888876 67 788999
Q ss_pred cEEEecccccccccc--------HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 349 DMLHCARCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 349 DlV~~~~~llh~~~d--------~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
|.|++.+. ..|... ...+|.++.++|||||.|++.+..
T Consensus 125 D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99998754 333211 136999999999999999998764
No 104
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.21 E-value=3.2e-11 Score=118.90 Aligned_cols=101 Identities=15% Similarity=0.076 Sum_probs=80.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC---CcEEEeecccCCC--CCCCC-ccEEEe
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLP--YPSLS-FDMLHC 353 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl---~~~~~~~da~~LP--fpd~s-FDlV~~ 353 (697)
..+|||+|||+|.++..++.++. ..|+++|+|+.|++.|+++ ++ ++.+..+|+..+. +++++ ||+|++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 37899999999999998777753 4799999999999988764 43 5677777876643 24678 999999
Q ss_pred ccccccccccHHHHHHHH--HHhccCCeEEEEEeCCC
Q 005417 354 ARCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 354 ~~~llh~~~d~~~~L~El--~RvLKPGG~Lvis~p~~ 388 (697)
... ++ ..+...++.++ .++|||||.++++....
T Consensus 132 ~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 876 44 34566788888 77899999999987643
No 105
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.21 E-value=7.5e-11 Score=117.29 Aligned_cols=102 Identities=17% Similarity=0.067 Sum_probs=80.1
Q ss_pred CCCEEEEeCCC-CchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCC-CCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCG-tG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~L-Pfpd~sFDlV~~~~~ 356 (697)
+..+|||+||| +|.++..+++.. ...++++|+++.+++.|+++ ++++.+.++|+..+ ++++++||+|+|+..
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 45899999999 999999999873 45799999999999888754 55677887776433 466789999999865
Q ss_pred ccccccc-------------------HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQK-------------------DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d-------------------~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+++..+ ...++.++.++|||||++++..+.
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 133 -YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp -CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred -CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 332211 367899999999999999998664
No 106
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.21 E-value=5.7e-11 Score=116.51 Aligned_cols=94 Identities=18% Similarity=0.059 Sum_probs=78.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.+ .+++++|+++.+++.|+++ ++ ++.+..+|....+.++++||+|++..+ .
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~ 153 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA-P 153 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB-C
T ss_pred CCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc-h
Confidence 4899999999999999999883 5799999999999988765 33 467778888777777789999999987 4
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++..+ ++.++|||||++++..+.
T Consensus 154 ~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSCCT------HHHHTEEEEEEEEEEECS
T ss_pred hhhhH------HHHHhcccCcEEEEEEcC
Confidence 44443 689999999999999875
No 107
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.20 E-value=5.2e-11 Score=121.62 Aligned_cols=103 Identities=15% Similarity=0.040 Sum_probs=80.1
Q ss_pred ccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecc---cCCCCCCCCccEEEec
Q 005417 281 LAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFAS---KQLPYPSLSFDMLHCA 354 (697)
Q Consensus 281 ~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da---~~LPfpd~sFDlV~~~ 354 (697)
..++.+|||+|||+|.++..+++.-.....|+++|+++.|++.++++. .++.....+. ...++..+++|+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 345689999999999999999987335567999999999999887652 2344444443 3456777899999875
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
. .+..+...++.++.++|||||+++++..
T Consensus 155 ~---~~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 155 V---AQPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp C---CCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c---cCChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 3 3345667899999999999999999864
No 108
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.20 E-value=2.2e-11 Score=133.52 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=90.9
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----------C-
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------G- 328 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-----------g- 328 (697)
...+..+.+.+...++ .+|||||||+|.++..++... ....++|+|+++.+++.|++. |
T Consensus 159 ~~~i~~il~~l~l~~g--------d~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDD--------DLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4455556666555444 899999999999999988652 233599999999998887641 3
Q ss_pred --CCcEEEeecccCCCCCC--CCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 329 --LPAMIGSFASKQLPYPS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 329 --l~~~~~~~da~~LPfpd--~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.++.+.++|+..+|+++ ..||+|+++.. + +.++....|.++.|+|||||.|+++++...
T Consensus 230 ~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWRERIANTSVIFVNNF-A-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-T-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CCCCeEEEECcccCCccccccCCccEEEEccc-c-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 35778889998888754 47999999865 3 346777899999999999999999876543
No 109
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=2.3e-11 Score=120.18 Aligned_cols=101 Identities=19% Similarity=0.182 Sum_probs=79.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHH----HH----cCC-CcEEEeecccCCCCCCCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT----LE----RGL-PAMIGSFASKQLPYPSLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A----~e----rgl-~~~~~~~da~~LPfpd~sFDlV~~~ 354 (697)
..+|||||||+|.++..|++.. +...++++|+|+.|++.+ ++ .+. ++.+.++|+..+|+++++ |.|+..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 4789999999999999999873 346899999999988753 21 233 567888999999998877 887744
Q ss_pred ccc--c--cccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 355 RCG--V--DWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 355 ~~l--l--h~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
... . ++.+++..+|+++.|+|||||.++++..
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 321 1 2445667899999999999999999753
No 110
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=5.5e-11 Score=127.60 Aligned_cols=99 Identities=18% Similarity=0.219 Sum_probs=81.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..+++.+ ...|+++|+| +|++.|+++ ++. +.+..+++..+++++++||+|+|..+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred CCCEEEEEeccchHHHHHHHHCC--CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 34799999999999999999885 3479999999 488877653 444 77888999999999999999999653
Q ss_pred c--ccccccHHHHHHHHHHhccCCeEEEEE
Q 005417 357 G--VDWDQKDGILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 357 l--lh~~~d~~~~L~El~RvLKPGG~Lvis 384 (697)
. +++..+...++.++.|+|||||++++.
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 2 334466788999999999999999743
No 111
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.18 E-value=5.2e-11 Score=127.45 Aligned_cols=96 Identities=15% Similarity=0.220 Sum_probs=79.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----C--CCcEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----g--l~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||||||+|.++..+++.+ ...|+++|.++ |++.|+++ + ..+.+..+++..+++++++||+|++..+.
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred CCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 4799999999999999999885 34799999996 88887654 3 35678888999999998899999997631
Q ss_pred --ccccccHHHHHHHHHHhccCCeEEE
Q 005417 358 --VDWDQKDGILLLEVDRVLKPGGYFV 382 (697)
Q Consensus 358 --lh~~~d~~~~L~El~RvLKPGG~Lv 382 (697)
+.+..+...++.++.++|||||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3334556789999999999999998
No 112
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.18 E-value=8.3e-11 Score=123.79 Aligned_cols=130 Identities=12% Similarity=0.133 Sum_probs=87.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE-EeecccCCC---CCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-GSFASKQLP---YPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~-~~~da~~LP---fpd~sFDlV~~~~~ll 358 (697)
...+|||||||||.++..|++++ ...|+++|+|+.|++.+.++...+.. ...++..++ ++..+||+|+|..+ +
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s-f 161 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS-F 161 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS-S
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEee-H
Confidence 34799999999999999999885 34799999999999887654433322 222333333 34456999999876 3
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCCCChh--------hhhhhHH-hhhhhhhhhhhhhccceEEe
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQ--------AFLRNKE-NQKRWNFVRDFVENLCWELV 418 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~--------~~lr~~e-~~~~W~~l~~la~~~~w~ll 418 (697)
+. ...+|.++.|+|||||.|++...+.... +..++.. +...-+.+..++...+|...
T Consensus 162 ~s---l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 162 IS---LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp SC---GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred hh---HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 32 3679999999999999999974221110 0111111 22344556667777888764
No 113
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.18 E-value=8.2e-11 Score=117.07 Aligned_cols=94 Identities=13% Similarity=0.014 Sum_probs=76.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecccCCCCCCCCccEEEeccccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVDW 360 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da~~LPfpd~sFDlV~~~~~llh~ 360 (697)
..+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. ++.+..++......++++||+|++..+ +++
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-~~~ 146 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWAT-APT 146 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSB-BSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCc-HHH
Confidence 4799999999999999999885 579999999999999987632 567777777663334679999999988 444
Q ss_pred cccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 361 DQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 361 ~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
.. .++.++|||||++++..+.
T Consensus 147 ~~------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 147 LL------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp CC------HHHHHTEEEEEEEEEEECS
T ss_pred HH------HHHHHHcCCCcEEEEEEcC
Confidence 32 3689999999999999764
No 114
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.16 E-value=1.5e-10 Score=116.72 Aligned_cols=98 Identities=15% Similarity=0.092 Sum_probs=81.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----C-CCcEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G-LPAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-----g-l~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||+|||+|.++..+++.-.....++++|.++.+++.|+++ + ..+.+...|....++++++||+|++.
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~--- 173 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD--- 173 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE---
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC---
Confidence 47999999999999999988711235799999999999988765 4 34667788888888888899999984
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
.+++..++.++.++|||||++++..+.
T Consensus 174 ---~~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 174 ---LMEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp ---SSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred ---CcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 245568999999999999999999875
No 115
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.16 E-value=1.5e-10 Score=120.92 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=77.0
Q ss_pred CCEEEEeCCCCch----HHHHHhhc-CC-c-eeEEEEecCCHHHHHHHHHcC----------------------------
Q 005417 284 VRTILDIGCGYGS----FGAHLFSK-EL-L-TMCIANYEASGSQVQLTLERG---------------------------- 328 (697)
Q Consensus 284 ~~~VLDIGCGtG~----~a~~La~~-g~-~-~~sV~gvD~S~~ml~~A~erg---------------------------- 328 (697)
..+|||+|||||. ++..|++. +. . ...|+|+|+|+.|++.|++..
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3689999999998 55556554 21 1 257999999999999998641
Q ss_pred --------CCcEEEeecccCCCCC-CCCccEEEeccccccccccH--HHHHHHHHHhccCCeEEEEE
Q 005417 329 --------LPAMIGSFASKQLPYP-SLSFDMLHCARCGVDWDQKD--GILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 329 --------l~~~~~~~da~~LPfp-d~sFDlV~~~~~llh~~~d~--~~~L~El~RvLKPGG~Lvis 384 (697)
-.+.|.+.|....|++ .+.||+|+|.++++++ ++. .+++.+++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 0355677777776665 5789999999985554 444 67999999999999999984
No 116
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.16 E-value=3.7e-11 Score=112.50 Aligned_cols=100 Identities=13% Similarity=0.052 Sum_probs=78.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC--------CCCCCccEEEec
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------YPSLSFDMLHCA 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LP--------fpd~sFDlV~~~ 354 (697)
...+|||+|||+|.++..+++.......++++|.++ +++. .++.+...+...++ +++++||+|++.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 347999999999999999988711235799999998 6543 35667777887776 777899999998
Q ss_pred cccccccccH-----------HHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 355 RCGVDWDQKD-----------GILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 355 ~~llh~~~d~-----------~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.+ +++..+. ..++.++.++|||||.+++.++...
T Consensus 96 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 96 MA-PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp CC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred CC-ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 76 5554444 5899999999999999999887543
No 117
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.15 E-value=1.4e-10 Score=114.48 Aligned_cols=100 Identities=12% Similarity=0.025 Sum_probs=79.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccC-CCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~-LPfpd~sFDlV~~~~~l 357 (697)
..+|||+|||+|.++..++.++. ..|+++|+++.|++.|+++ ++ ++.+.+.|+.. ++..+++||+|++...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 37899999999999998877753 3799999999999988754 33 56778788766 5667789999999866
Q ss_pred ccccccHHHHHHHHHH--hccCCeEEEEEeCC
Q 005417 358 VDWDQKDGILLLEVDR--VLKPGGYFVWTSPL 387 (697)
Q Consensus 358 lh~~~d~~~~L~El~R--vLKPGG~Lvis~p~ 387 (697)
++ ......++.++.+ +|+|||+++++...
T Consensus 132 ~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 FR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 44 3456678888865 59999999998763
No 118
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.15 E-value=1.4e-10 Score=125.95 Aligned_cols=100 Identities=17% Similarity=0.188 Sum_probs=78.4
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC----CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL----PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl----~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
.+|||+|||+|.++..+++.+ +...|+++|+++.+++.|+++ ++ .+.+...|... ++++++||+|+|+..
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 799999999999999999874 346799999999999888754 32 35567777665 567789999999977
Q ss_pred ccccc----cc-HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWD----QK-DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~----~d-~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+|.. .. ...++.++.++|||||.++++...
T Consensus 302 -fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 302 -FHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp -C-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred -cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 4432 12 236899999999999999998653
No 119
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.15 E-value=5.2e-11 Score=127.24 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=79.8
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 360 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~ 360 (697)
.+|||||||+|.++..+++.+ ....++++|+|+.+++.|+++ ++...+...|... +.+++||+|+|+.. +|+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~--~~~~~fD~Iv~~~~-~~~ 273 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS--EVKGRFDMIISNPP-FHD 273 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TCCSCEEEEEECCC-CCS
T ss_pred CeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc--cccCCeeEEEECCC-ccc
Confidence 689999999999999999875 335799999999999888764 5566666666544 34679999999987 553
Q ss_pred -----cccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 361 -----DQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 361 -----~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
..+...+++++.++|||||.+++....
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 234468999999999999999998764
No 120
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.15 E-value=1.3e-10 Score=124.96 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=83.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC--CCCCCCccEEEec
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL--PYPSLSFDMLHCA 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L--Pfpd~sFDlV~~~ 354 (697)
+..+|||||||+|.++..++++. +...++++|. +.+++.|+++ ++ .+.+..+|.... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 45799999999999999999863 4467999999 9999988865 32 467777887765 576 789999999
Q ss_pred ccccccccc-HHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 355 RCGVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 355 ~~llh~~~d-~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.++++|.++ ...+|++++++|||||++++.++...
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 985555533 25789999999999999999886543
No 121
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.15 E-value=1.7e-10 Score=112.71 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=78.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ ++.+...+...++ ++++||+|++...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 4799999999999999998763 345799999999999888754 44 3667777877766 4578999998643
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.+...++.++.++|+|||++++...
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4567899999999999999999864
No 122
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.15 E-value=1.3e-10 Score=118.98 Aligned_cols=98 Identities=19% Similarity=0.104 Sum_probs=80.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCC---CCCccEEEec
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfp---d~sFDlV~~~ 354 (697)
...+|||||||+|..+..++... ....|+++|+++.+++.|++. ++ ++.+..++++.++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45799999999999999998763 346799999999999888754 55 477888888887753 4799999997
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.+ .+...++.++.++|||||+|++...
T Consensus 159 a~-----~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 159 AV-----APLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp SS-----CCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred Cc-----CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 54 3457899999999999999998654
No 123
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.14 E-value=4.7e-11 Score=112.41 Aligned_cols=99 Identities=23% Similarity=0.237 Sum_probs=77.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccC-CC-C--CCCCccEEEecc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQ-LP-Y--PSLSFDMLHCAR 355 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~-LP-f--pd~sFDlV~~~~ 355 (697)
..+|||+|||+|.++..+++.+.. ++++|+++.+++.|+++ ++++.+.+.|+.. ++ + .+++||+|++..
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 478999999999999999988633 99999999999888764 4467777777655 22 1 134899999987
Q ss_pred ccccccccHHHHHHHHH--HhccCCeEEEEEeCCC
Q 005417 356 CGVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLT 388 (697)
Q Consensus 356 ~llh~~~d~~~~L~El~--RvLKPGG~Lvis~p~~ 388 (697)
. ++ .+...++..+. ++|||||.++++.+..
T Consensus 119 ~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 P-YA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp C-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred C-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 6 43 34456777777 9999999999988754
No 124
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.14 E-value=8.7e-11 Score=112.37 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=85.5
Q ss_pred hhhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEE
Q 005417 260 VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMI 333 (697)
Q Consensus 260 ~~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~ 333 (697)
.....+.+.+.+... ....+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++ ++ ++.+
T Consensus 28 ~~~~~~~~~~~l~~~-------~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 98 (187)
T 2fhp_A 28 TDKVKESIFNMIGPY-------FDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKEPEKFEV 98 (187)
T ss_dssp CHHHHHHHHHHHCSC-------CSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEE
T ss_pred HHHHHHHHHHHHHhh-------cCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCCCcceEE
Confidence 344455555555311 134799999999999999888864 35799999999999888754 33 3667
Q ss_pred EeecccCC----CCCCCCccEEEeccccccccccHHHHHHHH--HHhccCCeEEEEEeCCC
Q 005417 334 GSFASKQL----PYPSLSFDMLHCARCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 334 ~~~da~~L----Pfpd~sFDlV~~~~~llh~~~d~~~~L~El--~RvLKPGG~Lvis~p~~ 388 (697)
..+|+... ++++++||+|++... ++ ..+....+..+ .++|||||++++..+..
T Consensus 99 ~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 99 RKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 77776552 233679999999876 44 23456677777 89999999999987754
No 125
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.13 E-value=1.8e-10 Score=121.22 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=84.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..+++.. +...++++|++ .+++.|+++ ++ .+.+...|....+++++ ||+|++.++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 34799999999999999998873 34579999999 999888765 33 36778888877777764 999999998
Q ss_pred ccccc-ccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 357 GVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 357 llh~~-~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
++++. ++...+|+++.++|||||++++.++...
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 55553 2236899999999999999999987654
No 126
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.13 E-value=2.5e-11 Score=118.15 Aligned_cols=101 Identities=8% Similarity=-0.017 Sum_probs=64.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CCcEEEeecccCCCCCC-----CCccEEEe
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQLPYPS-----LSFDMLHC 353 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~~~~~~~da~~LPfpd-----~sFDlV~~ 353 (697)
...+|||+|||+|.++..+++.. ....++++|+++.+++.|+++. .++.+.++|+.. ++++ ++||+|+|
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEE
Confidence 34799999999999999999874 3467999999999999887652 245566666665 5555 89999999
Q ss_pred cccccccccc--------------------------HHHHHHHHHHhccCCeE-EEEEeC
Q 005417 354 ARCGVDWDQK--------------------------DGILLLEVDRVLKPGGY-FVWTSP 386 (697)
Q Consensus 354 ~~~llh~~~d--------------------------~~~~L~El~RvLKPGG~-Lvis~p 386 (697)
+.. ++...+ ...++.++.++|||||+ +++..+
T Consensus 108 npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 108 NPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp CCC-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred CCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 754 221111 05688999999999999 555443
No 127
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.13 E-value=2.6e-10 Score=116.49 Aligned_cols=102 Identities=17% Similarity=0.132 Sum_probs=79.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC--CCCCCccEEEecc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP--YPSLSFDMLHCAR 355 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LP--fpd~sFDlV~~~~ 355 (697)
..+|||+|||+|.++..+++++. ..++++|+++.+++.|+++ ++ .+.+..+|+..++ +++++||+|+|+.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 47999999999999999998853 3799999999999988764 44 3677888887765 5678999999975
Q ss_pred ccccc----c---------------ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 356 CGVDW----D---------------QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 356 ~llh~----~---------------~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
..+.. . .+...++.++.++|||||++++..+.
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 42221 0 12356999999999999999997653
No 128
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.13 E-value=1.4e-10 Score=119.71 Aligned_cols=98 Identities=11% Similarity=0.134 Sum_probs=80.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----CC-CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----GL-PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||+|||+|.++..+++.......++++|+++.+++.|+++ +. ++.+..+|+.. ++++++||+|++.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~-- 186 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD-- 186 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC--
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc--
Confidence 347999999999999999988611245799999999999988765 43 46677778766 6777899999983
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
.+++..++.++.++|||||+++++++.
T Consensus 187 ----~~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 187 ----IPDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp ----CSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 245668999999999999999999874
No 129
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.13 E-value=2.3e-10 Score=120.96 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=82.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..+++.. +...++++|+ +.+++.|+++ ++ .+.+...|.. .+++. +||+|+|.++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 45799999999999999998863 4467899999 9999888764 33 4677777775 46665 8999999999
Q ss_pred ccccccc-HHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 357 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 357 llh~~~d-~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+++|.++ ..++|++++++|||||++++.++...
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 5555432 36899999999999999999987554
No 130
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.13 E-value=8.3e-11 Score=112.26 Aligned_cols=101 Identities=11% Similarity=0.066 Sum_probs=77.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC-CCCCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-LPfpd~sFDlV~~~~~ 356 (697)
..+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++ ++ .+.+...|+.. ++..+++||+|++...
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 4799999999999999999874 35799999999999988764 33 35667777665 4444567999999865
Q ss_pred cccccccHHHHHHHHH--HhccCCeEEEEEeCCC
Q 005417 357 GVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d~~~~L~El~--RvLKPGG~Lvis~p~~ 388 (697)
++. .....++..+. ++|||||++++.....
T Consensus 110 -~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 110 -YAK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp -SHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred -CCc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 332 23456777776 9999999999988754
No 131
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=1.7e-10 Score=118.37 Aligned_cols=99 Identities=17% Similarity=0.121 Sum_probs=81.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-----C---CCcEEEeecccCCCCCCCCccEEEecc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G---LPAMIGSFASKQLPYPSLSFDMLHCAR 355 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-----g---l~~~~~~~da~~LPfpd~sFDlV~~~~ 355 (697)
..+|||+|||+|.++..+++.......++++|.++.+++.|+++ + .++.+...|+...++++++||+|++..
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM 179 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC
Confidence 37999999999999999988521235799999999999988765 3 356778888888888888999999842
Q ss_pred ccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 356 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 356 ~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++..++.++.++|+|||++++..+..
T Consensus 180 ------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 180 ------LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred ------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 345579999999999999999998853
No 132
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.12 E-value=8.2e-11 Score=118.70 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=71.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCC-HHHHHHH---HHc----CC-CcEEEeecccCCCCC-CCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEAS-GSQVQLT---LER----GL-PAMIGSFASKQLPYP-SLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S-~~ml~~A---~er----gl-~~~~~~~da~~LPfp-d~sFDlV~ 352 (697)
...+|||||||+|.++..|++.. ....|+|+|+| +.|++.| +++ ++ ++.+.++++..+|.. .+.+|.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 34789999999999999998653 45679999999 7777776 432 44 467888888888632 13455554
Q ss_pred ecccc----ccccccHHHHHHHHHHhccCCeEEEEEe
Q 005417 353 CARCG----VDWDQKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 353 ~~~~l----lh~~~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
+++.. .+...+...+|.++.|+|||||+|++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 44320 0111223468999999999999999944
No 133
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.12 E-value=4.6e-11 Score=118.50 Aligned_cols=100 Identities=10% Similarity=0.229 Sum_probs=77.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
...+|||||||+|.++..++.... .++++++|+++.|++.++++ |+...+...+.... .+.++||+|++..+ +
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~-L 125 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKM-L 125 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETC-H
T ss_pred CCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhH-H
Confidence 357999999999999999977643 34899999999999988754 55544444454433 45678999999988 6
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEe
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
|+.++.+.++.++.+.|||||+|+-..
T Consensus 126 HlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 666666677889999999999887654
No 134
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.12 E-value=1.8e-10 Score=121.63 Aligned_cols=110 Identities=17% Similarity=0.085 Sum_probs=84.5
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEee
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSF 336 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~ 336 (697)
.....+.+.+...+ +.+|||||||+|.++..+++.+.....|+++|+++.+++.|+++ ++ ++.+...
T Consensus 62 ~~~~~l~~~l~~~~--------~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~ 133 (317)
T 1dl5_A 62 SLMALFMEWVGLDK--------GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (317)
T ss_dssp HHHHHHHHHTTCCT--------TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCC--------cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 33445555554433 37999999999999999998753335699999999999988765 44 3677778
Q ss_pred cccCCCCCCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 337 ASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 337 da~~LPfpd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
|....+.++++||+|++..+ +++.. .++.++|||||.++++..
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~-~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVG-VDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSB-BSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred ChhhccccCCCeEEEEEcCC-HHHHH------HHHHHhcCCCcEEEEEEC
Confidence 88776656679999999988 44443 578899999999999865
No 135
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.11 E-value=2.8e-10 Score=118.22 Aligned_cols=122 Identities=7% Similarity=0.115 Sum_probs=91.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
+.+|||+|||+|.++..+++.+.. .|+++|+++.+++.|+++ ++. +.+.++|+..++. +++||+|++...
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-
Confidence 479999999999999999988643 699999999999988754 443 5678888888876 679999998643
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEee
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 419 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~ 419 (697)
.....++.++.++|||||++++.+..+.... .....+.+...++..+|+...
T Consensus 202 ----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc------cccHHHHHHHHHHHcCCeeEE
Confidence 2335789999999999999999876532100 012234455666677776644
No 136
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.11 E-value=1.9e-10 Score=114.48 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=77.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC-CCC-C----CCCccEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPY-P----SLSFDML 351 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-LPf-p----d~sFDlV 351 (697)
+.+|||||||+|..+..+++.......|+++|+++.+++.|+++ ++ .+.+..+++.. ++. + .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 47999999999999999998522346799999999999988764 44 36677777643 332 2 2689999
Q ss_pred EeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 352 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 352 ~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++... .++..+...++.++ ++|||||++++.+..
T Consensus 139 ~~d~~-~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 139 FLDHW-KDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EECSC-GGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEcCC-cccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 99875 44333444677777 999999999998765
No 137
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.11 E-value=2.4e-10 Score=114.54 Aligned_cols=94 Identities=16% Similarity=0.085 Sum_probs=75.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccC----CCCCCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQ----LPYPSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~----LPfpd~sFDlV~~~~ 355 (697)
+..+|||||||+|.++..+++... ...|+++|+++.+++.|+++. .++.+...++.. ++++ ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe-
Confidence 457999999999999999998732 357999999999998887642 356677778777 7776 789999832
Q ss_pred ccccccccH---HHHHHHHHHhccCCeEEEEE
Q 005417 356 CGVDWDQKD---GILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 356 ~llh~~~d~---~~~L~El~RvLKPGG~Lvis 384 (697)
.+++ ..++.++.++|||||+++++
T Consensus 151 -----~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 -----VAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp -----CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 2333 67899999999999999997
No 138
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.11 E-value=2.4e-10 Score=112.44 Aligned_cols=97 Identities=15% Similarity=0.040 Sum_probs=75.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.+.....++++|+++.+++.|+++ ++ ++.+...+.......+++||+|++..+ +
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-~ 156 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAA-G 156 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSB-B
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCc-h
Confidence 47999999999999999998742235799999999999988765 33 356666666432223678999999988 4
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++.. .++.++|||||.+++..+.
T Consensus 157 ~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 157 PKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SSCC------HHHHHTEEEEEEEEEEESS
T ss_pred HHHH------HHHHHHcCCCcEEEEEECC
Confidence 4443 4889999999999998864
No 139
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.11 E-value=3.6e-11 Score=122.25 Aligned_cols=127 Identities=12% Similarity=0.111 Sum_probs=78.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEE------eecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIG------SFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~------~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..|++++. ..|+++|+|+.|++.|+++...+... ......++ ...||.+.+..+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFE--QGRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCC--SCCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcC--cCCCCEEEEEEE
Confidence 347999999999999999998853 37999999999999987764333221 11111222 112444444433
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCCCChh-hh--h------hhH-HhhhhhhhhhhhhhccceEEe
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQ-AF--L------RNK-ENQKRWNFVRDFVENLCWELV 418 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~-~~--l------r~~-e~~~~W~~l~~la~~~~w~ll 418 (697)
+.+. ..+|.++.|+|||||++++... +... .+ . ++. ......+.+..+++..+|+..
T Consensus 113 ~~~l----~~~l~~i~rvLkpgG~lv~~~~-p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~ 179 (232)
T 3opn_A 113 FISL----DLILPPLYEILEKNGEVAALIK-PQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVK 179 (232)
T ss_dssp SSCG----GGTHHHHHHHSCTTCEEEEEEC-HHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred hhhH----HHHHHHHHHhccCCCEEEEEEC-cccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEE
Confidence 2221 5799999999999999999741 1110 00 0 011 112234556666777788764
No 140
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.10 E-value=1.3e-10 Score=125.88 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=80.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..+++.+. ..|+++|.| .|++.|+++ ++. +.+..+++..++++ ++||+|+|...
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWM 138 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred CCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcCh
Confidence 457999999999999999999863 379999999 899887654 443 67888899999887 79999999654
Q ss_pred ccccc---ccHHHHHHHHHHhccCCeEEEEEe
Q 005417 357 GVDWD---QKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 357 llh~~---~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
.++. .....++.++.++|||||+++++.
T Consensus 139 -~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 139 -GYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp -BTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred -hhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 3322 456789999999999999998654
No 141
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.10 E-value=3e-10 Score=120.72 Aligned_cols=112 Identities=19% Similarity=0.280 Sum_probs=85.4
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEE
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 334 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~ 334 (697)
..|.+.+.+.+.... ..+|||||||+|.++..+++.+ ...|+++|.+ .|++.|+++ ++ .+.+.
T Consensus 24 ~~y~~ai~~~~~~~~--------~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~ 92 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFK--------DKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELNGFSDKITLL 92 (328)
T ss_dssp HHHHHHHHHHHHHHT--------TCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHhhHhhcC--------CCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEE
Confidence 344555554444333 3799999999999999999875 3479999999 588877654 43 36778
Q ss_pred eecccCCCCCCCCccEEEecccc--ccccccHHHHHHHHHHhccCCeEEEE
Q 005417 335 SFASKQLPYPSLSFDMLHCARCG--VDWDQKDGILLLEVDRVLKPGGYFVW 383 (697)
Q Consensus 335 ~~da~~LPfpd~sFDlV~~~~~l--lh~~~d~~~~L~El~RvLKPGG~Lvi 383 (697)
.+++..+++++++||+|+|.... +.+......++.++.++|||||.++.
T Consensus 93 ~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 93 RGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 88998999888899999997542 22345567899999999999999984
No 142
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.10 E-value=3.7e-10 Score=115.14 Aligned_cols=99 Identities=14% Similarity=0.002 Sum_probs=72.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHH----HHHHHcCCCcEEEeecccCCC---CCCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQV----QLTLERGLPAMIGSFASKQLP---YPSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml----~~A~ergl~~~~~~~da~~LP---fpd~sFDlV~~~~ 355 (697)
++.+|||+|||+|.++..+++.......|+++|+++.|+ +.++++ .++.+..+|+.... ...++||+|++..
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecC
Confidence 568999999999999999987633345799999999885 344443 46677777776532 2246899999885
Q ss_pred ccccccccHHH-HHHHHHHhccCCeEEEEEeC
Q 005417 356 CGVDWDQKDGI-LLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 356 ~llh~~~d~~~-~L~El~RvLKPGG~Lvis~p 386 (697)
. . ++... ++..+.++|||||+|+++..
T Consensus 155 a-~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 155 A-Q---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp C-C---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred C-C---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 5 2 34444 45566779999999999864
No 143
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.10 E-value=9.2e-11 Score=119.07 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=79.2
Q ss_pred CCEEEEeCCCCchHHHHHhhc---CCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC---CCCC-CCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSK---ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPS-LSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~---g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L---Pfpd-~sFDlV~~~~~ 356 (697)
+.+|||||||+|..+..|++. ......|+++|+++.|++.|+....++.+.++|+..+ ++.+ .+||+|++...
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 379999999999999999876 1234679999999999988774445677888888774 5444 47999998754
Q ss_pred cccccccHHHHHHHHHH-hccCCeEEEEEeC
Q 005417 357 GVDWDQKDGILLLEVDR-VLKPGGYFVWTSP 386 (697)
Q Consensus 357 llh~~~d~~~~L~El~R-vLKPGG~Lvis~p 386 (697)
| .+...+|.++.| +|||||+|++.+.
T Consensus 162 --~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 --H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp --C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred --h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 2 356789999998 9999999999876
No 144
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.10 E-value=8.9e-12 Score=125.07 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=80.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||+|||+|.++..+++.+ ..|+++|+++.+++.|+++ ++ ++.+.++|+..++ ++++||+|++...
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~- 153 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP- 153 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC-
T ss_pred CCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC-
Confidence 4799999999999999999885 5799999999999988754 44 5778888887776 5679999999987
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEE
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis 384 (697)
+++..+....+.++.++|+|||++++.
T Consensus 154 ~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 666666656888999999999997764
No 145
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.09 E-value=5e-10 Score=120.66 Aligned_cols=101 Identities=23% Similarity=0.229 Sum_probs=82.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..++++. +...++++|+ +.+++.|+++ ++ .+.+...|.. .+++. .||+|++..+
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred cCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 45899999999999999999873 4567899999 9999888764 33 4677777876 56776 8999999999
Q ss_pred cccccccHH--HHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d~~--~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++| ++.. .+|++++++|||||++++.++..
T Consensus 278 lh~~-~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 278 LHDW-DDDDVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp GGGS-CHHHHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred hccC-CHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 5444 4443 79999999999999999988654
No 146
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.09 E-value=4.5e-10 Score=114.37 Aligned_cols=101 Identities=18% Similarity=0.159 Sum_probs=79.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC-CCCC--CCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYP--SLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-LPfp--d~sFDlV~~~ 354 (697)
+.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+..+++.. ++.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 47999999999999999998732246799999999999988765 44 36677777655 3432 3489999986
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.. ..+...++.++.++|||||++++.+...
T Consensus 144 ~~----~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 144 AD----KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SC----GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred Cc----hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 43 3445679999999999999999987643
No 147
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.09 E-value=3.3e-10 Score=114.54 Aligned_cols=98 Identities=20% Similarity=0.240 Sum_probs=79.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||+|||+|.++..+++.-.....++++|.++.+++.|+++ ++. +.+...|+... +++++||+|++..
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~-- 170 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL-- 170 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS--
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECC--
Confidence 47999999999999999998721346799999999999988765 443 67777777644 7788999999842
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++..++.++.++|||||++++..+..
T Consensus 171 ----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 171 ----PQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp ----SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred ----CCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 455679999999999999999988753
No 148
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.09 E-value=5.9e-11 Score=113.57 Aligned_cols=87 Identities=20% Similarity=0.174 Sum_probs=74.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-CcEEEeecccCCCC---CCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPY---PSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-~~~~~~~da~~LPf---pd~sFDlV~~~~~ll 358 (697)
++.+|||||||. +.+|+|+.|++.|+++.. .+.+.++++..+++ ++++||+|+|..+ +
T Consensus 12 ~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~-l 73 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV-P 73 (176)
T ss_dssp TTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCS-T
T ss_pred CCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECCh-h
Confidence 458999999996 128999999999988742 47788889988887 8899999999988 6
Q ss_pred ccc-ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DWD-QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~~-~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
|+. ++...+|++++|+|||||+|++..+.
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 666 78889999999999999999997653
No 149
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.09 E-value=4.1e-11 Score=130.98 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=80.2
Q ss_pred CCCEEEEeCCC------CchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC------CCCccE
Q 005417 283 GVRTILDIGCG------YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP------SLSFDM 350 (697)
Q Consensus 283 ~~~~VLDIGCG------tG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfp------d~sFDl 350 (697)
...+||||||| +|..+..+++..++...|+++|+|+.|. ....++.+.++|+..+|+. +++||+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 45799999999 7777777776533456899999999983 2345678889999998887 789999
Q ss_pred EEeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 351 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 351 V~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
|+|..+ |+..+...+|++++|+|||||+|++.+..
T Consensus 292 Visdgs--H~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 292 VIDDGS--HINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EEECSC--CCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EEECCc--ccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999754 44566788999999999999999999865
No 150
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.08 E-value=2.4e-10 Score=114.53 Aligned_cols=100 Identities=16% Similarity=0.116 Sum_probs=75.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHH----HHHHcCCCcEEEeecccC---CCCCCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ---LPYPSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~----~A~ergl~~~~~~~da~~---LPfpd~sFDlV~~~~ 355 (697)
...+|||+|||+|.++..+++.......++++|+++.|++ .|+++ .++.+..+|+.. +++.+++||+|++..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 4579999999999999999987212357999999987654 44443 467777778766 456678999999964
Q ss_pred ccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 356 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 356 ~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
. .......++.++.++|||||+++++..
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 4 122224568899999999999999754
No 151
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.08 E-value=3.9e-10 Score=113.45 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=79.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-CCCCCccEEEecc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YPSLSFDMLHCAR 355 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-P-fpd~sFDlV~~~~ 355 (697)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ ++.+..+++... + ..+++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 4799999999999999999842 356899999999999988764 43 467777777553 3 3368999999764
Q ss_pred ccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 356 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 356 ~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
. ..+...++.++.++|||||+|++.+..
T Consensus 151 ~----~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 151 A----KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp T----SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred c----HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 3 345668999999999999999996653
No 152
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.07 E-value=3.6e-10 Score=114.58 Aligned_cols=103 Identities=22% Similarity=0.224 Sum_probs=79.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc------------CC-CcEEEeecccC-CC--CCCC
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------------GL-PAMIGSFASKQ-LP--YPSL 346 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er------------gl-~~~~~~~da~~-LP--fpd~ 346 (697)
...+|||||||+|.++..+++.+ ....++++|+|+.+++.|+++ ++ ++.+..+|+.. ++ ++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 34789999999999999999875 345799999999999887653 43 56777888776 66 7788
Q ss_pred CccEEEeccccccccccH--------HHHHHHHHHhccCCeEEEEEeCC
Q 005417 347 SFDMLHCARCGVDWDQKD--------GILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 347 sFDlV~~~~~llh~~~d~--------~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+||.|+.... -.|.... ..++.++.++|||||+|++.+..
T Consensus 128 ~~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 128 QLSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp CEEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999986543 2221100 47999999999999999997653
No 153
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.07 E-value=5.4e-10 Score=110.94 Aligned_cols=98 Identities=15% Similarity=0.096 Sum_probs=77.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----C------CCcEEEeecccCCCCCCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLPYPSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----g------l~~~~~~~da~~LPfpd~sFDlV~ 352 (697)
+..+|||||||+|.++..+++.......++++|+++.+++.++++ + .++.+...|....+.++++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 347999999999999999987622235799999999999888754 2 256677778776666677899999
Q ss_pred eccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 353 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 353 ~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+.....+ ++.++.++|||||+++++...
T Consensus 157 ~~~~~~~-------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 157 VGAAAPV-------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp ECSBBSS-------CCHHHHHTEEEEEEEEEEESC
T ss_pred ECCchHH-------HHHHHHHhcCCCcEEEEEEec
Confidence 9877322 346889999999999998764
No 154
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.07 E-value=2.7e-10 Score=122.14 Aligned_cols=113 Identities=20% Similarity=0.178 Sum_probs=85.6
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEE
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIG 334 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~ 334 (697)
..|.+.+.+.+... +..+|||||||+|.++..+++.+ ...|+++|.|+ |++.|+++ ++ .+.+.
T Consensus 36 ~~y~~~i~~~l~~~--------~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~ 104 (348)
T 2y1w_A 36 GTYQRAILQNHTDF--------KDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVI 104 (348)
T ss_dssp HHHHHHHHHTGGGT--------TTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHhccccC--------CcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEE
Confidence 34445555444433 34799999999999999999875 34799999996 88777653 43 46778
Q ss_pred eecccCCCCCCCCccEEEecccccccc-ccHHHHHHHHHHhccCCeEEEEEe
Q 005417 335 SFASKQLPYPSLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 335 ~~da~~LPfpd~sFDlV~~~~~llh~~-~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
..+...++++ ++||+|++.....|+. +.....+.++.++|||||.++++.
T Consensus 105 ~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 105 PGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 8888888776 5899999997756654 344678889999999999999654
No 155
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.07 E-value=4.4e-10 Score=120.27 Aligned_cols=99 Identities=22% Similarity=0.327 Sum_probs=79.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+...|... +++. .||+|++..+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 35799999999999999999874 3467899999 9999988764 33 46777777654 4554 4999999998
Q ss_pred cccccccH--HHHHHHHHHhccCCeEEEEEeC
Q 005417 357 GVDWDQKD--GILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 357 llh~~~d~--~~~L~El~RvLKPGG~Lvis~p 386 (697)
++++ ++. ..+|+++.++|||||++++.++
T Consensus 258 l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 258 LLNW-SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGGS-CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCC-CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 5554 444 4799999999999999999887
No 156
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.06 E-value=6.2e-10 Score=119.01 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=82.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..++++. +...++++|+ +.+++.|+++ ++ .+.+...|....|+++. |+|++..+
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~v 265 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRI 265 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESC
T ss_pred CCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEech
Confidence 34799999999999999999873 3467999999 9999888764 43 36788888888877753 99999999
Q ss_pred ccccccc-HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d-~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++|.++ ...+|+++.++|||||++++.++..
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 5555432 5689999999999999999988543
No 157
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.05 E-value=2.3e-10 Score=117.11 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=76.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
..+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++.+.+...+.... +++++||+|+++.. .+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~-~~ 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLY-AE 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECC-HH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCc-HH
Confidence 47999999999999999998863 799999999999888764 44456666665442 45678999999754 32
Q ss_pred ccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 360 WDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 360 ~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
....++.++.++|||||++++++..
T Consensus 196 ---~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 196 ---LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ---HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 2467999999999999999998764
No 158
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.05 E-value=4e-10 Score=109.49 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=73.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-eeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCC--------------------
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP-------------------- 342 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~-~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LP-------------------- 342 (697)
..+|||||||+|.++..++++... ...++++|+++.+ ....+.+.++|...++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~ 96 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDY 96 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchhhhhhccccccccccchhhHH
Confidence 478999999999999999987321 4679999999831 1124667777877776
Q ss_pred -----CCCCCccEEEecccccccc----ccH-------HHHHHHHHHhccCCeEEEEEeCC
Q 005417 343 -----YPSLSFDMLHCARCGVDWD----QKD-------GILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 343 -----fpd~sFDlV~~~~~llh~~----~d~-------~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+++++||+|+|..+ .++. .+. ..++.++.++|||||.|++..+.
T Consensus 97 ~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 97 KLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 56789999999876 4442 122 13789999999999999997754
No 159
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.05 E-value=2.2e-10 Score=119.56 Aligned_cols=106 Identities=14% Similarity=0.099 Sum_probs=78.7
Q ss_pred CCCEEEEeCCCC--chHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-----CcEEEeecccCCC----CC--CCCcc
Q 005417 283 GVRTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-----PAMIGSFASKQLP----YP--SLSFD 349 (697)
Q Consensus 283 ~~~~VLDIGCGt--G~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-----~~~~~~~da~~LP----fp--d~sFD 349 (697)
+.++|||||||+ +.++..++++-.+...|+++|+|+.|++.|+++-. .+.+.++|...++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 457999999997 44445554442345689999999999999887521 3667888877652 11 35566
Q ss_pred -----EEEecccccccccc---HHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 350 -----MLHCARCGVDWDQK---DGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 350 -----lV~~~~~llh~~~d---~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.|+++.+ +||.++ +..+++++.++|+|||+|++++....
T Consensus 158 ~~~p~av~~~av-LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 158 LTRPVALTVIAI-VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TTSCCEEEEESC-GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCcchHHhhhh-HhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 5777766 888766 46799999999999999999987654
No 160
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.05 E-value=3.9e-10 Score=113.44 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=77.0
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccCC-C-CCCCCccEEEecc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQL-P-YPSLSFDMLHCAR 355 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~L-P-fpd~sFDlV~~~~ 355 (697)
.+|||||||+|..+..|++.-.....++++|.++.+++.|++. ++. +.+..+++... + +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4899999999999999988532346799999999999888754 444 66677665543 2 4468999999864
Q ss_pred ccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 356 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 356 ~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
. ..+...++.++.++|||||++++.+..
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3 244567999999999999999996553
No 161
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.05 E-value=6.4e-10 Score=114.25 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=79.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCC---------cEEEeecccCC-------CCCCCC
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLP---------AMIGSFASKQL-------PYPSLS 347 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~---------~~~~~~da~~L-------Pfpd~s 347 (697)
..+|||+|||+|.++..++++. ....++++|+++.+++.|+++... +.+...|...+ ++++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 4799999999999999999874 346899999999999999875322 56777887776 366789
Q ss_pred ccEEEecccccc----------------c-cccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 348 FDMLHCARCGVD----------------W-DQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 348 FDlV~~~~~llh----------------~-~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
||+|+|+..... . ......++.++.++|||||+|++..+
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 999999843111 1 12356789999999999999999765
No 162
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.04 E-value=5.9e-10 Score=110.74 Aligned_cols=97 Identities=18% Similarity=0.094 Sum_probs=77.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCC----ceeEEEEecCCHHHHHHHHHc----C------CCcEEEeecccCCC----CCC
Q 005417 284 VRTILDIGCGYGSFGAHLFSKEL----LTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLP----YPS 345 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~----~~~sV~gvD~S~~ml~~A~er----g------l~~~~~~~da~~LP----fpd 345 (697)
..+|||||||+|.++..+++... ....++++|+++.+++.|+++ + .++.+..+|..... .+.
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 47999999999999999988743 335799999999999988765 3 25677778877765 556
Q ss_pred CCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 346 LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 346 ~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++||+|++... .++ ++.++.++|||||++++..+.
T Consensus 161 ~~fD~I~~~~~-~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGAS-ASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSB-BSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCc-hHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 78999999877 332 357889999999999998763
No 163
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.03 E-value=5.3e-10 Score=117.77 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=79.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCCCC--CCCCccEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPY--PSLSFDML 351 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~LPf--pd~sFDlV 351 (697)
.+.+|||||||+|.++..++++. ....++++|+++.+++.|+++. ..+.+..+|+..++. ++++||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 45799999999999999998762 3467999999999999988753 346677777766553 47899999
Q ss_pred EeccccccccccH----HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 352 HCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 352 ~~~~~llh~~~d~----~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++... .++.+.. ..+++++.++|||||++++....+
T Consensus 174 i~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 174 IIDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 99755 3433222 578999999999999999987644
No 164
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.03 E-value=6.6e-10 Score=111.16 Aligned_cols=99 Identities=18% Similarity=0.159 Sum_probs=79.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-CCC--CCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP--SLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-Pfp--d~sFDlV~~~ 354 (697)
..+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ .+.+..+++... +.. +++||+|++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 3799999999999999998873 246799999999999988765 44 366777776653 432 5789999987
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
.. . .+...++.++.++|||||++++.+..
T Consensus 134 ~~-~---~~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 134 AA-K---GQYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp GG-G---SCHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CC-H---HHHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 65 2 35678999999999999999998653
No 165
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.02 E-value=5.6e-10 Score=117.81 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=80.6
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC------CCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------LPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg------l~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
.+|||||||+|.++..+++.. +...++++|+ +.+++.|+++. ..+.+...|... +++ ++||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 799999999999999998873 3457899999 99998887652 246777777766 566 6899999999955
Q ss_pred cccccH--HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 359 DWDQKD--GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 359 h~~~d~--~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+|. +. ..+|+++.++|||||++++.+...
T Consensus 245 ~~~-~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 245 DLD-EAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp GCC-HHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CCC-HHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 554 33 389999999999999999998653
No 166
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.02 E-value=3.7e-10 Score=121.55 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=79.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
+..+|||||||+|.++..++++. ....++++|+ +.+++.|++. ..+.+..+|... ++++ ||+|++..+ +|+.+
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~-lh~~~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAV-CHNWS 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESS-GGGSC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecc-cccCC
Confidence 45799999999999999999875 3457889999 8999877653 346777788766 6765 999999998 45455
Q ss_pred cHH--HHHHHHHHhccCCeEEEEEeCC
Q 005417 363 KDG--ILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 363 d~~--~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+.. .+|++++++|||||++++.++.
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 565 8999999999999999998643
No 167
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.02 E-value=1.6e-09 Score=114.74 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=80.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccc--
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARC-- 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~-- 356 (697)
+.+|||+|||+|..+..+++.......|+++|+++.+++.++++ ++ ++.+.+.|+..++..+++||+|++...
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 47999999999999999997632346799999999999888754 55 567788888877655678999998421
Q ss_pred ---ccccccc----------------HHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 357 ---GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 357 ---llh~~~d----------------~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.++..++ ...+|.++.++|||||++++++....
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 1221111 14789999999999999999886543
No 168
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.02 E-value=1.2e-09 Score=112.43 Aligned_cols=97 Identities=22% Similarity=0.179 Sum_probs=78.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||+|||+|.++..+++.-.....++++|.++.+++.|+++ ++ .+.+...|.... +++++||+|++..
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~-- 189 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV-- 189 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC--
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC--
Confidence 47999999999999999988722346799999999999988765 43 456777777665 6677999999842
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+++..++.++.++|+|||.+++.++.
T Consensus 190 ----~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 190 ----PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp ----SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 45567999999999999999999874
No 169
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.02 E-value=1.2e-09 Score=109.49 Aligned_cols=95 Identities=18% Similarity=0.154 Sum_probs=77.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
..+|||+|||+|.++..+++. ...++++|+++.+++.|+++ ++ .+.+...+.....+++++||+|++..
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-- 166 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS--
T ss_pred CCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC--
Confidence 379999999999999999987 35799999999999988764 43 45667777766543667899999742
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+++..++.++.++|||||.+++..+.
T Consensus 167 ----~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 167 ----REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ----SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 35567999999999999999999885
No 170
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=4.8e-10 Score=111.05 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCC-C-CC----CCCccEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQL-P-YP----SLSFDML 351 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~L-P-fp----d~sFDlV 351 (697)
..+|||||||+|..+..+++.-.....++++|+++.+++.|+++ ++. +.+.++++... + +. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 47999999999999999998632246799999999999888764 443 66777666432 2 11 1789999
Q ss_pred EeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 352 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 352 ~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++... ..+...++.++.++|||||++++.+..
T Consensus 145 ~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 145 YIDAD----KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EECSC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EECCC----HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 96543 345678999999999999999998765
No 171
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.01 E-value=6.1e-10 Score=123.23 Aligned_cols=103 Identities=16% Similarity=0.042 Sum_probs=76.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHH-------HHc----C---CCcEEEeecccCC--CC--C
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT-------LER----G---LPAMIGSFASKQL--PY--P 344 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A-------~er----g---l~~~~~~~da~~L--Pf--p 344 (697)
...+|||||||+|.++..+++.. ....|+|+|+++.+++.| +++ | .++.+..++.... ++ .
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc
Confidence 34899999999999999999862 234699999999998877 443 4 2455555543322 22 2
Q ss_pred CCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 345 SLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 345 d~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.++||+|+++.++ +.++...+|.++.++|||||.+++.++..
T Consensus 321 ~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 321 IPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp GGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred cCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 4689999988663 34667788999999999999999986543
No 172
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.00 E-value=1e-09 Score=108.10 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=77.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccC-CCCCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~-LPfpd~sFDlV~~~~~ 356 (697)
..+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+..+++.. ++..++ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 47999999999999999988632246799999999999988754 33 35666677654 355456 999998743
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
..+...+++++.++|||||++++.+..
T Consensus 136 ----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 136 ----VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp ----TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred ----hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 345678999999999999999997643
No 173
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.00 E-value=5.6e-10 Score=119.18 Aligned_cols=99 Identities=12% Similarity=0.116 Sum_probs=79.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
+..+|||||||+|.++..++++. +...++++|. +.+++.|++. ..+.+..+|... ++++ ||+|++..++++| +
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~-~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNW-T 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGGS-C
T ss_pred cCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhccC-C
Confidence 45799999999999999999873 3457999999 9999887653 246777777755 6653 9999999995555 5
Q ss_pred cHH--HHHHHHHHhccC---CeEEEEEeCCC
Q 005417 363 KDG--ILLLEVDRVLKP---GGYFVWTSPLT 388 (697)
Q Consensus 363 d~~--~~L~El~RvLKP---GG~Lvis~p~~ 388 (697)
+.. .+|++++++||| ||++++.++..
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 555 899999999999 99999998653
No 174
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.00 E-value=9.6e-10 Score=117.21 Aligned_cols=100 Identities=22% Similarity=0.326 Sum_probs=79.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
+..+|||||||+|.++..+++.. ....++++|+ +.+++.|+++ ++ .+.+...|... +++. .||+|++..+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred cCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 34799999999999999999874 3467899999 8899888754 34 46777777654 4554 4999999998
Q ss_pred cccccccH--HHHHHHHHHhccCCeEEEEEeCC
Q 005417 357 GVDWDQKD--GILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 357 llh~~~d~--~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++++ ++. ..+|+++.++|||||++++.++.
T Consensus 259 l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 259 LLNW-PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GGGS-CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccCC-CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 5555 444 47999999999999999999876
No 175
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.00 E-value=1.7e-09 Score=113.83 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=75.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------CCcEEEeecccCC-CCCCCCccEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQL-PYPSLSFDML 351 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------l~~~~~~~da~~L-Pfpd~sFDlV 351 (697)
.+.+|||||||+|.++..++++. ...+|+++|+++.+++.|++.. .++.+..+|+... ...+++||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45899999999999999999872 4567999999999999998641 2456777776543 4456899999
Q ss_pred EeccccccccccH----HHHHHHHHHhccCCeEEEEEeC
Q 005417 352 HCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 352 ~~~~~llh~~~d~----~~~L~El~RvLKPGG~Lvis~p 386 (697)
++... .++.+.. ..+++++.++|||||++++...
T Consensus 162 i~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99644 3333221 5699999999999999999764
No 176
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.00 E-value=1.3e-09 Score=107.99 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-CC---CCCccEEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YP---SLSFDMLH 352 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-P-fp---d~sFDlV~ 352 (697)
+.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+..+++... + ++ .++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 47999999999999999998732246799999999999888754 44 366777776432 1 11 25799999
Q ss_pred eccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 353 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 353 ~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+... ......++.++.++|||||++++.+..
T Consensus 139 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8754 234568999999999999999988764
No 177
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.99 E-value=8.7e-10 Score=110.69 Aligned_cols=108 Identities=16% Similarity=0.123 Sum_probs=80.2
Q ss_pred hHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeec
Q 005417 263 YSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFA 337 (697)
Q Consensus 263 y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~d 337 (697)
....+.+.+...+ ..+|||||||+|.++..+++.+. ..++++|+++.+++.|+++ ++ ++.+...+
T Consensus 79 ~~~~~~~~l~~~~--------~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 148 (235)
T 1jg1_A 79 MVAIMLEIANLKP--------GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGD 148 (235)
T ss_dssp HHHHHHHHHTCCT--------TCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHhcCCCC--------CCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 3445555554433 37899999999999999998742 5799999999999988764 33 45566666
Q ss_pred ccCCCCCCC-CccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 338 SKQLPYPSL-SFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 338 a~~LPfpd~-sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
. ..+++++ .||+|++..+ .++.. .++.++|||||.++++.+..
T Consensus 149 ~-~~~~~~~~~fD~Ii~~~~-~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 149 G-SKGFPPKAPYDVIIVTAG-APKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp G-GGCCGGGCCEEEEEECSB-BSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred c-ccCCCCCCCccEEEECCc-HHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 5 4555554 4999999987 44332 37899999999999998753
No 178
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.99 E-value=7.4e-10 Score=117.69 Aligned_cols=103 Identities=14% Similarity=0.202 Sum_probs=80.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCC-CCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LP-fpd~sFDlV~~~~~ 356 (697)
..+|||||||+|.++..++++. +...++++|. +.+++.++++ ++ .+.+..+|....+ +..+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 5899999999999999999873 3467899999 7788877654 33 3667777877665 13457999999998
Q ss_pred ccccccc-HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 357 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 357 llh~~~d-~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+++|.+. ...+|++++++|||||++++.++..
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 5555432 2689999999999999999988644
No 179
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.98 E-value=8.8e-10 Score=118.88 Aligned_cols=100 Identities=18% Similarity=0.160 Sum_probs=80.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
+..+|||||||+|.++..++++. +...++++|. +.+++.|++. ..+.+..+|... |++++ |+|++..++++|.+
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCH
Confidence 45899999999999999999874 4567899999 8888877653 467788888776 77754 99999999555653
Q ss_pred c-HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 363 K-DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 363 d-~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
. ...+|++++++|||||++++.+...
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 3 2479999999999999999998654
No 180
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.98 E-value=9.5e-10 Score=111.44 Aligned_cols=104 Identities=16% Similarity=0.052 Sum_probs=76.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcC-CceeEEEEecCCHHHHHHHHHc-------CC--C----------------------
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER-------GL--P---------------------- 330 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g-~~~~sV~gvD~S~~ml~~A~er-------gl--~---------------------- 330 (697)
...+|||+|||+|.++..+++.. .....|+++|+++.+++.|+++ ++ .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 34789999999999999998761 1356799999999999988743 11 1
Q ss_pred ---cE-------------EEeecccCCCC-----CCCCccEEEecccccccc--------ccHHHHHHHHHHhccCCeEE
Q 005417 331 ---AM-------------IGSFASKQLPY-----PSLSFDMLHCARCGVDWD--------QKDGILLLEVDRVLKPGGYF 381 (697)
Q Consensus 331 ---~~-------------~~~~da~~LPf-----pd~sFDlV~~~~~llh~~--------~d~~~~L~El~RvLKPGG~L 381 (697)
+. +.+.|...... ..++||+|+|+....+.. .....++.++.++|||||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 33 66677655321 345899999986533322 22357999999999999999
Q ss_pred EEEeC
Q 005417 382 VWTSP 386 (697)
Q Consensus 382 vis~p 386 (697)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99544
No 181
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.98 E-value=1e-09 Score=116.37 Aligned_cols=98 Identities=17% Similarity=0.073 Sum_probs=74.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------------CCcEEEeecccCC--CCCC
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------LPAMIGSFASKQL--PYPS 345 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------------l~~~~~~~da~~L--Pfpd 345 (697)
+.+|||+|||+|.++..+++.......++++|+++.+++.|+++. .++.+..+|+..+ ++++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKS 185 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCC
Confidence 479999999999999999986223367999999999999887641 2566777887776 5677
Q ss_pred CCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 346 LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 346 ~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++||+|++... ++..++.++.++|||||.|++..+.
T Consensus 186 ~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 186 LTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp --EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 88999998643 2334899999999999999998874
No 182
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.98 E-value=1.9e-09 Score=111.17 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=77.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||||||+|.++..+++.. ....++++|+|+.+++.|+++ ++ ++.+.++|... ++++++||+|+++...+
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCB
T ss_pred CCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCC
Confidence 4789999999999999998652 346799999999999988764 44 46677777655 34467899999984311
Q ss_pred c------------cc------------ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 D------------WD------------QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h------------~~------------~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
. +. .....++.++.++|||||++++....
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 1 11 12357899999999999999998653
No 183
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.98 E-value=1.1e-09 Score=117.90 Aligned_cols=100 Identities=19% Similarity=0.156 Sum_probs=81.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
+..+|||||||+|.++..++++. +...++++|. +.+++.|++. ..+.+..+|... |++.+ |+|++..++++|.+
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d 274 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSD 274 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCH
Confidence 45899999999999999999863 4467899999 8888777653 467788888877 78764 99999999556653
Q ss_pred c-HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 363 K-DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 363 d-~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+ ...+|++++++|||||+++|.+...
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 3 3579999999999999999998654
No 184
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.98 E-value=1.7e-09 Score=115.32 Aligned_cols=100 Identities=15% Similarity=0.113 Sum_probs=75.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH--cC--CCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE--RG--LPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~e--rg--l~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
+..+|||||||+|.++..++++. ....++++|.+ .++..++. .+ ..+.+..+|.. .++| +||+|++..+++
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh 258 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILH 258 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGG
T ss_pred CCceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhcc
Confidence 35799999999999999999874 45678999994 44441110 12 23667777774 4455 899999999855
Q ss_pred cccccH--HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 359 DWDQKD--GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 359 h~~~d~--~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+| ++. ..+|++++++|||||+|++.+...
T Consensus 259 ~~-~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 259 NW-GDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp GS-CHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred CC-CHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 54 444 589999999999999999988644
No 185
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.97 E-value=2.6e-09 Score=110.96 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=75.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecC-CHHHHHHHHHcC---------C------CcEEEeecccCCC--C-
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEA-SGSQVQLTLERG---------L------PAMIGSFASKQLP--Y- 343 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~-S~~ml~~A~erg---------l------~~~~~~~da~~LP--f- 343 (697)
...+|||||||+|.++..+++.+. ..|+++|+ ++.+++.|+++. + ++.+...+..... +
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 347999999999999999988752 47999999 899998886542 1 2334333322211 1
Q ss_pred ---CCCCccEEEeccccccccccHHHHHHHHHHhcc---C--CeEEEEEeC
Q 005417 344 ---PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLK---P--GGYFVWTSP 386 (697)
Q Consensus 344 ---pd~sFDlV~~~~~llh~~~d~~~~L~El~RvLK---P--GG~Lvis~p 386 (697)
++++||+|++..+ +++.++...++.++.++|+ | ||.+++...
T Consensus 157 ~~~~~~~fD~Ii~~dv-l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADL-LSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HHHSCSSBSEEEEESC-CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred hhccCCCCCEEEEeCc-ccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 3578999999888 5556777899999999999 9 998777543
No 186
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.97 E-value=1.8e-09 Score=107.33 Aligned_cols=99 Identities=15% Similarity=0.055 Sum_probs=73.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc---CCCcEEEeecccCCC---CCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---GLPAMIGSFASKQLP---YPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er---gl~~~~~~~da~~LP---fpd~sFDlV~~~~~ 356 (697)
+..+|||+|||+|.++..+++.......++++|.++.+++.++++ ..++.+..+|+.... ...++||+|++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 457999999999999999987621224789999999988777543 235667777776521 12358999998644
Q ss_pred cccccccH-HHHHHHHHHhccCCeEEEEEe
Q 005417 357 GVDWDQKD-GILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 357 llh~~~d~-~~~L~El~RvLKPGG~Lvis~ 385 (697)
.++. ..++.++.++|||||++++..
T Consensus 153 ----~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 153 ----QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ----STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2333 345999999999999999983
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.96 E-value=2.1e-09 Score=115.10 Aligned_cols=103 Identities=17% Similarity=0.027 Sum_probs=82.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||+|||+|.++..++..+.....++|+|+++.+++.|+++ ++ .+.+.+.|+..++.+.+.||+|+|+.. +
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP-y 282 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP-H 282 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC-S
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC-C
Confidence 47899999999999999988642335799999999999988754 44 578888999999888788999999754 2
Q ss_pred cc-c-------ccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 359 DW-D-------QKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 359 h~-~-------~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
.. . .....++.++.++|||||.+++.++.
T Consensus 283 g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 283 GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 21 1 11256899999999999999998874
No 188
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.96 E-value=4e-09 Score=112.90 Aligned_cols=103 Identities=16% Similarity=0.105 Sum_probs=78.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCC--CCCCCCccEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQL--PYPSLSFDML 351 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~L--Pfpd~sFDlV 351 (697)
.+.+|||||||+|.++..++++. ...+|+++|+++.+++.|+++. ..+.+..+|+... .+++++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45799999999999999999873 3568999999999999998642 2466777776543 2356799999
Q ss_pred Eecccccccc--cc--HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 352 HCARCGVDWD--QK--DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 352 ~~~~~llh~~--~d--~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++... .++. .. ...+++++.++|||||.|++....
T Consensus 199 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 199 IVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 98643 2221 11 257999999999999999997543
No 189
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.96 E-value=1.6e-09 Score=108.05 Aligned_cols=96 Identities=19% Similarity=0.210 Sum_probs=74.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-----eeEEEEecCCHHHHHHHHHcC----------CCcEEEeecccCCCCCC-CC
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELL-----TMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQLPYPS-LS 347 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~-----~~sV~gvD~S~~ml~~A~erg----------l~~~~~~~da~~LPfpd-~s 347 (697)
..+|||||||+|.++..+++.... ...++++|+++.+++.|+++. .++.+...|... ++++ ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 479999999999999999875211 137999999999999887641 256677777765 5554 78
Q ss_pred ccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 348 FDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 348 FDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
||+|++..+ .++. +.++.++|||||++++....
T Consensus 164 fD~I~~~~~-~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 164 YNAIHVGAA-APDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEECSC-BSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred ccEEEECCc-hHHH------HHHHHHHhcCCCEEEEEEec
Confidence 999999987 4433 36889999999999998764
No 190
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.95 E-value=3.3e-10 Score=118.23 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=72.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------CcEEE--eecccCCCCCCCCccEEEe
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHC 353 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------~~~~~--~~da~~LPfpd~sFDlV~~ 353 (697)
+..+|||||||+|.++..++++ ..|+++|+++ |+..++++.. ++.+. ++|+..+| +++||+|+|
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLC 154 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEE
Confidence 3579999999999999999987 3589999998 6543433322 45677 78888776 679999999
Q ss_pred cccccccccc----HH---HHHHHHHHhccCCe--EEEEEeCCC
Q 005417 354 ARCGVDWDQK----DG---ILLLEVDRVLKPGG--YFVWTSPLT 388 (697)
Q Consensus 354 ~~~llh~~~d----~~---~~L~El~RvLKPGG--~Lvis~p~~ 388 (697)
..+ . +..+ .. .+|.++.++||||| .|++.++.+
T Consensus 155 d~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 155 DIG-E-SNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNP 196 (276)
T ss_dssp CCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred CCC-c-CCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCC
Confidence 865 2 2211 11 37899999999999 999987753
No 191
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.95 E-value=5.8e-10 Score=115.67 Aligned_cols=96 Identities=17% Similarity=0.083 Sum_probs=71.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------CcEEE--eecccCCCCCCCCccEEEe
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHC 353 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------~~~~~--~~da~~LPfpd~sFDlV~~ 353 (697)
+..+|||||||+|.++..++++ ..|+++|+++ |+..+.++.. ++.+. ++|+..++ +++||+|+|
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~s 146 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMC 146 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEE
Confidence 3479999999999999999887 3589999998 5433322222 45666 77887766 679999999
Q ss_pred ccccccccccH----H---HHHHHHHHhccCCe--EEEEEeCC
Q 005417 354 ARCGVDWDQKD----G---ILLLEVDRVLKPGG--YFVWTSPL 387 (697)
Q Consensus 354 ~~~llh~~~d~----~---~~L~El~RvLKPGG--~Lvis~p~ 387 (697)
..+ . +..+. . .+|.++.++||||| .|++.+..
T Consensus 147 d~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 147 DVG-E-SSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred eCc-c-cCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 765 2 22111 1 37899999999999 99998775
No 192
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.95 E-value=2.3e-09 Score=107.93 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=76.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccC-CC--------------
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQ-LP-------------- 342 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~-LP-------------- 342 (697)
..+|||||||+|.++..+++.......++++|.++.+++.|+++ ++. +.+..+++.. ++
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 47999999999999999998732246799999999999988765 442 5566666433 12
Q ss_pred CCC--CCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 343 YPS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 343 fpd--~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
|++ ++||+|++... .++...++.++.++|||||++++.+.
T Consensus 141 f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 333 78999998754 23456899999999999999999864
No 193
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.95 E-value=7.2e-10 Score=126.46 Aligned_cols=101 Identities=15% Similarity=0.061 Sum_probs=80.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----C-CCcEEEeecccCC--CCCCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQL--PYPSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----g-l~~~~~~~da~~L--Pfpd~sFDlV~~~~ 355 (697)
.+.+|||||||.|.++..|+++| ..|+|+|.++.+++.|+.+ + +++.+.+.+++++ ++++++||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 34689999999999999999997 4699999999999988743 4 5678888888887 57788999999999
Q ss_pred ccccccccHH--HHHHHHHHhccCCeEEEEEeCC
Q 005417 356 CGVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 356 ~llh~~~d~~--~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+ ++|.+++. ..+..+.+.|+++|..++....
T Consensus 143 ~-~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 143 V-FHHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp C-HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred c-hhcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 9 55566664 3456788888998876665543
No 194
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.92 E-value=5.8e-09 Score=108.39 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=79.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-LPfpd~sFDlV~ 352 (697)
.+.+|||||||+|.++..++++. ...+++++|+++.+++.|++.. ..+.+...|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 45899999999999999999872 3467999999999999998642 245667777654 344467999999
Q ss_pred ecccccccccc----HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 353 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 353 ~~~~llh~~~d----~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+... .++.+. ...+++++.++|||||.+++....
T Consensus 154 ~d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9754 333221 257999999999999999998654
No 195
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.92 E-value=8.8e-09 Score=100.39 Aligned_cols=94 Identities=10% Similarity=0.066 Sum_probs=72.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
...+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++..++.+.++|+..++ ++||+|+++.. +++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPP-FGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCC-C----
T ss_pred CCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCC-chhcc
Confidence 45799999999999999998874 34699999999999999887556778888888875 68999999987 44443
Q ss_pred c--HHHHHHHHHHhccCCeEEEEE
Q 005417 363 K--DGILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 363 d--~~~~L~El~RvLKPGG~Lvis 384 (697)
+ ...+++++.++| |+.+++.
T Consensus 125 ~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp ---CHHHHHHHHHHE--EEEEEEE
T ss_pred CchhHHHHHHHHHhc--CcEEEEE
Confidence 2 246899999998 5544443
No 196
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.92 E-value=4.3e-09 Score=111.89 Aligned_cols=104 Identities=14% Similarity=0.095 Sum_probs=78.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-LPfpd~sFDlV~ 352 (697)
.+.+|||||||+|.++..++++. ...+++++|+++.+++.|+++. ..+.+...|+.. ++..+++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 34799999999999999999862 3568999999999999998752 235566666544 233457899999
Q ss_pred ecccccccccc--H--HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 353 CARCGVDWDQK--D--GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 353 ~~~~llh~~~d--~--~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+... .++.+. . ..+++++.++|||||++++....+
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 8753 232211 1 579999999999999999986543
No 197
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.91 E-value=4.9e-09 Score=109.29 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=79.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCC-CCCCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQL-PYPSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~L-Pfpd~sFDlV~ 352 (697)
.+.+|||||||+|.++..++++. ...+++++|+++.+++.|++.. .++.+...|+... +..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45799999999999999998773 3568999999999999998752 2456666676542 22367899999
Q ss_pred eccccccccccH----HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 353 CARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 353 ~~~~llh~~~d~----~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+... .++.+.. ..+++++.++|||||.+++....+
T Consensus 157 ~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 157 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp EECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 9643 3332221 589999999999999999986543
No 198
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.91 E-value=4.4e-09 Score=111.69 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=75.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-LPfpd~sFDlV~ 352 (697)
.+.+|||||||+|.++..++++. ...+++++|+++.+++.|++.. ..+.+..+|+.. ++..+++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35799999999999999999873 4568999999999999998753 235566666654 333567899999
Q ss_pred eccccccccccH----HHHHHHHHHhccCCeEEEEEeC
Q 005417 353 CARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 353 ~~~~llh~~~d~----~~~L~El~RvLKPGG~Lvis~p 386 (697)
+... .++.+.. ..+++++.++|+|||.+++...
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEECC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 8753 3332221 5789999999999999999864
No 199
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.90 E-value=6.2e-09 Score=109.29 Aligned_cols=103 Identities=15% Similarity=0.034 Sum_probs=76.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccC-CCCCCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~-LPfpd~sFDlV~ 352 (697)
.+.+|||||||+|.++..++++. ...+++++|+++.+++.|++.. ..+.+...|+.. ++..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 34799999999999999999872 3467999999999999987642 245667777544 344567899999
Q ss_pred eccccccccc-----cHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 353 CARCGVDWDQ-----KDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 353 ~~~~llh~~~-----d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+... .++.. ....+++++.++|||||.+++....
T Consensus 169 ~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 8643 22111 1257899999999999999998654
No 200
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.90 E-value=2.8e-09 Score=112.83 Aligned_cols=102 Identities=14% Similarity=0.109 Sum_probs=79.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------CCcEEEeecccC-CCCCCCCccEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQ-LPYPSLSFDML 351 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------l~~~~~~~da~~-LPfpd~sFDlV 351 (697)
.+.+|||||||+|.++..++++. ...+++++|+++.+++.|++.. ..+.+..+|+.. ++..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 35799999999999999999873 3467999999999999987642 245677777655 34456799999
Q ss_pred Eeccccccc---ccc----HHHHHHHHHHhccCCeEEEEEeC
Q 005417 352 HCARCGVDW---DQK----DGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 352 ~~~~~llh~---~~d----~~~~L~El~RvLKPGG~Lvis~p 386 (697)
++... .++ .+. ...+++++.++|||||.+++...
T Consensus 156 i~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99865 444 211 25799999999999999999753
No 201
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.90 E-value=2.5e-09 Score=103.33 Aligned_cols=99 Identities=16% Similarity=0.067 Sum_probs=70.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCce--------eEEEEecCCHHHHHHHHHcCCCcEEE-eecccCCC--------CCCC
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLT--------MCIANYEASGSQVQLTLERGLPAMIG-SFASKQLP--------YPSL 346 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~--------~sV~gvD~S~~ml~~A~ergl~~~~~-~~da~~LP--------fpd~ 346 (697)
..+|||||||+|.++..++++.... ..++++|+++.+ ....+.+. .+|....+ ++++
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 96 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPGR 96 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCCC
Confidence 4799999999999999999873221 579999999832 01234555 56654432 3456
Q ss_pred CccEEEecccc---ccccccH-------HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 347 SFDMLHCARCG---VDWDQKD-------GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 347 sFDlV~~~~~l---lh~~~d~-------~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+||+|+|..+. .++..+. ..++.++.++|||||.|++.+...
T Consensus 97 ~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 97 RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 89999996541 2222222 378999999999999999987643
No 202
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.90 E-value=2.1e-09 Score=120.43 Aligned_cols=98 Identities=21% Similarity=0.213 Sum_probs=77.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||||||+|.++..+++.+ ...|+++|+|+ |++.|+++ ++ .+.+..++...++++ ++||+|+|...
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 233 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred CCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCc
Confidence 34799999999999999998864 35799999998 88777653 44 467888888887776 48999999876
Q ss_pred ccccc-ccHHHHHHHHHHhccCCeEEEEE
Q 005417 357 GVDWD-QKDGILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 357 llh~~-~d~~~~L~El~RvLKPGG~Lvis 384 (697)
.+++. ++....+.++.++|||||++++.
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 45543 33356788999999999999854
No 203
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.90 E-value=5.8e-09 Score=111.50 Aligned_cols=102 Identities=11% Similarity=0.022 Sum_probs=77.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccCCCC----CCCCccEEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQLPY----PSLSFDMLH 352 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~LPf----pd~sFDlV~ 352 (697)
..+|||+|||+|.++..+++.+. .|+++|+|+.+++.|+++ ++. +.+.++|+..+.. .+++||+|+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 46899999999999999998763 799999999999988764 443 6777777665431 156899999
Q ss_pred ecccc---------ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 353 CARCG---------VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 353 ~~~~l---------lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+.... .++..+...++.++.++|||||+|++.....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 95321 1223445689999999999999988876543
No 204
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.90 E-value=5.3e-10 Score=113.89 Aligned_cols=100 Identities=7% Similarity=-0.037 Sum_probs=77.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-CCC-----CCCccEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP-----SLSFDML 351 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-Pfp-----d~sFDlV 351 (697)
+.+|||||||+|..+..+++.......|+++|+++.+++.|+++ ++ .+.+..+++... +.. +++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 47999999999999999998632346799999999988666543 44 466777776543 221 4789999
Q ss_pred EeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 352 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 352 ~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++... ..+...++.++.++|||||++++.+..
T Consensus 141 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 141 FIDAD----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEESC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEcCC----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 98744 344567999999999999999998754
No 205
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.89 E-value=3.6e-09 Score=106.53 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=77.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeeccc----CCCCCC--CCccEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASK----QLPYPS--LSFDML 351 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~----~LPfpd--~sFDlV 351 (697)
..+|||||||+|..+..+++.......++++|.++.+++.|++. ++ .+.+..+++. .++..+ ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 47999999999999999988632245799999999999988754 44 3556666643 233434 789999
Q ss_pred EeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 352 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 352 ~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++... ..+...++.++.++|||||++++.+..
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 98754 345578999999999999999998654
No 206
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.89 E-value=3.3e-09 Score=111.99 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=77.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc---------CCCcEEEeecccC-CCCCCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------GLPAMIGSFASKQ-LPYPSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er---------gl~~~~~~~da~~-LPfpd~sFDlV~ 352 (697)
.+.+|||||||+|.++..++++. ...+++++|+++.+++.|++. ..++.+...|+.. ++..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45799999999999999999873 356899999999999998864 2345667777654 444567999999
Q ss_pred ecccccccccc----HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 353 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 353 ~~~~llh~~~d----~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+... .++.+. ...+++++.++|||||.+++....
T Consensus 174 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 8644 333221 136899999999999999998743
No 207
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.89 E-value=4.4e-09 Score=111.91 Aligned_cols=100 Identities=15% Similarity=0.075 Sum_probs=77.3
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC-----CCcEEEeecccCC--CCCCCCccEEEecccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQL--PYPSLSFDMLHCARCG 357 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg-----l~~~~~~~da~~L--Pfpd~sFDlV~~~~~l 357 (697)
.+|||||||+|.++..++++. ...+++++|+++.+++.|++.. ..+.+...|+... .+++++||+|++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~- 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF- 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-
Confidence 499999999999999999852 3457999999999999998763 2456777776554 355689999998643
Q ss_pred cccc-cc---HHHHHHHHHHhccCCeEEEEEeC
Q 005417 358 VDWD-QK---DGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 358 lh~~-~d---~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.+.. +. ...++++++++|||||+|++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 11 15799999999999999998775
No 208
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.88 E-value=1.4e-08 Score=104.99 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=80.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
+..+|||+|||+|.++..+++.+ ....|+++|.++.+++.|+++ ++ ++.+..+|+..++. +++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 34799999999999999999874 245799999999999888753 43 46678888887744 6789999988652
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+...++.++.++|||||.++++....
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 45578999999999999999988753
No 209
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.88 E-value=2.5e-09 Score=109.19 Aligned_cols=99 Identities=12% Similarity=0.036 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-C-----CCCCccE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-Y-----PSLSFDM 350 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-P-f-----pd~sFDl 350 (697)
..+|||||||+|..+..+++.......++++|+++.+++.|++. ++ .+.+..+++... + + ++++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 47999999999999999988632246799999999999988754 44 355666666442 3 2 2578999
Q ss_pred EEeccccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 351 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 351 V~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
|++... ..+...++.++.++|||||++++...
T Consensus 160 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 160 IFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EEECSC----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEcCc----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 998743 34567899999999999999998764
No 210
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.88 E-value=3.5e-09 Score=109.55 Aligned_cols=106 Identities=18% Similarity=0.112 Sum_probs=80.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCC----CCCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY----PSLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPf----pd~sFDlV~~~ 354 (697)
+.+|||+|||+|..+..+++.......|+++|+++.+++.++++ ++ ++.+...|+..++. .+++||+|++.
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 47999999999999999987522235799999999999887654 44 56677778776654 36789999986
Q ss_pred ccc-----cc------------ccccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 355 RCG-----VD------------WDQKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 355 ~~l-----lh------------~~~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
... ++ .......+|.++.++|||||++++++....
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 210 11 113446799999999999999999986553
No 211
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.87 E-value=2.8e-09 Score=114.04 Aligned_cols=99 Identities=11% Similarity=0.066 Sum_probs=79.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
...+|||||||+|.++..++++. +...++++|. +.+++.|++. ..+.+...|... +++ +||+|++..+ +|+.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~v-lh~~~ 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWV-LHDWN 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESC-GGGSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEccc-ccCCC
Confidence 34799999999999999999874 3457899999 7888776542 246677777766 666 4999999998 55445
Q ss_pred cHH--HHHHHHHHhccC---CeEEEEEeCCC
Q 005417 363 KDG--ILLLEVDRVLKP---GGYFVWTSPLT 388 (697)
Q Consensus 363 d~~--~~L~El~RvLKP---GG~Lvis~p~~ 388 (697)
+.. .+|+++.++||| ||++++.++..
T Consensus 266 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 266 DEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp HHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 555 899999999999 99999988643
No 212
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.87 E-value=1e-08 Score=113.64 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=81.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCCCCccEEEec--
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCA-- 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LP--fpd~sFDlV~~~-- 354 (697)
+.+|||+|||+|..+..+++.......++++|+++.+++.++++ |+ ++.+.+.|+..++ +++++||+|++.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 47999999999999999988632235799999999999887654 55 5677778887776 666789999962
Q ss_pred ---cccccccccH----------------HHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 355 ---RCGVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 355 ---~~llh~~~d~----------------~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
...++..++. ..+|.++.++|||||++++++.....
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 1223322222 46899999999999999999876543
No 213
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.85 E-value=4.2e-09 Score=104.51 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=76.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-CC--C--CCccEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YP--S--LSFDML 351 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-P-fp--d--~sFDlV 351 (697)
..+|||||||+|.++..+++.......++++|.++.+++.|+++ ++ .+.+..+++... + ++ . ++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 47999999999999999998632246799999999999988764 43 456666665432 1 21 1 689999
Q ss_pred EeccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 352 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 352 ~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++... ..+...++.++.++|||||++++.+..
T Consensus 150 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 150 VVDAD----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EECSC----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 98754 334568999999999999999997653
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.85 E-value=7.9e-09 Score=107.56 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=75.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------------CCcEEEeecccC-CCCCCC
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------------LPAMIGSFASKQ-LPYPSL 346 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------------l~~~~~~~da~~-LPfpd~ 346 (697)
.+.+|||||||+|.++..++++ ...+++++|+++.+++.|++.. ..+.+...|+.. ++. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 3479999999999999999987 3568999999999999998652 234566666543 222 57
Q ss_pred CccEEEecccccccccc----HHHHHHHHHHhccCCeEEEEEeC
Q 005417 347 SFDMLHCARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 347 sFDlV~~~~~llh~~~d----~~~~L~El~RvLKPGG~Lvis~p 386 (697)
+||+|++... .++.+. ...+++++.++|+|||.+++...
T Consensus 152 ~fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 152 GFDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CEEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8999998754 333221 25689999999999999999754
No 215
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.85 E-value=6.5e-09 Score=113.07 Aligned_cols=96 Identities=22% Similarity=0.225 Sum_probs=74.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH----cCC--CcEEEeecccCCCCCCCCccEEEeccc-
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE----RGL--PAMIGSFASKQLPYPSLSFDMLHCARC- 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~e----rgl--~~~~~~~da~~LPfpd~sFDlV~~~~~- 356 (697)
+.+|||||||+|.++..+++.|. ..|+++|.|+ |++.|++ .++ .+.+...+++.+.++ +.||+|+|...
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMG 159 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCB
T ss_pred CCEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccc
Confidence 47899999999999998888863 4689999985 6666653 344 466778888888887 58999998532
Q ss_pred -cccccccHHHHHHHHHHhccCCeEEEE
Q 005417 357 -GVDWDQKDGILLLEVDRVLKPGGYFVW 383 (697)
Q Consensus 357 -llh~~~d~~~~L~El~RvLKPGG~Lvi 383 (697)
.+.+......++....|.|||||.++.
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccchhhhHHHHHHhhCCCCceECC
Confidence 133334567889999999999999873
No 216
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.84 E-value=9.2e-10 Score=111.52 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=70.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCC---CCC---CCCccE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQL---PYP---SLSFDM 350 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~L---Pfp---d~sFDl 350 (697)
...+|||+|||+|.++..++++. ....++++|+++.|++.|+++ ++. +.+..+|+... +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 35799999999999999888762 235799999999999988754 443 67777776552 454 368999
Q ss_pred EEecccccccc--------------ccHHHHHHHHHHhccCCeEEEEEe
Q 005417 351 LHCARCGVDWD--------------QKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 351 V~~~~~llh~~--------------~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
|+|+...++.. .....++.++.|+|||||.+.+..
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 99985522211 011245678899999999877653
No 217
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.82 E-value=9.8e-09 Score=106.19 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=74.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---------CCcEEEeecccCCCCCCCCccEEEe
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPYPSLSFDMLHC 353 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---------l~~~~~~~da~~LPfpd~sFDlV~~ 353 (697)
.+.+|||||||+|.++..++++ . .+++++|+++.+++.|++.. ..+.+...|+.... ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 4579999999999999999887 3 68999999999999887642 23566667776654 78999998
Q ss_pred ccccccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 354 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 354 ~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
.. .++..+++++.++|||||.+++....
T Consensus 146 d~------~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 146 LQ------EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp SS------CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CC------CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 73 23456999999999999999997543
No 218
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.81 E-value=1.2e-08 Score=106.55 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=74.1
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCc---cEEEecc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSF---DMLHCAR 355 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sF---DlV~~~~ 355 (697)
.+|||+|||+|.++..+++. ....++++|+|+.+++.|+++ ++. +.+.+.|... +++ ++| |+|+++.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNP 200 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECC
T ss_pred CEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcC
Confidence 68999999999999999987 456799999999999988754 443 6777777655 233 479 9999973
Q ss_pred cccc----------cc--------ccHHHHHHHHH-HhccCCeEEEEEeC
Q 005417 356 CGVD----------WD--------QKDGILLLEVD-RVLKPGGYFVWTSP 386 (697)
Q Consensus 356 ~llh----------~~--------~d~~~~L~El~-RvLKPGG~Lvis~p 386 (697)
-.+. +. .+...+++++. +.|+|||++++...
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 2110 11 11126899999 99999999999654
No 219
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.80 E-value=2e-09 Score=113.83 Aligned_cols=100 Identities=16% Similarity=0.122 Sum_probs=68.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecC----CHHHHHHHHHc--C-CCcEEEee-cccCCCCCCCCccEEEec
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEA----SGSQVQLTLER--G-LPAMIGSF-ASKQLPYPSLSFDMLHCA 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~----S~~ml~~A~er--g-l~~~~~~~-da~~LPfpd~sFDlV~~~ 354 (697)
++.+|||||||+|.++..++++ ..|+++|+ ++.+++.+..+ + ..+.+.+. |+..+| .++||+|+|.
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd 155 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCD 155 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEEC
Confidence 3479999999999999999987 24788998 45443222111 1 13455555 665554 5689999997
Q ss_pred cccc--cccccHH---HHHHHHHHhccCCeEEEEEeCCC
Q 005417 355 RCGV--DWDQKDG---ILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 355 ~~ll--h~~~d~~---~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.+.. ++..+.. .+|.++.++|||||.|++..+.+
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 6521 2222222 47899999999999999977654
No 220
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.80 E-value=4.3e-08 Score=105.95 Aligned_cols=100 Identities=15% Similarity=0.066 Sum_probs=78.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccC-CCC-CCCCccEEEecc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPY-PSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~-LPf-pd~sFDlV~~~~ 355 (697)
.+.+|||+| |+|.++..++..+. ...++++|+++.|++.|+++ ++ ++.+..+|+.. +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 357999999 99999999988752 35799999999999988765 55 67788888887 764 457899999986
Q ss_pred ccccccccHHHHHHHHHHhccCCeE-EEEEeC
Q 005417 356 CGVDWDQKDGILLLEVDRVLKPGGY-FVWTSP 386 (697)
Q Consensus 356 ~llh~~~d~~~~L~El~RvLKPGG~-Lvis~p 386 (697)
. ++... ...++.++.++|||||. ++++..
T Consensus 250 p-~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 P-ETLEA-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp C-SSHHH-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred C-CchHH-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 5 33222 46899999999999994 455554
No 221
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.79 E-value=1.2e-08 Score=100.30 Aligned_cols=95 Identities=12% Similarity=0.015 Sum_probs=69.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCC-----------CCCccEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP-----------SLSFDML 351 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfp-----------d~sFDlV 351 (697)
++.+|||+|||+|.++..++++ ...|+++|+++.. ....+.+.++|+...+.. .++||+|
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~V 95 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDV 95 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEE
Confidence 3489999999999999999987 4579999998741 123567777887765521 1489999
Q ss_pred Eeccccccc----ccc-------HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 352 HCARCGVDW----DQK-------DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 352 ~~~~~llh~----~~d-------~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
+|... ... ..+ ...++.++.++|||||.|++....
T Consensus 96 lsd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 96 VSDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp EECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ecCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 99643 111 111 246789999999999999987764
No 222
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.79 E-value=2.8e-08 Score=101.22 Aligned_cols=119 Identities=14% Similarity=0.056 Sum_probs=89.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
+.+|||||||+|.++..+++.+ ....|+++|+++.+++.|++. ++ .+.+..+|......+++.||+|+..+..
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 4789999999999999999885 456799999999999988754 44 3667777877666555579998865541
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEeee
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 420 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~~ 420 (697)
- +-...+|.+..+.|+++|+|+++.... ...++.+....+|....+
T Consensus 101 g---~lI~~IL~~~~~~l~~~~~lIlqp~~~--------------~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 101 G---RLIADILNNDIDKLQHVKTLVLQPNNR--------------EDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp H---HHHHHHHHHTGGGGTTCCEEEEEESSC--------------HHHHHHHHHHTTEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCcCCEEEEECCCC--------------hHHHHHHHHHCCCEEEEE
Confidence 1 123568899999999999999987421 234566677778887654
No 223
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.78 E-value=1.2e-07 Score=92.41 Aligned_cols=94 Identities=12% Similarity=0.060 Sum_probs=73.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
...+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++++.+..+|+..++ ++||+|+++.. +
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~ 122 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP-F 122 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCC-C
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCC-C
Confidence 457999999999999999998853 3699999999999998865 346778888888764 48999999876 4
Q ss_pred cccc--cHHHHHHHHHHhccCCeEEEEE
Q 005417 359 DWDQ--KDGILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 359 h~~~--d~~~~L~El~RvLKPGG~Lvis 384 (697)
+... ....++.++.++| ||.+++.
T Consensus 123 ~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 123 GSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred ccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 4332 2357899999998 6655544
No 224
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.78 E-value=1.6e-08 Score=111.27 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=81.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCC--CCCCCccEEEec---
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP--YPSLSFDMLHCA--- 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LP--fpd~sFDlV~~~--- 354 (697)
+.+|||+|||+|..+..+++... ...++++|+++.+++.++++ ++++.+.+.|+..++ +++++||+|++.
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred cCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCC
Confidence 47999999999999999998743 26799999999998877654 667778888887776 666799999962
Q ss_pred -cc-cccccccH----------------HHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 355 -RC-GVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 355 -~~-llh~~~d~----------------~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.. .++..++. ..+|.++.++|||||++++++....
T Consensus 326 sg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp CCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred CcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 21 12222221 3689999999999999999986554
No 225
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.78 E-value=1.2e-08 Score=103.14 Aligned_cols=99 Identities=10% Similarity=-0.006 Sum_probs=76.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCC-C-C-----CCCCccE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-Y-----PSLSFDM 350 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~L-P-f-----pd~sFDl 350 (697)
..+|||||||+|..+..+++.-.....++++|+++.+++.|++. ++ .+.+..+++... + + ++++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 47999999999999999988632246799999999999988753 44 355666665432 2 2 2578999
Q ss_pred EEeccccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 351 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 351 V~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
|++... ..+...++.++.++|||||++++...
T Consensus 151 I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 151 GFVDAD----KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEECCc----hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 997643 34456899999999999999998764
No 226
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.78 E-value=3e-08 Score=101.82 Aligned_cols=119 Identities=15% Similarity=0.087 Sum_probs=88.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
+.+|||||||+|.++..+++.+ ....++++|+++.+++.|+++ ++. +.+..+|......+++.||+|+..+..
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 4789999999999999999885 456799999999999988765 553 567777766655554469999876541
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEeee
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 420 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~~ 420 (697)
- .-...+|.+..+.|+++|+|+++... ....++.+....+|....+
T Consensus 101 g---~lI~~IL~~~~~~L~~~~~lIlq~~~--------------~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 101 G---TLIRTILEEGAAKLAGVTKLILQPNI--------------AAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp H---HHHHHHHHHTGGGGTTCCEEEEEESS--------------CHHHHHHHHHHHTEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCCCCEEEEEcCC--------------ChHHHHHHHHHCCCEEEEE
Confidence 1 12356899999999999999998642 1234566677778876543
No 227
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.76 E-value=1.5e-08 Score=113.10 Aligned_cols=107 Identities=22% Similarity=0.281 Sum_probs=79.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCC-CCCCCccEEEe----c
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP-YPSLSFDMLHC----A 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LP-fpd~sFDlV~~----~ 354 (697)
+.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+.+.+.+.|+..++ +.+++||+|++ +
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcS 181 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCS 181 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCC
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcC
Confidence 48999999999999999997633335799999999999887654 666677777877765 34679999995 2
Q ss_pred cc-ccccccc----------------HHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 355 RC-GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 355 ~~-llh~~~d----------------~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
.. .+...++ ...+|.++.++|||||+|++++-....
T Consensus 182 g~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 182 GEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp CGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 11 1111111 156899999999999999999865543
No 228
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.76 E-value=1.8e-08 Score=105.10 Aligned_cols=107 Identities=21% Similarity=0.165 Sum_probs=77.8
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----C--CcEEE
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L--PAMIG 334 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l--~~~~~ 334 (697)
....+.+.+.+...+ ..+|||||||+|.++..|++.+ ..++++|+++.|++.++++. . ++.+.
T Consensus 14 ~~i~~~i~~~~~~~~--------~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 82 (285)
T 1zq9_A 14 PLIINSIIDKAALRP--------TDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVL 82 (285)
T ss_dssp HHHHHHHHHHTCCCT--------TCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE
T ss_pred HHHHHHHHHhcCCCC--------CCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 344555665554433 3799999999999999999885 36999999999999988752 2 46778
Q ss_pred eecccCCCCCCCCccEEEeccccccccccHH-HHH--------------HHH--HHhccCCeEE
Q 005417 335 SFASKQLPYPSLSFDMLHCARCGVDWDQKDG-ILL--------------LEV--DRVLKPGGYF 381 (697)
Q Consensus 335 ~~da~~LPfpd~sFDlV~~~~~llh~~~d~~-~~L--------------~El--~RvLKPGG~L 381 (697)
.+|+..++++ +||+|+++.. +++..+.- .+| +|+ +++|+|||.+
T Consensus 83 ~~D~~~~~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 83 VGDVLKTDLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp ESCTTTSCCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred Ecceecccch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 8888887776 7999999765 56543221 222 233 3699999986
No 229
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.75 E-value=5.1e-08 Score=104.55 Aligned_cols=102 Identities=21% Similarity=0.185 Sum_probs=80.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC-----CCcEEEeecccCCCCCCCCccEEEecccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg-----l~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
...+|||||||+|.++..++++. +...++..|. +.+++.|+++. -.+.+..+|....|.+ .+|+|++..++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 45799999999999999999884 5567788887 77888887652 2466777777665555 47999999996
Q ss_pred ccccccH-HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKD-GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~-~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
++|.++. ..+|++++++|+|||.++|.+...
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 6665432 478999999999999999998754
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.75 E-value=4.8e-08 Score=105.73 Aligned_cols=101 Identities=17% Similarity=0.005 Sum_probs=76.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
...+|||+|||+|.++..++..+. ...++|+|+++.|++.|+++ ++ .+.+.++|+..+++++++||+|+|+..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 347899999999999999998753 23699999999999988754 55 578889999999988889999999754
Q ss_pred ccccc------cc-HHHHHHHHHHhccCCeEEEEEeC
Q 005417 357 GVDWD------QK-DGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 357 llh~~------~d-~~~~L~El~RvLKPGG~Lvis~p 386 (697)
..... .+ ...++.++.++| ||.+++...
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~ 330 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT 330 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEES
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC
Confidence 21111 11 146888999999 555555544
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.71 E-value=3.4e-08 Score=110.69 Aligned_cols=106 Identities=20% Similarity=0.233 Sum_probs=79.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCC-CCCCccEEEec---
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY-PSLSFDMLHCA--- 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPf-pd~sFDlV~~~--- 354 (697)
+.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+ ++.+.+.|+..++. .+++||+|++.
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~Pc 197 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCc
Confidence 47999999999999999998632345799999999999887654 55 46677778777653 45789999972
Q ss_pred -cc-ccccccc----------------HHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 355 -RC-GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 355 -~~-llh~~~d----------------~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.. .+...++ ...+|.++.++|||||+|++++....
T Consensus 198 Sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 198 SGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 11 1111111 13689999999999999999986543
No 232
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.71 E-value=6.8e-08 Score=98.05 Aligned_cols=118 Identities=13% Similarity=0.082 Sum_probs=85.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeeccc-CCCCCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASK-QLPYPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~-~LPfpd~sFDlV~~~~~ 356 (697)
+.+|||||||+|.++..+++.+ +...|+++|+++.+++.|++. ++. +.+...|.. .++. ...||+|+..+.
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~ 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAGM 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcCC
Confidence 4789999999999999999875 456799999999999888754 553 566666652 3332 126999987654
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEeee
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 420 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll~~ 420 (697)
.- .-...+|.+....|+|+|+|+++... . ...++.+....+|....+
T Consensus 94 Gg---~~i~~Il~~~~~~L~~~~~lVlq~~~-~-------------~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 94 GG---RLIARILEEGLGKLANVERLILQPNN-R-------------EDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp CH---HHHHHHHHHTGGGCTTCCEEEEEESS-C-------------HHHHHHHHHHTTEEEEEE
T ss_pred Ch---HHHHHHHHHHHHHhCCCCEEEEECCC-C-------------HHHHHHHHHHCCCEEEEE
Confidence 11 11357899999999999999997552 1 234556667778877654
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.65 E-value=4.8e-08 Score=106.80 Aligned_cols=103 Identities=15% Similarity=0.016 Sum_probs=76.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCC-CCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~L-Pfpd~sFDlV~~~~~ll 358 (697)
+.+|||+|||+|.++..+++.|. .|+++|+|+.+++.|+++ ++...+.++|+..+ +...+.||+|++....+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 57999999999999999998753 399999999999888754 56656667776553 22233499999874422
Q ss_pred cc--------cccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 359 DW--------DQKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 359 h~--------~~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.. ..+...++.++.++|||||+|++++....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 21 12234788999999999999997776443
No 234
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.65 E-value=4.4e-08 Score=106.53 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=77.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC---CcEEEeecccC-CCC---CCCCccEEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQ-LPY---PSLSFDMLH 352 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl---~~~~~~~da~~-LPf---pd~sFDlV~ 352 (697)
..+|||+|||+|.++..+++.+ ...|+++|+|+.+++.|++. ++ ++.+.++|+.. ++. ..++||+|+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4799999999999999999875 34799999999999888754 44 46777777655 221 245899999
Q ss_pred eccccc----ccc----ccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 353 CARCGV----DWD----QKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 353 ~~~~ll----h~~----~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+..... ... .+...++.++.++|+|||+++++.....
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 864322 122 2234577888999999999999986543
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.63 E-value=7.5e-08 Score=104.76 Aligned_cols=103 Identities=13% Similarity=0.046 Sum_probs=79.3
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC---CcEEEeecccCCCC----CCCCccEEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLPY----PSLSFDMLH 352 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl---~~~~~~~da~~LPf----pd~sFDlV~ 352 (697)
..+|||+|||+|.++..+++.+ ...|+++|+++.+++.|++. ++ ++.+..+|+..+.. .+++||+|+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4799999999999999999875 34799999999999888754 55 46777777655421 146899999
Q ss_pred ecccc--------ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 353 CARCG--------VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 353 ~~~~l--------lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+..-. .........++.++.++|+|||+++++....
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 97431 1122345678999999999999999988654
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.62 E-value=6.6e-08 Score=103.06 Aligned_cols=104 Identities=17% Similarity=0.202 Sum_probs=79.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCc----eeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEec
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELL----TMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCA 354 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~----~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~ 354 (697)
...+|||+|||+|.++..+++.... ...++|+|+++.+++.|+.. ++.+.+..+|+.. +.+.+.||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEEC
Confidence 3479999999999999988876311 26799999999999988753 6677777777655 3345789999999
Q ss_pred cccccccccH------------------HHHHHHHHHhccCCeEEEEEeCCC
Q 005417 355 RCGVDWDQKD------------------GILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 355 ~~llh~~~d~------------------~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.. +++.+.. ..++.++.+.|||||++++..|..
T Consensus 209 PP-fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 209 LP-VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CC-CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CC-CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 66 3222111 157999999999999999998743
No 237
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.59 E-value=1.2e-07 Score=105.46 Aligned_cols=107 Identities=18% Similarity=0.170 Sum_probs=77.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-cEEEeecccCCC-CCCCCccEEEeccc-
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLP-YPSLSFDMLHCARC- 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da~~LP-fpd~sFDlV~~~~~- 356 (697)
+.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+. +.+...|+..++ +.+++||+|++..-
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 48999999999999999987622235799999999999877653 553 556667776664 34579999997421
Q ss_pred ----ccccccc----------------HHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 357 ----GVDWDQK----------------DGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 357 ----llh~~~d----------------~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
.+...++ ...+|.++.++|||||+|++++-....
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 1111111 126799999999999999999875543
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.59 E-value=5.1e-08 Score=114.00 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=79.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccC-CCCCCCCccEEEecc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQ-LPYPSLSFDMLHCAR 355 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~-LPfpd~sFDlV~~~~ 355 (697)
+.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|+++ ++. +.+.++|+.. ++..+++||+|++..
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 47899999999999999998753 4699999999999988764 443 6777777765 444567999999964
Q ss_pred cc----------ccccccHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 356 CG----------VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 356 ~l----------lh~~~d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
-. .+...+...++.++.++|+|||+|+++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 32 122234457899999999999999998865
No 239
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.59 E-value=1.1e-07 Score=99.88 Aligned_cols=86 Identities=15% Similarity=0.258 Sum_probs=62.1
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEee
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSF 336 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~ 336 (697)
...+.+.+.+.... ..+|||||||+|.++..|++.+ ..++++|+++.+++.++++ +. ++.+..+
T Consensus 29 ~i~~~i~~~~~~~~--------~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~ 97 (299)
T 2h1r_A 29 GILDKIIYAAKIKS--------SDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEG 97 (299)
T ss_dssp HHHHHHHHHHCCCT--------TCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEC---
T ss_pred HHHHHHHHhcCCCC--------cCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 34455555554433 3799999999999999999874 4699999999999988764 33 4667777
Q ss_pred cccCCCCCCCCccEEEecccccccc
Q 005417 337 ASKQLPYPSLSFDMLHCARCGVDWD 361 (697)
Q Consensus 337 da~~LPfpd~sFDlV~~~~~llh~~ 361 (697)
|+..++++ +||+|+++.. +++.
T Consensus 98 D~~~~~~~--~~D~Vv~n~p-y~~~ 119 (299)
T 2h1r_A 98 DAIKTVFP--KFDVCTANIP-YKIS 119 (299)
T ss_dssp -CCSSCCC--CCSEEEEECC-GGGH
T ss_pred chhhCCcc--cCCEEEEcCC-cccc
Confidence 88777764 7999999865 5554
No 240
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.59 E-value=5.3e-08 Score=105.90 Aligned_cols=105 Identities=14% Similarity=0.008 Sum_probs=79.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCC----CCCCccEEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPY----PSLSFDMLH 352 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPf----pd~sFDlV~ 352 (697)
...+|||+|||+|.++..+++.+ ...|+++|+++.+++.|++. ++ ++.+..+|+..+.. ++++||+|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 34799999999999999999874 34799999999999888754 44 46777777655421 257899999
Q ss_pred ecccccc--------ccccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 353 CARCGVD--------WDQKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 353 ~~~~llh--------~~~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
+..-.+. ...+...++.++.++|+|||+++++.....
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 9643211 113345789999999999999999887543
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.58 E-value=6.1e-08 Score=105.06 Aligned_cols=103 Identities=18% Similarity=0.115 Sum_probs=78.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC-cEEEeecccCCCC----CCCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLPY----PSLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~-~~~~~~da~~LPf----pd~sFDlV~~~ 354 (697)
..+|||+|||+|.++..+++. ...|+++|+++.+++.|++. ++. +.+.++|+..... .+++||+|++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 378999999999999999986 46799999999999888754 443 6677777655421 25789999986
Q ss_pred ccccc--------ccccHHHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 355 RCGVD--------WDQKDGILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 355 ~~llh--------~~~d~~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.-.+. .......++.++.++|+|||+++++.....
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 43211 112345689999999999999999986543
No 242
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.58 E-value=1.9e-07 Score=98.16 Aligned_cols=94 Identities=12% Similarity=-0.058 Sum_probs=66.8
Q ss_pred CCCEEEEeCC------CCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEE-EeecccCCCCCCCCccEEEecc
Q 005417 283 GVRTILDIGC------GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-GSFASKQLPYPSLSFDMLHCAR 355 (697)
Q Consensus 283 ~~~~VLDIGC------GtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~-~~~da~~LPfpd~sFDlV~~~~ 355 (697)
+..+|||+|| |+|. ..+++.......|+++|+++. + ..+.+ .++|+..++++ ++||+|+|+.
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~~v~~~i~gD~~~~~~~-~~fD~Vvsn~ 131 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------SDADSTLIGDCATVHTA-NKWDLIISDM 131 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------CSSSEEEESCGGGCCCS-SCEEEEEECC
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------CCCEEEEECccccCCcc-CcccEEEEcC
Confidence 4579999999 5576 334433212357999999987 2 24667 88898888775 6899999974
Q ss_pred cccccc-----------ccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 356 CGVDWD-----------QKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 356 ~llh~~-----------~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
. .++. .....+++++.|+|||||.|++..+..
T Consensus 132 ~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 132 Y-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp C-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred C-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 3 2210 112478999999999999999987643
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.58 E-value=1e-07 Score=103.43 Aligned_cols=99 Identities=19% Similarity=0.119 Sum_probs=73.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccc---
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW--- 360 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~--- 360 (697)
..+|||+|||+|.++..++++......++|+|+++.+++.| ..+.+.+.|....+. +++||+|+++--....
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLWEP-GEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGCCC-SSCEEEEEECCCCCCBSCT
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhcCc-cCCCCEEEECcCccCcccc
Confidence 36999999999999999987521235799999999998777 356677777766643 4689999997331111
Q ss_pred ------c-ccH------------------HHHHHHHHHhccCCeEEEEEeCC
Q 005417 361 ------D-QKD------------------GILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 361 ------~-~d~------------------~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
. ++. ..++..+.++|+|||++++..|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 0 111 15688999999999999999874
No 244
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.56 E-value=3.1e-07 Score=96.02 Aligned_cols=122 Identities=7% Similarity=0.114 Sum_probs=85.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC--cEEEeecccCCCCCCCCccEEEeccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP--AMIGSFASKQLPYPSLSFDMLHCARC 356 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~--~~~~~~da~~LPfpd~sFDlV~~~~~ 356 (697)
.+.+|||+|||+|.++..+++++ ...|+++|+++.+++.+++. ++. +.+..+|+..++. .+.||.|++...
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p 201 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC
Confidence 34899999999999999999886 34699999999999887653 443 5567778777654 468999997743
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeCCCChhhhhhhHHhhhhhhhhhhhhhccceEEe
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 418 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~~~~~~lr~~e~~~~W~~l~~la~~~~w~ll 418 (697)
+....+|..+.++|||||++.+........ ......+.++.+++..+++..
T Consensus 202 -----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~------~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 -----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL------MPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTTTHHHHHHHHHHTTCEEE
T ss_pred -----CcHHHHHHHHHHHcCCCCEEEEEeeecccc------cchhHHHHHHHHHHHcCCcEE
Confidence 223468888999999999998765432110 011223445556666666543
No 245
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.56 E-value=1.1e-07 Score=97.56 Aligned_cols=96 Identities=10% Similarity=0.005 Sum_probs=75.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
.+.+|||||||+|.++..+. ....++++|+++.+++++++. +.+..+...|....+.+. +||+|++.-+ +
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~-l 178 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKL-L 178 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESC-H
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHH-H
Confidence 45899999999999999887 346799999999999988754 667778888887777765 9999999877 5
Q ss_pred cccccH-HHHHHHHHHhccCCeEEEEE
Q 005417 359 DWDQKD-GILLLEVDRVLKPGGYFVWT 384 (697)
Q Consensus 359 h~~~d~-~~~L~El~RvLKPGG~Lvis 384 (697)
|+.++. ...+.++...|+++|.++-.
T Consensus 179 h~LE~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred HHhhhhchhhHHHHHHHhcCCCEEEEc
Confidence 555333 23444888899999766543
No 246
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.54 E-value=5.3e-09 Score=106.23 Aligned_cols=110 Identities=16% Similarity=0.167 Sum_probs=76.9
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecc
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFAS 338 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da 338 (697)
...+.+.+.+.... ..+|||||||+|.++..+++++ ..++++|+++.+++.|+++. .++.+..+|+
T Consensus 16 ~~~~~i~~~~~~~~--------~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~ 84 (245)
T 1yub_A 16 KVLNQIIKQLNLKE--------TDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI 84 (245)
T ss_dssp TTHHHHHHHCCCCS--------SEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC
T ss_pred HHHHHHHHhcCCCC--------CCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECCh
Confidence 34455666655433 3789999999999999999885 56999999999998876642 2466778898
Q ss_pred cCCCCCC-CCccEEEecccccccc-----------ccHHHHH----HHHHHhccCCeEEEEE
Q 005417 339 KQLPYPS-LSFDMLHCARCGVDWD-----------QKDGILL----LEVDRVLKPGGYFVWT 384 (697)
Q Consensus 339 ~~LPfpd-~sFDlV~~~~~llh~~-----------~d~~~~L----~El~RvLKPGG~Lvis 384 (697)
..+++++ ++| .|+++.. ++.. .....++ +.+.|+|+|||.+.+.
T Consensus 85 ~~~~~~~~~~f-~vv~n~P-y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIP-YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp TTTTCCCSSEE-EEEEECC-SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred hhcCcccCCCc-EEEEeCC-ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 8888874 689 6777633 2221 1111233 5578888888876664
No 247
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.54 E-value=1.9e-07 Score=95.11 Aligned_cols=72 Identities=17% Similarity=0.174 Sum_probs=57.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeecccCCCCCC-CCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPS-LSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~da~~LPfpd-~sFDlV~~~~~ll 358 (697)
...+|||||||+|.++..+++++ ..++++|+++.+++.++++. .++.+..+|+..+++++ ..| .|+++.. +
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~nlP-y 104 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGNIP-Y 104 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEECC-G
T ss_pred CCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEeCC-c
Confidence 34799999999999999999885 56999999999999998763 35778889999998874 455 4556543 4
Q ss_pred c
Q 005417 359 D 359 (697)
Q Consensus 359 h 359 (697)
+
T Consensus 105 ~ 105 (244)
T 1qam_A 105 N 105 (244)
T ss_dssp G
T ss_pred c
Confidence 4
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.51 E-value=7.5e-07 Score=98.28 Aligned_cols=95 Identities=16% Similarity=0.246 Sum_probs=71.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
...+|||+|||+|.++..|++.+ ..|+++|.++.+++.|+++ ++.+.+..+|+..+... +||+|++.....
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRA 364 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTT
T ss_pred CCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCcc
Confidence 34799999999999999999874 4699999999999888754 55577888888776432 899999864411
Q ss_pred cccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 359 DWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 359 h~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.....++..+. .|+|||.++++..
T Consensus 365 ---g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 365 ---GLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp ---CSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred ---chHHHHHHHHH-hcCCCcEEEEECC
Confidence 11234555554 5999999999864
No 249
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.48 E-value=2.8e-07 Score=98.35 Aligned_cols=93 Identities=10% Similarity=0.064 Sum_probs=74.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC--CcEEEeecccCCCCCCCCccEEEecccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 357 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~l 357 (697)
+.+|||+|||+|.++.. ++. ...++++|.++.+++.|++. ++ ++.+..+|+..+. ++||+|++...
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP- 267 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP- 267 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT-
T ss_pred CCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc-
Confidence 47999999999999999 773 45799999999999888754 44 4677888887765 78999998633
Q ss_pred ccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 358 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 358 lh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
. ....++.++.++|+|||.+++.+...
T Consensus 268 ~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 268 K----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp T----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred H----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 1 12368999999999999999987644
No 250
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.48 E-value=4e-07 Score=94.32 Aligned_cols=101 Identities=12% Similarity=0.044 Sum_probs=78.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCCcEEEeecccCCCCCCCCccEEEeccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~~~~~~~da~~LPfpd~sFDlV~~~~~ll 358 (697)
.+.+|||||||+|.++..++... ....++++|+++.|++++++. |++..+.+.|...-+ +.+.||+|++.-+ +
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkt-i 208 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKT-L 208 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTC-H
T ss_pred CCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHH-H
Confidence 35799999999999999988763 567899999999999888754 677777777755444 5578999999987 6
Q ss_pred cccccH-HHHHHHHHHhccCCeEEEEEeC
Q 005417 359 DWDQKD-GILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 359 h~~~d~-~~~L~El~RvLKPGG~Lvis~p 386 (697)
|+.++. ...+-++...|+|+|.++-...
T Consensus 209 ~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 209 PCLETQQRGSGWEVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHHHHSTTHHHHHHHHSSCSEEEEEEEC
T ss_pred HHhhhhhhHHHHHHHHHhCCCCEEEeccc
Confidence 655444 2233399999999998875443
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.43 E-value=5.8e-07 Score=94.68 Aligned_cols=88 Identities=15% Similarity=0.116 Sum_probs=70.4
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeec
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFA 337 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~d 337 (697)
....+.+.+.+...++ .+|||||||+|.++..|++.+ ..|+++|+++.+++.++++. .++.+..+|
T Consensus 36 ~~i~~~Iv~~l~~~~~--------~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD 104 (295)
T 3gru_A 36 KNFVNKAVESANLTKD--------DVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECc
Confidence 3455566666654443 799999999999999999874 56999999999999887652 467888899
Q ss_pred ccCCCCCCCCccEEEeccccccc
Q 005417 338 SKQLPYPSLSFDMLHCARCGVDW 360 (697)
Q Consensus 338 a~~LPfpd~sFDlV~~~~~llh~ 360 (697)
+..+++++.+||+|+++.. +++
T Consensus 105 ~l~~~~~~~~fD~Iv~NlP-y~i 126 (295)
T 3gru_A 105 ALKVDLNKLDFNKVVANLP-YQI 126 (295)
T ss_dssp TTTSCGGGSCCSEEEEECC-GGG
T ss_pred hhhCCcccCCccEEEEeCc-ccc
Confidence 9999998889999998855 544
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.42 E-value=1e-06 Score=97.15 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=71.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccC----CCCCCCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ----LPYPSLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~----LPfpd~sFDlV~~~ 354 (697)
..+|||+|||+|.++..|++. ...|+++|+|+.+++.|+++ ++ ++.+..+|+.. +++++++||+|++.
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 478999999999999999987 35799999999999988753 44 57788888766 45667899999987
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
-- ..-. ..++..+. .++|++.++++..
T Consensus 364 PP-r~g~---~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 364 PA-RAGA---AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp CC-TTCC---HHHHHHHH-HHCCSEEEEEESC
T ss_pred CC-CccH---HHHHHHHH-hcCCCeEEEEECC
Confidence 43 1111 24555554 3789999888754
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.41 E-value=4.2e-07 Score=100.52 Aligned_cols=116 Identities=17% Similarity=0.130 Sum_probs=82.6
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcC------------CceeEEEEecCCHHHHHHHHH---
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKE------------LLTMCIANYEASGSQVQLTLE--- 326 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g------------~~~~sV~gvD~S~~ml~~A~e--- 326 (697)
...+.+.+++... ...+|||.|||+|.++..+++.- .....++|+|+++.+++.|+.
T Consensus 158 ~v~~~mv~~l~~~--------~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 158 PLIQAMVDCINPQ--------MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHHHCCC--------TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC--------CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 3444555555432 34789999999999998887641 023469999999999998875
Q ss_pred -cCC---CcEEEeecccCCCCCCCCccEEEeccccccc--ccc--------------HHHHHHHHHHhccCCeEEEEEeC
Q 005417 327 -RGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVDW--DQK--------------DGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 327 -rgl---~~~~~~~da~~LPfpd~sFDlV~~~~~llh~--~~d--------------~~~~L~El~RvLKPGG~Lvis~p 386 (697)
+++ ...+.++|+...+... +||+|+++...... ... ...++..+.++|||||++++..|
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~~-~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPST-LVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCSS-CEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCCcCCCCEeeCCCCCCcccC-CcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 355 4567777876666543 89999998552221 110 13689999999999999999887
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.30 E-value=9.5e-07 Score=95.46 Aligned_cols=104 Identities=13% Similarity=0.024 Sum_probs=75.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------------CcEEEeecccCCCC----CC
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------------PAMIGSFASKQLPY----PS 345 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------------~~~~~~~da~~LPf----pd 345 (697)
.+.+|||||||+|.++..+++++ ..+|+.+|+++.+++.|++... .+.+..+|+...-- ++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 56899999999999999999885 3679999999999999987521 24566666554321 35
Q ss_pred CCccEEEeccccccccccH-----HHHHHHH----HHhccCCeEEEEEeCCC
Q 005417 346 LSFDMLHCARCGVDWDQKD-----GILLLEV----DRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 346 ~sFDlV~~~~~llh~~~d~-----~~~L~El----~RvLKPGG~Lvis~p~~ 388 (697)
++||+|++-.........+ ..+++.+ .++|+|||.+++..-..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 7899999874321211112 3566666 89999999999876433
No 255
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.29 E-value=7.5e-07 Score=90.23 Aligned_cols=133 Identities=14% Similarity=0.038 Sum_probs=91.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc--CcccccccccccCCCCCCccccccccC-ccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEG-LLSLE 622 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R--Glig~~~~~~e~f~typrtyDl~H~~~-~~~~~ 622 (697)
..|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ ++--+..|..+ ++. +.+||+|.|.. ++...
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFG-----TVEGLELSADMLAIARRRNPDAVLHHGDMRD-FSL-GRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-CCC-SCCEEEEEECTTGGGGS
T ss_pred CcEEEeCCcCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChHH-CCc-cCCcCEEEEcCchhhhc
Confidence 5799999999999999987422 45555554 555555554 22222233332 443 78999999987 77765
Q ss_pred cCCCCCCCcchhhhhhcccccCCcEEEEEcC-------------------------------------------------
Q 005417 623 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------------------------------------------- 653 (697)
Q Consensus 623 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------------------------------------------- 653 (697)
. +.-....+|-++-|+|+|||++++.+-
T Consensus 125 ~---~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (263)
T 3pfg_A 125 A---GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDR 201 (263)
T ss_dssp C---HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTT
T ss_pred C---CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCC
Confidence 3 333455789999999999999999520
Q ss_pred ------------HHHHHHHHHHHhhcCceeEEeeeccCCCccEEEEEcc
Q 005417 654 ------------ARLIESARALTTRLKWDARVIEIESNSDERLLICQKP 690 (697)
Q Consensus 654 ------------~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~li~~K~ 690 (697)
....++++++++.--+++...... .....++|++|+
T Consensus 202 ~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~-~~~~~~~va~K~ 249 (263)
T 3pfg_A 202 GITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG-PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTSSCEEEEEEC
T ss_pred cEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC-CCCceeEEEecC
Confidence 002688899999989987665322 235678999997
No 256
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.28 E-value=9.7e-07 Score=86.19 Aligned_cols=132 Identities=17% Similarity=0.203 Sum_probs=89.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCcccccccccccC---CCCC-CccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAF---PTYP-RTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGlig~~~~~~e~f---~typ-rtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.++.+|.+. .. +|+-+|-. ..+..+-+++-+.....-.+.+ +..+ .+||+|.|..++.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR--GI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT--TC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-
T ss_pred CEEEEeCCCCCHHHHHHHHC--CC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-
Confidence 68999999999999999873 22 44555544 6666777775433332111222 3233 4599999988887
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEcCH--------------------------------HHHHHHHHHHhhcCc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------------------------------RLIESARALTTRLKW 669 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~--------------------------------~~~~~~~~~~~~~~W 669 (697)
. .....+|-|+-|+|+|||++++.+.. ...++++++++.-.+
T Consensus 128 -~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 128 -H-----QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp -S-----SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTE
T ss_pred -h-----hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCC
Confidence 2 34568999999999999999996431 146888889999999
Q ss_pred eeEEeeeccC-----CCccEEEEEcc
Q 005417 670 DARVIEIESN-----SDERLLICQKP 690 (697)
Q Consensus 670 ~~~~~~~e~~-----~~~~~li~~K~ 690 (697)
++........ +..-++|++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 202 RLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred eEEEEecCCCCCCCCceeEEEEeecC
Confidence 8876543221 12456777774
No 257
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.24 E-value=5.8e-07 Score=86.30 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=75.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--cc-ccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig-~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~ 106 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY-----DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVV 106 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESC
T ss_pred CeEEEEcCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcch
Confidence 4899999999999999987422 44444443 33333322 233 11 2233332 343 789999999988
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcC--------------HHHHHHHHHHHhhcCceeEEee
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------------ARLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--------------~~~~~~~~~~~~~~~W~~~~~~ 675 (697)
+.... .-....+|-++-|+|+|||++++-+. .-..++++++.+. |++...+
T Consensus 107 l~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 107 LMFLE----AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GGGSC----GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhhCC----HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 87653 22456799999999999999877421 0134567777776 8877654
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.23 E-value=2e-06 Score=88.55 Aligned_cols=84 Identities=17% Similarity=0.121 Sum_probs=64.7
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC---CCcEEEeec
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFA 337 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg---l~~~~~~~d 337 (697)
....+.+.+.+....+ .+|||||||+|.++..|++++ ..++++|+++.|++.++++. .++.+..+|
T Consensus 15 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D 83 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKT--------DTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQND 83 (255)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcc
Confidence 3445566666654444 799999999999999999885 57999999999999998762 467788899
Q ss_pred ccCCCCCC----CCccEEEeccc
Q 005417 338 SKQLPYPS----LSFDMLHCARC 356 (697)
Q Consensus 338 a~~LPfpd----~sFDlV~~~~~ 356 (697)
+..+++++ +.|| |+++.-
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEEECC
T ss_pred hHhCCHHHhccCCCeE-EEecCC
Confidence 98888753 5688 666643
No 259
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.22 E-value=5.7e-06 Score=90.35 Aligned_cols=104 Identities=12% Similarity=0.062 Sum_probs=75.8
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHH
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLE 326 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~-------------------------------------~~sV~gvD~S~~ml~~A~e 326 (697)
...|||.+||+|.++..++..+.. ...|+++|+++.|++.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 478999999999998877754321 1459999999999998875
Q ss_pred c----CC--CcEEEeecccCCCCCCCCccEEEecccccccc---ccHHHHHHHHHHhccC--CeEEEEEeCCC
Q 005417 327 R----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSPLT 388 (697)
Q Consensus 327 r----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~---~d~~~~L~El~RvLKP--GG~Lvis~p~~ 388 (697)
+ |+ .+.+.+.|+..++.++ +||+|+++--..... .+...+..++.++||+ ||.+++.+...
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~~~~-~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQTED-EYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCCCCC-CSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHcCCCCceEEEECChHhCCCCC-CCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4 55 3678889999888764 899999994421111 2234566777777776 88888877644
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.21 E-value=4.6e-06 Score=90.80 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=77.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHH
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLE 326 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~-------------------------------------~~sV~gvD~S~~ml~~A~e 326 (697)
..+|||.+||+|.++..++..+.. ...|+|+|+++.+++.|++
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 478999999999999888765311 1469999999999998875
Q ss_pred c----CC--CcEEEeecccCCCCCCCCccEEEecccccccc---ccHHHHHHHHHHhccC--CeEEEEEeCCC
Q 005417 327 R----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSPLT 388 (697)
Q Consensus 327 r----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~---~d~~~~L~El~RvLKP--GG~Lvis~p~~ 388 (697)
+ ++ .+.+.+.|+..++.+ ++||+|+|+--..... .+...+.+++.++||+ ||.+++.+...
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 4 55 467888898888775 4899999986522222 2234577778888887 88888877644
No 261
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.19 E-value=2.4e-06 Score=88.78 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=68.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH---cCCCcEEEeecccCCCCCCCCccEEEecccccc-
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD- 359 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~e---rgl~~~~~~~da~~LPfpd~sFDlV~~~~~llh- 359 (697)
..+|||+|||+|.++..++++. ....+.++|++..+...... .+.++.....+++...++++.||+|+|..+ .+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a-pns 152 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG-ESS 152 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CCC
T ss_pred CCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCc-cCc
Confidence 3689999999999999887762 24567788877433100100 122334444444556677889999999864 33
Q ss_pred ---ccccHH--HHHHHHHHhccCC-eEEEEEeCCC
Q 005417 360 ---WDQKDG--ILLLEVDRVLKPG-GYFVWTSPLT 388 (697)
Q Consensus 360 ---~~~d~~--~~L~El~RvLKPG-G~Lvis~p~~ 388 (697)
+.+... .+|..+.++|+|| |.|++..+.+
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 333322 3578889999999 9999988754
No 262
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.19 E-value=6.8e-06 Score=86.97 Aligned_cols=105 Identities=8% Similarity=-0.060 Sum_probs=73.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCCCCC---CCccEEEec-
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPS---LSFDMLHCA- 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LPfpd---~sFDlV~~~- 354 (697)
+.+|||+|||+|..+..+++.-.....|+++|+++.+++.++++ ++ ++.+...|+..++... ++||.|++.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDP 182 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcC
Confidence 37999999999999999987521235799999999999887654 54 4667778877776432 579999972
Q ss_pred ---cc-ccccc-----------ccH-------HHHHHHHHHhccCCeEEEEEeCCCC
Q 005417 355 ---RC-GVDWD-----------QKD-------GILLLEVDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 355 ---~~-llh~~-----------~d~-------~~~L~El~RvLKPGG~Lvis~p~~~ 389 (697)
.. .+... .+. ..+|..+.++|+ ||+++.++-...
T Consensus 183 PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 183 SCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp CCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred CcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 11 11111 111 236777888887 999999876543
No 263
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.19 E-value=1.4e-06 Score=84.40 Aligned_cols=131 Identities=8% Similarity=0.020 Sum_probs=88.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC--cccccccccccCCCCCCccccccccCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG--lig~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++. +--+..|.. .++.-+.+||+|.+..++.+..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH-----QIEGLEPATRLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC-----CEEEECCCHHHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCC
T ss_pred CeEEEecCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCC
Confidence 4699999999999999987433 34444443 5555555552 211222332 2332248999999998887653
Q ss_pred CCCCCCCcchhhhhhcccccCCcEEEEEcCH----------------HHHHHHHHHHhhcCceeEEeeeccCCCccEEEE
Q 005417 624 GHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDARVIEIESNSDERLLIC 687 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~li~ 687 (697)
.-....+|-|+-|+|+|||++++.+.. ...++++++++...|++.............++-
T Consensus 117 ----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~ 192 (203)
T 3h2b_A 117 ----PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTA 192 (203)
T ss_dssp ----TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEE
T ss_pred ----HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhh
Confidence 235668999999999999999996421 236788899999999988776655533444433
No 264
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.16 E-value=1.1e-05 Score=87.75 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=76.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCc-------------------------------------eeEEEEecCCHHHHHHHHH
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELL-------------------------------------TMCIANYEASGSQVQLTLE 326 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~-------------------------------------~~sV~gvD~S~~ml~~A~e 326 (697)
...|||.+||+|.++..++..+.. ...++|+|+++.|++.|++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 478999999999998877754221 1459999999999998875
Q ss_pred c----CC--CcEEEeecccCCCCCCCCccEEEecccccccc---ccHHHHHHHHHHhccC--CeEEEEEeCCC
Q 005417 327 R----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSPLT 388 (697)
Q Consensus 327 r----gl--~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~---~d~~~~L~El~RvLKP--GG~Lvis~p~~ 388 (697)
. |+ .+.+.+.|+..++.++ +||+|+++--.-.-. .+...+..++.+.||+ ||.+++.++..
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred HHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 4 55 3678888999888764 899999984411112 2234677777788877 99988887744
No 265
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.16 E-value=1.4e-06 Score=90.68 Aligned_cols=137 Identities=17% Similarity=0.127 Sum_probs=89.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCccc----ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGlig----~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++.+|.....+- .+|+-+|-. ..+..+-+ .|+-. +..|..+ ++ ++.+||+|.+..
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPG--VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTT--CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCC--CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeEEEEECC
Confidence 469999999999999984211221 134444433 44443333 33321 2233333 33 358999999988
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH---------------------------------------HHHH
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------------------------------RLIE 658 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------------------------------------~~~~ 658 (697)
++.+.. +.-....+|-|+-|+|||||++++.+-. ...+
T Consensus 196 ~~~~~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 196 LNIYEP---DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp SGGGCC---CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhhcC---CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 887664 3333335799999999999999997611 1367
Q ss_pred HHHHHHhhcCceeEEeeeccCCCccEEEEEcc
Q 005417 659 SARALTTRLKWDARVIEIESNSDERLLICQKP 690 (697)
Q Consensus 659 ~~~~~~~~~~W~~~~~~~e~~~~~~~li~~K~ 690 (697)
+++++++.-.++...........-.+++++||
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 88888888889877665444445678899986
No 266
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.16 E-value=1.9e-06 Score=88.40 Aligned_cols=98 Identities=16% Similarity=0.185 Sum_probs=66.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----CcccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
..|||+|||.|+++.+|.+. .+. +|+-+|-. ..+..+-++ |+..-+.-.+..+..+|.+||+|.+..+|.+
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~-~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEK-YDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEH 141 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred CEEEEECCcccHHHHHHHHH-cCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhh
Confidence 47999999999999999842 233 44555543 555555544 4422222122222234589999999998887
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.. .-....+|-|+-|+|||||.+++.+
T Consensus 142 ~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 142 FG----HERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp TC----TTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC----hHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 63 1345678999999999999999864
No 267
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.14 E-value=5.6e-06 Score=89.96 Aligned_cols=106 Identities=15% Similarity=0.195 Sum_probs=71.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhc--------------CCceeEEEEecCCHHHHHHHHHc-----------------CCCc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSK--------------ELLTMCIANYEASGSQVQLTLER-----------------GLPA 331 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~--------------g~~~~sV~gvD~S~~ml~~A~er-----------------gl~~ 331 (697)
...+|+|+|||+|..|..++.. ..+..+|...|.........-+. +.+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3578999999999998887321 12356777778765543222110 0011
Q ss_pred EEEee---cccCCCCCCCCccEEEecccccccccc--------------------------------------HHHHHHH
Q 005417 332 MIGSF---ASKQLPYPSLSFDMLHCARCGVDWDQK--------------------------------------DGILLLE 370 (697)
Q Consensus 332 ~~~~~---da~~LPfpd~sFDlV~~~~~llh~~~d--------------------------------------~~~~L~E 370 (697)
.+..+ ....-.||+++||+|+++.+ +||..+ ...+|+.
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 22223489999999999998 999752 2346888
Q ss_pred HHHhccCCeEEEEEeCCCC
Q 005417 371 VDRVLKPGGYFVWTSPLTN 389 (697)
Q Consensus 371 l~RvLKPGG~Lvis~p~~~ 389 (697)
..+.|+|||.++++.....
T Consensus 211 ra~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HHHHEEEEEEEEEEEEECC
T ss_pred HHHHhCCCCEEEEEEecCC
Confidence 9999999999999987654
No 268
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.14 E-value=4.6e-06 Score=90.84 Aligned_cols=106 Identities=18% Similarity=0.175 Sum_probs=73.8
Q ss_pred CCEEEEeCCCCchHHHHHhhc----------------CCceeEEEEecCC-----------HHHHHHHHH-cC--CCcEE
Q 005417 284 VRTILDIGCGYGSFGAHLFSK----------------ELLTMCIANYEAS-----------GSQVQLTLE-RG--LPAMI 333 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~----------------g~~~~sV~gvD~S-----------~~ml~~A~e-rg--l~~~~ 333 (697)
.-+|+|+||++|..|..+... ..+..+|...|.. +.+.+.+.+ .+ .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999998887654 1245678888877 444443332 22 23455
Q ss_pred Eeeccc---CCCCCCCCccEEEeccccccccccHHH---------------------------------------HHHHH
Q 005417 334 GSFASK---QLPYPSLSFDMLHCARCGVDWDQKDGI---------------------------------------LLLEV 371 (697)
Q Consensus 334 ~~~da~---~LPfpd~sFDlV~~~~~llh~~~d~~~---------------------------------------~L~El 371 (697)
..+... .-.||+++||+|+++.+ +||..+... +|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333 34589999999999998 999744321 25566
Q ss_pred HHhccCCeEEEEEeCCCCh
Q 005417 372 DRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 372 ~RvLKPGG~Lvis~p~~~~ 390 (697)
.+.|+|||.++++......
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 212 SEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHEEEEEEEEEEEECCCT
T ss_pred HHHhccCCeEEEEEecCCC
Confidence 8999999999999876544
No 269
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.13 E-value=6.3e-06 Score=80.92 Aligned_cols=137 Identities=12% Similarity=0.089 Sum_probs=86.6
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc------------CcccccccccccCCCCCCcccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------------GFVGVLHDWCEAFPTYPRTYDL 612 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R------------Glig~~~~~~e~f~typrtyDl 612 (697)
-.+|||+|||.|.++.+|.+.. +. -+|+-+|-. ..+..+-++ .+-=+..|. +..+.-+.+||+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~ 105 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SF--EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDA 105 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TC--CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CC--CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCE
Confidence 3589999999999999998632 21 234444443 444444333 221122233 222222368999
Q ss_pred ccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCHH----------------------HHHHHH----HHHhh
Q 005417 613 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR----------------------LIESAR----ALTTR 666 (697)
Q Consensus 613 ~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~----------------------~~~~~~----~~~~~ 666 (697)
|-|..++.+... -.+..+|-|+-|+|+|||.+|...... ..++++ .+++.
T Consensus 106 V~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 181 (219)
T 3jwg_A 106 ATVIEVIEHLDE----NRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEK 181 (219)
T ss_dssp EEEESCGGGCCH----HHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHH
T ss_pred EEEHHHHHhCCH----HHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHH
Confidence 999998877641 224578999999999999888643221 123344 77888
Q ss_pred cCceeEEeeeccC-----CCccEEEEEcc
Q 005417 667 LKWDARVIEIESN-----SDERLLICQKP 690 (697)
Q Consensus 667 ~~W~~~~~~~e~~-----~~~~~li~~K~ 690 (697)
-.+++.....-+. ...++.||+|.
T Consensus 182 ~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 182 YGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp HTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred CCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 8888877744332 25789999986
No 270
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.11 E-value=2.9e-06 Score=83.89 Aligned_cols=116 Identities=12% Similarity=0.069 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHhhcccccCCCCCCCCCCCCCCCCCceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhH
Q 005417 509 ENWKTAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI 587 (697)
Q Consensus 509 ~~w~~~v~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i 587 (697)
..|...+..+.+.+...+. .-.+|||+|||.|.++..|.+.. + +|+-+|-. ..+..+
T Consensus 21 ~~~~~~~~~~~~~l~~~~~-----------------~~~~vLdiG~G~G~~~~~l~~~~-~----~v~~~D~s~~~~~~a 78 (239)
T 3bxo_A 21 KDYAAEASDIADLVRSRTP-----------------EASSLLDVACGTGTHLEHFTKEF-G----DTAGLELSEDMLTHA 78 (239)
T ss_dssp CCHHHHHHHHHHHHHHHCT-----------------TCCEEEEETCTTSHHHHHHHHHH-S----EEEEEESCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcC-----------------CCCeEEEecccCCHHHHHHHHhC-C----cEEEEeCCHHHHHHH
Confidence 4566666666666654321 13589999999999999998732 2 44445543 455555
Q ss_pred hccC--cccccccccccCCCCCCccccccccC-ccccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 588 LDRG--FVGVLHDWCEAFPTYPRTYDLVHAEG-LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 588 ~~RG--lig~~~~~~e~f~typrtyDl~H~~~-~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
-++. +--+..|..+ ++. +.+||+|.|.. .+.+.. +.-....+|-++-|+|+|||.+++.
T Consensus 79 ~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~~~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 79 RKRLPDATLHQGDMRD-FRL-GRKFSAVVSMFSSVGYLK---TTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp HHHCTTCEEEECCTTT-CCC-SSCEEEEEECTTGGGGCC---SHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCEEEECCHHH-ccc-CCCCcEEEEcCchHhhcC---CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 4442 2112223322 333 68999999644 665543 2234567899999999999999996
No 271
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.10 E-value=4.7e-06 Score=89.86 Aligned_cols=94 Identities=14% Similarity=0.157 Sum_probs=68.3
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CC-CcEEEeecccCCC--CCC------------
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPS------------ 345 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl-~~~~~~~da~~LP--fpd------------ 345 (697)
.+|||+|||+|.++..+++. ...|+++|.++.+++.|++. ++ ++.+..+|+..+. +.+
T Consensus 215 ~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 67999999999999999875 34799999999999888653 44 4667777765531 221
Q ss_pred --CCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 346 --LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 346 --~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
.+||+|++..-. ..+..++.+.|+++|.+++..-.+
T Consensus 292 ~~~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 292 KSYQCETIFVDPPR-------SGLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GGCCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEESCH
T ss_pred ccCCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEECCH
Confidence 379999865321 123456777788999988877644
No 272
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.09 E-value=1.3e-06 Score=90.07 Aligned_cols=93 Identities=17% Similarity=0.059 Sum_probs=62.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCcccccccccccCCCCCCccccccccCccccccCC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH 625 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGlig~~~~~~e~f~typrtyDl~H~~~~~~~~~~~ 625 (697)
.+|||+|||.|.++..|.+.... |+-+|-. ..+..+-++.=|-..+.=-|.++.=+.+||+|.|..+| +|.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~-----v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~-- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFER-----VHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF-- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSE-----EEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC--
T ss_pred CCEEEEcCCCCHHHHHHHHhCCE-----EEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hHh--
Confidence 37999999999999999874433 3444433 44444433322222222234444334899999999888 343
Q ss_pred CCCCCcchhhhhhcccccCCcEEEEE
Q 005417 626 RHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 626 ~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
..+..+-|+-|+|||||.+++-
T Consensus 113 ----~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 113 ----DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEE
Confidence 3457899999999999999873
No 273
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.09 E-value=4e-06 Score=78.87 Aligned_cols=127 Identities=14% Similarity=0.117 Sum_probs=83.8
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc--CcccccccccccCCCCCCccccccccCccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 622 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R--Glig~~~~~~e~f~typrtyDl~H~~~~~~~~ 622 (697)
-.+|||+|||.|.++.+|.+. . . +|+-+|-. ..+..+-++ .+--+..| .+++ +.+||+|.+..++...
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~--~-~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~--~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEF--A-T--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIP--DNSVDFILFANSFHDM 88 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTT--E-E--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSC--TTCEEEEEEESCSTTC
T ss_pred CCeEEEECCCCCHHHHHHHhh--c-C--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCC--CCceEEEEEccchhcc
Confidence 468999999999999999862 2 2 66666654 566666555 22222233 4444 3799999999888765
Q ss_pred cCCCCCCCcchhhhhhcccccCCcEEEEEcCH-------------HHHHHHHHHHhhcCceeEEeeeccCCCccEEEEEc
Q 005417 623 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------RLIESARALTTRLKWDARVIEIESNSDERLLICQK 689 (697)
Q Consensus 623 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~li~~K 689 (697)
. +...+|-|+-|+|+|||++++.+-. -..++++++.+ .|+..... +..+..-.+++.|
T Consensus 89 ~------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~-~~~~~~~~l~~~~ 159 (170)
T 3i9f_A 89 D------DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF-NPTPYHFGLVLKR 159 (170)
T ss_dssp S------CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE-CSSTTEEEEEEEE
T ss_pred c------CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc-CCCCceEEEEEec
Confidence 3 3457899999999999999996321 12456666666 66654432 2223455666665
Q ss_pred c
Q 005417 690 P 690 (697)
Q Consensus 690 ~ 690 (697)
+
T Consensus 160 ~ 160 (170)
T 3i9f_A 160 K 160 (170)
T ss_dssp C
T ss_pred C
Confidence 4
No 274
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.07 E-value=2.8e-06 Score=91.76 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=77.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhc---------------CCceeEEEEecCCHHHHHHHHHcCC------CcEEEeec---c
Q 005417 283 GVRTILDIGCGYGSFGAHLFSK---------------ELLTMCIANYEASGSQVQLTLERGL------PAMIGSFA---S 338 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~---------------g~~~~sV~gvD~S~~ml~~A~ergl------~~~~~~~d---a 338 (697)
..-+|+|+||++|..+..+... ..+..+|...|......+.+-+.-. +..+..+. .
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3467999999999988776654 3456788899988777765544311 22444333 2
Q ss_pred cCCCCCCCCccEEEeccccccccccH---------------------------------HHHHHHHHHhccCCeEEEEEe
Q 005417 339 KQLPYPSLSFDMLHCARCGVDWDQKD---------------------------------GILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 339 ~~LPfpd~sFDlV~~~~~llh~~~d~---------------------------------~~~L~El~RvLKPGG~Lvis~ 385 (697)
..-.||+++||+|+++.+ +||..+. ..+|+...+.|+|||.++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 335689999999999998 9997442 134888899999999999998
Q ss_pred CCCCh
Q 005417 386 PLTNP 390 (697)
Q Consensus 386 p~~~~ 390 (697)
.+...
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 76543
No 275
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.06 E-value=2.3e-06 Score=83.75 Aligned_cols=134 Identities=13% Similarity=0.034 Sum_probs=86.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc---ccccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl---ig~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++.+|.+...+-. .|+-+|-. ..+..+-++ |+ --+..|.. .++.-+.+||+|.+..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKG--KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN-KIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT-BCSSCSSCEEEEEEESC
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc-cCCCCCCCeeEEEeehh
Confidence 4799999999999999986320111 33334433 444444333 32 11222332 22322378999999988
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-------------HHHHHHHHHHhhcCceeEEeeeccCCCccEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------RLIESARALTTRLKWDARVIEIESNSDERLL 685 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~l 685 (697)
+.... ....+|-|+-|+|+|||++++.+-. ...++++.+++.-.|+..... +..+...++
T Consensus 116 l~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~-~~~~~~~~~ 188 (219)
T 3dh0_A 116 FHELS------EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV-EVGKYCFGV 188 (219)
T ss_dssp GGGCS------SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE-EETTTEEEE
T ss_pred hhhcC------CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE-eeCCceEEE
Confidence 87664 2457899999999999999997411 125788888888889866542 223456677
Q ss_pred EEEcc
Q 005417 686 ICQKP 690 (697)
Q Consensus 686 i~~K~ 690 (697)
+++|+
T Consensus 189 ~~~k~ 193 (219)
T 3dh0_A 189 YAMIV 193 (219)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88876
No 276
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.05 E-value=1.4e-05 Score=78.11 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=80.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhccCcccccccccccCCCCCCccccccccCccccccCCC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGHR 626 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~RGlig~~~~~~e~f~typrtyDl~H~~~~~~~~~~~~ 626 (697)
.+|||+|||.|.++..|. ..|..+-+.+. .+.+ . ..|.. .++.-+.+||+|.|..++. +.
T Consensus 69 ~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~----~~~~--~------~~d~~-~~~~~~~~fD~v~~~~~l~-~~--- 128 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR---NPVHCFDLASL----DPRV--T------VCDMA-QVPLEDESVDVAVFCLSLM-GT--- 128 (215)
T ss_dssp SCEEEETCTTCHHHHHCC---SCEEEEESSCS----STTE--E------ESCTT-SCSCCTTCEEEEEEESCCC-SS---
T ss_pred CeEEEECCcCCHHHHHhh---ccEEEEeCCCC----CceE--E------Eeccc-cCCCCCCCEeEEEEehhcc-cc---
Confidence 479999999999999884 34544444333 1111 1 11211 1232237899999988874 22
Q ss_pred CCCCcchhhhhhcccccCCcEEEEEcCHH---HHHHHHHHHhhcCceeEEeeeccCCCccEEEEEcc
Q 005417 627 HRCSTLDIFTEIDRILRPEGWVIIRDTAR---LIESARALTTRLKWDARVIEIESNSDERLLICQKP 690 (697)
Q Consensus 627 ~~c~~~~~l~E~dRiLRP~G~~i~~d~~~---~~~~~~~~~~~~~W~~~~~~~e~~~~~~~li~~K~ 690 (697)
....+|-|+-|+|+|||++++.+-.. ..+++.++++...++....+. .+..--+++++|.
T Consensus 129 ---~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 129 ---NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDL-TNSHFFLFDFQKT 191 (215)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEEC-CSTTCEEEEEEEC
T ss_pred ---CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEec-CCCeEEEEEEEec
Confidence 34678999999999999999986543 457788888888888766432 2223467778775
No 277
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.05 E-value=9.5e-06 Score=84.39 Aligned_cols=87 Identities=15% Similarity=0.109 Sum_probs=66.7
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC--CCcEEEeecc
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFAS 338 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg--l~~~~~~~da 338 (697)
....+.+.+.+... +. +|||||||+|.++..|++++ ..|+++|+++.|++.++++. .++.+..+|+
T Consensus 33 ~~i~~~Iv~~~~~~--------~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~ 100 (271)
T 3fut_A 33 EAHLRRIVEAARPF--------TG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA 100 (271)
T ss_dssp HHHHHHHHHHHCCC--------CS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCG
T ss_pred HHHHHHHHHhcCCC--------CC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECCh
Confidence 34455555555421 34 89999999999999999985 46999999999999998763 3577888899
Q ss_pred cCCCCCCC-CccEEEeccccccc
Q 005417 339 KQLPYPSL-SFDMLHCARCGVDW 360 (697)
Q Consensus 339 ~~LPfpd~-sFDlV~~~~~llh~ 360 (697)
..+++++. .||.|+++.- ++.
T Consensus 101 l~~~~~~~~~~~~iv~NlP-y~i 122 (271)
T 3fut_A 101 LLYPWEEVPQGSLLVANLP-YHI 122 (271)
T ss_dssp GGSCGGGSCTTEEEEEEEC-SSC
T ss_pred hhCChhhccCccEEEecCc-ccc
Confidence 88888653 6899998854 443
No 278
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.04 E-value=1.7e-06 Score=85.60 Aligned_cols=92 Identities=20% Similarity=0.311 Sum_probs=63.9
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc---CcccccccccccCCCCCCccccccccCcccccc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R---Glig~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ ++--+..|..+.+ .+.+||+|+|.+++.+..
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN-----DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS-----CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEEEESCGGGCS
T ss_pred cEEEECCCCCHHHHHHHHhCC-----cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--cCCcccEEEEhhHHHhhc
Confidence 599999999999999987432 33444433 444444444 3322223333333 358999999999988764
Q ss_pred CCCCCCCcchhhhhhc-ccccCCcEEEEEc
Q 005417 624 GHRHRCSTLDIFTEID-RILRPEGWVIIRD 652 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~d-RiLRP~G~~i~~d 652 (697)
+...+|-|+- |+|+|||++++.+
T Consensus 118 ------~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 ------DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ------SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 2357999999 9999999999964
No 279
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.04 E-value=5.4e-06 Score=86.54 Aligned_cols=77 Identities=13% Similarity=0.139 Sum_probs=59.1
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCc-eeEEEEecCCHHHHHHHHHc-CCCcEEEeecc
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLER-GLPAMIGSFAS 338 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~-~~sV~gvD~S~~ml~~A~er-gl~~~~~~~da 338 (697)
....+.+.+.+....+ .+|||||||+|.++..|++++.. ...++++|+++.|++.++++ ..++.+..+|+
T Consensus 28 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~ 99 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERG--------ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCG
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECCh
Confidence 3455566666654443 79999999999999999987432 13389999999999999876 34567888899
Q ss_pred cCCCCCC
Q 005417 339 KQLPYPS 345 (697)
Q Consensus 339 ~~LPfpd 345 (697)
..+++++
T Consensus 100 ~~~~~~~ 106 (279)
T 3uzu_A 100 LTFDFGS 106 (279)
T ss_dssp GGCCGGG
T ss_pred hcCChhH
Confidence 9888764
No 280
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.04 E-value=6.1e-06 Score=80.03 Aligned_cols=94 Identities=21% Similarity=0.234 Sum_probs=65.1
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Ccc---c-ccccccccCCCCCCccccccccCc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV---G-VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gli---g-~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
+|||+|||.|.++.+|.+. + -.+|+-+|-. ..+..+-++ |+- - +..|..+ ++.-+.+||+|.+..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--S--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN-IPIEDNYADLIVSRGS 120 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--S--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB-CSSCTTCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHc--C--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH-CCCCcccccEEEECch
Confidence 8999999999999999872 2 1345555543 555555444 432 1 2233322 3322389999999988
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+.+.. ....+|-|+-|+|+|||.+++.+
T Consensus 121 l~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 121 VFFWE------DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GGGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Hhhcc------CHHHHHHHHHHhCCCCCEEEEEe
Confidence 87653 34578999999999999999974
No 281
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.02 E-value=8.7e-05 Score=80.66 Aligned_cols=93 Identities=19% Similarity=0.202 Sum_probs=59.2
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEecccccccc-cc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-QK 363 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~-~d 363 (697)
.+||.++-+.|.++..+... ..++.+.-|....+..+..|...... ..+..+...||+|+.--- -+-. ..
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~d~v~~~~P-k~k~~~~ 117 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR----MAVERLETSRAAFRCLTASGLQARLA----LPWEAAAGAYDLVVLALP-AGRGTAY 117 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT----BEEEEEECBHHHHHHHHHTTCCCEEC----CGGGSCTTCEEEEEEECC-GGGCHHH
T ss_pred CcEEEecCCCCccccccCCC----CceEEEeCcHHHHHHHHHcCCCcccc----CCccCCcCCCCEEEEECC-cchhHHH
Confidence 68999999999877776532 23455555655555556667766331 112223468999974411 0000 11
Q ss_pred HHHHHHHHHHhccCCeEEEEEeC
Q 005417 364 DGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 364 ~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.+..|.++.+.|+|||.+++...
T Consensus 118 ~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 118 VQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEEEc
Confidence 35688999999999999998865
No 282
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.02 E-value=7.3e-06 Score=81.05 Aligned_cols=94 Identities=18% Similarity=0.187 Sum_probs=62.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-cc-ccccccccCCCCCCccccccccC-c
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEG-L 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-ig-~~~~~~e~f~typrtyDl~H~~~-~ 618 (697)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ |+ +- +..|.. .++ ++.+||+|.+.. +
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~~~-----~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPKFK-----NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLN-INRKFDLITCCLDS 111 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGGSS-----EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCC-CSCCEEEEEECTTG
T ss_pred CeEEEeCCCCCHHHHHHHHCCC-----cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCC-ccCCceEEEEcCcc
Confidence 4799999999999999987422 34444543 444444333 22 11 122222 233 347899999987 8
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 650 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 650 (697)
+.+.. +.-....+|-++-|+|+|||.+++
T Consensus 112 l~~~~---~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 112 TNYII---DSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGGCC---SHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccC---CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 87663 223456789999999999999998
No 283
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.01 E-value=1.8e-06 Score=86.24 Aligned_cols=116 Identities=16% Similarity=0.185 Sum_probs=78.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCcccccccccc---cCCCCCCccccccccCccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCE---AFPTYPRTYDLVHAEGLLSLE 622 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGlig~~~~~~e---~f~typrtyDl~H~~~~~~~~ 622 (697)
.+|||+|||.|.|+.+|.+.+. +|+-+|-. ..+..+-++ +--+..|..+ +|+. .+||+|.+..++.+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~~--~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI-----ESIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLPD--KYLDGVMISHFVEHL 114 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC-----CEEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSCT--TCBSEEEEESCGGGS
T ss_pred CeEEEEeCCCCHHHHHHHhCCC-----cEEEEECCHHHHHHHHhh-cceeeccHHHHhhhcCC--CCeeEEEECCchhhC
Confidence 5799999999999999987433 33444443 666666666 2112222222 4443 899999999888776
Q ss_pred cCCCCCCCcchhhhhhcccccCCcEEEEEcCH-------------------HHHHHHHHHHhhcCceeEEe
Q 005417 623 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------------RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 623 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------------~~~~~~~~~~~~~~W~~~~~ 674 (697)
. .-.+..+|-|+-|+|+|||++++.... -..++++.+++.-.++....
T Consensus 115 ~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 115 D----PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp C----GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred C----cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 4 124568999999999999999996321 11256667777766765443
No 284
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.00 E-value=2.5e-05 Score=79.95 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=72.6
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-CCCcEEEeeccc
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-GLPAMIGSFASK 339 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-gl~~~~~~~da~ 339 (697)
....+.+.+.+.... ..+|||||||+|.++..|++++ ...++++|+++.+++.++++ ..++.+..+|+.
T Consensus 17 ~~i~~~iv~~~~~~~--------~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 17 EGVLKKIAEELNIEE--------GNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDAS 86 (249)
T ss_dssp HHHHHHHHHHTTCCT--------TCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTT
T ss_pred HHHHHHHHHhcCCCC--------cCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchh
Confidence 345556666655443 3799999999999999999884 35799999999999999876 224678888999
Q ss_pred CCCCCCCC-ccEEEeccccccccccHHHHHHHHHHhc--cCCeEEEEE
Q 005417 340 QLPYPSLS-FDMLHCARCGVDWDQKDGILLLEVDRVL--KPGGYFVWT 384 (697)
Q Consensus 340 ~LPfpd~s-FDlV~~~~~llh~~~d~~~~L~El~RvL--KPGG~Lvis 384 (697)
.+++++.. ...|+++.- ++.. ..++..+.... -+.+.+++.
T Consensus 87 ~~~~~~~~~~~~vv~NlP-y~i~---~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 87 KFPFCSLGKELKVVGNLP-YNVA---SLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp TCCGGGSCSSEEEEEECC-TTTH---HHHHHHHHHTGGGCSEEEEEEE
T ss_pred hCChhHccCCcEEEEECc-hhcc---HHHHHHHHhcCCCCceEEEEEe
Confidence 88876522 225555533 3321 23444444332 334555553
No 285
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.99 E-value=1.2e-05 Score=87.53 Aligned_cols=96 Identities=16% Similarity=0.059 Sum_probs=71.5
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc-------------------CCC-cEEEeecccCCCC
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------------------GLP-AMIGSFASKQLPY 343 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er-------------------gl~-~~~~~~da~~LPf 343 (697)
..+|||+|||+|.++..++++. ....|+++|+++.+++.+++. ++. +.+...|+..+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 4789999999999999999872 234699999999999887642 444 5566666654421
Q ss_pred -CCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEe
Q 005417 344 -PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 344 -pd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
..+.||+|++.-- .....++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lDP~-----~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPF-----GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCS-----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCC-----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1357999995421 123578999999999999988875
No 286
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.99 E-value=6.7e-06 Score=93.38 Aligned_cols=104 Identities=12% Similarity=0.001 Sum_probs=74.4
Q ss_pred CCEEEEeCCCCchHHHHHhhcC---C--------------ceeEEEEecCCHHHHHHHHHc----CCC------cEEEee
Q 005417 284 VRTILDIGCGYGSFGAHLFSKE---L--------------LTMCIANYEASGSQVQLTLER----GLP------AMIGSF 336 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g---~--------------~~~sV~gvD~S~~ml~~A~er----gl~------~~~~~~ 336 (697)
..+|||.+||+|.++..+++.- . ....++|+|+++.+++.|+.. ++. ..+.++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 4789999999999988776531 0 124699999999999988753 444 456666
Q ss_pred cccCCC-CCCCCccEEEecccccccc------------cc-HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 337 ASKQLP-YPSLSFDMLHCARCGVDWD------------QK-DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 337 da~~LP-fpd~sFDlV~~~~~llh~~------------~d-~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
|+...+ .+.+.||+|+++--+.... .+ ...++..+.+.|||||++++..|.
T Consensus 250 DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp CTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 654433 3457899999985422111 11 236899999999999999998773
No 287
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.99 E-value=2.5e-05 Score=90.12 Aligned_cols=120 Identities=17% Similarity=0.137 Sum_probs=77.2
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchH---HHHHhhcCCceeEEEEecCCHHHHHHHHH----cCC--Cc
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSF---GAHLFSKELLTMCIANYEASGSQVQLTLE----RGL--PA 331 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~---a~~La~~g~~~~sV~gvD~S~~ml~~A~e----rgl--~~ 331 (697)
..|.+.+.+.+.......-.......|||||||+|.+ +...++++...+.|+++|-++. ...|++ .+. .+
T Consensus 335 ~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkV 413 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQV 413 (637)
T ss_dssp HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGE
T ss_pred HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeE
Confidence 4555566655543211111112345799999999988 5555555545668999999974 434432 233 46
Q ss_pred EEEeecccCCCCCCCCccEEEecccccccc-ccHHHHHHHHHHhccCCeEEE
Q 005417 332 MIGSFASKQLPYPSLSFDMLHCARCGVDWD-QKDGILLLEVDRVLKPGGYFV 382 (697)
Q Consensus 332 ~~~~~da~~LPfpd~sFDlV~~~~~llh~~-~d~~~~L~El~RvLKPGG~Lv 382 (697)
++..++++++..| +.+|+|++.-...-.. +.....|....|.|||||.++
T Consensus 414 tVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 414 TVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 7788899988877 4899999974322111 222357888899999999876
No 288
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.98 E-value=4.6e-06 Score=86.45 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=66.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Ccc----cccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV----GVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gli----g~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|+++..|.+. .+ .+|+-+|-. ..+..+-++ |+- -+..|+.+ + +.+||+|.+..
T Consensus 74 ~~vLDiGcG~G~~~~~la~~-~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---~~~fD~v~~~~ 145 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAE-YD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-F---DEPVDRIVSLG 145 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-C---CCCCSEEEEES
T ss_pred CEEEEeeccCcHHHHHHHHh-CC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH-c---CCCccEEEEcc
Confidence 47999999999999999873 13 234444543 555555443 542 22334432 3 78999999999
Q ss_pred ccccccCCC---CCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHR---HRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~---~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+|.+..... ..-....+|-|+-|+|+|||.+++.+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 988774100 11334579999999999999999863
No 289
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.98 E-value=5.1e-06 Score=82.62 Aligned_cols=119 Identities=13% Similarity=-0.001 Sum_probs=79.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cccc----ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig----~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++.+|.+.. .+|+-+|-. ..+..+-++ |... +..|..+.. .+.+||+|.+..
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~-----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~ 140 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE-----RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--PTELFDLIFDYV 140 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT-----EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--CSSCEEEEEEES
T ss_pred CCEEEeCCCCCHHHHHHHhCC-----CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--CCCCeeEEEECh
Confidence 389999999999999998632 234444543 444444333 3222 223333322 236899999988
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-----------HHHHHHHHHHhhcCceeEEeee
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------RLIESARALTTRLKWDARVIEI 676 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------~~~~~~~~~~~~~~W~~~~~~~ 676 (697)
+|.... .-....+|-++-|+|+|||++++.+-. -..++++++.+.-.|+....+.
T Consensus 141 ~l~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 141 FFCAIE----PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp STTTSC----GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred hhhcCC----HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 887653 234567899999999999999985321 1357888888888898766543
No 290
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.98 E-value=1.8e-05 Score=76.98 Aligned_cols=115 Identities=16% Similarity=0.173 Sum_probs=75.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----CcccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.++.+|.+ .+. .+|+-+|-. ..+..+-++ |+-.+----+..++..+.+||+|.++..+..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~--~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHK--LGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHH--TTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH
T ss_pred CEEEEECCCCCHHHHHHHH--CCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH
Confidence 4799999999999999886 322 134444443 444444433 4422111111222233589999999776654
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEc-CHHHHHHHHHHHhhcCceeEEe
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 674 (697)
. ..++-++-|+|+|||++++.+ .....+.+..+.....++....
T Consensus 138 ~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 138 L---------LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp H---------HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred H---------HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 3 368999999999999999974 3345667777777777776554
No 291
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.98 E-value=1.5e-05 Score=78.70 Aligned_cols=139 Identities=13% Similarity=0.069 Sum_probs=87.2
Q ss_pred eEEEecccC-chhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc-ccc-cccccccCCCCC-CccccccccC
Q 005417 547 RNVLDMNAH-FGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VGV-LHDWCEAFPTYP-RTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g-~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl-ig~-~~~~~e~f~typ-rtyDl~H~~~ 617 (697)
.+|||+||| .|.++.+|... . .-+|+-+|-. ..+..+-+ .|+ +-+ ..|+. .+..+| .+||+|-++-
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~--~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKF--F--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG-IIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHH--H--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC-SSTTTCCSCEEEEEECC
T ss_pred CEEEEcCCCHHHHHHHHHHHh--c--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch-hhhhcccCceeEEEECC
Confidence 579999999 99999988863 1 1234444443 33433332 343 222 22321 233333 7999999976
Q ss_pred ccccccC------------C-CCCCCcchhhhhhcccccCCcEEEE--EcCHHHHHHHHHHHhhcCceeEEeeeccCC-C
Q 005417 618 LLSLESG------------H-RHRCSTLDIFTEIDRILRPEGWVII--RDTARLIESARALTTRLKWDARVIEIESNS-D 681 (697)
Q Consensus 618 ~~~~~~~------------~-~~~c~~~~~l~E~dRiLRP~G~~i~--~d~~~~~~~~~~~~~~~~W~~~~~~~e~~~-~ 681 (697)
.|..... . .....+..++-++-|+|+|||++++ ....+..+++.++++...|++.......+. -
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~~~ 211 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGTRW 211 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC-C
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCCeE
Confidence 5543210 0 0011135788999999999999998 345577888889999999988877655554 3
Q ss_pred ccEEEEEcc
Q 005417 682 ERLLICQKP 690 (697)
Q Consensus 682 ~~~li~~K~ 690 (697)
-.+++++|.
T Consensus 212 ~~~l~f~~~ 220 (230)
T 3evz_A 212 RHSLIFFKG 220 (230)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 567777764
No 292
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.95 E-value=2.7e-06 Score=85.24 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=65.1
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--cc-ccccccccCCCCCCccccccccC
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig-~~~~~~e~f~typrtyDl~H~~~ 617 (697)
-.+|||+|||.|.++.+|.+... +|+-+|-. ..+..+-+ .|+ +- +..|. +.++.-+.+||+|.|..
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRY 95 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEES
T ss_pred CCEEEEEccCcCHHHHHHHHhCC-----EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECC
Confidence 35799999999999999987422 45555543 44444333 243 22 22233 33443348999999998
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
++.++. +...+|-|+-|+|||||++++.+
T Consensus 96 ~l~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 96 AAHHFS------DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp CGGGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcc------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 887664 34688999999999999999964
No 293
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.95 E-value=2.3e-06 Score=85.55 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=80.9
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC----ccc-ccccccccCCCCCCccccccccCcc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVG-VLHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG----lig-~~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
-.+|||+|||.|.++.+|++.. .-+|+-+|-. ..+..+-++- -+- +..|..+ ++.-+.+||+|.|..++
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 168 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKL----YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMET-ATLPPNTYDLIVIQWTA 168 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHH----CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG-CCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHhh----cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH-CCCCCCCeEEEEEcchh
Confidence 4689999999999999998631 1134444433 4455554442 121 2233332 33323799999999988
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH----------------HHHHHHHHHHhhcCceeEEeee
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDARVIEI 676 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~~~ 676 (697)
.+.. . -....+|-|+-|+|||||++++.+.. ...++++++++.-.++......
T Consensus 169 ~~~~---~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 169 IYLT---D-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp GGSC---H-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred hhCC---H-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 7763 1 23557899999999999999997631 1246778888888888765543
No 294
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.94 E-value=2.9e-05 Score=84.83 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=72.7
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----CCC---cEEEeecccCC-C-CCCCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQL-P-YPSLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----gl~---~~~~~~da~~L-P-fpd~sFDlV~~~ 354 (697)
+.+|||++||+|.++..++.+......|+++|+++.+++.+++. ++. +.+..+|+..+ . ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 47899999999999999998521235799999999999887653 553 56666675443 1 124579999987
Q ss_pred cccccccccHHHHHHHHHHhccCCeEEEEEe
Q 005417 355 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 355 ~~llh~~~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
- + .....++..+.+.|+|||+++++.
T Consensus 133 P--~---g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 P--F---GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp C--S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred C--C---cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 1 123468999999999999988876
No 295
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.94 E-value=9.4e-06 Score=78.43 Aligned_cols=142 Identities=11% Similarity=-0.008 Sum_probs=78.6
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cC--cccccccccccCCC---CCCccccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RG--FVGVLHDWCEAFPT---YPRTYDLVHA 615 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RG--lig~~~~~~e~f~t---yprtyDl~H~ 615 (697)
=.+|||+|||.|.++.+|.+.... .+|+-+|-. ..+..+-+ .| +-=+..|..++++. .+.+||+|-+
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPG---VSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTT---EEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCEEEEecCCHhHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 358999999999999999874212 133333332 22222222 12 22233455554442 2378999999
Q ss_pred cCccccccCC----------CCCCC----------cchhhhhhcccccCCcE-EEEEcCHHHHHHHHHHHh--hcCceeE
Q 005417 616 EGLLSLESGH----------RHRCS----------TLDIFTEIDRILRPEGW-VIIRDTARLIESARALTT--RLKWDAR 672 (697)
Q Consensus 616 ~~~~~~~~~~----------~~~c~----------~~~~l~E~dRiLRP~G~-~i~~d~~~~~~~~~~~~~--~~~W~~~ 672 (697)
+--|...... ..... +..++-++-|+|+|||+ +++.-.....+++.++.. .-.|...
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEEC
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceE
Confidence 6554321100 00011 15788999999999999 777544455666777777 5556543
Q ss_pred EeeeccCCCccEEEEEcc
Q 005417 673 VIEIESNSDERLLICQKP 690 (697)
Q Consensus 673 ~~~~e~~~~~~~li~~K~ 690 (697)
....+..+.+++++++|.
T Consensus 188 ~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 188 RKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp CEEECTTSCEEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEEc
Confidence 332333445788888764
No 296
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.93 E-value=3.2e-06 Score=84.75 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=63.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcc---c-ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGli---g-~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++.+|.+. ... +|+-+|-. ..+..+-+ .|+- - +..|+.+ ++. +.+||+|.|..
T Consensus 38 ~~VLDiGcG~G~~~~~la~~-~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARD-HGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-YVA-NEKCDVAACVG 111 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHH-TCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-CCC-SSCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHh-cCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh-CCc-CCCCCEEEECC
Confidence 47999999999999999863 121 33444433 44443332 3542 1 2233332 333 68999999987
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
++.+.. +...+|-|+-|+|||||++++.+
T Consensus 112 ~~~~~~------~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 112 ATWIAG------GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CGGGTS------SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ChHhcC------CHHHHHHHHHHHcCCCeEEEEec
Confidence 776543 35678999999999999999964
No 297
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.93 E-value=2e-05 Score=77.04 Aligned_cols=132 Identities=15% Similarity=0.191 Sum_probs=83.5
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc---CcccccccccccCCCCCCccccccccCcccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R---Glig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
-.+|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-++ .+--+..|..+ ++ ++.+||+|.|..++..
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR-----TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FE-VPTSIDTIVSTYAFHH 118 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC-----EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CC-CCSCCSEEEEESCGGG
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC-----eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cC-CCCCeEEEEECcchhc
Confidence 35899999999999999987322 44444543 445444444 22222223322 22 2389999999988876
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEcC----HH---------------------------HHHHHHHHHhhcCce
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----AR---------------------------LIESARALTTRLKWD 670 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----~~---------------------------~~~~~~~~~~~~~W~ 670 (697)
... . ....+|-|+-|+|+|||++++.+. .. ..++++++++.-.++
T Consensus 119 ~~~---~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 119 LTD---D-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp SCH---H-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEE
T ss_pred CCh---H-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCE
Confidence 641 1 112389999999999999999742 11 136777888888887
Q ss_pred eEEeeeccCCCccEEEEEcc
Q 005417 671 ARVIEIESNSDERLLICQKP 690 (697)
Q Consensus 671 ~~~~~~e~~~~~~~li~~K~ 690 (697)
+..... .+-.=++.++|+
T Consensus 195 v~~~~~--~~~~w~~~~~~~ 212 (220)
T 3hnr_A 195 VTFTRL--NHFVWVMEATKQ 212 (220)
T ss_dssp EEEEEC--SSSEEEEEEEEC
T ss_pred EEEeec--cceEEEEeehhh
Confidence 665542 222335555554
No 298
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.93 E-value=4.7e-06 Score=90.53 Aligned_cols=153 Identities=8% Similarity=0.072 Sum_probs=105.3
Q ss_pred cccCccccccchhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCCCCCceeEEEecccCchhhhhhhhccCCCeEEEEee
Q 005417 497 YGVHPEEFAEDTENWKTAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVV 576 (697)
Q Consensus 497 ~~~~~~~f~~d~~~w~~~v~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~ 576 (697)
+......|...+..|......+.+.+-..+. + ..=.+|||+|||.|.++.+|.+. .. +|+
T Consensus 74 y~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~-------------~--~~~~~VLDiGcG~G~~~~~l~~~--g~---~v~ 133 (416)
T 4e2x_A 74 FHEVYPYHSSGSSVMREHFAMLARDFLATEL-------------T--GPDPFIVEIGCNDGIMLRTIQEA--GV---RHL 133 (416)
T ss_dssp SSTTCCCCGGGCHHHHHHHHHHHHHHHHTTT-------------C--SSSCEEEEETCTTTTTHHHHHHT--TC---EEE
T ss_pred ccCCccCcCcCCHHHHHHHHHHHHHHHHHhC-------------C--CCCCEEEEecCCCCHHHHHHHHc--CC---cEE
Confidence 3334556667778898888888776544331 1 12348999999999999999873 32 556
Q ss_pred cCCCC-CchhhHhccCcccccccc----cccCCCCCCccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 577 PTIGT-NHLPMILDRGFVGVLHDW----CEAFPTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 577 p~~~~-~~l~~i~~RGlig~~~~~----~e~f~typrtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
=+|-. +.+..+-++|+-.....+ .+.++.-+.+||+|.+.++|.+.. +...+|-|+-|+|+|||++++.
T Consensus 134 gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~------d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 134 GFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIP------YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp EECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCT------THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcC------CHHHHHHHHHHHcCCCeEEEEE
Confidence 66655 777888888763322111 111221137899999999988774 3568999999999999999997
Q ss_pred cCH--------------------HHHHHHHHHHhhcCceeEEee
Q 005417 652 DTA--------------------RLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 652 d~~--------------------~~~~~~~~~~~~~~W~~~~~~ 675 (697)
... ...++++.+++.-.++.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 208 DPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp EECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEE
T ss_pred eCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEE
Confidence 421 113578888888888766554
No 299
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.92 E-value=2.5e-06 Score=83.51 Aligned_cols=98 Identities=15% Similarity=0.205 Sum_probs=67.9
Q ss_pred ceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC----cccc-cccccccCCCCCCccccccccCc
Q 005417 545 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGV-LHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 545 ~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG----lig~-~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.-.+|||+|||.|.++.+|.+.. -+|+-+|-. ..+..+-++. -+-+ ..|. +.++ .+.+||+|.|..+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC-----KRLTVIDVMPRAIGRACQRTKRWSHISWAATDI-LQFS-TAELFDLIVVAEV 123 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE-----EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT-TTCC-CSCCEEEEEEESC
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC-----CEEEEEECCHHHHHHHHHhcccCCCeEEEEcch-hhCC-CCCCccEEEEccH
Confidence 45789999999999999998731 356666654 4555554442 1222 2232 2233 2589999999988
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+.+.. +.-.+..+|-|+-|+|+|||++++.+
T Consensus 124 l~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 124 LYYLE---DMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp GGGSS---SHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhCC---CHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 88765 33344567999999999999999964
No 300
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.91 E-value=1.1e-05 Score=76.01 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=77.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Ccc---cccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV---GVLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gli---g~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++..|.+. .+- ..|+-+|-. ..+..+-++ |+- -+..|..+.++..+.+||+|.+...
T Consensus 27 ~~vldiG~G~G~~~~~l~~~-~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRS-TPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGG 103 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTT-SSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CeEEEeCCCCCHHHHHHHHH-CCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCc
Confidence 58999999999999998863 221 234444443 444444432 432 2334555666665578999998776
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhcCceeEEe
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~ 674 (697)
+.. ..++-++-|+|+|||.+++.+. .+....+..+.+...+++...
T Consensus 104 ~~~----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 104 LTA----------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp TTC----------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEEE
T ss_pred ccH----------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEEE
Confidence 654 3589999999999999999764 455666667777766665443
No 301
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.91 E-value=9.2e-06 Score=84.71 Aligned_cols=98 Identities=13% Similarity=0.132 Sum_probs=65.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----CcccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.++..|.+. ... +|+-+|-. ..+..+-++ |+-..+.-.+..+..+|.+||+|.+..+|.+
T Consensus 92 ~~vLDiGcG~G~~~~~la~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVER-FDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred CEEEEEcccchHHHHHHHHH-CCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 37999999999999999863 122 44444543 555555444 5422122122222334589999999988876
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.. .-....+|-|+-|+|+|||.+++.+
T Consensus 168 ~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 168 FG----HENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp TC----GGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC----HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 53 1245678999999999999999863
No 302
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.90 E-value=3.9e-06 Score=84.76 Aligned_cols=95 Identities=21% Similarity=0.175 Sum_probs=64.6
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcc---cccccccccCCCCCCccccccccC
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---GVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGli---g~~~~~~e~f~typrtyDl~H~~~ 617 (697)
-.+|||+|||.|.++..|.+... .|+-+|-. ..+..+-+ +|+- -+..|..+ ++.-+.+||+|.+..
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPFVK-----KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ-MPFTDERFHIVTCRI 111 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C-CCSCTTCEEEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhCC-----EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh-CCCCCCCEEEEEEhh
Confidence 45899999999999999987322 45555543 44544433 3431 12233322 332238999999998
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
++.++. +...+|-|+-|+|||||++++.+
T Consensus 112 ~l~~~~------d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHFP------NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhcC------CHHHHHHHHHHHcCCCCEEEEEE
Confidence 887664 34579999999999999999963
No 303
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.90 E-value=3.1e-06 Score=87.21 Aligned_cols=95 Identities=22% Similarity=0.352 Sum_probs=65.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc---cc-ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl---ig-~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++..|.+. .+. +|+-+|-. ..+..+-+ .|+ +- +..|.. .+|.-+.+||+|.+..
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRK-FGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEES
T ss_pred CEEEEeCCCCCHHHHHHHHH-hCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecc
Confidence 48999999999999999863 122 45555543 45544433 343 11 222332 2332237999999999
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
++.+.. + ...+|-|+-|+|||||++++.+
T Consensus 159 ~l~~~~---~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 159 AFLHSP---D---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CGGGCS---C---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcC---C---HHHHHHHHHHHcCCCeEEEEEE
Confidence 888775 3 5689999999999999999974
No 304
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.90 E-value=3.6e-05 Score=80.92 Aligned_cols=114 Identities=17% Similarity=0.185 Sum_probs=76.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc--Cccc----cccccc-ccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVG----VLHDWC-EAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R--Glig----~~~~~~-e~f~typrtyDl~H~~~~ 618 (697)
++|||+|||+|+|+..|++.+. -.|+-+|-. ++|...+.+ .++. -+.... +.++. .+||++-|+..
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga----~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~d~s 160 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA----KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE--GLPSFASIDVS 160 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC----SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT--CCCSEEEECCS
T ss_pred cEEEecCCCccHHHHHHHhCCC----CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC--CCCCEEEEEee
Confidence 5899999999999999987321 134444543 667654431 1110 111111 22332 45999999887
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcC----------------------HHHHHHHHHHHhhcCceeEEee
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----------------------ARLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----------------------~~~~~~~~~~~~~~~W~~~~~~ 675 (697)
|... ..+|-|+-|+|+|||.+++--+ ...++++.+++....|.+....
T Consensus 161 f~sl---------~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 161 FISL---------NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp SSCG---------GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred HhhH---------HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 7644 3799999999999999987411 1367888899999999877654
No 305
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.87 E-value=1.2e-05 Score=76.18 Aligned_cols=113 Identities=18% Similarity=0.146 Sum_probs=75.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc----ccccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF----VGVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl----ig~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++..|.+.. -+|+-+|.. ..+..+-+ .|+ --+..|+.+.++.. .+||+|-++.
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~-----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~ 108 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRV-----RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGG 108 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTS-----SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHhc-----CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECC
Confidence 489999999999999998632 244444443 33433333 232 11233444444432 3799999876
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhcCceeEEe
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~ 674 (697)
.+... ..++-++-|+|+|||.+++.+. .....++.++.+...|++...
T Consensus 109 ~~~~~---------~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 109 SGGEL---------QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp CTTCH---------HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred chHHH---------HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 65433 4789999999999999999753 566777888887777765544
No 306
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.87 E-value=6.3e-06 Score=84.54 Aligned_cols=116 Identities=15% Similarity=0.184 Sum_probs=74.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc-cc-ccccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VG-VLHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl-ig-~~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
..|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.|..+|
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGY-----DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVF 194 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSG
T ss_pred CcEEEECCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccch
Confidence 4799999999999999987432 44555543 33433332 343 11 1223322 232 6899999999988
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEEcC--------------HHHHHHHHHHHhhcCceeEEee
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------------ARLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--------------~~~~~~~~~~~~~~~W~~~~~~ 675 (697)
.+.. .-.+..+|-++-|+|+|||++++-.. .-.-++++++... |++...+
T Consensus 195 ~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 195 MFLN----RERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp GGSC----GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhCC----HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 7653 23455799999999999999777311 0113456666665 8876654
No 307
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.87 E-value=4.9e-06 Score=84.68 Aligned_cols=96 Identities=15% Similarity=0.250 Sum_probs=63.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc--ccc-cccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VGV-LHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl--ig~-~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++..|.+..... .|+-+|-. ..+..+-++ |+ +-+ ..|.. .++.-+.+||+|++..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEESC
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEech
Confidence 589999999999999998741122 33333433 444444332 43 111 22332 23333489999999998
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+.... ....+|-++-|+|||||++++.+
T Consensus 115 l~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 LEHLQ------SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGGCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcC------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 87664 23478999999999999999964
No 308
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.86 E-value=1.6e-05 Score=75.43 Aligned_cols=134 Identities=15% Similarity=0.108 Sum_probs=82.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC--cccccccccccCCCCCCcccccccc-Cccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAE-GLLSLE 622 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG--lig~~~~~~e~f~typrtyDl~H~~-~~~~~~ 622 (697)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|.+. .++...
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH-----DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CeEEEECCCCCHHHHHHHHCCC-----cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 4799999999999999987422 34444443 3343333331 2112223332 22213789999997 555543
Q ss_pred cCCCCCCCcchhhhhhcccccCCcEEEEEcCH---HHHHHHHHHHhhcCceeEEeeecc-------CCCccEEEEEcc
Q 005417 623 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---RLIESARALTTRLKWDARVIEIES-------NSDERLLICQKP 690 (697)
Q Consensus 623 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---~~~~~~~~~~~~~~W~~~~~~~e~-------~~~~~~li~~K~ 690 (697)
. .-....+|-++-|+|+|||.+++.... ...+++.++++...+++......- ...--++|++|+
T Consensus 122 ~----~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 122 A----EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp C----HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred C----hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 2 122357899999999999999996432 246777788888888776553221 112336777764
No 309
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.86 E-value=3.9e-05 Score=73.14 Aligned_cols=130 Identities=16% Similarity=0.129 Sum_probs=85.9
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCcccccccccccCCCCCCccccccccCccccccCC-
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH- 625 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGlig~~~~~~e~f~typrtyDl~H~~~~~~~~~~~- 625 (697)
.|||+|||.|.++.+|.+. - +|+-+|-. ..+.. ...+--+..|..++++. .+||+|-++..|......
T Consensus 26 ~vLD~GcG~G~~~~~l~~~--~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~~--~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKR--N----TVVSTDLNIRALES--HRGGNLVRADLLCSINQ--ESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp EEEEETCTTCHHHHHHTTT--S----EEEEEESCHHHHHT--CSSSCEEECSTTTTBCG--GGCSEEEECCCCBTTCCCT
T ss_pred eEEEeccCccHHHHHHHhc--C----cEEEEECCHHHHhc--ccCCeEEECChhhhccc--CCCCEEEECCCCccCCccc
Confidence 7999999999999999863 2 55555554 33333 33333344555555543 899999998777643210
Q ss_pred --CCCCCcchhhhhhcccccCCcEEEEEc-CHHHHHHHHHHHhhcCceeEEeeeccCCCccEEEEE
Q 005417 626 --RHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIEIESNSDERLLICQ 688 (697)
Q Consensus 626 --~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~li~~ 688 (697)
........++-++=|.| |||.+++.. .....+++.++++...|+.........+-+++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 01122335666777777 999999965 335577888888888999877765555566666554
No 310
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.86 E-value=3.4e-06 Score=82.91 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=64.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc-------ccccccccccCCCCCCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-------VGVLHDWCEAFPTYPRTYDLVH 614 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl-------ig~~~~~~e~f~typrtyDl~H 614 (697)
.+|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-+ .|+ +-+...=.+.++.-+.+||+|.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY-----SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 4799999999999999987432 44444443 44444433 333 1111111222332247999999
Q ss_pred ccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+..++.... +.-....+|-++-|+|||||.+++.+
T Consensus 107 ~~~~l~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAFLTSVP---DPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESCGGGCC---CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhcCC---CHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 998887765 32333378999999999999999964
No 311
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.85 E-value=4.8e-06 Score=80.70 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=78.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-----CcccccccccccCCCCCCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-----Glig~~~~~~e~f~typrtyDl~H~~~~~~ 620 (697)
.+|||+|||.|.++..|.+.... +|+-+|-. ..+..+-++ .+--+..|..+ ++.-+.+||+|-+..++.
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~----~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP----NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC----CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CCSCSSCEEEEEEESHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC----cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CCCCCCcccEEEECcchh
Confidence 47999999999999999874321 33333332 333333332 12122233332 222137899999988876
Q ss_pred cccCCC---------CCCCcchhhhhhcccccCCcEEEEEcCHHHHHHHHHHH--hhcCceeEEeeeccCCCccEEEEEc
Q 005417 621 LESGHR---------HRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALT--TRLKWDARVIEIESNSDERLLICQK 689 (697)
Q Consensus 621 ~~~~~~---------~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~--~~~~W~~~~~~~e~~~~~~~li~~K 689 (697)
...... +......+|-|+-|+|+|||.+++.+-...- ..+.+. ....|+......+++..-.+.+++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHATYGSGFHFHLYLMHK 197 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEEEESGGGCEEEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEEEecCcceEEEEEEEe
Confidence 543000 0123468999999999999999998653211 112222 3346876665443333334555554
No 312
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.84 E-value=1.4e-05 Score=80.13 Aligned_cols=94 Identities=21% Similarity=0.191 Sum_probs=64.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC----cccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG----lig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.++.+|.+.... +|+-+|-. ..+..+-++. +--+..|. +.++.-+.+||+|.|..++..
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAK----KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEchhhhh
Confidence 58999999999999999874321 44444543 4555554442 21122232 234432489999999998876
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
.. ....+|-|+-|+|+|||.+++.
T Consensus 121 ~~------~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 121 IA------SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CS------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hh------hHHHHHHHHHHHcCCCcEEEEE
Confidence 63 3567999999999999999996
No 313
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.84 E-value=6.4e-06 Score=84.87 Aligned_cols=99 Identities=10% Similarity=0.104 Sum_probs=63.3
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-cc-ccccccccCCCCCCccccccccCc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-ig-~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
-.+|||+|||.|.++..|.+. .+- .-.|+-+|-. ..+..+-++ |+ +- +..|.. .++ ++.+||+||+..+
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~-~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPL-LPE-GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICHAF 98 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTT-SCT-TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEESC
T ss_pred CCeEEEecCCCCHHHHHHHHh-CCC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEECCh
Confidence 358999999999999999863 110 0122333322 333333222 21 11 223333 233 3689999999998
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 654 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 654 (697)
+.... +...+|-|+-|+|+|||++++.+..
T Consensus 99 l~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMT------TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCS------SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCC------CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 87654 3358999999999999999987543
No 314
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.84 E-value=7.8e-06 Score=79.41 Aligned_cols=127 Identities=9% Similarity=0.067 Sum_probs=76.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--ccc-cccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGV-LHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig~-~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++.+|... .+- .+|+-+|.. ..+..+-+ .|+ +-+ ..|+.+..+ +.+||+|.+..+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~-~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~i~~~~~ 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIV-RPE--AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS--EPPFDGVISRAF 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHH-CTT--SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC--CSCEEEEECSCS
T ss_pred CeEEEECCCCCHHHHHHHHH-CCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc--cCCcCEEEEecc
Confidence 37999999999999998863 121 134444433 33333332 244 222 223333221 368999998432
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcCHHHHHHHHHHHhhcCceeEEee---ecc-CCCccEEEEEcc
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIE---IES-NSDERLLICQKP 690 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~---~e~-~~~~~~li~~K~ 690 (697)
.....++-++-|+|+|||++++......-++++++.+ .|+..... ..+ +....++++.|.
T Consensus 142 ----------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ----------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ----------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ----------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 2244789999999999999999865555566666665 67755421 112 334667777663
No 315
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.84 E-value=7.3e-06 Score=83.19 Aligned_cols=116 Identities=14% Similarity=0.168 Sum_probs=75.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCccc----ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGlig----~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++..|.+. ... +|+-+|-. ..+..+-+ .|+-. +..|+ +.++.-+.+||+|+|..
T Consensus 48 ~~vLDiGcG~G~~~~~la~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGH-VTG---QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTT-CSS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESS
T ss_pred CEEEEeCCCCCHHHHHHHhc-cCC---EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcC
Confidence 58999999999999999873 122 33333433 44444433 34322 23333 33443247999999988
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-----------H----------HHHHHHHHHhhcCceeEEe
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------R----------LIESARALTTRLKWDARVI 674 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------~----------~~~~~~~~~~~~~W~~~~~ 674 (697)
++.+. +...+|-++-|+|||||++++.+.. . ..+++.++++..-++....
T Consensus 123 ~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 123 AIYNI-------GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp CGGGT-------CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred Cceec-------CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 87654 3467899999999999999997421 1 2356667777777776543
No 316
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.83 E-value=8.8e-06 Score=82.66 Aligned_cols=93 Identities=19% Similarity=0.143 Sum_probs=61.2
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC-cccccccccccCCCCCCccccccccCcccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-FVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG-lig~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
-.+|||+|||.|.++..|.+.+..| +-+|-. ..+..+-++. +--+..|. +.++.-+.+||+|||..++.++.
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~~v-----~gvD~s~~~~~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 108 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGLFV-----YAVEPSIVMRQQAVVHPQVEWFTGYA-ENLALPDKSVDGVISILAIHHFS 108 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTCEE-----EEECSCHHHHHSSCCCTTEEEECCCT-TSCCSCTTCBSEEEEESCGGGCS
T ss_pred CCEEEEEcCcccHHHHHHHhCCCEE-----EEEeCCHHHHHHHHhccCCEEEECch-hhCCCCCCCEeEEEEcchHhhcc
Confidence 3589999999999999998743333 333322 3333232332 21122233 33443348999999999887653
Q ss_pred CCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 624 GHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
+...+|-|+-|+|| ||++++.
T Consensus 109 ------~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 109 ------HLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp ------SHHHHHHHHHHHBC-SSCEEEE
T ss_pred ------CHHHHHHHHHHHhC-CcEEEEE
Confidence 35589999999999 9988875
No 317
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.83 E-value=1.4e-05 Score=79.11 Aligned_cols=93 Identities=16% Similarity=0.216 Sum_probs=62.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-cc-ccccccccCCCCCCccccccccC-c
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEG-L 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-ig-~~~~~~e~f~typrtyDl~H~~~-~ 618 (697)
.+|||+|||.|.++..|.+ . .+|+-+|-. ..+..+-++ |. +- +..|..+ ++ .+.+||+|.+.. +
T Consensus 35 ~~vLdiG~G~G~~~~~l~~--~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~~ 106 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLAD--H----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-LE-LPEPVDAITILCDS 106 (243)
T ss_dssp CEEEEESCTTCHHHHHHTT--T----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-CC-CSSCEEEEEECTTG
T ss_pred CeEEEecCCCCHHHHHHhh--C----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-cC-CCCCcCEEEEeCCc
Confidence 5899999999999999986 2 355555543 444444433 21 11 1223222 22 358999999875 6
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 650 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 650 (697)
+.+.. +.-....+|-++-|+|+|||.+++
T Consensus 107 ~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 107 LNYLQ---TEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GGGCC---SHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhcC---CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 66553 334556789999999999999998
No 318
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.83 E-value=8.9e-06 Score=80.69 Aligned_cols=116 Identities=18% Similarity=0.146 Sum_probs=79.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCc----ccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF----VGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGl----ig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-+++. --+..|.. .++.-+.+||+|.+..++.+
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY-----KAVGVDISEVMIQKGKERGEGPDLSFIKGDLS-SLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHTTTCBTTEEEEECBTT-BCSSCTTCEEEEEEESCTTS
T ss_pred CeEEEEcCCCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhcccCCceEEEcchh-cCCCCCCCccEEEEcChHhh
Confidence 3899999999999999997422 44444543 56666666632 11122222 23322489999999988876
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEcCH----------------------HHHHHHHHHHhhcCceeEEe
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------------RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------------~~~~~~~~~~~~~~W~~~~~ 674 (697)
.. ....+|-|+-|+|+|||++++.+.. ...++++.+++.-.++....
T Consensus 129 ~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 129 TE------EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp SS------CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred cc------CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 54 2347899999999999999996410 12356788888888887654
No 319
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.83 E-value=1.4e-05 Score=80.11 Aligned_cols=125 Identities=12% Similarity=0.080 Sum_probs=77.5
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----C-----------------------------
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G----------------------------- 591 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----G----------------------------- 591 (697)
-.+|||+|||.|.++..|... .. -+|+-+|-. ..+..+-++ +
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~--~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACE--SF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGG--TE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhc--cc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 468999999999999988762 22 345555543 334333221 1
Q ss_pred ---c-ccccccccccCCCCC---CccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH----------
Q 005417 592 ---F-VGVLHDWCEAFPTYP---RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------- 654 (697)
Q Consensus 592 ---l-ig~~~~~~e~f~typ---rtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------- 654 (697)
+ --+..|..+.-+.-+ .+||+|.|..++..... +.-....+|-|+-|+|+|||++|+.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACP--DLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcC--ChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 1 112233333222123 79999999888874321 1113457899999999999999997521
Q ss_pred ------HHHHHHHHHHhhcCceeEEeee
Q 005417 655 ------RLIESARALTTRLKWDARVIEI 676 (697)
Q Consensus 655 ------~~~~~~~~~~~~~~W~~~~~~~ 676 (697)
-..+++.+++....++......
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 1245777888777887765543
No 320
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.82 E-value=5.9e-06 Score=82.90 Aligned_cols=116 Identities=13% Similarity=0.198 Sum_probs=77.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcc----cccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGli----g~~~~~~e~f~typrtyDl~H~~~ 617 (697)
..|||+|||.|.++..|.+. .+. .|+-+|-. ..+..+-+ .|+- -+..|. +.++.-+.+||+|+|..
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~-~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADY-VKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHH-CCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEES
T ss_pred CeEEEeCCCCCHHHHHHHHh-CCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecC
Confidence 38999999999999999874 232 44444543 44544433 3442 223344 34443348999999988
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-----------H----------HHHHHHHHHhhcCceeEEe
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------R----------LIESARALTTRLKWDARVI 674 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------~----------~~~~~~~~~~~~~W~~~~~ 674 (697)
++.+. +...+|-|+-|+|||||++++.+.. . ..+++.++++.-.++...+
T Consensus 123 ~l~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 123 AIYNI-------GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CSCCC-------CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred hHhhc-------CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 87653 3557999999999999999997521 1 2355667777777765543
No 321
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.81 E-value=7e-06 Score=80.11 Aligned_cols=118 Identities=23% Similarity=0.206 Sum_probs=81.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-CcccccccccccCCCCCCccccccccCccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESG 624 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-Glig~~~~~~e~f~typrtyDl~H~~~~~~~~~~ 624 (697)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++ ++--...|.. .++ .+.+||+|.|..++.+..
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~- 116 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF-----DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVP- 116 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGSC-
T ss_pred CcEEEECCCCCHHHHHHHHcCC-----eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhcC-
Confidence 4799999999999999987422 44445543 555555555 4432333332 234 458999999998887653
Q ss_pred CCCCCCcchhhhhhcccccCCcEEEEEcCH---------------HHHHHHHHHHhhcC-ceeEEee
Q 005417 625 HRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------RLIESARALTTRLK-WDARVIE 675 (697)
Q Consensus 625 ~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------------~~~~~~~~~~~~~~-W~~~~~~ 675 (697)
.-....+|-|+-|+|+|||++++.... ...++++.+++.-. |+.....
T Consensus 117 ---~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 117 ---RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp ---HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred ---HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 124557999999999999999996221 24678888888888 8876554
No 322
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.81 E-value=1.6e-05 Score=81.25 Aligned_cols=92 Identities=15% Similarity=0.209 Sum_probs=63.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc--CcccccccccccCCCCCCccccccccCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R--Glig~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
.+|||+|||.|.++.+|.+... +|+-+|-. ..+..+-++ ++--+..|.. .++ ++.+||+|++..++....
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSGA-----EVLGTDNAATMIEKARQNYPHLHFDVADAR-NFR-VDKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSCEEECCTT-TCC-CSSCEEEEEEESCGGGCS
T ss_pred CEEEEecCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChh-hCC-cCCCcCEEEEcchhhhCc
Confidence 5899999999999999987332 33333433 444444444 2222222332 244 378999999988877543
Q ss_pred CCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 624 GHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
+...+|-|+-|+|||||++++.
T Consensus 132 ------d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 132 ------EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHhcCCCcEEEEE
Confidence 3457899999999999999996
No 323
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.81 E-value=1.6e-05 Score=75.84 Aligned_cols=138 Identities=17% Similarity=0.105 Sum_probs=76.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--ccccccccccCCCC-CCcccccccc-C
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPTY-PRTYDLVHAE-G 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig~~~~~~e~f~ty-prtyDl~H~~-~ 617 (697)
..|||+|||.|.++..|.+... .|+-+|-. ..+..+-+ .|+ +-+.++-.+.++.+ +.+||+|.++ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~-----~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSK-----KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSS-----EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CEEEEEcCCCCHHHHHHHHhCC-----EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 3799999999999999987322 34444433 44444333 354 33444444443323 4789999765 2
Q ss_pred ccccccCC--CCCCCcchhhhhhcccccCCcEEEEEcC------HHHHHHHHHHHhhcC---ceeEEeeeccC--CCccE
Q 005417 618 LLSLESGH--RHRCSTLDIFTEIDRILRPEGWVIIRDT------ARLIESARALTTRLK---WDARVIEIESN--SDERL 684 (697)
Q Consensus 618 ~~~~~~~~--~~~c~~~~~l~E~dRiLRP~G~~i~~d~------~~~~~~~~~~~~~~~---W~~~~~~~e~~--~~~~~ 684 (697)
.+..-... ...-.....|-|+-|+|||||.+++..- .+..+.+.+.+..+. |.+.....-+. ....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 178 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFL 178 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEE
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeE
Confidence 22210000 0001122567899999999999998532 234456666666665 76655544333 12344
Q ss_pred EEEEc
Q 005417 685 LICQK 689 (697)
Q Consensus 685 li~~K 689 (697)
++.+|
T Consensus 179 ~~i~~ 183 (185)
T 3mti_A 179 VMLEK 183 (185)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55444
No 324
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.81 E-value=1.2e-05 Score=78.44 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=65.3
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCccccccccc---ccCCCCCCccccccccCcccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWC---EAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGlig~~~~~~---e~f~typrtyDl~H~~~~~~~ 621 (697)
-.+|||+|||.|.++.+|.+. + .+|+-+|-. ..+..+-++..--+..|.. .+|+ +.+||+|.+..++.+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~---~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN--G---TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYE--EEQFDCVIFGDVLEH 105 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT--T---CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSC--TTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHhc--C---CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCC--CCccCEEEECChhhh
Confidence 358999999999999999873 3 345555544 4455555443211222333 3333 279999999988876
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.. +...+|-|+-|+|+|||++++..
T Consensus 106 ~~------~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 106 LF------DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp SS------CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred cC------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 64 23579999999999999999963
No 325
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.80 E-value=2.8e-05 Score=80.15 Aligned_cols=70 Identities=14% Similarity=0.084 Sum_probs=55.0
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCH-------HHHHHHHHc----CC--CcEEEeecccCC-C-CCC--C
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASG-------SQVQLTLER----GL--PAMIGSFASKQL-P-YPS--L 346 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~-------~ml~~A~er----gl--~~~~~~~da~~L-P-fpd--~ 346 (697)
..+|||+|||+|.++..+++.+ ..|+++|.++ .+++.|++. ++ .+.+..+|+..+ + +++ +
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 4789999999999999999875 4689999999 888888653 22 367777777663 3 444 6
Q ss_pred CccEEEeccc
Q 005417 347 SFDMLHCARC 356 (697)
Q Consensus 347 sFDlV~~~~~ 356 (697)
+||+|++...
T Consensus 161 ~fD~V~~dP~ 170 (258)
T 2r6z_A 161 KPDIVYLDPM 170 (258)
T ss_dssp CCSEEEECCC
T ss_pred CccEEEECCC
Confidence 8999999765
No 326
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.80 E-value=8.4e-06 Score=77.31 Aligned_cols=116 Identities=13% Similarity=0.141 Sum_probs=72.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-----ccccccccccCCCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-----VGVLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-----ig~~~~~~e~f~typrtyDl~H~~ 616 (697)
.+|||+|||.|.++.+|.+.. -+|+-+|-. ..+..+-++ |+ --+..|+.+.++ +.+||+|.++
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~~-----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADEV-----KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGGS-----SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CeEEEeCCCCCHHHHHHHHcC-----CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 479999999999999998732 234444433 344433333 33 223345555444 4799999997
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-HHHHHHHHHHhhcCceeEEe
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-~~~~~~~~~~~~~~W~~~~~ 674 (697)
..+... .-....++-++-|+|+|||.+++.+.. ....++.+..+..-+++.+.
T Consensus 127 ~~~~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 180 (194)
T 1dus_A 127 PPIRAG-----KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETV 180 (194)
T ss_dssp CCSTTC-----HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEE
T ss_pred CCcccc-----hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEE
Confidence 766431 123457899999999999999997543 33444555444443444444
No 327
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.80 E-value=6.4e-06 Score=83.53 Aligned_cols=95 Identities=24% Similarity=0.282 Sum_probs=63.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Ccc---c-ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV---G-VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gli---g-~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++..|.+. .. .+|+-+|-. ..+..+-++ |+- - +..|..+ ++.-+.+||+|.+..
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~-~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATA-RD---VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LPFEDASFDAVWALE 137 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHH-SC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCTTCEEEEEEES
T ss_pred CEEEEeCCCCCHHHHHHHHh-cC---CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CCCCCCCccEEEEec
Confidence 48999999999999999762 12 244444443 444444333 542 1 2223322 232137999999998
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
++.+.. + ...+|-|+-|+|+|||.+++.+
T Consensus 138 ~l~~~~---~---~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 138 SLHHMP---D---RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CTTTSS---C---HHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhCC---C---HHHHHHHHHHHcCCCeEEEEEE
Confidence 887664 2 3678999999999999999874
No 328
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.79 E-value=1.8e-05 Score=81.17 Aligned_cols=138 Identities=12% Similarity=0.178 Sum_probs=87.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc---ccccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl---ig~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++.+|... .+- .+|+-+|-. ..+.++-++ |+ --+..|+.++++ +.+||+|-++-.
T Consensus 111 ~~vLDlG~GsG~~~~~la~~-~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npP 185 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASE-RPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPP 185 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHH-CTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCC
T ss_pred CEEEEecCCccHHHHHHHHh-CCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCC
Confidence 37999999999999999852 221 144555543 444444332 33 223446666654 478999999754
Q ss_pred cccccC---------CCCC----------CCcchhhhhhcccccCCcEEEEEcCHHHHHHHHHHHhhcCceeEEeeeccC
Q 005417 619 LSLESG---------HRHR----------CSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESN 679 (697)
Q Consensus 619 ~~~~~~---------~~~~----------c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~e~~ 679 (697)
+..... .... -.+..++-++-|+|+|||++++.......++++++.+...|+......+..
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~~ 265 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYG 265 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECTT
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecCC
Confidence 432110 0000 122467788999999999999986666667777777777776443333445
Q ss_pred CCccEEEEEc
Q 005417 680 SDERLLICQK 689 (697)
Q Consensus 680 ~~~~~li~~K 689 (697)
+.+++++++|
T Consensus 266 g~~r~~~~~~ 275 (276)
T 2b3t_A 266 DNERVTLGRY 275 (276)
T ss_dssp SSEEEEEEEC
T ss_pred CCCcEEEEEE
Confidence 5788888875
No 329
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.79 E-value=4.7e-06 Score=81.03 Aligned_cols=117 Identities=20% Similarity=0.224 Sum_probs=80.4
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCccc---ccccccccCCCCCCccccccccCcccccc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVG---VLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGlig---~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
+|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-++|+.. +..|..+.++ +.+||+|.|..++.+..
T Consensus 49 ~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGLAD-----RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTP--DRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp EEEEESCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCC--SSCEEEEEEESCGGGSC
T ss_pred eEEEECCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCC--CCceeEEEEechhhcCC
Confidence 899999999999999987432 44444543 5566666666322 2223333322 37999999998887764
Q ss_pred CCCCCCCcchhhhhhcccccCCcEEEEEcCH----------------------------------HHHHHHHHHHhhcCc
Q 005417 624 GHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------------------------RLIESARALTTRLKW 669 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------------------------~~~~~~~~~~~~~~W 669 (697)
+ -.+..+|-|+-|+|+|||.+++.+.. ...++++++++.-.+
T Consensus 122 ---~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 197 (218)
T 3ou2_A 122 ---D-DRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGW 197 (218)
T ss_dssp ---H-HHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTE
T ss_pred ---H-HHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCC
Confidence 1 22467899999999999999987421 133667778888888
Q ss_pred eeEEee
Q 005417 670 DARVIE 675 (697)
Q Consensus 670 ~~~~~~ 675 (697)
++...+
T Consensus 198 ~v~~~~ 203 (218)
T 3ou2_A 198 SCSVDE 203 (218)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 765554
No 330
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.79 E-value=6.5e-06 Score=84.46 Aligned_cols=99 Identities=18% Similarity=0.226 Sum_probs=65.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cccc-------ccccccc-c---CCCCCCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG-------VLHDWCE-A---FPTYPRTY 610 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig-------~~~~~~e-~---f~typrty 610 (697)
.+|||+|||.|.++..|.+.+ . +|+-+|-. ..+..+-++ +.-. .-.|+.+ + |+ +.+|
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~--~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~f 131 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEG--F---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA--GDGF 131 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTT--C---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC--TTCE
T ss_pred CEEEEecCCCCHHHHHHHHCC--C---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccccc--CCCe
Confidence 579999999999999999742 2 56666654 566555443 1110 1122221 1 33 3799
Q ss_pred cccccc-CccccccC-CCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 611 DLVHAE-GLLSLESG-HRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 611 Dl~H~~-~~~~~~~~-~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
|+|+|. .++.+... ..+.-....+|-|+-|+|+|||++++..
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 999998 67766540 0012335679999999999999999974
No 331
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.78 E-value=5.2e-06 Score=83.26 Aligned_cols=97 Identities=21% Similarity=0.190 Sum_probs=66.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC-----cccccccccccCCCCCCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-----FVGVLHDWCEAFPTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG-----lig~~~~~~e~f~typrtyDl~H~~~~~~ 620 (697)
.+|||+|||.|.++.+|.+. .. .+|+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|++..++.
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~-~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEK-YG---AHTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HC---CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHH-cC---CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHHH
Confidence 58999999999999999873 11 244445543 5555555553 2122334433 232248999999998887
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+.. .-....+|-|+-|+|||||++++.+
T Consensus 132 ~~~----~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 132 ALS----LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcC----hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 762 1234578999999999999999974
No 332
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.78 E-value=2.3e-05 Score=82.72 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=51.3
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----CCcEEEee
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSF 336 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----l~~~~~~~ 336 (697)
....+.+.+.+...++ .+|||+|||+|.++..++++.. ...|+++|.++.|++.|+++. ..+.+.++
T Consensus 12 pvLl~e~l~~L~~~~g--------~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~ 82 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDE--------KIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKV 82 (301)
T ss_dssp CTTHHHHHHHHCCCTT--------CEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEEC
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 3345556666654443 7999999999999999998732 467999999999999998753 23444444
Q ss_pred cccCC
Q 005417 337 ASKQL 341 (697)
Q Consensus 337 da~~L 341 (697)
+...+
T Consensus 83 d~~~l 87 (301)
T 1m6y_A 83 SYREA 87 (301)
T ss_dssp CGGGH
T ss_pred CHHHH
Confidence 44443
No 333
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.78 E-value=1.7e-05 Score=76.48 Aligned_cols=138 Identities=9% Similarity=0.005 Sum_probs=83.3
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc---cccc-ccccccCC-CCCCccccccccC
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVL-HDWCEAFP-TYPRTYDLVHAEG 617 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl---ig~~-~~~~e~f~-typrtyDl~H~~~ 617 (697)
+|||+|||.|.++.+|.+.-.+- -+|+-+|-. ..+..+-++ |+ +-++ .|. +.++ ..+.+||+|-++.
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGEN--GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCEEEEEEEE
T ss_pred EEEEcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCceEEEEcC
Confidence 79999999999999988630011 144555543 444444333 43 2222 232 2233 3347999999876
Q ss_pred ccccccCCCCCC------CcchhhhhhcccccCCcEEEEEc------CHHHHHHHHHHHhhcC---ceeEEeeeccCC--
Q 005417 618 LLSLESGHRHRC------STLDIFTEIDRILRPEGWVIIRD------TARLIESARALTTRLK---WDARVIEIESNS-- 680 (697)
Q Consensus 618 ~~~~~~~~~~~c------~~~~~l~E~dRiLRP~G~~i~~d------~~~~~~~~~~~~~~~~---W~~~~~~~e~~~-- 680 (697)
.+-... +.. ....++-++-|+|+|||++++.. .....+.+....+.+. |++.....-+..
T Consensus 102 ~~~~~~---~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~ 178 (197)
T 3eey_A 102 GYLPSG---DHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANC 178 (197)
T ss_dssp SBCTTS---CTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSC
T ss_pred CcccCc---ccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccC
Confidence 551111 111 12358999999999999999874 1234566666666665 887776655442
Q ss_pred CccEEEEEccc
Q 005417 681 DERLLICQKPF 691 (697)
Q Consensus 681 ~~~~li~~K~~ 691 (697)
..-++|.+|.+
T Consensus 179 pp~~~~~~~~~ 189 (197)
T 3eey_A 179 PPILVCIEKIS 189 (197)
T ss_dssp CCEEEEEEECC
T ss_pred CCeEEEEEEcc
Confidence 35677777754
No 334
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.77 E-value=8.3e-06 Score=81.69 Aligned_cols=129 Identities=16% Similarity=0.297 Sum_probs=76.8
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc---cc-ccccccccCC-CCCCccccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFP-TYPRTYDLVHA 615 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl---ig-~~~~~~e~f~-typrtyDl~H~ 615 (697)
-.+|||+|||.|.++.+|.+. .+ ...|+-+|-. ..+..+-+ .|+ |- +..|..+..+ ..+.+||+|.+
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~-~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASI-SD--DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTT-CT--TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHh-CC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 468999999999999999862 12 1234444433 33333322 343 11 2334444444 44589999987
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-----------------HHHHHHHHHH----HhhcCceeEEe
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----------------ARLIESARAL----TTRLKWDARVI 674 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----------------~~~~~~~~~~----~~~~~W~~~~~ 674 (697)
+.-.. ....++-++-|+|||||++|+.+- ......++++ ...-+|+....
T Consensus 149 ~~~~~---------~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 219 (232)
T 3ntv_A 149 DAAKA---------QSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFL 219 (232)
T ss_dssp ETTSS---------SHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEE
T ss_pred cCcHH---------HHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 54333 244688899999999999999321 1123334433 33445665554
Q ss_pred eeccCCCccEEEEEcc
Q 005417 675 EIESNSDERLLICQKP 690 (697)
Q Consensus 675 ~~e~~~~~~~li~~K~ 690 (697)
.. .+.+.|++|+
T Consensus 220 p~----~dG~~i~~k~ 231 (232)
T 3ntv_A 220 NI----DDGLAISIKG 231 (232)
T ss_dssp CS----TTCEEEEEEC
T ss_pred Ec----CCceEEEEEC
Confidence 21 3678888874
No 335
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.76 E-value=4e-05 Score=80.62 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=85.5
Q ss_pred CCCceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHh----ccCcc----cccccccccCCCCCCccccc
Q 005417 542 PYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGFV----GVLHDWCEAFPTYPRTYDLV 613 (697)
Q Consensus 542 ~~~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~----~RGli----g~~~~~~e~f~typrtyDl~ 613 (697)
++....+|+|+|||.|.++.+|++....+- ++-.|-+..+..+- +.|+- =+-+|..+++| ..||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p---~~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLS---GTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLP---AGAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---CSCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCe---EEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCC---CCCcEE
Confidence 345678999999999999999986321221 22223333333332 23442 22345445544 489999
Q ss_pred cccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH----------------------HHHHHHHHHHhhcCcee
Q 005417 614 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------------RLIESARALTTRLKWDA 671 (697)
Q Consensus 614 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------------~~~~~~~~~~~~~~W~~ 671 (697)
.+..++..|.. -....+|-++=|+|+|||+++|.|.. ...++++++++.--++.
T Consensus 240 ~~~~vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 240 VLSAVLHDWDD----LSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp EEESCGGGSCH----HHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred EEehhhccCCH----HHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEE
Confidence 99999988762 12346899999999999999996531 11355666777767766
Q ss_pred EEeeeccCCCccEEEEEc
Q 005417 672 RVIEIESNSDERLLICQK 689 (697)
Q Consensus 672 ~~~~~e~~~~~~~li~~K 689 (697)
...... ++ ..++.++|
T Consensus 316 ~~~~~~-~~-~~vie~r~ 331 (332)
T 3i53_A 316 RAAHPI-SY-VSIVEMTA 331 (332)
T ss_dssp EEEEEC-SS-SEEEEEEE
T ss_pred EEEEEC-CC-cEEEEEee
Confidence 544322 22 56666665
No 336
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.75 E-value=8.1e-06 Score=81.89 Aligned_cols=93 Identities=18% Similarity=0.195 Sum_probs=63.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc------CcccccccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GFVGVLHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R------Glig~~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ .+--+..|. +.++.-+.+||+|++..++
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARGY-----RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTTC-----EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCG
T ss_pred CEEEEeCCcCCHHHHHHHHCCC-----EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCch
Confidence 5899999999999999987322 44444443 445544443 121222333 2344223799999998887
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
.... +...+|-|+-|+|+|||++++.
T Consensus 115 ~~~~------~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP------DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT------THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC------CHHHHHHHHHHHCCCCcEEEEE
Confidence 7653 3457899999999999999985
No 337
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.75 E-value=7e-06 Score=84.13 Aligned_cols=94 Identities=16% Similarity=0.163 Sum_probs=64.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc---ccc-cccccccCC-CCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGV-LHDWCEAFP-TYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl---ig~-~~~~~e~f~-typrtyDl~H~~ 616 (697)
..|||+|||.|.++..|.+.+. .|+-+|-. ..+..+-++ |+ +-+ ..|.. .++ ..+.+||+|.|.
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH-----QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQ-DVASHLETPVDLILFH 143 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGG-GTGGGCSSCEEEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHCCC-----EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHH-HhhhhcCCCceEEEEC
Confidence 4799999999999999987422 34444443 444444433 44 212 22333 333 334899999999
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.++.+.. ....+|-|+-|+|+|||++++.+
T Consensus 144 ~~l~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 144 AVLEWVA------DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp SCGGGCS------CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhccc------CHHHHHHHHHHHcCCCeEEEEEE
Confidence 9887764 23579999999999999999964
No 338
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.74 E-value=2.1e-05 Score=84.21 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=65.7
Q ss_pred ceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc----cCcc----cccccccccCCCCCCcccccccc
Q 005417 545 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 545 ~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~----RGli----g~~~~~~e~f~typrtyDl~H~~ 616 (697)
..+.|||+|||.|.++.+|++. .|-. .++-.|-+..+..+-+ .|+- =+-+|..+.-.++|.+||+|.+.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~-~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQY-NKEV--EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHH-STTC--EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHh-CCCC--EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe
Confidence 4689999999999999999863 2211 2333333333443333 3432 22334333211256889999999
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.++..|.. -....+|-++-|+|+|||.++|.|
T Consensus 256 ~vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFSE----EEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSCH----HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCCH----HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99987752 123468899999999999999864
No 339
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.73 E-value=1.5e-05 Score=79.53 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=79.3
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCc------cc-ccccccccCCCCCCccccccccC
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF------VG-VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGl------ig-~~~~~~e~f~typrtyDl~H~~~ 617 (697)
-.+|||+|||.|.++.+|++.. . -+|+-+|-. ..+..+-++.- +- +..|. +.++.-+.+||+|.+..
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~-~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL-F---REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT-C---SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEES
T ss_pred CCEEEEECCCCCHHHHHHHHhc-C---CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcc
Confidence 4589999999999999998631 1 134444433 33443333321 11 12232 23343246899999998
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH---------------HHHHHHHHHHhhcCceeEEeeec
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------RLIESARALTTRLKWDARVIEIE 677 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~---------------~~~~~~~~~~~~~~W~~~~~~~e 677 (697)
++.+.. + -.+..+|-|+-|+|+|||++++.+.. ...++++++++...++.......
T Consensus 155 ~l~~~~---~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 155 VIGHLT---D-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp CGGGSC---H-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhhCC---H-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 887654 1 12347899999999999999996531 13678888888888887665433
No 340
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.72 E-value=3.6e-05 Score=75.51 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=75.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Ccc--------cccccccccCCCCCCccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV--------GVLHDWCEAFPTYPRTYDLV 613 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gli--------g~~~~~~e~f~typrtyDl~ 613 (697)
.+|||+|||.|.|+.+|.+.. +. .+|+-+|-. ..+..+-++ |+- =+..|. +..+.-+.+||+|
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~-~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v 106 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDS-FF--EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAA 106 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCT-TC--SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEE
T ss_pred CEEEEeCCCCCHHHHHHHhhC-CC--CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEE
Confidence 589999999999999998632 21 133444433 444444333 221 111222 1122212689999
Q ss_pred cccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCHHH----------------------HHHHH----HHHhhc
Q 005417 614 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARL----------------------IESAR----ALTTRL 667 (697)
Q Consensus 614 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~----------------------~~~~~----~~~~~~ 667 (697)
.|..++.... .-.+..+|-++-|+|+|||.+++.+.... -++++ .+++.-
T Consensus 107 ~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 182 (217)
T 3jwh_A 107 TVIEVIEHLD----LSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERF 182 (217)
T ss_dssp EEESCGGGCC----HHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHS
T ss_pred eeHHHHHcCC----HHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHc
Confidence 9999887664 12345789999999999998888654321 23333 777777
Q ss_pred CceeEEee
Q 005417 668 KWDARVIE 675 (697)
Q Consensus 668 ~W~~~~~~ 675 (697)
.+++....
T Consensus 183 Gf~v~~~~ 190 (217)
T 3jwh_A 183 AYNVQFQP 190 (217)
T ss_dssp SEEEEECC
T ss_pred CceEEEEe
Confidence 78776653
No 341
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.72 E-value=0.00029 Score=74.12 Aligned_cols=104 Identities=17% Similarity=0.153 Sum_probs=76.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcC----------CCcEEEeecccCC-CCCCCCccEE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQL-PYPSLSFDML 351 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~erg----------l~~~~~~~da~~L-Pfpd~sFDlV 351 (697)
.+++||=||.|.|..+..++++. ...+|+.+|+++..++.+++.- ..+.+...|+... .-..++||+|
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 56899999999999999998873 4567999999999999887531 3455666665443 3456789999
Q ss_pred Eecccccccccc----HHHHHHHHHHhccCCeEEEEEeCCC
Q 005417 352 HCARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 352 ~~~~~llh~~~d----~~~~L~El~RvLKPGG~Lvis~p~~ 388 (697)
+.-.. -...+. ...+++.+++.|+|||.++.....+
T Consensus 162 i~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 97532 211111 1368999999999999999875433
No 342
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.71 E-value=2.8e-05 Score=79.91 Aligned_cols=84 Identities=11% Similarity=0.003 Sum_probs=59.3
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC---CcEEEeecc
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFAS 338 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl---~~~~~~~da 338 (697)
...+.+.+.+...+ ..+|||||||+|.++. +. ++ ....++++|+++.|++.++++.. ++.+..+|+
T Consensus 8 ~i~~~iv~~~~~~~--------~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~ 76 (252)
T 1qyr_A 8 FVIDSIVSAINPQK--------GQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDA 76 (252)
T ss_dssp HHHHHHHHHHCCCT--------TCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCG
T ss_pred HHHHHHHHhcCCCC--------cCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECch
Confidence 34455666555433 3789999999999999 65 33 22238999999999999987642 467788888
Q ss_pred cCCCCCCC-----CccEEEeccc
Q 005417 339 KQLPYPSL-----SFDMLHCARC 356 (697)
Q Consensus 339 ~~LPfpd~-----sFDlV~~~~~ 356 (697)
..+++++. ..|.|+++.-
T Consensus 77 ~~~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 77 MTFNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp GGCCHHHHHHHHTSCEEEEEECC
T ss_pred hhCCHHHhhcccCCceEEEECCC
Confidence 88876532 3467776644
No 343
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.71 E-value=0.00011 Score=85.82 Aligned_cols=105 Identities=15% Similarity=0.071 Sum_probs=71.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCC-----------------------------------------ceeEEEEecCCHHHHH
Q 005417 284 VRTILDIGCGYGSFGAHLFSKEL-----------------------------------------LTMCIANYEASGSQVQ 322 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~-----------------------------------------~~~sV~gvD~S~~ml~ 322 (697)
...|||.+||+|.++..++..+. ....++|+|+++.+++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 47899999999999877765310 1146999999999998
Q ss_pred HHHHc----CCC--cEEEeecccCC--CCCCCCccEEEecccc-ccccc--cHHHH---HHHHHHhccCCeEEEEEeCCC
Q 005417 323 LTLER----GLP--AMIGSFASKQL--PYPSLSFDMLHCARCG-VDWDQ--KDGIL---LLEVDRVLKPGGYFVWTSPLT 388 (697)
Q Consensus 323 ~A~er----gl~--~~~~~~da~~L--Pfpd~sFDlV~~~~~l-lh~~~--d~~~~---L~El~RvLKPGG~Lvis~p~~ 388 (697)
.|++. |+. +.+.+.|+..+ |..+++||+|+++--. ..+.. +...+ |.++.+.+.|||.+++.++..
T Consensus 271 ~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 271 RARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeCCH
Confidence 88754 554 56788888877 4444589999998431 11111 22333 444555566899999887654
No 344
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.69 E-value=1.6e-05 Score=77.36 Aligned_cols=92 Identities=22% Similarity=0.196 Sum_probs=61.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc--CcccccccccccCCCCCCccccccccCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R--Glig~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
.+|||+|||.|.++..| . .. +|+-+|-. ..+..+-++ ++--+..|. +.++.-+.+||+|.+..++.+..
T Consensus 38 ~~vLdiG~G~G~~~~~l-~--~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL-P--YP----QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp SEEEEETCTTCHHHHHC-C--CS----EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTCS
T ss_pred CeEEEECCCCCHhHHhC-C--CC----eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhcC
Confidence 48999999999999988 3 20 34444443 444445444 221122222 22332237999999988877653
Q ss_pred CCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 624 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
....+|-|+-|+|+|||.+++.+
T Consensus 110 ------~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 ------DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp ------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHHcCCCCEEEEEe
Confidence 35679999999999999999974
No 345
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.68 E-value=2.5e-05 Score=81.33 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=66.2
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH---cCCCcEEEeecccCCCCCCCCccEEEecccccc-
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD- 359 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~e---rgl~~~~~~~da~~LPfpd~sFDlV~~~~~llh- 359 (697)
..+|||+|||+|.++.+++++. ...++.++|++..+...+.. .+.++.....+++-..++.+.+|+|+|-.+ .+
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA-pns 168 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG-ESS 168 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCC-CCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCc-cCC
Confidence 3689999999999999988653 35678899997653221111 111222222222223456789999999865 44
Q ss_pred ---ccccHH--HHHHHHHHhccCC--eEEEEEeCCC
Q 005417 360 ---WDQKDG--ILLLEVDRVLKPG--GYFVWTSPLT 388 (697)
Q Consensus 360 ---~~~d~~--~~L~El~RvLKPG--G~Lvis~p~~ 388 (697)
..+... .+|.-+.++|+|| |.|++-.+.+
T Consensus 169 G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 169 PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 112211 3566678899999 9999988753
No 346
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.68 E-value=4.4e-05 Score=77.33 Aligned_cols=133 Identities=9% Similarity=0.075 Sum_probs=78.3
Q ss_pred eeEEEecccCchhhhhhhhccCCC-eEEEEeecCCCC-CchhhHhcc----Ccc----cccccccccCCCCCC--ccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILDR----GFV----GVLHDWCEAFPTYPR--TYDLV 613 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~-vwvmnv~p~~~~-~~l~~i~~R----Gli----g~~~~~~e~f~typr--tyDl~ 613 (697)
-++|||+|||.|.++.+|.+. .+ - -.|+-+|-. ..+..+-++ |+- =+..|..+.++..+. +||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~-~~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARE-LPAD--GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTT-SCTT--CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHh-CCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 468999999999999999863 11 0 123334432 444444333 542 123444444444444 89999
Q ss_pred cccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH------------HHHHHHHH----HHhhcCceeEEeeec
Q 005417 614 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARA----LTTRLKWDARVIEIE 677 (697)
Q Consensus 614 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e 677 (697)
.++.-... ...++-++-|+|||||++|+.+-. .....+++ +...-+|+......-
T Consensus 141 ~~d~~~~~---------~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 211 (248)
T 3tfw_A 141 FIDADKPN---------NPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV 211 (248)
T ss_dssp EECSCGGG---------HHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC
T ss_pred EECCchHH---------HHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC
Confidence 98653322 235788889999999999985431 22233333 444456766654211
Q ss_pred c-CCCccEEEEEcc
Q 005417 678 S-NSDERLLICQKP 690 (697)
Q Consensus 678 ~-~~~~~~li~~K~ 690 (697)
. ...+.+.|++|+
T Consensus 212 g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 212 GTKGWDGFTLAWVN 225 (248)
T ss_dssp STTCSEEEEEEEEC
T ss_pred CCCCCCeeEEEEEe
Confidence 1 224788888875
No 347
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.68 E-value=0.00012 Score=83.33 Aligned_cols=103 Identities=17% Similarity=0.074 Sum_probs=72.6
Q ss_pred CEEEEeCCCCchHHHHHhhcCC--------------ceeEEEEecCCHHHHHHHHH----cCCCcEE--EeecccCCC-C
Q 005417 285 RTILDIGCGYGSFGAHLFSKEL--------------LTMCIANYEASGSQVQLTLE----RGLPAMI--GSFASKQLP-Y 343 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~--------------~~~sV~gvD~S~~ml~~A~e----rgl~~~~--~~~da~~LP-f 343 (697)
.+|||.+||+|.+...+++.-. ....++|+|+++.+++.|+. +++...+ .++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 3899999999999877654200 13579999999999998875 3554444 555654444 5
Q ss_pred CCCCccEEEecccccc--ccc--------------------------cHHHHHHHHHHhccCCeEEEEEeCC
Q 005417 344 PSLSFDMLHCARCGVD--WDQ--------------------------KDGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 344 pd~sFDlV~~~~~llh--~~~--------------------------d~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
++..||+|+++--... |.. ..-.++..+.+.|||||++++..|.
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 5679999999744221 110 0125889999999999999998874
No 348
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.68 E-value=5.2e-05 Score=73.74 Aligned_cols=116 Identities=17% Similarity=0.076 Sum_probs=75.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc--c-cccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--V-GVLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl--i-g~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++..|.+..... +|+-+|-. ..+..+-++ |+ + -+..|..+.++.. .+||+|-++..
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~ 117 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNG---RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGS 117 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTS---EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCC
T ss_pred CEEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCC
Confidence 589999999999999998742111 23334433 444444332 43 1 1223333443332 57999988655
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEc-CHHHHHHHHHHHhhcCceeEEee
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~ 675 (697)
+. .+..++-++-|+|+|||.+++.. ..+..+++.++.+...|+.....
T Consensus 118 ~~---------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 166 (204)
T 3e05_A 118 GG---------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVAC 166 (204)
T ss_dssp TT---------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEEEE
T ss_pred Cc---------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeEEE
Confidence 43 34479999999999999999984 44677888888888888655543
No 349
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.68 E-value=1.8e-05 Score=78.04 Aligned_cols=132 Identities=13% Similarity=0.118 Sum_probs=75.8
Q ss_pred eeEEEecccCchhhhhhhhccCCC-eEEEEeecCCCC-CchhhHhc----cCccc----ccccccccCCCCC----Cccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYP----RTYD 611 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~-vwvmnv~p~~~~-~~l~~i~~----RGlig----~~~~~~e~f~typ----rtyD 611 (697)
-.+|||+|||.|.++.+|.+. .+ - ..|+-+|-. ..+..+-+ .|+-. +..|..+.++.++ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~-~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARG-LSSG--GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTT-CCSS--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHh-CCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 358999999999999999873 11 1 133444432 33433322 25422 2223333333222 5699
Q ss_pred cccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH------------HHHHHHHH----HHhhcCceeEEee
Q 005417 612 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARA----LTTRLKWDARVIE 675 (697)
Q Consensus 612 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~ 675 (697)
+|.++.....+ ..++-++-|+|||||++++.+.. .....+++ +...=+|+.....
T Consensus 136 ~v~~d~~~~~~---------~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p 206 (223)
T 3duw_A 136 FIFIDADKQNN---------PAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQ 206 (223)
T ss_dssp EEEECSCGGGH---------HHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred EEEEcCCcHHH---------HHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 99986554333 36888899999999999985331 12233333 3334457666654
Q ss_pred e-ccCCCccEEEEEc
Q 005417 676 I-ESNSDERLLICQK 689 (697)
Q Consensus 676 ~-e~~~~~~~li~~K 689 (697)
+ ...+.+.+.|+.|
T Consensus 207 ~~~~~~~dG~~~~~~ 221 (223)
T 3duw_A 207 TVGSKGYDGFIMAVV 221 (223)
T ss_dssp EEETTEEEEEEEEEE
T ss_pred ccCCCCCCeeEEEEE
Confidence 4 1222467787775
No 350
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.68 E-value=3e-05 Score=78.51 Aligned_cols=95 Identities=26% Similarity=0.307 Sum_probs=63.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCc-ccccccccccCCCCCCccccccccCccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-VGVLHDWCEAFPTYPRTYDLVHAEGLLSLESG 624 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGl-ig~~~~~~e~f~typrtyDl~H~~~~~~~~~~ 624 (697)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++.. .-+..|. +.++.-+.+||+|-+...+.++.
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~~- 128 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERGF-----EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDLPFPSGAFEAVLALGDVLSYV- 128 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTTC-----EEEEEESCHHHHHHHHHHTCSCEEECCT-TSCCSCTTCEEEEEECSSHHHHC-
T ss_pred CeEEEeCCCcCHHHHHHHHcCC-----eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHCCCCCCCEEEEEEcchhhhcc-
Confidence 4799999999999999987322 44444543 45555555543 1111122 22332237999999987665553
Q ss_pred CCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 625 HRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 625 ~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
. +...+|-|+-|+|+|||.+++..
T Consensus 129 --~--~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 129 --E--NKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp --S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --c--cHHHHHHHHHHHcCCCeEEEEEe
Confidence 1 26689999999999999999864
No 351
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.67 E-value=9.7e-05 Score=74.70 Aligned_cols=128 Identities=18% Similarity=0.143 Sum_probs=77.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCc-cc-----cccccc-ccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-VG-----VLHDWC-EAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGl-ig-----~~~~~~-e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|+|+..|++. ..- .|+-+|-. +.|..+..+.- +. -+...+ +.++. .-||.+-++-+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~--g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v 112 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQN--GAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVS 112 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHT--TCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCS
T ss_pred CEEEEEccCCCHHHHHHHhc--CCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEE
Confidence 47999999999999999873 211 34445543 56655544321 11 111112 33332 01344444444
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEc-------------------CH---HHHHHHHHHHhhcCceeEEeee
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-------------------TA---RLIESARALTTRLKWDARVIEI 676 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-------------------~~---~~~~~~~~~~~~~~W~~~~~~~ 676 (697)
|+.. ..+|-|+-|+|+|||++++-- .. ..++++.++++...|++...+.
T Consensus 113 ~~~l---------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 113 FISL---------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp SSCG---------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred hhhH---------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 4433 469999999999999999741 11 2466788888888898776654
Q ss_pred cc-----CCCccEEEEEc
Q 005417 677 ES-----NSDERLLICQK 689 (697)
Q Consensus 677 e~-----~~~~~~li~~K 689 (697)
.. ++-+-++.++|
T Consensus 184 ~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 184 SPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp CSSCBTTTBCCEEEEEEE
T ss_pred ccCCCCCCCHHHHHHHhh
Confidence 32 22355666666
No 352
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.66 E-value=4.5e-05 Score=78.78 Aligned_cols=98 Identities=11% Similarity=0.182 Sum_probs=59.8
Q ss_pred eEEEecccCchhhhhh----hhccCCCeEEEEeecCCCC-CchhhHhcc-----Cccccccccc----ccCC-----CC-
Q 005417 547 RNVLDMNAHFGGFNSA----LLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWC----EAFP-----TY- 606 (697)
Q Consensus 547 RnvmDm~~g~g~Faaa----l~~~~~~vwvmnv~p~~~~-~~l~~i~~R-----Glig~~~~~~----e~f~-----ty- 606 (697)
..|||+|||.|.++.. |......+- ..++-+|.. .-|..+-+| |+-.+-..|. +.++ .+
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~-v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVC-INNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCE-EEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCce-eeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 4799999999987643 332111232 233444443 444444433 4322211111 1222 02
Q ss_pred CCccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 607 PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 607 prtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
+.+||+|+|..++.++. +....|-||-|+|||||++++.
T Consensus 133 ~~~fD~V~~~~~l~~~~------d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVK------DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCEEEEEEESCGGGCS------CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecC------CHHHHHHHHHHHcCCCcEEEEE
Confidence 38999999999988765 3557899999999999999985
No 353
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.66 E-value=1.5e-05 Score=82.40 Aligned_cols=94 Identities=10% Similarity=-0.004 Sum_probs=60.7
Q ss_pred eeEEEecccCchhhhhhhhcc-CCCeEEEEeecCCCC-CchhhHhcc-----Ccccc----cccccccCCCCC------C
Q 005417 546 VRNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR-----GFVGV----LHDWCEAFPTYP------R 608 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~-~~~vwvmnv~p~~~~-~~l~~i~~R-----Glig~----~~~~~e~f~typ------r 608 (697)
-.+|||+|||.|.++..|.+. +.. -+|+-+|-. ..+..+-++ |...- ..|.. .++.-. .
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPF---EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDKQ 112 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCC---SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTSS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC---CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccCC
Confidence 468999999999999999831 011 134444443 455555443 22111 12222 222112 6
Q ss_pred ccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEE
Q 005417 609 TYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 650 (697)
Q Consensus 609 tyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 650 (697)
+||+|+|..++... ....+|-|+-|+|||||++++
T Consensus 113 ~fD~V~~~~~l~~~-------~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF-------DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS-------CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-------CHHHHHHHHHHhcCCCcEEEE
Confidence 89999998877643 456899999999999999998
No 354
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.66 E-value=4.6e-05 Score=75.64 Aligned_cols=96 Identities=17% Similarity=0.196 Sum_probs=54.1
Q ss_pred EEEecccCchhhhhhhhccC--CCeEEEEeecCCCCCchhhHhcc-Cccccccccccc--CCCCCCccccccccCccccc
Q 005417 548 NVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEA--FPTYPRTYDLVHAEGLLSLE 622 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~--~~vwvmnv~p~~~~~~l~~i~~R-Glig~~~~~~e~--f~typrtyDl~H~~~~~~~~ 622 (697)
+|||+|||.|.++..|.+.- ..|.-+-+.|.--...+..+-.+ ++.-+..|-.++ +..++.+||+|.|+- .
T Consensus 60 ~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~--~-- 135 (210)
T 1nt2_A 60 RVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI--A-- 135 (210)
T ss_dssp EEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC--C--
T ss_pred EEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec--c--
Confidence 79999999999998887521 12333222221000011222222 233334454443 123458999999862 1
Q ss_pred cCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 623 SGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 623 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
..-....++-|+-|+|||||.+++.
T Consensus 136 ----~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 136 ----QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1111224588999999999999985
No 355
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.66 E-value=2.6e-05 Score=77.18 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=63.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC----cccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG----lig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.++.+|.+.+.. +|+-+|-. ..+..+-++. +--+..|..+ ++.-+.+||+|.+..++.+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGAS----YVLGLDLSEKMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGG
T ss_pred CEEEEEcCcCCHHHHHHHHCCCC----eEEEEcCCHHHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEeccccc
Confidence 58999999999999999874220 33333433 4444444443 2222233332 3322479999999888776
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.. ....+|-++-|+|+|||.+++..
T Consensus 120 ~~------~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE------DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc------hHHHHHHHHHHhcCcCcEEEEEe
Confidence 53 35578999999999999999864
No 356
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.65 E-value=4.3e-05 Score=76.67 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=78.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--ccccccccccCCC---CCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPT---YPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig~~~~~~e~f~t---yprtyDl~H~~ 616 (697)
.+|||+|||.|.++..|....... .|+-+|.. ..+.++-+ .|+ |-+++.=.+.++. .+.+||+|.+.
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 589999999999888887311111 23444433 33333322 344 3333322233332 35789999985
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC---HHHHHHHHHHHhhcCceeEEeee---ccC-CCccEEEEEc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT---ARLIESARALTTRLKWDARVIEI---ESN-SDERLLICQK 689 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~---~~~~~~~~~~~~~~~W~~~~~~~---e~~-~~~~~li~~K 689 (697)
.+ ..+..++-++-|+|+|||++++.+. .+.++++.+.++...++...... ... +...+++.+|
T Consensus 149 ~~----------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k 218 (240)
T 1xdz_A 149 AV----------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRK 218 (240)
T ss_dssp CC----------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred cc----------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEe
Confidence 52 2355789999999999999998653 45566677777777777644321 111 2345666666
Q ss_pred c
Q 005417 690 P 690 (697)
Q Consensus 690 ~ 690 (697)
.
T Consensus 219 ~ 219 (240)
T 1xdz_A 219 I 219 (240)
T ss_dssp C
T ss_pred c
Confidence 5
No 357
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.64 E-value=4.5e-05 Score=78.84 Aligned_cols=112 Identities=16% Similarity=0.225 Sum_probs=75.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCccc---cc-ccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVG---VL-HDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGlig---~~-~~~~e~f~typrtyDl~H~~~ 617 (697)
..|||+|||.|+|+.+|...... .|+-+|-. ..+..+-+ .|+-. .+ .|. +.++. +.+||+|.++.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~----~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~-~~~~~-~~~fD~Vi~~~ 200 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA----KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN-RDFPG-ENIADRILMGY 200 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC----EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT-TTCCC-CSCEEEEEECC
T ss_pred CEEEEecccCCHHHHHHHHhCCC----EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH-HHhcc-cCCccEEEECC
Confidence 47999999999999998864333 24444443 34433332 25432 22 222 22332 57999998854
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-------HHHHHHHHHHHhhcCceeEEe
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-------ARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-------~~~~~~~~~~~~~~~W~~~~~ 674 (697)
.++ ...++-++-|+|+|||++++.+. .+..+++.+.++...|++...
T Consensus 201 p~~----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 201 VVR----------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp CSS----------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred chh----------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 433 23578889999999999999543 356788899999999998874
No 358
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.64 E-value=6.9e-05 Score=79.63 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=81.1
Q ss_pred CCceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchh--hHhccCcc----cccccccccCCCCCCcccccccc
Q 005417 543 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLP--MILDRGFV----GVLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 543 ~~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~--~i~~RGli----g~~~~~~e~f~typrtyDl~H~~ 616 (697)
+....+|||+|||.|.++.+|++....+- ++-.|-+..+. .+-+.|+- =+-+|..+++ | +||+|.+.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~---p-~~D~v~~~ 254 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQ---GVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREV---P-HADVHVLK 254 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEE---EEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCC---C-CCSEEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCE---EEEecCHHHhhcccccccCCCCCeEEEecCCCCCC---C-CCcEEEEe
Confidence 34578999999999999999986322221 22222221111 01112332 2234444444 4 89999999
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-------------------------HHHHHHHHHHhhcCcee
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------------------RLIESARALTTRLKWDA 671 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------------------~~~~~~~~~~~~~~W~~ 671 (697)
.++..|.. -....+|-|+-|+|||||.++|.|.. ...++++++++.--++.
T Consensus 255 ~vlh~~~d----~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 330 (348)
T 3lst_A 255 RILHNWGD----EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRL 330 (348)
T ss_dssp SCGGGSCH----HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEE
T ss_pred hhccCCCH----HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCce
Confidence 99987752 12246899999999999999996521 12456667777777776
Q ss_pred EEeeeccCCCccEEEEEc
Q 005417 672 RVIEIESNSDERLLICQK 689 (697)
Q Consensus 672 ~~~~~e~~~~~~~li~~K 689 (697)
..... .++...++.++|
T Consensus 331 ~~~~~-~~~~~~vie~~p 347 (348)
T 3lst_A 331 DRVVG-TSSVMSIAVGVP 347 (348)
T ss_dssp EEEEE-CSSSCEEEEEEE
T ss_pred EEEEE-CCCCcEEEEEEe
Confidence 55433 233344554443
No 359
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.64 E-value=1.2e-05 Score=79.62 Aligned_cols=97 Identities=19% Similarity=0.253 Sum_probs=62.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-----CcccccccccccCCCCCCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-----Glig~~~~~~e~f~typrtyDl~H~~~~~~ 620 (697)
.+|||+|||.|.++.+|.+. .+- .+|+-+|-. ..+..+-++ .+--+..|.. .++ ++.+||+|.|..++.
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~-~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEK-YPE--ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYS-KYD-FEEKYDMVVSALSIH 120 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHH-CTT--CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTT-TCC-CCSCEEEEEEESCGG
T ss_pred CeEEEecCCCCHHHHHHHHh-CCC--CeEEEEECCHHHHHHHHHhhccCCCEEEEeCchh-ccC-CCCCceEEEEeCccc
Confidence 68999999999999999874 111 133444433 444444443 1211222322 222 238999999998887
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.... -....+|-|+-|+|+|||++++.+
T Consensus 121 ~~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLED----EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSCH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCH----HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6641 112248999999999999999975
No 360
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.63 E-value=3.5e-05 Score=76.48 Aligned_cols=109 Identities=8% Similarity=0.067 Sum_probs=71.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC--cccccccccccCCCC-CCccccccccCccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTY-PRTYDLVHAEGLLSLE 622 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG--lig~~~~~~e~f~ty-prtyDl~H~~~~~~~~ 622 (697)
..|||+|||.|.++.+|.+.+. .|+-+|-. ..+..+-++. +-=+..|+.+.+|.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA-----RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 4799999999999999987422 45555544 5565565552 222345565555532 4799999984
Q ss_pred cCCCCCCCcchhhhhhcccccCCcEEEEEcCHHHHHHHHHHHhhcCceeE
Q 005417 623 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDAR 672 (697)
Q Consensus 623 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~ 672 (697)
-....+|-|+-|+|||||.++.-......+.+.+......++..
T Consensus 119 ------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 119 ------RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDIV 162 (226)
T ss_dssp ------SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEEE
T ss_pred ------CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 12346899999999999999944322233455555555555443
No 361
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.63 E-value=3.5e-05 Score=75.49 Aligned_cols=97 Identities=23% Similarity=0.249 Sum_probs=62.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----C--cccccccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G--FVGVLHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----G--lig~~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
.+|||+|||.|.++..|.+.. + +|+-+|-. ..+..+-++ | +--+..|..+ ++.-+.+||+|.+..++
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~-~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYG-F----EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTT-C----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CCSCTTCEEEEEEESCG
T ss_pred CeEEEEeccCCHHHHHHHHcC-C----EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CCCCCCcEEEEEEcCch
Confidence 579999999999999998742 2 44544543 444443332 1 2222333333 22213799999998874
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
..+. .-....+|-++-|+|+|||.+++.+.
T Consensus 114 ~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 114 VHFE----PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp GGCC----HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCC----HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 4332 12345789999999999999999754
No 362
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.63 E-value=2e-05 Score=79.36 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=62.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC----c-c-ccccccc---ccCCCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----F-V-GVLHDWC---EAFPTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG----l-i-g~~~~~~---e~f~typrtyDl~H~~ 616 (697)
..|||+|||.|.++.+|.+ ... -+|+-++-+ ..+..+-++. . + =+..+|. ..++. .+||.|..+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~--~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~FD~i~~D 135 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQE--API--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD--GHFDGILYD 135 (236)
T ss_dssp EEEEEECCTTSHHHHHHTT--SCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT--TCEEEEEEC
T ss_pred CeEEEECCCccHHHHHHHH--hCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccc--cCCceEEEe
Confidence 4699999999999999976 222 244555554 5666555432 2 1 1223443 34544 789999876
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
...+.+.. .+.-....++=|+-|+|||||.|++-
T Consensus 136 ~~~~~~~~-~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEET-WHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGG-TTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccch-hhhcchhhhhhhhhheeCCCCEEEEE
Confidence 66554431 01123447888999999999999974
No 363
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.62 E-value=9.3e-05 Score=68.54 Aligned_cols=131 Identities=11% Similarity=0.136 Sum_probs=72.2
Q ss_pred eEEEecccCchhhhhhhhcc---CCCeEEEEeecCCCCCchhhHhccCccccccccccc---------CCCCCCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEA---------FPTYPRTYDLVH 614 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~---~~~vwvmnv~p~~~~~~l~~i~~RGlig~~~~~~e~---------f~typrtyDl~H 614 (697)
.+|||+|||.|.++.+|.+. +..|..+-+.| ...+ ..+--+..|..+. ++ +.+||+|.
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~--~~~~D~i~ 93 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDPI-----VGVDFLQGDFRDELVMKALLERVG--DSKVQVVM 93 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCCC-----TTEEEEESCTTSHHHHHHHHHHHT--TCCEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---cccc-----CcEEEEEcccccchhhhhhhccCC--CCceeEEE
Confidence 38999999999999999863 12344444333 1111 1111122233222 33 27899999
Q ss_pred ccCccccccCCCCCCC------cchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhcCceeEEeeecc----CCCcc
Q 005417 615 AEGLLSLESGHRHRCS------TLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVIEIES----NSDER 683 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~------~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~~~e~----~~~~~ 683 (697)
++..+..... ...-. ...+|-++-|+|+|||.+++... ......+.+.... .|+........ ...+.
T Consensus 94 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 171 (180)
T 1ej0_A 94 SDMAPNMSGT-PAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREV 171 (180)
T ss_dssp ECCCCCCCSC-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEE
T ss_pred ECCCccccCC-CccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceE
Confidence 9777653220 00000 14688999999999999999632 1223333333333 36544332221 12477
Q ss_pred EEEEEc
Q 005417 684 LLICQK 689 (697)
Q Consensus 684 ~li~~K 689 (697)
.+||++
T Consensus 172 ~~~~~~ 177 (180)
T 1ej0_A 172 YIVATG 177 (180)
T ss_dssp EEEEEE
T ss_pred EEEEcc
Confidence 777765
No 364
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.62 E-value=1.6e-05 Score=82.98 Aligned_cols=93 Identities=13% Similarity=0.089 Sum_probs=62.6
Q ss_pred eeEEEecccCchhhhhhhhcc-CCCeEEEEeecCCCC-CchhhHhc----cCccc----ccccccccCCCCC-Ccccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYP-RTYDLVH 614 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~-~~~vwvmnv~p~~~~-~~l~~i~~----RGlig----~~~~~~e~f~typ-rtyDl~H 614 (697)
-.+|||+|||.|.++..|.+. +. .|+-+|-. ..+..+-+ .|+-+ +..|.. .++ +| .+||+|.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~~fD~V~ 190 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGS-----RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTP-FDKGAVTASW 190 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC-CCTTCEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHcCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCC-CCCCCEeEEE
Confidence 357999999999999999873 22 33444433 44444433 34421 222332 233 33 7999999
Q ss_pred ccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+..++... ....+|-|+-|+|||||++++.+
T Consensus 191 ~~~~l~~~-------~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMYV-------DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGGS-------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhC-------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 98777654 26689999999999999999853
No 365
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.60 E-value=6.1e-05 Score=75.35 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=62.7
Q ss_pred eEEEecccCchhhhhhhhcc--CCCeEEEEeecCCCC-CchhhHhccC--cccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK--GKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~--~~~vwvmnv~p~~~~-~~l~~i~~RG--lig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.++.+|.+. ...| +-+|-. ..+..+-++. +--+..|. +.++ -+.+||+|++..++..
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v-----~~~D~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVI-----TGIDSDDDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSE-----EEEESCHHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGGG
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEE-----EEEECCHHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchhh
Confidence 47999999999999999863 2223 333332 4455554441 11122232 2344 3579999999888776
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.. +...+|-|+-|+|+|||++++..
T Consensus 108 ~~------~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 108 VP------DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ST------THHHHHHHHGGGEEEEEEEEEEE
T ss_pred CC------CHHHHHHHHHHhcCCCeEEEEEe
Confidence 53 35578999999999999999974
No 366
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.58 E-value=2.7e-05 Score=76.77 Aligned_cols=112 Identities=15% Similarity=0.187 Sum_probs=76.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCcccccccccccCCCCCCccccccccCccccccCC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH 625 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGlig~~~~~~e~f~typrtyDl~H~~~~~~~~~~~ 625 (697)
.+|||+|||.|.++..|.. . +-+|.. ..+..+-++++--+..|. +.++.-+.+||+|.+..++....
T Consensus 49 ~~vLDiG~G~G~~~~~l~~--~-------~~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~-- 116 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKI--K-------IGVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFVD-- 116 (219)
T ss_dssp SCEEEETCTTSTTHHHHTC--C-------EEEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGSS--
T ss_pred CcEEEeCCCCCHHHHHHHH--H-------hccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhcc--
Confidence 4799999999999999976 3 222332 555566666542222332 22332236999999998877653
Q ss_pred CCCCCcchhhhhhcccccCCcEEEEEcCH------------------------HHHHHHHHHHhhcCceeEEe
Q 005417 626 RHRCSTLDIFTEIDRILRPEGWVIIRDTA------------------------RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 626 ~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------------------~~~~~~~~~~~~~~W~~~~~ 674 (697)
....+|-++-|+|+|||++++.+.. ...++++++++...++....
T Consensus 117 ----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 117 ----DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp ----CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 2457999999999999999996311 13467788888888876554
No 367
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.58 E-value=6.9e-05 Score=79.87 Aligned_cols=136 Identities=19% Similarity=0.169 Sum_probs=84.2
Q ss_pred CceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc----cCcc----cccccccccCCCCCCccccccc
Q 005417 544 NMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHA 615 (697)
Q Consensus 544 ~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~----RGli----g~~~~~~e~f~typrtyDl~H~ 615 (697)
..-.+|+|+|||.|.++.+|.+....+ .++-.|-+..+..+-+ .|+- =+-+|..+++ |..||+|.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHL---RGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPL---PVTADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SCCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---EEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---CCCCCEEEE
Confidence 345789999999999999998742122 2222222223332222 3432 2334544444 446999999
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC--H--H-----------------------HHHHHHHHHhhcC
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--A--R-----------------------LIESARALTTRLK 668 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--~--~-----------------------~~~~~~~~~~~~~ 668 (697)
..++..+.. . ....+|-++-|+|+|||+++|.|. . + ..++++++++.-.
T Consensus 255 ~~vl~~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 330 (374)
T 1qzz_A 255 SFVLLNWSD--E--DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAG 330 (374)
T ss_dssp ESCGGGSCH--H--HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTT
T ss_pred eccccCCCH--H--HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 999887652 1 123689999999999999998765 2 1 2345666777777
Q ss_pred ceeEEeeeccCCCc-----cEEEEEcc
Q 005417 669 WDARVIEIESNSDE-----RLLICQKP 690 (697)
Q Consensus 669 W~~~~~~~e~~~~~-----~~li~~K~ 690 (697)
++......- ++.. .++.++|+
T Consensus 331 f~~~~~~~~-~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 331 LALASERTS-GSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEEEEEEEE-CCSSCSSCEEEEEEEEC
T ss_pred CceEEEEEC-CCCcccCCcEEEEEEEC
Confidence 775544322 2233 78888875
No 368
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.57 E-value=4.6e-05 Score=73.61 Aligned_cols=113 Identities=11% Similarity=0.116 Sum_probs=71.5
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-cccc-ccccccCCCCCCccccccccCccc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-ig~~-~~~~e~f~typrtyDl~H~~~~~~ 620 (697)
+|||+|||.|.++.+|.+. .. +|+-+|-. ..+..+-++ |+ +-++ .|. +.++.-+.+||+|.+. +.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~--~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFDIVADAWEGIVSI--FC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBSCCTTTCSEEEEE--CC
T ss_pred CEEEECCCCCHhHHHHHhC--CC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcCCCcCCccEEEEE--hh
Confidence 8999999999999999873 22 55555654 455544443 33 1111 222 2233223799999984 32
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEcC----H-------------HHHHHHHHHHhhcCceeEEe
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----A-------------RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----~-------------~~~~~~~~~~~~~~W~~~~~ 674 (697)
++ ..-....+|-++-|+|+|||++++.+. . -..++++++.+ .|++...
T Consensus 104 ~~----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 104 HL----PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CC----CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred cC----CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 22 112355789999999999999999631 0 22466777776 6776554
No 369
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.57 E-value=8.8e-05 Score=72.86 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=75.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--cc-ccccccccCCC-C-CCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPT-Y-PRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig-~~~~~~e~f~t-y-prtyDl~H~~ 616 (697)
..|||+|||.|.|+.+|... .|- .+|+-+|-. ..+..+.+ .|+ +- +..|..+ ++. + +.+||+|.+.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~-~p~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQ-NPD--INYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHH-CTT--SEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHH-CCC--CCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 46999999999999998763 211 245555543 44444433 243 11 2233333 331 2 3789999986
Q ss_pred CccccccC---CCCCCCcchhhhhhcccccCCcEEEEE-cCHHHHHHHHHHHhhcCceeEEe
Q 005417 617 GLLSLESG---HRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 617 ~~~~~~~~---~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~~~ 674 (697)
.... |.. ...+-....+|-++-|+|+|||.+++. |..+..+.+.++.....|+....
T Consensus 119 ~~~~-~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 119 FSDP-WPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp SCCC-CCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCC-ccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 4321 210 001122357899999999999999997 46566777777777767776544
No 370
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.57 E-value=2.5e-05 Score=77.94 Aligned_cols=98 Identities=17% Similarity=0.126 Sum_probs=59.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC----c-cc-ccccccc---cCCCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----F-VG-VLHDWCE---AFPTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG----l-ig-~~~~~~e---~f~typrtyDl~H~~ 616 (697)
..|||+|||.|.++..|.+ ... -+|+-+|.. ..+..+-++. . +- +..|+.+ +|+. .+||+|.++
T Consensus 62 ~~vLDiGcGtG~~~~~l~~--~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~--~~fD~V~~d 135 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQE--API--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD--GHFDGILYD 135 (236)
T ss_dssp EEEEEECCTTSHHHHHHHT--SCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT--TCEEEEEEC
T ss_pred CeEEEEeccCCHHHHHHHh--cCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCC--CceEEEEEC
Confidence 4799999999999999975 222 145555554 5555554432 1 11 1223322 4443 799999983
Q ss_pred -CccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 617 -GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 617 -~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
..+ .... .+.-....++-|+-|+|||||.+++-+
T Consensus 136 ~~~~-~~~~-~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 136 TYPL-SEET-WHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCC-BGGG-TTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred Cccc-chhh-hhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 222 1110 011122357899999999999999864
No 371
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.57 E-value=2.5e-05 Score=84.33 Aligned_cols=116 Identities=22% Similarity=0.203 Sum_probs=76.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc---------C-c----cc-ccccccc-------cC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---------G-F----VG-VLHDWCE-------AF 603 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R---------G-l----ig-~~~~~~e-------~f 603 (697)
..|||+|||.|.++..|.+.-.+- -.|+-+|-. ..+..+-++ | + +- +..|..+ +|
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEH--GKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTT--CEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 579999999999998887621011 134444443 555555554 4 1 11 2233332 33
Q ss_pred CCCCCccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-----------------------HHHHHH
Q 005417 604 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------------------RLIESA 660 (697)
Q Consensus 604 ~typrtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-----------------------~~~~~~ 660 (697)
+ +.+||+|++..++.... + ...+|-|+-|+|||||++++.+-. -..+++
T Consensus 163 ~--~~~fD~V~~~~~l~~~~---d---~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
T 4fsd_A 163 P--DSSVDIVISNCVCNLST---N---KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDF 234 (383)
T ss_dssp C--TTCEEEEEEESCGGGCS---C---HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHH
T ss_pred C--CCCEEEEEEccchhcCC---C---HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHH
Confidence 3 37999999999887664 2 458999999999999999997411 113677
Q ss_pred HHHHhhcCceeE
Q 005417 661 RALTTRLKWDAR 672 (697)
Q Consensus 661 ~~~~~~~~W~~~ 672 (697)
.+++..-.++..
T Consensus 235 ~~ll~~aGF~~v 246 (383)
T 4fsd_A 235 RRLVAEAGFRDV 246 (383)
T ss_dssp HHHHHHTTCCCE
T ss_pred HHHHHHCCCceE
Confidence 788888777643
No 372
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.55 E-value=6.5e-05 Score=87.03 Aligned_cols=98 Identities=18% Similarity=0.116 Sum_probs=66.9
Q ss_pred CCEEEEeCCCCchHHHHH---hh-cC--------CceeEEEEecCCHHHHHHHHH---cC--CCcEEEeecccCCCCC--
Q 005417 284 VRTILDIGCGYGSFGAHL---FS-KE--------LLTMCIANYEASGSQVQLTLE---RG--LPAMIGSFASKQLPYP-- 344 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~L---a~-~g--------~~~~sV~gvD~S~~ml~~A~e---rg--l~~~~~~~da~~LPfp-- 344 (697)
...|||||||+|.+.... ++ .+ .....|+++|.++..+..++. .+ -.+.+...+++.+..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 357999999999996432 21 11 134589999999865543332 23 3477788888887663
Q ss_pred ---CCCccEEEeccccccccc--cHHHHHHHHHHhccCCeEEE
Q 005417 345 ---SLSFDMLHCARCGVDWDQ--KDGILLLEVDRVLKPGGYFV 382 (697)
Q Consensus 345 ---d~sFDlV~~~~~llh~~~--d~~~~L~El~RvLKPGG~Lv 382 (697)
.+..|+|++..... +.. --...|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGs-fl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGS-FGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBT-TBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEecccc-ccchhccHHHHHHHHHhCCCCcEEE
Confidence 46899999985422 221 12467888899999999876
No 373
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.55 E-value=0.00044 Score=78.54 Aligned_cols=105 Identities=21% Similarity=0.161 Sum_probs=75.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhcC--CceeEEEEecCCHHHHHHHHH----cCC---CcEEEeecccCC--C-CCCCCccE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKE--LLTMCIANYEASGSQVQLTLE----RGL---PAMIGSFASKQL--P-YPSLSFDM 350 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g--~~~~sV~gvD~S~~ml~~A~e----rgl---~~~~~~~da~~L--P-fpd~sFDl 350 (697)
...+|||.+||+|.+...++++- .....++|+|+++.+++.|+. +|+ ...+.++|+... | ++...||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45799999999999987776541 124579999999999988875 355 235666776555 3 45678999
Q ss_pred EEecccc-cccc------c--------------c-HHHHHHHHHHhcc-CCeEEEEEeCC
Q 005417 351 LHCARCG-VDWD------Q--------------K-DGILLLEVDRVLK-PGGYFVWTSPL 387 (697)
Q Consensus 351 V~~~~~l-lh~~------~--------------d-~~~~L~El~RvLK-PGG~Lvis~p~ 387 (697)
|+++--. ..|. . + .-.++..+.+.|+ |||++++..|.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 9997321 1110 0 0 1247899999999 99999998874
No 374
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.54 E-value=7.9e-05 Score=71.86 Aligned_cols=134 Identities=12% Similarity=0.175 Sum_probs=69.5
Q ss_pred eEEEecccCchhhhhhhhccC----CCeEEEEeecCCCCCchhhHhccCcccccccccccC------C------------
Q 005417 547 RNVLDMNAHFGGFNSALLEKG----KSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAF------P------------ 604 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~----~~vwvmnv~p~~~~~~l~~i~~RGlig~~~~~~e~f------~------------ 604 (697)
.+|||+|||.|+++.+|.+.- ..|..+-+.|.... .++.-+-.|..+.- +
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccchhhhhhccccccccccchhhH
Confidence 579999999999999998631 23444444442111 11111112222210 0
Q ss_pred -----CCC-CccccccccCccccccC--CCCC---CCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhcCce-e
Q 005417 605 -----TYP-RTYDLVHAEGLLSLESG--HRHR---CSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWD-A 671 (697)
Q Consensus 605 -----typ-rtyDl~H~~~~~~~~~~--~~~~---c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~-~ 671 (697)
.++ .+||+|.++..+..... .... -....+|-++-|+|+|||.+++..- .+...++....... |. +
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~v 174 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQLV 174 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEEE
T ss_pred HHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-HheE
Confidence 023 68999998765432100 0000 0012377889999999999998521 11233344433333 43 3
Q ss_pred EEeeecc---CCCccEEEEEc
Q 005417 672 RVIEIES---NSDERLLICQK 689 (697)
Q Consensus 672 ~~~~~e~---~~~~~~li~~K 689 (697)
....... .+.|..+||++
T Consensus 175 ~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 175 HTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EECCCC-----CCEEEEEEEE
T ss_pred EEECCcccCCcCceEEEEEec
Confidence 3332221 23588889876
No 375
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.54 E-value=1.3e-05 Score=82.85 Aligned_cols=94 Identities=18% Similarity=0.226 Sum_probs=61.0
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----C------cccccccccccCCCCCCcccccccc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G------FVGVLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----G------lig~~~~~~e~f~typrtyDl~H~~ 616 (697)
.|||+|||.|.++.+|.+.+. +|+-+|-. ..+..+-++ | +-=+..|..+ ++. +.+||+|.|+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW-----EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFGTVVIS 157 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC-----CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcCEEEEC
Confidence 799999999999999987432 34444443 444444433 2 1112233332 443 7899999875
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
...-.+. +.-....+|-|+-|+|||||.+++.
T Consensus 158 ~~~~~~~---~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 158 SGSINEL---DEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHHHTTS---CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccccC---CHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3322222 2233567899999999999999996
No 376
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.53 E-value=2.3e-05 Score=76.65 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=57.3
Q ss_pred eEEEecccCchhhhhhhhccCC-CeEEEEeecCCCC-CchhhHh----ccCcc---cc-cccccccCCCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMIL----DRGFV---GV-LHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~-~vwvmnv~p~~~~-~~l~~i~----~RGli---g~-~~~~~e~f~typrtyDl~H~~ 616 (697)
++|||+|||.|.++.+|.+.-. .. .|+-+|-. ..+..+- ..|+- -+ ..|..+.++..+. ||+|.++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 5899999999999999986311 11 22333332 2333222 23442 12 2244444455567 9999875
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.- ......++-++-|+|||||.+++.+
T Consensus 134 ~~---------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD---------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT---------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC---------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 32 2334578889999999999999854
No 377
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.51 E-value=0.0001 Score=79.17 Aligned_cols=137 Identities=14% Similarity=0.128 Sum_probs=85.9
Q ss_pred CCceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHh----ccCc----ccccccccccCCCCCCcccccc
Q 005417 543 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGF----VGVLHDWCEAFPTYPRTYDLVH 614 (697)
Q Consensus 543 ~~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~----~RGl----ig~~~~~~e~f~typrtyDl~H 614 (697)
+....+|+|+|||.|.++.+|++....+- ++-.|-+..+..+- +.|+ -=+-+|..+++| ..||+|.
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p---~~~D~v~ 273 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLR---GTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIP---DGADVYL 273 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC---SSCSEEE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCe---EEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCC---CCceEEE
Confidence 34568999999999999999987421221 22222233333222 2343 223345545544 4799999
Q ss_pred ccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH------------------------HHHHHHHHHHhhcCce
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------------------RLIESARALTTRLKWD 670 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------------------~~~~~~~~~~~~~~W~ 670 (697)
+..++..|.. -....+|-++-|+|+|||+++|.|.. ...++.+++.+.-.|+
T Consensus 274 ~~~vlh~~~d----~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 349 (369)
T 3gwz_A 274 IKHVLHDWDD----DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLR 349 (369)
T ss_dssp EESCGGGSCH----HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEE
T ss_pred hhhhhccCCH----HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCe
Confidence 9999987752 11235899999999999999995421 1145667777777787
Q ss_pred eEEeeeccCCCccEEEEEc
Q 005417 671 ARVIEIESNSDERLLICQK 689 (697)
Q Consensus 671 ~~~~~~e~~~~~~~li~~K 689 (697)
.........+...++.++|
T Consensus 350 ~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 350 VERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEEECSSSSEEEEEEEE
T ss_pred EEEEEECCCCCcEEEEEEe
Confidence 6655321234456777765
No 378
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.51 E-value=5e-05 Score=77.01 Aligned_cols=137 Identities=11% Similarity=0.141 Sum_probs=76.5
Q ss_pred eeEEEecccCchhhhhhhhcc---CCCeEEEEeecCCCCCchhhHhccCcc---cc-cccccccCCCC-----CCccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRGFV---GV-LHDWCEAFPTY-----PRTYDLV 613 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~---~~~vwvmnv~p~~~~~~l~~i~~RGli---g~-~~~~~e~f~ty-----prtyDl~ 613 (697)
-++|||+|||.|.++.+|.+. +..|..+-+-|.-....-..+-..|+- -+ ..|-.+.++.+ +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 468999999999999998862 223444444333222122223333542 12 22333333333 4789999
Q ss_pred cccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH------------HHHHHHHHHHhhc----CceeEEeeec
Q 005417 614 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARALTTRL----KWDARVIEIE 677 (697)
Q Consensus 614 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~~~~~~----~W~~~~~~~e 677 (697)
.++.....+ ..++-++-|+|||||++++.|-. ...+.++++.+.+ ++++.+...
T Consensus 141 ~~d~~~~~~---------~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~- 210 (242)
T 3r3h_A 141 FIDADKTNY---------LNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI- 210 (242)
T ss_dssp EEESCGGGH---------HHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS-
T ss_pred EEcCChHHh---------HHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc-
Confidence 886543333 25777889999999999985321 2223344444433 455554422
Q ss_pred cCCCccEEEEEccccccc
Q 005417 678 SNSDERLLICQKPFFKRQ 695 (697)
Q Consensus 678 ~~~~~~~li~~K~~~~~~ 695 (697)
.+.++|++|+-=+||
T Consensus 211 ---~dG~~~~~k~~~~~~ 225 (242)
T 3r3h_A 211 ---ADGMFLVQPIAENLY 225 (242)
T ss_dssp ---SSCEEEEEEC-----
T ss_pred ---cCceEEEEEcCCCcc
Confidence 377899988765555
No 379
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.50 E-value=3.4e-05 Score=75.96 Aligned_cols=128 Identities=16% Similarity=0.158 Sum_probs=73.6
Q ss_pred eEEEecccCchhhhhhhhccCCC-eEEEEeecCCCC-CchhhHhc----cCccc---c-cccccccCCCCC-----Cccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILD----RGFVG---V-LHDWCEAFPTYP-----RTYD 611 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~-vwvmnv~p~~~~-~~l~~i~~----RGlig---~-~~~~~e~f~typ-----rtyD 611 (697)
.+|||+|||.|.++.+|.+. .+ - -.|+-+|-. ..+..+-+ .|+-. + ..|..+.++..+ .+||
T Consensus 66 ~~vLdiG~G~G~~~~~la~~-~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLA-LPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTT-CCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CEEEEeCCcchHHHHHHHHh-CCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 48999999999999999863 11 1 123333332 33333322 24321 1 223334333333 6899
Q ss_pred cccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH------------HHHHHHHHH----HhhcCceeEEee
Q 005417 612 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARAL----TTRLKWDARVIE 675 (697)
Q Consensus 612 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~------------~~~~~~~~~----~~~~~W~~~~~~ 675 (697)
+|.++..... ...++-++=|+|||||++++.|-. .....++++ ...-+|+.....
T Consensus 143 ~v~~~~~~~~---------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 213 (225)
T 3tr6_A 143 LIYIDADKAN---------TDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIP 213 (225)
T ss_dssp EEEECSCGGG---------HHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEEECCCHHH---------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9997554332 335788888999999999986432 122233333 333456655542
Q ss_pred eccCCCccEEEEEcc
Q 005417 676 IESNSDERLLICQKP 690 (697)
Q Consensus 676 ~e~~~~~~~li~~K~ 690 (697)
. .+.++|++|+
T Consensus 214 ~----~dG~~~~~k~ 224 (225)
T 3tr6_A 214 I----GDGLTLARKK 224 (225)
T ss_dssp S----TTCEEEEEEC
T ss_pred c----CCccEEEEEC
Confidence 1 3678888874
No 380
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.49 E-value=0.00011 Score=68.86 Aligned_cols=110 Identities=8% Similarity=0.058 Sum_probs=76.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc---ccccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl---ig~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++.+|.+... +|+-+|-. ..+..+-++ |+ --+..|+.++++. .+||+|.++..
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~ 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCK-----FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSS-----EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC
T ss_pred CEEEEeCCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc
Confidence 4899999999999999986222 33333432 333333332 33 2233455555554 68999999766
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEc-CHHHHHHHHHHHhhcCceeEEee
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~ 675 (697)
..+..++-++-|+ |||.+++.+ ..+...++.+..+...|++...+
T Consensus 110 ----------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 110 ----------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp ----------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEEE
Confidence 2344788888888 999999986 66778888888888889887764
No 381
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.49 E-value=0.00096 Score=72.24 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=62.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCCCCCCCCccEEEeccccccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 362 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh~~~ 362 (697)
++.+|||+||.+|.++..+++++ ..|+++|+.+ |-.... ....+.+...|+..+..+.+.||+|+|-.+ .
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~-l~~~l~-~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-----~ 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP-MAQSLM-DTGQVTWLREDGFKFRPTRSNISWMVCDMV-----E 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC-CCHHHH-TTTCEEEECSCTTTCCCCSSCEEEEEECCS-----S
T ss_pred CCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh-cChhhc-cCCCeEEEeCccccccCCCCCcCEEEEcCC-----C
Confidence 56899999999999999999986 4689999763 222222 234567778888887777789999999765 3
Q ss_pred cHHHHHHHHHHhccCC
Q 005417 363 KDGILLLEVDRVLKPG 378 (697)
Q Consensus 363 d~~~~L~El~RvLKPG 378 (697)
++...+.-+.+.|..|
T Consensus 281 ~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 281 KPAKVAALMAQWLVNG 296 (375)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred ChHHhHHHHHHHHhcc
Confidence 4555555555555554
No 382
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.48 E-value=0.00035 Score=82.21 Aligned_cols=105 Identities=15% Similarity=0.056 Sum_probs=71.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhcC--CceeEEEEecCCHHHHHHH--HH--------cCCCc-EEEeecccCC-CCCCCCc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKE--LLTMCIANYEASGSQVQLT--LE--------RGLPA-MIGSFASKQL-PYPSLSF 348 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g--~~~~sV~gvD~S~~ml~~A--~e--------rgl~~-~~~~~da~~L-Pfpd~sF 348 (697)
...+|||.|||+|.++..++++. .....++|+|+++.+++.| +. .++.. .+...+.... +.....|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 35799999999999999988763 1235689999999999888 32 12222 3333333332 2345789
Q ss_pred cEEEecccccc-ccc--------------------------c-HHHHHHHHHHhccCCeEEEEEeCC
Q 005417 349 DMLHCARCGVD-WDQ--------------------------K-DGILLLEVDRVLKPGGYFVWTSPL 387 (697)
Q Consensus 349 DlV~~~~~llh-~~~--------------------------d-~~~~L~El~RvLKPGG~Lvis~p~ 387 (697)
|+|+++--... +.. + ...++..+.+.|+|||++++..|.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 99999855211 110 0 123678899999999999999884
No 383
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.48 E-value=8e-05 Score=75.89 Aligned_cols=65 Identities=11% Similarity=0.045 Sum_probs=45.6
Q ss_pred CccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH----------------HHHHHHHHHHhhcCcee
Q 005417 608 RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDA 671 (697)
Q Consensus 608 rtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------------~~~~~~~~~~~~~~W~~ 671 (697)
.+||+|-|+.++..... +.-.+..+|-+|-|+|||||+||+++.. -..++++++...--.++
T Consensus 155 ~~fD~V~~~~~l~~i~~--~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 155 PLADCVLTLLAMECACC--SLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp CCEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEeeehHHHHHhcC--CHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEE
Confidence 58999999998876421 2234457899999999999999998411 13456777776666655
Q ss_pred EEe
Q 005417 672 RVI 674 (697)
Q Consensus 672 ~~~ 674 (697)
...
T Consensus 233 ~~~ 235 (263)
T 2a14_A 233 EQL 235 (263)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 384
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.46 E-value=3e-05 Score=79.16 Aligned_cols=99 Identities=18% Similarity=0.079 Sum_probs=62.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc---cccc-ccccccCCC-CCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVL-HDWCEAFPT-YPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl---ig~~-~~~~e~f~t-yprtyDl~H~~ 616 (697)
.+|||+|||.|.++..|... +. -+|+-+|-. ..+..+-++ |+ +-+. .|..+ ++. -+.+||+|.|.
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~--~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERA--GI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQ 140 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHH--TC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHHC--CC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEEC
Confidence 48999999999999998763 21 134444433 334433332 32 2222 22222 222 24799999998
Q ss_pred Cccccc-cCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 617 GLLSLE-SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 617 ~~~~~~-~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
.++... . +.-....+|-|+-|+|+|||++++...
T Consensus 141 ~~l~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 141 FSFHYAFS---TSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp SCGGGGGS---SHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred chhhhhcC---CHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 877541 1 223455799999999999999998753
No 385
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.46 E-value=2.9e-05 Score=79.85 Aligned_cols=99 Identities=9% Similarity=0.077 Sum_probs=60.0
Q ss_pred EEEecccCchhhhhhhhccC-CCeEEEEeecCCCC-CchhhHhc----cCcccccccccccCCCCC-CccccccccCccc
Q 005417 548 NVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGT-NHLPMILD----RGFVGVLHDWCEAFPTYP-RTYDLVHAEGLLS 620 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~-~~vwvmnv~p~~~~-~~l~~i~~----RGlig~~~~~~e~f~typ-rtyDl~H~~~~~~ 620 (697)
+|||+|||.|.++.+|.+.- .+= .+|+=+|-. .-|..+-+ .|+..-+.-.|.-+..+| ..||+|-+..++.
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~--~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDN--CKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSS--CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCC--CEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 69999999999998887520 110 133444433 44444433 244222222222222233 4699999877765
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
... .-....+|-||-|+|||||.+|+.|
T Consensus 151 ~~~----~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 151 FLE----PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecC----chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 442 1122358999999999999999975
No 386
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.45 E-value=6e-05 Score=77.52 Aligned_cols=85 Identities=15% Similarity=0.111 Sum_probs=55.0
Q ss_pred CccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC----------------HHHHHHHHHHHhhcCcee
Q 005417 608 RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT----------------ARLIESARALTTRLKWDA 671 (697)
Q Consensus 608 rtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~----------------~~~~~~~~~~~~~~~W~~ 671 (697)
.+||+|-|..+|..... +--....+|-|+-|+|||||++++.+. .-..+++++++..-.++.
T Consensus 173 ~~fD~V~~~~~l~~~~~--~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 173 LPADALVSAFCLEAVSP--DLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp SSEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEEEehhhhhhhcC--CHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 67999999988876431 112456899999999999999998521 113567778777777776
Q ss_pred EEeeecc----------CCCccEEEEEcccccc
Q 005417 672 RVIEIES----------NSDERLLICQKPFFKR 694 (697)
Q Consensus 672 ~~~~~e~----------~~~~~~li~~K~~~~~ 694 (697)
....... ..+.-+.|+.|+=|..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (289)
T 2g72_A 251 RDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGLE 283 (289)
T ss_dssp EEEEEEECCGGGCCTTBCCCEEEEEEEEECC--
T ss_pred EEeeEeeccccccccccCcceEEEEEEeccccc
Confidence 5443221 1123356677766654
No 387
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.45 E-value=0.0001 Score=76.06 Aligned_cols=90 Identities=16% Similarity=0.055 Sum_probs=59.6
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHH-------HHHc----C-C--CcEEEeecccC-CCCCCCCcc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQL-------TLER----G-L--PAMIGSFASKQ-LPYPSLSFD 349 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~-------A~er----g-l--~~~~~~~da~~-LPfpd~sFD 349 (697)
.+|||+|||+|..+..++.++. .|+++|.++.+.+. +.+. + + ++.+..+|+.. ++...++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 7899999999999999999853 59999999976433 3211 1 1 35567777655 443234799
Q ss_pred EEEeccccccccccHHHHHHHHHHhccCCe
Q 005417 350 MLHCARCGVDWDQKDGILLLEVDRVLKPGG 379 (697)
Q Consensus 350 lV~~~~~llh~~~d~~~~L~El~RvLKPGG 379 (697)
+|++... ++.. ....++++..++|++.+
T Consensus 167 vV~lDP~-y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPM-FPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCC-CCCC-CC-----HHHHHHHHHS
T ss_pred EEEEcCC-CCCc-ccchHHHHHHHHHHHhh
Confidence 9999866 4433 22357777788888755
No 388
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.44 E-value=7.5e-05 Score=82.02 Aligned_cols=68 Identities=16% Similarity=0.039 Sum_probs=54.6
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc------CC-CcEEEeecccCC-CC-CCCCccEEEec
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------GL-PAMIGSFASKQL-PY-PSLSFDMLHCA 354 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er------gl-~~~~~~~da~~L-Pf-pd~sFDlV~~~ 354 (697)
+.+|||+|||+|..+..|++.+ ..|+++|.++.+++.|+++ ++ ++.+.++|+... +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4799999999999999998874 4799999999999988754 54 466777887663 32 34689999985
No 389
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.44 E-value=3.4e-05 Score=76.30 Aligned_cols=131 Identities=11% Similarity=0.055 Sum_probs=75.4
Q ss_pred eeEEEecccCchhhhhhhhccC-CCeEEEEeecCCCC-CchhhHhc----cCccc----ccccccccCCCCC-----Ccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYP-----RTY 610 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~-~~vwvmnv~p~~~~-~~l~~i~~----RGlig----~~~~~~e~f~typ-----rty 610 (697)
-++|||+|||.|.++..|.+.- ... .|+-+|-. ..+..+-+ .|+-. +..|..+.++..+ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 4689999999999999988620 111 33334433 33433332 24421 2334444455555 689
Q ss_pred ccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-----HHHHHHHHHHHhhcCceeEEeee--ccC-CCc
Q 005417 611 DLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEI--ESN-SDE 682 (697)
Q Consensus 611 Dl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~--e~~-~~~ 682 (697)
|+|.++.....+. ....++-++ |+|||||.+++.|- .+.++.++ ..=.++...... +.. ..+
T Consensus 136 D~V~~d~~~~~~~------~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~d 205 (221)
T 3u81_A 136 DMVFLDHWKDRYL------PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVR---GSSSFECTHYSSYLEYMKVVD 205 (221)
T ss_dssp SEEEECSCGGGHH------HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHH---HCTTEEEEEEEEEETTTTEEE
T ss_pred EEEEEcCCcccch------HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHh---hCCCceEEEcccccccCCCCC
Confidence 9999876555443 112356667 99999999998653 34444443 333566655432 111 135
Q ss_pred cEEEEEc
Q 005417 683 RLLICQK 689 (697)
Q Consensus 683 ~~li~~K 689 (697)
.+.|+.+
T Consensus 206 G~~~~~~ 212 (221)
T 3u81_A 206 GLEKAIY 212 (221)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 6777665
No 390
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.43 E-value=0.00019 Score=72.92 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=78.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc---cc-ccccccccCCCC-CCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTY-PRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl---ig-~~~~~~e~f~ty-prtyDl~H~~ 616 (697)
.+|||+|||.|.++..|.+.. +. +|+-+|-. ..+..+-+ .|+ +- +..|..+..+.+ +.+||+|-++
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~-~~---~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRT-KA---KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTC-CC---EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CEEEEcCCchhHHHHHHHHhc-CC---cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 479999999999999998632 21 45555543 33333322 243 22 223444433333 3799999997
Q ss_pred CccccccC--------------CCCCCCcchhhhhhcccccCCcEEEEEcCHHHHHHHHHHHhhcCceeEE
Q 005417 617 GLLSLESG--------------HRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARV 673 (697)
Q Consensus 617 ~~~~~~~~--------------~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~ 673 (697)
-.|..... ....+.+..++-++-|+|+|||.+++--..+...++..++....|+...
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 65532200 0012456689999999999999999976677778888888888887654
No 391
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.43 E-value=5.9e-05 Score=76.85 Aligned_cols=112 Identities=18% Similarity=0.144 Sum_probs=74.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-cccc-ccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-ig~~-~~~~e~f~typrtyDl~H~~~~~ 619 (697)
.+|||+|||.|.++.++..... +|+-+|-. ..+..+-++ |+ +-++ .|+.+.++ +.+||+|.++.++
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~-----~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG-----KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYA 194 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCH
T ss_pred CEEEEecCCCcHHHHHHHHhCC-----eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcH
Confidence 4799999999999998886322 44444443 444444432 43 2222 23444343 3689999986554
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhcCceeEEe
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~~~~ 674 (697)
.. +..++-++-|+|+|||++++.+- ....+++.++.+...++....
T Consensus 195 ~~---------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 195 EL---------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp HH---------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred HH---------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 33 23688999999999999999742 344677777777777876554
No 392
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.43 E-value=4e-05 Score=76.67 Aligned_cols=95 Identities=21% Similarity=0.231 Sum_probs=60.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-cc-ccccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-ig-~~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
.+|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-++ |+ +- +..|..+ ++ .+.+||+|.|....
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERGY-----EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFST 115 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSG
T ss_pred CEEEEeCCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCc
Confidence 5899999999999999987422 45555554 444444332 32 11 2233333 33 35789999875332
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
..+. +.-....+|-++-|+|+|||.+|+.
T Consensus 116 ~~~~---~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 116 IMYF---DEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGGS---CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC---CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 2222 1123557899999999999999974
No 393
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.43 E-value=3.6e-05 Score=80.24 Aligned_cols=101 Identities=15% Similarity=0.084 Sum_probs=62.8
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC-----------c--cc-ccccccc-----cCCC
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-----------F--VG-VLHDWCE-----AFPT 605 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG-----------l--ig-~~~~~~e-----~f~t 605 (697)
-.+|||+|||.|.++..|.+ .+. -+|+-+|-. ..+..+-+|- . +- +..|..+ +|+.
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~--~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKK--GRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHH--TTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCEEEEECCCCcHHHHHHHh--cCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 35799999999999999986 222 134445543 4444443331 1 11 2222221 2332
Q ss_pred CCCccccccccCccccc-cCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 606 YPRTYDLVHAEGLLSLE-SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 606 yprtyDl~H~~~~~~~~-~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
-+.+||+|-|..++... . +.-....+|-|+-|+|+|||++++...
T Consensus 111 ~~~~fD~V~~~~~l~~~~~---~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFE---SYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TTCCEEEEEEETCGGGGGG---SHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccC---CHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 23589999998776443 2 222345789999999999999999743
No 394
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.43 E-value=0.00012 Score=72.33 Aligned_cols=121 Identities=11% Similarity=0.068 Sum_probs=72.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--cc-ccccccccCCC-C-CCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPT-Y-PRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig-~~~~~~e~f~t-y-prtyDl~H~~ 616 (697)
..|||+|||.|.|+.+|... .|- .+|+-+|-. .-+..+.+ .|+ +- +..|..+ ++. + +.+||.|++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~-~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQ-NPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHH-CTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE
T ss_pred ceEEEEecCCCHHHHHHHHH-CCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE
Confidence 35999999999999999863 221 245555544 44444433 354 22 2233332 221 2 3789998763
Q ss_pred CccccccC---CCCCCCcchhhhhhcccccCCcEEEEE-cCHHHHHHHHHHHhhcCceeE
Q 005417 617 GLLSLESG---HRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDAR 672 (697)
Q Consensus 617 ~~~~~~~~---~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~ 672 (697)
.. ..|.. ...+-....+|-|+-|+|+|||.+++. |.....+.+.++.....|+..
T Consensus 116 ~~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 FS-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp SC-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CC-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 22 11210 002223457899999999999999986 566666676666666566544
No 395
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.42 E-value=3.2e-05 Score=74.87 Aligned_cols=96 Identities=19% Similarity=0.157 Sum_probs=59.3
Q ss_pred eEEEecccCchhhhh-hhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc-cc-ccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNS-ALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faa-al~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl-ig-~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.+++ .+.. ... +|+-+|.. ..+..+-++ |. +- +..|.. .++.-+.+||+|.|..+
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~--~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVE--DGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHH--TTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSC
T ss_pred CEEEEECCCCCHHHHHHHHh--CCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcCh
Confidence 589999999999854 4433 222 44444443 334333332 21 11 122322 23322379999999887
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+.+.. .-....+|-|+-|+|+|||++++.+
T Consensus 99 l~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 99 IFHMR----KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGGSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhCC----HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 76542 1235578999999999999999864
No 396
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.41 E-value=0.00015 Score=77.12 Aligned_cols=98 Identities=16% Similarity=0.237 Sum_probs=63.1
Q ss_pred ceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhcc----Cccc----ccccccccCCCCCCcccccccc
Q 005417 545 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 545 ~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~R----Glig----~~~~~~e~f~typrtyDl~H~~ 616 (697)
...+|||+|||.|.++.+|.+....+ .++-.|-+..+..+-++ |+-+ +-+|..+. .+|. +|+|.+.
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v~~~ 263 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPEL---DSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAVLFC 263 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTC---EEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCC---eEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEEEEe
Confidence 45799999999999999998742122 22222333344443332 5422 23444332 2233 4999999
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.++..+. + -....+|-++-|+|+|||.++|-|
T Consensus 264 ~vlh~~~---d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 264 RILYSAN---E-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SCGGGSC---H-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred chhccCC---H-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9988775 1 224568999999999999998865
No 397
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.40 E-value=0.00098 Score=66.42 Aligned_cols=92 Identities=10% Similarity=-0.046 Sum_probs=64.1
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH----cCC----CcEEEeecccC---------------
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE----RGL----PAMIGSFASKQ--------------- 340 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~e----rgl----~~~~~~~da~~--------------- 340 (697)
.++||||||| ..|..+++. . ...|+.+|.+++..+.|++ .++ ++.+..+++..
T Consensus 31 a~~VLEiGtG--ySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCEEEEECch--HHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 4799999985 677777764 1 4679999999999988764 244 34555555432
Q ss_pred CC--------C-CCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEe
Q 005417 341 LP--------Y-PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 385 (697)
Q Consensus 341 LP--------f-pd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~ 385 (697)
++ . ..++||+|+.-.- .....+..+.+.|+|||++++..
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEEeC
Confidence 22 2 2368999997642 22356667779999999997743
No 398
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.39 E-value=0.00023 Score=75.52 Aligned_cols=136 Identities=22% Similarity=0.261 Sum_probs=84.3
Q ss_pred ceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc----cCc----ccccccccccCCCCCCcccccccc
Q 005417 545 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGF----VGVLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 545 ~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~----RGl----ig~~~~~~e~f~typrtyDl~H~~ 616 (697)
.-.+|||+|||.|.++.+|.+....+-+ +-.|-+..+..+-+ .|+ -=+-+|+.+++ |..||+|.+.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~---~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v~~~ 256 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSA---TVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---PRKADAIILS 256 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SSCEEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEE---EEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---CCCccEEEEc
Confidence 3568999999999999999874223322 22232333433332 333 22344555544 4569999999
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH--------H------------------HHHHHHHHHhhcCce
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------R------------------LIESARALTTRLKWD 670 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~--------~------------------~~~~~~~~~~~~~W~ 670 (697)
.++..+.. . ....+|-++-|+|+|||++++.|.. . ..++++++++.-.++
T Consensus 257 ~vl~~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (360)
T 1tw3_A 257 FVLLNWPD--H--DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLV 332 (360)
T ss_dssp SCGGGSCH--H--HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred ccccCCCH--H--HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCe
Confidence 99877651 1 1236899999999999999987533 0 134566677777777
Q ss_pred eEEeeeccCC----CccEEEEEcc
Q 005417 671 ARVIEIESNS----DERLLICQKP 690 (697)
Q Consensus 671 ~~~~~~e~~~----~~~~li~~K~ 690 (697)
......-.+. ...+++++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 333 VEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEEEeCCCCcccCccEEEEEEeC
Confidence 6544322221 1567888775
No 399
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.39 E-value=6.7e-05 Score=80.20 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=60.5
Q ss_pred eEEEecccCchhhhhhhhccCC-CeEEEEeecCCCCCchhh----HhccCc---ccccccccccCCCCC-CccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGTNHLPM----ILDRGF---VGVLHDWCEAFPTYP-RTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~-~vwvmnv~p~~~~~~l~~----i~~RGl---ig~~~~~~e~f~typ-rtyDl~H~~~ 617 (697)
.+|||+|||.|.++..|.+.+. .|.. +|....+.. +-+.|+ |-+++.=.+.++ +| .+||+|.+..
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~g-----vD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIG-----IECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEW 141 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEE-----EECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECC
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEE-----ECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEcc
Confidence 5799999999999999987421 2332 232222322 333455 233332223332 34 8999999976
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEE
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 650 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 650 (697)
+..... ..-.+..++-+++|+|+|||.+|.
T Consensus 142 ~~~~l~---~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 142 MGYCLF---YESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CBBTBT---BTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccc---CchhHHHHHHHHHHhCCCCCEEcc
Confidence 544443 334566789999999999999974
No 400
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.38 E-value=0.00013 Score=71.30 Aligned_cols=133 Identities=12% Similarity=0.135 Sum_probs=71.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhccCcccccccccccC------CCCC----Ccccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAF------PTYP----RTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~RGlig~~~~~~e~f------~typ----rtyDl~H~~ 616 (697)
.+|||+|||.|+|+..|.+.+..|+-+-+.|..... |+--+-.|..+.- ..++ .+||+|-++
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~--------~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd 98 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIA--------GVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSD 98 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCT--------TCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCC--------CeEEEEccccCHHHHHHHHHHhhcccCCcceEEecC
Confidence 589999999999999998743345555555532211 2222223332210 0011 379999886
Q ss_pred Ccccccc---C--CCCCCCcchhhhhhcccccCCcEEEEEc--CHHHHHHHHHHHhhcCce-eEEeeec---cCCCccEE
Q 005417 617 GLLSLES---G--HRHRCSTLDIFTEIDRILRPEGWVIIRD--TARLIESARALTTRLKWD-ARVIEIE---SNSDERLL 685 (697)
Q Consensus 617 ~~~~~~~---~--~~~~c~~~~~l~E~dRiLRP~G~~i~~d--~~~~~~~~~~~~~~~~W~-~~~~~~e---~~~~~~~l 685 (697)
....... . .........+|-++-|+|||||.|++.- ... ...+....+.. ++ +.+.... +.+.|-.+
T Consensus 99 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~-~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 99 AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM-TNDFIAIWRKN-FSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH-HHHHHHHHGGG-EEEEEEECC------CCEEEE
T ss_pred CCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC-HHHHHHHHHHh-cCEEEEECCCCccCCCceEEE
Confidence 5321100 0 0000112357778899999999999752 222 23444444443 33 3333222 23468888
Q ss_pred EEEc
Q 005417 686 ICQK 689 (697)
Q Consensus 686 i~~K 689 (697)
||++
T Consensus 177 v~~~ 180 (191)
T 3dou_A 177 MFFG 180 (191)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8875
No 401
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.38 E-value=0.00014 Score=78.58 Aligned_cols=97 Identities=19% Similarity=0.202 Sum_probs=60.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhh----HhccCc---ccccccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGVLHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~----i~~RGl---ig~~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
.+|||+|||.|.++..|.+.+. . .|+-+|....+.. +-+.|+ |-+++.=.+.++ +|..||+|.+..+.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~-~---~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGA-R---KVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS-LPEKVDVIISEWMG 139 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC-S---EEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CSSCEEEEEECCCB
T ss_pred CEEEEeccCcCHHHHHHHhcCC-C---EEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-cCCcceEEEEcChh
Confidence 5799999999999998887422 1 2333333333332 333454 333332233333 35899999996543
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
.... ..-.+..++-+++|+|+|||.+|+.
T Consensus 140 ~~l~---~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 140 YFLL---RESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TTBT---TTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hccc---chHHHHHHHHHHHhhCCCCeEEEEe
Confidence 3332 2234557899999999999999864
No 402
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.38 E-value=6.3e-05 Score=79.03 Aligned_cols=98 Identities=12% Similarity=0.107 Sum_probs=61.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc------------cccccccc--c----cC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF------------VGVLHDWC--E----AF 603 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl------------ig~~~~~~--e----~f 603 (697)
..|||+|||.|+....++. .... +|+=+|-. .-|..+-+| |+ ++..+.-+ + +|
T Consensus 50 ~~VLDlGCG~G~~l~~~~~--~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFY--GEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CEEEETTCTTTTTHHHHHH--TTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CeEEEEecCCcHhHHHHHh--cCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 4799999999997777664 2222 45555654 555555544 21 11111111 2 23
Q ss_pred CCCCCccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 604 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 604 ~typrtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
+ +.+||+|-|..++...- +.-....+|-||-|+|||||+||+...
T Consensus 126 ~--~~~FD~V~~~~~lhy~~---~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 Y--FGKFNIIDWQFAIHYSF---HPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp C--SSCEEEEEEESCGGGTC---STTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c--CCCeeEEEECchHHHhC---CHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3 37999999876653211 111346899999999999999999753
No 403
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.38 E-value=0.00014 Score=74.97 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=63.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhc-------CCc----eeEEEEecCCH---HHHHHH-----------HHc----------
Q 005417 283 GVRTILDIGCGYGSFGAHLFSK-------ELL----TMCIANYEASG---SQVQLT-----------LER---------- 327 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~-------g~~----~~sV~gvD~S~---~ml~~A-----------~er---------- 327 (697)
...+|||||+|+|..+..+++. +.. ...++++|..+ +++..+ ++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999988776543 211 36788888765 555433 211
Q ss_pred ---------CCCcEEEeecccC-CCCCC----CCccEEEecccccccccc--HHHHHHHHHHhccCCeEEEE
Q 005417 328 ---------GLPAMIGSFASKQ-LPYPS----LSFDMLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVW 383 (697)
Q Consensus 328 ---------gl~~~~~~~da~~-LPfpd----~sFDlV~~~~~llh~~~d--~~~~L~El~RvLKPGG~Lvi 383 (697)
...+.+..+|+.. ++.-+ ..||+|+.-...-.-.++ ...+|.++.++|||||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0123355566554 44322 279999975321111122 25799999999999999885
No 404
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.37 E-value=0.00053 Score=71.92 Aligned_cols=102 Identities=17% Similarity=0.181 Sum_probs=65.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHH---HcCCCcEEEeecccCCCCCCCCccEEEecccccc
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTL---ERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~---ergl~~~~~~~da~~LPfpd~sFDlV~~~~~llh 359 (697)
+..+|||+||++|.++..++++. ...++.++|+...+..... ..+.++........-..+..+.||+|+|-.+ .+
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-Pn 158 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-ES 158 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc-CC
Confidence 45899999999999999999762 3557889998753211000 0011222222122223355678999999755 44
Q ss_pred ccccH-------HHHHHHHHHhccCC-eEEEEEeCC
Q 005417 360 WDQKD-------GILLLEVDRVLKPG-GYFVWTSPL 387 (697)
Q Consensus 360 ~~~d~-------~~~L~El~RvLKPG-G~Lvis~p~ 387 (697)
.... ..+|.-+.++|+|| |.|++-.+-
T Consensus 159 -sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 159 -SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 2221 13566678899999 999998775
No 405
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.36 E-value=0.00012 Score=76.79 Aligned_cols=132 Identities=15% Similarity=0.159 Sum_probs=83.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhcc----C----cccccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR----G----FVGVLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~R----G----lig~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|+|+|||.|.++.+|.+. .|-. .++-.|-+..+..+-++ | +--+-+|..++ +|..||+|.+..+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~-~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQA-EPSA--RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE---VPSNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHH-CTTC--EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTC---CCSSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHH-CCCC--EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCC---CCCCCCEEEEchh
Confidence 89999999999999999863 2211 23333333444433332 2 22234455553 4678999999999
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-------------H------------HHHHHHHHHhhcCceeEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------R------------LIESARALTTRLKWDARV 673 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------------~------------~~~~~~~~~~~~~W~~~~ 673 (697)
+..|.. . ....+|-++-|+|+|||+++|.|.. + ..++++++++.-.++...
T Consensus 243 l~~~~~--~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 318 (334)
T 2ip2_A 243 IGDLDE--A--ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVER 318 (334)
T ss_dssp GGGCCH--H--HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred ccCCCH--H--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeE
Confidence 987752 2 2247899999999999999997421 0 134556666666676544
Q ss_pred eeeccCCCccEEEEEc
Q 005417 674 IEIESNSDERLLICQK 689 (697)
Q Consensus 674 ~~~e~~~~~~~li~~K 689 (697)
... .++...+++++|
T Consensus 319 ~~~-~~~~~~~i~~~~ 333 (334)
T 2ip2_A 319 IVD-LPMETRMIVAAR 333 (334)
T ss_dssp EEE-ETTTEEEEEEEE
T ss_pred EEE-CCCCCEEEEEEe
Confidence 322 223456777776
No 406
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.35 E-value=5.2e-05 Score=80.23 Aligned_cols=135 Identities=12% Similarity=0.048 Sum_probs=85.0
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc----cCcc----cccccccccCCCCCCccccccccC
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~----RGli----g~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.++|+|+|||.|.++.+|++....+-+ +-.|-+..+..+-+ .|+- -+-+|..+.-+..|..||+|.+.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~---~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTG---QIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEE---EEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeE---EEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 789999999999999999863212222 22233333333322 3442 233344333212467899999999
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC--------H-------------------HHHHHHHHHHhhcCce
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------A-------------------RLIESARALTTRLKWD 670 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~--------~-------------------~~~~~~~~~~~~~~W~ 670 (697)
++..|.. -....+|-++-|+|+|||.++|.|. . ...++++++++.-.++
T Consensus 257 vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (352)
T 3mcz_A 257 CLHYFDA----REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLA 332 (352)
T ss_dssp CGGGSCH----HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCE
T ss_pred ccccCCH----HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCc
Confidence 9987752 1234789999999999999999641 0 0134456666666676
Q ss_pred eEEeeeccCCCccEEEEEcc
Q 005417 671 ARVIEIESNSDERLLICQKP 690 (697)
Q Consensus 671 ~~~~~~e~~~~~~~li~~K~ 690 (697)
..... .+...+++++|+
T Consensus 333 ~~~~~---~g~~~l~~a~kp 349 (352)
T 3mcz_A 333 VGERS---IGRYTLLIGQRS 349 (352)
T ss_dssp EEEEE---ETTEEEEEEECC
T ss_pred eeeec---cCceEEEEEecC
Confidence 65431 124678889986
No 407
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.35 E-value=0.00014 Score=73.36 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=65.9
Q ss_pred eEEEecccCchhhhhhhhcc------CCCeEEEEeecCCCCCchhhHhccCccccccccccc--CCCCCC-ccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEK------GKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEA--FPTYPR-TYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~------~~~vwvmnv~p~~~~~~l~~i~~RGlig~~~~~~e~--f~typr-tyDl~H~~~ 617 (697)
.+|||+|||.|..++.|.+. +..|..+-+.|.-.. ... -+...+-=+..|..+. ++..+. +||+|+++.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~-~a~-~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQ-IPA-SDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCC-CCG-GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHH-HHh-ccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 48999999999999998763 233444443332211 110 0111121123344432 232223 699999754
Q ss_pred ccccccCCCCCCCcchhhhhhcc-cccCCcEEEEEcCHHH-----HHHHHHHHhhc--Ccee
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDR-ILRPEGWVIIRDTARL-----IESARALTTRL--KWDA 671 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dR-iLRP~G~~i~~d~~~~-----~~~~~~~~~~~--~W~~ 671 (697)
. + -....+|-|+-| +|||||++++.|.... -+.+.++.+.. .++.
T Consensus 161 ~----~-----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 161 A----H-----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp S----C-----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred c----h-----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 3 1 144578999998 9999999999764211 13566666666 4554
No 408
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.34 E-value=2.8e-05 Score=77.54 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=59.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc---cc-ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl---ig-~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|+++.+|.+.. ..|+-+|-. ..+..+-+ .|+ +- +..|..+.. -+.+||+|.++.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~ 152 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG-----MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSP 152 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT-----CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECC
T ss_pred CEEEECccccCHHHHHHHHcC-----CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECC
Confidence 479999999999999999743 234444433 33333322 243 11 223333322 236899999988
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.|.... .....+.|+-|+|+|||++|+..
T Consensus 153 ~~~~~~------~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 153 PWGGPD------YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCSSGG------GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CcCCcc------hhhhHHHHHHhhcCCcceeHHHH
Confidence 777644 11236779999999999988754
No 409
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.34 E-value=7.5e-05 Score=78.71 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=74.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----CcccccccccccCCCC-CCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTY-PRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig~~~~~~e~f~ty-prtyDl~H~~~~~~ 620 (697)
..|||+|||.|+++|.++..... -.|+-+|-. ..+..+-++ |+ .-+.-.|.-...+ +.+||+|..+..-
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~g---a~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~- 198 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYG---MRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA- 198 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTC---CEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC-
T ss_pred CEEEEECCCccHHHHHHHHHccC---CEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc-
Confidence 58999999999998776542112 234444443 455444433 65 2222122212222 3899999874431
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEcCHHHHH----HH-HHHHhhcCceeEEeeeccCC-CccEEEEEcc
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIE----SA-RALTTRLKWDARVIEIESNS-DERLLICQKP 690 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~----~~-~~~~~~~~W~~~~~~~e~~~-~~~~li~~K~ 690 (697)
-....++-|+-|+|||||.+++++....-. .+ ..+.+ .|+.....+..+. .+.|.+++|.
T Consensus 199 --------~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 199 --------EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp --------SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTTCCCEEEEEEEC
T ss_pred --------cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCCcCcEEEEEEcc
Confidence 123479999999999999999997532210 00 01222 5776665544443 3567777763
No 410
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.32 E-value=5.2e-05 Score=78.69 Aligned_cols=47 Identities=23% Similarity=0.282 Sum_probs=33.9
Q ss_pred CCCccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 606 YPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 606 yprtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.+.+||+|.|..++...+-......+..+|-++-|+|||||++|+..
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 34899999998886332100012345679999999999999999964
No 411
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.32 E-value=0.00012 Score=73.43 Aligned_cols=106 Identities=15% Similarity=0.177 Sum_probs=70.7
Q ss_pred eEEEecccCchhhhhhhhcc-CCCeEEEEeecCCCC-CchhhHhcc----Ccc----cccccccccCCCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR----GFV----GVLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~-~~~vwvmnv~p~~~~-~~l~~i~~R----Gli----g~~~~~~e~f~typrtyDl~H~~ 616 (697)
.+|||+|||.|.++.+|.+. .... .|+-+|-. ..+..+-++ |+- -+..|..+.|+. .+||+|-++
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~v~~~ 169 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE--ENVDHVILD 169 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC--CSEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC--CCcCEEEEC
Confidence 47999999999999999873 1011 23333443 444444443 542 245567777664 789999872
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEc-CHHHHHHHHHHHhhcC
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLK 668 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~ 668 (697)
--....++-++-|+|+|||.+++.. ..+..+++.+.++...
T Consensus 170 -----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----------LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----------CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 1223468999999999999999875 4556666666666655
No 412
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.32 E-value=0.00022 Score=74.48 Aligned_cols=135 Identities=18% Similarity=0.205 Sum_probs=83.2
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc----cCccc----ccccccccCCCCCCccccccccC
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFVG----VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~----RGlig----~~~~~~e~f~typrtyDl~H~~~ 617 (697)
-.+|+|+|||.|.++.+|.+. .|-. .++-.|-+..+..+-+ .|+-+ +-+|..+. .+|..||+|.+..
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~-~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~~ 240 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQH-NPNA--EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLLPN 240 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHH-CTTC--EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEEES
T ss_pred CCEEEEECCCcCHHHHHHHHH-CCCC--eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEEcc
Confidence 468999999999999999873 2211 2333333323333322 24322 22333331 3455699999999
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH----------H-----------------HHHHHHHHHhhcCce
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------R-----------------LIESARALTTRLKWD 670 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~----------~-----------------~~~~~~~~~~~~~W~ 670 (697)
++..+.. -....+|-++-|+|+|||++++.|.. . ..++++++++.-.++
T Consensus 241 ~l~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 241 FLHHFDV----ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp CGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred hhccCCH----HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 9887741 12347899999999999999985421 0 145667777777777
Q ss_pred eEEeeeccCCCccEEEEEcc
Q 005417 671 ARVIEIESNSDERLLICQKP 690 (697)
Q Consensus 671 ~~~~~~e~~~~~~~li~~K~ 690 (697)
...... ..+...++++++|
T Consensus 317 ~~~~~~-~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 317 HSQLHS-LPTTQQQVIVAYK 335 (335)
T ss_dssp EEEEEC-CTTSSSEEEEEEC
T ss_pred eeeEEE-CCCCceeEEEecC
Confidence 554422 2223567777664
No 413
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.30 E-value=0.00012 Score=74.50 Aligned_cols=131 Identities=14% Similarity=0.103 Sum_probs=80.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--ccccccccccCC---CCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFP---TYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig~~~~~~e~f~---typrtyDl~H~~ 616 (697)
.+|||+|||.|.++..|... .+- ..|+-+|.. ..+.++-+ -|+ |-+++.--+.++ .++.+||+|-+.
T Consensus 82 ~~vLDiG~G~G~~~i~la~~-~~~--~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 82 LRVLDLGTGAGFPGLPLKIV-RPE--LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CEEEEETCTTTTTHHHHHHH-CTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CEEEEEcCCCCHHHHHHHHH-CCC--CEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 57999999999988877642 121 133444433 33333322 355 444444444444 345799999874
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEc---CHHHHHHHHHHHhhcCceeEEeeec---cCCCc-cEEEEEc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD---TARLIESARALTTRLKWDARVIEIE---SNSDE-RLLICQK 689 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d---~~~~~~~~~~~~~~~~W~~~~~~~e---~~~~~-~~li~~K 689 (697)
.+ ..+..++-++-|+|+|||.+++-. ..+.+.+++..++.+.|+......- ....+ .+++.+|
T Consensus 159 a~----------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 159 AV----------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEK 228 (249)
T ss_dssp SS----------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred Cc----------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence 32 234578888999999999988743 3566777777777788876543221 12233 4555566
Q ss_pred c
Q 005417 690 P 690 (697)
Q Consensus 690 ~ 690 (697)
.
T Consensus 229 ~ 229 (249)
T 3g89_A 229 T 229 (249)
T ss_dssp C
T ss_pred C
Confidence 4
No 414
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.29 E-value=0.00028 Score=69.30 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=71.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcc---c-ccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGli---g-~~~~~~e~f~typrtyDl~H~~~ 617 (697)
..|||+|||.|.++.+|..... .|+-+|-. ..+..+-+ .|+- - +..|..+.++.. ..||+|-+..
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~-----~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~ 130 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGG-----RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGG 130 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECS
T ss_pred CEEEEecCCCCHHHHHHHHcCC-----EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECC
Confidence 5799999999999999987422 33444433 44444333 2442 1 223333333332 3699987643
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc-CHHHHHHHHHHHhhcCceeEEe
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 674 (697)
.+ ... ++-++-|+|||||.+++.. ..+...++.++.+...+++...
T Consensus 131 ~~----------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 131 GG----------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp CC----------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEEE
T ss_pred cc----------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEEE
Confidence 21 334 8899999999999999975 4566777777777777766544
No 415
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.28 E-value=0.0002 Score=71.46 Aligned_cols=119 Identities=12% Similarity=0.086 Sum_probs=69.2
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhH----hccCccc---cccccccc----CCCCCCccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI----LDRGFVG---VLHDWCEA----FPTYPRTYDLV 613 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i----~~RGlig---~~~~~~e~----f~typrtyDl~ 613 (697)
-..|||+|||.|.++.+|.+..... +|+-+|-. ..+..+ -+.|+-. +.+|-.+. |+ +.+||+|
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~---~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~--~~~~d~v 109 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQ---DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIP--DNSLRMV 109 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSC--TTCEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCC---eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcC--CCChheE
Confidence 3579999999999999998632232 34444443 434333 2345421 22332222 44 3899999
Q ss_pred cccCccccccCC---CCCCCcchhhhhhcccccCCcEEEEE-cCHHHHHHHHHHHhhc-Cce
Q 005417 614 HAEGLLSLESGH---RHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRL-KWD 670 (697)
Q Consensus 614 H~~~~~~~~~~~---~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~-~W~ 670 (697)
++.... .|... ..|-.-..++-|+-|+|||||++++. |.....+.+.++.... .|+
T Consensus 110 ~~~~~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~ 170 (218)
T 3dxy_A 110 QLFFPD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYK 170 (218)
T ss_dssp EEESCC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE
T ss_pred EEeCCC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcc
Confidence 975221 12200 01112235889999999999999986 5555566666655432 344
No 416
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.28 E-value=8.4e-05 Score=72.88 Aligned_cols=120 Identities=11% Similarity=0.040 Sum_probs=73.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-Cc--------------ccccccccccCCCCC---
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GF--------------VGVLHDWCEAFPTYP--- 607 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-Gl--------------ig~~~~~~e~f~typ--- 607 (697)
..|||+|||.|.++..|.+.+. .|+=+|-. .-|..+.+| ++ ..-..-.|.-+...|
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~-----~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY-----HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC-----EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC-----eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 3699999999999999987432 45555544 455555544 11 011111222232333
Q ss_pred -CccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEE-E-EcCH----------HHHHHHHHHHhhcCceeEEe
Q 005417 608 -RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVI-I-RDTA----------RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 608 -rtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i-~-~d~~----------~~~~~~~~~~~~~~W~~~~~ 674 (697)
.+||+|-+..+|.+.. ......++-||-|+|||||.++ + -+-. -..++++.+... .|++...
T Consensus 99 ~~~fD~v~~~~~l~~l~----~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALP----ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HHSEEEEEEESCGGGSC----HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred CCCEEEEEECcchhhCC----HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 6899999877776553 1233457899999999999833 2 2210 125677777777 7887655
Q ss_pred ee
Q 005417 675 EI 676 (697)
Q Consensus 675 ~~ 676 (697)
+.
T Consensus 174 ~~ 175 (203)
T 1pjz_A 174 GG 175 (203)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 417
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.27 E-value=0.0003 Score=74.13 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=54.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhH-hc-cCc--ccccccccccCCCCCCccccccccCcccc-
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMI-LD-RGF--VGVLHDWCEAFPTYPRTYDLVHAEGLLSL- 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i-~~-RGl--ig~~~~~~e~f~typrtyDl~H~~~~~~~- 621 (697)
..|||+|||.|+|+..|.+. ..|.-+-+....++..+..+ .+ .|. +-+... ...+..-+.+||+|.|+..++.
T Consensus 84 ~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccccC
Confidence 58999999999999999874 34544433111111111100 01 111 111111 0111111368999999876641
Q ss_pred -ccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 622 -ESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 622 -~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
+.. +.-....+|-++-|+|||||.|++.
T Consensus 162 ~~~~--d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 162 NPTV--EAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp SHHH--HHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cchh--hHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 100 0000114688899999999999985
No 418
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.27 E-value=5.9e-05 Score=75.23 Aligned_cols=97 Identities=9% Similarity=-0.081 Sum_probs=61.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccC----ccccccccccc-CC-CCC--CccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEA-FP-TYP--RTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RG----lig~~~~~~e~-f~-typ--rtyDl~H~~~ 617 (697)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++- +--+..|..+. ++ .|+ ..||+|.+..
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP-----RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS-----CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CeEEEEcCCCCHHHHHHHHhCC-----CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 4699999999999999987432 44555543 4454444432 11112222220 00 111 2399999988
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
++.... .-....+|-|+-|+|+|||++++.+
T Consensus 133 ~~~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 133 GFHHIP----VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSTTSC----GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhcCC----HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 887653 2345689999999999999988764
No 419
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.27 E-value=0.00029 Score=72.72 Aligned_cols=136 Identities=10% Similarity=0.056 Sum_probs=72.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCC--C-CchhhHhcc--Ccccc--cccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIG--T-NHLPMILDR--GFVGV--LHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~--~-~~l~~i~~R--Glig~--~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
..|||+|||.|+|+..|.+. ..|.-+-+.|.-. + +.+. .-.. ++.-+ -.|-.+ ++ +.+||+|-|+..+
T Consensus 76 ~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~~~~-~~~~~~~v~~~~~~~D~~~-l~--~~~fD~V~sd~~~ 150 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEVPRI-TESYGWNIVKFKSRVDIHT-LP--VERTDVIMCDVGE 150 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCCCCC-CCBTTGGGEEEECSCCTTT-SC--CCCCSEEEECCCC
T ss_pred CEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhhhhh-hhccCCCeEEEecccCHhH-CC--CCCCcEEEEeCcc
Confidence 58999999999999999874 5677766666311 1 1110 0001 11111 122222 44 5899999997552
Q ss_pred ccccCCCC-CCCcchhhhhhcccccCCc--EEEEE----cCHHHHHHHHHHHhhcCceeEEeeec--cCCCccEEEEEc
Q 005417 620 SLESGHRH-RCSTLDIFTEIDRILRPEG--WVIIR----DTARLIESARALTTRLKWDARVIEIE--SNSDERLLICQK 689 (697)
Q Consensus 620 ~~~~~~~~-~c~~~~~l~E~dRiLRP~G--~~i~~----d~~~~~~~~~~~~~~~~W~~~~~~~e--~~~~~~~li~~K 689 (697)
..-....+ .-.+ .+|-++.|+|+||| .|++. +..++++.++.+..... .+.+...- +.+.|-.+||.+
T Consensus 151 ~~~~~~~d~~~~l-~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~~ 227 (265)
T 2oxt_A 151 SSPKWSVESERTI-KILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSRA 227 (265)
T ss_dssp CCSCHHHHHHHHH-HHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred cCCccchhHHHHH-HHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEecC
Confidence 11000000 0001 26778999999999 99985 33434455554444322 33333311 233566666643
No 420
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.23 E-value=7.9e-05 Score=74.64 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=72.5
Q ss_pred eEEEecccCchhhhhhhhccCC-CeEEEEeecCCCC-CchhhHhc----cCccc----ccccccccCCCCC-----Cccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYP-----RTYD 611 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~-~vwvmnv~p~~~~-~~l~~i~~----RGlig----~~~~~~e~f~typ-----rtyD 611 (697)
++|||+|||.|.++.+|.+.-. .. .|+-+|-. ..+.++-+ .|+-. +..|..+.++.+| .+||
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDG---QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 5899999999999999986311 11 22333322 33333322 24421 1223222222222 6799
Q ss_pred cccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC------------HHHHHHHHHHH----hhcCceeEEee
Q 005417 612 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARALT----TRLKWDARVIE 675 (697)
Q Consensus 612 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~~~~----~~~~W~~~~~~ 675 (697)
+|.++..... ...++-++-|+|||||++++.+. ......++++. ..-+++.....
T Consensus 151 ~V~~d~~~~~---------~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 221 (232)
T 3cbg_A 151 LIFIDADKRN---------YPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIP 221 (232)
T ss_dssp EEEECSCGGG---------HHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred EEEECCCHHH---------HHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEE
Confidence 9988654322 33678888999999999999532 12333444443 33456655543
Q ss_pred eccCCCccEEEEEcc
Q 005417 676 IESNSDERLLICQKP 690 (697)
Q Consensus 676 ~e~~~~~~~li~~K~ 690 (697)
+ .+.+.+++|.
T Consensus 222 ~----~dG~~~~~~~ 232 (232)
T 3cbg_A 222 L----GDGMTLALKK 232 (232)
T ss_dssp S----BTCEEEEEEC
T ss_pred c----CCeEEEEEeC
Confidence 2 2568888774
No 421
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.22 E-value=9.8e-05 Score=73.86 Aligned_cols=134 Identities=13% Similarity=0.108 Sum_probs=76.0
Q ss_pred EEEecccCchhhhhhhhcc-CCCeEEEEeecCCCC-CchhhH----hccCcc-c---c-cccccccCCCC-CCccccccc
Q 005417 548 NVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMI----LDRGFV-G---V-LHDWCEAFPTY-PRTYDLVHA 615 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~-~~~vwvmnv~p~~~~-~~l~~i----~~RGli-g---~-~~~~~e~f~ty-prtyDl~H~ 615 (697)
+|||+|||.|.++.+|.+. ...- .|+-+|-. ..+.++ -+.|+- . + ..|-.+..+.+ +.+||+|.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 8999999999999988752 0011 22333332 223222 122332 1 1 12222333344 478999987
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC------------HHHHHHHHHHHhhcCceeEEeeeccCCCcc
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARALTTRLKWDARVIEIESNSDER 683 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~ 683 (697)
+..... ...++-++-|+|||||++++.|- ......++++.+.++++-.+.-+----.+.
T Consensus 136 d~~~~~---------~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG 206 (221)
T 3dr5_A 136 QVSPMD---------LKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAG 206 (221)
T ss_dssp CCCTTT---------HHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTC
T ss_pred cCcHHH---------HHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccch
Confidence 643332 23578888999999999998422 123345666666666652221111111478
Q ss_pred EEEEEccccc
Q 005417 684 LLICQKPFFK 693 (697)
Q Consensus 684 ~li~~K~~~~ 693 (697)
++|+.|+.-.
T Consensus 207 l~~~~~~~~~ 216 (221)
T 3dr5_A 207 LTVVTKALEH 216 (221)
T ss_dssp EEEEEECCCC
T ss_pred HHHHHHHHHh
Confidence 9999998643
No 422
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.21 E-value=0.00015 Score=74.23 Aligned_cols=120 Identities=14% Similarity=0.064 Sum_probs=74.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-Cc-------------------ccccccccccCCC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GF-------------------VGVLHDWCEAFPT 605 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-Gl-------------------ig~~~~~~e~f~t 605 (697)
..|||+|||.|.++..|.+.+. +|+-+|-. .-+..+.++ ++ -.-+.-.|--+..
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~-----~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH-----TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC-----EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CeEEEeCCCCcHHHHHHHHCCC-----eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 3799999999999999997433 45555654 444444332 11 0111112222222
Q ss_pred CC----CccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc----C--------HHHHHHHHHHHhhcCc
Q 005417 606 YP----RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD----T--------ARLIESARALTTRLKW 669 (697)
Q Consensus 606 yp----rtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d----~--------~~~~~~~~~~~~~~~W 669 (697)
.| .+||+|-+..+|.... ......++-||-|+|||||.+++-. . .-.-++++.+... .|
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~----~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f 219 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAIN----PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KC 219 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSC----GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TE
T ss_pred CCcccCCCEEEEEEhhhhhhCC----HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-Ce
Confidence 22 6899999888877653 1334568999999999999996421 0 0124677777766 48
Q ss_pred eeEEeee
Q 005417 670 DARVIEI 676 (697)
Q Consensus 670 ~~~~~~~ 676 (697)
++.....
T Consensus 220 ~v~~~~~ 226 (252)
T 2gb4_A 220 SMQCLEE 226 (252)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8766543
No 423
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.21 E-value=0.00026 Score=70.42 Aligned_cols=135 Identities=16% Similarity=0.184 Sum_probs=71.4
Q ss_pred eEEEecccCchhhhhhhhcc---CCCeEEEEeecCCCCCchhhHhcc-Cccccccccccc--CCCCCCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEA--FPTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~---~~~vwvmnv~p~~~~~~l~~i~~R-Glig~~~~~~e~--f~typrtyDl~H~~~~~~ 620 (697)
..|||+|||.|.|+..|.+. ...|..+-+.|..-...+..+-.+ ++--+..|..+. ++..+.+||+|.++.. .
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-~ 157 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-Q 157 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-C
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-C
Confidence 47999999999999999863 123333322221000112222222 232233444432 2323478999998433 1
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEcCHH----------HHHHHHHHHhhcCceeEE-eeeccCC-CccEEEEE
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR----------LIESARALTTRLKWDARV-IEIESNS-DERLLICQ 688 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~----------~~~~~~~~~~~~~W~~~~-~~~e~~~-~~~~li~~ 688 (697)
.. ....++.++-|+|+|||.+++.-... ...+..+++....|+... .+.+.-+ ..-+++++
T Consensus 158 ~~-------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 158 PD-------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp TT-------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred cc-------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEEEE
Confidence 11 11235678999999999999953221 122223555666677654 3333222 23445555
Q ss_pred c
Q 005417 689 K 689 (697)
Q Consensus 689 K 689 (697)
|
T Consensus 231 ~ 231 (233)
T 2ipx_A 231 Y 231 (233)
T ss_dssp E
T ss_pred e
Confidence 4
No 424
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.20 E-value=0.00047 Score=65.45 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=63.1
Q ss_pred HHHHHHHHhccccccccccCCCEEEEeCCCCc-hHHHHHhh-cCCceeEEEEecCCHHHHHHHHHcCCCcEEEeecccCC
Q 005417 264 SHQIAEMIGLRNESNFILAGVRTILDIGCGYG-SFGAHLFS-KELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL 341 (697)
Q Consensus 264 ~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG-~~a~~La~-~g~~~~sV~gvD~S~~ml~~A~ergl~~~~~~~da~~L 341 (697)
.+.+.+.+..... ...+|||||||.| ..+..|++ .| ..|+++|+++..++ +.+.|..+
T Consensus 22 ~e~LaeYI~~~~~------~~~rVlEVG~G~g~~vA~~La~~~g---~~V~atDInp~Av~----------~v~dDiF~- 81 (153)
T 2k4m_A 22 WNDLAVYIIRCSG------PGTRVVEVGAGRFLYVSDYIRKHSK---VDLVLTDIKPSHGG----------IVRDDITS- 81 (153)
T ss_dssp HHHHHHHHHHHSC------SSSEEEEETCTTCCHHHHHHHHHSC---CEEEEECSSCSSTT----------EECCCSSS-
T ss_pred HHHHHHHHHhcCC------CCCcEEEEccCCChHHHHHHHHhCC---CeEEEEECCccccc----------eEEccCCC-
Confidence 4456665543322 3479999999999 59999997 65 45899999987655 45455544
Q ss_pred CCCC--CCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 342 PYPS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 342 Pfpd--~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
|..+ ..||+|.+.+. .++....+.++.+.+ |.-++|...
T Consensus 82 P~~~~Y~~~DLIYsirP----P~El~~~i~~lA~~v--~adliI~pL 122 (153)
T 2k4m_A 82 PRMEIYRGAALIYSIRP----PAEIHSSLMRVADAV--GARLIIKPL 122 (153)
T ss_dssp CCHHHHTTEEEEEEESC----CTTTHHHHHHHHHHH--TCEEEEECB
T ss_pred CcccccCCcCEEEEcCC----CHHHHHHHHHHHHHc--CCCEEEEcC
Confidence 3322 37999998876 334445555555544 456666543
No 425
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.18 E-value=0.00024 Score=75.19 Aligned_cols=95 Identities=17% Similarity=0.163 Sum_probs=59.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHh----ccCc---ccccccccccCCCCC-CccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~----~RGl---ig~~~~~~e~f~typ-rtyDl~H~~~~ 618 (697)
.+|||+|||.|.++..+.+. +. -.|+-+|....+..+- +.|+ |-+++.-.+.++ +| ..||+|.+..+
T Consensus 40 ~~VLDiGcGtG~ls~~la~~--g~--~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKH--GA--KHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWM 114 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHT--CC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCC
T ss_pred CEEEEecCccHHHHHHHHHC--CC--CEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCc
Confidence 47999999999999888863 21 1233333322233222 2354 223332223333 34 78999999766
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVI 649 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i 649 (697)
..... +.-.+..++-+++|+|+|||.++
T Consensus 115 ~~~l~---~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 115 GYFLL---YESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp BTTBS---TTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhcc---cHHHHHHHHHHHHhhcCCCeEEE
Confidence 44433 33445678899999999999998
No 426
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.17 E-value=8.1e-05 Score=74.50 Aligned_cols=131 Identities=12% Similarity=0.173 Sum_probs=74.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cccc---c-cc----------------cccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG---V-LH----------------DWCE 601 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig---~-~~----------------~~~e 601 (697)
.+|||+|||.|.++..|.+.-.+- -+|+-+|-. ..+..+-++ |+-. + .. .|-.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPED--GKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 479999999999999998631000 123333332 333333222 3311 1 11 1323
Q ss_pred cCCCCC-CccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC------------HHHHHHHH----HHH
Q 005417 602 AFPTYP-RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESAR----ALT 664 (697)
Q Consensus 602 ~f~typ-rtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~----~~~ 664 (697)
.|+. + .+||+|.++..... ...++-++-|+|||||.+++.+- ......++ .+.
T Consensus 140 ~f~~-~~~~fD~I~~~~~~~~---------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 209 (239)
T 2hnk_A 140 DFAF-GPSSIDLFFLDADKEN---------YPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVY 209 (239)
T ss_dssp TTCC-STTCEEEEEECSCGGG---------HHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHH
T ss_pred cccC-CCCCcCEEEEeCCHHH---------HHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHh
Confidence 3332 2 67999988644332 23678899999999999999651 12233333 344
Q ss_pred hhcCceeEEeeeccCCCccEEEEEccccc
Q 005417 665 TRLKWDARVIEIESNSDERLLICQKPFFK 693 (697)
Q Consensus 665 ~~~~W~~~~~~~e~~~~~~~li~~K~~~~ 693 (697)
..-.+++..... .+.+.+++|..-.
T Consensus 210 ~~~~~~~~~~p~----~~g~~~~~~~~~~ 234 (239)
T 2hnk_A 210 NDSLVDVSLVPI----ADGVSLVRKRLEH 234 (239)
T ss_dssp HCTTEEEEEECS----TTCEEEEEECCCC
T ss_pred hCCCeEEEEEEc----CCceEeeeehhhc
Confidence 445566665532 2568889887643
No 427
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.16 E-value=0.00035 Score=68.99 Aligned_cols=130 Identities=16% Similarity=0.265 Sum_probs=70.3
Q ss_pred eEEEecccCchhhhhhhhcc---CCCeEEEEeecCCCCCchhhHh----cc-Cccccccccccc--CCCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMIL----DR-GFVGVLHDWCEA--FPTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~---~~~vwvmnv~p~~~~~~l~~i~----~R-Glig~~~~~~e~--f~typrtyDl~H~~ 616 (697)
.+|||+|||.|.++.+|.+. ...|..+-+.| ..+..+. ++ ++--+..|..+. +...+.+||+|-++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~----~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH----HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 37999999999999998853 12343333322 1111111 11 222223344331 22335689999975
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC---------HH-H-HHHHHHHHhhcCceeEEe-eeccCC-Ccc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT---------AR-L-IESARALTTRLKWDARVI-EIESNS-DER 683 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~---------~~-~-~~~~~~~~~~~~W~~~~~-~~e~~~-~~~ 683 (697)
.... -....++-++-|+|+|||++++.-. .. + -++++.+... ++.... +.+... +.-
T Consensus 151 ~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--f~~~~~~~~~~~~~~~~ 220 (227)
T 1g8a_A 151 VAQP--------TQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY--FEVIERLNLEPYEKDHA 220 (227)
T ss_dssp CCST--------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT--SEEEEEEECTTTSSSEE
T ss_pred CCCH--------hHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh--ceeeeEeccCcccCCCE
Confidence 4311 1112458999999999999998411 11 1 2456666333 765433 322222 344
Q ss_pred EEEEEcc
Q 005417 684 LLICQKP 690 (697)
Q Consensus 684 ~li~~K~ 690 (697)
+++++|+
T Consensus 221 ~~~~~~~ 227 (227)
T 1g8a_A 221 LFVVRKT 227 (227)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 6777763
No 428
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.14 E-value=0.0001 Score=72.84 Aligned_cols=89 Identities=16% Similarity=0.095 Sum_probs=58.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-----CcccccccccccCCCCCCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-----Glig~~~~~~e~f~typrtyDl~H~~~~~~ 620 (697)
.+|||+|||.|.++..|.+.. -+|+-+|-. ..+..+-++ .+--+..|..+.++ -+.+||+|.+...+.
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~-----~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIV-----DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAP 145 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-----SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBS
T ss_pred CEEEEEcCCCCHHHHHHHHHc-----CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHH
Confidence 389999999999999998732 234444443 444444443 22223334444333 236899999987765
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
... -++-|+|+|||.+++...
T Consensus 146 ~~~------------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 146 TLL------------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp SCC------------HHHHHTEEEEEEEEEEEC
T ss_pred HHH------------HHHHHHcCCCcEEEEEEc
Confidence 432 378899999999999754
No 429
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.14 E-value=0.00074 Score=68.71 Aligned_cols=103 Identities=14% Similarity=0.143 Sum_probs=63.4
Q ss_pred CCCCCCceeEEEecccCchhhhhhhhcc---CCCeEEEEeecCCCCCchhhHhccC-ccccccccccc--CCCCCCcccc
Q 005417 539 PSPPYNMVRNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRG-FVGVLHDWCEA--FPTYPRTYDL 612 (697)
Q Consensus 539 ~~~~~~~iRnvmDm~~g~g~Faaal~~~---~~~vwvmnv~p~~~~~~l~~i~~RG-lig~~~~~~e~--f~typrtyDl 612 (697)
..+++|. +|||+|||.|.|+.+|.+. +-.|....+.|.-...-...+-+++ +..+..|-+.+ .+.-+.++|+
T Consensus 73 l~ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 73 LPVKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp CCCCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred cCCCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEE
Confidence 4445554 8999999999999999852 1235555554432211222333444 45555555543 2223367888
Q ss_pred ccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 613 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 613 ~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
|.++-.+. -....++-|+-|+|+|||.++|.
T Consensus 151 Vf~d~~~~--------~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 151 LYADVAQP--------EQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEECCCCT--------THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEeccCC--------hhHHHHHHHHHHhccCCCEEEEE
Confidence 87642221 12346889999999999999986
No 430
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.14 E-value=0.00011 Score=70.64 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=59.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--cc-ccccccccCCCC-CCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTY-PRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig-~~~~~~e~f~ty-prtyDl~H~~~ 617 (697)
.+|||+|||.|.++.++++.+.. .|+-+|-. ..+..+-+ .|+ +- +..|..+..+.+ +.+||+|-++.
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA----SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC----eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 47999999999999977763211 23333433 33333322 243 11 222333322222 47899999976
Q ss_pred ccccccCCCCCCCcchhhhhhcc--cccCCcEEEEEcC
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDR--ILRPEGWVIIRDT 653 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dR--iLRP~G~~i~~d~ 653 (697)
.|.... -.+..++-++-| +|+|||.+++...
T Consensus 122 p~~~~~-----~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 122 PYNVDS-----ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CTTSCH-----HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCCcch-----hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 655321 234578888888 9999999999743
No 431
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.13 E-value=8.8e-05 Score=81.25 Aligned_cols=114 Identities=14% Similarity=0.233 Sum_probs=70.5
Q ss_pred eeEEEecccC------chhhhhhhhcc---CCCeEEEEeecCCCCCchhhHhccCcccccccccc-cCCCC----CCccc
Q 005417 546 VRNVLDMNAH------FGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCE-AFPTY----PRTYD 611 (697)
Q Consensus 546 iRnvmDm~~g------~g~Faaal~~~---~~~vwvmnv~p~~~~~~l~~i~~RGlig~~~~~~e-~f~ty----prtyD 611 (697)
-.+|||+||| .||....|... +..|..+-+-|.- . .....+-=+..|-.+ +|... +.+||
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m----~--~~~~rI~fv~GDa~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS----H--VDELRIRTIQGDQNDAEFLDRIARRYGPFD 290 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG----G--GCBTTEEEEECCTTCHHHHHHHHHHHCCEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH----h--hcCCCcEEEEecccccchhhhhhcccCCcc
Confidence 3689999999 78877777652 2234444444332 1 111122112223222 12200 26899
Q ss_pred cccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC------------------HHHHHHHHHHHhhcCceeE
Q 005417 612 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------------ARLIESARALTTRLKWDAR 672 (697)
Q Consensus 612 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------------~~~~~~~~~~~~~~~W~~~ 672 (697)
+|.++.. ++. ......|-|+=|+|||||++|+.|- ..+++.++++...++|.-.
T Consensus 291 lVisdgs--H~~-----~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~~ 362 (419)
T 3sso_A 291 IVIDDGS--HIN-----AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQEL 362 (419)
T ss_dssp EEEECSC--CCH-----HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGGS
T ss_pred EEEECCc--ccc-----hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccccc
Confidence 9998654 222 2345789999999999999999632 3578999999999997643
No 432
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.12 E-value=0.00038 Score=70.09 Aligned_cols=118 Identities=17% Similarity=0.158 Sum_probs=66.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc------------Cccc---ccccccccCCC-C-CC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------------GFVG---VLHDWCEAFPT-Y-PR 608 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R------------Glig---~~~~~~e~f~t-y-pr 608 (697)
..|||+|||.|+|+.+|...... .+|+-+|-. .-+..+-++ |+-. +..|..+.++. + +.
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPE---DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTT---SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCC---CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 57999999999999998863211 234444433 333333221 4411 22233222221 2 26
Q ss_pred ccccccccCccc-ccc---CCCCCCCcchhhhhhcccccCCcEEEE-EcCHHHHHHHHHHHhhcCc
Q 005417 609 TYDLVHAEGLLS-LES---GHRHRCSTLDIFTEIDRILRPEGWVII-RDTARLIESARALTTRLKW 669 (697)
Q Consensus 609 tyDl~H~~~~~~-~~~---~~~~~c~~~~~l~E~dRiLRP~G~~i~-~d~~~~~~~~~~~~~~~~W 669 (697)
++|.|... |. .+. ....|-....++-++-|+|+|||.+++ .|..+..+.+.+.+..-.+
T Consensus 128 ~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 78877532 21 110 000122224789999999999999998 4776666666655554433
No 433
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.12 E-value=0.00012 Score=73.52 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=53.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-Cch-hhH---h----ccCcccc--cccccccCCC-CCCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHL-PMI---L----DRGFVGV--LHDWCEAFPT-YPRTYDLVH 614 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l-~~i---~----~RGlig~--~~~~~e~f~t-yprtyDl~H 614 (697)
..|||+|||.|.++.+|...... .+|+=+|-. ..+ .++ - +.|+-.+ ...=.+.+|. +...+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~---~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQN---TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTT---EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCC---CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 57999999999999999842222 234444543 333 222 2 3455221 1111223332 113444454
Q ss_pred ccCccccccCCCCCCCcchhhhhhcccccCCcEEEE
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 650 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 650 (697)
+...+..... ..+-....+|-|+-|+|||||.+++
T Consensus 103 ~~~~~~~~~~-~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLLE-YVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHHH-HHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHhh-hhhcchHHHHHHHHHhcCCCcEEEE
Confidence 4322111000 0112234688999999999999999
No 434
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.11 E-value=0.00048 Score=69.65 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=57.6
Q ss_pred eEEEecccCchhhhhhhhccCCC-eEEEEeecCCC----CCchhhHhcc----Cc---ccc-ccc-cc-ccCCCCCCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIG----TNHLPMILDR----GF---VGV-LHD-WC-EAFPTYPRTYD 611 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~-vwvmnv~p~~~----~~~l~~i~~R----Gl---ig~-~~~-~~-e~f~typrtyD 611 (697)
..|||+|||.|.++..|.+...+ .-|.-|=+... +..+..+-++ |+ +-+ ..| .. +..+.-+.+||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 47999999999999999863111 32333322221 1255544332 33 111 122 21 12221237999
Q ss_pred cccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 612 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 612 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+|++..++.+.. + ...++-.+.++++|||++++.+
T Consensus 125 ~v~~~~~l~~~~---~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 125 RVVLAHSLWYFA---S---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EEEEESCGGGSS---C---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEccchhhCC---C---HHHHHHHHHHHhCCCCEEEEEE
Confidence 999999987664 2 2344445566666799999963
No 435
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.11 E-value=0.00038 Score=70.26 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=67.1
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----------cCc--cc-ccccccccCC--CCCCc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----------RGF--VG-VLHDWCEAFP--TYPRT 609 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----------RGl--ig-~~~~~~e~f~--typrt 609 (697)
-..|||+|||.|.|+.+|.+..... +|+=+|-. ..+..+-+ .|+ |- +..|..+.++ .-+.+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~---~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDT---LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTS---EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCC---eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3579999999999999998631122 33333433 23322211 233 11 1223322222 11379
Q ss_pred cccccccCccccccC---CCCCCCcchhhhhhcccccCCcEEEEE-cCHHHHHHHHHHHhhcC-cee
Q 005417 610 YDLVHAEGLLSLESG---HRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLK-WDA 671 (697)
Q Consensus 610 yDl~H~~~~~~~~~~---~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~-W~~ 671 (697)
||+|.+... ..|.. .+.|.....+|-|+-|+|+|||.+++. |.....+.+.+....-. |+.
T Consensus 124 ~D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~ 189 (235)
T 3ckk_A 124 LTKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFER 189 (235)
T ss_dssp EEEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred eeEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 999875321 11210 013344457999999999999999985 66666666666554443 443
No 436
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.10 E-value=8.5e-05 Score=73.82 Aligned_cols=94 Identities=11% Similarity=0.182 Sum_probs=60.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc---cc-ccccccccCCCC--CCccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VG-VLHDWCEAFPTY--PRTYDLVHA 615 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl---ig-~~~~~~e~f~ty--prtyDl~H~ 615 (697)
.+|||+|||.|.++.+|.+. .+ .-+|+-++-. ..+..+-++ |+ |- +..|..+..+.. +.+||+|-+
T Consensus 56 ~~vLdiG~G~G~~~~~la~~-~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQA-LP--EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHH-CT--TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHH-CC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 48999999999999999863 21 1234444443 444444443 43 11 223444433333 478999988
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+...+. ...+|-++-|+|||||.+++.+
T Consensus 133 ~~~~~~---------~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKGQ---------YRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGSC---------HHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHHH---------HHHHHHHHHHHcCCCeEEEEEc
Confidence 655432 3368889999999999999974
No 437
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.10 E-value=0.0002 Score=68.62 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=53.9
Q ss_pred eEEEecccCchhhhhhhhccC-----------CCeEEEEeecCCCCCchhhHhccCcccccccccc---------cCCCC
Q 005417 547 RNVLDMNAHFGGFNSALLEKG-----------KSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCE---------AFPTY 606 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~-----------~~vwvmnv~p~~~~~~l~~i~~RGlig~~~~~~e---------~f~ty 606 (697)
.+|||+|||.|.++.+|.+.- ..|..+-+.|......+.++ . -.|... .++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~~~~~-- 94 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRILEVLP-- 94 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHHHHSG--
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHHHhcC--
Confidence 489999999999999998631 22444444332111111111 0 111111 122
Q ss_pred CCccccccccCcccccc----C-CCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 607 PRTYDLVHAEGLLSLES----G-HRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 607 prtyDl~H~~~~~~~~~----~-~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
..+||+|-|+..+.... . .........++-|+-|+|||||.+++.+
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 15899999865433210 0 0000011367889999999999999973
No 438
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.10 E-value=0.0013 Score=67.04 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=70.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc-------cCc---cccc-ccccccCC-----CC-CC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD-------RGF---VGVL-HDWCEAFP-----TY-PR 608 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~-------RGl---ig~~-~~~~e~f~-----ty-pr 608 (697)
.+|||+|||.|.++..|.+. .+- .+|+-+|-. ..+..+-+ .|+ +-++ .|..+..+ .+ +.
T Consensus 38 ~~VLDlG~G~G~~~l~la~~-~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAAR-LEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHH-CTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CEEEEeCChHhHHHHHHHHh-CCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 58999999999999888763 221 234444433 22222221 233 1222 23322211 12 37
Q ss_pred ccccccccCccccccC------------CCCCCCcchhhhhhcccccCCcEEEEEcCHHHHHHHHHHHhhcCcee
Q 005417 609 TYDLVHAEGLLSLESG------------HRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDA 671 (697)
Q Consensus 609 tyDl~H~~~~~~~~~~------------~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~ 671 (697)
+||+|-++--|....+ ....+.+..++-++-|+|+|||.+++--..+...++.++++.- |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 8999999854432100 0033567788999999999999998876666667777766663 653
No 439
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.09 E-value=5.7e-05 Score=70.43 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=56.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc-c-cccccccccCCCCC---Ccccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-V-GVLHDWCEAFPTYP---RTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl-i-g~~~~~~e~f~typ---rtyDl~H~~ 616 (697)
.+|||+|||.|.++.+|.+.... |+-+|-. ..+..+-+ .|+ + =+..|+.+..+..+ .+||+|.++
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~-----v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE-----AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE-----EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe-----EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 47999999999999999874322 4444543 33333332 232 1 11223333222222 379999998
Q ss_pred CccccccCCCCCCCcchhhhhhc--ccccCCcEEEEEcC
Q 005417 617 GLLSLESGHRHRCSTLDIFTEID--RILRPEGWVIIRDT 653 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~d--RiLRP~G~~i~~d~ 653 (697)
..|. . . ...++-++- |+|+|||.+++...
T Consensus 118 ~~~~--~---~---~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 118 PPYA--M---D---LAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp CCTT--S---C---TTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred CCCc--h---h---HHHHHHHHHhhcccCCCcEEEEEeC
Confidence 7765 1 1 224555555 99999999999643
No 440
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.09 E-value=0.00044 Score=69.14 Aligned_cols=108 Identities=16% Similarity=0.141 Sum_probs=67.1
Q ss_pred eEEEecccCchhhhhhhhcc-CCCeEEEEeecCCCC-CchhhHhcc-----Cc---cccccccccc-CCCCCCccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR-----GF---VGVLHDWCEA-FPTYPRTYDLVHA 615 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~-~~~vwvmnv~p~~~~-~~l~~i~~R-----Gl---ig~~~~~~e~-f~typrtyDl~H~ 615 (697)
.+|||+|||.|.++.+|.+. .... +|+-+|.. ..+..+-++ |. --...|..+. |+. .+||+|-+
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~--~~~D~v~~ 172 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE--AAYDGVAL 172 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT--TCEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC--CCcCEEEE
Confidence 48999999999999999863 1011 33444433 444444433 42 1122344443 332 68999987
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-HHHHHHHHHHhhcCce
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWD 670 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-~~~~~~~~~~~~~~W~ 670 (697)
+ --....+|-++-|+|+|||.+++.... +.+.++.+.++...|.
T Consensus 173 ~-----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 173 D-----------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp E-----------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred C-----------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 2 112336899999999999999997654 3555655555555554
No 441
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.09 E-value=8.7e-05 Score=73.21 Aligned_cols=129 Identities=15% Similarity=0.106 Sum_probs=71.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc---cccc-ccccccCCCCC-----Ccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VGVL-HDWCEAFPTYP-----RTYDL 612 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl---ig~~-~~~~e~f~typ-----rtyDl 612 (697)
++|||+|||.|.++.+|.+.-.+- -.|+-+|-. ..+..+-+ .|+ +-++ .|..+.++..+ .+||+
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPAD--GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 589999999999999998621100 123333332 33333322 244 1111 22222222221 57999
Q ss_pred ccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC------------HHHHHHHHHH----HhhcCceeEEeee
Q 005417 613 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARAL----TTRLKWDARVIEI 676 (697)
Q Consensus 613 ~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~------------~~~~~~~~~~----~~~~~W~~~~~~~ 676 (697)
|.++... .....++-++-|+|||||.+++.+. ......++++ ...=++++....+
T Consensus 149 v~~d~~~---------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 219 (229)
T 2avd_A 149 AVVDADK---------ENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL 219 (229)
T ss_dssp EEECSCS---------TTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECS
T ss_pred EEECCCH---------HHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEec
Confidence 9985432 2234678889999999999999532 2233334433 3344466555432
Q ss_pred ccCCCccEEEEEcc
Q 005417 677 ESNSDERLLICQKP 690 (697)
Q Consensus 677 e~~~~~~~li~~K~ 690 (697)
.+.++|+.|.
T Consensus 220 ----~dGl~~~~k~ 229 (229)
T 2avd_A 220 ----GDGLTLAFKI 229 (229)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCceEEEEEC
Confidence 2678888773
No 442
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.09 E-value=0.0012 Score=71.22 Aligned_cols=107 Identities=16% Similarity=0.097 Sum_probs=74.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHc----C-------CCcEEEeecccCCC-CCCCCccE
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-------LPAMIGSFASKQLP-YPSLSFDM 350 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~er----g-------l~~~~~~~da~~LP-fpd~sFDl 350 (697)
++.+|||+.||+|.=+.+|++.+ ....|+++|.++.-++..+++ + .++.+...|+..++ ...+.||.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 34899999999999999998874 345799999999877655432 2 24556666766654 34578999
Q ss_pred EEe----ccc---ccc--------cccc--------HHHHHHHHHHhccCCeEEEEEeCCCCh
Q 005417 351 LHC----ARC---GVD--------WDQK--------DGILLLEVDRVLKPGGYFVWTSPLTNP 390 (697)
Q Consensus 351 V~~----~~~---llh--------~~~d--------~~~~L~El~RvLKPGG~Lvis~p~~~~ 390 (697)
|++ +.. ... +.+. ..++|....+.|||||+|+.++-....
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 995 321 111 1100 125788899999999999999865543
No 443
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.07 E-value=0.00014 Score=73.24 Aligned_cols=96 Identities=8% Similarity=0.018 Sum_probs=56.4
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhH----hccCccc---c-cccccccCCCC------CCcc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI----LDRGFVG---V-LHDWCEAFPTY------PRTY 610 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i----~~RGlig---~-~~~~~e~f~ty------prty 610 (697)
-++|||+|||.|..+.+|.+.-.+- -.|+-+|-. ..+.++ -+.|+-. + ..|..+.++.. +.+|
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDD--GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 4689999999999998887520000 122323322 223322 2235421 1 22333333322 4789
Q ss_pred ccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 611 DLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 611 Dl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
|+|.++.--. ....++-++-|+|||||++++.+
T Consensus 149 D~I~~d~~~~---------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDADKP---------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCchH---------HHHHHHHHHHHhcCCCeEEEEec
Confidence 9998864322 23467888889999999999864
No 444
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.06 E-value=0.00015 Score=73.65 Aligned_cols=96 Identities=9% Similarity=0.072 Sum_probs=56.1
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHh----ccCc---cccc-ccccccCCCC------CCcc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGF---VGVL-HDWCEAFPTY------PRTY 610 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~----~RGl---ig~~-~~~~e~f~ty------prty 610 (697)
-++|||+|||.|.++..|.+.-.+- -.|+-.|-. ..+.++- +.|+ |-++ .|..+..+.. +.+|
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPED--GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTT--CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3589999999999999887631000 123333322 2232222 2354 1122 2333322322 4789
Q ss_pred ccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 611 DLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 611 Dl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
|+|.++.... ....++-++-|+|||||.+++.+
T Consensus 158 D~V~~d~~~~---------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADKD---------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCST---------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCchH---------HHHHHHHHHHHhCCCCeEEEEec
Confidence 9998854322 23467888899999999999854
No 445
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.06 E-value=0.00027 Score=73.09 Aligned_cols=95 Identities=14% Similarity=0.014 Sum_probs=62.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCcc-ccccccccc-C---CCCCCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFV-GVLHDWCEA-F---PTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGli-g~~~~~~e~-f---~typrtyDl~H~~~~~~ 620 (697)
..|||+|||.|.++..|.+... .|+-+|.. .-+..+-++--- .+-.+|... + ...+.+||+|-|+.++.
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~-----~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGA-----SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred CEEEEEeCcchHHHHHHHhcCC-----EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhH
Confidence 4799999999999999987433 34444544 445444443210 122333221 1 12246899999998887
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
++. .-....+|-+|-|+| |||.++++
T Consensus 122 ~~~----~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 122 RFT----TEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp GSC----HHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred hCC----HHHHHHHHHHHHHhC-cCcEEEEE
Confidence 653 123557899999999 99999997
No 446
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.06 E-value=0.00014 Score=78.02 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=62.8
Q ss_pred ceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc-cCcccccccccccCCCCCCccccccccCcccccc
Q 005417 545 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 545 ~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~-RGlig~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
....|||+|||.|.++.+|.+....+-+ +-.|-+..+..+-+ .++--+.+|..+++ |. ||+|.+..++.++.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~---~~~D~~~~~~~a~~~~~v~~~~~d~~~~~---~~-~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKG---INFDLPQVIENAPPLSGIEHVGGDMFASV---PQ-GDAMILKAVCHNWS 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECHHHHTTCCCCTTEEEEECCTTTCC---CC-EEEEEEESSGGGSC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeE---EEeChHHHHHhhhhcCCCEEEeCCcccCC---CC-CCEEEEecccccCC
Confidence 4578999999999999999874223322 22221211211111 12333345555544 44 99999999998775
Q ss_pred CCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 624 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
. . ....+|-++-|+|+|||.++|.|
T Consensus 282 d--~--~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 282 D--E--KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp H--H--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred H--H--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 1 12368999999999999999863
No 447
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.04 E-value=0.0001 Score=69.81 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=59.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcc----cccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGli----g~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++.+|.+. +. -+|+-+|-. ..+..+-+ .|+- =+..|+.+.++..+..||+|.++.
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~--~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSR--GM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHT--TC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CeEEEeCCCCCHHHHHHHHc--CC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 47999999999999999863 22 234444543 33333322 3331 123455454444457799999976
Q ss_pred ccccccCCCCCCCcchhhhhhc--ccccCCcEEEEEcC
Q 005417 618 LLSLESGHRHRCSTLDIFTEID--RILRPEGWVIIRDT 653 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~d--RiLRP~G~~i~~d~ 653 (697)
.|... ....++-++- |+|+|||.+++...
T Consensus 109 ~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 109 PYAKE-------TIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp SSHHH-------HHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCCcc-------hHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 65321 1234455554 99999999999643
No 448
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.04 E-value=0.00033 Score=75.22 Aligned_cols=99 Identities=15% Similarity=0.155 Sum_probs=63.0
Q ss_pred CCceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhcc-CcccccccccccCCCCCCccccccccCcccc
Q 005417 543 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 543 ~~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~R-Glig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
....+.|+|+|||.|.++.+|++. .|-. .++-.|-+..+..+-++ ++-=+-+|.-+++| .. |+|.+..++..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~-~p~~--~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p---~~-D~v~~~~vlh~ 273 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAK-YPSI--NAINFDLPHVIQDAPAFSGVEHLGGDMFDGVP---KG-DAIFIKWICHD 273 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHH-CTTC--EEEEEECHHHHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCGGG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHh-CCCC--EEEEEehHHHHHhhhhcCCCEEEecCCCCCCC---CC-CEEEEechhhc
Confidence 345789999999999999999873 2211 11212212111111111 23223455555554 44 99999999988
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
|.. -....+|-++=|.|+|||.++|.|
T Consensus 274 ~~~----~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 274 WSD----EHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp BCH----HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCH----HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 862 123468999999999999999964
No 449
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.00 E-value=0.00018 Score=69.94 Aligned_cols=89 Identities=13% Similarity=0.076 Sum_probs=57.1
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc--cc-ccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl--ig-~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.+++.|.+... +|+-+|-. ..+..+-++ |+ +- +..|..+..+. +.+||+|.++..
T Consensus 79 ~~vLdiG~G~G~~~~~la~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~ 152 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHLVQ-----HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA-RAPFDAIIVTAA 152 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEESSB
T ss_pred CEEEEEcCCCCHHHHHHHHhCC-----EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-CCCccEEEEccc
Confidence 4799999999999999987422 33334433 344444332 43 11 22334333222 468999999877
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
+.... =++-|+|+|||++++.-.
T Consensus 153 ~~~~~------------~~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 153 PPEIP------------TALMTQLDEGGILVLPVG 175 (210)
T ss_dssp CSSCC------------THHHHTEEEEEEEEEEEC
T ss_pred hhhhh------------HHHHHhcccCcEEEEEEc
Confidence 65543 267899999999999643
No 450
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=96.99 E-value=0.00041 Score=73.90 Aligned_cols=95 Identities=15% Similarity=0.129 Sum_probs=56.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHh----ccCc---ccccccccccCCCCC-CccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~----~RGl---ig~~~~~~e~f~typ-rtyDl~H~~~~ 618 (697)
..|||+|||.|.++..|.+.+. . .|+-+|....+..+- +.|+ |-+++.=.+.++ +| .+||+|-+..+
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~-~---~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGA-K---KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWM 140 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-S---EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCC
T ss_pred CEEEEeeccCcHHHHHHHHcCC-C---EEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCc
Confidence 4799999999999998886321 1 222223222233222 2344 222322222232 34 78999998764
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVI 649 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i 649 (697)
..... +.-.+..+|-++.|+|+|||.+|
T Consensus 141 ~~~l~---~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLL---FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBT---TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhcc---CHHHHHHHHHHHHhhcCCCcEEE
Confidence 22222 22334568999999999999998
No 451
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.98 E-value=0.00066 Score=69.52 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=68.9
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-----Cc---ccccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GF---VGVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-----Gl---ig~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|+++..|.+.-.+- ..|+-+|-. ..+..+-++ |+ --+..|..++++. .+||+|-++
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~--~~fD~Vi~~- 186 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD--QMYDAVIAD- 186 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS--CCEEEEEEC-
T ss_pred CEEEEecCCCCHHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcC--CCccEEEEc-
Confidence 489999999999999998630011 133334433 444444333 53 1123455554443 689999872
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCHH-HHHHHHHHHhhcCcee
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR-LIESARALTTRLKWDA 671 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~~-~~~~~~~~~~~~~W~~ 671 (697)
. -....+|-++-|+|+|||.+++.+... ..+++.+......|..
T Consensus 187 ~----------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 187 I----------PDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp C----------SCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred C----------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 1 123468999999999999999976543 5566666666555654
No 452
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.95 E-value=0.00078 Score=66.89 Aligned_cols=103 Identities=12% Similarity=0.045 Sum_probs=67.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc----ccccccccccC-CCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF----VGVLHDWCEAF-PTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl----ig~~~~~~e~f-~typrtyDl~H~~ 616 (697)
.+|||+|||.|.++.+|.+. ..+|+-+|-. ..+..+-++ |+ --+..|..+.+ + +..||+|-++
T Consensus 93 ~~vldiG~G~G~~~~~l~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~v~~~ 165 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEV-----AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP--EGIFHAAFVD 165 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHH-----SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC--TTCBSEEEEC
T ss_pred CEEEEeCCCccHHHHHHHHh-----CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC--CCcccEEEEC
Confidence 37999999999999999863 2345555544 555555443 43 12234455544 2 2689999872
Q ss_pred CccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhc
Q 005417 617 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRL 667 (697)
Q Consensus 617 ~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~ 667 (697)
--....++-++-|+|+|||.+++... .+.+.++.......
T Consensus 166 -----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 166 -----------VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp -----------SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred -----------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 11334688899999999999999766 45566666655544
No 453
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.94 E-value=0.0017 Score=70.41 Aligned_cols=102 Identities=13% Similarity=0.038 Sum_probs=70.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHHcCC-------------CcEEEeecccCC----CCCC
Q 005417 283 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------------PAMIGSFASKQL----PYPS 345 (697)
Q Consensus 283 ~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~ergl-------------~~~~~~~da~~L----Pfpd 345 (697)
++++||=||.|.|..+..++++. ...++.+|+++..++.|++... .+.+...|+... .-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~--~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcC--CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 45899999999999999999874 3679999999999999987421 133444443221 1134
Q ss_pred CCccEEEecccccccccc---------HHHHHHHHHHhccCCeEEEEEeC
Q 005417 346 LSFDMLHCARCGVDWDQK---------DGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 346 ~sFDlV~~~~~llh~~~d---------~~~~L~El~RvLKPGG~Lvis~p 386 (697)
+.||+|+.-..-.....+ ...+++.++++|+|||.++...-
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 689999975221110111 13578889999999999998653
No 454
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.93 E-value=0.00059 Score=66.79 Aligned_cols=123 Identities=15% Similarity=0.081 Sum_probs=67.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhH--------hccCcc--cccccccccCCCCCCccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI--------LDRGFV--GVLHDWCEAFPTYPRTYDLVHA 615 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i--------~~RGli--g~~~~~~e~f~typrtyDl~H~ 615 (697)
..|||+|||.|.++.+|.+. .|- -+|+-+|-. ..|..+ -.+|+- -..+.=.+.++.-+.+ |.++.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~-~p~--~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQ-NPS--RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHH-CTT--EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CEEEEecCCCCHHHHHHHHH-CCC--CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 47999999999999999873 211 133444443 333321 134542 2222112224432345 76663
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc------------------CH-HHHHHHHHHHhhcCceeEEe
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD------------------TA-RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d------------------~~-~~~~~~~~~~~~~~W~~~~~ 674 (697)
.-.+..... .+--+...+|-|+-|+|||||.+++.- .. ...+.++.+...--|++.-.
T Consensus 105 ~~~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 105 LMPWGSLLR-GVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp ESCCHHHHH-HHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred Eccchhhhh-hhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 221111100 000112578999999999999999852 11 22344777888888877654
No 455
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.89 E-value=0.00064 Score=72.49 Aligned_cols=96 Identities=15% Similarity=0.163 Sum_probs=59.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc----cCc---ccccccccccCCCCCCccccccccCcc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGF---VGVLHDWCEAFPTYPRTYDLVHAEGLL 619 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~----RGl---ig~~~~~~e~f~typrtyDl~H~~~~~ 619 (697)
.+|||+|||.|.++..+.+.+. .- |+-++....+..+-+ .|+ |-+++.=-+.++ .|..||+|-+..++
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~-~~---V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGA-RK---IYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISEPMG 126 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-SE---EEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEEECCCB
T ss_pred CEEEEcCCCccHHHHHHHhCCC-CE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC-CCCceeEEEEeCch
Confidence 4899999999999988876321 12 222222223332222 254 222222122222 35789999998877
Q ss_pred ccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 620 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 620 ~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
.++. .-.+...+.++-|+|+|||.+++.
T Consensus 127 ~~~~----~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 127 YMLF----NERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTBT----TTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCC----hHHHHHHHHHHHhhcCCCeEEEEe
Confidence 6654 133556788999999999999853
No 456
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.88 E-value=0.0013 Score=68.41 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=56.5
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCC--C-CchhhHhcc--Ccccc--cccccccCCCCCCccccccccCc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIG--T-NHLPMILDR--GFVGV--LHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~--~-~~l~~i~~R--Glig~--~~~~~e~f~typrtyDl~H~~~~ 618 (697)
-..|||+|||.|+|+..|.+. ..|.-+-+.|.-. . +.+. .-.. ++.-+ -.|-. .++ +.+||+|-|+..
T Consensus 83 g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~~~~-~~~~~~~v~~~~~~~D~~-~l~--~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEKPRL-VETFGWNLITFKSKVDVT-KME--PFQADTVLCDIG 157 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCCCCC-CCCTTGGGEEEECSCCGG-GCC--CCCCSEEEECCC
T ss_pred CCEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhchhh-hhhcCCCeEEEeccCcHh-hCC--CCCcCEEEECCC
Confidence 358999999999999999874 5677666666310 0 1000 0000 11111 12322 244 589999998654
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCc--EEEEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEG--WVIIR 651 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G--~~i~~ 651 (697)
+..-....+.-....+|-++.|+|+||| .|++.
T Consensus 158 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 158 ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 2110000000000126788999999999 99885
No 457
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.87 E-value=0.00079 Score=72.85 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=58.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhH----hccCccc------ccccccccCCCCCCccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI----LDRGFVG------VLHDWCEAFPTYPRTYDLVHA 615 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i----~~RGlig------~~~~~~e~f~typrtyDl~H~ 615 (697)
.+|||+|||.|.|+.+|.+..... .|+-+|.. ..+..+ -+.|+-. +..|..+.++ +.+||+|-+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~---~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--~~~fD~Ii~ 298 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQA---KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLC 298 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--TTCEEEEEE
T ss_pred CeEEEEeCcchHHHHHHHHHCCCC---EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--CCCeeEEEE
Confidence 689999999999999998742111 23333332 222222 2234321 2334444443 268999999
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEE
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 651 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~ 651 (697)
+-.|..... -.+-....++-++-|+|+|||.+++-
T Consensus 299 nppfh~~~~-~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 299 NPPFHQQHA-LTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp CCCC--------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccCcc-cCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 888764210 01122235789999999999999995
No 458
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.84 E-value=0.0003 Score=69.31 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=54.0
Q ss_pred eEEEecccCchhhhhhhhcc-CCCeEEEEeecCCCC-CchhhHhcc----C--------cccccccccccCCCCCCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR----G--------FVGVLHDWCEAFPTYPRTYDL 612 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~-~~~vwvmnv~p~~~~-~~l~~i~~R----G--------lig~~~~~~e~f~typrtyDl 612 (697)
.+|||+|||.|.+++.|.+. +... +|+-+|-. ..+..+-++ | +--+..|..+.++ -+.+||+
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTG---KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCc---EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 37999999999999998752 1111 23333332 333333221 1 2122334443322 1368999
Q ss_pred ccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 613 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 613 ~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
|+++..+. .++-++-|+|+|||.+++.-
T Consensus 155 i~~~~~~~------------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAP------------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEECSBBS------------SCCHHHHHTEEEEEEEEEEE
T ss_pred EEECCchH------------HHHHHHHHhcCCCcEEEEEE
Confidence 99865542 35668889999999999964
No 459
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.81 E-value=0.00046 Score=74.04 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=63.0
Q ss_pred CceeEEEecccCchhhhhhhhccCC--CeEEEEeecCCCCCchhhHhcc-CcccccccccccCCCCCCccccccccCccc
Q 005417 544 NMVRNVLDMNAHFGGFNSALLEKGK--SVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 544 ~~iRnvmDm~~g~g~Faaal~~~~~--~vwvmnv~p~~~~~~l~~i~~R-Glig~~~~~~e~f~typrtyDl~H~~~~~~ 620 (697)
...+.|+|+|||.|.++.+|++... .+.+.-+ +..+..+-++ ++-=+-+|..+++| .. |+|.+..++.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~v~~~~~D~~~~~p---~~-D~v~~~~vlh 270 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-----PHVISEAPQFPGVTHVGGDMFKEVP---SG-DTILMKWILH 270 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-----HHHHHhhhhcCCeEEEeCCcCCCCC---CC-CEEEehHHhc
Confidence 4578999999999999999986321 2222222 2112111111 23233455555555 34 9999999998
Q ss_pred cccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 621 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.|.. -....+|-++=|.|+|||+++|.|
T Consensus 271 ~~~d----~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 271 DWSD----QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GSCH----HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCCH----HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8852 123468999999999999999964
No 460
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.80 E-value=0.0009 Score=67.95 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=54.8
Q ss_pred eEEEecccCchhhhhhhhcc---CCCeEEEEeecCCCCCchhhHhcc-CcccccccccccC--CCCCCccccccccCccc
Q 005417 547 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAF--PTYPRTYDLVHAEGLLS 620 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~---~~~vwvmnv~p~~~~~~l~~i~~R-Glig~~~~~~e~f--~typrtyDl~H~~~~~~ 620 (697)
-.|||+|||.|++++.|.+. +-.|..+-+-|.-...-+..+-+| .+.-+..|-..+. ...+.+||+|.++..+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~- 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ- 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC-
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC-
Confidence 47999999999999888752 113444333221100112223333 3444455544432 1224689999886433
Q ss_pred cccCCCCCCCcchhhh-hhcccccCCcEEEEE
Q 005417 621 LESGHRHRCSTLDIFT-EIDRILRPEGWVIIR 651 (697)
Q Consensus 621 ~~~~~~~~c~~~~~l~-E~dRiLRP~G~~i~~ 651 (697)
.....+|+ .+.|+|||||.+++.
T Consensus 157 --------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 157 --------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp --------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 22224444 566799999999985
No 461
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.79 E-value=0.00047 Score=69.73 Aligned_cols=89 Identities=17% Similarity=0.161 Sum_probs=56.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhccCc--ccccccccccCCCCCCccccccccCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF--VGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 623 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~RGl--ig~~~~~~e~f~typrtyDl~H~~~~~~~~~ 623 (697)
.+|||+|||.|.++..|.+.-... +|+-+|-. ..+..+-+++- .=+..|.. .++.-+.+||+|.+...
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESC-----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCC-----
Confidence 479999999999999998731011 33334443 55555555541 11122222 23322378999998432
Q ss_pred CCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 624 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 624 ~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
...+-|+-|+|||||.+++.+
T Consensus 158 --------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 --------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp --------CCCHHHHHHHEEEEEEEEEEE
T ss_pred --------hhhHHHHHHhcCCCcEEEEEE
Confidence 236889999999999999864
No 462
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.78 E-value=0.00075 Score=70.08 Aligned_cols=132 Identities=14% Similarity=0.173 Sum_probs=80.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc---cc-ccccccccCCCCCCcc---cccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTYPRTY---DLVH 614 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl---ig-~~~~~~e~f~typrty---Dl~H 614 (697)
.+|||+|||.|.++.+|... +- .+|+-+|-. ..+.++-+ .|+ +- +..||.++++ .+| |+|-
T Consensus 125 ~~vLDlG~GsG~~~~~la~~--~~--~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Iv 197 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF--SD--AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMIL 197 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH--SS--CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEE
T ss_pred CEEEEEeCchhHHHHHHHHC--CC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEE
Confidence 36999999999999999863 21 134444443 44444333 244 22 3456666553 578 9998
Q ss_pred ccCccccccC--------C-----CCCCCcchhhhhhc-ccccCCcEEEEEcCHHHHHHHHHHHhhcCceeEEeeeccCC
Q 005417 615 AEGLLSLESG--------H-----RHRCSTLDIFTEID-RILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESNS 680 (697)
Q Consensus 615 ~~~~~~~~~~--------~-----~~~c~~~~~l~E~d-RiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~e~~~ 680 (697)
++--+..... . -..+....++-++= +.|+|||++++--..+.-+.+.++.+.. .++ .+-.+
T Consensus 198 snPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~----~~~-~D~~g 272 (284)
T 1nv8_A 198 SNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT----VFL-KDSAG 272 (284)
T ss_dssp ECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC----EEE-ECTTS
T ss_pred EcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC----Cee-cccCC
Confidence 8633221110 0 01123336788888 9999999999975555566777766654 222 22345
Q ss_pred CccEEEEEcc
Q 005417 681 DERLLICQKP 690 (697)
Q Consensus 681 ~~~~li~~K~ 690 (697)
.++++++.++
T Consensus 273 ~~R~~~~~~k 282 (284)
T 1nv8_A 273 KYRFLLLNRR 282 (284)
T ss_dssp SEEEEEEECC
T ss_pred CceEEEEEEc
Confidence 6888887764
No 463
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.78 E-value=0.0005 Score=67.23 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=59.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc----ccc-cccccccCCCC-CCc-ccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF----VGV-LHDWCEAFPTY-PRT-YDLVH 614 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl----ig~-~~~~~e~f~ty-prt-yDl~H 614 (697)
..|||+|||.|.|+.+++... . -.|+-+|-. ..+..+-+ .|+ +-+ ..|..+..+.. +.+ ||+|-
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~-~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQ-A---KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTT-C---SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CeEEEcCCccCHHHHHHHHcc-C---CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 379999999999998766532 1 134445543 44443332 233 111 22333323332 468 99999
Q ss_pred ccCccccccCCCCCCCcchhhhhh--cccccCCcEEEEEcCHH
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDTAR 655 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~--dRiLRP~G~~i~~d~~~ 655 (697)
++..|.. -....++-++ -|+|+|||.+++.....
T Consensus 131 ~~~~~~~-------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 131 LDPPFHF-------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp ECCCSSS-------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred ECCCCCC-------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8766531 1234567777 78999999999975543
No 464
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.77 E-value=0.002 Score=65.82 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=69.8
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc----ccccccccccCCCCCCccccccccCc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF----VGVLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl----ig~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
+|||+|||.|.++.+|++.-.+- .+|+-+|-. ..+..+-++ |+ --+..|..+.++. .+||+|-++-
T Consensus 115 ~VLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~V~~~~- 189 (277)
T 1o54_A 115 RIIDTGVGSGAMCAVLARAVGSS--GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE--KDVDALFLDV- 189 (277)
T ss_dssp EEEEECCTTSHHHHHHHHHTTTT--CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC--CSEEEEEECC-
T ss_pred EEEEECCcCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC--CccCEEEECC-
Confidence 79999999999999998630111 134445543 445444433 43 1233455555443 6899998721
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhcCcee
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDA 671 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W~~ 671 (697)
-....+|-++-|+|+|||.+++... ...+.++.+.++...|..
T Consensus 190 ----------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 190 ----------PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp ----------SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred ----------cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 1123688899999999999999765 345666666666666653
No 465
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.74 E-value=0.0012 Score=67.92 Aligned_cols=112 Identities=19% Similarity=0.184 Sum_probs=66.5
Q ss_pred eEEEecccCchhhhhhhhccCC--CeEEEEeecCCCCCchhhHh----ccCc---ccccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGK--SVWVMNVVPTIGTNHLPMIL----DRGF---VGVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~--~vwvmnv~p~~~~~~l~~i~----~RGl---ig~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|+|+..|..... .|..+-+.| ..+..+- ..|+ .-+..|..+. +. +.+||+|-++.
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGY 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECC
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECC
Confidence 4799999999999999886322 333333322 2222221 1233 2122233332 32 56899997754
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH-------HHHHHHHHHHhhcCceeEEe
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------RLIESARALTTRLKWDARVI 674 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~-------~~~~~~~~~~~~~~W~~~~~ 674 (697)
.. ....++.++-|+|+|||.+++.+.. ...+.++.+.+.+.+++...
T Consensus 195 p~----------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (272)
T 3a27_A 195 VH----------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDY 248 (272)
T ss_dssp CS----------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEE
T ss_pred cc----------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEe
Confidence 33 3456888999999999999997442 23344555666666655543
No 466
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.72 E-value=0.0098 Score=62.10 Aligned_cols=100 Identities=12% Similarity=0.028 Sum_probs=65.9
Q ss_pred CCEEEEeCCCCchHHHHHhhc----CCceeEEEEecCCHH--------------------------HHHHHH----HcCC
Q 005417 284 VRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGS--------------------------QVQLTL----ERGL 329 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~----g~~~~sV~gvD~S~~--------------------------ml~~A~----ergl 329 (697)
+..|||+|+..|..+..+++. +.....|+++|..+. .++.++ +.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 479999999999988887643 112345778775311 122232 2344
Q ss_pred ---CcEEEeecccC-CC-CCCCCccEEEeccccccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 330 ---PAMIGSFASKQ-LP-YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 330 ---~~~~~~~da~~-LP-fpd~sFDlV~~~~~llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
.+.+..+++.. +| +++++||+|+.-.- ........|..+.+.|+|||++++.+.
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 36666665533 44 44678999997643 112234689999999999999999886
No 467
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.67 E-value=0.00032 Score=68.45 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=56.5
Q ss_pred eEEEecccCchhhhhhhhccCCC-eEEEEeecCCCC-CchhhHhcc----Cc--c-cccccccccCCCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILDR----GF--V-GVLHDWCEAFPTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~-vwvmnv~p~~~~-~~l~~i~~R----Gl--i-g~~~~~~e~f~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.+++.|.+...+ . +|+-+|-. ..+..+-++ |+ + -...|..+.++. +.+||+|.+..
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~v~~~~ 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP-LAPYDRIYTTA 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG-GCCEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC-CCCeeEEEECC
Confidence 38999999999999999863201 1 23333332 344444332 32 1 122333343331 36899999977
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 654 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 654 (697)
.+.... -++-|+|||||.+++.-..
T Consensus 155 ~~~~~~------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC------------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH------------HHHHHHcCCCcEEEEEECC
Confidence 765432 3788999999999987443
No 468
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=96.67 E-value=0.00052 Score=72.87 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=62.3
Q ss_pred ceeEEEecccCchhhhhhhhccC--CCeEEEEeecCCCCCchhhHhc-cCcccccccccccCCCCCCccccccccCcccc
Q 005417 545 MVRNVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 545 ~iRnvmDm~~g~g~Faaal~~~~--~~vwvmnv~p~~~~~~l~~i~~-RGlig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
...+|||+|||.|.++.+|.+.. ..+.+.-+ | ..+..+-+ .++-=+.+|..+++| . ||+|.+..++..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~p---~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFTSIP---N-ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTTCCC---C-CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H----HHHhhcccCCCcEEEeccccCCCC---C-ccEEEeehhhcc
Confidence 45799999999999999998631 12333333 2 11111111 123223455555444 3 999999999988
Q ss_pred ccCCCCCCCcchhhhhhcccccC---CcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRP---EGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP---~G~~i~~d 652 (697)
|.. . ....+|-++-|+||| ||.++|.|
T Consensus 259 ~~d--~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTD--K--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCH--H--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCH--H--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 862 1 223789999999999 99999864
No 469
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.59 E-value=0.019 Score=60.14 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=64.4
Q ss_pred CEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHH---HHHcCCC-cEEEee-cccCCCCCCCCccEEEecccccc
Q 005417 285 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQL---TLERGLP-AMIGSF-ASKQLPYPSLSFDMLHCARCGVD 359 (697)
Q Consensus 285 ~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~---A~ergl~-~~~~~~-da~~LPfpd~sFDlV~~~~~llh 359 (697)
.+||||||++|.++.+.+... ....|.|+|+...--+. .++.+-+ +.+... |...++- ..+|+|+|--. .
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig--e 170 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG--E 170 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC--C
T ss_pred CEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc--c
Confidence 699999999999999887663 34579999987541100 0011111 333333 4445543 56999999754 2
Q ss_pred ccccHH-------HHHHHHHHhccCC-eEEEEEeCCCCh
Q 005417 360 WDQKDG-------ILLLEVDRVLKPG-GYFVWTSPLTNP 390 (697)
Q Consensus 360 ~~~d~~-------~~L~El~RvLKPG-G~Lvis~p~~~~ 390 (697)
-.+++. .+|.-+.+.|++| |-|++-...+..
T Consensus 171 Ss~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~ 209 (321)
T 3lkz_A 171 SSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM 209 (321)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS
T ss_pred CCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC
Confidence 223321 2566668899999 999998877644
No 470
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.59 E-value=0.00059 Score=67.48 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=53.5
Q ss_pred EEEecccCchhhhhhhhccCCCe---EEEEeecCCCC-CchhhHhcc----C--------cccccccccccCCCCCCccc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSV---WVMNVVPTIGT-NHLPMILDR----G--------FVGVLHDWCEAFPTYPRTYD 611 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~v---wvmnv~p~~~~-~~l~~i~~R----G--------lig~~~~~~e~f~typrtyD 611 (697)
.|||+|||.|.+++.|.+.-... +.-.|+-+|-. ..+..+-++ | +--+..|..+.++. ..+||
T Consensus 87 ~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD 165 (227)
T 1r18_A 87 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPYN 165 (227)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSEE
T ss_pred EEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCcc
Confidence 79999999999999987620000 00022223322 233332221 1 11123344444432 25899
Q ss_pred cccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 612 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 612 l~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+|++...+. .++-++-|+|+|||.+++.-
T Consensus 166 ~I~~~~~~~------------~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 166 AIHVGAAAP------------DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp EEEECSCBS------------SCCHHHHHTEEEEEEEEEEE
T ss_pred EEEECCchH------------HHHHHHHHHhcCCCEEEEEE
Confidence 999865543 34568889999999999863
No 471
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.57 E-value=0.00045 Score=65.35 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=55.8
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHh----ccCc---cc-ccccccccCCCC---CCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGF---VG-VLHDWCEAFPTY---PRTYDLVH 614 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~----~RGl---ig-~~~~~~e~f~ty---prtyDl~H 614 (697)
.+|||+|||.|.++.++++. +. -+|+-+|-. ..+..+- ..|+ +- +..|+.+..+.. +.+||+|-
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~--~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSR--GM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHT--TC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEeCCccCHHHHHHHHc--CC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 48999999999999988762 21 123333332 3333222 2233 11 223444432211 36899999
Q ss_pred ccCccccccCCCCCCCcchhhhhh--cccccCCcEEEEEc
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRD 652 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~--dRiLRP~G~~i~~d 652 (697)
++..|... ....++-++ -|+|+|||++++..
T Consensus 122 ~~~~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 122 LDPPYAKQ-------EIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp ECCCGGGC-------CHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ECCCCCch-------hHHHHHHHHHHhcccCCCCEEEEEe
Confidence 97765421 123445555 99999999999964
No 472
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.51 E-value=0.00049 Score=73.12 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=60.2
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcccccccccccCCCCCCccccccccCccccc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 622 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGlig~~~~~~e~f~typrtyDl~H~~~~~~~~ 622 (697)
+|||+|||.|.++.+|.+.. +-+ +|+-+|.. .-+..+-+ .|+-..+ -+...++.-+.+||+|-++..|..-
T Consensus 199 ~VLDlGcG~G~~~~~la~~~-~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHS-PKI--RLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHC-TTC--BCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCSS
T ss_pred eEEEecCccCHHHHHHHHHC-CCC--EEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCcccC
Confidence 69999999999999998632 111 23333432 22333222 2432111 1222233225899999998887631
Q ss_pred cCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 623 SGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 623 ~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.. .+.-....++-|+-|+|+|||.+++-.
T Consensus 275 ~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 275 MQ-TSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SH-HHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cc-CCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 10 011234578999999999999999864
No 473
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.49 E-value=0.0025 Score=68.05 Aligned_cols=138 Identities=9% Similarity=0.028 Sum_probs=88.1
Q ss_pred CCCceeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhc---cC----cccccccccccCCCCCCcccccc
Q 005417 542 PYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD---RG----FVGVLHDWCEAFPTYPRTYDLVH 614 (697)
Q Consensus 542 ~~~~iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~---RG----lig~~~~~~e~f~typrtyDl~H 614 (697)
++...+.|+|+|||.|.++.+|++. .|=+. ++-.|-+..+..+-+ .+ +-=+-||.-+. -+-.+|++.
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~-~p~~~--~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~---~~~~~D~~~ 249 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSL-YPGCK--ITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD---PLPEADLYI 249 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHH-CSSCE--EEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS---CCCCCSEEE
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHh-CCCce--eEeccCHHHHHHHHHhhhhcccCceeeecCccccC---CCCCceEEE
Confidence 4567899999999999999999974 44332 222333333332221 12 11123443221 123589999
Q ss_pred ccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH--------------H------------HHHHHHHHHhhcC
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------------R------------LIESARALTTRLK 668 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~--------------~------------~~~~~~~~~~~~~ 668 (697)
+.+++..|.. ..| ..||-++=|.|+|||.++|-|.. + ..++.+++++.--
T Consensus 250 ~~~vlh~~~d--~~~--~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AG 325 (353)
T 4a6d_A 250 LARVLHDWAD--GKC--SHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAG 325 (353)
T ss_dssp EESSGGGSCH--HHH--HHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT
T ss_pred eeeecccCCH--HHH--HHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 9999998863 233 36899999999999999996531 1 1356677777777
Q ss_pred ceeEEeeeccCCCccEEEEEcc
Q 005417 669 WDARVIEIESNSDERLLICQKP 690 (697)
Q Consensus 669 W~~~~~~~e~~~~~~~li~~K~ 690 (697)
|+...+. ..++...+++++|.
T Consensus 326 f~~v~v~-~~~~~~~~i~ArKg 346 (353)
T 4a6d_A 326 FRDFQFK-KTGAIYDAILARKG 346 (353)
T ss_dssp CEEEEEE-CCSSSCEEEEEECC
T ss_pred CceEEEE-EcCCceEEEEEEec
Confidence 8755432 23445678999985
No 474
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.48 E-value=0.0036 Score=65.64 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=71.1
Q ss_pred eEEEeccc------Cchh-hhhhhhccCCCeEEEEeecCCCCCchhhHhccCccc-ccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNA------HFGG-FNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVG-VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~------g~g~-Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~RGlig-~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
..|||+|| |.|+ .+|.++..+..|.-+-+.|. + + ++-= +..|+.+. + ++.+||+|.++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v----~-~v~~~i~gD~~~~-~-~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V----S-DADSTLIGDCATV-H-TANKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B----C-SSSEEEESCGGGC-C-CSSCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C----C-CCEEEEECccccC-C-ccCcccEEEEcCC
Confidence 36999999 5576 23333321123444444443 1 1 3322 45566552 2 2478999998643
Q ss_pred ccc---c--cCCCCCCCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhhcCc-eeEEeeeccCCCccEEEEEc
Q 005417 619 LSL---E--SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKW-DARVIEIESNSDERLLICQK 689 (697)
Q Consensus 619 ~~~---~--~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~~~W-~~~~~~~e~~~~~~~li~~K 689 (697)
... + ...+..-.+..++-|+-|+|||||.|++..- ....+++.++.+...| .+...-....+.|-+++++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCC
Confidence 211 0 0000111123678899999999999998541 1223466667777644 44444222334577887765
No 475
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.48 E-value=0.0019 Score=68.07 Aligned_cols=91 Identities=18% Similarity=0.113 Sum_probs=51.2
Q ss_pred eEEEecccCchhhhhhhhcc-C--CCeEEEEeecCCCC-CchhhHhcc------------------CcccccccccccCC
Q 005417 547 RNVLDMNAHFGGFNSALLEK-G--KSVWVMNVVPTIGT-NHLPMILDR------------------GFVGVLHDWCEAFP 604 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~-~--~~vwvmnv~p~~~~-~~l~~i~~R------------------Glig~~~~~~e~f~ 604 (697)
.+|||+|||.|.++.+|... + ..|.. +|-. ..+..+-++ .+-=+..|..+...
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~-----vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVIS-----FEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEE-----EESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEE-----EeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 48999999999999999863 1 22332 2322 233332221 11112234444322
Q ss_pred CCC-CccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 605 TYP-RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 605 typ-rtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
.++ .+||+|.++. .. -..++-++-|+|+|||.+++...
T Consensus 182 ~~~~~~fD~V~~~~-~~----------~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 182 DIKSLTFDAVALDM-LN----------PHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ------EEEEEECS-SS----------TTTTHHHHGGGEEEEEEEEEEES
T ss_pred ccCCCCeeEEEECC-CC----------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 233 5899998832 11 12378889999999999998643
No 476
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.48 E-value=0.0008 Score=67.64 Aligned_cols=47 Identities=9% Similarity=0.094 Sum_probs=31.4
Q ss_pred CccccccccCccccccCCCC---CCCcchhhhhhcccccCCcEEEEEcCH
Q 005417 608 RTYDLVHAEGLLSLESGHRH---RCSTLDIFTEIDRILRPEGWVIIRDTA 654 (697)
Q Consensus 608 rtyDl~H~~~~~~~~~~~~~---~c~~~~~l~E~dRiLRP~G~~i~~d~~ 654 (697)
.+||+|-|+-.|.......+ .-....++-++-|+|+|||++++.+..
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 48999999765543220000 122336788999999999999996544
No 477
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.47 E-value=0.00076 Score=71.76 Aligned_cols=95 Identities=20% Similarity=0.220 Sum_probs=61.7
Q ss_pred ceeEEEecccCchhhhhhhhccCCC--eEEEEeecCCCCCchhhHhc-cCcccccccccccCCCCCCccccccccCcccc
Q 005417 545 MVRNVLDMNAHFGGFNSALLEKGKS--VWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 545 ~iRnvmDm~~g~g~Faaal~~~~~~--vwvmnv~p~~~~~~l~~i~~-RGlig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
...+|+|+|||.|.++.+|++.... +.+.-+ | ..+..+-+ .++--+-+|..+++| .||+|.+..++..
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~~----~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P----QVVGNLTGNENLNFVGGDMFKSIP----SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H----HHHSSCCCCSSEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H----HHHhhcccCCCcEEEeCccCCCCC----CceEEEEcccccC
Confidence 4579999999999999999874212 222222 1 11111111 123233455555444 3999999999988
Q ss_pred ccCCCCCCCcchhhhhhcccccC---CcEEEEEc
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRP---EGWVIIRD 652 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP---~G~~i~~d 652 (697)
|.. ..| ..+|-++-|+|+| ||.++|-|
T Consensus 264 ~~d--~~~--~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 264 WND--EQS--LKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCH--HHH--HHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred CCH--HHH--HHHHHHHHHhCCCCCCCcEEEEEE
Confidence 762 122 3789999999999 99999853
No 478
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.46 E-value=0.0026 Score=63.15 Aligned_cols=131 Identities=14% Similarity=0.194 Sum_probs=68.4
Q ss_pred eEEEecccCchhhhhhhhccC--CCeEEEEeecCCCCCchhhHhcc-----CcccccccccccC--CCCCCccccccccC
Q 005417 547 RNVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGTNHLPMILDR-----GFVGVLHDWCEAF--PTYPRTYDLVHAEG 617 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~--~~vwvmnv~p~~~~~~l~~i~~R-----Glig~~~~~~e~f--~typrtyDl~H~~~ 617 (697)
.+|||+|||.|.++.+|.+.- ..|..+-+.| ..+..+-++ .+.-+..|..++. ..++.+||+|.++
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAP----RIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC-
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH----HHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe-
Confidence 479999999999999998631 2233333332 222211111 1222223333211 1223689997631
Q ss_pred ccccccCCCCCCCcchhhhhhcccccCCcEEEEE----cCH------H-HHHHHHHHHhhcCceeEEe-eeccC-CCccE
Q 005417 618 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR----DTA------R-LIESARALTTRLKWDARVI-EIESN-SDERL 684 (697)
Q Consensus 618 ~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~----d~~------~-~~~~~~~~~~~~~W~~~~~-~~e~~-~~~~~ 684 (697)
+ . ..-....+|-++-|+|+|||++++. ... . .-++++ ++....++.... +.+.- .+.-+
T Consensus 151 -~---~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~ 222 (230)
T 1fbn_A 151 -V---A---QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVM 222 (230)
T ss_dssp -C---C---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEE
T ss_pred -c---C---ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEE
Confidence 1 1 1111245789999999999999993 211 1 124555 555555654432 22221 12456
Q ss_pred EEEEcc
Q 005417 685 LICQKP 690 (697)
Q Consensus 685 li~~K~ 690 (697)
++++|+
T Consensus 223 v~~~k~ 228 (230)
T 1fbn_A 223 FVGIWE 228 (230)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 777764
No 479
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.44 E-value=0.003 Score=64.10 Aligned_cols=108 Identities=16% Similarity=0.215 Sum_probs=63.5
Q ss_pred EEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc-----C-c---c-ccccccccc-CCCCCCccccccc
Q 005417 548 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----G-F---V-GVLHDWCEA-FPTYPRTYDLVHA 615 (697)
Q Consensus 548 nvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R-----G-l---i-g~~~~~~e~-f~typrtyDl~H~ 615 (697)
+|||+|||.|.++.+|.+.-.+- .+|+-+|-. ..+..+-++ | + + -+..|..+. ++ +.+||+|-+
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~--~~~~D~v~~ 177 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAVGPA--GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP--DGSVDRAVL 177 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC--TTCEEEEEE
T ss_pred EEEEEcccccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC--CCceeEEEE
Confidence 79999999999999998620010 134444443 444444333 3 2 1 122344333 22 368999987
Q ss_pred cCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-HHHHHHHHHHHhh-cCce
Q 005417 616 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTR-LKWD 670 (697)
Q Consensus 616 ~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-~~~~~~~~~~~~~-~~W~ 670 (697)
+. -....+|-++-|+|+|||++++... .+.+.++...... ..|.
T Consensus 178 ~~-----------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 178 DM-----------LAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp ES-----------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred CC-----------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 21 1233689999999999999999653 3444444443333 4443
No 480
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.40 E-value=0.00074 Score=66.49 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=53.7
Q ss_pred eEEEecccCchhhhhhhhccCC----CeEEEEeecCCCC-CchhhHhcc----Cc-------c-cccccccccCC---CC
Q 005417 547 RNVLDMNAHFGGFNSALLEKGK----SVWVMNVVPTIGT-NHLPMILDR----GF-------V-GVLHDWCEAFP---TY 606 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~----~vwvmnv~p~~~~-~~l~~i~~R----Gl-------i-g~~~~~~e~f~---ty 606 (697)
.+|||+|||.|.+++.|.+... +-. +|+-+|-. ..+..+-++ |+ + -+..|..+.++ .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNS--YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTC--EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCC--EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 4899999999999999986321 100 22333332 333333222 31 1 12223333210 11
Q ss_pred CCccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 607 PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 607 prtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+.+||+|++...+. .++-++-++|+|||.+++.-
T Consensus 160 ~~~fD~I~~~~~~~------------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASAS------------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBS------------SCCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchH------------HHHHHHHHhcCCCcEEEEEE
Confidence 36799999865543 35678889999999999863
No 481
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=96.39 E-value=0.002 Score=66.45 Aligned_cols=99 Identities=11% Similarity=0.001 Sum_probs=61.4
Q ss_pred ceeEEEecccCc---hhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----C-ccccccccc------------ccC
Q 005417 545 MVRNVLDMNAHF---GGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G-FVGVLHDWC------------EAF 603 (697)
Q Consensus 545 ~iRnvmDm~~g~---g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----G-lig~~~~~~------------e~f 603 (697)
.++.|||+|||. |.++..+... .|= ..|+=+|-. ..|..+-++ + +-=+..|.. +.|
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~--~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPD--ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTT--CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCC--CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 478999999999 9887655431 111 134444432 333333222 1 111112222 123
Q ss_pred CCCCCccccccccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 604 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 604 ~typrtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
+. .+||+|-+..++..+. +. ....+|-|+-|+|+|||++++.+
T Consensus 154 d~--~~~d~v~~~~vlh~~~---d~-~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 154 DF--SRPAAIMLVGMLHYLS---PD-VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CT--TSCCEEEETTTGGGSC---TT-THHHHHHHHHHHSCTTCEEEEEE
T ss_pred CC--CCCEEEEEechhhhCC---cH-HHHHHHHHHHHhCCCCcEEEEEE
Confidence 32 4799999988888775 33 56789999999999999999975
No 482
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.38 E-value=0.0016 Score=63.65 Aligned_cols=97 Identities=9% Similarity=0.011 Sum_probs=57.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--cc-ccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig-~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++..++.... -.|+-+|-. ..+..+-+ .|+ +- +..|..+..+.-+.+||+|-++..
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~----~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA----AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC----SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CeEEEeCCCcCHHHHHHHhcCC----CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 4799999999999998665321 145555544 34443322 333 21 223333323333468999988766
Q ss_pred cccccCCCCCCCcchhhhhh--cccccCCcEEEEEcCH
Q 005417 619 LSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDTA 654 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~--dRiLRP~G~~i~~d~~ 654 (697)
|.. -....++-++ -|+|+|||.+++....
T Consensus 132 ~~~-------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 FRR-------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SST-------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCC-------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 431 1223455556 4679999999997544
No 483
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.35 E-value=0.0056 Score=63.08 Aligned_cols=100 Identities=19% Similarity=0.239 Sum_probs=57.9
Q ss_pred CCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHH--HHHHHHH-cCCCcE-EEee-cccCCCCCCCCccEEEeccccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGS--QVQLTLE-RGLPAM-IGSF-ASKQLPYPSLSFDMLHCARCGV 358 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~--ml~~A~e-rgl~~~-~~~~-da~~LPfpd~sFDlV~~~~~ll 358 (697)
..+|||+||++|.++.+.++.- ....+.|.++... +...... .|+.+. +.++ |...+ +...+|+|+|-.+ -
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~-~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLSDMA-P 149 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMK-NVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYK--PSEISDTLLCDIG-E 149 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTST-TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGS--CCCCCSEEEECCC-C
T ss_pred CCEEEEcCCCCCHHHHHHhhhc-CCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCC--CCCCCCEEEeCCC-C
Confidence 4899999999999999998861 1223333333221 0000000 122222 2224 65553 3458999999754 2
Q ss_pred cccccH----H---HHHHHHHHhccCCe-EEEEEeCCC
Q 005417 359 DWDQKD----G---ILLLEVDRVLKPGG-YFVWTSPLT 388 (697)
Q Consensus 359 h~~~d~----~---~~L~El~RvLKPGG-~Lvis~p~~ 388 (697)
. .... . .+|.-+.++|+||| .|++-.+..
T Consensus 150 n-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 150 S-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred C-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 2 2111 1 25666678999999 999877753
No 484
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.29 E-value=0.0048 Score=72.96 Aligned_cols=99 Identities=10% Similarity=0.130 Sum_probs=62.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----------cCc--ccccccccccCCCCCCccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----------RGF--VGVLHDWCEAFPTYPRTYDLV 613 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----------RGl--ig~~~~~~e~f~typrtyDl~ 613 (697)
..|||+|||.|.++.+|.+...+. -.|+=+|-. ..+..+-+ .|+ |-+++.=-+.++..+.+||+|
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~--a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSL--QTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCC--CEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC--CeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 579999999999999998742111 123334433 44444433 244 222222123345445899999
Q ss_pred cccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEc
Q 005417 614 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 652 (697)
Q Consensus 614 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d 652 (697)
.|..++.+.. + -....++-|+-|+|||| ++|+..
T Consensus 801 V~~eVLeHL~---d-p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 801 TCLEVIEHME---E-DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEESCGGGSC---H-HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEeCchhhCC---h-HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 9999988765 1 11234778999999999 777754
No 485
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.27 E-value=0.0024 Score=67.16 Aligned_cols=121 Identities=13% Similarity=0.042 Sum_probs=64.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cc--cccc-ccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VGVL-HDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Gl--ig~~-~~~~e~f~typrtyDl~H~~~~ 618 (697)
..|||||||.|+++.+|.+.-.+- -.|+-.|-. ..+..+-++ |+ +-+. +|. +.++.++.+||+|-++--
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEEECC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEEeCC
Confidence 379999999999999988521110 123444443 344444333 44 2222 222 223334578999997533
Q ss_pred cccccCCCCC---------CC-------cchhhhhhcccccCCcEEEEEcC----HHHHHHHHHHHhhcCce
Q 005417 619 LSLESGHRHR---------CS-------TLDIFTEIDRILRPEGWVIIRDT----ARLIESARALTTRLKWD 670 (697)
Q Consensus 619 ~~~~~~~~~~---------c~-------~~~~l~E~dRiLRP~G~~i~~d~----~~~~~~~~~~~~~~~W~ 670 (697)
.|....-++. .. -..+|-++-|+|||||.+++..- .+.-+.++.+++...++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 2211000000 00 03688889999999999999521 12223344555554443
No 486
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.23 E-value=0.00098 Score=69.93 Aligned_cols=93 Identities=16% Similarity=0.054 Sum_probs=57.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc----Cccc---ccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG---VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R----Glig---~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.++..|.+.... .-+|+-+|-. ..+..+-++ |+-. +..|..+..+ -+.+||+|.+...
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGE--KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTVG 153 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECSB
T ss_pred CEEEEecCCchHHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcCC
Confidence 37999999999999999863222 0013333332 445444443 5422 2234433222 1368999999777
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcCH
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 654 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~~ 654 (697)
+.+.. -++-|+|+|||.+++....
T Consensus 154 ~~~~~------------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 154 VDEVP------------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BSCCC------------HHHHHHEEEEEEEEEEBCB
T ss_pred HHHHH------------HHHHHhcCCCcEEEEEECC
Confidence 65432 4678899999999997543
No 487
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.13 E-value=0.0088 Score=57.70 Aligned_cols=116 Identities=9% Similarity=0.044 Sum_probs=70.3
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcccccccccccCCCCCCccccccccCcccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 621 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGlig~~~~~~e~f~typrtyDl~H~~~~~~~ 621 (697)
.+|||+|||.|.|+.+|.+.+.. +|+-+|-. ..+..+-+ .|+ . ..-.+..+..+|.+||+|-++..|..
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~-~-~~~~~~d~~~~~~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK----EVICVEVDKEAVDVLIENLGEFKG-K-FKVFIGDVSEFNSRVDIVIMNPPFGS 124 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHTGGGTT-S-EEEEESCGGGCCCCCSEEEECCCCSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHHHHHcCC-C-EEEEECchHHcCCCCCEEEEcCCCcc
Confidence 47999999999999999873211 23333432 33333322 232 1 11112222234568999999887765
Q ss_pred ccCCCCCCCcchhhhhhcccccCCcEEEEE-cCHHHHHHHHHHHhhcCceeEEe
Q 005417 622 ESGHRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDARVI 674 (697)
Q Consensus 622 ~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~-d~~~~~~~~~~~~~~~~W~~~~~ 674 (697)
.. . -....++-++-|+| ||.+++. ......+.+.+++....|++...
T Consensus 125 ~~---~-~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 125 QR---K-HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp SS---T-TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEE
T ss_pred cc---C-CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 53 2 12235666777888 6655554 36677788888888888877654
No 488
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.12 E-value=0.0011 Score=66.10 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=54.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCccc---ccccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVG---VLHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGlig---~~~~~~e~f~typrtyDl~H~~~~ 618 (697)
.+|||+|||.|.+++.|.+.. + .+|+-+|-. ..+..+-+ .|+-. +..|..++++. ...||+|.++..
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~-~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIV-K---TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAPYDVIIVTAG 167 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHH-C---SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEECSB
T ss_pred CEEEEEeCCcCHHHHHHHHHh-C---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC-CCCccEEEECCc
Confidence 479999999999999998632 1 133333322 33333333 23311 22333334432 124999998766
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEEEcC
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 653 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~ 653 (697)
+... .-++-|+|+|||.+++.-.
T Consensus 168 ~~~~------------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 168 APKI------------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp BSSC------------CHHHHHTEEEEEEEEEEEC
T ss_pred HHHH------------HHHHHHhcCCCcEEEEEEe
Confidence 5433 3378899999999998643
No 489
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.06 E-value=0.014 Score=61.03 Aligned_cols=54 Identities=7% Similarity=0.105 Sum_probs=43.9
Q ss_pred hhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhcCCceeEEEEecCCHHHHHHHHH
Q 005417 262 DYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE 326 (697)
Q Consensus 262 ~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~g~~~~sV~gvD~S~~ml~~A~e 326 (697)
-..+.+.+.+...++ ..+||.+||.|..+..++++ ...|+|+|.++.+++.|++
T Consensus 9 VLl~e~le~L~~~~g--------g~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 9 VLYQEALDLLAVRPG--------GVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TTHHHHHHHHTCCTT--------CEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCC--------CEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh
Confidence 345566666665444 79999999999999999987 3579999999999999876
No 490
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.06 E-value=0.0068 Score=63.22 Aligned_cols=141 Identities=14% Similarity=0.104 Sum_probs=72.2
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc------Cc----cc-ccccccccCCCCCCcccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GF----VG-VLHDWCEAFPTYPRTYDLVH 614 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R------Gl----ig-~~~~~~e~f~typrtyDl~H 614 (697)
++|||+|||.|+++.+|++. .++. +|+-+|-. .-+.++-++ |+ +- +..|..+..+..+.+||+|-
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~-~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKH-DSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTS-TTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhc-CCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 68999999999999999862 2332 23333322 222222211 11 11 12232222233357899999
Q ss_pred ccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-----HHHHHHHHHHHhhcCceeEEeeec----cCCCccEE
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEIE----SNSDERLL 685 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~e----~~~~~~~l 685 (697)
++. +..+.+....-....++-++-|+|+|||.+++... .+....+.+..++.--.+...... .++...++
T Consensus 169 ~d~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 247 (296)
T 1inl_A 169 IDS-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYT 247 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEE
T ss_pred EcC-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEE
Confidence 753 22211100011124678899999999999999732 233344333333333344433211 12345578
Q ss_pred EEEccc
Q 005417 686 ICQKPF 691 (697)
Q Consensus 686 i~~K~~ 691 (697)
+|.|.+
T Consensus 248 ~as~~~ 253 (296)
T 1inl_A 248 FASKGI 253 (296)
T ss_dssp EEESSC
T ss_pred EecCCC
Confidence 888863
No 491
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.04 E-value=0.011 Score=61.08 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=74.3
Q ss_pred eeEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhhHhcc------Cc----ccc-cccccccCCCCCCcccccc
Q 005417 546 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR------GF----VGV-LHDWCEAFPTYPRTYDLVH 614 (697)
Q Consensus 546 iRnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~i~~R------Gl----ig~-~~~~~e~f~typrtyDl~H 614 (697)
-++|||+|||.|+++..+++. .++-.+-+|=.+. .-+.++-+. ++ +-+ ..|-.+-.+..+.+||+|-
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~-~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDG-KVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCH-HHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhC-CCCceEEEEECCH-HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 478999999999999999862 2332222222221 222222111 11 111 1122111222357899999
Q ss_pred ccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-----HHHHHHHHHHHhhcCceeEEeeec--c--CCCccEE
Q 005417 615 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEIE--S--NSDERLL 685 (697)
Q Consensus 615 ~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~e--~--~~~~~~l 685 (697)
++... .+.. ....-...++-++-|+|+|||.+++... .+.+..+.+..++.=-.+...... . ++.-.++
T Consensus 154 ~d~~~-~~~~-~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~ 231 (275)
T 1iy9_A 154 VDSTE-PVGP-AVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFT 231 (275)
T ss_dssp ESCSS-CCSC-CCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEE
T ss_pred ECCCC-CCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEE
Confidence 85432 2210 0111124678899999999999999732 344455544444443334433221 1 2234577
Q ss_pred EEEccc
Q 005417 686 ICQKPF 691 (697)
Q Consensus 686 i~~K~~ 691 (697)
++.|.+
T Consensus 232 ~ask~~ 237 (275)
T 1iy9_A 232 IGSKKY 237 (275)
T ss_dssp EEESSC
T ss_pred EeeCCC
Confidence 888863
No 492
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.03 E-value=0.028 Score=63.49 Aligned_cols=119 Identities=21% Similarity=0.192 Sum_probs=76.1
Q ss_pred hhhHHHHHHHHhccccccccccCCCEEEEeCCCCchHHHHHhhc----CC--------ceeEEEEecCCHHHHHHHHH--
Q 005417 261 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSK----EL--------LTMCIANYEASGSQVQLTLE-- 326 (697)
Q Consensus 261 ~~y~~~l~~lL~l~~~~~l~~~~~~~VLDIGCGtG~~a~~La~~----g~--------~~~sV~gvD~S~~ml~~A~e-- 326 (697)
....+.+.+++.... ..+|+|-.||+|.|.....++ .. ....+.|.|..+.+...|+.
T Consensus 203 ~~Vv~lmv~l~~p~~--------~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 203 RPVVRFMVEVMDPQL--------GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp HHHHHHHHHHHCCCT--------TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCC--------CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 344555666654333 378999999999998765442 10 12468999999999888864
Q ss_pred --cCCC-cEEEeecccCCCC----CCCCccEEEeccccc-ccc-------------ccH-HHHHHHHHHhcc-------C
Q 005417 327 --RGLP-AMIGSFASKQLPY----PSLSFDMLHCARCGV-DWD-------------QKD-GILLLEVDRVLK-------P 377 (697)
Q Consensus 327 --rgl~-~~~~~~da~~LPf----pd~sFDlV~~~~~ll-h~~-------------~d~-~~~L~El~RvLK-------P 377 (697)
+|+. ..+...|....|+ +...||+|+++--+- .+. .+. -.++..+.+.|| |
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 3443 3455556544442 235799999985421 110 111 235677778886 7
Q ss_pred CeEEEEEeCC
Q 005417 378 GGYFVWTSPL 387 (697)
Q Consensus 378 GG~Lvis~p~ 387 (697)
||++.+..|.
T Consensus 355 gGr~avVlP~ 364 (530)
T 3ufb_A 355 GGRAAVVVPN 364 (530)
T ss_dssp CCEEEEEEEH
T ss_pred CceEEEEecc
Confidence 9999998873
No 493
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.02 E-value=0.0029 Score=68.29 Aligned_cols=124 Identities=17% Similarity=0.165 Sum_probs=70.5
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc--cccc-ccccccCCCC---CCccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVL-HDWCEAFPTY---PRTYDLVHA 615 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig~~-~~~~e~f~ty---prtyDl~H~ 615 (697)
.+|||++||.|+|+.+|... .-+|+-+|.. ..+..+-+ .|+ +-++ .|..+.++.. +.+||+|.+
T Consensus 211 ~~VLDlg~G~G~~~~~la~~-----~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG-----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH-----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeeccCHHHHHHHHh-----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 57999999999999999862 3455555543 33333322 243 1111 1222211211 468999998
Q ss_pred cCccccccCCC---CCCCcchhhhhhcccccCCcEEEEEcCH------HHHHHHHHHHhhcCceeEEee
Q 005417 616 EGLLSLESGHR---HRCSTLDIFTEIDRILRPEGWVIIRDTA------RLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 616 ~~~~~~~~~~~---~~c~~~~~l~E~dRiLRP~G~~i~~d~~------~~~~~~~~~~~~~~W~~~~~~ 675 (697)
+--........ ..-....++.++-|+|+|||++++.... ...+.+++.+.....+..+.+
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 65322111000 0012346888999999999999997432 234555556666665555543
No 494
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=95.94 E-value=0.0023 Score=71.61 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=58.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCCCchhh----HhccCc---ccc-cccccccCCCCCCccccccccCc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGV-LHDWCEAFPTYPRTYDLVHAEGL 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~~~l~~----i~~RGl---ig~-~~~~~e~f~typrtyDl~H~~~~ 618 (697)
..|||+|||.|.++..|.+. +.. .|+-+|....+.. +.+.|+ |-+ ..|+.+ + .+|..||+|-+..+
T Consensus 160 ~~VLDiGcGtG~la~~la~~--~~~--~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQA--GAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPM 233 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHT--TCS--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCC
T ss_pred CEEEEecCcccHHHHHHHHc--CCC--EEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCc
Confidence 48999999999999988763 211 2222332222222 233455 222 233333 2 24578999999777
Q ss_pred cccccCCCCCCCcchhhhhhcccccCCcEEEE
Q 005417 619 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 650 (697)
Q Consensus 619 ~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~ 650 (697)
+..+. .-.+...+.++-|+|+|||++++
T Consensus 234 ~~~~~----~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLF----NERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHT----CHHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcC----cHHHHHHHHHHHHhcCCCCEEEE
Confidence 55543 12345677799999999999985
No 495
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=95.94 E-value=0.006 Score=64.79 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=72.1
Q ss_pred eEEEecccCchhhhhhhhccC---CCeEEEEeecCCCC-CchhhHhc----cCc--ccccccccccCCCCCCcccccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKG---KSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPTYPRTYDLVHAE 616 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~---~~vwvmnv~p~~~~-~~l~~i~~----RGl--ig~~~~~~e~f~typrtyDl~H~~ 616 (697)
..|||++||.|+|+..+.... ..|. =.|-. ..+..+-+ .|+ |-+.+.=.+.++.....||+|-++
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~-----g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~n 279 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVY-----AGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILAN 279 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEE-----EEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEEC
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEE-----EEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEEC
Confidence 579999999999987766521 2232 22322 33333222 343 222211112233323568999997
Q ss_pred CccccccCCCCCCC----cchhhhhhcccccCCcEEEEEcCHHHHHHHHHHHhhcCceeEEee-eccCC-CccEEEEEc
Q 005417 617 GLLSLESGHRHRCS----TLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIE-IESNS-DERLLICQK 689 (697)
Q Consensus 617 ~~~~~~~~~~~~c~----~~~~l~E~dRiLRP~G~~i~~d~~~~~~~~~~~~~~~~W~~~~~~-~e~~~-~~~~li~~K 689 (697)
--|..-.. ..-. ...++-++-|+|+|||.+++-..... -++++.+ ..|+..... ..++. .-.+.+++|
T Consensus 280 pPyg~r~~--~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l~~~i~vl~r 353 (354)
T 3tma_A 280 PPHGLRLG--RKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGVYPRVFVLEK 353 (354)
T ss_dssp CCSCC------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTBCCEEEEEEE
T ss_pred CCCcCccC--CcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCEEEEEEEEEc
Confidence 65532110 1111 14678899999999999988644322 2345555 777765432 23444 346677665
No 496
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.93 E-value=0.003 Score=65.08 Aligned_cols=118 Identities=14% Similarity=0.077 Sum_probs=66.0
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCC-C-CchhhHhc---------cCc-------c-cccccccccCCCC-
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIG-T-NHLPMILD---------RGF-------V-GVLHDWCEAFPTY- 606 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~-~-~~l~~i~~---------RGl-------i-g~~~~~~e~f~ty- 606 (697)
.+|||+|||.|.++.+|...+. -.|+-+|- . ..+..+-+ .|+ + -...+|.......
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~----~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA----DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC----SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 4799999999999988876322 12333443 1 33333222 222 1 1225576543222
Q ss_pred ----CCccccccccCccccccCCCCCCCcchhhhhhccccc---C--CcEEEE--EcCH----HHHHHHHHHHhhcC-ce
Q 005417 607 ----PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILR---P--EGWVII--RDTA----RLIESARALTTRLK-WD 670 (697)
Q Consensus 607 ----prtyDl~H~~~~~~~~~~~~~~c~~~~~l~E~dRiLR---P--~G~~i~--~d~~----~~~~~~~~~~~~~~-W~ 670 (697)
+.+||+|-++.++-.. -....++-++.|+|+ | ||.+++ .... +...++.+.++... |+
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~ 230 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH------QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALI 230 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG------GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEE
T ss_pred hhccCCCCCEEEEeCcccCh------HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEE
Confidence 3789999886665432 235578899999999 9 996544 3211 11233444455555 65
Q ss_pred eEEe
Q 005417 671 ARVI 674 (697)
Q Consensus 671 ~~~~ 674 (697)
+...
T Consensus 231 v~~~ 234 (281)
T 3bzb_A 231 AEPW 234 (281)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5443
No 497
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.92 E-value=0.0061 Score=63.76 Aligned_cols=139 Identities=16% Similarity=0.158 Sum_probs=73.7
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhcc------Cc----cc-ccccccccCCC-CCCccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GF----VG-VLHDWCEAFPT-YPRTYDLV 613 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~R------Gl----ig-~~~~~~e~f~t-yprtyDl~ 613 (697)
++|||+|||.|+++..|++. .++- .|+-+|-. .-+.++-++ ++ +- +..|..+-... -+.+||+|
T Consensus 97 ~~VLdiG~G~G~~~~~l~~~-~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVLRH-GTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CEEEEEECTTSHHHHHHHTC-TTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CeEEEEcCCCCHHHHHHHhC-CCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 68999999999999999862 2322 22222222 222222211 11 11 12233221111 24789999
Q ss_pred cccCccccccCCCCCCCcchhhhhhcccccCCcEEEEEcC-----HHHHHHHHHHHhhcCceeE-Eeeec--c--CCCcc
Q 005417 614 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDAR-VIEIE--S--NSDER 683 (697)
Q Consensus 614 H~~~~~~~~~~~~~~c~~~~~l~E~dRiLRP~G~~i~~d~-----~~~~~~~~~~~~~~~W~~~-~~~~e--~--~~~~~ 683 (697)
-++........ ...--..++-++-|+|+|||.+++... ....+++.+..+...+... ..... + ++.-.
T Consensus 174 i~d~~~~~~~~--~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~ 251 (304)
T 3bwc_A 174 IIDTTDPAGPA--SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIG 251 (304)
T ss_dssp EEECC-----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCE
T ss_pred EECCCCccccc--hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceE
Confidence 98644322110 111114678899999999999999632 2455666666666655433 33211 1 22345
Q ss_pred EEEEEcc
Q 005417 684 LLICQKP 690 (697)
Q Consensus 684 ~li~~K~ 690 (697)
++++.|.
T Consensus 252 f~~as~~ 258 (304)
T 3bwc_A 252 TLVCSKK 258 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 7888875
No 498
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.92 E-value=0.0028 Score=67.46 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=67.4
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCc----cccc-ccccccCCCC---CCccccc
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF----VGVL-HDWCEAFPTY---PRTYDLV 613 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGl----ig~~-~~~~e~f~ty---prtyDl~ 613 (697)
..|||+|||.|+|+.++... .. .|+-+|.. ..+..+-+ -|+ +-++ .|..+..+.. ..+||+|
T Consensus 155 ~~VLDlgcGtG~~sl~la~~--ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAA--GA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHT--TC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CcEEEcccccCHHHHHHHHc--CC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 37999999999999999863 22 45555654 44443332 233 1122 2222211111 3589999
Q ss_pred cccCc-cccccCC---CCCCCcchhhhhhcccccCCcEEEEEc------C-HHHHHHHHHHHhhcCceeEE
Q 005417 614 HAEGL-LSLESGH---RHRCSTLDIFTEIDRILRPEGWVIIRD------T-ARLIESARALTTRLKWDARV 673 (697)
Q Consensus 614 H~~~~-~~~~~~~---~~~c~~~~~l~E~dRiLRP~G~~i~~d------~-~~~~~~~~~~~~~~~W~~~~ 673 (697)
-++-- |..-... ...-....++-++-|+|+|||++++.. + ....+.+++.+.....++..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~ 300 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVAS 300 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 87543 2211000 000123468888999999999977742 1 23344445566666666553
No 499
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.92 E-value=0.002 Score=84.95 Aligned_cols=102 Identities=12% Similarity=0.194 Sum_probs=49.4
Q ss_pred CCEEEEeCCCCchHHHHHhhc----CCceeEEEEecCCHHHHHHHHHcC--CCcEEEeecccCC-CCCCCCccEEEeccc
Q 005417 284 VRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQL-PYPSLSFDMLHCARC 356 (697)
Q Consensus 284 ~~~VLDIGCGtG~~a~~La~~----g~~~~sV~gvD~S~~ml~~A~erg--l~~~~~~~da~~L-Pfpd~sFDlV~~~~~ 356 (697)
..+|||||.|+|..+..+.+. .....+++-.|+|+...+.|+++. +.+.....+.... ++..++||+|++.++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 468999999999876554432 112356788899876665555441 1222222232222 345678999999988
Q ss_pred cccccccHHHHHHHHHHhccCCeEEEEEeC
Q 005417 357 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 386 (697)
Q Consensus 357 llh~~~d~~~~L~El~RvLKPGG~Lvis~p 386 (697)
+|-..+....|.+++++|||||++++...
T Consensus 1321 -l~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1321 -LATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ---------------------CCEEEEEEC
T ss_pred -ccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 67677788899999999999999998764
No 500
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.90 E-value=0.0032 Score=68.61 Aligned_cols=124 Identities=20% Similarity=0.228 Sum_probs=69.6
Q ss_pred eEEEecccCchhhhhhhhccCCCeEEEEeecCCCC-CchhhHhc----cCcccc--cccccccCCCCCCccccccccCc-
Q 005417 547 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVGV--LHDWCEAFPTYPRTYDLVHAEGL- 618 (697)
Q Consensus 547 RnvmDm~~g~g~Faaal~~~~~~vwvmnv~p~~~~-~~l~~i~~----RGlig~--~~~~~e~f~typrtyDl~H~~~~- 618 (697)
.+|||++||+|+|+.++...+.. |+-+|-. ..+..+-+ .|+-.. ..|..+..+.++..||+|.++--
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~-----V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~ 290 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAY-----ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT 290 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCE-----EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred CeEEEcccchhHHHHHHHHcCCe-----EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence 47999999999999999874332 3333433 33332222 233211 23333333333445999998643
Q ss_pred cccccCC--CCCCCcchhhhhhcccccCCcEEEEEcC------HHHHHHHHHHHhhcCceeEEee
Q 005417 619 LSLESGH--RHRCSTLDIFTEIDRILRPEGWVIIRDT------ARLIESARALTTRLKWDARVIE 675 (697)
Q Consensus 619 ~~~~~~~--~~~c~~~~~l~E~dRiLRP~G~~i~~d~------~~~~~~~~~~~~~~~W~~~~~~ 675 (697)
|..-... ........++-++=|+|+|||++++... ....+.+++.+.....++.+.+
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~ 355 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHR 355 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEE
Confidence 2211100 0001223678888999999999996532 2445566666666665655553
Done!