Query 005419
Match_columns 697
No_of_seqs 283 out of 1683
Neff 5.5
Searched_HMMs 29240
Date Tue Mar 26 00:50:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005419.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005419hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wg3_C Hedgehog-interacting pr 100.0 1.2E-66 4.2E-71 579.5 36.4 353 199-643 1-375 (463)
2 2g8s_A Glucose/sorbosone dehyd 100.0 3.7E-56 1.2E-60 476.4 39.3 341 197-639 3-352 (353)
3 1cru_A Protein (soluble quinop 100.0 4.9E-53 1.7E-57 468.4 38.8 356 197-636 12-431 (454)
4 3das_A Putative oxidoreductase 100.0 3E-53 1E-57 456.2 34.6 312 199-639 19-346 (347)
5 3a9g_A Putative uncharacterize 100.0 2.8E-51 9.5E-56 439.5 38.1 323 197-641 14-352 (354)
6 2ism_A Putative oxidoreductase 100.0 5.1E-47 1.8E-51 405.1 34.6 313 199-638 18-352 (352)
7 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 9.6E-05 3.3E-09 74.0 29.9 174 204-480 10-198 (314)
8 3fvz_A Peptidyl-glycine alpha- 98.5 1.9E-05 6.4E-10 81.7 24.2 27 612-638 291-319 (329)
9 3e5z_A Putative gluconolactona 98.5 9.5E-05 3.2E-09 74.3 28.4 176 199-480 15-193 (296)
10 2qc5_A Streptogramin B lactona 98.5 4.8E-05 1.6E-09 75.1 25.7 233 213-639 65-298 (300)
11 2qc5_A Streptogramin B lactona 98.4 0.00013 4.3E-09 72.1 27.1 233 213-639 23-258 (300)
12 3g4e_A Regucalcin; six bladed 98.4 0.00042 1.4E-08 70.4 29.6 155 213-480 16-171 (297)
13 4hw6_A Hypothetical protein, I 98.3 0.00027 9.3E-09 77.4 29.3 276 213-639 142-431 (433)
14 2z2n_A Virginiamycin B lyase; 98.3 0.00045 1.5E-08 68.0 27.9 233 213-639 18-253 (299)
15 2z2n_A Virginiamycin B lyase; 98.3 0.00068 2.3E-08 66.7 28.4 234 213-641 60-295 (299)
16 3dr2_A Exported gluconolactona 98.3 0.00064 2.2E-08 69.2 28.2 169 201-479 34-209 (305)
17 1rwi_B Serine/threonine-protei 98.2 0.0004 1.4E-08 68.0 25.2 231 213-638 27-261 (270)
18 3v64_C Agrin; beta propeller, 98.2 7.2E-05 2.5E-09 79.2 20.0 169 199-486 60-231 (349)
19 3v65_B Low-density lipoprotein 98.2 4.6E-05 1.6E-09 81.8 17.6 164 201-483 105-271 (386)
20 3tc9_A Hypothetical hydrolase; 98.1 0.001 3.4E-08 72.7 27.8 279 213-639 140-428 (430)
21 3p5b_L Low density lipoprotein 98.1 0.00013 4.5E-09 78.8 19.4 167 205-486 105-274 (400)
22 3sov_A LRP-6, low-density lipo 98.0 0.00017 5.8E-09 75.7 18.7 164 205-486 28-194 (318)
23 3m0c_C LDL receptor, low-densi 98.0 0.00015 5E-09 85.8 19.5 167 205-486 417-586 (791)
24 1ijq_A LDL receptor, low-densi 98.0 0.00039 1.3E-08 72.2 19.9 163 207-486 25-192 (316)
25 4a0p_A LRP6, LRP-6, low-densit 98.0 0.00023 7.9E-09 81.8 19.9 149 213-481 40-189 (628)
26 1npe_A Nidogen, entactin; glyc 97.9 0.0006 2.1E-08 67.9 19.4 151 213-481 39-190 (267)
27 3s94_A LRP-6, low-density lipo 97.8 0.00042 1.4E-08 79.5 18.8 159 207-483 35-196 (619)
28 3hrp_A Uncharacterized protein 97.8 0.00058 2E-08 73.8 18.4 60 213-290 222-285 (409)
29 3kya_A Putative phosphatase; s 97.8 0.019 6.5E-07 64.4 30.6 74 558-639 390-473 (496)
30 3hrp_A Uncharacterized protein 97.8 0.0012 4.3E-08 71.2 20.0 75 199-289 159-236 (409)
31 1rwi_B Serine/threonine-protei 97.7 0.00063 2.2E-08 66.6 15.4 146 213-482 111-257 (270)
32 1npe_A Nidogen, entactin; glyc 97.6 0.0056 1.9E-07 60.8 21.1 151 209-480 76-229 (267)
33 3v65_B Low-density lipoprotein 97.6 0.0021 7E-08 68.9 19.1 155 206-481 153-310 (386)
34 3s94_A LRP-6, low-density lipo 97.6 0.0016 5.5E-08 74.7 19.3 160 209-487 346-508 (619)
35 3v64_C Agrin; beta propeller, 97.6 0.0022 7.7E-08 67.7 19.0 155 207-482 111-268 (349)
36 2dg1_A DRP35, lactonase; beta 97.6 0.0071 2.4E-07 61.2 21.8 165 203-479 36-203 (333)
37 3m0c_C LDL receptor, low-densi 97.6 0.0028 9.6E-08 74.9 21.1 157 209-486 468-629 (791)
38 4a0p_A LRP6, LRP-6, low-densit 97.5 0.0042 1.4E-07 71.3 21.1 156 207-485 75-233 (628)
39 3sov_A LRP-6, low-density lipo 97.5 0.0061 2.1E-07 63.8 20.5 154 206-481 73-230 (318)
40 3g4e_A Regucalcin; six bladed 97.4 0.004 1.4E-07 63.1 17.4 62 372-481 202-265 (297)
41 1ijq_A LDL receptor, low-densi 97.4 0.01 3.5E-07 61.4 20.4 150 209-480 74-229 (316)
42 3p5b_L Low density lipoprotein 97.4 0.011 3.9E-07 63.6 21.3 159 206-486 153-317 (400)
43 4hw6_A Hypothetical protein, I 97.4 0.0046 1.6E-07 67.6 17.8 30 456-486 401-430 (433)
44 1n7d_A LDL receptor, low-densi 97.3 0.00044 1.5E-08 80.4 9.7 165 204-483 398-565 (699)
45 3sre_A PON1, serum paraoxonase 97.3 0.01 3.4E-07 63.9 19.4 77 370-481 166-244 (355)
46 1q7f_A NHL, brain tumor CG1071 97.3 0.028 9.6E-07 55.6 21.3 70 200-291 108-182 (286)
47 3tc9_A Hypothetical hydrolase; 97.3 0.0059 2E-07 66.5 17.5 29 456-485 398-426 (430)
48 2fp8_A Strictosidine synthase; 97.2 0.01 3.4E-07 60.8 17.1 158 213-481 129-305 (322)
49 1q7f_A NHL, brain tumor CG1071 97.1 0.02 6.9E-07 56.6 18.3 56 213-290 80-138 (286)
50 2fp8_A Strictosidine synthase; 97.0 0.012 4E-07 60.3 15.6 80 371-480 128-207 (322)
51 3fvz_A Peptidyl-glycine alpha- 97.0 0.044 1.5E-06 56.3 19.8 167 213-487 146-320 (329)
52 1pjx_A Dfpase, DIISOPROPYLFLUO 97.0 0.025 8.6E-07 56.2 17.2 68 371-489 228-296 (314)
53 3a9g_A Putative uncharacterize 96.9 0.017 5.9E-07 61.3 16.3 66 213-292 138-217 (354)
54 2p4o_A Hypothetical protein; p 96.9 0.023 8E-07 57.9 16.5 60 372-479 215-279 (306)
55 3das_A Putative oxidoreductase 96.9 0.0091 3.1E-07 64.0 13.5 64 213-291 143-220 (347)
56 3dsm_A Uncharacterized protein 96.8 0.062 2.1E-06 55.3 18.9 60 370-476 226-285 (328)
57 3e5z_A Putative gluconolactona 96.8 0.05 1.7E-06 54.3 17.6 55 373-477 222-276 (296)
58 3hfq_A Uncharacterized protein 96.7 0.092 3.1E-06 53.3 19.1 59 213-289 144-204 (347)
59 2ghs_A AGR_C_1268P; regucalcin 96.6 0.15 5E-06 52.5 20.3 62 372-481 233-295 (326)
60 3vgz_A Uncharacterized protein 96.6 0.15 5E-06 51.1 19.6 62 213-290 188-249 (353)
61 3kya_A Putative phosphatase; s 96.6 0.061 2.1E-06 60.4 17.9 29 455-484 442-470 (496)
62 3dsm_A Uncharacterized protein 96.5 0.16 5.6E-06 52.2 20.0 163 201-477 74-244 (328)
63 2ghs_A AGR_C_1268P; regucalcin 96.5 0.12 3.9E-06 53.3 18.5 64 372-479 137-200 (326)
64 3dr2_A Exported gluconolactona 96.5 0.068 2.3E-06 54.1 16.1 25 373-417 243-267 (305)
65 2dg1_A DRP35, lactonase; beta 96.4 0.18 6.2E-06 50.7 18.9 24 213-238 138-168 (333)
66 3vgz_A Uncharacterized protein 96.4 0.17 5.7E-06 50.7 18.5 26 213-239 144-171 (353)
67 2p4o_A Hypothetical protein; p 96.3 0.03 1E-06 57.1 12.7 121 218-417 175-300 (306)
68 1n7d_A LDL receptor, low-densi 96.3 0.012 4.2E-07 68.2 10.8 62 370-480 541-605 (699)
69 1ri6_A Putative isomerase YBHE 96.3 0.3 1E-05 48.3 19.4 63 213-289 132-195 (343)
70 3hfq_A Uncharacterized protein 96.2 0.25 8.7E-06 50.0 18.7 30 213-243 89-119 (347)
71 2qe8_A Uncharacterized protein 96.1 0.052 1.8E-06 56.2 13.0 135 213-417 198-337 (343)
72 3u4y_A Uncharacterized protein 96.0 0.33 1.1E-05 48.4 18.4 74 201-290 118-194 (331)
73 1jof_A Carboxy-CIS,CIS-muconat 96.0 0.38 1.3E-05 49.8 19.2 61 213-289 148-210 (365)
74 2qe8_A Uncharacterized protein 95.9 0.56 1.9E-05 48.4 20.0 71 203-291 8-85 (343)
75 3scy_A Hypothetical bacterial 95.9 0.93 3.2E-05 46.1 21.3 65 213-289 158-228 (361)
76 1tl2_A L10, protein (tachylect 95.8 0.036 1.2E-06 56.4 9.9 71 203-289 31-104 (236)
77 2p9w_A MAL S 1 allergenic prot 95.7 0.14 4.7E-06 54.8 14.6 67 371-486 139-212 (334)
78 2ism_A Putative oxidoreductase 95.5 0.2 6.9E-06 52.7 15.0 28 202-231 192-222 (352)
79 3u4y_A Uncharacterized protein 95.0 1.2 4.1E-05 44.2 18.3 67 204-291 76-147 (331)
80 1nir_A Nitrite reductase; hemo 94.5 4.8 0.00016 44.7 23.3 75 200-290 168-244 (543)
81 1l0q_A Surface layer protein; 94.5 4.3 0.00015 41.2 21.2 66 203-289 24-91 (391)
82 3qqz_A Putative uncharacterize 94.3 5.3 0.00018 40.7 21.7 160 213-479 30-194 (255)
83 2g8s_A Glucose/sorbosone dehyd 94.2 0.74 2.5E-05 48.5 15.1 38 447-490 8-46 (353)
84 2iwa_A Glutamine cyclotransfer 94.0 1.7 5.7E-05 44.7 16.9 33 458-491 207-239 (266)
85 1l0q_A Surface layer protein; 93.6 6.9 0.00023 39.7 21.3 68 201-289 64-133 (391)
86 1cru_A Protein (soluble quinop 93.2 1.8 6E-05 47.6 16.3 40 446-490 16-55 (454)
87 3bws_A Protein LP49; two-domai 92.5 11 0.00037 38.8 22.5 67 203-290 246-321 (433)
88 3scy_A Hypothetical bacterial 92.5 2.3 7.9E-05 43.1 15.1 63 213-290 214-277 (361)
89 1ri6_A Putative isomerase YBHE 92.4 8.9 0.0003 37.6 22.0 59 213-289 87-146 (343)
90 3qqz_A Putative uncharacterize 90.8 1 3.6E-05 45.9 10.2 64 213-290 124-191 (255)
91 1nir_A Nitrite reductase; hemo 90.8 9.1 0.00031 42.5 18.7 60 213-291 283-343 (543)
92 2p9w_A MAL S 1 allergenic prot 89.1 3.6 0.00012 43.9 13.0 20 269-292 137-156 (334)
93 1fwx_A Nitrous oxide reductase 89.1 1 3.6E-05 51.5 9.4 75 204-290 270-348 (595)
94 2hqs_A Protein TOLB; TOLB, PAL 88.8 18 0.00063 38.0 18.5 26 213-239 182-210 (415)
95 3nol_A Glutamine cyclotransfer 88.2 13 0.00044 38.2 16.0 31 458-489 226-256 (262)
96 1jof_A Carboxy-CIS,CIS-muconat 87.4 4.7 0.00016 41.4 12.5 22 458-480 255-277 (365)
97 4g56_B MGC81050 protein; prote 87.1 18 0.0006 37.1 16.6 60 213-289 185-244 (357)
98 3nok_A Glutaminyl cyclase; bet 87.1 13 0.00043 38.5 15.2 22 458-480 236-257 (268)
99 2iwa_A Glutamine cyclotransfer 87.0 27 0.00091 35.7 17.7 25 213-239 24-51 (266)
100 3c75_H MADH, methylamine dehyd 87.0 25 0.00086 38.3 18.4 69 203-290 111-195 (426)
101 4ery_A WD repeat-containing pr 86.9 18 0.00061 35.5 16.0 62 201-279 12-76 (312)
102 4g56_B MGC81050 protein; prote 85.9 3.2 0.00011 42.8 10.1 58 213-288 46-110 (357)
103 3bws_A Protein LP49; two-domai 85.5 35 0.0012 34.9 22.1 57 213-290 215-272 (433)
104 3k26_A Polycomb protein EED; W 85.5 12 0.00043 36.8 14.0 76 205-291 11-92 (366)
105 3no2_A Uncharacterized protein 85.1 33 0.0011 34.2 26.6 31 612-642 212-254 (276)
106 1jmx_B Amine dehydrogenase; ox 84.9 9.2 0.00031 37.7 12.7 26 213-239 46-72 (349)
107 3ow8_A WD repeat-containing pr 84.6 9.7 0.00033 38.5 13.0 58 213-291 210-267 (321)
108 3sre_A PON1, serum paraoxonase 84.6 18 0.00063 38.4 15.5 69 203-289 212-283 (355)
109 3ow8_A WD repeat-containing pr 84.2 16 0.00055 36.8 14.4 69 201-290 112-182 (321)
110 2ymu_A WD-40 repeat protein; u 83.5 14 0.00048 39.6 14.3 56 213-290 20-75 (577)
111 1got_B GT-beta; complex (GTP-b 83.4 17 0.00058 36.7 14.2 58 213-291 188-245 (340)
112 3sjl_D Methylamine dehydrogena 83.4 3.6 0.00012 44.5 9.5 57 213-291 36-97 (386)
113 3fm0_A Protein CIAO1; WDR39,SG 83.3 13 0.00044 37.7 13.3 61 213-291 109-169 (345)
114 3mbr_X Glutamine cyclotransfer 83.0 39 0.0013 34.1 16.4 30 458-488 205-234 (243)
115 3iz6_a 40S ribosomal protein R 81.7 13 0.00043 38.4 12.6 26 213-239 253-278 (380)
116 1pby_B Quinohemoprotein amine 81.4 39 0.0013 32.7 15.5 26 614-639 281-307 (337)
117 1jmx_B Amine dehydrogenase; ox 81.3 10 0.00035 37.3 11.4 57 214-290 4-61 (349)
118 1pby_B Quinohemoprotein amine 80.5 35 0.0012 33.1 14.8 26 213-239 37-63 (337)
119 2ymu_A WD-40 repeat protein; u 80.4 20 0.00069 38.3 14.1 55 213-289 471-525 (577)
120 2ynn_A Coatomer subunit beta'; 80.3 21 0.00071 35.3 13.3 26 213-239 17-42 (304)
121 3f3f_A Nucleoporin SEH1; struc 79.9 27 0.00094 33.5 13.7 63 213-290 15-77 (351)
122 3frx_A Guanine nucleotide-bind 79.9 32 0.0011 34.2 14.7 49 213-279 200-248 (319)
123 4h5i_A Guanine nucleotide-exch 79.6 41 0.0014 34.5 15.7 73 201-293 167-240 (365)
124 3azo_A Aminopeptidase; POP fam 79.1 34 0.0012 37.7 15.7 26 213-239 191-224 (662)
125 1sq9_A Antiviral protein SKI8; 79.0 43 0.0015 33.6 15.4 26 213-239 237-265 (397)
126 4gqb_B Methylosome protein 50; 79.0 20 0.00068 36.8 13.0 61 213-291 86-146 (344)
127 2aq5_A Coronin-1A; WD40 repeat 78.2 23 0.0008 36.2 13.3 51 213-278 135-186 (402)
128 3no2_A Uncharacterized protein 78.0 58 0.002 32.4 17.2 23 213-238 40-62 (276)
129 2hqs_A Protein TOLB; TOLB, PAL 77.3 75 0.0025 33.3 17.9 26 213-239 226-254 (415)
130 2ojh_A Uncharacterized protein 77.2 48 0.0016 31.0 17.2 25 213-239 45-69 (297)
131 3fm0_A Protein CIAO1; WDR39,SG 77.0 39 0.0013 34.1 14.4 60 213-291 65-124 (345)
132 2ece_A 462AA long hypothetical 77.0 11 0.00037 41.9 10.6 39 373-417 385-425 (462)
133 2xyi_A Probable histone-bindin 76.7 38 0.0013 35.4 14.6 63 213-291 235-297 (430)
134 1k8k_C P40, ARP2/3 complex 41 76.7 33 0.0011 33.9 13.5 58 213-289 12-69 (372)
135 1xfd_A DIP, dipeptidyl aminope 76.6 21 0.00073 39.7 13.2 25 213-239 20-44 (723)
136 2aq5_A Coronin-1A; WD40 repeat 76.5 43 0.0015 34.2 14.7 57 213-279 85-142 (402)
137 3vl1_A 26S proteasome regulato 76.1 47 0.0016 33.6 14.8 27 213-239 294-320 (420)
138 1gxr_A ESG1, transducin-like e 75.5 60 0.002 31.3 15.5 54 213-279 55-108 (337)
139 2hes_X YDR267CP; beta-propelle 75.5 34 0.0012 34.3 13.4 65 213-291 62-126 (330)
140 3o4h_A Acylamino-acid-releasin 75.4 12 0.0004 41.0 10.5 26 213-239 153-182 (582)
141 4gqb_B Methylosome protein 50; 75.4 22 0.00076 36.5 12.2 59 213-291 131-189 (344)
142 3vu4_A KMHSV2; beta-propeller 75.4 29 0.00099 35.4 13.0 59 213-291 199-259 (355)
143 4e54_B DNA damage-binding prot 75.2 25 0.00086 36.7 12.7 61 213-290 123-183 (435)
144 2z3z_A Dipeptidyl aminopeptida 75.2 57 0.002 36.2 16.3 16 213-229 184-199 (706)
145 2wg3_C Hedgehog-interacting pr 75.0 8.5 0.00029 42.4 9.3 73 213-289 142-238 (463)
146 4a9v_A PHOX; hydrolase, beta-p 74.7 1.1E+02 0.0037 35.0 18.3 72 373-480 480-553 (592)
147 2ojh_A Uncharacterized protein 74.4 57 0.0019 30.5 17.7 40 370-417 218-258 (297)
148 2pm9_A Protein WEB1, protein t 74.1 29 0.00098 35.1 12.5 27 213-239 117-143 (416)
149 1erj_A Transcriptional repress 73.9 32 0.0011 35.4 13.0 58 213-291 169-226 (393)
150 3odt_A Protein DOA1; ubiquitin 73.7 39 0.0013 32.3 12.8 49 213-279 188-236 (313)
151 1xfd_A DIP, dipeptidyl aminope 73.6 1.1E+02 0.0039 33.7 19.0 16 213-229 176-191 (723)
152 1qks_A Cytochrome CD1 nitrite 73.5 1.2E+02 0.0041 33.9 22.6 75 201-291 187-263 (567)
153 2mad_H Methylamine dehydrogena 73.2 93 0.0032 32.5 18.7 25 213-238 128-154 (373)
154 3zwl_B Eukaryotic translation 72.9 72 0.0025 31.1 17.2 49 213-278 36-84 (369)
155 3mmy_A MRNA export factor; mRN 72.7 67 0.0023 31.3 14.4 59 213-289 43-103 (368)
156 2pm9_A Protein WEB1, protein t 72.7 30 0.001 34.9 12.2 61 213-291 218-282 (416)
157 3jrp_A Fusion protein of prote 72.3 77 0.0026 31.1 15.6 52 213-279 105-158 (379)
158 1got_B GT-beta; complex (GTP-b 72.3 42 0.0015 33.6 13.2 50 213-279 59-108 (340)
159 1nr0_A Actin interacting prote 72.2 29 0.00098 38.4 12.8 59 213-291 151-209 (611)
160 1gxr_A ESG1, transducin-like e 72.0 72 0.0025 30.7 15.9 55 213-289 228-282 (337)
161 2ecf_A Dipeptidyl peptidase IV 71.9 25 0.00084 39.4 12.3 19 213-232 212-230 (741)
162 3gre_A Serine/threonine-protei 71.9 33 0.0011 35.3 12.5 63 213-291 218-280 (437)
163 3dw8_B Serine/threonine-protei 70.7 18 0.00061 37.1 10.1 65 213-291 181-246 (447)
164 3azo_A Aminopeptidase; POP fam 70.6 40 0.0014 37.1 13.5 26 213-239 133-168 (662)
165 3lrv_A PRE-mRNA-splicing facto 70.0 27 0.00091 35.1 11.0 58 213-290 129-188 (343)
166 3q6k_A 43.2 kDa salivary prote 69.9 91 0.0031 33.5 15.6 135 213-416 223-369 (381)
167 3dwl_C Actin-related protein 2 69.8 35 0.0012 34.2 11.8 54 213-279 104-157 (377)
168 3f3f_A Nucleoporin SEH1; struc 69.7 79 0.0027 30.2 15.6 72 213-288 114-187 (351)
169 3zwl_B Eukaryotic translation 69.1 88 0.003 30.5 19.1 51 213-279 179-229 (369)
170 3pe7_A Oligogalacturonate lyas 69.0 97 0.0033 30.9 15.1 25 215-239 41-67 (388)
171 3ei3_B DNA damage-binding prot 68.7 84 0.0029 31.5 14.5 61 213-290 77-137 (383)
172 2cn3_A Xyloglucanase, beta-1,4 68.5 74 0.0025 36.7 15.6 37 372-417 247-283 (737)
173 1sq9_A Antiviral protein SKI8; 68.3 57 0.0019 32.7 13.1 25 213-239 190-214 (397)
174 3mkq_A Coatomer beta'-subunit; 68.1 42 0.0014 37.7 13.1 50 213-279 17-66 (814)
175 2hes_X YDR267CP; beta-propelle 67.8 93 0.0032 31.0 14.5 62 213-291 111-172 (330)
176 3dm0_A Maltose-binding peripla 66.9 87 0.003 34.9 15.4 76 201-291 371-449 (694)
177 4a9v_A PHOX; hydrolase, beta-p 66.7 12 0.00042 42.7 8.2 99 373-478 388-496 (592)
178 3jrp_A Fusion protein of prote 66.4 75 0.0026 31.2 13.3 64 213-290 151-227 (379)
179 3k26_A Polycomb protein EED; W 66.3 68 0.0023 31.3 12.9 60 213-291 73-135 (366)
180 1k8k_C P40, ARP2/3 complex 41 66.2 1E+02 0.0035 30.2 14.7 26 213-239 146-171 (372)
181 1r5m_A SIR4-interacting protei 66.1 41 0.0014 33.7 11.5 49 213-279 293-341 (425)
182 3vl1_A 26S proteasome regulato 66.0 70 0.0024 32.3 13.3 50 213-279 143-192 (420)
183 1erj_A Transcriptional repress 65.5 93 0.0032 31.9 14.3 50 213-279 127-176 (393)
184 3i2n_A WD repeat-containing pr 65.4 36 0.0012 33.3 10.7 55 213-279 213-270 (357)
185 2vdu_B TRNA (guanine-N(7)-)-me 64.6 84 0.0029 32.8 14.0 63 213-289 153-215 (450)
186 3dw8_B Serine/threonine-protei 64.6 1.3E+02 0.0043 30.6 19.1 27 213-239 230-256 (447)
187 2pbi_B Guanine nucleotide-bind 64.5 94 0.0032 31.4 14.0 56 213-289 68-123 (354)
188 3amr_A 3-phytase; beta-propell 63.9 1.6E+02 0.0054 31.5 17.4 25 458-482 230-256 (355)
189 2xzm_R RACK1; ribosome, transl 63.8 72 0.0025 31.9 12.8 26 213-239 217-242 (343)
190 2xyi_A Probable histone-bindin 63.7 65 0.0022 33.5 12.9 66 213-290 185-250 (430)
191 1r5m_A SIR4-interacting protei 63.5 88 0.003 31.2 13.3 49 213-278 251-299 (425)
192 2j04_A TAU60, YPL007P, hypothe 63.0 74 0.0025 36.3 13.8 25 213-238 89-113 (588)
193 1pgu_A Actin interacting prote 61.5 52 0.0018 35.1 11.8 50 213-278 492-541 (615)
194 4h5i_A Guanine nucleotide-exch 61.4 18 0.00062 37.2 7.9 61 213-293 273-333 (365)
195 2pm7_B Protein transport prote 61.2 91 0.0031 30.5 12.8 62 213-291 13-74 (297)
196 2z3z_A Dipeptidyl aminopeptida 60.7 2E+02 0.0069 31.7 19.8 26 213-239 261-291 (706)
197 1nr0_A Actin interacting prote 60.5 48 0.0016 36.6 11.6 60 210-291 19-78 (611)
198 3ei3_B DNA damage-binding prot 60.5 1.4E+02 0.0048 29.8 14.5 38 201-239 241-280 (383)
199 3nol_A Glutamine cyclotransfer 59.5 15 0.0005 37.8 6.6 63 215-289 177-242 (262)
200 1vyh_C Platelet-activating fac 59.1 75 0.0026 33.0 12.3 58 213-291 112-169 (410)
201 3dwl_C Actin-related protein 2 59.1 94 0.0032 30.9 12.6 26 213-239 150-175 (377)
202 3sjl_D Methylamine dehydrogena 59.0 47 0.0016 35.7 10.8 20 270-292 281-300 (386)
203 4aez_A CDC20, WD repeat-contai 58.4 1.6E+02 0.0056 29.9 15.8 49 213-279 263-314 (401)
204 4ery_A WD repeat-containing pr 57.8 1.4E+02 0.0048 28.9 15.5 50 213-279 69-118 (312)
205 2pm7_B Protein transport prote 57.5 1.4E+02 0.0049 29.0 14.9 53 213-280 103-157 (297)
206 3frx_A Guanine nucleotide-bind 57.3 1.5E+02 0.0052 29.2 14.3 64 213-291 21-84 (319)
207 3lrv_A PRE-mRNA-splicing facto 57.0 55 0.0019 32.7 10.5 59 213-291 174-233 (343)
208 1vyh_C Platelet-activating fac 56.9 96 0.0033 32.1 12.6 58 213-291 154-211 (410)
209 1k32_A Tricorn protease; prote 56.7 90 0.0031 37.0 13.8 26 213-239 382-407 (1045)
210 1qks_A Cytochrome CD1 nitrite 56.6 1.7E+02 0.0058 32.7 15.3 35 203-238 232-272 (567)
211 2ecf_A Dipeptidyl peptidase IV 56.5 52 0.0018 36.7 11.1 25 213-239 112-136 (741)
212 3zwu_A Alkaline phosphatase PH 55.3 2.4E+02 0.0081 32.1 16.3 21 271-294 386-406 (592)
213 4aez_A CDC20, WD repeat-contai 55.2 1.6E+02 0.0054 30.0 13.8 57 213-289 221-277 (401)
214 4aow_A Guanine nucleotide-bind 54.1 1.6E+02 0.0054 28.4 13.9 26 213-239 219-244 (340)
215 3jro_A Fusion protein of prote 53.9 66 0.0023 36.7 11.6 62 213-291 13-74 (753)
216 3i2n_A WD repeat-containing pr 53.9 97 0.0033 30.1 11.5 64 216-291 124-187 (357)
217 1yfq_A Cell cycle arrest prote 53.3 74 0.0025 31.0 10.5 53 213-279 15-67 (342)
218 3gre_A Serine/threonine-protei 53.2 81 0.0028 32.3 11.2 26 213-239 115-140 (437)
219 3mkq_A Coatomer beta'-subunit; 53.1 1.5E+02 0.0052 33.0 14.3 50 213-279 59-108 (814)
220 1tl2_A L10, protein (tachylect 52.2 14 0.00047 37.5 4.9 30 612-641 40-69 (236)
221 3sfz_A APAF-1, apoptotic pepti 52.1 1.1E+02 0.0036 36.6 13.4 58 213-291 619-676 (1249)
222 3c75_H MADH, methylamine dehyd 49.9 89 0.0031 33.9 11.3 18 370-388 371-390 (426)
223 4a11_B DNA excision repair pro 49.2 1.3E+02 0.0044 29.8 11.7 27 213-240 47-74 (408)
224 2pbi_B Guanine nucleotide-bind 48.3 2.3E+02 0.0077 28.5 16.2 59 213-291 200-259 (354)
225 2xbg_A YCF48-like protein; pho 47.8 2.3E+02 0.008 28.5 13.9 57 213-290 166-222 (327)
226 3sfz_A APAF-1, apoptotic pepti 47.5 2.4E+02 0.0081 33.6 15.5 59 213-290 661-719 (1249)
227 3mmy_A MRNA export factor; mRN 46.4 46 0.0016 32.5 7.7 59 213-292 277-335 (368)
228 1mda_H Methylamine dehydrogena 45.7 40 0.0014 35.8 7.5 71 201-290 56-142 (368)
229 3v9f_A Two-component system se 45.5 1E+02 0.0035 35.1 11.5 54 363-417 622-675 (781)
230 3zwu_A Alkaline phosphatase PH 45.3 52 0.0018 37.5 8.8 101 373-479 388-496 (592)
231 3nok_A Glutaminyl cyclase; bet 43.8 23 0.00079 36.5 5.1 60 215-289 186-252 (268)
232 4a11_B DNA excision repair pro 43.6 2.5E+02 0.0085 27.6 12.9 59 213-288 103-161 (408)
233 2oiz_A Aromatic amine dehydrog 43.2 29 0.001 35.8 5.9 61 203-279 298-358 (361)
234 3jro_A Fusion protein of prote 42.9 2.7E+02 0.0091 31.6 14.4 52 213-279 103-156 (753)
235 2oiz_A Aromatic amine dehydrog 42.9 85 0.0029 32.2 9.4 73 204-290 44-126 (361)
236 2xzm_R RACK1; ribosome, transl 42.6 2.6E+02 0.009 27.6 15.5 64 213-290 25-94 (343)
237 3hxj_A Pyrrolo-quinoline quino 42.6 2.2E+02 0.0076 27.5 12.1 21 370-391 296-316 (330)
238 2vdu_B TRNA (guanine-N(7)-)-me 40.7 2.2E+02 0.0076 29.5 12.4 27 213-240 199-228 (450)
239 3q6k_A 43.2 kDa salivary prote 40.4 1.4E+02 0.0047 32.1 10.7 21 269-289 220-241 (381)
240 2ynn_A Coatomer subunit beta'; 40.0 2.7E+02 0.0093 27.0 16.3 27 213-239 144-170 (304)
241 2gop_A Trilobed protease; beta 39.8 2.8E+02 0.0094 27.1 12.5 26 213-239 62-92 (347)
242 3dm0_A Maltose-binding peripla 39.6 3.9E+02 0.013 29.6 14.8 50 213-279 434-483 (694)
243 1pgu_A Actin interacting prote 39.5 3.2E+02 0.011 28.9 13.5 27 213-239 164-190 (615)
244 3bg1_A Protein SEC13 homolog; 38.7 1.3E+02 0.0044 29.7 9.7 24 268-291 212-235 (316)
245 3o4h_A Acylamino-acid-releasin 37.9 46 0.0016 36.1 6.7 26 213-239 198-225 (582)
246 1yr2_A Prolyl oligopeptidase; 37.6 1.3E+02 0.0044 34.1 10.6 26 213-239 166-196 (741)
247 3iz6_a 40S ribosomal protein R 37.3 3.4E+02 0.012 27.4 14.1 59 213-291 209-268 (380)
248 4aow_A Guanine nucleotide-bind 37.0 2.9E+02 0.0098 26.5 15.5 76 201-291 27-105 (340)
249 2ece_A 462AA long hypothetical 36.8 71 0.0024 35.4 7.9 62 213-290 324-399 (462)
250 2xdw_A Prolyl endopeptidase; a 35.4 2.3E+02 0.0079 31.7 12.2 26 213-239 128-158 (710)
251 2oaj_A Protein SNI1; WD40 repe 35.0 3E+02 0.01 32.2 13.5 26 213-239 21-46 (902)
252 2oaj_A Protein SNI1; WD40 repe 33.2 2.7E+02 0.0094 32.6 12.7 26 213-239 492-517 (902)
253 1mda_H Methylamine dehydrogena 31.2 68 0.0023 34.0 6.4 59 203-279 306-367 (368)
254 3odt_A Protein DOA1; ubiquitin 30.3 1.5E+02 0.0052 28.1 8.3 60 201-278 7-69 (313)
255 3qnt_A Niemann-PICK C1-like pr 29.8 16 0.00054 37.7 1.1 109 26-138 37-159 (265)
256 3mbr_X Glutamine cyclotransfer 29.0 1.2E+02 0.004 30.6 7.4 60 215-289 155-221 (243)
257 1z68_A Fibroblast activation p 28.1 1.4E+02 0.0047 33.2 8.6 26 213-239 63-97 (719)
258 4gga_A P55CDC, cell division c 28.1 2.1E+02 0.0071 29.3 9.5 70 201-291 311-383 (420)
259 2bkl_A Prolyl endopeptidase; m 27.2 3.5E+02 0.012 30.2 11.8 27 213-239 124-154 (695)
260 4a5s_A Dipeptidyl peptidase 4 25.2 68 0.0023 36.4 5.5 24 213-239 20-43 (740)
261 2oit_A Nucleoporin 214KDA; NH2 23.6 4.3E+02 0.015 27.7 11.1 66 213-293 196-261 (434)
262 2oit_A Nucleoporin 214KDA; NH2 23.3 3.5E+02 0.012 28.4 10.4 51 213-279 153-203 (434)
263 3v7d_B Cell division control p 23.1 6.1E+02 0.021 25.8 12.6 26 213-239 314-339 (464)
264 3bg1_A Protein SEC13 homolog; 22.8 2.8E+02 0.0096 27.2 9.0 62 213-290 216-280 (316)
265 1yfq_A Cell cycle arrest prote 22.3 5.2E+02 0.018 24.7 13.6 24 213-239 154-177 (342)
266 3amr_A 3-phytase; beta-propell 22.1 2.3E+02 0.008 30.1 8.5 26 213-239 183-208 (355)
267 1z68_A Fibroblast activation p 22.0 1.9E+02 0.0065 32.0 8.3 25 213-239 19-43 (719)
268 2b4w_A Hypothetical protein, c 21.3 6E+02 0.021 26.5 10.9 22 369-391 264-287 (315)
269 4e54_B DNA damage-binding prot 20.7 1.9E+02 0.0065 29.9 7.5 62 213-291 254-315 (435)
No 1
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=100.00 E-value=1.2e-66 Score=579.49 Aligned_cols=353 Identities=28% Similarity=0.541 Sum_probs=271.1
Q ss_pred CCCcEEEEEecCce--eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceee----ccCCcee
Q 005419 199 PSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHA----DVELGMM 272 (697)
Q Consensus 199 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~----~~e~GLL 272 (697)
+.||++|+||+||. |.|+++|||++||||+||.|+||+++ + ++. . .+++++|+...+.. .+|+|||
T Consensus 1 ~~gf~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~-~-~g~--~----~~~~~~~~~~~~~~g~~~~~e~Gll 72 (463)
T 2wg3_C 1 HNCFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-P-EGE--I----FKEPYLDIHKLVQSGIKGGDERGLL 72 (463)
T ss_dssp -CCEEEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEEC-T-TSC--B----CSSCSEECTTTBCCCCSSSCCCSEE
T ss_pred CCceEEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEe-C-CCC--e----eeeeecCCcceeccCccccCCCcce
Confidence 35899999999999 99999999988999999999999985 2 232 1 24578888654432 3599999
Q ss_pred eeEeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccC
Q 005419 273 GIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVK 352 (697)
Q Consensus 273 GiAfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~ 352 (697)
||||||+|++|++|||+|+.....+. + .+....++|+||+++.. ....++
T Consensus 73 gia~~P~f~~n~~lYv~yt~~~~~~~----------------------~--~~~~~~~~v~r~~~~~~------~~~~~d 122 (463)
T 2wg3_C 73 SLAFHPNYKKNGKLYVSYTTNQERWA----------------------I--GPHDHILRVVEYTVSRK------NPHQVD 122 (463)
T ss_dssp EEEECTTHHHHCEEEEEEEECCCSSC----------------------S--SSSCEEEEEEEEEBCTT------CTTSBC
T ss_pred eeEeCCCCcCCCEEEEEEeCCCCCcc----------------------c--CCcccceEEEEEEEcCC------CCCccC
Confidence 99999999999999999997543211 0 01223579999998643 012345
Q ss_pred CCceEEEEeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCC
Q 005419 353 PLEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGN 432 (697)
Q Consensus 353 ~~~~r~Il~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~ 432 (697)
+.++++|+++..+...|+|++|+|+| ||+|||++||+++..++..++|++.+++|||||||+|+. +.+++
T Consensus 123 ~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~---------~~~~~ 192 (463)
T 2wg3_C 123 LRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD---------MCNVP 192 (463)
T ss_dssp GGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC---------CSSCS
T ss_pred CCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC---------ccccc
Confidence 66778888865567789999999999 999999999998776666679999999999999999984 23469
Q ss_pred ccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCC-----eEEEEEc-CCC-CceeeEEeccCCCCCcccccCCCCC
Q 005419 433 YSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPS-----YFLCADV-GQD-EYEEVDIVTKGGNYGWRVYEGPFRY 505 (697)
Q Consensus 433 YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~-----~L~~~Dv-G~d-~~EEIn~I~kG~NYGWP~~eG~~~~ 505 (697)
|+||+||||++.+++++||||+||||||||+|||.+++ .+|++|+ |++ ..|||++|++|+||||+
T Consensus 193 y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~-------- 264 (463)
T 2wg3_C 193 YSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESE-------- 264 (463)
T ss_dssp CBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSC--------
T ss_pred CcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCC--------
Confidence 99999999999999999999999999999999999762 5788999 665 47999999999999993
Q ss_pred CCCCCCCCCCCCCCCCCccceeeecCCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCee
Q 005419 506 NPPSSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFS 585 (697)
Q Consensus 506 ~p~~~p~g~~~~~~~~~~~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~ 585 (697)
+|++.|+|+ .+ .||+|++||+|++||+|+|.||++|+. ++||++.+++.. +.|+
T Consensus 265 ------------------~P~~~~~~~-----~g-~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~-~~~~ 318 (463)
T 2wg3_C 265 ------------------PSLLEFKPF-----SN-GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVT-KQWQ 318 (463)
T ss_dssp ------------------CCCEECCC----------CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC------CCE
T ss_pred ------------------CCeEEeeCC-----CC-ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCC-ceee
Confidence 489999874 23 799999999999999999999999995 899999876542 3455
Q ss_pred EEEEeeccCCCCCcccccccccccCCCCceeeEEEcCCCcEEEEec---------CeEEEEecCCCC
Q 005419 586 TTKLSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLAS---------NGVYRVVRPSRC 643 (697)
Q Consensus 586 ~~~i~f~~~~~~p~~c~~~~g~~~~~~grI~sf~ed~dGeLYvlts---------~gIYRIv~ps~c 643 (697)
.+.+. .+.. +.+. ...++||++|+++|||+|||+++ ++||||++|+++
T Consensus 319 ~~~~~---~g~~-~~~~------~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~ 375 (463)
T 2wg3_C 319 EKPLC---LGTS-GSCR------GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRP 375 (463)
T ss_dssp EEEEC---EEET-TSSC------SCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSC
T ss_pred EEEee---cCCc-cccc------ccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccc
Confidence 44331 1110 1111 12468999999999999999996 249999998875
No 2
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=100.00 E-value=3.7e-56 Score=476.44 Aligned_cols=341 Identities=21% Similarity=0.350 Sum_probs=269.1
Q ss_pred CCCCCcEEEEEecCce--eeEEECCCCCce-EEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceee
Q 005419 197 SPPSGLCLEKVGTGAY--LNMVPHPDGSNR-VFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMG 273 (697)
Q Consensus 197 ~~p~G~~le~va~Gl~--~~m~~~pDGs~R-lfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLG 273 (697)
+.|+||++|+|+++|. +.|++.||| | |||+|+.|+|++++ + ++. . .+++.++. .|...+++|++|
T Consensus 3 ~~p~g~~~~~va~~l~~P~~i~~~pdG--~~l~V~e~~G~i~~~~-~-~g~--~-----~~~~~~~~-~v~~~g~~g~~g 70 (353)
T 2g8s_A 3 MAPATVNVEVLQDKLDHPWALAFLPDN--HGMLITLRGGELRHWQ-A-GKG--L-----SAPLSGVP-DVWAHGQGGLLD 70 (353)
T ss_dssp ---CCSEEEEEEEEESSEEEEEECSTT--CCEEEEETTTEEEEEE-T-TTE--E-----CCCCBSCC-CCCCSTTCSEEE
T ss_pred CCCCCcEEEEEECCCCCcEEEEEcCCC--CEEEEEeCCceEEEEe-C-CCc--e-----eeEecCCc-ccccCCCCCcee
Confidence 4578999999999998 999999999 6 99999999999986 3 232 1 23455553 466678999999
Q ss_pred eEeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCC
Q 005419 274 IAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKP 353 (697)
Q Consensus 274 iAfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~ 353 (697)
|||||+|++|++|||+|+..... | ....+|+||+.+.. ....
T Consensus 71 ia~~pdf~~~g~lYv~~~~~~~~-------------------------g----~~~~~v~r~~~~~~---------~~~~ 112 (353)
T 2g8s_A 71 VVLAPDFAQSRRIWLSYSEVGDD-------------------------G----KAGTAVGYGRLSDD---------LSKV 112 (353)
T ss_dssp EEECTTHHHHCEEEEEEEEECSS-------------------------S----CEEEEEEEEEECTT---------SSBE
T ss_pred EEECCCCCCCCEEEEEEeCCCCC-------------------------C----CceeEEEEEEECCC---------CCCC
Confidence 99999999999999999864211 1 01368999998643 1122
Q ss_pred CceEEEEeeccCC---CCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCC
Q 005419 354 LEVRRILTMGLHF---TSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLW 430 (697)
Q Consensus 354 ~~~r~Il~~~~P~---~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~ 430 (697)
.+.++|++ .+|. ..|++++|+|+| ||+|||++||.++. + .+|+++++.|||+||++||
T Consensus 113 ~~~~~i~~-~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~--~--~~q~~~~~~g~I~ri~~dG------------- 173 (353)
T 2g8s_A 113 TDFRTVFR-QMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQR--P--TAQDLDKLQGKLVRLTDQG------------- 173 (353)
T ss_dssp EEEEEEEE-CSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCG--G--GGGCTTSCTTEEEEEETTS-------------
T ss_pred CceEEEEE-ECCCCCCCcccCccEEECC-CCcEEEEECCCCCC--C--ccCCCCCCCeEEEEECCCC-------------
Confidence 35566765 5663 579999999999 99999999998762 2 7899999999999999998
Q ss_pred CCccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCC
Q 005419 431 GNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSS 510 (697)
Q Consensus 431 g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~ 510 (697)
+||+||||++.++..+||||+|||||||++||+.++ +||++|+|++.+||||+|++|+|||||.+++...|+....
T Consensus 174 ---~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g-~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~ 249 (353)
T 2g8s_A 174 ---EIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSN-ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKI 249 (353)
T ss_dssp ---CCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTT-EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCC
T ss_pred ---CCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCC-CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCcc
Confidence 799999999988889999999999999999999777 6999999999999999999999999999998766653211
Q ss_pred CCCCCCCCCCCCccceeeecCCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEe
Q 005419 511 PGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLS 590 (697)
Q Consensus 511 p~g~~~~~~~~~~~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~ 590 (697)
+.. .......++.|++.|.|. .|++|+.||+|.+||+++|++|++|+..++||.+..+ .|.....+.
T Consensus 250 ~~~-~~~~~~~~~~P~~~~~~~--------~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~---~~~~~~~~~- 316 (353)
T 2g8s_A 250 PEA-KGEIVAGTEQPVFYWKDS--------PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVN---GDKVTEDGR- 316 (353)
T ss_dssp TTC-CBSSCTTSCCCSEEESSC--------CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEE---TTEEEEEEE-
T ss_pred Ccc-cCCCCCCccCCeEEeCCC--------cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeC---CCeEeeeEE-
Confidence 110 001112468899999763 7999999999999999999999999999999998764 232221111
Q ss_pred eccCCCCCcccccccccccCCCCceeeEEEcCCCcEEEEec---CeEEEEec
Q 005419 591 VSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLAS---NGVYRVVR 639 (697)
Q Consensus 591 f~~~~~~p~~c~~~~g~~~~~~grI~sf~ed~dGeLYvlts---~gIYRIv~ 639 (697)
++.+ ..+||++|++++||+|||+++ +.||||++
T Consensus 317 ------------~~~~----~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 317 ------------ILTD----RGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp ------------ESGG----GCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred ------------cccC----CCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 1111 246999999999999999965 35999985
No 3
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=100.00 E-value=4.9e-53 Score=468.40 Aligned_cols=356 Identities=22% Similarity=0.380 Sum_probs=259.3
Q ss_pred CCCCCcEEEEEecCce--eeEEECCCCCceEEEEecCc-eEEEEecCCCCCCCcccccCCCCccCccccee-eccCCcee
Q 005419 197 SPPSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQDG-KTWLATVPEPGSGSKLELDESNPFLDLTDQVH-ADVELGMM 272 (697)
Q Consensus 197 ~~p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G-~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~-~~~e~GLL 272 (697)
+.|+||.+|+|++||. |.|++.||| ||||+|+.| +|++++ +++|. . ++++++...+. ..+|+|||
T Consensus 12 ~~~~gf~~~~~a~~l~~P~~~a~~pdG--~l~V~e~~gg~I~~~~-~~~g~--~------~~~~~~~~~~~~~~g~~Gll 80 (454)
T 1cru_A 12 AKSENFDKKVILSNLNKPHALLWGPDN--QIWLTERATGKILRVN-PESGS--V------KTVFQVPEIVNDADGQNGLL 80 (454)
T ss_dssp CCCTTSCEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCC--E------EEEEECTTCCCCTTSSCSEE
T ss_pred CCCCCeEEEEEECCCCCceEEEEcCCC--cEEEEEcCCCEEEEEE-CCCCc--E------eEEecCCccccccCCCCcee
Confidence 4578999999999998 999999999 799999986 799885 33332 1 23344433221 24799999
Q ss_pred eeEeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccC
Q 005419 273 GIAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVK 352 (697)
Q Consensus 273 GiAfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~ 352 (697)
||||||+|++|++|||+|+....... + ... ....+|+||+.+.. ..+
T Consensus 81 gia~~Pdf~~~g~lYv~~s~~~~~~~---------------------~-~~~--~~~~~v~r~~~~~~---------~~~ 127 (454)
T 1cru_A 81 GFAFHPDFKNNPYIYISGTFKNPKST---------------------D-KEL--PNQTIIRRYTYNKS---------TDT 127 (454)
T ss_dssp EEEECTTTTTSCEEEEEEEEECTTC------------------------CCS--CEEEEEEEEEEETT---------TTE
T ss_pred EEEECCCcCcCCEEEEEEeccccCCC---------------------c-ccc--ccccEEEEEEECCC---------CCC
Confidence 99999999999999999996422110 0 000 01469999998643 112
Q ss_pred CCceEEEEeeccCC-CCccceeeEeCCCCCeEEEEecCCCCCC-----CCc----------cccccccCCCceEEEEecC
Q 005419 353 PLEVRRILTMGLHF-TSHHGGQILFGPEDGHLYFMVGDGEGRG-----DPY----------NFSQNKKSLLGKIMRLDVD 416 (697)
Q Consensus 353 ~~~~r~Il~~~~P~-~~H~GG~L~FGP~DG~LYis~GDgg~~~-----DP~----------~~aQn~~sl~GKILRIdvD 416 (697)
..++++|++ .+|. ..|++++|+|+| ||+|||++||+++.. +|. ..+|++.+++||||||++|
T Consensus 128 ~~~~~~i~~-~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~d 205 (454)
T 1cru_A 128 LEKPVDLLA-GLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLD 205 (454)
T ss_dssp EEEEEEEEE-EECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTT
T ss_pred cCCcEEEEE-cCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCC
Confidence 235566775 4565 469999999999 999999999987531 121 1489999999999999999
Q ss_pred CCCcccccccccCCCCccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCc
Q 005419 417 KIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGW 496 (697)
Q Consensus 417 g~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGW 496 (697)
| +||+||||++ ++++||||+|||||+||+||+ ++ +||++|+|++..||||+|++|+||||
T Consensus 206 G----------------~ip~~Npf~~--~~~~ei~a~G~RNp~gla~dp-~G-~L~~~d~g~~~~dein~i~~G~nYGW 265 (454)
T 1cru_A 206 G----------------SIPKDNPSFN--GVVSHIYTLGHRNPQGLAFTP-NG-KLLQSEQGPNSDDEINLIVKGGNYGW 265 (454)
T ss_dssp S----------------CCCTTCCEET--TEECSEEEBCCSEEEEEEECT-TS-CEEEEEECSSSCEEEEECCTTCBCCT
T ss_pred C----------------CCCCCCCCCC--CCcceEEEECCCCcceEEECC-CC-CEEEEecCCCCCeEEEEecCCCCCCC
Confidence 8 7999999985 568899999999999999999 56 59999999999999999999999999
Q ss_pred ccccCCCCC-----------------CCCCCC----CCCC-----CCCCCCCccceeeec-------CCccCC------C
Q 005419 497 RVYEGPFRY-----------------NPPSSP----GGNT-----SASSINPIFPVMGYN-------HSEVNK------A 537 (697)
Q Consensus 497 P~~eG~~~~-----------------~p~~~p----~g~~-----~~~~~~~~~Pi~~y~-------H~~~~~------~ 537 (697)
|.++|.... .+.+.+ .+.. ......++.|++.|. |.+... -
T Consensus 266 P~~~G~~~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~p~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~G~~~~~~ 345 (454)
T 1cru_A 266 PNVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYIC 345 (454)
T ss_dssp TTCSSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGG
T ss_pred CceecCcccCccccccccccccccccccccCCcccCccccccccccccCCCcCCCceecccccccccccccccccccccc
Confidence 999874211 111111 0000 000124678888652 221000 0
Q ss_pred CCCcccceeEeecCC--CCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccccccCCCCce
Q 005419 538 EGSASITGGYFYRSQ--TDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPSLGFI 615 (697)
Q Consensus 538 ~Gs~S~tGg~vYrG~--~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~~~~grI 615 (697)
.++.|++|+.||+|. .+|+|+|.+|++++..++|+.+..++++ +.++.+... ++. .++||
T Consensus 346 ~~~~ap~G~~fy~g~~~~~~~~~g~lfv~~~~~~~i~~v~l~~~g-~~~~~~~~~------------~~~-----~~~R~ 407 (454)
T 1cru_A 346 WPTVAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTY-STTYDDAVP------------MFK-----SNNRY 407 (454)
T ss_dssp SSCCCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTS-SSEEEEEEE------------ESC-----CSSCE
T ss_pred cCccCcceeEEeCCCCccCcccCCcEEEeecCCCEEEEEEECCCC-Ceeeeeeee------------ecc-----cCCCc
Confidence 246899999999998 5678999999999999999999876432 124333221 111 25799
Q ss_pred eeEEEcCCCc-EEEEecC--eEEE
Q 005419 616 TSFGQDNRKD-IYLLASN--GVYR 636 (697)
Q Consensus 616 ~sf~ed~dGe-LYvlts~--gIYR 636 (697)
+++.++|||+ |||++++ .|||
T Consensus 408 ~dv~~gpDG~~Lyv~~d~~G~i~~ 431 (454)
T 1cru_A 408 RDVIASPDGNVLYVLTDTAGNVQK 431 (454)
T ss_dssp EEEEECTTSSCEEEEECSSCCEEC
T ss_pred eeEEECCCCCEEEEEECCCCCCcc
Confidence 9999999998 9999973 2554
No 4
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=100.00 E-value=3e-53 Score=456.21 Aligned_cols=312 Identities=23% Similarity=0.406 Sum_probs=246.0
Q ss_pred CCCcEEEEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeE
Q 005419 199 PSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIA 275 (697)
Q Consensus 199 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiA 275 (697)
.+...+|+|++||. |.|++.||| ||||+|| .|+|++++ ++++. . +++..+ +.|...+|.||||||
T Consensus 19 ~~~~~~~~va~gL~~P~~ia~~pdG--~llVter~~G~I~~v~-~~~g~--~------~~v~~~-~~v~~~g~~GllGia 86 (347)
T 3das_A 19 GSVKVLRTVATGLNSPWGLAPLPGG--DLLVSSRDEATITRVD-AKTGR--K------TELGEV-PGVSPSGEGGLLGIA 86 (347)
T ss_dssp CCEEEEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCC--E------EEEEEC-TTCCCBTTBSEEEEE
T ss_pred CCCceeEEeecCCCCceEEEEcCCC--cEEEEEecCCEEEEEE-CCCCc--E------eeeccc-CceeecCCCCceeeE
Confidence 34689999999998 999999999 6999999 89999985 33332 1 122222 356678899999999
Q ss_pred eCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCc
Q 005419 276 FHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLE 355 (697)
Q Consensus 276 fhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~ 355 (697)
|||+|++||+|||+|+... ..+|+||++++. ++ ......+
T Consensus 87 ~~Pdf~~~g~lYv~yt~~~----------------------------------~~~v~R~~~~~~---~~---~~~~~~~ 126 (347)
T 3das_A 87 LSPDYASDHMVYAYFTSAS----------------------------------DNRIVRMLYDEK---KP---SGEQLGA 126 (347)
T ss_dssp ECTTHHHHCEEEEEEECSS----------------------------------SEEEEEEEBCTT---SC---TTCCBCC
T ss_pred eccccccCCEEEEEEecCC----------------------------------CCEEEEEEeCCC---Cc---ccccCCC
Confidence 9999999999999998431 258999998653 01 0123445
Q ss_pred eEEEEeeccCC-CCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCcc
Q 005419 356 VRRILTMGLHF-TSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYS 434 (697)
Q Consensus 356 ~r~Il~~~~P~-~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Ys 434 (697)
.++|++ ++|. ..|++++|+|+| ||+|||++||.++. ..+|++++++|||+||++|| +
T Consensus 127 ~~~i~~-~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~----~~~qd~~~~~G~IlRi~~dG----------------~ 184 (347)
T 3das_A 127 PDTVFR-GIPKGVIHNGGRIAFGP-DKMLYAGTGESGDT----GLSQDRKSLGGKILRMTPDG----------------E 184 (347)
T ss_dssp CEEEEE-EECCCSSCCCCCEEECT-TSCEEEECBCTTCG----GGTTCTTCSTTCEEEECTTS----------------S
T ss_pred cEEEEE-cCCCCCCccCccccCCC-CCCEEEEECCCCCC----ccccCCCCCCCEEEEEeCCC----------------C
Confidence 677876 4664 579999999999 99999999998764 46899999999999999998 7
Q ss_pred CCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCCCC
Q 005419 435 IPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGN 514 (697)
Q Consensus 435 IP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~g~ 514 (697)
||+||||++ .||||+|||||+|++||+ ++ .||++|+|++..||||+|++|+|||||+++|...
T Consensus 185 ip~~nPf~~-----~~i~a~G~RNp~Gla~dp-~G-~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~---------- 247 (347)
T 3das_A 185 PAPGNPFPG-----SPVYSYGHRNVQGLAWDD-KQ-RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGG---------- 247 (347)
T ss_dssp BCTTCSSTT-----CCEEEBCCSBCCEEEECT-TC-CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCC----------
T ss_pred ccCCCCCCC-----CeEEeeCCCCcceEEECC-CC-CEEEEecCCCCCceeeEEcCCCEecCCcccCCCC----------
Confidence 999999975 589999999999999999 46 5999999999999999999999999999987521
Q ss_pred CCCCCCCCccceeeecCCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccC
Q 005419 515 TSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCD 594 (697)
Q Consensus 515 ~~~~~~~~~~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~ 594 (697)
...++.|++.|.|. +.|++|+.||+| ..|++++..++||++..+.. +..
T Consensus 248 ----~~~~~~P~~~~~~~-------~~ap~G~~~~~g--------~~~~~~l~~~~l~~v~~~~~--~~~---------- 296 (347)
T 3das_A 248 ----GSGFHDPVAQWSTD-------EASPSGIAYAEG--------SVWMAGLRGERLWRIPLKGT--AAA---------- 296 (347)
T ss_dssp ----CTTCCCCSEEECTT-------TCCEEEEEEETT--------EEEEEESTTCSEEEEEEETT--EES----------
T ss_pred ----CccccCCcEecCCC-------CCCCcceEEEcC--------ceeeccccCCEEEEEEecCC--cee----------
Confidence 11378899999753 369999999975 45667777788888876432 100
Q ss_pred CCCCcccccccccccCCCCceeeEEEcCCCcEEEEecC------------eEEEEec
Q 005419 595 RDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLASN------------GVYRVVR 639 (697)
Q Consensus 595 ~~~p~~c~~~~g~~~~~~grI~sf~ed~dGeLYvlts~------------gIYRIv~ 639 (697)
. .+..++.+ .++||+++.+++||+|||++++ +|+||+.
T Consensus 297 ~---~~e~~l~~----~~gR~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 297 A---DPQAFLEG----EYGRLRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEV 346 (347)
T ss_dssp S---CCEEESTT----TSSCEEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred c---ceEEeecC----CCCCccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeC
Confidence 0 00112233 3689999999999999999862 5999974
No 5
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=100.00 E-value=2.8e-51 Score=439.54 Aligned_cols=323 Identities=25% Similarity=0.433 Sum_probs=256.8
Q ss_pred CCCCCcEEEEEecCce--eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeee
Q 005419 197 SPPSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGI 274 (697)
Q Consensus 197 ~~p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGi 274 (697)
+.+.+|++|+|++||. +.|++.||| ||||+|+.|+|++++ .+|. +++.++. |...++.|++||
T Consensus 14 ~~~~~~~~~~va~~l~~P~~ia~~pdG--~l~V~e~~g~I~~~d--~~G~---------~~~~~~~--v~~~g~~g~~gi 78 (354)
T 3a9g_A 14 SEEWKFKISEVASDLEVPWSIAPLGGG--RYLVTERPGRLVLIS--PSGK---------KLVASFD--VANVGEAGLLGL 78 (354)
T ss_dssp --CCCEEEEEEECSCSCEEEEEEEETT--EEEEEETTTEEEEEC--SSCE---------EEEEECC--CCCSTTCSEEEE
T ss_pred CCCCCeEEEEEeCCCCCCeEEEEcCCC--eEEEEeCCCEEEEEe--CCCc---------eEeeccc--eeecCCCceeeE
Confidence 3467999999999998 999999999 799999999999984 2332 1233442 455678999999
Q ss_pred EeCCCCCcCCeEEEEEee-cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCC
Q 005419 275 AFHPNFQQNGRFFVSFNC-DKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKP 353 (697)
Q Consensus 275 AfhPdF~~NG~~YvsYs~-~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~ 353 (697)
||||+|++||+|||+|+. .... ....+|.||+.++. ....
T Consensus 79 a~~pdf~~~g~lyv~~~~~~~~~------------------------------~~~~~v~r~~~~~~---------~~~~ 119 (354)
T 3a9g_A 79 ALHPEFPKKSWVYLYASYFAEGG------------------------------HIRNRVIRGRLDGS---------TFKL 119 (354)
T ss_dssp EECTTTTTSCEEEEEEEEECGGG------------------------------CEEEEEEEEEECSS---------SCCE
T ss_pred EeCCCCCcCCEEEEEEeccCCCC------------------------------CcceEEEEEEECCC---------CcCc
Confidence 999999999999999985 2110 01368999998643 1123
Q ss_pred CceEEEEeeccCC-CCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCC
Q 005419 354 LEVRRILTMGLHF-TSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGN 432 (697)
Q Consensus 354 ~~~r~Il~~~~P~-~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~ 432 (697)
.+.++|++ ++|. ..|+++.|+|+| ||+|||++||.++ + ..+|++.++.|||+||++||
T Consensus 120 ~~~~~l~~-~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~---~-~~~~d~~~~~G~I~ri~~dG--------------- 178 (354)
T 3a9g_A 120 KEVKTLID-GIPGAYIHNGGRIRFGP-DGMLYITTGDAAD---P-RLAQDLSSLAGKILRVDEEG--------------- 178 (354)
T ss_dssp EEEEEEEE-EEECCSSCCCCCEEECT-TSCEEEECCCTTC---G-GGGTCTTCCSSEEEEECTTS---------------
T ss_pred CccEEEEE-cCCCCCCcCCceEEECC-CCcEEEEECCCCC---C-ccccCCCCCCeEEEEEcCCC---------------
Confidence 34566665 4553 579999999999 9999999999764 2 46899999999999999998
Q ss_pred ccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCC
Q 005419 433 YSIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPG 512 (697)
Q Consensus 433 YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~ 512 (697)
+||.||||. .+||||+|||||+|++||+.++ +||++|+|++.+||||+|++|+|||||.++|....
T Consensus 179 -~~p~~npf~-----~~~i~a~G~rnp~Gla~d~~~g-~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~------- 244 (354)
T 3a9g_A 179 -RPPADNPFP-----NSPIWSYGHRNPQGIDWHRASG-VMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGR------- 244 (354)
T ss_dssp -CCCTTSSST-----TCCEEEECCSCCCEEEECTTTC-CEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCC-------
T ss_pred -CCCCCCCCC-----CCcEEEEccCCcceEEEeCCCC-CEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCC-------
Confidence 799999995 4799999999999999999777 59999999999999999999999999999875321
Q ss_pred CCCCCCCCCCccceeeecCCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeec
Q 005419 513 GNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVS 592 (697)
Q Consensus 513 g~~~~~~~~~~~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~ 592 (697)
..++.|++.|++ .+.|++|+.||+|.+||+++|++|++|+..++||.+..+. .|.....+.
T Consensus 245 -------~~~~~p~~~~~~-------~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~--~g~~~~~~~--- 305 (354)
T 3a9g_A 245 -------GEFVDPVIDTGS-------ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD--NMEVRKIST--- 305 (354)
T ss_dssp -------TTSCCCSEECTT-------CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG--GGCEEEEEE---
T ss_pred -------CCCcCCEeecCC-------CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC--CCcccceee---
Confidence 125689999953 2479999999999999999999999999999999998654 233321111
Q ss_pred cCCCCCcccccccccccCCCCceeeEEEcCCCcEEEEec---C---------eEEEEecCC
Q 005419 593 CDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLAS---N---------GVYRVVRPS 641 (697)
Q Consensus 593 ~~~~~p~~c~~~~g~~~~~~grI~sf~ed~dGeLYvlts---~---------gIYRIv~ps 641 (697)
++.+ ..+||+++++++||+|||+++ + +||||.+..
T Consensus 306 ----------~~~~----~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 306 ----------FFKN----VFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp ----------ECTT----TSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred ----------eccC----CCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 1111 257999999999999999985 2 699998754
No 6
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=5.1e-47 Score=405.13 Aligned_cols=313 Identities=25% Similarity=0.431 Sum_probs=245.2
Q ss_pred CCCcEEEEEecCce--eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEe
Q 005419 199 PSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAF 276 (697)
Q Consensus 199 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAf 276 (697)
...+.+|+|++||. +.|++.||| ||||+|+.|+|++++ ++. .+++.++. |...++.|++||||
T Consensus 18 ~~~~~~~~va~~l~~P~~ia~~pdG--~l~V~e~~g~I~~i~---~g~--------~~~~~~~~--v~~~g~~~p~gia~ 82 (352)
T 2ism_A 18 GQGLRVEEVVGGLEVPWALAFLPDG--GMLIAERPGRIRLFR---EGR--------LSTYAELS--VYHRGESGLLGLAL 82 (352)
T ss_dssp --CCCEEEEECCCSCEEEEEECTTS--CEEEEETTTEEEEEE---TTE--------EEEEEECC--CCCSTTCSEEEEEE
T ss_pred cCCcEEEEEECCCCCceEEEEcCCC--eEEEEeCCCeEEEEE---CCC--------ccEeecce--EeecCCCCceeEEE
Confidence 34689999999998 999999999 799999999999985 232 12344443 55667899999999
Q ss_pred CCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCce
Q 005419 277 HPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEV 356 (697)
Q Consensus 277 hPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~ 356 (697)
||+|++|++|||+|+.... ....+|.||+.++. ...+.
T Consensus 83 ~pdf~~~g~lYv~~~~~~~-------------------------------~~~~~v~r~~~~~~-----------~~~~~ 120 (352)
T 2ism_A 83 HPRFPQEPYVYAYRTVAEG-------------------------------GLRNQVVRLRHLGE-----------RGVLD 120 (352)
T ss_dssp CTTTTTSCEEEEEEEECTT-------------------------------SSEEEEEEEEECSS-----------CEEEE
T ss_pred CCCCCCCCEEEEEEecCCC-------------------------------CCccEEEEEEeCCC-----------CcCce
Confidence 9999999999999985321 01368999998532 12245
Q ss_pred EEEEeeccC---CCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCc
Q 005419 357 RRILTMGLH---FTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNY 433 (697)
Q Consensus 357 r~Il~~~~P---~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 433 (697)
++|++ ++| ...|+++.|+|+| ||+|||++||.++. ..+|++.++.|||+||++||
T Consensus 121 ~~l~~-~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~----~~~~d~~~~~g~I~ri~~dG---------------- 178 (352)
T 2ism_A 121 RVVLD-GIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYER----ELAQDLASLGGKILRLTPEG---------------- 178 (352)
T ss_dssp EEEEE-EECCCTTCCCCCCCEEECT-TSCEEEECCCTTCG----GGGGCTTCSSSEEEEECTTS----------------
T ss_pred EEEEE-eCCCCCCCCcCCceEEECC-CCCEEEEECCCCCC----ccccCCCCCceEEEEEcCCC----------------
Confidence 56665 456 3579999999999 99999999997642 46899999999999999998
Q ss_pred cCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCC-----ceeeEEeccCCCCCcccccCCCCCCCC
Q 005419 434 SIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDE-----YEEVDIVTKGGNYGWRVYEGPFRYNPP 508 (697)
Q Consensus 434 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~-----~EEIn~I~kG~NYGWP~~eG~~~~~p~ 508 (697)
+||+||||++..+.++||||+|||||++++||+.++ +||++|+|++. +||||+|++|+|||||.++|....
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g-~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~--- 254 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTG-ELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND--- 254 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTC-CEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC---
T ss_pred CCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCC-CEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC---
Confidence 799999999988889999999999999999999777 59999999998 899999999999999999884210
Q ss_pred CCCCCCCCCCCCCCccceeeecCCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEE
Q 005419 509 SSPGGNTSASSINPIFPVMGYNHSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTK 588 (697)
Q Consensus 509 ~~p~g~~~~~~~~~~~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~ 588 (697)
..++.|++.|++ +.++.|+.||+| .++++|+..++||.+..+... ..|+...
T Consensus 255 -----------~~~~~p~~~~~~--------~~ap~G~~~~~G--------~l~v~~~~~~~v~~v~~~~~~-~~~~~~~ 306 (352)
T 2ism_A 255 -----------PRYRDPLYFWPQ--------GFPPGNLAFFRG--------DLYVAGLRGQALLRLVLEGER-GRWRVLR 306 (352)
T ss_dssp -----------TTSCCCSEECTT--------CCCEEEEEEETT--------EEEEEETTTTEEEEEEEEEET-TEEEEEE
T ss_pred -----------CCCcCCeEecCC--------CCCCcceEEECC--------EEEEEECCCCEEEEEEECCCC-cceeecc
Confidence 125679999954 379999999754 678999999999998765332 1232111
Q ss_pred EeeccCCCCCcccccccccccCCCCceeeEEEcCCCcEEEEec---C---------eEEEEe
Q 005419 589 LSVSCDRDSPIQCDTVKGSSFPSLGFITSFGQDNRKDIYLLAS---N---------GVYRVV 638 (697)
Q Consensus 589 i~f~~~~~~p~~c~~~~g~~~~~~grI~sf~ed~dGeLYvlts---~---------gIYRIv 638 (697)
. ..++ ..++||++++++|||+|||+++ + +||||+
T Consensus 307 ~-----------~~~~-----~~~~rp~~v~~~pdG~lyv~~~~~~g~g~~~~~~~~i~ri~ 352 (352)
T 2ism_A 307 V-----------ETAL-----SGFGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL 352 (352)
T ss_dssp E-----------EEEE-----ESSCCEEEEEECTTSCEEEEECSTTTTSCCCTTCSCEEEEC
T ss_pred h-----------heec-----ccCCCeeEEEECCCCcEEEEEeCCCCCCCCCCCCCEEEEeC
Confidence 1 0011 1257999999999999999986 2 599985
No 7
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.55 E-value=9.6e-05 Score=73.96 Aligned_cols=174 Identities=14% Similarity=0.134 Sum_probs=99.8
Q ss_pred EEEEecCce--eeEEECCCCCceEEEE--------ecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceee
Q 005419 204 LEKVGTGAY--LNMVPHPDGSNRVFLS--------NQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMG 273 (697)
Q Consensus 204 le~va~Gl~--~~m~~~pDGs~RlfV~--------Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLG 273 (697)
.++|+.++. ..+++.+|| ++||+ ...|.|++++ ++.+. ... +.. +.. ........+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~~i~~~d-~~~g~--~~~------~~~--~~~-~~~~~~~~~ 75 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFDKNG--DFYIVAPEVEVNGKPAGEILRID-LKTGK--KTV------ICK--PEV-NGYGGIPAG 75 (314)
T ss_dssp CEEEECCCTTCEEEEECTTS--CEEEEETTCEETTEECCEEEEEC-TTTCC--EEE------EEC--CEE-TTEECCEEE
T ss_pred HhhhhccCCCccCceECCCC--CEEEEEeccccCCCCCCEEEEEe-CCCCc--EEE------EEe--ccc-CCCCCCCce
Confidence 466787877 789999988 69999 4678899885 23332 111 100 000 001235789
Q ss_pred eEeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCC
Q 005419 274 IAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKP 353 (697)
Q Consensus 274 iAfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~ 353 (697)
|+++|+ +|++||.-.. ..|.+|..+ .
T Consensus 76 i~~~~~---~g~l~v~~~~-------------------------------------~~l~~~d~~-g------------- 101 (314)
T 1pjx_A 76 CQCDRD---ANQLFVADMR-------------------------------------LGLLVVQTD-G------------- 101 (314)
T ss_dssp EEECSS---SSEEEEEETT-------------------------------------TEEEEEETT-S-------------
T ss_pred EEEecC---CCcEEEEECC-------------------------------------CCEEEEeCC-C-------------
Confidence 999973 3889886421 145556543 1
Q ss_pred CceEEE-EeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCC
Q 005419 354 LEVRRI-LTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGN 432 (697)
Q Consensus 354 ~~~r~I-l~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~ 432 (697)
+.+.+ ...........-..|.|++ ||.|||+....+.. +.+.........+.|+|+++++.
T Consensus 102 -~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~g~-------------- 163 (314)
T 1pjx_A 102 -TFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVA--PADYTRSMQEKFGSIYCFTTDGQ-------------- 163 (314)
T ss_dssp -CEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCT--TSCCCBTTSSSCEEEEEECTTSC--------------
T ss_pred -CEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccc--cccccccccCCCCeEEEECCCCC--------------
Confidence 12222 1100000112344799999 99999987543211 11111222345688999987651
Q ss_pred ccCCCCCCCCCCCCCCCeEEEeccccceeeeec----CCCCCeEEEEEcCCC
Q 005419 433 YSIPADNPYSEDKQLQPEIWALGFRNPWRCSFD----AERPSYFLCADVGQD 480 (697)
Q Consensus 433 YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD----p~~g~~L~~~DvG~d 480 (697)
.+.+..++..|.+++|+ +.. ..||++|.+.+
T Consensus 164 ----------------~~~~~~~~~~~~~i~~~~~~d~dg-~~l~v~~~~~~ 198 (314)
T 1pjx_A 164 ----------------MIQVDTAFQFPNGIAVRHMNDGRP-YQLIVAETPTK 198 (314)
T ss_dssp ----------------EEEEEEEESSEEEEEEEECTTSCE-EEEEEEETTTT
T ss_pred ----------------EEEeccCCCCcceEEEecccCCCC-CEEEEEECCCC
Confidence 13344567788999999 864 36999987643
No 8
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.51 E-value=1.9e-05 Score=81.66 Aligned_cols=27 Identities=11% Similarity=0.272 Sum_probs=22.1
Q ss_pred CCceeeEEEcCCCcEEEEec--CeEEEEe
Q 005419 612 LGFITSFGQDNRKDIYLLAS--NGVYRVV 638 (697)
Q Consensus 612 ~grI~sf~ed~dGeLYvlts--~gIYRIv 638 (697)
...+.+++.++||.|||++. +.|+++.
T Consensus 291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 291 FDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp CSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred cCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 45789999999999999986 3577765
No 9
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.50 E-value=9.5e-05 Score=74.33 Aligned_cols=176 Identities=16% Similarity=0.148 Sum_probs=100.5
Q ss_pred CCCcEEEEEecCce--eeEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeE
Q 005419 199 PSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIA 275 (697)
Q Consensus 199 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiA 275 (697)
.++..+++++.++. .++++.|||. ++|+++ ..|.|++++ ++.+ ++ +.........+|+
T Consensus 15 ~~~~~~~~l~~~~~~~eg~~~d~~g~-~l~~~~~~~~~i~~~~-~~~~----~~-------------~~~~~~~~~~~l~ 75 (296)
T 3e5z_A 15 PAGAEARRLADGFTWTEGPVYVPARS-AVIFSDVRQNRTWAWS-DDGQ----LS-------------PEMHPSHHQNGHC 75 (296)
T ss_dssp CTTCCCEEEECCCSSEEEEEEEGGGT-EEEEEEGGGTEEEEEE-TTSC----EE-------------EEESSCSSEEEEE
T ss_pred CCCCcEEEEecCCccccCCeEeCCCC-EEEEEeCCCCEEEEEE-CCCC----eE-------------EEECCCCCcceee
Confidence 34667788888877 7899999984 477666 578999886 3321 11 1112234578999
Q ss_pred eCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCc
Q 005419 276 FHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLE 355 (697)
Q Consensus 276 fhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~ 355 (697)
++| +|.+|+.-..+ ..|.+|..... +
T Consensus 76 ~~~----dg~l~v~~~~~------------------------------------~~i~~~d~~~g--------------~ 101 (296)
T 3e5z_A 76 LNK----QGHLIACSHGL------------------------------------RRLERQREPGG--------------E 101 (296)
T ss_dssp ECT----TCCEEEEETTT------------------------------------TEEEEECSTTC--------------C
T ss_pred ECC----CCcEEEEecCC------------------------------------CeEEEEcCCCC--------------c
Confidence 997 68888764210 24555543111 2
Q ss_pred eEEEEeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccC
Q 005419 356 VRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSI 435 (697)
Q Consensus 356 ~r~Il~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsI 435 (697)
.+.+..............|.|+| ||.||++....+...+............|+|+|+++++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~----------------- 163 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT----------------- 163 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-----------------
T ss_pred EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-----------------
Confidence 22332210000112234699999 999999742101000000000111223578999988751
Q ss_pred CCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCC
Q 005419 436 PADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 436 P~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d 480 (697)
.+.+.-++..|.+++|+|.. ..| ++|.+.+
T Consensus 164 -------------~~~~~~~~~~~~gi~~s~dg-~~l-v~~~~~~ 193 (296)
T 3e5z_A 164 -------------LSAPIRDRVKPNGLAFLPSG-NLL-VSDTGDN 193 (296)
T ss_dssp -------------EEEEECCCSSEEEEEECTTS-CEE-EEETTTT
T ss_pred -------------EEEeecCCCCCccEEECCCC-CEE-EEeCCCC
Confidence 23456677889999999975 345 7776554
No 10
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.50 E-value=4.8e-05 Score=75.11 Aligned_cols=233 Identities=13% Similarity=0.146 Sum_probs=133.9
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|+..++| ++||++. .+.|++++ ++ +. ...+ .+ ........+|+++| +|.+||.-.
T Consensus 65 ~~i~~~~~g--~l~v~~~~~~~v~~~d-~~-g~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 122 (300)
T 2qc5_A 65 MCLIVSSLG--DIWFTENGANKIGKLS-KK-GG--FTEY-------PL-----PQPDSGPYGITEGL----NGDIWFTQL 122 (300)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SC--EEEE-------EC-----SSTTCCEEEEEECS----TTCEEEEET
T ss_pred eeEEECCCC--CEEEEecCCCeEEEEC-CC-CC--eEEe-------cC-----CCCCCCCccceECC----CCCEEEEcc
Confidence 678888888 6999987 68898875 33 32 1110 00 11225678999996 688988632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
.. ..|.+|..++ +.+.+ .++.....-
T Consensus 123 ~~------------------------------------~~i~~~~~~g---------------~~~~~---~~~~~~~~~ 148 (300)
T 2qc5_A 123 NG------------------------------------DRIGKLTADG---------------TIYEY---DLPNKGSYP 148 (300)
T ss_dssp TT------------------------------------TEEEEECTTS---------------CEEEE---ECSSTTCCE
T ss_pred CC------------------------------------CeEEEECCCC---------------CEEEc---cCCCCCCCc
Confidence 10 2455554321 11211 233333445
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|.+++ ||.||++.-. .++|.|+++++.. ..+.+|
T Consensus 149 ~~i~~d~-~g~l~v~~~~-----------------~~~i~~~~~~g~~-----------~~~~~~--------------- 184 (300)
T 2qc5_A 149 AFITLGS-DNALWFTENQ-----------------NNSIGRITNTGKL-----------EEYPLP--------------- 184 (300)
T ss_dssp EEEEECT-TSSEEEEETT-----------------TTEEEEECTTCCE-----------EEEECS---------------
T ss_pred eeEEECC-CCCEEEEecC-----------------CCeEEEECCCCcE-----------EEeeCC---------------
Confidence 6799999 9999997632 2468888886520 011111
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCccceeeecC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNH 531 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y~H 531 (697)
.++.+|.++++|+. + +||+++.+.+ .|.++...+. +. .+..+
T Consensus 185 --~~~~~~~~i~~d~~-g-~l~v~~~~~~---~i~~~~~~g~--~~----------------------------~~~~~- 226 (300)
T 2qc5_A 185 --TNAAAPVGITSGND-G-ALWFVEIMGN---KIGRITTTGE--IS----------------------------EYDIP- 226 (300)
T ss_dssp --STTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC--EE----------------------------EEECS-
T ss_pred --CCCCCcceEEECCC-C-CEEEEccCCC---EEEEEcCCCc--EE----------------------------EEECC-
Confidence 13467899999986 4 5999987643 3444332100 00 00000
Q ss_pred CccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccccccCC
Q 005419 532 SEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPS 611 (697)
Q Consensus 532 ~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~~~ 611 (697)
.+...+.+..+-. .|++++++...+.|..+. + .|.+.. +. ++ . .
T Consensus 227 ------~~~~~~~~i~~d~-------~g~l~v~~~~~~~i~~~~--~--~g~~~~--~~--------~~----~-----~ 270 (300)
T 2qc5_A 227 ------TPNARPHAITAGK-------NSEIWFTEWGANQIGRIT--N--DNTIQE--YQ--------LQ----T-----E 270 (300)
T ss_dssp ------STTCCEEEEEECS-------TTCEEEEETTTTEEEEEC--T--TSCEEE--EE--------CC----S-----T
T ss_pred ------CCCCCceEEEECC-------CCCEEEeccCCCeEEEEC--C--CCcEEE--EE--------CC----c-----c
Confidence 0113455554432 367888888778887764 3 354432 11 11 0 1
Q ss_pred CCceeeEEEcCCCcEEEEecCeEEEEec
Q 005419 612 LGFITSFGQDNRKDIYLLASNGVYRVVR 639 (697)
Q Consensus 612 ~grI~sf~ed~dGeLYvlts~gIYRIv~ 639 (697)
...+.++.+|++|.||+.+.++|+|+.+
T Consensus 271 ~~~~~~i~~~~~g~l~v~~~~~i~~~~p 298 (300)
T 2qc5_A 271 NAEPHGITFGKDGSVWFALKCKIGKLNL 298 (300)
T ss_dssp TCCCCCEEECTTSCEEEECSSEEEEEEE
T ss_pred CCccceeEeCCCCCEEEEccCceEEeCC
Confidence 2457899999999999998658988864
No 11
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.44 E-value=0.00013 Score=72.09 Aligned_cols=233 Identities=15% Similarity=0.202 Sum_probs=134.3
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|+..+|| ++||++. .|.|.+++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 23 ~~i~~d~~g--~l~v~~~~~~~v~~~~-~~-~~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 80 (300)
T 2qc5_A 23 YGITSSEDG--KVWFTQHKANKISSLD-QS-GR--IKEF-------EV-----PTPDAKVMCLIVSS----LGDIWFTEN 80 (300)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SC--EEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred ceeeECCCC--CEEEEcCCCCeEEEEC-CC-Cc--eEEE-------EC-----CCCCCcceeEEECC----CCCEEEEec
Confidence 788899998 6999995 68898875 33 22 1110 01 01224578999986 688988642
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
.. .+|.+|..++ +.+.+ ..|...+.-
T Consensus 81 ~~------------------------------------~~v~~~d~~g---------------~~~~~---~~~~~~~~~ 106 (300)
T 2qc5_A 81 GA------------------------------------NKIGKLSKKG---------------GFTEY---PLPQPDSGP 106 (300)
T ss_dssp TT------------------------------------TEEEEECTTS---------------CEEEE---ECSSTTCCE
T ss_pred CC------------------------------------CeEEEECCCC---------------CeEEe---cCCCCCCCC
Confidence 10 2555554321 12211 233333445
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|.+++ ||.|||+... .++|+|+|+++.- . .+.+|
T Consensus 107 ~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~~-----~------~~~~~--------------- 142 (300)
T 2qc5_A 107 YGITEGL-NGDIWFTQLN-----------------GDRIGKLTADGTI-----Y------EYDLP--------------- 142 (300)
T ss_dssp EEEEECS-TTCEEEEETT-----------------TTEEEEECTTSCE-----E------EEECS---------------
T ss_pred ccceECC-CCCEEEEccC-----------------CCeEEEECCCCCE-----E------EccCC---------------
Confidence 6799999 9999998532 2468888877520 0 11111
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCccceeeecC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNH 531 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y~H 531 (697)
.....|.++++|+. + +||+++.+.. .|.++...+. .. .+..+.
T Consensus 143 --~~~~~~~~i~~d~~-g-~l~v~~~~~~---~i~~~~~~g~----------------------------~~--~~~~~~ 185 (300)
T 2qc5_A 143 --NKGSYPAFITLGSD-N-ALWFTENQNN---SIGRITNTGK----------------------------LE--EYPLPT 185 (300)
T ss_dssp --STTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC----------------------------EE--EEECSS
T ss_pred --CCCCCceeEEECCC-C-CEEEEecCCC---eEEEECCCCc----------------------------EE--EeeCCC
Confidence 13457889999986 4 4999987543 3443322100 00 011110
Q ss_pred CccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccccccCC
Q 005419 532 SEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPS 611 (697)
Q Consensus 532 ~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~~~ 611 (697)
....+.++.+-. .|.+++++...+.|+.+.. .|.+.... ++ ..
T Consensus 186 -------~~~~~~~i~~d~-------~g~l~v~~~~~~~i~~~~~----~g~~~~~~----------~~---------~~ 228 (300)
T 2qc5_A 186 -------NAAAPVGITSGN-------DGALWFVEIMGNKIGRITT----TGEISEYD----------IP---------TP 228 (300)
T ss_dssp -------TTCCEEEEEECT-------TSSEEEEETTTTEEEEECT----TCCEEEEE----------CS---------ST
T ss_pred -------CCCCcceEEECC-------CCCEEEEccCCCEEEEEcC----CCcEEEEE----------CC---------CC
Confidence 112444544421 3678888887778877642 34443211 11 01
Q ss_pred CCceeeEEEcCCCcEEEEec--CeEEEEec
Q 005419 612 LGFITSFGQDNRKDIYLLAS--NGVYRVVR 639 (697)
Q Consensus 612 ~grI~sf~ed~dGeLYvlts--~gIYRIv~ 639 (697)
...+.++.+|++|.||+.+. ++|+|+..
T Consensus 229 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 34688999999999999994 57988864
No 12
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.37 E-value=0.00042 Score=70.42 Aligned_cols=155 Identities=8% Similarity=0.015 Sum_probs=93.2
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
-..++.|++. ++|+++. .++|++++ ++.+. . + + ........+||++| +|.+||..
T Consensus 16 Egp~w~~~~~-~l~~~d~~~~~i~~~d-~~~~~--~-~-------------~-~~~~~~~~~i~~~~----dG~l~v~~- 71 (297)
T 3g4e_A 16 ESPVWEEVSN-SLLFVDIPAKKVCRWD-SFTKQ--V-Q-------------R-VTMDAPVSSVALRQ----SGGYVATI- 71 (297)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEE-TTTCC--E-E-------------E-EECSSCEEEEEEBT----TSSEEEEE-
T ss_pred cCCeEECCCC-EEEEEECCCCEEEEEE-CCCCc--E-E-------------E-EeCCCceEEEEECC----CCCEEEEE-
Confidence 5778888653 7888885 68999886 33221 1 0 0 01123467899997 67788753
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
. ..|.+|..+.. +.+.+...........-
T Consensus 72 -~------------------------------------~~l~~~d~~~g--------------~~~~~~~~~~~~~~~~~ 100 (297)
T 3g4e_A 72 -G------------------------------------TKFCALNWKEQ--------------SAVVLATVDNDKKNNRF 100 (297)
T ss_dssp -T------------------------------------TEEEEEETTTT--------------EEEEEEECCTTCSSEEE
T ss_pred -C------------------------------------CeEEEEECCCC--------------cEEEEEecCCCCCCCCC
Confidence 1 14555654211 23333321110112223
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|.++| ||.||+++-.... .........|+|+|++.++. .+.
T Consensus 101 ~di~~d~-dG~l~~~~~~~~~------~~~~~~~~~~~l~~~d~~g~------------------------------~~~ 143 (297)
T 3g4e_A 101 NDGKVDP-AGRYFAGTMAEET------APAVLERHQGALYSLFPDHH------------------------------VKK 143 (297)
T ss_dssp EEEEECT-TSCEEEEEEECCS------BTTBCCTTCEEEEEECTTSC------------------------------EEE
T ss_pred CCEEECC-CCCEEEecCCccc------ccccccCCCcEEEEEECCCC------------------------------EEE
Confidence 4699999 9999997632211 11123446789999998762 133
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d 480 (697)
...++..|.+++|+|.. ..||++|...+
T Consensus 144 ~~~~~~~pngi~~spdg-~~lyv~~~~~~ 171 (297)
T 3g4e_A 144 YFDQVDISNGLDWSLDH-KIFYYIDSLSY 171 (297)
T ss_dssp EEEEESBEEEEEECTTS-CEEEEEEGGGT
T ss_pred EeeccccccceEEcCCC-CEEEEecCCCC
Confidence 55677889999999975 46999998654
No 13
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.34 E-value=0.00027 Score=77.37 Aligned_cols=276 Identities=16% Similarity=0.146 Sum_probs=143.2
Q ss_pred eeEEECCC-CCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPD-GSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pD-Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|++.|+ ..++|||++..++|++++ ++.+. +. ..........+||++| +|.+||.-.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id-~~~g~---v~-------------~~~~~~~~P~giavd~----dG~lyVad~ 200 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVD-FVNQY---VD-------------IKTTNIGQCADVNFTL----NGDMVVVDD 200 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEE-TTTTE---EE-------------EECCCCSCEEEEEECT----TCCEEEEEC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEE-CCCCE---EE-------------EeecCCCCccEEEECC----CCCEEEEcC
Confidence 67899986 334899999878999886 33221 11 0111334578999997 677888643
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
.... ....|..+...+. ... ...+. ...+-
T Consensus 201 ~~~~--------------------------------~~~gv~~~~~~~~------------~~~-~~~~~-----~~~~P 230 (433)
T 4hw6_A 201 QSSD--------------------------------TNTGIYLFTRASG------------FTE-RLSLC-----NARGA 230 (433)
T ss_dssp CSCT--------------------------------TSEEEEEECGGGT------------TCC-EEEEE-----ECSSB
T ss_pred CCCc--------------------------------ccceEEEEECCCC------------eec-ccccc-----ccCCC
Confidence 1100 0123333332111 111 11221 11122
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|+++|.+|.|||+.- ..+.|+|+++++. .+. ..+
T Consensus 231 ~giavd~~~G~lyv~d~-----------------~~~~V~~~d~~~g----~~~-----------------------~~~ 266 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRY-----------------HHAMISSYDPATG----TLT-----------------------EEE 266 (433)
T ss_dssp CCCEECTTTCCEEECBT-----------------TCSEEEEECTTTC----CEE-----------------------EEE
T ss_pred CEEEEeCCCCeEEEEEC-----------------CCCEEEEEECCCC----eEE-----------------------EEE
Confidence 34889987899999742 1357999998731 000 011
Q ss_pred EEecc-ccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccc-cCCCCCCCCCCCCCCCCCCCCCCccceeee
Q 005419 452 WALGF-RNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVY-EGPFRYNPPSSPGGNTSASSINPIFPVMGY 529 (697)
Q Consensus 452 ~A~Gl-RNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~-eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y 529 (697)
+..|- ..+.+++||+... +||++|.+.+..-.++.=...+.++.+.. .|... .. + .. ++ ..-...+
T Consensus 267 ~~~~~~~~~~~ia~dpdG~-~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g-~~----g-~~--dg---~~~~a~~ 334 (433)
T 4hw6_A 267 VMMDTKGSNFHIVWHPTGD-WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHS-SP----G-WV--DG---MGTGARL 334 (433)
T ss_dssp EECSCCSSCEEEEECTTSS-EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTT-CC----C-CB--CE---EGGGSBC
T ss_pred eccCCCCCcccEEEeCCCC-EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCC-CC----c-cC--CC---cccceEE
Confidence 22221 2345699999854 69999988764333332111222222211 11000 00 0 00 00 0000011
Q ss_pred cCCccCCCCCCcccceeEe-----ecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCC-ccccc
Q 005419 530 NHSEVNKAEGSASITGGYF-----YRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSP-IQCDT 603 (697)
Q Consensus 530 ~H~~~~~~~Gs~S~tGg~v-----YrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p-~~c~~ 603 (697)
..|.|+.| |.++ .-.|.++++|..+++|+.+. + .|.. ..+. +... ....+
T Consensus 335 -----------~~P~giav~~n~~y~~d---d~~g~lyvaD~~n~~I~~~~--~--~G~v--~t~~----G~g~~~~~G~ 390 (433)
T 4hw6_A 335 -----------WGPNQGIFVKNEAYAGE---EDEYDFYFCDRDSHTVRVLT--P--EGRV--TTYA----GRGNSREWGY 390 (433)
T ss_dssp -----------SSEEEEEEEECGGGTTS---SCCEEEEEEETTTTEEEEEC--T--TSEE--EEEE----CCCTTCSSCC
T ss_pred -----------cCCccEEEEcccccccc---CCCCcEEEEECCCCEEEEEC--C--CCCE--EEEE----eCCCCCcccc
Confidence 34667777 4332 23578899999999998875 3 3532 2221 1110 01111
Q ss_pred ccc-cc-cCCCCceeeEEEc-CCCcEEEEecC--eEEEEec
Q 005419 604 VKG-SS-FPSLGFITSFGQD-NRKDIYLLASN--GVYRVVR 639 (697)
Q Consensus 604 ~~g-~~-~~~~grI~sf~ed-~dGeLYvlts~--gIYRIv~ 639 (697)
..| .. ...+.++.+++.| ++|.|||++.+ .|.||..
T Consensus 391 ~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 391 VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 122 11 1235689999999 89999999974 5888753
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.33 E-value=0.00045 Score=68.05 Aligned_cols=233 Identities=14% Similarity=0.207 Sum_probs=133.0
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|++.+|| ++||++. .|.|++++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 18 ~~i~~d~~g--~l~v~~~~~~~v~~~d-~~-~~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 75 (299)
T 2z2n_A 18 YGITVSDKG--KVWITQHKANMISCIN-LD-GK--ITEY-------PL-----PTPDAKVMCLTISS----DGEVWFTEN 75 (299)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-CC--EEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred cceEECCCC--CEEEEecCCCcEEEEc-CC-CC--eEEe-------cC-----CcccCceeeEEECC----CCCEEEeCC
Confidence 688889998 6999987 68898875 33 22 1110 00 01235678999996 688888632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
.. ..|.+|..++ +.+.+ .+|...+..
T Consensus 76 ~~------------------------------------~~i~~~~~~g---------------~~~~~---~~~~~~~~~ 101 (299)
T 2z2n_A 76 AA------------------------------------NKIGRITKKG---------------IIKEY---TLPNPDSAP 101 (299)
T ss_dssp TT------------------------------------TEEEEECTTS---------------CEEEE---ECSSTTCCE
T ss_pred CC------------------------------------CeEEEECCCC---------------cEEEE---eCCCcCCCc
Confidence 10 1455554221 12222 234333445
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|.+++ ||.||++... .++|.++|+++.. ..+.+|
T Consensus 102 ~~i~~~~-~g~l~v~~~~-----------------~~~i~~~d~~g~~-----------~~~~~~--------------- 137 (299)
T 2z2n_A 102 YGITEGP-NGDIWFTEMN-----------------GNRIGRITDDGKI-----------REYELP--------------- 137 (299)
T ss_dssp EEEEECT-TSCEEEEETT-----------------TTEEEEECTTCCE-----------EEEECS---------------
T ss_pred eeeEECC-CCCEEEEecC-----------------CceEEEECCCCCE-----------EEecCC---------------
Confidence 6799999 9999997632 2468888875520 011111
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCccceeeecC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNH 531 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y~H 531 (697)
....+|.++++|+. + +||+++.+.. .|.++...+.. .. +..+.
T Consensus 138 --~~~~~~~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~g~~-----------------------------~~-~~~~~ 180 (299)
T 2z2n_A 138 --NKGSYPSFITLGSD-N-ALWFTENQNN---AIGRITESGDI-----------------------------TE-FKIPT 180 (299)
T ss_dssp --STTCCEEEEEECTT-S-CEEEEETTTT---EEEEECTTCCE-----------------------------EE-EECSS
T ss_pred --CCCCCCceEEEcCC-C-CEEEEeCCCC---EEEEEcCCCcE-----------------------------EE-eeCCC
Confidence 12457889999987 4 5999886433 34433221000 00 00000
Q ss_pred CccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccccccCC
Q 005419 532 SEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPS 611 (697)
Q Consensus 532 ~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~~~ 611 (697)
+...+.++.+-. .|.+++++...+.|+.+. + .|.+.. +. ++ ..
T Consensus 181 -------~~~~~~~i~~~~-------~g~l~v~~~~~~~i~~~~--~--~g~~~~--~~--------~~---------~~ 223 (299)
T 2z2n_A 181 -------PASGPVGITKGN-------DDALWFVEIIGNKIGRIT--T--SGEITE--FK--------IP---------TP 223 (299)
T ss_dssp -------TTCCEEEEEECT-------TSSEEEEETTTTEEEEEC--T--TCCEEE--EE--------CS---------ST
T ss_pred -------CCCcceeEEECC-------CCCEEEEccCCceEEEEC--C--CCcEEE--EE--------CC---------CC
Confidence 112344444421 367788887778887764 2 344332 21 00 01
Q ss_pred CCceeeEEEcCCCcEEEEec--CeEEEEec
Q 005419 612 LGFITSFGQDNRKDIYLLAS--NGVYRVVR 639 (697)
Q Consensus 612 ~grI~sf~ed~dGeLYvlts--~gIYRIv~ 639 (697)
...+.++.+|++|.||+.+. ++|+++..
T Consensus 224 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 34688999999999999973 57988865
No 15
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.30 E-value=0.00068 Score=66.70 Aligned_cols=234 Identities=15% Similarity=0.143 Sum_probs=133.0
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|++.+|| ++||+.. .|.|++++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 60 ~~i~~~~~g--~l~v~~~~~~~i~~~~-~~-g~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 117 (299)
T 2z2n_A 60 MCLTISSDG--EVWFTENAANKIGRIT-KK-GI--IKEY-------TL-----PNPDSAPYGITEGP----NGDIWFTEM 117 (299)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SC--EEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred eeEEECCCC--CEEEeCCCCCeEEEEC-CC-Cc--EEEE-------eC-----CCcCCCceeeEECC----CCCEEEEec
Confidence 678888988 6999986 68898875 22 22 1000 01 01234678999997 688988632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
.. ..|.+|..++ +.+.+ ..+...+..
T Consensus 118 ~~------------------------------------~~i~~~d~~g---------------~~~~~---~~~~~~~~~ 143 (299)
T 2z2n_A 118 NG------------------------------------NRIGRITDDG---------------KIREY---ELPNKGSYP 143 (299)
T ss_dssp TT------------------------------------TEEEEECTTC---------------CEEEE---ECSSTTCCE
T ss_pred CC------------------------------------ceEEEECCCC---------------CEEEe---cCCCCCCCC
Confidence 10 2455554311 11111 123233445
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|.+++ ||.||++.-. .++|.|+|+++.. . .+.+
T Consensus 144 ~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~~-----~------~~~~---------------- 178 (299)
T 2z2n_A 144 SFITLGS-DNALWFTENQ-----------------NNAIGRITESGDI-----T------EFKI---------------- 178 (299)
T ss_dssp EEEEECT-TSCEEEEETT-----------------TTEEEEECTTCCE-----E------EEEC----------------
T ss_pred ceEEEcC-CCCEEEEeCC-----------------CCEEEEEcCCCcE-----E------EeeC----------------
Confidence 6799999 9999997521 2468888875410 0 0111
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCccceeeecC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYNH 531 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y~H 531 (697)
..++..|.++++|+. + +||+++.+.+ .|.++...+. +. .+..+
T Consensus 179 -~~~~~~~~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~g~--~~----------------------------~~~~~- 221 (299)
T 2z2n_A 179 -PTPASGPVGITKGND-D-ALWFVEIIGN---KIGRITTSGE--IT----------------------------EFKIP- 221 (299)
T ss_dssp -SSTTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC--EE----------------------------EEECS-
T ss_pred -CCCCCcceeEEECCC-C-CEEEEccCCc---eEEEECCCCc--EE----------------------------EEECC-
Confidence 123567889999987 4 5999987543 3444432100 00 00000
Q ss_pred CccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccccccCC
Q 005419 532 SEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFPS 611 (697)
Q Consensus 532 ~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~~~ 611 (697)
.+...+.+..+-. .|++++++...+.|+.+.. .|.+. .+. ++ + .
T Consensus 222 ------~~~~~~~~i~~~~-------~g~l~v~~~~~~~i~~~d~----~g~~~--~~~--------~~-----~----~ 265 (299)
T 2z2n_A 222 ------TPNARPHAITAGA-------GIDLWFTEWGANKIGRLTS----NNIIE--EYP--------IQ-----I----K 265 (299)
T ss_dssp ------STTCCEEEEEECS-------TTCEEEEETTTTEEEEEET----TTEEE--EEE--------CS-----S----S
T ss_pred ------CCCCCceeEEECC-------CCCEEEeccCCceEEEECC----CCceE--EEe--------CC-----C----C
Confidence 0113455554421 3678888887788887753 24322 221 11 0 1
Q ss_pred CCceeeEEEcCCCcEEEEe-cCeEEEEecCC
Q 005419 612 LGFITSFGQDNRKDIYLLA-SNGVYRVVRPS 641 (697)
Q Consensus 612 ~grI~sf~ed~dGeLYvlt-s~gIYRIv~ps 641 (697)
...+.++.+ ++|.||+.+ .++|+|+-+.+
T Consensus 266 ~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 266 SAEPHGICF-DGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp SCCEEEEEE-CSSCEEEEETTTEEEEEEEC-
T ss_pred CCccceEEe-cCCCEEEEecCCcEEEEEcCc
Confidence 246888999 999999998 46799987543
No 16
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.27 E-value=0.00064 Score=69.21 Aligned_cols=169 Identities=13% Similarity=0.104 Sum_probs=100.3
Q ss_pred CcEEEEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
+-.+|++++|.. -++++.|||. +||+++. .|+|++++ + +|. + .+.........+++++
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~-~l~~~d~~~~~i~~~~-~-~g~---~-------------~~~~~~~~~~~gl~~d 94 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQR-TLVWSDLVGRRVLGWR-E-DGT---V-------------DVLLDATAFTNGNAVD 94 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGT-EEEEEETTTTEEEEEE-T-TSC---E-------------EEEEESCSCEEEEEEC
T ss_pred CCceEEEecCCcCccCCeEeCCCC-EEEEEECCCCEEEEEe-C-CCC---E-------------EEEeCCCCccceeeEC
Confidence 345788998887 6789999984 5777774 68998875 3 232 1 1111223446789999
Q ss_pred CCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceE
Q 005419 278 PNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVR 357 (697)
Q Consensus 278 PdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r 357 (697)
| +|++|+.-.. ..+|.+|..++ +.+
T Consensus 95 ~----dG~l~v~~~~------------------------------------~~~v~~~~~~g---------------~~~ 119 (305)
T 3dr2_A 95 A----QQRLVHCEHG------------------------------------RRAITRSDADG---------------QAH 119 (305)
T ss_dssp T----TSCEEEEETT------------------------------------TTEEEEECTTS---------------CEE
T ss_pred C----CCCEEEEECC------------------------------------CCEEEEECCCC---------------CEE
Confidence 7 6888885321 02566664321 122
Q ss_pred EEEeeccCC-CCccceeeEeCCCCCeEEEEe---cCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCc
Q 005419 358 RILTMGLHF-TSHHGGQILFGPEDGHLYFMV---GDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNY 433 (697)
Q Consensus 358 ~Il~~~~P~-~~H~GG~L~FGP~DG~LYis~---GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 433 (697)
.+.. .... ....-..|+++| ||.||++- |.... ............+.|+|+|+++.
T Consensus 120 ~~~~-~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~---~~~~~~~~~~~~~~v~~~d~~~g--------------- 179 (305)
T 3dr2_A 120 LLVG-RYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKP---SQGCPADPELAHHSVYRLPPDGS--------------- 179 (305)
T ss_dssp EEEC-EETTEECSCCCCEEECT-TSCEEEECCSGGGSCG---GGSCCCCCSSSCEEEEEECSSSC---------------
T ss_pred EEEe-ccCCCccCCCCCEEECC-CCCEEEeCcCCCcccc---ccccccccccCCCeEEEEcCCCC---------------
Confidence 2221 1111 112234699999 99999963 22100 00001112233578999998541
Q ss_pred cCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCC
Q 005419 434 SIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQ 479 (697)
Q Consensus 434 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~ 479 (697)
..+.++ ++..|.+++|+|.. ..||++|...
T Consensus 180 --------------~~~~~~-~~~~p~gl~~spdg-~~lyv~~~~~ 209 (305)
T 3dr2_A 180 --------------PLQRMA-DLDHPNGLAFSPDE-QTLYVSQTPE 209 (305)
T ss_dssp --------------CCEEEE-EESSEEEEEECTTS-SEEEEEECCC
T ss_pred --------------cEEEEe-cCCCCcceEEcCCC-CEEEEEecCC
Confidence 123455 88999999999975 4699998753
No 17
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.25 E-value=0.0004 Score=68.00 Aligned_cols=231 Identities=15% Similarity=0.159 Sum_probs=127.7
Q ss_pred eeEEECCCCCceEEE-Ee-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFL-SN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV-~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|++.+|| ++|| ++ ..|.|++++ ++ .+. .. . ..........+||++| +|.+||.-
T Consensus 27 ~~i~~~~~g--~l~v~~~~~~~~i~~~~-~~--~~~-~~------~------~~~~~~~~p~~i~~~~----~g~l~v~~ 84 (270)
T 1rwi_B 27 SGVAVDSAG--NVYVTSEGMYGRVVKLA-TG--STG-TT------V------LPFNGLYQPQGLAVDG----AGTVYVTD 84 (270)
T ss_dssp EEEEECTTC--CEEEEECSSSCEEEEEC-C--------E------E------CCCCSCCSCCCEEECT----TCCEEEEE
T ss_pred cceEECCCC--CEEEEccCCCCcEEEec-CC--Ccc-cc------e------EeeCCcCCcceeEECC----CCCEEEEc
Confidence 678999998 6999 85 468898875 22 111 10 0 0011224578899997 57898864
Q ss_pred eecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCcc
Q 005419 291 NCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHH 370 (697)
Q Consensus 291 s~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~ 370 (697)
. + .+|.+|..++. ..+. + .. .....
T Consensus 85 ~-~------------------------------------~~i~~~d~~~~--------------~~~~-~--~~-~~~~~ 109 (270)
T 1rwi_B 85 F-N------------------------------------NRVVTLAAGSN--------------NQTV-L--PF-DGLNY 109 (270)
T ss_dssp T-T------------------------------------TEEEEECTTCS--------------CCEE-C--CC-CSCSS
T ss_pred C-C------------------------------------CEEEEEeCCCc--------------eEee-e--ec-CCcCC
Confidence 3 1 14555643221 1111 1 10 11123
Q ss_pred ceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCe
Q 005419 371 GGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPE 450 (697)
Q Consensus 371 GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pE 450 (697)
-..|.|++ ||.|||+... .|+|.+++..+. . ...
T Consensus 110 p~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~~~---------------~-------------~~~ 143 (270)
T 1rwi_B 110 PEGLAVDT-QGAVYVADRG-----------------NNRVVKLAAGSK---------------T-------------QTV 143 (270)
T ss_dssp EEEEEECT-TCCEEEEEGG-----------------GTEEEEECTTCC---------------S-------------CEE
T ss_pred CcceEECC-CCCEEEEECC-----------------CCEEEEEECCCc---------------e-------------eEe
Confidence 45799999 9999997532 356888864331 0 000
Q ss_pred EEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCccceeeec
Q 005419 451 IWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRVYEGPFRYNPPSSPGGNTSASSINPIFPVMGYN 530 (697)
Q Consensus 451 I~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~~eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y~ 530 (697)
....++.+|.++++|+. + +||++|.+.+ .|.++...+..-+ .....
T Consensus 144 ~~~~~~~~p~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~~~~~~-----------------------------~~~~~ 189 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNS-G-NVYVTDTDNN---RVVKLEAESNNQV-----------------------------VLPFT 189 (270)
T ss_dssp CCCCSCCSCCCEEECTT-C-CEEEEEGGGT---EEEEECTTTCCEE-----------------------------ECCCS
T ss_pred eccccCCCceeEEEeCC-C-CEEEEECCCC---EEEEEecCCCceE-----------------------------eeccc
Confidence 01235678999999996 4 5999997643 3444432211100 00000
Q ss_pred CCccCCCCCCcccceeEeecCCCCcccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccccccC
Q 005419 531 HSEVNKAEGSASITGGYFYRSQTDPCMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKGSSFP 610 (697)
Q Consensus 531 H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g~~~~ 610 (697)
+...+.|..+-. .|.+++++...++|+.+.. + |..... + . ..
T Consensus 190 --------~~~~p~~i~~d~-------~g~l~v~~~~~~~v~~~~~--~--~~~~~~-~----------~--------~~ 231 (270)
T 1rwi_B 190 --------DITAPWGIAVDE-------AGTVYVTEHNTNQVVKLLA--G--STTSTV-L----------P--------FT 231 (270)
T ss_dssp --------SCCSEEEEEECT-------TCCEEEEETTTSCEEEECT--T--CSCCEE-C----------C--------CC
T ss_pred --------CCCCceEEEECC-------CCCEEEEECCCCcEEEEcC--C--CCccee-e----------c--------cC
Confidence 002344544421 3677888887788877642 2 221110 0 0 01
Q ss_pred CCCceeeEEEcCCCcEEEEec--CeEEEEe
Q 005419 611 SLGFITSFGQDNRKDIYLLAS--NGVYRVV 638 (697)
Q Consensus 611 ~~grI~sf~ed~dGeLYvlts--~gIYRIv 638 (697)
....+.++++|++|.||+++. +.|+++.
T Consensus 232 ~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp SCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred CCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 134688999999999999986 3466554
No 18
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.20 E-value=7.2e-05 Score=79.18 Aligned_cols=169 Identities=15% Similarity=0.112 Sum_probs=108.0
Q ss_pred CCCcEEEEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeE
Q 005419 199 PSGLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIA 275 (697)
Q Consensus 199 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiA 275 (697)
+.|-..+.+..++. .+|++.+++ ++||+++. .++|+.++. + |+. . ..+...+....-|||
T Consensus 60 ~~g~~~~~~~~~~~~~~~l~~d~~~-~~ly~~D~~~~~I~r~~~-~-g~~--~------------~~~~~~~~~~p~gla 122 (349)
T 3v64_C 60 PHRSEYTLLLNNLENAIALDFHHRR-ELVFWSDVTLDRILRANL-N-GSN--V------------EEVVSTGLESPGGLA 122 (349)
T ss_dssp TTSCCEEEEECSCSCEEEEEEETTT-TEEEEEETTTTEEEEEET-T-SCS--C------------EEEECSSCSCCCEEE
T ss_pred CCCCeeEEeecCCCceEEEEEeccc-cEEEEEeccCCceEEEec-C-CCC--c------------eEEEeCCCCCccEEE
Confidence 34555677777776 789998755 38999996 688998863 3 321 1 012222334568999
Q ss_pred eCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCc
Q 005419 276 FHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLE 355 (697)
Q Consensus 276 fhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~ 355 (697)
+|| .+|.+|+.-.. ..+|.++..++. .
T Consensus 123 vd~---~~g~ly~~d~~------------------------------------~~~I~~~~~dG~--------------~ 149 (349)
T 3v64_C 123 VDW---VHDKLYWTDSG------------------------------------TSRIEVANLDGA--------------H 149 (349)
T ss_dssp EET---TTTEEEEEETT------------------------------------TTEEEEEETTSC--------------S
T ss_pred Eec---CCCeEEEEcCC------------------------------------CCeEEEEcCCCC--------------c
Confidence 996 47889886431 126666665432 1
Q ss_pred eEEEEeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccC
Q 005419 356 VRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSI 435 (697)
Q Consensus 356 ~r~Il~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsI 435 (697)
.++++.. ....--.|+++|.+|+||++--. ..++|.|++.||..
T Consensus 150 ~~~l~~~----~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~---------------- 193 (349)
T 3v64_C 150 RKVLLWQ----SLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSG---------------- 193 (349)
T ss_dssp CEEEECT----TCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCS----------------
T ss_pred eEEEEeC----CCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCC----------------
Confidence 2333321 12334569999877999998421 04789999999830
Q ss_pred CCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 436 PADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 436 P~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
+..+...++..|.+++||+..+ +||++|.+.+..+.++
T Consensus 194 ------------~~~~~~~~~~~PnGla~d~~~~-~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 194 ------------RRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERAN 231 (349)
T ss_dssp ------------CEESCCSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ------------cEEEEECCCCCcceEEEeCCCC-EEEEEECCCCEEEEEe
Confidence 1122345788999999998765 7999998876444444
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.16 E-value=4.6e-05 Score=81.84 Aligned_cols=164 Identities=15% Similarity=0.090 Sum_probs=104.7
Q ss_pred CcEEEEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
+-.++.++.++. .+|++.+++ ++||+++. .++|+.++. + |+. + ..+...+.....|||++
T Consensus 105 ~~~~~~~~~~~~~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~-~-g~~--~------------~~~~~~~~~~p~glavd 167 (386)
T 3v65_B 105 RSEYTLLLNNLENAIALDFHHRR-ELVFWSDVTLDRILRANL-N-GSN--V------------EEVVSTGLESPGGLAVD 167 (386)
T ss_dssp SCCCEEEECSCSCEEEEEEETTT-TEEEEEETTTTEEEEEET-T-SCC--E------------EEEECSSCSCCCCEEEE
T ss_pred CCcEEEEecCCCccEEEEEecCC-CeEEEEeCCCCcEEEEec-C-CCC--c------------EEEEeCCCCCccEEEEE
Confidence 334566777776 789998755 38999996 688998863 3 321 1 01122233456889999
Q ss_pred CCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceE
Q 005419 278 PNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVR 357 (697)
Q Consensus 278 PdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r 357 (697)
| .+|.+|+.-... .+|.++..++. ..+
T Consensus 168 ~---~~g~lY~~d~~~------------------------------------~~I~~~~~dg~--------------~~~ 194 (386)
T 3v65_B 168 W---VHDKLYWTDSGT------------------------------------SRIEVANLDGA--------------HRK 194 (386)
T ss_dssp T---TTTEEEEEETTT------------------------------------TEEEECBTTSC--------------SCE
T ss_pred e---CCCeEEEEcCCC------------------------------------CeEEEEeCCCC--------------ceE
Confidence 7 478898864311 25655544322 223
Q ss_pred EEEeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCC
Q 005419 358 RILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPA 437 (697)
Q Consensus 358 ~Il~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~ 437 (697)
+++.. ....--.|+++|.+|+|||+--. ..++|.|++.||.
T Consensus 195 ~l~~~----~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~------------------- 235 (386)
T 3v65_B 195 VLLWQ----SLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGS------------------- 235 (386)
T ss_dssp EEECS----SCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSC-------------------
T ss_pred EeecC----CCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCC-------------------
Confidence 33321 12334569999867999998311 1478999999983
Q ss_pred CCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCce
Q 005419 438 DNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYE 483 (697)
Q Consensus 438 DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~E 483 (697)
.+..+...|+..|.+++||+..+ +||++|.+.+..+
T Consensus 236 ---------~~~~~~~~~~~~PnGlavd~~~~-~lY~aD~~~~~I~ 271 (386)
T 3v65_B 236 ---------GRRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIE 271 (386)
T ss_dssp ---------SCEEEECSSCSCEEEEEEEGGGT-EEEEEETTTTEEE
T ss_pred ---------CcEEEEECCCCCeeeEEEeCCCC-EEEEEECCCCEEE
Confidence 02244567899999999998765 7999998775433
No 20
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.001 Score=72.66 Aligned_cols=279 Identities=11% Similarity=0.098 Sum_probs=141.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCC-eEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNG-RFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG-~~YvsYs 291 (697)
..|++.|+..++|||+++.++|+++++ +.+ .+. ..........+|||+| +| ++||.-.
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~-~~~---~v~-------------~~~~~~~~P~~ia~d~----~G~~lyvad~ 198 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDF-EKE---YVS-------------TVYSGLSKVRTICWTH----EADSMIITND 198 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEET-TTT---EEE-------------EEECCCSCEEEEEECT----TSSEEEEEEC
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEEC-CCC---EEE-------------EEecCCCCcceEEEeC----CCCEEEEEeC
Confidence 678888831237999998888988863 211 111 0112345688999997 45 4888654
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
... ....+|..+..++. ....+.+-. .++-
T Consensus 199 ~~~--------------------------------~~~~~v~~~~~~g~------------~~~~~~l~~------~~~p 228 (430)
T 3tc9_A 199 QNN--------------------------------NDRPNNYILTRESG------------FKVITELTK------GQNC 228 (430)
T ss_dssp CSC--------------------------------TTSEEEEEEEGGGT------------SCSEEEEEE------CSSC
T ss_pred CCC--------------------------------cccceEEEEeCCCc------------eeeeeeecc------CCCc
Confidence 211 01134444443221 111122221 2234
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|+++|.+|+|||+--. .++|+|+++++.. ..++
T Consensus 229 ~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~----------------------------~~~~ 263 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQE----------------------------TTPL 263 (430)
T ss_dssp CCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTE----------------------------EEEE
T ss_pred eEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCc----------------------------EEEE
Confidence 568899977999997521 3579999998620 0122
Q ss_pred EEec-cccceeeeecCCCCCeEEEEEcCCCCceeeEEeccCCCCCccc-ccCCCCCCCCCCCCCCCCCCCCCCccceeee
Q 005419 452 WALG-FRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKGGNYGWRV-YEGPFRYNPPSSPGGNTSASSINPIFPVMGY 529 (697)
Q Consensus 452 ~A~G-lRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG~NYGWP~-~eG~~~~~p~~~p~g~~~~~~~~~~~Pi~~y 529 (697)
+..+ ...|.+++||+.. .+||++|.+.+....++.=...+.++.+. ..|.. .. .+.. ++ ......+
T Consensus 264 ~~~~~~~~P~gia~~pdG-~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~--g~----~g~~--dg---~~~~a~~ 331 (430)
T 3tc9_A 264 FTIQDSGWEFHIQFHPSG-NYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ--GA----KDWV--DG---VGKKARM 331 (430)
T ss_dssp EECSSSSCCEEEEECTTS-SEEEEEETTTTEEEEEEEETTTTEECCCEEEEECT--TC----BCCB--CE---EGGGCBB
T ss_pred EEcCCCCcceeEEEcCCC-CEEEEEECCCCEEEEEeCCcccccccceEEEeccC--CC----CCCC--CC---CCcceEe
Confidence 3332 2458899999985 36999998776433322111101111111 00000 00 0000 00 0000011
Q ss_pred cCCccCCCCCCcccceeEeecCCCC-c-ccCCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCCCcccccccc-
Q 005419 530 NHSEVNKAEGSASITGGYFYRSQTD-P-CMYGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDSPIQCDTVKG- 606 (697)
Q Consensus 530 ~H~~~~~~~Gs~S~tGg~vYrG~~f-P-~l~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~p~~c~~~~g- 606 (697)
..|.+|.+....++ . .-.|.++++|..+.+|..+. + .|... .+. -.+..... .+..|
T Consensus 332 -----------~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~--~--~G~v~--~~~--g~g~~~~~-G~~dG~ 391 (430)
T 3tc9_A 332 -----------HAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT--P--QGRVT--TFA--GRGSNGTS-GYNDGD 391 (430)
T ss_dssp -----------SSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC--T--TSEEE--EEE--ECCTTSSS-SCBCEE
T ss_pred -----------CCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC--C--CCcEE--EEE--eCCCCCCC-cccCCC
Confidence 24442333211100 0 12478999999999988765 3 35332 221 11100000 11112
Q ss_pred cc-cCCCCceeeEEEcC-CCcEEEEecC--eEEEEec
Q 005419 607 SS-FPSLGFITSFGQDN-RKDIYLLASN--GVYRVVR 639 (697)
Q Consensus 607 ~~-~~~~grI~sf~ed~-dGeLYvlts~--gIYRIv~ 639 (697)
.. ...+.++.+|+.|+ +|.|||++.+ .|.||..
T Consensus 392 ~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 392 LRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred chhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 11 12256899999999 6999999974 5888753
No 21
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.08 E-value=0.00013 Score=78.80 Aligned_cols=167 Identities=11% Similarity=0.115 Sum_probs=104.3
Q ss_pred EEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCC
Q 005419 205 EKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQ 281 (697)
Q Consensus 205 e~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~ 281 (697)
+.+..++. ++|++.+.+ ++||+++. .++|+.+.+ + +.... ... ..+...+....-|||+|+
T Consensus 105 ~~~~~~~~~~~~l~~d~~~-~~lywsD~~~~~I~~~~~-~-g~~~~---------~~~-~~~~~~~~~~p~glavD~--- 168 (400)
T 3p5b_L 105 TSLIPNLRNVVALDTEVAS-NRIYWSDLSQRMICSTQL-D-RAHGV---------SSY-DTVISRDIQAPDGLAVDW--- 168 (400)
T ss_dssp EEEECSCSCEEEEEEETTT-TEEEEEETTTTEEEEEEC-----------------CCC-EEEECSSCSCEEEEEEET---
T ss_pred eEeccccCcceEEeeeecc-CceEEEecCCCeEEEEEc-c-cCCCC---------Ccc-eEEEeCCCCCcccEEEEe---
Confidence 44555665 899999865 38999996 688988763 2 21100 000 112223445678999996
Q ss_pred cCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEe
Q 005419 282 QNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILT 361 (697)
Q Consensus 282 ~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~ 361 (697)
.++.||+.-+.. .+|.++..++. ..++++.
T Consensus 169 ~~~~lY~~d~~~------------------------------------~~I~~~~~~g~--------------~~~~l~~ 198 (400)
T 3p5b_L 169 IHSNIYWTDSVL------------------------------------GTVSVADTKGV--------------KRKTLFR 198 (400)
T ss_dssp TTTEEEEEETTT------------------------------------TEEEEECTTTC--------------SEEEEEE
T ss_pred cCCceEEEECCC------------------------------------CeEEEEeCCCC--------------ceEEEEe
Confidence 478898864311 25555544332 2333443
Q ss_pred eccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCC
Q 005419 362 MGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPY 441 (697)
Q Consensus 362 ~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF 441 (697)
. ....--.|+++|.+|+|||+-- + ..++|.|++.||..
T Consensus 199 ~----~~~~P~~iavdp~~g~ly~td~--~--------------~~~~I~~~~~dG~~---------------------- 236 (400)
T 3p5b_L 199 E----NGSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGVD---------------------- 236 (400)
T ss_dssp C----SSCCEEEEEEETTTTEEEEEEC--S--------------SSCCEEEEETTSCS----------------------
T ss_pred C----CCCCcceEEEecccCeEEEEeC--C--------------CCCEEEEEeCCCCc----------------------
Confidence 1 1223456999987799999851 1 02579999999830
Q ss_pred CCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 442 SEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 442 ~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
+..+..-++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 237 ------~~~~~~~~l~~P~glavd~~~~-~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 237 ------IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 274 (400)
T ss_dssp ------CEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ------cEEEEECCCCceEEEEEEeCCC-EEEEEECCCCEEEEEe
Confidence 1234456889999999998876 7999999876555554
No 22
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.04 E-value=0.00017 Score=75.69 Aligned_cols=164 Identities=15% Similarity=0.075 Sum_probs=103.2
Q ss_pred EEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCC
Q 005419 205 EKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQ 281 (697)
Q Consensus 205 e~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~ 281 (697)
+.+..++. ++|++.+.+ ++||+++. .++|+.+.. + |+... ..+...+-...-|||+++
T Consensus 28 ~~~~~~~~~~~~ld~d~~~-~~lyw~D~~~~~I~r~~~-~-g~~~~-------------~~~~~~~l~~p~glavd~--- 88 (318)
T 3sov_A 28 TIVVGGLEDAAAVDFVFSH-GLIYWSDVSEEAIKRTEF-N-KTESV-------------QNVVVSGLLSPDGLACDW--- 88 (318)
T ss_dssp EEEEEEEEEEEEEEEEGGG-TEEEEEETTTTEEEEEET-T-SSSCC-------------CEEEEECCSCCCEEEEET---
T ss_pred EEEecCCCccEEEEEEeCC-CEEEEEECCCCcEEEEEc-c-CCCce-------------EEEEcCCCCCccEEEEEc---
Confidence 44555665 789998854 38999996 578988763 3 32100 012223335678999996
Q ss_pred cCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEe
Q 005419 282 QNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILT 361 (697)
Q Consensus 282 ~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~ 361 (697)
.+|.+|+.-.. ..+|.++..++. ..++++.
T Consensus 89 ~~g~ly~~d~~------------------------------------~~~I~~~~~dG~--------------~~~~l~~ 118 (318)
T 3sov_A 89 LGEKLYWTDSE------------------------------------TNRIEVSNLDGS--------------LRKVLFW 118 (318)
T ss_dssp TTTEEEEEETT------------------------------------TTEEEEEETTSC--------------SCEEEEC
T ss_pred CCCeEEEEECC------------------------------------CCEEEEEECCCC--------------cEEEEEe
Confidence 57899886421 126666665432 2233332
Q ss_pred eccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCC
Q 005419 362 MGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPY 441 (697)
Q Consensus 362 ~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF 441 (697)
. ....-..|+++|..|+||++-- + ..++|.|++.||..
T Consensus 119 ~----~~~~P~giavdp~~g~ly~td~--~--------------~~~~I~r~~~dG~~---------------------- 156 (318)
T 3sov_A 119 Q----ELDQPRAIALDPSSGFMYWTDW--G--------------EVPKIERAGMDGSS---------------------- 156 (318)
T ss_dssp S----SCSSEEEEEEEGGGTEEEEEEC--S--------------SSCEEEEEETTSCS----------------------
T ss_pred C----CCCCccEEEEeCCCCEEEEEec--C--------------CCCEEEEEEcCCCC----------------------
Confidence 1 1123346999985699999741 0 13679999999830
Q ss_pred CCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 442 SEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 442 ~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
+..+..-++..|.+++||+..+ +||++|.+.+..+.++
T Consensus 157 ------~~~~~~~~l~~Pnglavd~~~~-~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 157 ------RFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSN 194 (318)
T ss_dssp ------CEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ------eEEEEECCCCCccEEEEeccCC-EEEEEECCCCEEEEEc
Confidence 1234456789999999999765 7999998766444443
No 23
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.01 E-value=0.00015 Score=85.81 Aligned_cols=167 Identities=11% Similarity=0.121 Sum_probs=104.5
Q ss_pred EEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCC
Q 005419 205 EKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQ 281 (697)
Q Consensus 205 e~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~ 281 (697)
+.++.++. ++|++.+.+ ++||+++. .++|+.+.+ + +.... . .. ..+...+.....|||+|+
T Consensus 417 ~~l~~~~~~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l-~-g~~~~-----~----~~-~~vi~~~l~~P~GLAvD~--- 480 (791)
T 3m0c_C 417 TSLIPNLRNVVALDTEVAS-NRIYWSDLSQRMICSTQL-D-RAHGV-----S----SY-DTVISRDIQAPDGLAVDW--- 480 (791)
T ss_dssp EEEECSCSSEEEEEEETTT-TEEEEEETTTTEEEEEEC-------------------C-EEEECSSCSCCCEEEEET---
T ss_pred eeeecCCCceEEEeecccC-CeeEEeeccceeEEEEec-c-CCCCC-----c----ce-eEEEecCCCCcceeeeee---
Confidence 44555665 788888754 38999997 588988764 2 21100 0 00 112222445678999997
Q ss_pred cCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEe
Q 005419 282 QNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILT 361 (697)
Q Consensus 282 ~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~ 361 (697)
..+.||++-+. ..+|.++..++. ..++|+.
T Consensus 481 ~~~~LY~tD~~------------------------------------~~~I~v~~ldG~--------------~~~~l~~ 510 (791)
T 3m0c_C 481 IHSNIYWTDSV------------------------------------LGTVSVADTKGV--------------KRKTLFR 510 (791)
T ss_dssp TTTEEEEEETT------------------------------------TTEEEEEETTSS--------------SEEEEEE
T ss_pred cCCcEEEEecC------------------------------------CCeEEEEeCCCC--------------eEEEEEe
Confidence 46789886431 126666665443 2344443
Q ss_pred eccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCC
Q 005419 362 MGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPY 441 (697)
Q Consensus 362 ~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF 441 (697)
.. ...--.|+++|..|+|||+-- + ..++|.|++.||.
T Consensus 511 ~~----l~~P~gIaVDp~~g~LYwtD~--g--------------~~~~I~~~~~dG~----------------------- 547 (791)
T 3m0c_C 511 EN----GSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGV----------------------- 547 (791)
T ss_dssp CT----TCCEEEEEEETTTTEEEEEEC--S--------------SSCEEEEEETTSC-----------------------
T ss_pred CC----CCCcceEEEecCCCCEEEecC--C--------------CCCeEEEEecCCC-----------------------
Confidence 11 223457999995699999851 1 0267999999983
Q ss_pred CCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 442 SEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 442 ~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
.+..+..-++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 548 -----~~~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 548 -----DIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 586 (791)
T ss_dssp -----CEEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred -----ceEEEEeCCCCCceEEEEecCCC-eEEEEeCCCCcEEEEe
Confidence 02245566889999999998876 7999998776544444
No 24
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.98 E-value=0.00039 Score=72.23 Aligned_cols=163 Identities=10% Similarity=0.118 Sum_probs=99.7
Q ss_pred EecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCC--CCcccccCCCCccCcccceeeccCCceeeeEeCCCCC
Q 005419 207 VGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGS--GSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQ 281 (697)
Q Consensus 207 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gs--g~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~ 281 (697)
+..++. .+|++.+++. +||+++. .++|+.+++ + +. +... + .+...+.....|||+++
T Consensus 25 ~~~~~~~p~g~~~d~~~~-~ly~~D~~~~~I~~~~~-~-g~~~~~~~-----~-------~~~~~~~~~p~glavd~--- 86 (316)
T 1ijq_A 25 LIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQL-D-RAHGVSSY-----D-------TVISRDIQAPDGLAVDW--- 86 (316)
T ss_dssp EECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEEC----------C-----E-------EEECSSCSCCCEEEEET---
T ss_pred hhcCCCceEEEEEEeCCC-EEEEEECCCCcEEEEEC-C-CCCCCccc-----E-------EEEeCCCCCcCEEEEee---
Confidence 444444 7899988653 8999997 589998863 2 21 0000 0 11112224568999986
Q ss_pred cCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEe
Q 005419 282 QNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILT 361 (697)
Q Consensus 282 ~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~ 361 (697)
.++.+|+.-.. ..+|.++..++. ..++++.
T Consensus 87 ~~~~ly~~d~~------------------------------------~~~I~~~~~~g~--------------~~~~~~~ 116 (316)
T 1ijq_A 87 IHSNIYWTDSV------------------------------------LGTVSVADTKGV--------------KRKTLFR 116 (316)
T ss_dssp TTTEEEEEETT------------------------------------TTEEEEEETTSS--------------SEEEEEE
T ss_pred cCCeEEEEECC------------------------------------CCEEEEEeCCCC--------------ceEEEEE
Confidence 37889886431 125666654332 2334443
Q ss_pred eccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCC
Q 005419 362 MGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPY 441 (697)
Q Consensus 362 ~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF 441 (697)
.. ...-..|+++|.+|+|||+-- + ..++|.|++.||..
T Consensus 117 ~~----~~~P~~iavdp~~g~ly~~d~--~--------------~~~~I~~~~~dG~~---------------------- 154 (316)
T 1ijq_A 117 EN----GSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGVD---------------------- 154 (316)
T ss_dssp CT----TCCEEEEEEETTTTEEEEEEC--S--------------SSCEEEEEETTSCC----------------------
T ss_pred CC----CCCcceEEeCCCCCEEEEEcc--C--------------CCCeEEEEcCCCCC----------------------
Confidence 11 223457999986899999741 1 03789999999830
Q ss_pred CCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 442 SEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 442 ~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
+..+...++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 155 ------~~~~~~~~~~~P~gla~d~~~~-~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 155 ------IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 192 (316)
T ss_dssp ------EEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ------eEEEEECCCCCceEEEEeccCC-EEEEEECCCCeEEEEe
Confidence 1123334788999999998765 7999998876444444
No 25
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.98 E-value=0.00023 Score=81.81 Aligned_cols=149 Identities=13% Similarity=0.063 Sum_probs=99.1
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
.+|++.+++ ++||+++. .++|+.+.+ + |+... .+...+.....|||+|+ .++.+|+.-.
T Consensus 40 ~~l~~d~~~-~~lywtD~~~~~I~r~~~-~-g~~~~--------------~v~~~g~~~P~GlAvD~---~~~~LY~tD~ 99 (628)
T 4a0p_A 40 SALDFDVTD-NRIYWTDISLKTISRAFM-N-GSALE--------------HVVEFGLDYPEGMAVDW---LGKNLYWADT 99 (628)
T ss_dssp EEEEEETTT-TEEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSCCCEEEEET---TTTEEEEEET
T ss_pred EEEEEECCC-CEEEEEECCCCeEEEEEC-C-CCCcE--------------EEEeCCCCCcceEEEEe---CCCEEEEEEC
Confidence 788999865 38999996 689998863 2 33110 11122234568999996 4788988532
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
. ..+|.++..++. ..++++... ...-
T Consensus 100 ~------------------------------------~~~I~v~~~dG~--------------~~~~l~~~~----l~~P 125 (628)
T 4a0p_A 100 G------------------------------------TNRIEVSKLDGQ--------------HRQVLVWKD----LDSP 125 (628)
T ss_dssp T------------------------------------TTEEEEEETTST--------------TCEEEECSS----CCCE
T ss_pred C------------------------------------CCEEEEEecCCC--------------cEEEEEeCC----CCCc
Confidence 1 136766666543 223343211 1234
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
-.|+++|.+|+|||+-- + -.++|.|++.||. ..++
T Consensus 126 ~~iavdp~~G~lY~tD~--g--------------~~~~I~r~~~dG~-----------------------------~~~~ 160 (628)
T 4a0p_A 126 RALALDPAEGFMYWTEW--G--------------GKPKIDRAAMDGS-----------------------------ERTT 160 (628)
T ss_dssp EEEEEETTTTEEEEEEC--S--------------SSCEEEEEETTSC-----------------------------SCEE
T ss_pred ccEEEccCCCeEEEeCC--C--------------CCCEEEEEeCCCC-----------------------------ceEE
Confidence 57999987899999841 1 0468999999983 1355
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCCC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQDE 481 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~ 481 (697)
..-++..|.++++|+..+ +||++|.+.+.
T Consensus 161 l~~~~~~P~GlalD~~~~-~LY~aD~~~~~ 189 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKR-RLYWTDLDTNL 189 (628)
T ss_dssp EECSCSSEEEEEEETTTT-EEEEEETTTTE
T ss_pred EECCCCCcceEEEccccC-EEEEEECCCCE
Confidence 566899999999999865 79999987664
No 26
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.92 E-value=0.0006 Score=67.90 Aligned_cols=151 Identities=17% Similarity=0.124 Sum_probs=95.8
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..+++.+++. +||+++. .++|++++. + +. .++ .+...+..+..+||+||+ ++++|+.-.
T Consensus 39 ~gi~~d~~~~-~ly~~d~~~~~I~~~~~-~-g~--~~~------------~~~~~~~~~p~~ia~d~~---~~~lyv~d~ 98 (267)
T 1npe_A 39 IGLAFDCVDK-VVYWTDISEPSIGRASL-H-GG--EPT------------TIIRQDLGSPEGIALDHL---GRTIFWTDS 98 (267)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEES-S-SC--CCE------------EEECTTCCCEEEEEEETT---TTEEEEEET
T ss_pred EEEEEecCCC-EEEEEECCCCEEEEEec-C-CC--CcE------------EEEECCCCCccEEEEEec---CCeEEEEEC
Confidence 6888888763 7999996 689998863 2 32 110 111122346789999973 688998642
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
. ..+|.++..++. ..+.++.. ....-
T Consensus 99 ~------------------------------------~~~I~~~~~~g~--------------~~~~~~~~----~~~~P 124 (267)
T 1npe_A 99 Q------------------------------------LDRIEVAKMDGT--------------QRRVLFDT----GLVNP 124 (267)
T ss_dssp T------------------------------------TTEEEEEETTSC--------------SCEEEECS----SCSSE
T ss_pred C------------------------------------CCEEEEEEcCCC--------------CEEEEEEC----CCCCc
Confidence 1 126666765432 12333321 11234
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|+|+|.+|+|||+-.. ...++|.|++.|+.. ...+
T Consensus 125 ~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~dg~~----------------------------~~~~ 161 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWN---------------RDNPKIETSHMDGTN----------------------------RRIL 161 (267)
T ss_dssp EEEEEETTTTEEEEEECC---------------SSSCEEEEEETTSCC----------------------------CEEE
T ss_pred cEEEEeeCCCEEEEEECC---------------CCCcEEEEEecCCCC----------------------------cEEE
Confidence 579999955899997521 014689999998720 1122
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCCC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQDE 481 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~ 481 (697)
...++..|.++++|+..+ +||++|.+.+.
T Consensus 162 ~~~~~~~P~gia~d~~~~-~lyv~d~~~~~ 190 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSS-QLCWVDAGTHR 190 (267)
T ss_dssp ECTTCSCEEEEEEETTTT-EEEEEETTTTE
T ss_pred EECCCCCCcEEEEcCCCC-EEEEEECCCCE
Confidence 335788999999999754 79999998753
No 27
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.84 E-value=0.00042 Score=79.53 Aligned_cols=159 Identities=15% Similarity=0.083 Sum_probs=101.1
Q ss_pred EecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcC
Q 005419 207 VGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQN 283 (697)
Q Consensus 207 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~N 283 (697)
+..++. ++|++.+++ ++||+++. .++|+.+.+ + |+... ..+...+....-|||+|+ .+
T Consensus 35 ~~~~~~~~~~ld~~~~~-~~ly~sD~~~~~I~r~~~-~-g~~~~-------------~~v~~~~~~~P~GlAvD~---~~ 95 (619)
T 3s94_A 35 VVGGLEDAAAVDFVFSH-GLIYWSDVSEEAIKRTEF-N-KTESV-------------QNVVVSGLLSPDGLACDW---LG 95 (619)
T ss_dssp -CBCCSCEEEEEEETTT-TEEEEEETTTTEEEEEEC-------C-------------EEEECSSCSCEEEEEEET---TT
T ss_pred EEcCCCceEEEEEEeCC-CEEEEEECCCCeEEEEEc-c-CCCce-------------EEEEeCCCCCcCeEEEEe---cC
Confidence 444554 789998865 38999996 688988763 2 32100 012223335678999997 47
Q ss_pred CeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeec
Q 005419 284 GRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMG 363 (697)
Q Consensus 284 G~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~ 363 (697)
+.+|+.-+. ..+|.++..++. ..++++.
T Consensus 96 ~~ly~~d~~------------------------------------~~~I~v~~~dG~--------------~~~~l~~-- 123 (619)
T 3s94_A 96 EKLYWTDSE------------------------------------TNRIEVSNLDGS--------------LRKVLFW-- 123 (619)
T ss_dssp TEEEEEETT------------------------------------TTEEEEEETTSC--------------SCEEEEC--
T ss_pred CEEEEEeCC------------------------------------CCEEEEEECCCC--------------CEEEEEe--
Confidence 889886431 126766665543 2234432
Q ss_pred cCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCC
Q 005419 364 LHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSE 443 (697)
Q Consensus 364 ~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~ 443 (697)
....+--.|+++|.+|+|||+- -+ + .++|.|++.||..
T Consensus 124 --~~l~~P~~Iavdp~~g~ly~tD--~g---------~-----~~~I~r~~~dG~~------------------------ 161 (619)
T 3s94_A 124 --QELDQPRAIALDPSSGFMYWTD--WG---------E-----VPKIERAGMDGSS------------------------ 161 (619)
T ss_dssp --SSCSCCCCEEEETTTTEEEEEE--CS---------S-----SCEEEEEETTSCS------------------------
T ss_pred --CCCCCCceEEEecCCCeEEEec--cC---------C-----CCEEEEEECCCCc------------------------
Confidence 1123345799999679999984 11 1 3689999999830
Q ss_pred CCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCce
Q 005419 444 DKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYE 483 (697)
Q Consensus 444 ~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~E 483 (697)
+..+..-.+..|.++++|+.++ +||++|.+.+..+
T Consensus 162 ----~~~l~~~~~~~P~Glald~~~~-~LY~aD~~~~~I~ 196 (619)
T 3s94_A 162 ----RFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIH 196 (619)
T ss_dssp ----CEEEECSSCSSEEEEEEETTTT-EEEEEETTTCCEE
T ss_pred ----eEEEEeCCCCCCcEEEEEccCC-EEEEEeCCCCeEE
Confidence 1233345788999999999876 7999998876533
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.81 E-value=0.00058 Score=73.80 Aligned_cols=60 Identities=8% Similarity=0.081 Sum_probs=37.4
Q ss_pred eeEEECC-CCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCce--e-eeEeCCCCCcCCeEEE
Q 005419 213 LNMVPHP-DGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGM--M-GIAFHPNFQQNGRFFV 288 (697)
Q Consensus 213 ~~m~~~p-DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GL--L-GiAfhPdF~~NG~~Yv 288 (697)
..+++.| +| +|||++..|+|++++. +.+. +. .+.. +...+..|. . +|||||+ +|++|+
T Consensus 222 ~~iav~p~~g--~lyv~d~~~~I~~~d~-~~~~---~~-----~~~~----~~~~g~~~~~P~~~ia~~p~---~g~lyv 283 (409)
T 3hrp_A 222 GAVALDETEE--WLYFVDSNKNFGRFNV-KTQE---VT-----LIKQ----LELSGSLGTNPGPYLIYYFV---DSNFYM 283 (409)
T ss_dssp CBCEECTTSS--EEEEECTTCEEEEEET-TTCC---EE-----EEEE----CCCCSCCCCSSCCEEEEETT---TTEEEE
T ss_pred EEEEEeCCCC--eEEEEECCCcEEEEEC-CCCC---EE-----EEec----ccccCCCCCCccccEEEeCC---CCEEEE
Confidence 7889999 45 7999999999999873 3221 11 0000 001122233 3 9999983 589998
Q ss_pred EE
Q 005419 289 SF 290 (697)
Q Consensus 289 sY 290 (697)
+-
T Consensus 284 ~d 285 (409)
T 3hrp_A 284 SD 285 (409)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 29
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=0.019 Score=64.45 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=45.9
Q ss_pred CCcEEEEEcccCeeEEeecCCCCCCCeeEEEEeeccCCCC----C-cccccccc-c-ccCCCCceeeEEEcCC-CcEEEE
Q 005419 558 YGRYLYTDLYGAAVWAGTENPENSGNFSTTKLSVSCDRDS----P-IQCDTVKG-S-SFPSLGFITSFGQDNR-KDIYLL 629 (697)
Q Consensus 558 ~G~ylfgD~~~G~lw~~~~~p~~~G~~~~~~i~f~~~~~~----p-~~c~~~~g-~-~~~~~grI~sf~ed~d-GeLYvl 629 (697)
.|.++++|..+.+|+.+. + .|. +..+. -.+.. + ..+.+..| . ....+.++.+++.|++ |.|||+
T Consensus 390 ~g~lyVaD~~N~rIr~i~--~--~G~--v~Tia--G~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVa 461 (496)
T 3kya_A 390 EYDFYFVDRLNFCVRKVT--P--EGI--VSTYA--GRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVH 461 (496)
T ss_dssp CEEEEEEEGGGTEEEEEC--T--TCB--EEEEE--ESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCEEEEEe--C--CCC--EEEEe--cccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEE
Confidence 578999999999998875 3 353 22221 11110 0 01122223 1 1123568999999997 999999
Q ss_pred ecC--eEEEEec
Q 005419 630 ASN--GVYRVVR 639 (697)
Q Consensus 630 ts~--gIYRIv~ 639 (697)
+.+ .|.||..
T Consensus 462 D~~N~rIrki~~ 473 (496)
T 3kya_A 462 DQVGHTIRTISM 473 (496)
T ss_dssp ETTTTEEEEEEE
T ss_pred eCCCCEEEEEEC
Confidence 974 6888875
No 30
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.76 E-value=0.0012 Score=71.17 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=43.4
Q ss_pred CCCcEEEEEecCce-eeEEECCCCCceEEEEecCc--eEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeE
Q 005419 199 PSGLCLEKVGTGAY-LNMVPHPDGSNRVFLSNQDG--KTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIA 275 (697)
Q Consensus 199 p~G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G--~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiA 275 (697)
+.+-.+..+..+.. ..+++.|||. +||+++..| .||+++. +.+. .++. + ..+......+..++|
T Consensus 159 ~~~g~~~~~~~~~~~~~ia~~~~g~-~l~~~d~~~~~~I~~~d~-~~~~--~~~~------~---g~~~~~~~~~p~~ia 225 (409)
T 3hrp_A 159 VDDNKVTTVHPGFKGGKPAVTKDKQ-RVYSIGWEGTHTVYVYMK-ASGW--APTR------I---GQLGSTFSGKIGAVA 225 (409)
T ss_dssp TTTTEEEEEEETCCBCBCEECTTSS-EEEEEBSSTTCEEEEEEG-GGTT--CEEE------E---EECCTTSCSCCCBCE
T ss_pred CCCCEEEEeeccCCCCceeEecCCC-cEEEEecCCCceEEEEEc-CCCc--eeEE------e---eeccchhcCCcEEEE
Confidence 33333444444433 2389999985 799999865 8998863 2111 1000 0 001111335678999
Q ss_pred eCCCCCcCCeEEEE
Q 005419 276 FHPNFQQNGRFFVS 289 (697)
Q Consensus 276 fhPdF~~NG~~Yvs 289 (697)
+||+ +|+||+.
T Consensus 226 v~p~---~g~lyv~ 236 (409)
T 3hrp_A 226 LDET---EEWLYFV 236 (409)
T ss_dssp ECTT---SSEEEEE
T ss_pred EeCC---CCeEEEE
Confidence 9984 7999993
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.72 E-value=0.00063 Score=66.56 Aligned_cols=146 Identities=14% Similarity=0.221 Sum_probs=88.6
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|++.+|| ++||++. .|.|++++ .++.... . ..........+|+++| +|++||.-.
T Consensus 111 ~~i~~~~~g--~l~v~~~~~~~i~~~~---~~~~~~~-------~------~~~~~~~~p~~i~~~~----~g~l~v~~~ 168 (270)
T 1rwi_B 111 EGLAVDTQG--AVYVADRGNNRVVKLA---AGSKTQT-------V------LPFTGLNDPDGVAVDN----SGNVYVTDT 168 (270)
T ss_dssp EEEEECTTC--CEEEEEGGGTEEEEEC---TTCCSCE-------E------CCCCSCCSCCCEEECT----TCCEEEEEG
T ss_pred cceEECCCC--CEEEEECCCCEEEEEE---CCCceeE-------e------eccccCCCceeEEEeC----CCCEEEEEC
Confidence 788999998 6999985 68898873 2321110 0 0111223568899997 678988643
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHG 371 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~G 371 (697)
.. .+|.+|..++. ... ... .......
T Consensus 169 ~~------------------------------------~~i~~~~~~~~--------------~~~-~~~---~~~~~~p 194 (270)
T 1rwi_B 169 DN------------------------------------NRVVKLEAESN--------------NQV-VLP---FTDITAP 194 (270)
T ss_dssp GG------------------------------------TEEEEECTTTC--------------CEE-ECC---CSSCCSE
T ss_pred CC------------------------------------CEEEEEecCCC--------------ceE-eec---ccCCCCc
Confidence 11 25666653221 111 110 0111334
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..|.+++ ||.|||+... .++|.+++.++.. + ..+
T Consensus 195 ~~i~~d~-~g~l~v~~~~-----------------~~~v~~~~~~~~~---------------~-------------~~~ 228 (270)
T 1rwi_B 195 WGIAVDE-AGTVYVTEHN-----------------TNQVVKLLAGSTT---------------S-------------TVL 228 (270)
T ss_dssp EEEEECT-TCCEEEEETT-----------------TSCEEEECTTCSC---------------C-------------EEC
T ss_pred eEEEECC-CCCEEEEECC-----------------CCcEEEEcCCCCc---------------c-------------eee
Confidence 5699999 9999998743 1358999887620 0 000
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCCCCc
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQDEY 482 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~ 482 (697)
-.-|+.+|.++++|+. + +||++|.+.+..
T Consensus 229 ~~~~~~~p~~i~~~~~-g-~l~v~~~~~~~v 257 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSD-R-TVYVADRGNDRV 257 (270)
T ss_dssp CCCSCSCEEEEEECTT-C-CEEEEEGGGTEE
T ss_pred ccCCCCCceeEEECCC-C-CEEEEECCCCEE
Confidence 1135688999999987 4 599999887643
No 32
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.63 E-value=0.0056 Score=60.79 Aligned_cols=151 Identities=12% Similarity=0.111 Sum_probs=94.5
Q ss_pred cCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCe
Q 005419 209 TGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGR 285 (697)
Q Consensus 209 ~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~ 285 (697)
.++. ..|++.|++. ++||++. .++|++++. + |.. .+ .+...+.....+||+||+ +|+
T Consensus 76 ~~~~~p~~ia~d~~~~-~lyv~d~~~~~I~~~~~-~-g~~--~~------------~~~~~~~~~P~~i~vd~~---~g~ 135 (267)
T 1npe_A 76 QDLGSPEGIALDHLGR-TIFWTDSQLDRIEVAKM-D-GTQ--RR------------VLFDTGLVNPRGIVTDPV---RGN 135 (267)
T ss_dssp TTCCCEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCS--CE------------EEECSSCSSEEEEEEETT---TTE
T ss_pred CCCCCccEEEEEecCC-eEEEEECCCCEEEEEEc-C-CCC--EE------------EEEECCCCCccEEEEeeC---CCE
Confidence 4543 7899998763 7999996 588998863 2 321 10 111112246789999983 689
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccC
Q 005419 286 FFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLH 365 (697)
Q Consensus 286 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P 365 (697)
+|+.-.... ..+|.++..++. ..+++...
T Consensus 136 lyv~~~~~~----------------------------------~~~I~~~~~dg~--------------~~~~~~~~--- 164 (267)
T 1npe_A 136 LYWTDWNRD----------------------------------NPKIETSHMDGT--------------NRRILAQD--- 164 (267)
T ss_dssp EEEEECCSS----------------------------------SCEEEEEETTSC--------------CCEEEECT---
T ss_pred EEEEECCCC----------------------------------CcEEEEEecCCC--------------CcEEEEEC---
Confidence 998643100 136767765432 12233221
Q ss_pred CCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCC
Q 005419 366 FTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDK 445 (697)
Q Consensus 366 ~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~ 445 (697)
....-..|.|++..++|||+--. .++|.+++.++.
T Consensus 165 -~~~~P~gia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~--------------------------- 199 (267)
T 1npe_A 165 -NLGLPNGLTFDAFSSQLCWVDAG-----------------THRAECLNPAQP--------------------------- 199 (267)
T ss_dssp -TCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTEE---------------------------
T ss_pred -CCCCCcEEEEcCCCCEEEEEECC-----------------CCEEEEEecCCC---------------------------
Confidence 12344579999933699997532 257999998872
Q ss_pred CCCCeEEEeccccceeeeecCCCCCeEEEEEcCCC
Q 005419 446 QLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 446 ~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d 480 (697)
..+.+.-++..|.++++|. + +||++|.+.+
T Consensus 200 --~~~~~~~~~~~P~gi~~d~--~-~lyva~~~~~ 229 (267)
T 1npe_A 200 --GRRKVLEGLQYPFAVTSYG--K-NLYYTDWKTN 229 (267)
T ss_dssp --EEEEEEECCCSEEEEEEET--T-EEEEEETTTT
T ss_pred --ceEEEecCCCCceEEEEeC--C-EEEEEECCCC
Confidence 1133445789999999983 3 6999998865
No 33
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.63 E-value=0.0021 Score=68.92 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=97.7
Q ss_pred EEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCc
Q 005419 206 KVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQ 282 (697)
Q Consensus 206 ~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~ 282 (697)
.+..++. .+|++.+.+. +||+++. .++|+++++ +|+... .+...+....-|||+|| .
T Consensus 153 ~~~~~~~~p~glavd~~~g-~lY~~d~~~~~I~~~~~--dg~~~~--------------~l~~~~l~~P~giavdp---~ 212 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHD-KLYWTDSGTSRIEVANL--DGAHRK--------------VLLWQSLEKPRAIALHP---M 212 (386)
T ss_dssp EECSSCSCCCCEEEETTTT-EEEEEETTTTEEEECBT--TSCSCE--------------EEECSSCSCEEEEEEET---T
T ss_pred EEeCCCCCccEEEEEeCCC-eEEEEcCCCCeEEEEeC--CCCceE--------------EeecCCCCCCcEEEEEc---C
Confidence 3445664 6788887653 7999997 578888753 232111 01112234568999998 4
Q ss_pred CCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEee
Q 005419 283 NGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTM 362 (697)
Q Consensus 283 NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~ 362 (697)
+|++|++-... ..+|.|+..++. ..+++...
T Consensus 213 ~g~ly~td~~~-----------------------------------~~~I~r~~~dG~--------------~~~~~~~~ 243 (386)
T 3v65_B 213 EGTIYWTDWGN-----------------------------------TPRIEASSMDGS--------------GRRIIADT 243 (386)
T ss_dssp TTEEEEEECSS-----------------------------------SCEEEEEETTSC--------------SCEEEECS
T ss_pred CCeEEEeccCC-----------------------------------CCEEEEEeCCCC--------------CcEEEEEC
Confidence 78888863210 137777776543 22334321
Q ss_pred ccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCC
Q 005419 363 GLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYS 442 (697)
Q Consensus 363 ~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~ 442 (697)
..+.--.|+|+|.++.|||+-. ..++|.|++.||.
T Consensus 244 ----~~~~PnGlavd~~~~~lY~aD~-----------------~~~~I~~~d~dG~------------------------ 278 (386)
T 3v65_B 244 ----HLFWPNGLTIDYAGRRMYWVDA-----------------KHHVIERANLDGS------------------------ 278 (386)
T ss_dssp ----SCSCEEEEEEEGGGTEEEEEET-----------------TTTEEEEECTTSC------------------------
T ss_pred ----CCCCeeeEEEeCCCCEEEEEEC-----------------CCCEEEEEeCCCC------------------------
Confidence 1234457999975789999831 2367999999872
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCC
Q 005419 443 EDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDE 481 (697)
Q Consensus 443 ~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~ 481 (697)
.+..+...++..|.+++++.+ .||++|.+.+.
T Consensus 279 ----~~~~~~~~~~~~P~giav~~~---~ly~td~~~~~ 310 (386)
T 3v65_B 279 ----HRKAVISQGLPHPFAITVFED---SLYWTDWHTKS 310 (386)
T ss_dssp ----SCEEEECSSCSSEEEEEEETT---EEEEEETTTTE
T ss_pred ----eeEEEEECCCCCceEEEEECC---EEEEeeCCCCe
Confidence 123455667899999999642 69999976653
No 34
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.63 E-value=0.0016 Score=74.69 Aligned_cols=160 Identities=16% Similarity=0.161 Sum_probs=102.8
Q ss_pred cCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCe
Q 005419 209 TGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGR 285 (697)
Q Consensus 209 ~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~ 285 (697)
.++. ++|++.+.+ ++||+++. .++|+.+.. + |+... .+...+-...-|||+|+ .++.
T Consensus 346 ~~l~~~~~ld~d~~~-~~ly~sD~~~~~I~r~~~-~-g~~~~--------------~v~~~~~~~p~GlAvD~---~~~~ 405 (619)
T 3s94_A 346 EDIRHAIAIDYDPVE-GYIYWTDDEVRAIRRSFI-D-GSGSQ--------------FVVTAQIAHPDGIAVDW---VARN 405 (619)
T ss_dssp SCCSSEEEEEEETTT-TEEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSCCCEEEEET---TTTE
T ss_pred cccCccEEEEEEcCC-CeEEEEeCCCCeEEEEEc-C-CCccE--------------EEEECCCCCcCceEEec---ccCc
Confidence 4554 788898744 38999996 688998863 3 43211 11122234567999985 3688
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccC
Q 005419 286 FFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLH 365 (697)
Q Consensus 286 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P 365 (697)
+|+.-+. ..+|.+.+.++. ..++++..
T Consensus 406 lY~tD~~------------------------------------~~~I~v~~~~G~--------------~~~~l~~~--- 432 (619)
T 3s94_A 406 LYWTDTG------------------------------------TDRIEVTRLNGT--------------MRKILISE--- 432 (619)
T ss_dssp EEEEETT------------------------------------TTEEEEEETTSC--------------SCEEEECT---
T ss_pred EEEEeCC------------------------------------CCcEEEEeCCCC--------------eEEEEEEC---
Confidence 9886321 125655655432 22344321
Q ss_pred CCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCC
Q 005419 366 FTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDK 445 (697)
Q Consensus 366 ~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~ 445 (697)
.-..--.|+++|..|+|||+- -+ + .++|.|++.||..
T Consensus 433 -~l~~P~~iavdp~~G~ly~tD--~g---------~-----~~~I~r~~~dG~~-------------------------- 469 (619)
T 3s94_A 433 -DLEEPRAIVLDPMVGYMYWTD--WG---------E-----IPKIERAALDGSD-------------------------- 469 (619)
T ss_dssp -TCCSEEEEEEETTTTEEEEEE--CS---------S-----SCEEEEEETTSCS--------------------------
T ss_pred -CCCCeeeEEEEcCCCcEEEec--CC---------C-----CCEEEEEccCCCc--------------------------
Confidence 223456799999569999974 11 0 3679999999830
Q ss_pred CCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEE
Q 005419 446 QLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDI 487 (697)
Q Consensus 446 ~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~ 487 (697)
+..+..-++..|.++++|+..+ +||++|.+.+..+.+++
T Consensus 470 --~~~l~~~~l~~P~GlalD~~~~-~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 470 --RVVLVNTSLGWPNGLALDYDEG-KIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp --CEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEES
T ss_pred --cEEEEeCCCCCCeeeEEcccCC-EEEEEECCCCEEEEEec
Confidence 1234445689999999999765 79999998876666653
No 35
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.62 E-value=0.0022 Score=67.68 Aligned_cols=155 Identities=15% Similarity=0.155 Sum_probs=97.6
Q ss_pred EecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcC
Q 005419 207 VGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQN 283 (697)
Q Consensus 207 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~N 283 (697)
+..++. .+|++.+.+. +||+++. .++|+++++ +|+... .+...+....-|||+|| .+
T Consensus 111 ~~~~~~~p~glavd~~~g-~ly~~d~~~~~I~~~~~--dG~~~~--------------~l~~~~l~~P~~iavdp---~~ 170 (349)
T 3v64_C 111 VSTGLESPGGLAVDWVHD-KLYWTDSGTSRIEVANL--DGAHRK--------------VLLWQSLEKPRAIALHP---ME 170 (349)
T ss_dssp ECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSCSCE--------------EEECTTCSCEEEEEEET---TT
T ss_pred EeCCCCCccEEEEecCCC-eEEEEcCCCCeEEEEcC--CCCceE--------------EEEeCCCCCcceEEEec---Cc
Confidence 344554 6788887553 7999996 578988863 233111 01112224468999998 46
Q ss_pred CeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeec
Q 005419 284 GRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMG 363 (697)
Q Consensus 284 G~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~ 363 (697)
|++|++-... ..+|.|+..++. ..++++.
T Consensus 171 g~ly~td~~~-----------------------------------~~~I~r~~~dG~--------------~~~~~~~-- 199 (349)
T 3v64_C 171 GTIYWTDWGN-----------------------------------TPRIEASSMDGS--------------GRRIIAD-- 199 (349)
T ss_dssp TEEEEEECSS-----------------------------------SCEEEEEETTSC--------------SCEESCC--
T ss_pred CeEEEeccCC-----------------------------------CCEEEEEeCCCC--------------CcEEEEE--
Confidence 8888864311 137777776543 1222221
Q ss_pred cCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCC
Q 005419 364 LHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSE 443 (697)
Q Consensus 364 ~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~ 443 (697)
...+.--.|+|+|.++.|||+-. ..++|.|++.||.
T Consensus 200 --~~~~~PnGla~d~~~~~lY~aD~-----------------~~~~I~~~~~dG~------------------------- 235 (349)
T 3v64_C 200 --THLFWPNGLTIDYAGRRMYWVDA-----------------KHHVIERANLDGS------------------------- 235 (349)
T ss_dssp --SSCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC-------------------------
T ss_pred --CCCCCcceEEEeCCCCEEEEEEC-----------------CCCEEEEEeCCCC-------------------------
Confidence 11234457999986789999731 2357999999882
Q ss_pred CCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCc
Q 005419 444 DKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEY 482 (697)
Q Consensus 444 ~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~ 482 (697)
.+..+...++..|.+++++. + +||++|-+.+..
T Consensus 236 ---~~~~~~~~~~~~P~giav~~--~-~ly~td~~~~~V 268 (349)
T 3v64_C 236 ---HRKAVISQGLPHPFAITVFE--D-SLYWTDWHTKSI 268 (349)
T ss_dssp ---SCEEEECSSCSSEEEEEEET--T-EEEEEETTTTEE
T ss_pred ---ceEEEEeCCCCCceEEEEEC--C-EEEEecCCCCeE
Confidence 02345566788999999963 2 699999877543
No 36
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.61 E-value=0.0071 Score=61.19 Aligned_cols=165 Identities=16% Similarity=0.199 Sum_probs=96.2
Q ss_pred EEEEEecCce--eeEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 203 CLEKVGTGAY--LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 203 ~le~va~Gl~--~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
.++.+..+.. ..+++.||| ++|++. ..|.|++++ ++.+. .. .+.........+|+++|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~i~~~d-~~~~~--~~-------------~~~~~~~~~~~~i~~~~- 96 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQG--QLFLLDVFEGNIFKIN-PETKE--IK-------------RPFVSHKANPAAIKIHK- 96 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCC--EE-------------EEEECSSSSEEEEEECT-
T ss_pred eeEEEeccCccccCcEECCCC--CEEEEECCCCEEEEEe-CCCCc--EE-------------EEeeCCCCCcceEEECC-
Confidence 3444444433 678889998 598876 468899885 33221 11 01112234678999997
Q ss_pred CCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEE
Q 005419 280 FQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRI 359 (697)
Q Consensus 280 F~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~I 359 (697)
+|++||.-..+.. ....|.+|..+.. ..+.+
T Consensus 97 ---dg~l~v~~~~~~~--------------------------------~~~~i~~~d~~~~--------------~~~~~ 127 (333)
T 2dg1_A 97 ---DGRLFVCYLGDFK--------------------------------STGGIFAATENGD--------------NLQDI 127 (333)
T ss_dssp ---TSCEEEEECTTSS--------------------------------SCCEEEEECTTSC--------------SCEEE
T ss_pred ---CCcEEEEeCCCCC--------------------------------CCceEEEEeCCCC--------------EEEEE
Confidence 5888886532100 0125555543221 22223
Q ss_pred EeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCC
Q 005419 360 LTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADN 439 (697)
Q Consensus 360 l~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DN 439 (697)
+.. ......-..|.|+| ||.||++...+.. ....++|+|++.++.
T Consensus 128 ~~~--~~~~~~~~~i~~d~-~g~l~v~~~~~~~-----------~~~~~~l~~~~~~~~--------------------- 172 (333)
T 2dg1_A 128 IED--LSTAYCIDDMVFDS-KGGFYFTDFRGYS-----------TNPLGGVYYVSPDFR--------------------- 172 (333)
T ss_dssp ECS--SSSCCCEEEEEECT-TSCEEEEECCCBT-----------TBCCEEEEEECTTSC---------------------
T ss_pred Ecc--CccCCcccceEECC-CCCEEEEeccccc-----------cCCCceEEEEeCCCC---------------------
Confidence 321 11122334689999 9999998754211 124678999998751
Q ss_pred CCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCC
Q 005419 440 PYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQ 479 (697)
Q Consensus 440 PF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~ 479 (697)
..+.+..++..|.+++|++.. ..||+++.+.
T Consensus 173 --------~~~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~ 203 (333)
T 2dg1_A 173 --------TVTPIIQNISVANGIALSTDE-KVLWVTETTA 203 (333)
T ss_dssp --------CEEEEEEEESSEEEEEECTTS-SEEEEEEGGG
T ss_pred --------EEEEeecCCCcccceEECCCC-CEEEEEeCCC
Confidence 112344566778999999974 3699988654
No 37
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.59 E-value=0.0028 Score=74.90 Aligned_cols=157 Identities=15% Similarity=0.166 Sum_probs=97.3
Q ss_pred cCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCe
Q 005419 209 TGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGR 285 (697)
Q Consensus 209 ~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~ 285 (697)
.++. .+||+.+.+. +||+++. .++|+++++ +|.... .+........-|||+|| .+|+
T Consensus 468 ~~l~~P~GLAvD~~~~-~LY~tD~~~~~I~v~~l--dG~~~~--------------~l~~~~l~~P~gIaVDp---~~g~ 527 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT--KGVKRK--------------TLFRENGSKPRAIVVDP---VHGF 527 (791)
T ss_dssp SSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSSSEE--------------EEEECTTCCEEEEEEET---TTTE
T ss_pred cCCCCcceeeeeecCC-cEEEEecCCCeEEEEeC--CCCeEE--------------EEEeCCCCCcceEEEec---CCCC
Confidence 3555 6788877763 7999996 688988864 232110 11112234478999998 4688
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccC
Q 005419 286 FFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLH 365 (697)
Q Consensus 286 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P 365 (697)
||++-... ..+|.++..++. ..++|+..
T Consensus 528 LYwtD~g~-----------------------------------~~~I~~~~~dG~--------------~~~~lv~~--- 555 (791)
T 3m0c_C 528 MYWTDWGT-----------------------------------PAKIKKGGLNGV--------------DIYSLVTE--- 555 (791)
T ss_dssp EEEEECSS-----------------------------------SCEEEEEETTSC--------------CEEEEECS---
T ss_pred EEEecCCC-----------------------------------CCeEEEEecCCC--------------ceEEEEeC---
Confidence 98863210 136777766543 23444431
Q ss_pred CCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCC
Q 005419 366 FTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDK 445 (697)
Q Consensus 366 ~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~ 445 (697)
...+--.|++++.+|.|||+- .. ..+|.|++.||..
T Consensus 556 -~l~~P~GLavD~~~~~LYwaD--~~---------------~~~I~~~d~dG~~-------------------------- 591 (791)
T 3m0c_C 556 -NIQWPNGITLDLLSGRLYWVD--SK---------------LHSISSIDVNGGN-------------------------- 591 (791)
T ss_dssp -SCSCEEEEEEETTTTEEEEEE--TT---------------TTEEEEEETTSCS--------------------------
T ss_pred -CCCCceEEEEecCCCeEEEEe--CC---------------CCcEEEEecCCCc--------------------------
Confidence 123445699997689999983 21 2579999999830
Q ss_pred CCCCeEEEe--ccccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 446 QLQPEIWAL--GFRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 446 ~~~pEI~A~--GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
+..|... .+.+|++++++.. +||++|.+.+....+|
T Consensus 592 --~~~v~~~~~~l~~P~glav~~~---~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 592 --RKTILEDEKRLAHPFSLAVFED---KVFWTDIINEAIFSAN 629 (791)
T ss_dssp --CEEEEECTTTTSSEEEEEEETT---EEEEEETTTTEEEEEE
T ss_pred --eEEEecCCCccCCCCEEEEeCC---EEEEEECCCCEEEEEe
Confidence 1122222 4789999998643 7999997765444443
No 38
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.53 E-value=0.0042 Score=71.34 Aligned_cols=156 Identities=13% Similarity=0.136 Sum_probs=101.9
Q ss_pred EecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcC
Q 005419 207 VGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQN 283 (697)
Q Consensus 207 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~N 283 (697)
+..|+. .+||..+.+. +||+++. .++|+++++ +|+.... +...+-....+||+|| .+
T Consensus 75 ~~~g~~~P~GlAvD~~~~-~LY~tD~~~~~I~v~~~--dG~~~~~--------------l~~~~l~~P~~iavdp---~~ 134 (628)
T 4a0p_A 75 VEFGLDYPEGMAVDWLGK-NLYWADTGTNRIEVSKL--DGQHRQV--------------LVWKDLDSPRALALDP---AE 134 (628)
T ss_dssp ECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSTTCEE--------------EECSSCCCEEEEEEET---TT
T ss_pred EeCCCCCcceEEEEeCCC-EEEEEECCCCEEEEEec--CCCcEEE--------------EEeCCCCCcccEEEcc---CC
Confidence 344554 6788877653 7999997 688998874 3432110 1112234568999998 47
Q ss_pred CeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeec
Q 005419 284 GRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMG 363 (697)
Q Consensus 284 G~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~ 363 (697)
|++|++-.. . ..+|.|+..+++ +.++|++
T Consensus 135 G~lY~tD~g---~--------------------------------~~~I~r~~~dG~--------------~~~~l~~-- 163 (628)
T 4a0p_A 135 GFMYWTEWG---G--------------------------------KPKIDRAAMDGS--------------ERTTLVP-- 163 (628)
T ss_dssp TEEEEEECS---S--------------------------------SCEEEEEETTSC--------------SCEEEEC--
T ss_pred CeEEEeCCC---C--------------------------------CCEEEEEeCCCC--------------ceEEEEC--
Confidence 888885320 0 137877776553 2344442
Q ss_pred cCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCC
Q 005419 364 LHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSE 443 (697)
Q Consensus 364 ~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~ 443 (697)
...+-..|++++..+.|||+-. ..++|.+++.||.
T Consensus 164 ---~~~~P~GlalD~~~~~LY~aD~-----------------~~~~I~~~d~dG~------------------------- 198 (628)
T 4a0p_A 164 ---NVGRANGLTIDYAKRRLYWTDL-----------------DTNLIESSNMLGL------------------------- 198 (628)
T ss_dssp ---SCSSEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC-------------------------
T ss_pred ---CCCCcceEEEccccCEEEEEEC-----------------CCCEEEEEcCCCC-------------------------
Confidence 1234456999995589999752 2357999999882
Q ss_pred CCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceee
Q 005419 444 DKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEV 485 (697)
Q Consensus 444 ~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEI 485 (697)
..++.+-++..|++++++.. +||++|.+.+....+
T Consensus 199 ----~~~v~~~~l~~P~glav~~~---~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 199 ----NREVIADDLPHPFGLTQYQD---YIYWTDWSRRSIERA 233 (628)
T ss_dssp ----SCEEEEECCSCEEEEEEETT---EEEEEETTTTEEEEE
T ss_pred ----ceEEeeccCCCceEEEEECC---EEEEecCCCCEEEEE
Confidence 12788889999999999862 699999765543333
No 39
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.52 E-value=0.0061 Score=63.82 Aligned_cols=154 Identities=14% Similarity=0.147 Sum_probs=96.4
Q ss_pred EEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCc
Q 005419 206 KVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQ 282 (697)
Q Consensus 206 ~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~ 282 (697)
.+..++. .+|++.+.+. +||+++. .++|+++++ +|+... .+.........|||+|| .
T Consensus 73 ~~~~~l~~p~glavd~~~g-~ly~~d~~~~~I~~~~~--dG~~~~--------------~l~~~~~~~P~giavdp---~ 132 (318)
T 3sov_A 73 VVVSGLLSPDGLACDWLGE-KLYWTDSETNRIEVSNL--DGSLRK--------------VLFWQELDQPRAIALDP---S 132 (318)
T ss_dssp EEEECCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSCSCE--------------EEECSSCSSEEEEEEEG---G
T ss_pred EEcCCCCCccEEEEEcCCC-eEEEEECCCCEEEEEEC--CCCcEE--------------EEEeCCCCCccEEEEeC---C
Confidence 3445554 6788877543 7999996 588988863 233111 01112234568999998 4
Q ss_pred CCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEee
Q 005419 283 NGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTM 362 (697)
Q Consensus 283 NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~ 362 (697)
+|++|++-... ..+|.|+..+++ ..++++..
T Consensus 133 ~g~ly~td~~~-----------------------------------~~~I~r~~~dG~--------------~~~~~~~~ 163 (318)
T 3sov_A 133 SGFMYWTDWGE-----------------------------------VPKIERAGMDGS--------------SRFIIINS 163 (318)
T ss_dssp GTEEEEEECSS-----------------------------------SCEEEEEETTSC--------------SCEEEECS
T ss_pred CCEEEEEecCC-----------------------------------CCEEEEEEcCCC--------------CeEEEEEC
Confidence 68888853210 136777776543 22334331
Q ss_pred ccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCC
Q 005419 363 GLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYS 442 (697)
Q Consensus 363 ~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~ 442 (697)
+ -..--.|+|+|.++.||++-. ..++|.|+|.||.
T Consensus 164 ~----l~~Pnglavd~~~~~lY~aD~-----------------~~~~I~~~d~dG~------------------------ 198 (318)
T 3sov_A 164 E----IYWPNGLTLDYEEQKLYWADA-----------------KLNFIHKSNLDGT------------------------ 198 (318)
T ss_dssp S----CSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC------------------------
T ss_pred C----CCCccEEEEeccCCEEEEEEC-----------------CCCEEEEEcCCCC------------------------
Confidence 1 233457999986789999731 2467999999882
Q ss_pred CCCCCCCeEEEe-ccccceeeeecCCCCCeEEEEEcCCCC
Q 005419 443 EDKQLQPEIWAL-GFRNPWRCSFDAERPSYFLCADVGQDE 481 (697)
Q Consensus 443 ~~~~~~pEI~A~-GlRNP~r~sfDp~~g~~L~~~DvG~d~ 481 (697)
..+++.. ++..|.++++|.+ .||++|.+...
T Consensus 199 -----~~~~~~~~~~~~P~glav~~~---~lywtd~~~~~ 230 (318)
T 3sov_A 199 -----NRQAVVKGSLPHPFALTLFED---ILYWTDWSTHS 230 (318)
T ss_dssp -----SCEEEECSCCSCEEEEEEETT---EEEEEETTTTE
T ss_pred -----ceEEEecCCCCCceEEEEeCC---EEEEEecCCCe
Confidence 1233333 6889999999843 58999987653
No 40
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.45 E-value=0.004 Score=63.10 Aligned_cols=62 Identities=18% Similarity=0.289 Sum_probs=45.1
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecC-CCCcccccccccCCCCccCCCCCCCCCCCCCCCe
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVD-KIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPE 450 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvD-g~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pE 450 (697)
-.|.+++ ||.|||+.-.+ |+|.|+|++ |. .-.
T Consensus 202 ~g~~~d~-~G~lwva~~~~-----------------~~v~~~d~~tG~-----------------------------~~~ 234 (297)
T 3g4e_A 202 DGMCIDA-EGKLWVACYNG-----------------GRVIRLDPVTGK-----------------------------RLQ 234 (297)
T ss_dssp EEEEEBT-TSCEEEEEETT-----------------TEEEEECTTTCC-----------------------------EEE
T ss_pred CeeEECC-CCCEEEEEcCC-----------------CEEEEEcCCCce-----------------------------EEE
Confidence 3699999 99999987542 459999987 41 123
Q ss_pred EEEeccccceeeeec-CCCCCeEEEEEcCCCC
Q 005419 451 IWALGFRNPWRCSFD-AERPSYFLCADVGQDE 481 (697)
Q Consensus 451 I~A~GlRNP~r~sfD-p~~g~~L~~~DvG~d~ 481 (697)
.+..+.++|..|+|. +. +++||++......
T Consensus 235 ~i~~p~~~~t~~~f~g~d-~~~L~vt~~~~~~ 265 (297)
T 3g4e_A 235 TVKLPVDKTTSCCFGGKN-YSEMYVTCARDGM 265 (297)
T ss_dssp EEECSSSBEEEEEEESGG-GCEEEEEEBCTTC
T ss_pred EEECCCCCceEEEEeCCC-CCEEEEEcCCcCC
Confidence 456666889999998 54 3479999876553
No 41
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.41 E-value=0.01 Score=61.44 Aligned_cols=150 Identities=15% Similarity=0.158 Sum_probs=93.3
Q ss_pred cCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCe
Q 005419 209 TGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGR 285 (697)
Q Consensus 209 ~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~ 285 (697)
.++. .+|++.+.+. +||+++. .++|.++++ + |. ..+ .+........-|||+|| .+|+
T Consensus 74 ~~~~~p~glavd~~~~-~ly~~d~~~~~I~~~~~-~-g~--~~~------------~~~~~~~~~P~~iavdp---~~g~ 133 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT-K-GV--KRK------------TLFRENGSKPRAIVVDP---VHGF 133 (316)
T ss_dssp SSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET-T-SS--SEE------------EEEECTTCCEEEEEEET---TTTE
T ss_pred CCCCCcCEEEEeecCC-eEEEEECCCCEEEEEeC-C-CC--ceE------------EEEECCCCCcceEEeCC---CCCE
Confidence 4444 6788876553 7999986 688988863 2 32 110 01112234578999998 4788
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccC
Q 005419 286 FFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLH 365 (697)
Q Consensus 286 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P 365 (697)
+|+.-... ..+|.++..+++ ..+++...
T Consensus 134 ly~~d~~~-----------------------------------~~~I~~~~~dG~--------------~~~~~~~~--- 161 (316)
T 1ijq_A 134 MYWTDWGT-----------------------------------PAKIKKGGLNGV--------------DIYSLVTE--- 161 (316)
T ss_dssp EEEEECSS-----------------------------------SCEEEEEETTSC--------------CEEEEECS---
T ss_pred EEEEccCC-----------------------------------CCeEEEEcCCCC--------------CeEEEEEC---
Confidence 88853210 126777765543 22333321
Q ss_pred CCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCC
Q 005419 366 FTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDK 445 (697)
Q Consensus 366 ~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~ 445 (697)
.-+.-..|++++.++.||++-. ..++|.++|.||.
T Consensus 162 -~~~~P~gla~d~~~~~lY~~D~-----------------~~~~I~~~d~dg~--------------------------- 196 (316)
T 1ijq_A 162 -NIQWPNGITLDLLSGRLYWVDS-----------------KLHSISSIDVNGG--------------------------- 196 (316)
T ss_dssp -SCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC---------------------------
T ss_pred -CCCCceEEEEeccCCEEEEEEC-----------------CCCeEEEEecCCC---------------------------
Confidence 2244557999985689999732 1357999999872
Q ss_pred CCCCeEEEe---ccccceeeeecCCCCCeEEEEEcCCC
Q 005419 446 QLQPEIWAL---GFRNPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 446 ~~~pEI~A~---GlRNP~r~sfDp~~g~~L~~~DvG~d 480 (697)
..++++. ++.+|.++++|. + +||++|.+.+
T Consensus 197 --~~~~~~~~~~~~~~P~giav~~--~-~ly~~d~~~~ 229 (316)
T 1ijq_A 197 --NRKTILEDEKRLAHPFSLAVFE--D-KVFWTDIINE 229 (316)
T ss_dssp --SCEEEEECTTTTSSEEEEEEET--T-EEEEEETTTT
T ss_pred --ceEEEeecCCccCCcEEEEEEC--C-EEEEEECCCC
Confidence 1234433 478999999984 3 6999997654
No 42
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.41 E-value=0.011 Score=63.61 Aligned_cols=159 Identities=14% Similarity=0.167 Sum_probs=96.8
Q ss_pred EEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCc
Q 005419 206 KVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQ 282 (697)
Q Consensus 206 ~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~ 282 (697)
.+..++. .+|++.+.+. +||+++. .++|+++++ +|.... .+...+....-|||+|| .
T Consensus 153 ~~~~~~~~p~glavD~~~~-~lY~~d~~~~~I~~~~~--~g~~~~--------------~l~~~~~~~P~~iavdp---~ 212 (400)
T 3p5b_L 153 VISRDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT--KGVKRK--------------TLFRENGSKPRAIVVDP---V 212 (400)
T ss_dssp EECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEECT--TTCSEE--------------EEEECSSCCEEEEEEET---T
T ss_pred EEeCCCCCcccEEEEecCC-ceEEEECCCCeEEEEeC--CCCceE--------------EEEeCCCCCcceEEEec---c
Confidence 3344665 6788887543 7999996 688988763 232110 11112233468999998 4
Q ss_pred CCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEee
Q 005419 283 NGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTM 362 (697)
Q Consensus 283 NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~ 362 (697)
+|++|++-... ..+|.++..++. ..++++..
T Consensus 213 ~g~ly~td~~~-----------------------------------~~~I~~~~~dG~--------------~~~~~~~~ 243 (400)
T 3p5b_L 213 HGFMYWTDWGT-----------------------------------PAKIKKGGLNGV--------------DIYSLVTE 243 (400)
T ss_dssp TTEEEEEECSS-----------------------------------SCCEEEEETTSC--------------SCEEEECS
T ss_pred cCeEEEEeCCC-----------------------------------CCEEEEEeCCCC--------------ccEEEEEC
Confidence 78888853210 025666665543 23334321
Q ss_pred ccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCC
Q 005419 363 GLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYS 442 (697)
Q Consensus 363 ~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~ 442 (697)
.-..-..|+|++.++.|||+ |. ...+|.|+|.||.
T Consensus 244 ----~l~~P~glavd~~~~~lY~a--D~---------------~~~~I~~~d~dG~------------------------ 278 (400)
T 3p5b_L 244 ----NIQWPNGITLDLLSGRLYWV--DS---------------KLHSISSIDVNGG------------------------ 278 (400)
T ss_dssp ----SCSCEEEEEEETTTTEEEEE--ET---------------TTTEEEEEETTSC------------------------
T ss_pred ----CCCceEEEEEEeCCCEEEEE--EC---------------CCCEEEEEeCCCC------------------------
Confidence 12344569999867899998 31 1357999999882
Q ss_pred CCCCCCCeEEEe---ccccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 443 EDKQLQPEIWAL---GFRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 443 ~~~~~~pEI~A~---GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
..+++.. .+..|.+++++.+ +||++|.+.+....+|
T Consensus 279 -----~~~~~~~~~~~l~~P~gl~v~~~---~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 279 -----NRKTILEDEKRLAHPFSLAVFED---KVFWTDIINEAIFSAN 317 (400)
T ss_dssp -----CCEEEEECSSTTSSEEEEEEETT---EEEEEESSSCSEEEEE
T ss_pred -----ccEEEEeCCCCCCCCEEEEEeCC---EEEEecCCCCeEEEEE
Confidence 1233333 4789999999643 6999997665433333
No 43
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.37 E-value=0.0046 Score=67.61 Aligned_cols=30 Identities=20% Similarity=0.471 Sum_probs=23.5
Q ss_pred cccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 456 FRNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 456 lRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
|..|+++++|+.++ .||++|.+.+..-.|.
T Consensus 401 ~~~P~giavd~~~g-~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 401 FNHPTSIAYDMKRK-CFYIGDCDNHRVRKIA 430 (433)
T ss_dssp CSSEEEEEEETTTT-EEEEEEGGGTEEEEEE
T ss_pred eCCCcEEEEECCCC-EEEEEeCCCCEEEEEe
Confidence 78899999996666 6999999876544443
No 44
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.33 E-value=0.00044 Score=80.35 Aligned_cols=165 Identities=9% Similarity=0.095 Sum_probs=94.7
Q ss_pred EEEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCC
Q 005419 204 LEKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNF 280 (697)
Q Consensus 204 le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF 280 (697)
.+.+..++. .+|++.+++. +||+++. .++|+++++ + +....- .... +...+.....|||+++
T Consensus 398 ~~~~~~~~~~p~gla~d~~~~-~Ly~sD~~~~~I~~~~~-~-g~~~~~---~~~~-------~i~~~~~~P~glavD~-- 462 (699)
T 1n7d_A 398 YTSLIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQL-D-RAHGVS---SYDT-------VISRDIQAPDGLAVDW-- 462 (699)
T ss_dssp EECCSCCCTTCCCCEEETTTT-EEEECCTTTTSBEEEES-C-CCCC-C---CCCC-------BCCSCC--CCCEECCC--
T ss_pred ceeeeccCcceEEEccccccC-eEEEEecCCCeEEEEec-C-CCCCCc---ceEE-------EEeCCCCCcceEEEEe--
Confidence 344444444 7888988653 8999986 578988864 2 210000 0001 1111223457899986
Q ss_pred CcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEE
Q 005419 281 QQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRIL 360 (697)
Q Consensus 281 ~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il 360 (697)
.++.||++-. . ..+|.++..++. ..++++
T Consensus 463 -~~g~LY~tD~---~---------------------------------~~~I~v~d~dg~--------------~~~~l~ 491 (699)
T 1n7d_A 463 -IHSNIYWTDS---V---------------------------------LGTVSVADTKGV--------------KRKTLF 491 (699)
T ss_dssp -SSSBCEECCT---T---------------------------------TSCEEEEBSSSC--------------CEEEEC
T ss_pred -eCCcEEEEec---c---------------------------------CCeEEEEecCCC--------------ceEEEE
Confidence 3678888421 0 024544443321 223333
Q ss_pred eeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCC
Q 005419 361 TMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNP 440 (697)
Q Consensus 361 ~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNP 440 (697)
.. ..+.-..|+++|.+|+|||+-- + ..++|.|++.||..
T Consensus 492 ~~----~~~~P~giavDp~~g~ly~td~--~--------------~~~~I~~~~~dG~~--------------------- 530 (699)
T 1n7d_A 492 RE----QGSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGVD--------------------- 530 (699)
T ss_dssp CC----SSCCCCCEECCSSSSCCEECCC--S--------------SSCCEEBCCSSSCC---------------------
T ss_pred eC----CCCCcceEEEccCCCcEEEccc--C--------------CCCeEEEEeCCCCC---------------------
Confidence 21 1223456899986689998641 1 13789999988820
Q ss_pred CCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCce
Q 005419 441 YSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYE 483 (697)
Q Consensus 441 F~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~E 483 (697)
+..+...++..|.+++||+..+ +||++|.+.+..+
T Consensus 531 -------~~~l~~~~l~~PnGlavd~~~~-~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 531 -------IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSIS 565 (699)
T ss_dssp -------CCEESCSSCSSCCCEEECTTTC-CEEEEETTTTEEE
T ss_pred -------eeEEEeCCCCCccEEEEeccCC-EEEEEecCCCeEE
Confidence 1123345788999999999866 6999998765433
No 45
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.32 E-value=0.01 Score=63.87 Aligned_cols=77 Identities=14% Similarity=0.068 Sum_probs=53.5
Q ss_pred cceeeEeCCCCCeEEEEecCCCCCCCCccc-ccc-ccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCC
Q 005419 370 HGGQILFGPEDGHLYFMVGDGEGRGDPYNF-SQN-KKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQL 447 (697)
Q Consensus 370 ~GG~L~FGP~DG~LYis~GDgg~~~DP~~~-aQn-~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~ 447 (697)
.--.+.+.+ ||.+|++.--- ..||... .+. .....|.|+|++++.
T Consensus 166 ~pND~~v~~-~G~fyvt~~~~--ftd~~~~~~e~~~~~~~g~vyr~d~~~------------------------------ 212 (355)
T 3sre_A 166 SVNDIVAVG-PEHFYATNDHY--FIDPYLKSWEMHLGLAWSFVTYYSPND------------------------------ 212 (355)
T ss_dssp SEEEEEEEE-TTEEEEEESCS--CSSHHHHHHHHHTTCCCEEEEEECTTC------------------------------
T ss_pred CCceEEEeC-CCCEEecCCcE--eCCcccccchhhccCCccEEEEEECCe------------------------------
Confidence 345789999 99999965321 2343211 111 124579999998632
Q ss_pred CCeEEEeccccceeeeecCCCCCeEEEEEcCCCC
Q 005419 448 QPEIWALGFRNPWRCSFDAERPSYFLCADVGQDE 481 (697)
Q Consensus 448 ~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~ 481 (697)
.++.+-|+..|-|++|+|.. ..||++|.+...
T Consensus 213 -~~~~~~~l~~pNGia~spDg-~~lYvadt~~~~ 244 (355)
T 3sre_A 213 -VRVVAEGFDFANGINISPDG-KYVYIAELLAHK 244 (355)
T ss_dssp -CEEEEEEESSEEEEEECTTS-SEEEEEEGGGTE
T ss_pred -EEEeecCCcccCcceECCCC-CEEEEEeCCCCe
Confidence 25789999999999999975 479999987753
No 46
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.31 E-value=0.028 Score=55.55 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=42.6
Q ss_pred CCcEEEEEecC-ce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceee-ccCCceeee
Q 005419 200 SGLCLEKVGTG-AY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHA-DVELGMMGI 274 (697)
Q Consensus 200 ~G~~le~va~G-l~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~-~~e~GLLGi 274 (697)
.|-.++.+..+ +. ..|++.||| ++||++. .+.|++++ ++ + +.+. .+.. .......+|
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~-~~-g--~~~~------------~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKG--RIIVVECKVMRVIIFD-QN-G--NVLH------------KFGCSKHLEFPNGV 169 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTS--CEEEEETTTTEEEEEC-TT-S--CEEE------------EEECTTTCSSEEEE
T ss_pred CCcEEEEecCccCCCceEEEEeCCC--CEEEEECCCCEEEEEc-CC-C--CEEE------------EeCCCCccCCcEEE
Confidence 34444555432 22 789999998 6999985 68899875 22 2 2211 0100 122357899
Q ss_pred EeCCCCCcCCeEEEEEe
Q 005419 275 AFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 275 AfhPdF~~NG~~YvsYs 291 (697)
|++| +|.+||.-+
T Consensus 170 ~~~~----~g~l~v~~~ 182 (286)
T 1q7f_A 170 VVND----KQEIFISDN 182 (286)
T ss_dssp EECS----SSEEEEEEG
T ss_pred EECC----CCCEEEEEC
Confidence 9998 588988643
No 47
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.0059 Score=66.55 Aligned_cols=29 Identities=24% Similarity=0.471 Sum_probs=23.0
Q ss_pred cccceeeeecCCCCCeEEEEEcCCCCceee
Q 005419 456 FRNPWRCSFDAERPSYFLCADVGQDEYEEV 485 (697)
Q Consensus 456 lRNP~r~sfDp~~g~~L~~~DvG~d~~EEI 485 (697)
|..|+++++|+.++ .||++|.+.+..-.|
T Consensus 398 ~~~P~giavd~~~g-~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 398 FNHPEGIVYDEERE-CFFIGDRENRRIRKI 426 (430)
T ss_dssp CSSEEEEEEETTTT-EEEEEEGGGTEEEEE
T ss_pred eCCCcEEEEECCCC-EEEEEECCCCeEEEE
Confidence 67999999999655 699999987654333
No 48
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.20 E-value=0.01 Score=60.78 Aligned_cols=158 Identities=11% Similarity=0.055 Sum_probs=90.1
Q ss_pred eeEEECC-CCCceEEEEecC------------------ceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceee
Q 005419 213 LNMVPHP-DGSNRVFLSNQD------------------GKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMG 273 (697)
Q Consensus 213 ~~m~~~p-DGs~RlfV~Eq~------------------G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLG 273 (697)
-.|+..+ || ++||++.. |.|+.++ ++.+. + .+........-|
T Consensus 129 ~~i~~d~~~G--~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d-~~~~~---~-------------~~~~~~~~~p~g 189 (322)
T 2fp8_A 129 YAVTVDQRTG--IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD-PSTKE---T-------------TLLLKELHVPGG 189 (322)
T ss_dssp EEEEECTTTC--CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE-TTTTE---E-------------EEEEEEESCCCE
T ss_pred ceEEEecCCC--EEEEECCcccccccccceehcccCCCceEEEEe-CCCCE---E-------------EEeccCCccCcc
Confidence 5688899 88 69999853 7788775 33221 1 111122345678
Q ss_pred eEeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCC
Q 005419 274 IAFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKP 353 (697)
Q Consensus 274 iAfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~ 353 (697)
||++|+ ..++||.-+. ..+|.+|..++. ..
T Consensus 190 ia~~~d---g~~lyv~d~~------------------------------------~~~I~~~~~~~~-----------~~ 219 (322)
T 2fp8_A 190 AEVSAD---SSFVLVAEFL------------------------------------SHQIVKYWLEGP-----------KK 219 (322)
T ss_dssp EEECTT---SSEEEEEEGG------------------------------------GTEEEEEESSST-----------TT
T ss_pred eEECCC---CCEEEEEeCC------------------------------------CCeEEEEECCCC-----------cC
Confidence 999983 2358886542 137788876532 01
Q ss_pred CceEEEEeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCc
Q 005419 354 LEVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNY 433 (697)
Q Consensus 354 ~~~r~Il~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 433 (697)
...+.+.+ ++. .-.|.+++ ||.|||+.......- | .....++|+|+|++|... ..|
T Consensus 220 ~~~~~~~~--~~g----P~gi~~d~-~G~l~va~~~~~~~~-~------~~~~~~~v~~~d~~G~~~----------~~~ 275 (322)
T 2fp8_A 220 GTAEVLVK--IPN----PGNIKRNA-DGHFWVSSSEELDGN-M------HGRVDPKGIKFDEFGNIL----------EVI 275 (322)
T ss_dssp TCEEEEEE--CSS----EEEEEECT-TSCEEEEEEEETTSS-T------TSCEEEEEEEECTTSCEE----------EEE
T ss_pred CccceEEe--CCC----CCCeEECC-CCCEEEEecCccccc-c------cCCCccEEEEECCCCCEE----------EEE
Confidence 12233222 332 34599999 999999986522110 1 112357899999987310 112
Q ss_pred cCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCC
Q 005419 434 SIPADNPYSEDKQLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDE 481 (697)
Q Consensus 434 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~ 481 (697)
..|...+ ++.|..++++ .+ +||+++...+.
T Consensus 276 ~~~~g~~---------------~~~~~~~~~~--~g-~L~v~~~~~~~ 305 (322)
T 2fp8_A 276 PLPPPFA---------------GEHFEQIQEH--DG-LLYIGTLFHGS 305 (322)
T ss_dssp ECCTTTT---------------TSCCCEEEEE--TT-EEEEECSSCSE
T ss_pred ECCCCCc---------------cccceEEEEe--CC-EEEEeecCCCc
Confidence 2221111 4566777764 23 69999876653
No 49
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.15 E-value=0.02 Score=56.60 Aligned_cols=56 Identities=13% Similarity=0.193 Sum_probs=35.6
Q ss_pred eeEEE-CCCCCceEEEEec--CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVP-HPDGSNRVFLSNQ--DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~-~pDGs~RlfV~Eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..+++ .++| ++||++. .+.|++++ + ++ +.+. .+.........+||++| +|.+||.
T Consensus 80 ~~i~~~~~~g--~l~v~~~~~~~~i~~~d-~-~g--~~~~------------~~~~~~~~~~~~i~~~~----~g~l~v~ 137 (286)
T 1q7f_A 80 NRVAVVRNSG--DIIVTERSPTHQIQIYN-Q-YG--QFVR------------KFGATILQHPRGVTVDN----KGRIIVV 137 (286)
T ss_dssp EEEEEETTTT--EEEEEECGGGCEEEEEC-T-TS--CEEE------------EECTTTCSCEEEEEECT----TSCEEEE
T ss_pred eEEEEEcCCC--eEEEEcCCCCCEEEEEC-C-CC--cEEE------------EecCccCCCceEEEEeC----CCCEEEE
Confidence 67777 5676 7999995 78898875 2 22 2221 01111224578999998 6889886
Q ss_pred E
Q 005419 290 F 290 (697)
Q Consensus 290 Y 290 (697)
-
T Consensus 138 ~ 138 (286)
T 1q7f_A 138 E 138 (286)
T ss_dssp E
T ss_pred E
Confidence 3
No 50
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.02 E-value=0.012 Score=60.25 Aligned_cols=80 Identities=13% Similarity=0.137 Sum_probs=50.8
Q ss_pred ceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCe
Q 005419 371 GGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPE 450 (697)
Q Consensus 371 GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pE 450 (697)
-..|.+++.||.|||+..........+...-......|.|+|+|+++. ..+
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-----------------------------~~~ 178 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK-----------------------------ETT 178 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT-----------------------------EEE
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC-----------------------------EEE
Confidence 345889885799999864321100000000001234589999998751 124
Q ss_pred EEEeccccceeeeecCCCCCeEEEEEcCCC
Q 005419 451 IWALGFRNPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 451 I~A~GlRNP~r~sfDp~~g~~L~~~DvG~d 480 (697)
+++-++..|.+++|++.. ..||++|.+.+
T Consensus 179 ~~~~~~~~p~gia~~~dg-~~lyv~d~~~~ 207 (322)
T 2fp8_A 179 LLLKELHVPGGAEVSADS-SFVLVAEFLSH 207 (322)
T ss_dssp EEEEEESCCCEEEECTTS-SEEEEEEGGGT
T ss_pred EeccCCccCcceEECCCC-CEEEEEeCCCC
Confidence 567789999999999974 36999998754
No 51
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.00 E-value=0.044 Score=56.25 Aligned_cols=167 Identities=14% Similarity=0.133 Sum_probs=92.4
Q ss_pred eeEEECC-CCCceEEEEec--CceEEEEecCCCCCCCcccccCCCCccCcccc--eeeccCCceeeeEeCCCCCcCCeEE
Q 005419 213 LNMVPHP-DGSNRVFLSNQ--DGKTWLATVPEPGSGSKLELDESNPFLDLTDQ--VHADVELGMMGIAFHPNFQQNGRFF 287 (697)
Q Consensus 213 ~~m~~~p-DGs~RlfV~Eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~--V~~~~e~GLLGiAfhPdF~~NG~~Y 287 (697)
..+++.| +| ++||++. .++|++++ + +| +.+.. +-..... ..........||||+|+ +|.+|
T Consensus 146 ~~ia~~~~~g--~lyv~d~~~~~~I~~~~-~-~g--~~~~~-----~~~~g~~~~~~~~~~~~p~gia~d~~---~g~l~ 211 (329)
T 3fvz_A 146 TDVAVEPSTG--AVFVSDGYCNSRIVQFS-P-SG--KFVTQ-----WGEESSGSSPRPGQFSVPHSLALVPH---LDQLC 211 (329)
T ss_dssp EEEEECTTTC--CEEEEECSSCCEEEEEC-T-TS--CEEEE-----ECEECCSSSCCTTEESCEEEEEEETT---TTEEE
T ss_pred cEEEEeCCCC--eEEEEeCCCCCeEEEEc-C-CC--CEEEE-----eccCCCCCCCCCcccCCCcEEEEECC---CCEEE
Confidence 7899999 66 7999993 78999885 2 23 22210 0000000 00001123689999973 48999
Q ss_pred EEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCC
Q 005419 288 VSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFT 367 (697)
Q Consensus 288 vsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~ 367 (697)
|.-.. ..+|.+|..+.. +.... +..+..
T Consensus 212 v~d~~------------------------------------~~~I~~~~~~~G--------------~~~~~--~~~~~~ 239 (329)
T 3fvz_A 212 VADRE------------------------------------NGRIQCFKTDTK--------------EFVRE--IKHASF 239 (329)
T ss_dssp EEETT------------------------------------TTEEEEEETTTC--------------CEEEE--ECCTTT
T ss_pred EEECC------------------------------------CCEEEEEECCCC--------------cEEEE--Eecccc
Confidence 96431 136777775411 11111 222221
Q ss_pred CccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCC
Q 005419 368 SHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQL 447 (697)
Q Consensus 368 ~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~ 447 (697)
...--.+.|.| |.+|..-|...-+ .....+|..++.... . +
T Consensus 240 ~~~~~~~~~~p--g~~~~~~g~~~v~----------~~~~~~v~~~~~~~g---~-~----------------------- 280 (329)
T 3fvz_A 240 GRNVFAISYIP--GFLFAVNGKPYFG----------DQEPVQGFVMNFSSG---E-I----------------------- 280 (329)
T ss_dssp TTCEEEEEEET--TEEEEEECCCCTT----------CSCCCCEEEEETTTC---C-E-----------------------
T ss_pred CCCcceeeecC--CEEEEeCCCEEec----------cCCCcEEEEEEcCCC---e-E-----------------------
Confidence 11223588888 8999987763221 112345777775431 0 0
Q ss_pred CCeEE---EeccccceeeeecCCCCCeEEEEEcCCCCceeeEE
Q 005419 448 QPEIW---ALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDI 487 (697)
Q Consensus 448 ~pEI~---A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~ 487 (697)
-..+ .-.+..|+++++|+. | .||++|.+.+..-.+++
T Consensus 281 -~~~~~~~~~~~~~p~~ia~~~d-G-~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 281 -IDVFKPVRKHFDMPHDIVASED-G-TVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp -EEEECCSSSCCSSEEEEEECTT-S-EEEEEESSSCCEEEEEE
T ss_pred -EEEEcCCCCccCCeeEEEECCC-C-CEEEEECCCCEEEEEeC
Confidence 0111 134678999999997 4 69999998875444443
No 52
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.97 E-value=0.025 Score=56.22 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=46.2
Q ss_pred ceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecC-CCCcccccccccCCCCccCCCCCCCCCCCCCCC
Q 005419 371 GGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVD-KIPSAKEISDLGLWGNYSIPADNPYSEDKQLQP 449 (697)
Q Consensus 371 GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvD-g~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 449 (697)
-..|.|++ ||.|||+... .+.|.|+|++ +. .-
T Consensus 228 p~~i~~d~-~G~l~v~~~~-----------------~~~i~~~d~~~g~-----------------------------~~ 260 (314)
T 1pjx_A 228 ADGMDFDE-DNNLLVANWG-----------------SSHIEVFGPDGGQ-----------------------------PK 260 (314)
T ss_dssp EEEEEEBT-TCCEEEEEET-----------------TTEEEEECTTCBS-----------------------------CS
T ss_pred CCceEECC-CCCEEEEEcC-----------------CCEEEEEcCCCCc-----------------------------Ee
Confidence 34699999 9999998743 2468999887 31 11
Q ss_pred eEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEec
Q 005419 450 EIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVT 489 (697)
Q Consensus 450 EI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~ 489 (697)
+.+..+...|..++|++.. ..||+++.+.+ .|.++.
T Consensus 261 ~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~---~l~~~~ 296 (314)
T 1pjx_A 261 MRIRCPFEKPSNLHFKPQT-KTIFVTEHENN---AVWKFE 296 (314)
T ss_dssp EEEECSSSCEEEEEECTTS-SEEEEEETTTT---EEEEEE
T ss_pred EEEeCCCCCceeEEECCCC-CEEEEEeCCCC---eEEEEe
Confidence 2344445788999998874 35999987653 444443
No 53
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.92 E-value=0.017 Score=61.25 Aligned_cols=66 Identities=21% Similarity=0.335 Sum_probs=48.2
Q ss_pred eeEEECCCCCceEEEEec--------------CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 213 LNMVPHPDGSNRVFLSNQ--------------DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq--------------~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
-.|++.||| +|||+.- .|+|+.++ ++ |+ +....||.+ .+++..+-|...||||||
T Consensus 138 ~~l~~~pDG--~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~-~d-G~-----~p~~npf~~--~~i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 138 GRIRFGPDG--MLYITTGDAADPRLAQDLSSLAGKILRVD-EE-GR-----PPADNPFPN--SPIWSYGHRNPQGIDWHR 206 (354)
T ss_dssp CCEEECTTS--CEEEECCCTTCGGGGTCTTCCSSEEEEEC-TT-SC-----CCTTSSSTT--CCEEEECCSCCCEEEECT
T ss_pred ceEEECCCC--cEEEEECCCCCCccccCCCCCCeEEEEEc-CC-CC-----CCCCCCCCC--CcEEEEccCCcceEEEeC
Confidence 569999999 6999852 48998875 33 43 123467754 467778888899999998
Q ss_pred CCCcCCeEEEEEee
Q 005419 279 NFQQNGRFFVSFNC 292 (697)
Q Consensus 279 dF~~NG~~YvsYs~ 292 (697)
+ +|.+|+.-+.
T Consensus 207 ~---~g~l~v~d~g 217 (354)
T 3a9g_A 207 A---SGVMVATEHG 217 (354)
T ss_dssp T---TCCEEEEECC
T ss_pred C---CCCEEEEecC
Confidence 4 6889987653
No 54
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.89 E-value=0.023 Score=57.87 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=42.7
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
-.|.+++ ||.|||+.-. .++|.|++++|.. .++
T Consensus 215 ~gi~vd~-dG~l~va~~~-----------------~~~V~~~~~~G~~-----------------------------~~~ 247 (306)
T 2p4o_A 215 DDFAFDV-EGNLYGATHI-----------------YNSVVRIAPDRST-----------------------------TII 247 (306)
T ss_dssp SSEEEBT-TCCEEEECBT-----------------TCCEEEECTTCCE-----------------------------EEE
T ss_pred CCeEECC-CCCEEEEeCC-----------------CCeEEEECCCCCE-----------------------------EEE
Confidence 4599999 9999998643 2458999887620 011
Q ss_pred --EEeccccceeeeec---CCCCCeEEEEEcCC
Q 005419 452 --WALGFRNPWRCSFD---AERPSYFLCADVGQ 479 (697)
Q Consensus 452 --~A~GlRNP~r~sfD---p~~g~~L~~~DvG~ 479 (697)
+..+++.|..++|+ +.. .+||+++.+.
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~-~~LyVt~~~~ 279 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDC-TAIYVVTNGG 279 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTT-TEEEEEECTT
T ss_pred eecccccCCceEEEEecccCCC-CEEEEECCCC
Confidence 23467889999998 543 4799999863
No 55
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.85 E-value=0.0091 Score=64.01 Aligned_cols=64 Identities=25% Similarity=0.346 Sum_probs=49.1
Q ss_pred eeEEECCCCCceEEEEe--------------cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 213 LNMVPHPDGSNRVFLSN--------------QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E--------------q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
-.|+|.||| .|||+. ..|+|+.++ ++ |+ +....||.+ .+|+..+-|...||||||
T Consensus 143 ~~l~fgpDG--~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~-~d-G~-----ip~~nPf~~--~~i~a~G~RNp~Gla~dp 211 (347)
T 3das_A 143 GRIAFGPDK--MLYAGTGESGDTGLSQDRKSLGGKILRMT-PD-GE-----PAPGNPFPG--SPVYSYGHRNVQGLAWDD 211 (347)
T ss_dssp CCEEECTTS--CEEEECBCTTCGGGTTCTTCSTTCEEEEC-TT-SS-----BCTTCSSTT--CCEEEBCCSBCCEEEECT
T ss_pred ccccCCCCC--CEEEEECCCCCCccccCCCCCCCEEEEEe-CC-CC-----ccCCCCCCC--CeEEeeCCCCcceEEECC
Confidence 469999999 699994 369999886 33 43 224678876 378888899999999998
Q ss_pred CCCcCCeEEEEEe
Q 005419 279 NFQQNGRFFVSFN 291 (697)
Q Consensus 279 dF~~NG~~YvsYs 291 (697)
+|.+|+.-.
T Consensus 212 ----~G~L~~~d~ 220 (347)
T 3das_A 212 ----KQRLFASEF 220 (347)
T ss_dssp ----TCCEEEEEC
T ss_pred ----CCCEEEEec
Confidence 488888665
No 56
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.79 E-value=0.062 Score=55.35 Aligned_cols=60 Identities=15% Similarity=0.290 Sum_probs=40.1
Q ss_pred cceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCC
Q 005419 370 HGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQP 449 (697)
Q Consensus 370 ~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 449 (697)
+...|.|+|++++||++.+ +|.++|+++. .+. .-+|.
T Consensus 226 ~p~~la~~~d~~~lyv~~~--------------------~v~~~d~~t~---------------~~~-~~~~~------- 262 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN--------------------DIWRMPVEAD---------------RVP-VRPFL------- 262 (328)
T ss_dssp CCEEEEECTTSCEEEEESS--------------------SEEEEETTCS---------------SCC-SSCSB-------
T ss_pred CceeEEEecCCCEEEEEcc--------------------EEEEEECCCC---------------cee-eeeee-------
Confidence 4567999994467888531 5899998752 110 01121
Q ss_pred eEEEeccccceeeeecCCCCCeEEEEE
Q 005419 450 EIWALGFRNPWRCSFDAERPSYFLCAD 476 (697)
Q Consensus 450 EI~A~GlRNP~r~sfDp~~g~~L~~~D 476 (697)
..+.+.|+++++||.++ +||+++
T Consensus 263 ---~~~~~~p~gi~vdp~~g-~lyva~ 285 (328)
T 3dsm_A 263 ---EFRDTKYYGLTVNPNNG-EVYVAD 285 (328)
T ss_dssp ---CCCSSCEEEEEECTTTC-CEEEEE
T ss_pred ---cCCCCceEEEEEcCCCC-eEEEEc
Confidence 12368899999999766 699998
No 57
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.78 E-value=0.05 Score=54.27 Aligned_cols=55 Identities=7% Similarity=-0.039 Sum_probs=36.2
Q ss_pred eeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeEE
Q 005419 373 QILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIW 452 (697)
Q Consensus 373 ~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 452 (697)
.|.|++ ||.||+++ + +.|.|+++++. .-+.+
T Consensus 222 ~i~~d~-~G~l~v~~-~------------------~~v~~~~~~g~-----------------------------~~~~~ 252 (296)
T 3e5z_A 222 GLRVDA-GGLIWASA-G------------------DGVHVLTPDGD-----------------------------ELGRV 252 (296)
T ss_dssp SEEEBT-TSCEEEEE-T------------------TEEEEECTTSC-----------------------------EEEEE
T ss_pred eEEECC-CCCEEEEc-C------------------CeEEEECCCCC-----------------------------EEEEE
Confidence 599999 99999988 2 34788887762 11233
Q ss_pred EeccccceeeeecCCCCCeEEEEEc
Q 005419 453 ALGFRNPWRCSFDAERPSYFLCADV 477 (697)
Q Consensus 453 A~GlRNP~r~sfDp~~g~~L~~~Dv 477 (697)
...-+ |..++|+..++..||++..
T Consensus 253 ~~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp ECSSC-CCEEEEESTTSCEEEEEET
T ss_pred ECCCC-ceeEEEECCCCCEEEEEcC
Confidence 44444 7778885333346888865
No 58
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.70 E-value=0.092 Score=53.26 Aligned_cols=59 Identities=19% Similarity=0.356 Sum_probs=36.4
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCe-EEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGR-FFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~-~Yvs 289 (697)
..+++.|||. +|++.. .+.|+++++..+| +...+ ..+......+..+++|+| +|+ +|+.
T Consensus 144 ~~~~~spdg~--l~v~~~~~~~v~~~~~~~~g--~~~~~----------~~~~~~~g~~p~~~~~sp----dg~~l~v~ 204 (347)
T 3hfq_A 144 HYTDLTPDNR--LAVIDLGSDKVYVYNVSDAG--QLSEQ----------SVLTMEAGFGPRHLVFSP----DGQYAFLA 204 (347)
T ss_dssp EEEEECTTSC--EEEEETTTTEEEEEEECTTS--CEEEE----------EEEECCTTCCEEEEEECT----TSSEEEEE
T ss_pred eEEEECCCCc--EEEEeCCCCEEEEEEECCCC--cEEEe----------eeEEcCCCCCCceEEECC----CCCEEEEE
Confidence 4589999994 999886 6789988763222 11100 111122234677899998 454 7765
No 59
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.64 E-value=0.15 Score=52.50 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=43.3
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
-.|.+++ ||.|||++-. .++|.|+|+++. .-+.
T Consensus 233 ~gi~~d~-~G~lwva~~~-----------------~~~v~~~d~~g~-----------------------------~~~~ 265 (326)
T 2ghs_A 233 DGSVCDA-EGHIWNARWG-----------------EGAVDRYDTDGN-----------------------------HIAR 265 (326)
T ss_dssp EEEEECT-TSCEEEEEET-----------------TTEEEEECTTCC-----------------------------EEEE
T ss_pred CeeEECC-CCCEEEEEeC-----------------CCEEEEECCCCC-----------------------------EEEE
Confidence 3599999 9999998732 146899988652 1133
Q ss_pred EEeccccceeeeec-CCCCCeEEEEEcCCCC
Q 005419 452 WALGFRNPWRCSFD-AERPSYFLCADVGQDE 481 (697)
Q Consensus 452 ~A~GlRNP~r~sfD-p~~g~~L~~~DvG~d~ 481 (697)
+..+.++|..++|+ +.. ..||++......
T Consensus 266 i~~~~~~~~~~af~g~d~-~~L~vt~~~~~~ 295 (326)
T 2ghs_A 266 YEVPGKQTTCPAFIGPDA-SRLLVTSAREHL 295 (326)
T ss_dssp EECSCSBEEEEEEESTTS-CEEEEEEBCTTC
T ss_pred EECCCCCcEEEEEecCCC-CEEEEEecCCCC
Confidence 45555678899998 553 479998876653
No 60
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.61 E-value=0.15 Score=51.14 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=38.7
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..+++.|||. ++|++...|.|++++. +. ++.+.. +.+. ....+....+++|+|+ ..++|+.-
T Consensus 188 ~~~~~s~dg~-~l~~~~~~~~i~~~d~-~~--~~~~~~------~~~~---~~~~~~~~~~~~~s~d---g~~l~~~~ 249 (353)
T 3vgz_A 188 TGLALDSEGK-RLYTTNADGELITIDT-AD--NKILSR------KKLL---DDGKEHFFINISLDTA---RQRAFITD 249 (353)
T ss_dssp CCCEEETTTT-EEEEECTTSEEEEEET-TT--TEEEEE------EECC---CSSSCCCEEEEEEETT---TTEEEEEE
T ss_pred ceEEECCCCC-EEEEEcCCCeEEEEEC-CC--CeEEEE------EEcC---CCCCCcccceEEECCC---CCEEEEEe
Confidence 6789999995 7999999999999874 22 222210 0000 0012334678999984 45677754
No 61
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.56 E-value=0.061 Score=60.35 Aligned_cols=29 Identities=17% Similarity=0.219 Sum_probs=23.4
Q ss_pred ccccceeeeecCCCCCeEEEEEcCCCCcee
Q 005419 455 GFRNPWRCSFDAERPSYFLCADVGQDEYEE 484 (697)
Q Consensus 455 GlRNP~r~sfDp~~g~~L~~~DvG~d~~EE 484 (697)
-|..|+++++|+.++ .||++|.+....-.
T Consensus 442 ~f~~P~gIavd~~~g-~lyVaD~~N~rIrk 470 (496)
T 3kya_A 442 RFRDVSGLVYDDVKE-MFYVHDQVGHTIRT 470 (496)
T ss_dssp CCSSEEEEEEETTTT-EEEEEETTTTEEEE
T ss_pred hcCCCcEEEEECCCC-EEEEEeCCCCEEEE
Confidence 478999999999756 69999998875333
No 62
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.55 E-value=0.16 Score=52.20 Aligned_cols=163 Identities=9% Similarity=0.132 Sum_probs=92.3
Q ss_pred CcEEEEEecCce-eeEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeecc----CCceeee
Q 005419 201 GLCLEKVGTGAY-LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADV----ELGMMGI 274 (697)
Q Consensus 201 G~~le~va~Gl~-~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~----e~GLLGi 274 (697)
+-.+.++..+-. ..|++.+|| ++||+. ..+.|++++. +.+ +.+ ..+.... .....+|
T Consensus 74 ~~~~~~i~~~~~p~~i~~~~~g--~lyv~~~~~~~v~~iD~-~t~--~~~------------~~i~~g~~~~~~~~p~~i 136 (328)
T 3dsm_A 74 FKEVGRITGFTSPRYIHFLSDE--KAYVTQIWDYRIFIINP-KTY--EIT------------GYIECPDMDMESGSTEQM 136 (328)
T ss_dssp CCEEEEEECCSSEEEEEEEETT--EEEEEEBSCSEEEEEET-TTT--EEE------------EEEECTTCCTTTCBCCCE
T ss_pred cEEEEEcCCCCCCcEEEEeCCC--eEEEEECCCCeEEEEEC-CCC--eEE------------EEEEcCCccccCCCcceE
Confidence 434455644333 788888887 799999 6799999863 322 211 0111111 1256788
Q ss_pred EeCCCCCcCCeEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCC
Q 005419 275 AFHPNFQQNGRFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPL 354 (697)
Q Consensus 275 AfhPdF~~NG~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~ 354 (697)
++ .++++||.-... ...|+.+..... .
T Consensus 137 ~~-----~~~~lyv~~~~~-----------------------------------~~~v~viD~~t~-------------~ 163 (328)
T 3dsm_A 137 VQ-----YGKYVYVNCWSY-----------------------------------QNRILKIDTETD-------------K 163 (328)
T ss_dssp EE-----ETTEEEEEECTT-----------------------------------CCEEEEEETTTT-------------E
T ss_pred EE-----ECCEEEEEcCCC-----------------------------------CCEEEEEECCCC-------------e
Confidence 88 379999973100 125555543211 1
Q ss_pred ceEEEEeeccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCcc
Q 005419 355 EVRRILTMGLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYS 434 (697)
Q Consensus 355 ~~r~Il~~~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Ys 434 (697)
.+++| . .. .....|.|+| ||.||++.-... ...|+ .+ ..++|.+||+++. .+
T Consensus 164 ~~~~i-~--~g---~~p~~i~~~~-dG~l~v~~~~~~-~~~~~--~~----~~~~v~~id~~t~----~v---------- 215 (328)
T 3dsm_A 164 VVDEL-T--IG---IQPTSLVMDK-YNKMWTITDGGY-EGSPY--GY----EAPSLYRIDAETF----TV---------- 215 (328)
T ss_dssp EEEEE-E--CS---SCBCCCEECT-TSEEEEEBCCBC-TTCSS--CB----CCCEEEEEETTTT----EE----------
T ss_pred EEEEE-E--cC---CCccceEEcC-CCCEEEEECCCc-cCCcc--cc----CCceEEEEECCCC----eE----------
Confidence 11222 1 11 1234699999 999999874321 11222 11 2588999998751 00
Q ss_pred CCCCCCCCCCCCCCCeEEEe--ccccceeeeecCCCCCeEEEEEc
Q 005419 435 IPADNPYSEDKQLQPEIWAL--GFRNPWRCSFDAERPSYFLCADV 477 (697)
Q Consensus 435 IP~DNPF~~~~~~~pEI~A~--GlRNP~r~sfDp~~g~~L~~~Dv 477 (697)
-+.+.. | ..|.+++|+|... +||+++.
T Consensus 216 --------------~~~~~~~~g-~~p~~la~~~d~~-~lyv~~~ 244 (328)
T 3dsm_A 216 --------------EKQFKFKLG-DWPSEVQLNGTRD-TLYWINN 244 (328)
T ss_dssp --------------EEEEECCTT-CCCEEEEECTTSC-EEEEESS
T ss_pred --------------EEEEecCCC-CCceeEEEecCCC-EEEEEcc
Confidence 012222 2 4799999999754 7999864
No 63
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.50 E-value=0.12 Score=53.28 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=43.7
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeE
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEI 451 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 451 (697)
..+.++| ||.||+++-+.. .....++|+|++ ++. .+.
T Consensus 137 ~~i~~d~-~G~l~v~~~~~~-----------~~~~~~~l~~~~-~g~------------------------------~~~ 173 (326)
T 2ghs_A 137 NDGRMHP-SGALWIGTMGRK-----------AETGAGSIYHVA-KGK------------------------------VTK 173 (326)
T ss_dssp EEEEECT-TSCEEEEEEETT-----------CCTTCEEEEEEE-TTE------------------------------EEE
T ss_pred CCEEECC-CCCEEEEeCCCc-----------CCCCceEEEEEe-CCc------------------------------EEE
Confidence 4689999 999999763211 123468899999 651 122
Q ss_pred EEeccccceeeeecCCCCCeEEEEEcCC
Q 005419 452 WALGFRNPWRCSFDAERPSYFLCADVGQ 479 (697)
Q Consensus 452 ~A~GlRNP~r~sfDp~~g~~L~~~DvG~ 479 (697)
+..++..|.+++|++.. ..||++|...
T Consensus 174 ~~~~~~~~~~i~~s~dg-~~lyv~~~~~ 200 (326)
T 2ghs_A 174 LFADISIPNSICFSPDG-TTGYFVDTKV 200 (326)
T ss_dssp EEEEESSEEEEEECTTS-CEEEEEETTT
T ss_pred eeCCCcccCCeEEcCCC-CEEEEEECCC
Confidence 34456678899999875 4699988653
No 64
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.45 E-value=0.068 Score=54.08 Aligned_cols=25 Identities=20% Similarity=0.290 Sum_probs=19.8
Q ss_pred eeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCC
Q 005419 373 QILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDK 417 (697)
Q Consensus 373 ~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 417 (697)
.|.+++ ||.||+++++ .|.++++++
T Consensus 243 gi~~d~-~G~lwv~~~~-------------------gv~~~~~~g 267 (305)
T 3dr2_A 243 GFCVDR-GGWLWSSSGT-------------------GVCVFDSDG 267 (305)
T ss_dssp SEEECT-TSCEEECCSS-------------------EEEEECTTS
T ss_pred eEEECC-CCCEEEecCC-------------------cEEEECCCC
Confidence 589999 9999997632 388888876
No 65
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.39 E-value=0.18 Score=50.73 Aligned_cols=24 Identities=17% Similarity=0.342 Sum_probs=19.2
Q ss_pred eeEEECCCCCceEEEEec-------CceEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-------DGKTWLAT 238 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-------~G~V~~~~ 238 (697)
..+++.||| ++||+.. .+.||.++
T Consensus 138 ~~i~~d~~g--~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 138 DDMVFDSKG--GFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp EEEEECTTS--CEEEEECCCBTTBCCEEEEEEC
T ss_pred cceEECCCC--CEEEEeccccccCCCceEEEEe
Confidence 678899998 6999876 37888875
No 66
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.39 E-value=0.17 Score=50.70 Aligned_cols=26 Identities=15% Similarity=0.383 Sum_probs=21.3
Q ss_pred eeEEECCCCCceEEEEec--CceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQ--DGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq--~G~V~~~~~ 239 (697)
..++++|||. ++|++.. .+.|++++.
T Consensus 144 ~~~~~s~dg~-~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 144 RELVADDATN-TVYISGIGKESVIWVVDG 171 (353)
T ss_dssp EEEEEETTTT-EEEEEEESSSCEEEEEET
T ss_pred ceEEECCCCC-EEEEEecCCCceEEEEcC
Confidence 5689999995 7999983 788999874
No 67
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.33 E-value=0.03 Score=57.11 Aligned_cols=121 Identities=16% Similarity=0.230 Sum_probs=71.0
Q ss_pred CCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEeecCCC
Q 005419 218 HPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNCDKII 296 (697)
Q Consensus 218 ~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs~~~~~ 296 (697)
.|||. +|||++. .++|+++++..+|. +. . .++... ....-|||++| +|.+||.-..
T Consensus 175 s~dg~-~lyv~d~~~~~I~~~~~~~~g~---~~--~--------~~~~~~-~~~P~gi~vd~----dG~l~va~~~---- 231 (306)
T 2p4o_A 175 KRFGN-FLYVSNTEKMLLLRIPVDSTDK---PG--E--------PEIFVE-QTNIDDFAFDV----EGNLYGATHI---- 231 (306)
T ss_dssp EEETT-EEEEEETTTTEEEEEEBCTTSC---BC--C--------CEEEEE-SCCCSSEEEBT----TCCEEEECBT----
T ss_pred CcCCC-EEEEEeCCCCEEEEEEeCCCCC---CC--c--------cEEEec-cCCCCCeEECC----CCCEEEEeCC----
Confidence 67874 7999997 68999987532121 10 0 112211 13578899997 6889886431
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCCCCccceeeEe
Q 005419 297 WPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHFTSHHGGQILF 376 (697)
Q Consensus 297 ~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~~H~GG~L~F 376 (697)
..+|.+|..++ +..++..+..| ...-..+.|
T Consensus 232 --------------------------------~~~V~~~~~~G---------------~~~~~~~~~~~--~~~p~~~a~ 262 (306)
T 2p4o_A 232 --------------------------------YNSVVRIAPDR---------------STTIIAQAEQG--VIGSTAVAF 262 (306)
T ss_dssp --------------------------------TCCEEEECTTC---------------CEEEEECGGGT--CTTEEEEEE
T ss_pred --------------------------------CCeEEEECCCC---------------CEEEEeecccc--cCCceEEEE
Confidence 12566664321 12223222222 234456999
Q ss_pred C---CCC-CeEEEEecCCCCCCCCccccccccCCCceEEEEecCC
Q 005419 377 G---PED-GHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDK 417 (697)
Q Consensus 377 G---P~D-G~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 417 (697)
+ | | +.|||+...+.. .+ .+.....|+|+||++..
T Consensus 263 ~g~~~-d~~~LyVt~~~~~~--~~----~~~~~~~g~v~~i~~~~ 300 (306)
T 2p4o_A 263 GQTEG-DCTAIYVVTNGGMF--LP----PPTGVVPANVVRLEVGK 300 (306)
T ss_dssp CCSTT-TTTEEEEEECTTSS--SC----CTTCCCCEEEEEEECSS
T ss_pred ecccC-CCCEEEEECCCCcc--cC----CCcccccceEEEEecCC
Confidence 8 8 7 699999985322 12 22346789999999754
No 68
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.30 E-value=0.012 Score=68.22 Aligned_cols=62 Identities=16% Similarity=0.239 Sum_probs=42.8
Q ss_pred cceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCC
Q 005419 370 HGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQP 449 (697)
Q Consensus 370 ~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 449 (697)
.-..|+|+|..++|||+-.. .++|.+++.||. ..
T Consensus 541 ~PnGlavd~~~~~LY~aD~~-----------------~~~I~~~d~dG~-----------------------------~~ 574 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGG-----------------------------NR 574 (699)
T ss_dssp SCCCEEECTTTCCEEEEETT-----------------TTEEEEECSSSS-----------------------------CC
T ss_pred CccEEEEeccCCEEEEEecC-----------------CCeEEEEccCCC-----------------------------ce
Confidence 34469999855899997522 357999999872 01
Q ss_pred eEEE---eccccceeeeecCCCCCeEEEEEcCCC
Q 005419 450 EIWA---LGFRNPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 450 EI~A---~GlRNP~r~sfDp~~g~~L~~~DvG~d 480 (697)
+++. -.+.+|.++++|.. +||++|.+.+
T Consensus 575 ~~~~~~~~~~~~P~glavd~~---~lywtd~~~~ 605 (699)
T 1n7d_A 575 KTILEDEKRLAHPFSLAVFED---KVFWTDIINE 605 (699)
T ss_dssp EEECCCSSSCSSCCCCEEETT---EEEEECSTTT
T ss_pred EEEEecCCcCCCceEeEEECC---EEEEEeCCCC
Confidence 2222 24689999999864 6999996554
No 69
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.26 E-value=0.3 Score=48.32 Aligned_cols=63 Identities=19% Similarity=0.280 Sum_probs=38.2
Q ss_pred eeEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..+++.|||. ++|++. ..|.|+++++..++. ...+ .. .........+..+++|+|+ ..++|+.
T Consensus 132 ~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~--~~~~------~~--~~~~~~~~~~~~~~~~~pd---g~~l~~~ 195 (343)
T 1ri6_A 132 HSANISPDNR-TLWVPALKQDRICLFTVSDDGH--LVAQ------DP--AEVTTVEGAGPRHMVFHPN---EQYAYCV 195 (343)
T ss_dssp CCCEECTTSS-EEEEEEGGGTEEEEEEECTTSC--EEEE------EE--EEEECSTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCCC-EEEEecCCCCEEEEEEecCCCc--eeee------cc--cccccCCCCCcceEEECCC---CCEEEEE
Confidence 6789999995 799998 689999987632232 1100 00 0111122346778999984 3357665
No 70
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.18 E-value=0.25 Score=49.96 Aligned_cols=30 Identities=13% Similarity=0.229 Sum_probs=23.3
Q ss_pred eeEEECCCCCceEEEEe-cCceEEEEecCCCC
Q 005419 213 LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPG 243 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~g 243 (697)
..+++.|||. ++|++. ..|.|.++++..+|
T Consensus 89 ~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 89 AYVAVDEARQ-LVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp SEEEEETTTT-EEEEEETTTTEEEEEEECTTS
T ss_pred EEEEECCCCC-EEEEEeCCCCEEEEEEeCCCC
Confidence 6789999995 699988 57888888764333
No 71
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.05 E-value=0.052 Score=56.21 Aligned_cols=135 Identities=18% Similarity=0.190 Sum_probs=79.2
Q ss_pred eeEEECCCCCceEEEEecCc-eEEEEecC--CCCCCCcccccCCCCccCcccceeeccCCc-eeeeEeCCCCCcCCeEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDG-KTWLATVP--EPGSGSKLELDESNPFLDLTDQVHADVELG-MMGIAFHPNFQQNGRFFV 288 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G-~V~~~~~p--~~gsg~~l~~~~~~pflDl~~~V~~~~e~G-LLGiAfhPdF~~NG~~Yv 288 (697)
-+|++.|||. +||+++..| +||.++.. .++. +. ..+.+. .+...++.| .-|||++| +|.+|+
T Consensus 198 ~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~---~~--~~~~~~----~~~~~g~~g~pdgia~d~----~G~l~v 263 (343)
T 2qe8_A 198 NGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQ---LT--DAELGS----KIERYSEKPICDGISIDK----DHNIYV 263 (343)
T ss_dssp EEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTT---CC--HHHHHT----TCEEEEECCSCSCEEECT----TCCEEE
T ss_pred ceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCC---CC--hhhhhc----ceEecccCCCCceEEECC----CCCEEE
Confidence 4689999995 799999866 88887521 0111 00 000011 111112333 46899997 589999
Q ss_pred EEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEE-cCCcccccccccccCCCceEEEEeeccCCC
Q 005419 289 SFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSA-NGTKTVQHSSVASVKPLEVRRILTMGLHFT 367 (697)
Q Consensus 289 sYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~-~~~~~~~~s~~~~~~~~~~r~Il~~~~P~~ 367 (697)
.-... .+|.+|.. ++ +.+++.. .| .
T Consensus 264 a~~~~------------------------------------~~V~~~d~~~G---------------~~~~~~~--~~-~ 289 (343)
T 2qe8_A 264 GDLAH------------------------------------SAIGVITSADR---------------AYKLLVT--DE-K 289 (343)
T ss_dssp EEGGG------------------------------------TEEEEEETTTT---------------EEEEEEE--CG-G
T ss_pred EccCC------------------------------------CeEEEEECCCC---------------CEEEEEE--CC-c
Confidence 75421 36777764 21 2333432 22 1
Q ss_pred CccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCC
Q 005419 368 SHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDK 417 (697)
Q Consensus 368 ~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 417 (697)
..+--.|.|++ ||.|||+....... -.|+...++...-+.|+|++++.
T Consensus 290 ~~~p~~va~~~-~g~l~v~~~~~~~~-~~f~~~~~~~~~~~~i~~~~~~~ 337 (343)
T 2qe8_A 290 LSWTDSFNFGS-DGYLYFDCNQLHHS-APLNAGENISAPPYYIFRLKPLA 337 (343)
T ss_dssp GSCEEEEEECT-TSCEEEEECCGGGS-GGGBTTCCCCCSCEEEEEECCSS
T ss_pred eecCCeeEECC-CCcEEEEeCccccc-cccccCCCcCcCCeEEEEEECCC
Confidence 23445799999 99999998764211 12333456666668999998764
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.03 E-value=0.33 Score=48.37 Aligned_cols=74 Identities=14% Similarity=0.216 Sum_probs=44.5
Q ss_pred CcEEEEEecCce-eeEEECCCCCceEEEEecC-ce-EEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY-LNMVPHPDGSNRVFLSNQD-GK-TWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~-G~-V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
+-.+..+..+-. ..++++|||. ++|+++.. +. |+++++..++ .. .+....+ .....+..+++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~i~~~~~~~~g--~~---------~~~~~~~-~~~~~~~~~~~~s 184 (331)
T 3u4y_A 118 NKFISTIPIPYDAVGIAISPNGN-GLILIDRSSANTVRRFKIDADG--VL---------FDTGQEF-ISGGTRPFNITFT 184 (331)
T ss_dssp TEEEEEEECCTTEEEEEECTTSS-CEEEEEETTTTEEEEEEECTTC--CE---------EEEEEEE-ECSSSSEEEEEEC
T ss_pred CCeEEEEECCCCccceEECCCCC-EEEEEecCCCceEEEEEECCCC--cE---------eecCCcc-ccCCCCccceEEC
Confidence 444555554444 7899999995 69999874 77 8887764322 11 1111111 1334567899999
Q ss_pred CCCCcCCeEEEEE
Q 005419 278 PNFQQNGRFFVSF 290 (697)
Q Consensus 278 PdF~~NG~~YvsY 290 (697)
|+ ..++|+..
T Consensus 185 pd---g~~l~v~~ 194 (331)
T 3u4y_A 185 PD---GNFAFVAN 194 (331)
T ss_dssp TT---SSEEEEEE
T ss_pred CC---CCEEEEEe
Confidence 84 23477764
No 73
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.98 E-value=0.38 Score=49.75 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=38.0
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeec-cCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHAD-VELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~-~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..++++|||. ++|+++. .+.|+++++...| +...+ ..+... ...+..+++|+|+ ..++|+.
T Consensus 148 ~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~g--~~~~~----------~~~~~~~~g~~p~~~~~spd---g~~l~v~ 210 (365)
T 1jof_A 148 HGMVFDPTET-YLYSADLTANKLWTHRKLASG--EVELV----------GSVDAPDPGDHPRWVAMHPT---GNYLYAL 210 (365)
T ss_dssp EEEEECTTSS-EEEEEETTTTEEEEEEECTTS--CEEEE----------EEEECSSTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCCC-EEEEEcCCCCEEEEEEECCCC--CEEEe----------eeEecCCCCCCCCEeEECCC---CCEEEEE
Confidence 7899999995 6898886 5799998753122 21100 011111 1457889999994 2367765
No 74
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.90 E-value=0.56 Score=48.38 Aligned_cols=71 Identities=30% Similarity=0.274 Sum_probs=43.9
Q ss_pred EEEEEecCce--eeEEECCCCCceEEEEe-c--Cc--eEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeE
Q 005419 203 CLEKVGTGAY--LNMVPHPDGSNRVFLSN-Q--DG--KTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIA 275 (697)
Q Consensus 203 ~le~va~Gl~--~~m~~~pDGs~RlfV~E-q--~G--~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiA 275 (697)
.+|+|++... ..+++.||| |+||+. + .| +||.++ +| + + .+|-+.... .........||+
T Consensus 8 ~~~~v~~~~~~p~~va~~~~g--~~~v~~~~~~~~~~~l~~~~---~g--~-~-----~~~p~~~~~-~~~~~~~p~gv~ 73 (343)
T 2qe8_A 8 RLEVVAELSLAPGNITLTPDG--RLFLSLHQFYQPEMQVAELT---QD--G-L-----IPFPPQSGN-AIITFDTVLGIK 73 (343)
T ss_dssp CCEEEEEESSCEEEEEECTTS--CEEEEECGGGCCSCSEEEEE---TT--E-E-----EESCCCCSS-CCCCCSCEEEEE
T ss_pred eeEEEEEcCCCcceEEECCCC--CEEEEeCCCCCCceEEEEEC---CC--C-e-----ecCCCcccC-cccceeEeeEEE
Confidence 4566765542 789999998 899996 3 35 787764 23 2 2 133322110 112234578999
Q ss_pred eCCCCCcCCeEEEEEe
Q 005419 276 FHPNFQQNGRFFVSFN 291 (697)
Q Consensus 276 fhPdF~~NG~~YvsYs 291 (697)
|+| +|++||.-+
T Consensus 74 ~d~----~g~L~v~D~ 85 (343)
T 2qe8_A 74 SDG----NGIVWMLDN 85 (343)
T ss_dssp ECS----SSEEEEEEC
T ss_pred EcC----CCcEEEEcC
Confidence 997 589999754
No 75
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.86 E-value=0.93 Score=46.10 Aligned_cols=65 Identities=11% Similarity=0.151 Sum_probs=37.4
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCC----CcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCC-eE
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSG----SKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNG-RF 286 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg----~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG-~~ 286 (697)
..++++|||. ++|++.. .+.|+++.+... .+ +.+.. ......+......+..+++|+| +| ++
T Consensus 158 ~~~~~spdg~-~l~~~~~~~~~v~v~~~~~~-~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~sp----dg~~l 225 (361)
T 3scy_A 158 HCVRITPDGK-YLLADDLGTDQIHKFNINPN-ANADNKEKFLT------KGTPEAFKVAPGSGPRHLIFNS----DGKFA 225 (361)
T ss_dssp EEEEECTTSS-EEEEEETTTTEEEEEEECTT-CCTTTCCCCEE------EEEEEEEECCTTCCEEEEEECT----TSSEE
T ss_pred eEEEECCCCC-EEEEEeCCCCEEEEEEEcCC-CCcccccceee------cccccceecCCCCCCeEEEEcC----CCCEE
Confidence 4589999995 6889886 688988865321 11 10100 0000011223345678899998 45 46
Q ss_pred EEE
Q 005419 287 FVS 289 (697)
Q Consensus 287 Yvs 289 (697)
|+.
T Consensus 226 ~v~ 228 (361)
T 3scy_A 226 YLI 228 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 76
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.77 E-value=0.036 Score=56.36 Aligned_cols=71 Identities=15% Similarity=0.258 Sum_probs=49.1
Q ss_pred EEEEEec-Cce--eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 203 CLEKVGT-GAY--LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 203 ~le~va~-Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
+..++.. |+. ..|+++||| +||++ ..|++|..+.+. +. ...++.-...|-..+..|+..+.|||
T Consensus 31 ~a~~iG~~gw~~~~~laf~P~G--~LYaV-~~G~Ly~~~~~t-~~--------~~~W~~s~t~IG~~Gw~~F~a~~fD~- 97 (236)
T 1tl2_A 31 RATLIGKGGWSNFKFLFLSPGG--ELYGV-LNDKIYKGTPPT-HD--------NDNWMGRAKKIGNGGWNQFQFLFFDP- 97 (236)
T ss_dssp HSEEEESSSCTTCSEEEECTTS--CEEEE-ETTEEEEESCCC-ST--------TCCHHHHCEEEECSCGGGCSEEEECT-
T ss_pred hccccCccccccceeEEECCCc--cEEEE-eCCeEEEECCCC-CC--------cccccccccEecccccccceEEEECC-
Confidence 5566665 455 689999998 69999 999999876322 21 12223322334334667789999998
Q ss_pred CCcCCeEEEE
Q 005419 280 FQQNGRFFVS 289 (697)
Q Consensus 280 F~~NG~~Yvs 289 (697)
||.||+.
T Consensus 98 ---~G~LYav 104 (236)
T 1tl2_A 98 ---NGYLYAV 104 (236)
T ss_dssp ---TSCEEEE
T ss_pred ---CCCEEEe
Confidence 8999998
No 77
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.71 E-value=0.14 Score=54.77 Aligned_cols=67 Identities=18% Similarity=0.124 Sum_probs=43.7
Q ss_pred ceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCC-ceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCC
Q 005419 371 GGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLL-GKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQP 449 (697)
Q Consensus 371 GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~-GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 449 (697)
.-.|+.++ +|..||+-- .. ++|+|+++||.. .
T Consensus 139 ~nDvavD~-~GnaYVt~s-----------------~~~~~I~rV~pdG~~-----------------------------~ 171 (334)
T 2p9w_A 139 VVQSAQDR-DGNSYVAFA-----------------LGMPAIARVSADGKT-----------------------------V 171 (334)
T ss_dssp EEEEEECT-TSCEEEEEE-----------------ESSCEEEEECTTSCC-----------------------------E
T ss_pred CceeEECC-CCCEEEeCC-----------------CCCCeEEEEeCCCCE-----------------------------E
Confidence 44799999 999999621 22 779999999931 1
Q ss_pred eEEEecc------ccceeeeecCCCCCeEEEEEcCCCCceeeE
Q 005419 450 EIWALGF------RNPWRCSFDAERPSYFLCADVGQDEYEEVD 486 (697)
Q Consensus 450 EI~A~Gl------RNP~r~sfDp~~g~~L~~~DvG~d~~EEIn 486 (697)
.+|..-. ..+-|++++|.. ..|++.|. ....-.++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~-~g~L~~fD 212 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHS-NKLIAFGG-PRALTAFD 212 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTT-TEEEEESS-SSSEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCC-CEEEEEcC-CCeEEEEc
Confidence 2232211 235599999975 46888877 43344444
No 78
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.49 E-value=0.2 Score=52.74 Aligned_cols=28 Identities=25% Similarity=0.318 Sum_probs=22.9
Q ss_pred cEEEEEecCce--eeEEECC-CCCceEEEEecC
Q 005419 202 LCLEKVGTGAY--LNMVPHP-DGSNRVFLSNQD 231 (697)
Q Consensus 202 ~~le~va~Gl~--~~m~~~p-DGs~RlfV~Eq~ 231 (697)
-..|.++.|++ +.|++.| +| +|||+|..
T Consensus 192 ~~~~i~a~G~rnp~g~a~d~~~g--~l~v~d~g 222 (352)
T 2ism_A 192 ARPEVYSLGHRNPQGLAWHPKTG--ELFSSEHG 222 (352)
T ss_dssp SCTTEEEECCSEECCCEECTTTC--CEEEEEEC
T ss_pred CCccEEEEcCCCcccEEEECCCC--CEEEEEcC
Confidence 35678899998 9999999 55 79999963
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.01 E-value=1.2 Score=44.22 Aligned_cols=67 Identities=12% Similarity=0.126 Sum_probs=39.0
Q ss_pred EEEEecCce-ee-EEECCCCCceEEEEecCc---eEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 204 LEKVGTGAY-LN-MVPHPDGSNRVFLSNQDG---KTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 204 le~va~Gl~-~~-m~~~pDGs~RlfV~Eq~G---~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
...+..+.. .. ++++|||. ++++....| .|+++++ +. ++.++ . .....+..+++|+|
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~-~~--~~~~~------------~--~~~~~~~~~~~~sp 137 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSF-LK--NKFIS------------T--IPIPYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEET-TT--TEEEE------------E--EECCTTEEEEEECT
T ss_pred EEecccCCCCccceEECCCCC-EEEEecCCCCcccEEEEEC-CC--CCeEE------------E--EECCCCccceEECC
Confidence 444444444 56 99999995 677555553 8999874 22 22211 1 11233468999998
Q ss_pred CCCcCCeEEEEEe
Q 005419 279 NFQQNGRFFVSFN 291 (697)
Q Consensus 279 dF~~NG~~YvsYs 291 (697)
+ ..++|+.-.
T Consensus 138 d---g~~l~~~~~ 147 (331)
T 3u4y_A 138 N---GNGLILIDR 147 (331)
T ss_dssp T---SSCEEEEEE
T ss_pred C---CCEEEEEec
Confidence 3 225777543
No 80
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.48 E-value=4.8 Score=44.74 Aligned_cols=75 Identities=8% Similarity=0.048 Sum_probs=47.6
Q ss_pred CCcEEEEEecCce-eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 200 SGLCLEKVGTGAY-LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 200 ~G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
.|-++..+..|.. ..++++|||. ++|++.+.|.|+++++. ..+++.+ ..+. ...+..++||+|
T Consensus 168 t~~~~~~i~~g~~~~~v~~spdg~-~l~v~~~d~~V~v~D~~-~~t~~~~------------~~i~--~g~~p~~va~sp 231 (543)
T 1nir_A 168 SKKIVKVIDTGYAVHISRMSASGR-YLLVIGRDARIDMIDLW-AKEPTKV------------AEIK--IGIEARSVESSK 231 (543)
T ss_dssp TCCEEEEEECSTTEEEEEECTTSC-EEEEEETTSEEEEEETT-SSSCEEE------------EEEE--CCSEEEEEEECC
T ss_pred CceEEEEEecCcccceEEECCCCC-EEEEECCCCeEEEEECc-CCCCcEE------------EEEe--cCCCcceEEeCC
Confidence 3556667766655 6788999995 89999999999998741 1122111 1222 234678999998
Q ss_pred CCC-cCCeEEEEE
Q 005419 279 NFQ-QNGRFFVSF 290 (697)
Q Consensus 279 dF~-~NG~~YvsY 290 (697)
-=. ...++|+.-
T Consensus 232 ~~~~dg~~l~v~~ 244 (543)
T 1nir_A 232 FKGYEDRYTIAGA 244 (543)
T ss_dssp STTCTTTEEEEEE
T ss_pred CcCCCCCEEEEEE
Confidence 111 145688754
No 81
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.46 E-value=4.3 Score=41.22 Aligned_cols=66 Identities=18% Similarity=0.412 Sum_probs=40.7
Q ss_pred EEEEEecCce-eeEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCC
Q 005419 203 CLEKVGTGAY-LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNF 280 (697)
Q Consensus 203 ~le~va~Gl~-~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF 280 (697)
++..+..+.. ..|+++|||. ++|++. ..|.|+++++ +. ++.+. .+ .......+++|+|+
T Consensus 24 ~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~d~~i~v~d~-~~--~~~~~------------~~--~~~~~v~~~~~spd- 84 (391)
T 1l0q_A 24 VTATIPVGSNPMGAVISPDGT-KVYVANAHSNDVSIIDT-AT--NNVIA------------TV--PAGSSPQGVAVSPD- 84 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSS-EEEEEEGGGTEEEEEET-TT--TEEEE------------EE--ECSSSEEEEEECTT-
T ss_pred EEEEeecCCCcceEEECCCCC-EEEEECCCCCeEEEEEC-CC--CeEEE------------EE--ECCCCccceEECCC-
Confidence 3444443333 7899999995 677776 6899999874 22 22211 11 12237889999984
Q ss_pred CcCCeEEEE
Q 005419 281 QQNGRFFVS 289 (697)
Q Consensus 281 ~~NG~~Yvs 289 (697)
..++|+.
T Consensus 85 --g~~l~~~ 91 (391)
T 1l0q_A 85 --GKQVYVT 91 (391)
T ss_dssp --SSEEEEE
T ss_pred --CCEEEEE
Confidence 3456665
No 82
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.29 E-value=5.3 Score=40.66 Aligned_cols=160 Identities=13% Similarity=0.230 Sum_probs=89.8
Q ss_pred eeEEECCCCCceEEE-EecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFL-SNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV-~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
-+|++.||+ +++|+ .++.++|+.++. + ++.++ .+...+..-+=|||+.+ +|.+||+.-
T Consensus 30 SGla~~~~~-~~L~aV~d~~~~I~~ld~-~---g~v~~------------~i~l~g~~D~EGIa~~~----~g~~~vs~E 88 (255)
T 3qqz_A 30 SSLTWSAQS-NTLFSTINKPAAIVEMTT-N---GDLIR------------TIPLDFVKDLETIEYIG----DNQFVISDE 88 (255)
T ss_dssp EEEEEETTT-TEEEEEEETTEEEEEEET-T---CCEEE------------EEECSSCSSEEEEEECS----TTEEEEEET
T ss_pred ceeEEeCCC-CEEEEEECCCCeEEEEeC-C---CCEEE------------EEecCCCCChHHeEEeC----CCEEEEEEC
Confidence 689999986 48996 667899998873 2 33321 22223334567889874 788877631
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcCCcccccccccccCCCceEEEEeeccCC--CCc
Q 005419 292 CDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANGTKTVQHSSVASVKPLEVRRILTMGLHF--TSH 369 (697)
Q Consensus 292 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~~~~~~~s~~~~~~~~~~r~Il~~~~P~--~~H 369 (697)
. ..+|..|.++.. .+.+.+-...+|. ..+
T Consensus 89 -~-----------------------------------~~~l~~~~v~~~-------------~~i~~~~~~~~~~~~~~~ 119 (255)
T 3qqz_A 89 -R-----------------------------------DYAIYVISLTPN-------------SEVKILKKIKIPLQESPT 119 (255)
T ss_dssp -T-----------------------------------TTEEEEEEECTT-------------CCEEEEEEEECCCSSCCC
T ss_pred -C-----------------------------------CCcEEEEEcCCC-------------Ceeeeeeeeccccccccc
Confidence 1 126667777533 0112222223332 234
Q ss_pred cce--eeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCC
Q 005419 370 HGG--QILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQL 447 (697)
Q Consensus 370 ~GG--~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~ 447 (697)
+.| .|+++|..+.||++.... | -+|++++ |.+... ..+|.. .|-..
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~-----p-----------~~i~~~~--g~~~~~---------~l~i~~-~~~~~---- 167 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKN-----P-----------IEVYKVN--GLLSSN---------ELHISK-DKALQ---- 167 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESS-----S-----------EEEEEEE--STTCSS---------CCEEEE-CHHHH----
T ss_pred cCCcceEEEeCCCCEEEEEECcC-----C-----------ceEEEEc--ccccCC---------ceeeec-chhhc----
Confidence 555 799999445899976331 2 2577776 311110 122321 11000
Q ss_pred CCeEEEeccccceeeeecCCCCCeEEEEEcCC
Q 005419 448 QPEIWALGFRNPWRCSFDAERPSYFLCADVGQ 479 (697)
Q Consensus 448 ~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~ 479 (697)
. ..-+|++-+++|||.++ +||+-....
T Consensus 168 -~---~~~~~d~S~l~~dp~tg-~lliLS~~s 194 (255)
T 3qqz_A 168 -R---QFTLDDVSGAEFNQQKN-TLLVLSHES 194 (255)
T ss_dssp -H---TCCSSCCCEEEEETTTT-EEEEEETTT
T ss_pred -c---ccccCCceeEEEcCCCC-eEEEEECCC
Confidence 0 11257899999999997 688875533
No 83
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.20 E-value=0.74 Score=48.48 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=30.7
Q ss_pred CCCeEEEeccccceeeeecCCCCCe-EEEEEcCCCCceeeEEecc
Q 005419 447 LQPEIWALGFRNPWRCSFDAERPSY-FLCADVGQDEYEEVDIVTK 490 (697)
Q Consensus 447 ~~pEI~A~GlRNP~r~sfDp~~g~~-L~~~DvG~d~~EEIn~I~k 490 (697)
..-|++|-||.+|+.++|+|.. + ||++|.. -.|.+|..
T Consensus 8 ~~~~~va~~l~~P~~i~~~pdG--~~l~V~e~~----G~i~~~~~ 46 (353)
T 2g8s_A 8 VNVEVLQDKLDHPWALAFLPDN--HGMLITLRG----GELRHWQA 46 (353)
T ss_dssp SEEEEEEEEESSEEEEEECSTT--CCEEEEETT----TEEEEEET
T ss_pred cEEEEEECCCCCcEEEEEcCCC--CEEEEEeCC----ceEEEEeC
Confidence 4568999999999999999974 6 9999974 35777753
No 84
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.03 E-value=1.7 Score=44.72 Aligned_cols=33 Identities=9% Similarity=-0.038 Sum_probs=27.9
Q ss_pred cceeeeecCCCCCeEEEEEcCCCCceeeEEeccC
Q 005419 458 NPWRCSFDAERPSYFLCADVGQDEYEEVDIVTKG 491 (697)
Q Consensus 458 NP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~kG 491 (697)
-|.|++||+.+. +||++.-.++..=||+++.+.
T Consensus 207 v~nGIa~~~~~~-~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 207 VLNGIAWDQENK-RIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEEECC
T ss_pred ceEEEEEcCCCC-EEEEECCCCCeEEEEEEeccc
Confidence 357999999864 899999999888899988764
No 85
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.65 E-value=6.9 Score=39.69 Aligned_cols=68 Identities=16% Similarity=0.362 Sum_probs=41.9
Q ss_pred CcEEEEEecCce-eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 201 GLCLEKVGTGAY-LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 201 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
|-.+..+..+-. ..+++.|||. +++++.. .|.|+++++ +. ++.+. ......+..+++|+|
T Consensus 64 ~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~v~v~d~-~~--~~~~~--------------~~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 64 NNVIATVPAGSSPQGVAVSPDGK-QVYVTNMASSTLSVIDT-TS--NTVAG--------------TVKTGKSPLGLALSP 125 (391)
T ss_dssp TEEEEEEECSSSEEEEEECTTSS-EEEEEETTTTEEEEEET-TT--TEEEE--------------EEECSSSEEEEEECT
T ss_pred CeEEEEEECCCCccceEECCCCC-EEEEEECCCCEEEEEEC-CC--CeEEE--------------EEeCCCCcceEEECC
Confidence 334444443334 6899999995 7888875 599999874 22 22211 112234678999998
Q ss_pred CCCcCCeEEEE
Q 005419 279 NFQQNGRFFVS 289 (697)
Q Consensus 279 dF~~NG~~Yvs 289 (697)
+ ..++|+.
T Consensus 126 d---g~~l~~~ 133 (391)
T 1l0q_A 126 D---GKKLYVT 133 (391)
T ss_dssp T---SSEEEEE
T ss_pred C---CCEEEEE
Confidence 4 3457665
No 86
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.17 E-value=1.8 Score=47.55 Aligned_cols=40 Identities=5% Similarity=0.114 Sum_probs=31.1
Q ss_pred CCCCeEEEeccccceeeeecCCCCCeEEEEEcCCCCceeeEEecc
Q 005419 446 QLQPEIWALGFRNPWRCSFDAERPSYFLCADVGQDEYEEVDIVTK 490 (697)
Q Consensus 446 ~~~pEI~A~GlRNP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~k 490 (697)
+...|++|-||.+||.++|+|. | +||++|... ..|.+|..
T Consensus 16 gf~~~~~a~~l~~P~~~a~~pd-G-~l~V~e~~g---g~I~~~~~ 55 (454)
T 1cru_A 16 NFDKKVILSNLNKPHALLWGPD-N-QIWLTERAT---GKILRVNP 55 (454)
T ss_dssp TSCEEEEECCCSSEEEEEECTT-S-CEEEEETTT---CEEEEECT
T ss_pred CeEEEEEECCCCCceEEEEcCC-C-cEEEEEcCC---CEEEEEEC
Confidence 4567999999999999999997 4 699998643 24666653
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.48 E-value=11 Score=38.79 Aligned_cols=67 Identities=10% Similarity=0.180 Sum_probs=40.1
Q ss_pred EEEEEecCce-eeEEECCCCCceEEEEec--------CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceee
Q 005419 203 CLEKVGTGAY-LNMVPHPDGSNRVFLSNQ--------DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMG 273 (697)
Q Consensus 203 ~le~va~Gl~-~~m~~~pDGs~RlfV~Eq--------~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLG 273 (697)
.+..+..+-. ..|++.|||. +++++.. +|.|+++++ .. ++.+. .+ .......+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~-~~--~~~~~------------~~--~~~~~~~~ 307 (433)
T 3bws_A 246 EIRKTDKIGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSM-DK--EKLID------------TI--GPPGNKRH 307 (433)
T ss_dssp EEEECCCCSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEET-TT--TEEEE------------EE--EEEECEEE
T ss_pred EEEEecCCCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEEC-CC--CcEEe------------ec--cCCCCcce
Confidence 3444433333 7899999995 7888873 789999874 22 22211 11 11235678
Q ss_pred eEeCCCCCcCCeEEEEE
Q 005419 274 IAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 274 iAfhPdF~~NG~~YvsY 290 (697)
++|+|+ ..++|+.-
T Consensus 308 ~~~~~~---g~~l~~~~ 321 (433)
T 3bws_A 308 IVSGNT---ENKIYVSD 321 (433)
T ss_dssp EEECSS---TTEEEEEE
T ss_pred EEECCC---CCEEEEEe
Confidence 999983 33677754
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.45 E-value=2.3 Score=43.12 Aligned_cols=63 Identities=17% Similarity=0.239 Sum_probs=37.6
Q ss_pred eeEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|+++|||. ++||+. ..+.|+++++. .+. ++. ...+ ........+..+|+|+|| ..++|++-
T Consensus 214 ~~~~~spdg~-~l~v~~~~~~~v~v~~~~-~g~---~~~-----~~~~--~~~~~~~~~~~~i~~spd---g~~l~v~~ 277 (361)
T 3scy_A 214 RHLIFNSDGK-FAYLINEIGGTVIAFRYA-DGM---LDE-----IQTV--AADTVNAQGSGDIHLSPD---GKYLYASN 277 (361)
T ss_dssp EEEEECTTSS-EEEEEETTTCEEEEEEEE-TTE---EEE-----EEEE--ESCSSCCCCEEEEEECTT---SSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCCeEEEEEec-CCc---eEE-----eEEE--ecCCCCCCCcccEEECCC---CCEEEEEC
Confidence 6899999995 688888 47999988753 221 110 0000 001122345679999984 23466653
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.39 E-value=8.9 Score=37.56 Aligned_cols=59 Identities=15% Similarity=0.245 Sum_probs=36.6
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..++++|||. ++|++.. .|.|+++++. ++. ..+. ...........+++|+|+ ..++|+.
T Consensus 87 ~~~~~s~dg~-~l~~~~~~~~~i~~~d~~-~~~--~~~~-----------~~~~~~~~~~~~~~~s~d---g~~l~~~ 146 (343)
T 1ri6_A 87 THISTDHQGQ-FVFVGSYNAGNVSVTRLE-DGL--PVGV-----------VDVVEGLDGCHSANISPD---NRTLWVP 146 (343)
T ss_dssp SEEEECTTSS-EEEEEETTTTEEEEEEEE-TTE--EEEE-----------EEEECCCTTBCCCEECTT---SSEEEEE
T ss_pred cEEEEcCCCC-EEEEEecCCCeEEEEECC-CCc--cccc-----------cccccCCCCceEEEECCC---CCEEEEe
Confidence 7899999995 6888876 7889988753 221 1110 001123345788999984 2357664
No 90
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.79 E-value=1 Score=45.92 Aligned_cols=64 Identities=9% Similarity=0.122 Sum_probs=36.4
Q ss_pred eeEEECCCCCceEEEEecCc--eEEEEecCCCCC--CCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDG--KTWLATVPEPGS--GSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFV 288 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G--~V~~~~~p~~gs--g~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yv 288 (697)
-+|++.|++ +|+|++.+.. .||.++ |. ...+.+ ++.........-+.+-++++|| .+|.+||
T Consensus 124 EGLA~d~~~-~~L~va~E~~p~~i~~~~----g~~~~~~l~i------~~~~~~~~~~~~~d~S~l~~dp---~tg~lli 189 (255)
T 3qqz_A 124 EGLAYSRQD-HTFWFFKEKNPIEVYKVN----GLLSSNELHI------SKDKALQRQFTLDDVSGAEFNQ---QKNTLLV 189 (255)
T ss_dssp EEEEEETTT-TEEEEEEESSSEEEEEEE----STTCSSCCEE------EECHHHHHTCCSSCCCEEEEET---TTTEEEE
T ss_pred ceEEEeCCC-CEEEEEECcCCceEEEEc----ccccCCceee------ecchhhccccccCCceeEEEcC---CCCeEEE
Confidence 578999987 4899998754 455543 21 001111 1110000001235688999998 5899999
Q ss_pred EE
Q 005419 289 SF 290 (697)
Q Consensus 289 sY 290 (697)
.-
T Consensus 190 LS 191 (255)
T 3qqz_A 190 LS 191 (255)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 91
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=90.76 E-value=9.1 Score=42.46 Aligned_cols=60 Identities=10% Similarity=0.167 Sum_probs=36.8
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. +++|+.+ .|+|++++..+ + +.++ + ........+.+++|+|+ ..+||+.-.
T Consensus 283 ~~i~~s~~~~-~~~vs~~~~g~i~vvd~~~-~--~~l~---------~---~~i~~~~~~~~~~~spd---g~~l~va~~ 343 (543)
T 1nir_A 283 AAIIASHEHP-EFIVNVKETGKVLLVNYKD-I--DNLT---------V---TSIGAAPFLHDGGWDSS---HRYFMTAAN 343 (543)
T ss_dssp EEEEECSSSS-EEEEEETTTTEEEEEECTT-S--SSCE---------E---EEEECCSSCCCEEECTT---SCEEEEEEG
T ss_pred EEEEECCCCC-EEEEEECCCCeEEEEEecC-C--Ccce---------e---EEeccCcCccCceECCC---CCEEEEEec
Confidence 5788999885 6777765 69999987522 1 1111 0 01123456889999994 335776543
No 92
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.12 E-value=3.6 Score=43.85 Aligned_cols=20 Identities=25% Similarity=0.491 Sum_probs=16.6
Q ss_pred CceeeeEeCCCCCcCCeEEEEEee
Q 005419 269 LGMMGIAFHPNFQQNGRFFVSFNC 292 (697)
Q Consensus 269 ~GLLGiAfhPdF~~NG~~YvsYs~ 292 (697)
.|.-+||+|| +|..||.-+.
T Consensus 137 ~~~nDvavD~----~GnaYVt~s~ 156 (334)
T 2p9w_A 137 FGVVQSAQDR----DGNSYVAFAL 156 (334)
T ss_dssp EEEEEEEECT----TSCEEEEEEE
T ss_pred cCCceeEECC----CCCEEEeCCC
Confidence 4689999997 7999998663
No 93
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.06 E-value=1 Score=51.48 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=47.4
Q ss_pred EEEEecCce-eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccC--CceeeeEeCCC
Q 005419 204 LEKVGTGAY-LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVE--LGMMGIAFHPN 279 (697)
Q Consensus 204 le~va~Gl~-~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e--~GLLGiAfhPd 279 (697)
+..|..|.. -.+.++|||. ++||+.+ ...|.++++.. .+.+ ++. -|+....|...-+ .|.+.+||||
T Consensus 270 ~~~Ipvg~~PhGv~~sPDGk-~v~V~~~~s~~VsVid~~~---~~~~-~~~---~l~~~~~v~~~v~vG~gP~h~aF~~- 340 (595)
T 1fwx_A 270 TRYIPIANNPHGCNMAPDKK-HLCVAGKLSPTVTVLDVTR---FDAV-FYE---NADPRSAVVAEPELGLGPLHTAFDG- 340 (595)
T ss_dssp EEEEEEESSCCCEEECTTSS-EEEEECTTSSBEEEEEGGG---HHHH-HHS---CCCGGGGEEECCBCCSCEEEEEECT-
T ss_pred EEEEecCCCceEEEEcCCCC-EEEEeCCCCCeEEEEECcc---cccc-ccc---ccCcccceEEEcCCCCCcceEEECC-
Confidence 344544544 6799999996 7999997 68999987521 0000 111 1344444443333 6789999998
Q ss_pred CCcCCeEEEEE
Q 005419 280 FQQNGRFFVSF 290 (697)
Q Consensus 280 F~~NG~~YvsY 290 (697)
+|++|++.
T Consensus 341 ---dG~aY~t~ 348 (595)
T 1fwx_A 341 ---RGNAYTSL 348 (595)
T ss_dssp ---TSEEEEEE
T ss_pred ---CCeEEEEE
Confidence 67777764
No 94
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=88.81 E-value=18 Score=38.02 Aligned_cols=26 Identities=19% Similarity=0.285 Sum_probs=19.6
Q ss_pred eeEEECCCCCceEEEEecC---ceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQD---GKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~---G~V~~~~~ 239 (697)
..++++|||. ++..+... ..|+++++
T Consensus 182 ~~~~~Spdg~-~la~~s~~~~~~~i~~~d~ 210 (415)
T 2hqs_A 182 MSPAWSPDGS-KLAYVTFESGRSALVIQTL 210 (415)
T ss_dssp EEEEECTTSS-EEEEEECTTSSCEEEEEET
T ss_pred eeeEEcCCCC-EEEEEEecCCCcEEEEEEC
Confidence 7899999996 56655554 48998875
No 95
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=88.15 E-value=13 Score=38.18 Aligned_cols=31 Identities=10% Similarity=0.013 Sum_probs=23.2
Q ss_pred cceeeeecCCCCCeEEEEEcCCCCceeeEEec
Q 005419 458 NPWRCSFDAERPSYFLCADVGQDEYEEVDIVT 489 (697)
Q Consensus 458 NP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I~ 489 (697)
-|-|+||||.+. +||++-=-|...=||.++.
T Consensus 226 vlNGIA~dp~~~-~lfVTGK~Wp~~~ev~~~~ 256 (262)
T 3nol_A 226 VLNGIAWDKEHH-RLFVTGKLWPKVFEITLTQ 256 (262)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEEE
T ss_pred ceEEEEEcCCCC-EEEEECCCCCceEEEEEec
Confidence 467999999875 8999876666555666654
No 96
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=87.44 E-value=4.7 Score=41.40 Aligned_cols=22 Identities=5% Similarity=0.095 Sum_probs=17.2
Q ss_pred cceeee-ecCCCCCeEEEEEcCCC
Q 005419 458 NPWRCS-FDAERPSYFLCADVGQD 480 (697)
Q Consensus 458 NP~r~s-fDp~~g~~L~~~DvG~d 480 (697)
.|..++ |+|.. ..||+++.+.+
T Consensus 255 ~~~~i~~~spdG-~~l~v~~~~~~ 277 (365)
T 1jof_A 255 YRADVCALTFSG-KYMFASSRANK 277 (365)
T ss_dssp EEEEEEEECTTS-SEEEEEEEESS
T ss_pred ccccEEEECCCC-CEEEEECCCCC
Confidence 578899 99974 47999887664
No 97
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=87.08 E-value=18 Score=37.13 Aligned_cols=60 Identities=13% Similarity=0.224 Sum_probs=36.4
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..+++.|++...+.....+|.|+++++ ..+ +.+. .+.. ...+.....++|+|+ ++.++++
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~-~~~--~~~~------~~~~-----~~~~~~v~~v~~sp~---~~~~la~ 244 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDT-RKP--KPAT------RIDF-----CASDTIPTSVTWHPE---KDDTFAC 244 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCT-TSS--SCBC------BCCC-----TTCCSCEEEEEECTT---STTEEEE
T ss_pred EEEEEccCCCceeeeeccCCceEEEEC-CCC--ceee------eeee-----ccccccccchhhhhc---ccceEEE
Confidence 678999998656666778999998864 222 1110 1111 122345688999984 4555554
No 98
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=87.06 E-value=13 Score=38.46 Aligned_cols=22 Identities=0% Similarity=-0.256 Sum_probs=16.4
Q ss_pred cceeeeecCCCCCeEEEEEcCCC
Q 005419 458 NPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 458 NP~r~sfDp~~g~~L~~~DvG~d 480 (697)
.+-|+|||+++. +||++.=-|.
T Consensus 236 vlNGIA~dp~~~-rlfVTGK~Wp 257 (268)
T 3nok_A 236 VLNGIAVEPGSG-RIFMTGKLWP 257 (268)
T ss_dssp CEEEEEECTTTC-CEEEEETTCS
T ss_pred ceEEEEEcCCCC-EEEEeCCCCC
Confidence 467999999875 7999754333
No 99
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=87.04 E-value=27 Score=35.68 Aligned_cols=25 Identities=12% Similarity=0.126 Sum_probs=20.1
Q ss_pred eeEEECCCCCceEEEEe-c--CceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSN-Q--DGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E-q--~G~V~~~~~ 239 (697)
-+|++.||| ++|++. + .+.|.++++
T Consensus 24 ~Gl~~~~dg--~Lyvstg~~~~s~v~~iD~ 51 (266)
T 2iwa_A 24 QGLVYAEND--TLFESTGLYGRSSVRQVAL 51 (266)
T ss_dssp EEEEECSTT--EEEEEECSTTTCEEEEEET
T ss_pred ccEEEeCCC--eEEEECCCCCCCEEEEEEC
Confidence 578999986 899986 3 578999874
No 100
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=86.97 E-value=25 Score=38.27 Aligned_cols=69 Identities=13% Similarity=0.003 Sum_probs=43.5
Q ss_pred EEEEEecCceeeEEECCCCCceEEEEe----------cCceEEEEecCCCCCCCcccccCCCCccCcccceeecc-----
Q 005419 203 CLEKVGTGAYLNMVPHPDGSNRVFLSN----------QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADV----- 267 (697)
Q Consensus 203 ~le~va~Gl~~~m~~~pDGs~RlfV~E----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~----- 267 (697)
.+.+|..|..-+|+++|||. ++||++ +.+.|.+++. . +++.+ ..+...+
T Consensus 111 vv~~I~vG~~Pgia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~-~--t~~vv------------~~I~v~g~~r~~ 174 (426)
T 3c75_H 111 ILGMTDGGFLPHPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDP-V--TFLPI------------ADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEECSSCEEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECT-T--TCCEE------------EEEEETTCCCCC
T ss_pred EEEEEECCCCCceEECCCCC-EEEEEeccccccccCCCCCEEEEEEC-C--CCcEE------------EEEECCCccccc
Confidence 34555555544899999996 899997 4677888863 2 22221 1222221
Q ss_pred -CCceeeeEeCCCCCcCCeEEEEE
Q 005419 268 -ELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 268 -e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..+..+|+|+|| ..++||+.
T Consensus 175 ~g~~P~~~~~spD---Gk~lyV~n 195 (426)
T 3c75_H 175 VGTYQWMNALTPD---NKNLLFYQ 195 (426)
T ss_dssp BSCCGGGSEECTT---SSEEEEEE
T ss_pred cCCCcceEEEcCC---CCEEEEEe
Confidence 134678999984 45799974
No 101
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=86.93 E-value=18 Score=35.51 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=41.2
Q ss_pred CcEEEEEecCce---eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY---LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
.+.++....|-. ..++++|||. +++.+..+|.|+++++. ++ +.+ ........+...++|+
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~-~~--~~~-------------~~~~~h~~~v~~~~~~ 74 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAY-DG--KFE-------------KTISGHKLGISDVAWS 74 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETT-TC--CEE-------------EEECCCSSCEEEEEEC
T ss_pred CceeEEEEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCC-Cc--ccc-------------hhhccCCCceEEEEEc
Confidence 456665555543 7899999995 67777889999998742 22 111 1222345678999999
Q ss_pred CC
Q 005419 278 PN 279 (697)
Q Consensus 278 Pd 279 (697)
|+
T Consensus 75 ~~ 76 (312)
T 4ery_A 75 SD 76 (312)
T ss_dssp TT
T ss_pred CC
Confidence 84
No 102
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=85.85 E-value=3.2 Score=42.82 Aligned_cols=58 Identities=21% Similarity=0.400 Sum_probs=34.3
Q ss_pred eeEEECCCCCceEEEEe-c------CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCe
Q 005419 213 LNMVPHPDGSNRVFLSN-Q------DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGR 285 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E-q------~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~ 285 (697)
..++|.|||+ ++++- . +|.||++..+. +. .. ..++ ......+.+...++|+| +++
T Consensus 46 ~~v~fSpDG~--~las~s~d~~~~wd~~v~~~~~~~-~~--~~-----~~~~----~~~~~~~~~V~~~~~s~----d~~ 107 (357)
T 4g56_B 46 GAVRYRRDGA--LLLAASSLSSRTWGGSIWVFKDPE-GA--PN-----ESLC----TAGVQTEAGVTDVAWVS----EKG 107 (357)
T ss_dssp EEEEECSSSC--EEEEEECSSSSSCCEEEEEESSCC------C-----GGGC----SEEEECSSCEEEEEEET----TTE
T ss_pred EEEEECCCCC--EEEEEcCCCCccccCeEEEEECCC-CC--cc-----eeEe----cccCCCCCCEEEEEEcC----CCC
Confidence 5789999994 55554 3 68899886432 21 11 0000 11234567899999998 466
Q ss_pred EEE
Q 005419 286 FFV 288 (697)
Q Consensus 286 ~Yv 288 (697)
+.+
T Consensus 108 ~l~ 110 (357)
T 4g56_B 108 ILV 110 (357)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 103
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=85.55 E-value=35 Score=34.94 Aligned_cols=57 Identities=11% Similarity=0.093 Sum_probs=36.8
Q ss_pred eeEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..+++.|||. ++|++. ..|.|+++++ +. ++.+. ......+..+++|+|+ ..++|+.-
T Consensus 215 ~~~~~~~~~~-~l~~~~~~~~~i~~~d~-~~--~~~~~--------------~~~~~~~~~~~~~~~~---g~~l~~~~ 272 (433)
T 3bws_A 215 KILLYDPIRD-LVYCSNWISEDISVIDR-KT--KLEIR--------------KTDKIGLPRGLLLSKD---GKELYIAQ 272 (433)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEET-TT--TEEEE--------------ECCCCSEEEEEEECTT---SSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEecCCCcEEEEEC-CC--CcEEE--------------EecCCCCceEEEEcCC---CCEEEEEE
Confidence 7889999995 688887 6899999874 22 22211 0112345789999984 33566543
No 104
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=85.49 E-value=12 Score=36.76 Aligned_cols=76 Identities=12% Similarity=0.102 Sum_probs=47.2
Q ss_pred EEEecCce---eeEEECCC---CCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 205 EKVGTGAY---LNMVPHPD---GSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 205 e~va~Gl~---~~m~~~pD---Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
+.+.+|-. ..++++|+ +...++++...|.|+++++.. + +.++ -+........+.....++|+|
T Consensus 11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~-~--~~~~--------~~~~~~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS-Q--GEIR--------LLQSYVDADADENFYTCAWTY 79 (366)
T ss_dssp EEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG-G--GCEE--------EEEEEECSCTTCCEEEEEEEE
T ss_pred EEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC-C--cEEE--------eeeeccccCCCCcEEEEEecc
Confidence 34554543 78999985 666788888899999887532 1 1111 010000112346789999999
Q ss_pred CCCcCCeEEEEEe
Q 005419 279 NFQQNGRFFVSFN 291 (697)
Q Consensus 279 dF~~NG~~YvsYs 291 (697)
+-..+|.+.++-+
T Consensus 80 ~~~~~~~~l~~~~ 92 (366)
T 3k26_A 80 DSNTSHPLLAVAG 92 (366)
T ss_dssp CTTTCCEEEEEEE
T ss_pred CCCCCCCEEEEec
Confidence 8877677666543
No 105
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=85.07 E-value=33 Score=34.23 Aligned_cols=31 Identities=10% Similarity=0.152 Sum_probs=23.0
Q ss_pred CCceeeEEEcCCCcEEEEecC------------eEEEEecCCC
Q 005419 612 LGFITSFGQDNRKDIYLLASN------------GVYRVVRPSR 642 (697)
Q Consensus 612 ~grI~sf~ed~dGeLYvlts~------------gIYRIv~ps~ 642 (697)
+..+.++...++|.+||.+.+ .+++|.+...
T Consensus 212 l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp CSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB
T ss_pred ccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC
Confidence 346888999999999999842 2888765443
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.93 E-value=9.2 Score=37.65 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=21.2
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~ 239 (697)
..+++.|||. ++|++.. .|.|+++++
T Consensus 46 ~~~~~s~dg~-~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 46 GTAMMAPDNR-TAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CEEEECTTSS-EEEEEETTTTEEEEEET
T ss_pred ceeEECCCCC-EEEEEeCCCCcEEEEeC
Confidence 6889999994 6888874 789999874
No 107
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=84.65 E-value=9.7 Score=38.45 Aligned_cols=58 Identities=19% Similarity=0.264 Sum_probs=36.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. .++.+..+|.|+++++.. + +.+ .....-......++|+| +|.+.++-+
T Consensus 210 ~~l~~spd~~-~l~s~s~dg~i~iwd~~~-~--~~~-------------~~~~~h~~~v~~~~~sp----~~~~l~s~s 267 (321)
T 3ow8_A 210 RSLTFSPDSQ-LLVTASDDGYIKIYDVQH-A--NLA-------------GTLSGHASWVLNVAFCP----DDTHFVSSS 267 (321)
T ss_dssp CEEEECTTSC-EEEEECTTSCEEEEETTT-C--CEE-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCeEEEEECCC-c--cee-------------EEEcCCCCceEEEEECC----CCCEEEEEe
Confidence 6899999984 566677899999987521 1 111 11122344578999998 455555443
No 108
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=84.61 E-value=18 Score=38.44 Aligned_cols=69 Identities=19% Similarity=0.237 Sum_probs=47.2
Q ss_pred EEEEEecCce--eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 203 CLEKVGTGAY--LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 203 ~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
.+++++.++. =+++++|||+ ++||+|. .++||++++.++|+ +. .. ++. .-....=||++|+
T Consensus 212 ~~~~~~~~l~~pNGia~spDg~-~lYvadt~~~~I~~~~~~~~g~---l~--~~--------~~~-~~~g~PDGi~vD~- 275 (355)
T 3sre_A 212 DVRVVAEGFDFANGINISPDGK-YVYIAELLAHKIHVYEKHANWT---LT--PL--------RVL-SFDTLVDNISVDP- 275 (355)
T ss_dssp CCEEEEEEESSEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSC---EE--EE--------EEE-ECSSEEEEEEECT-
T ss_pred eEEEeecCCcccCcceECCCCC-EEEEEeCCCCeEEEEEECCCCc---Ee--cC--------EEE-eCCCCCceEEEeC-
Confidence 4567788876 6899999996 7999996 68999988743332 21 11 121 1134567899995
Q ss_pred CCcCCeEEEE
Q 005419 280 FQQNGRFFVS 289 (697)
Q Consensus 280 F~~NG~~Yvs 289 (697)
++|.+||.
T Consensus 276 --e~G~lwva 283 (355)
T 3sre_A 276 --VTGDLWVG 283 (355)
T ss_dssp --TTCCEEEE
T ss_pred --CCCcEEEE
Confidence 25999994
No 109
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=84.22 E-value=16 Score=36.79 Aligned_cols=69 Identities=20% Similarity=0.311 Sum_probs=41.9
Q ss_pred CcEEEEEecCce--eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 201 GLCLEKVGTGAY--LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 201 G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
|-++..+..+-. +.+++.|||. .++.....|.|+++++.. + +.+ ........-...++|+|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~-~--~~~-------------~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 112 GKQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVES-G--KKE-------------YSLDTRGKFILSIAYSP 174 (321)
T ss_dssp TEEEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTT-C--SEE-------------EEEECSSSCEEEEEECT
T ss_pred CCEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCC-C--cee-------------EEecCCCceEEEEEECC
Confidence 445555554333 6899999995 677777899999987522 2 111 01112233468899998
Q ss_pred CCCcCCeEEEEE
Q 005419 279 NFQQNGRFFVSF 290 (697)
Q Consensus 279 dF~~NG~~YvsY 290 (697)
+|.+.++-
T Consensus 175 ----dg~~lasg 182 (321)
T 3ow8_A 175 ----DGKYLASG 182 (321)
T ss_dssp ----TSSEEEEE
T ss_pred ----CCCEEEEE
Confidence 45555543
No 110
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=83.49 E-value=14 Score=39.60 Aligned_cols=56 Identities=25% Similarity=0.344 Sum_probs=37.0
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|+++|||. +|..+..+|.|++++. ++ +.+ .....-+.....|||+| +|++.++-
T Consensus 20 ~~~a~spdg~-~las~~~d~~v~iWd~--~~--~~~-------------~~l~gh~~~V~~l~fsp----dg~~las~ 75 (577)
T 2ymu_A 20 RGVAFSPDGQ-TIASASDDKTVKLWNR--NG--QLL-------------QTLTGHSSSVWGVAFSP----DGQTIASA 75 (577)
T ss_dssp EEEEECTTSS-CEEEEETTSEEEEECT--TS--CEE-------------EEEECCSSCEEEEEECT----TSSEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEEC--CC--CEE-------------EEEeCCCCCEEEEEECC----CCCEEEEE
Confidence 6899999995 5666778899998862 22 222 11223356688999998 46655543
No 111
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=83.43 E-value=17 Score=36.66 Aligned_cols=58 Identities=26% Similarity=0.298 Sum_probs=36.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. .++.+..+|.|+++++.. + +.+ ......+.....++|+| +|..+++-+
T Consensus 188 ~~~~~~~~~~-~l~sg~~d~~v~~wd~~~-~--~~~-------------~~~~~h~~~v~~v~~~p----~~~~l~s~s 245 (340)
T 1got_B 188 MSLSLAPDTR-LFVSGACDASAKLWDVRE-G--MCR-------------QTFTGHESDINAICFFP----NGNAFATGS 245 (340)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTT-C--SEE-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECCC-C--eeE-------------EEEcCCcCCEEEEEEcC----CCCEEEEEc
Confidence 6889999984 455556799999987522 2 111 11122345678999999 466555543
No 112
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=83.41 E-value=3.6 Score=44.53 Aligned_cols=57 Identities=12% Similarity=0.213 Sum_probs=35.8
Q ss_pred eeEEECCCCCceEEEEec-----CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEE
Q 005419 213 LNMVPHPDGSNRVFLSNQ-----DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFF 287 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-----~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Y 287 (697)
+..++.|||. |+||++. .+.|++++. + +++.+ ..+..+.. . +|+++|| ..++|
T Consensus 36 ~~~~~~pd~~-~vyV~~~~~~~~~~~V~ViD~-~--t~~v~------------~~I~vG~~--P-~va~spD---G~~ly 93 (386)
T 3sjl_D 36 ILEAPAPDAR-RVYVNDPAHFAAVTQQFVIDG-E--AGRVI------------GMIDGGFL--P-NPVVADD---GSFIA 93 (386)
T ss_dssp BCCCCCCCTT-EEEEEECGGGCSSEEEEEEET-T--TTEEE------------EEEEECSS--C-EEEECTT---SSCEE
T ss_pred eeeccCCCCC-EEEEEcCcccCCCCEEEEEEC-C--CCeEE------------EEEECCCC--C-cEEECCC---CCEEE
Confidence 3445679984 9999997 589999863 2 22221 13333322 3 5999994 34699
Q ss_pred EEEe
Q 005419 288 VSFN 291 (697)
Q Consensus 288 vsYs 291 (697)
|.-+
T Consensus 94 Van~ 97 (386)
T 3sjl_D 94 HAST 97 (386)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 9754
No 113
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=83.29 E-value=13 Score=37.72 Aligned_cols=61 Identities=18% Similarity=0.325 Sum_probs=36.8
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. .+..+..+|.|+++++.. +. ..+ .+ .+..........++|+|+ +.+.++-+
T Consensus 109 ~~v~~sp~~~-~l~s~s~D~~v~iwd~~~-~~--~~~------~~----~~~~~h~~~v~~~~~~p~----~~~l~s~s 169 (345)
T 3fm0_A 109 KSVAWAPSGN-LLATCSRDKSVWVWEVDE-ED--EYE------CV----SVLNSHTQDVKHVVWHPS----QELLASAS 169 (345)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEECT-TS--CEE------EE----EEECCCCSCEEEEEECSS----SSCEEEEE
T ss_pred eEEEEeCCCC-EEEEEECCCeEEEEECCC-CC--CeE------EE----EEecCcCCCeEEEEECCC----CCEEEEEe
Confidence 6899999985 566677899999987632 11 100 00 111223445788999984 54444433
No 114
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=82.99 E-value=39 Score=34.14 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=21.1
Q ss_pred cceeeeecCCCCCeEEEEEcCCCCceeeEEe
Q 005419 458 NPWRCSFDAERPSYFLCADVGQDEYEEVDIV 488 (697)
Q Consensus 458 NP~r~sfDp~~g~~L~~~DvG~d~~EEIn~I 488 (697)
-|-|+||||.+. +||++-=-|...=||.++
T Consensus 205 vlNGIA~d~~~~-~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 205 VLNGIAFDAEHD-RLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEC
T ss_pred ceEEEEEcCCCC-EEEEECCCCCcEEEEEEe
Confidence 467999999875 899986555444455554
No 115
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=81.72 E-value=13 Score=38.36 Aligned_cols=26 Identities=27% Similarity=0.336 Sum_probs=21.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|||. .+..+..+|.|+++++
T Consensus 253 ~~v~~~p~~~-~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 253 NSVKFFPDGQ-RFGTGSDDGTCRLFDM 278 (380)
T ss_dssp CEEEECTTSS-EEEEECSSSCEEEEET
T ss_pred EEEEEecCCC-eEEEEcCCCeEEEEEC
Confidence 6789999995 5666678999999875
No 116
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=81.43 E-value=39 Score=32.75 Aligned_cols=26 Identities=12% Similarity=0.042 Sum_probs=15.8
Q ss_pred ceeeEEEcCCCc-EEEEecCeEEEEec
Q 005419 614 FITSFGQDNRKD-IYLLASNGVYRVVR 639 (697)
Q Consensus 614 rI~sf~ed~dGe-LYvlts~gIYRIv~ 639 (697)
.+.++..++||. ||+....+-.+|.+
T Consensus 281 ~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 281 SYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp CCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred ceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 466788899987 55554334333444
No 117
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=81.34 E-value=10 Score=37.27 Aligned_cols=57 Identities=9% Similarity=0.070 Sum_probs=32.9
Q ss_pred eEEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 214 NMVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 214 ~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
++++.+++ ++||+. ..|.|+++++ +. ++.++ .+......+..+++|+|+ ..++|++-
T Consensus 4 g~~~~~~~--~~~v~~~~~~~v~~~d~-~~--~~~~~------------~~~~~~~~~~~~~~~s~d---g~~~~v~~ 61 (349)
T 1jmx_B 4 GPALKAGH--EYMIVTNYPNNLHVVDV-AS--DTVYK------------SCVMPDKFGPGTAMMAPD---NRTAYVLN 61 (349)
T ss_dssp CCCCCTTC--EEEEEEETTTEEEEEET-TT--TEEEE------------EEECSSCCSSCEEEECTT---SSEEEEEE
T ss_pred cccccCCC--EEEEEeCCCCeEEEEEC-CC--CcEEE------------EEecCCCCCCceeEECCC---CCEEEEEe
Confidence 45566666 688877 4799999874 22 22211 111122225778999983 23577753
No 118
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=80.53 E-value=35 Score=33.12 Aligned_cols=26 Identities=8% Similarity=0.101 Sum_probs=21.1
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~ 239 (697)
..+++.|||. ++||+.. .|.|+++++
T Consensus 37 ~~~~~s~dg~-~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 37 MVPMVAPGGR-IAYATVNKSESLVKIDL 63 (337)
T ss_dssp CCEEECTTSS-EEEEEETTTTEEEEEET
T ss_pred cceEEcCCCC-EEEEEeCCCCeEEEEEC
Confidence 6789999995 6888775 689999874
No 119
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=80.40 E-value=20 Score=38.34 Aligned_cols=55 Identities=24% Similarity=0.354 Sum_probs=35.0
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..|+++|||. .|..+..+|.|++++. ++ +.++ ...........++|+| +|++.++
T Consensus 471 ~~~~~spd~~-~las~~~d~~i~iw~~--~~--~~~~-------------~~~~h~~~v~~l~~s~----dg~~l~s 525 (577)
T 2ymu_A 471 RGVAFSPDGQ-TIASASDDKTVKLWNR--NG--QLLQ-------------TLTGHSSSVRGVAFSP----DGQTIAS 525 (577)
T ss_dssp EEEEECTTSC-EEEEEETTSEEEEEET--TS--CEEE-------------EEECCSSCEEEEEECT----TSSCEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEcC--CC--CEEE-------------EEeCCCCCEEEEEEcC----CCCEEEE
Confidence 6799999995 5666678999998863 22 2221 1122345678999998 4554443
No 120
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=80.29 E-value=21 Score=35.34 Aligned_cols=26 Identities=19% Similarity=0.155 Sum_probs=22.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++|+|||. +++.+..+|.|+++++
T Consensus 17 ~~~~fsp~~~-~l~s~~~dg~v~lWd~ 42 (304)
T 2ynn_A 17 KGIDFHPTEP-WVLTTLYSGRVELWNY 42 (304)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEET
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEEC
Confidence 6899999995 6777778999999875
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=79.90 E-value=27 Score=33.51 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=38.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|+++|||. .|+.+..+|.|+++++.. +... .+ + .............++|+|. .++.+.++-
T Consensus 15 ~~~~~~~~~~-~l~~~~~dg~i~iw~~~~-~~~~-~~---------~-~~~~~~~~~~v~~~~~~~~--~d~~~l~s~ 77 (351)
T 3f3f_A 15 HDVVYDFYGR-HVATCSSDQHIKVFKLDK-DTSN-WE---------L-SDSWRAHDSSIVAIDWASP--EYGRIIASA 77 (351)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEEECS-SSCC-EE---------E-EEEEECCSSCEEEEEECCG--GGCSEEEEE
T ss_pred eEEEEcCCCC-EEEEeeCCCeEEEEECCC-CCCc-ce---------e-cceeccCCCcEEEEEEcCC--CCCCEEEEE
Confidence 6899999985 677777899999987632 2110 00 0 0112234567899999983 235554443
No 122
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=79.88 E-value=32 Score=34.25 Aligned_cols=49 Identities=20% Similarity=0.389 Sum_probs=32.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++++|||. .+..+..+|.|+++++. +++.+. ....+.....++|+|+
T Consensus 200 ~~~~~sp~g~-~l~s~~~dg~i~iwd~~---~~~~~~--------------~~~~~~~v~~~~~sp~ 248 (319)
T 3frx_A 200 NTLTASPDGT-LIASAGKDGEIMLWNLA---AKKAMY--------------TLSAQDEVFSLAFSPN 248 (319)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEETT---TTEEEE--------------EEECCSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECC---CCcEEE--------------EecCCCcEEEEEEcCC
Confidence 6899999995 56666789999998752 122211 1122345789999994
No 123
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=79.59 E-value=41 Score=34.49 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=39.8
Q ss_pred CcEEEEEecCce-eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 201 GLCLEKVGTGAY-LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 201 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
+-++.++...-. ..++|.|||. ++++--.+.+.++.. ..+ +.+. ..+.......+..++|+|
T Consensus 167 ~~~~~~~~~~~~V~~v~fspdg~--~l~s~s~~~~~~~~~-~~~--~~~~-----------~~~~~~~~~~v~~v~fsp- 229 (365)
T 4h5i_A 167 LTEKFEIETRGEVKDLHFSTDGK--VVAYITGSSLEVIST-VTG--SCIA-----------RKTDFDKNWSLSKINFIA- 229 (365)
T ss_dssp TEEEEEEECSSCCCEEEECTTSS--EEEEECSSCEEEEET-TTC--CEEE-----------EECCCCTTEEEEEEEEEE-
T ss_pred CcEEEEeCCCCceEEEEEccCCc--eEEeccceeEEEEEe-ccC--ccee-----------eeecCCCCCCEEEEEEcC-
Confidence 444445443333 7899999994 555555566666553 222 1110 001111223467899998
Q ss_pred CCcCCeEEEEEeec
Q 005419 280 FQQNGRFFVSFNCD 293 (697)
Q Consensus 280 F~~NG~~YvsYs~~ 293 (697)
+|.+.++-+.+
T Consensus 230 ---dg~~l~~~s~d 240 (365)
T 4h5i_A 230 ---DDTVLIAASLK 240 (365)
T ss_dssp ---TTEEEEEEEES
T ss_pred ---CCCEEEEEecC
Confidence 67777766644
No 124
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=79.06 E-value=34 Score=37.71 Aligned_cols=26 Identities=23% Similarity=0.144 Sum_probs=18.9
Q ss_pred eeEEECCCCCceEEEEecC--------ceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQD--------GKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~--------G~V~~~~~ 239 (697)
...+++|||. +|+++... ..||++++
T Consensus 191 ~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 191 TGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARV 224 (662)
T ss_dssp CCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEE
T ss_pred cCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEE
Confidence 6788999996 56655533 47999875
No 125
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=79.04 E-value=43 Score=33.57 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=21.6
Q ss_pred eeEEECCCCCceEEEEecC---ceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQD---GKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~---G~V~~~~~ 239 (697)
..|++.|||. .++++..+ |.|+++++
T Consensus 237 ~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 237 RSVKFSPQGS-LLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp EEEEECSSTT-EEEEEEEETTEEEEEEEET
T ss_pred ceEEECCCCC-EEEEEecCCCCceEEEEEC
Confidence 7899999985 57777778 99999975
No 126
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=78.99 E-value=20 Score=36.83 Aligned_cols=61 Identities=10% Similarity=0.043 Sum_probs=38.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++|.||+ +++++..+|.|+++++. .+ +.+.+ + .....+-+.....++|+| +|.+.++-+
T Consensus 86 ~~~~~s~d~--~l~~~s~dg~v~lWd~~-~~--~~~~~--------~-~~~~~~H~~~V~~v~~sp----dg~~l~sgs 146 (344)
T 4gqb_B 86 ADLTWVGER--GILVASDSGAVELWELD-EN--ETLIV--------S-KFCKYEHDDIVSTVSVLS----SGTQAVSGS 146 (344)
T ss_dssp EEEEEETTT--EEEEEETTSEEEEEEEC-TT--SSCEE--------E-EEEEECCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEeCCC--eEEEEECCCEEEEEecc-CC--CceeE--------e-eccccCCCCCEEEEEECC----CCCEEEEEe
Confidence 578999997 79999999999998763 22 11110 0 111123345678999998 566555543
No 127
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=78.24 E-value=23 Score=36.22 Aligned_cols=51 Identities=12% Similarity=0.084 Sum_probs=34.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCccccee-eccCCceeeeEeCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVH-ADVELGMMGIAFHP 278 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~-~~~e~GLLGiAfhP 278 (697)
..++++|||.+.++.+..+|.|+++++. .+ +.+. .+. .........++|+|
T Consensus 135 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~--~~~~------------~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 135 GIVAWHPTAQNVLLSAGCDNVILVWDVG-TG--AAVL------------TLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp EEEEECSSBTTEEEEEETTSCEEEEETT-TT--EEEE------------EECTTTCCSCEEEEEECT
T ss_pred EEEEECcCCCCEEEEEcCCCEEEEEECC-CC--CccE------------EEecCCCCCceEEEEECC
Confidence 6899999986567777889999998752 22 2210 010 12345678999998
No 128
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=78.03 E-value=58 Score=32.38 Aligned_cols=23 Identities=13% Similarity=0.193 Sum_probs=14.7
Q ss_pred eeEEECCCCCceEEEEecCceEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLAT 238 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~ 238 (697)
..+++.||| ++||+ ..+.|+.++
T Consensus 40 ~~~~~~pdG--~ilvs-~~~~V~~~d 62 (276)
T 3no2_A 40 NSVAATKAG--EILFS-YSKGAKMIT 62 (276)
T ss_dssp CEEEECTTS--CEEEE-CBSEEEEEC
T ss_pred cCeEECCCC--CEEEe-CCCCEEEEC
Confidence 355667887 57774 456677664
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=77.29 E-value=75 Score=33.27 Aligned_cols=26 Identities=19% Similarity=0.315 Sum_probs=18.6
Q ss_pred eeEEECCCCCceEE-EEecCc--eEEEEec
Q 005419 213 LNMVPHPDGSNRVF-LSNQDG--KTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~Rlf-V~Eq~G--~V~~~~~ 239 (697)
..++|+|||. +|+ ...+.| .||++++
T Consensus 226 ~~~~~spdg~-~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 226 GAPAFSPDGS-KLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp EEEEECTTSS-EEEEEECTTSSCEEEEEET
T ss_pred cCEEEcCCCC-EEEEEEecCCCceEEEEEC
Confidence 7899999996 455 444554 4998874
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=77.16 E-value=48 Score=31.02 Aligned_cols=25 Identities=24% Similarity=0.305 Sum_probs=19.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|||. .++....|.|+++++
T Consensus 45 ~~~~~spdg~--~l~~~~~~~i~~~d~ 69 (297)
T 2ojh_A 45 EAPNWSPDGK--YLLLNSEGLLYRLSL 69 (297)
T ss_dssp EEEEECTTSS--EEEEEETTEEEEEES
T ss_pred EeeEECCCCC--EEEEEcCCeEEEEeC
Confidence 6899999994 445556899999875
No 131
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=77.03 E-value=39 Score=34.06 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=37.0
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. .++.+..+|.|+++++. .+..+.+ .....-+.....++|+| +|.+.++-+
T Consensus 65 ~~~~~sp~g~-~l~s~s~D~~v~iw~~~-~~~~~~~-------------~~~~~h~~~v~~v~~sp----~~~~l~s~s 124 (345)
T 3fm0_A 65 RKVAWSPCGN-YLASASFDATTCIWKKN-QDDFECV-------------TTLEGHENEVKSVAWAP----SGNLLATCS 124 (345)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEEC-CC-EEEE-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEECCCCC-EEEEEECCCcEEEEEcc-CCCeEEE-------------EEccCCCCCceEEEEeC----CCCEEEEEE
Confidence 6789999995 67777789998887642 1211000 11123345678999999 465555443
No 132
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=77.00 E-value=11 Score=41.94 Aligned_cols=39 Identities=18% Similarity=0.335 Sum_probs=23.3
Q ss_pred eeEeCCCCC-eEEEEecCCCCCCCCccccc-cccCCCceEEEEecCC
Q 005419 373 QILFGPEDG-HLYFMVGDGEGRGDPYNFSQ-NKKSLLGKIMRLDVDK 417 (697)
Q Consensus 373 ~L~FGP~DG-~LYis~GDgg~~~DP~~~aQ-n~~sl~GKILRIdvDg 417 (697)
.|.+.| || +||++.+=-.. +. .| -+.+..+.|+++++|.
T Consensus 385 ~~~lSp-DGk~LyVaNsl~~~----wd-~Qfyp~~~~~~~~~~~vd~ 425 (462)
T 2ece_A 385 MLEISR-DGRRVYVTNSLYST----WD-NQFYPEGLKGWMVKLNANP 425 (462)
T ss_dssp CEEECT-TSSEEEEECCCCHH----HH-HHHSTTCCCCEEEEEEECT
T ss_pred EEEEcC-CCCEEEEEcCCccc----cc-ccccCCCCceEEEEEEecC
Confidence 589999 87 79998742110 00 12 1124557799887775
No 133
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=76.70 E-value=38 Score=35.38 Aligned_cols=63 Identities=10% Similarity=0.023 Sum_probs=38.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|++.+.+++....|.|+++++...... .+. ........+...|+|+|+ ..+++++-+
T Consensus 235 ~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~--------~~~-----~~~~~~~~~v~~i~~~p~---~~~~l~tg~ 297 (430)
T 2xyi_A 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS--------KPS-----HTVDAHTAEVNCLSFNPY---SEFILATGS 297 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCSCSS--------SCS-----EEEECCSSCEEEEEECSS---CTTEEEEEE
T ss_pred eeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC--------cce-----eEeecCCCCeEEEEeCCC---CCCEEEEEe
Confidence 678999966544555667999999976321100 111 111234567899999984 334666544
No 134
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=76.68 E-value=33 Score=33.92 Aligned_cols=58 Identities=7% Similarity=0.110 Sum_probs=36.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..|++.|||. .++++..+|.|+++++.. +..+.+ ............++|+| ++.+.++
T Consensus 12 ~~~~~s~~~~-~l~~~~~d~~v~i~~~~~-~~~~~~-------------~~~~~h~~~v~~~~~~~----~~~~l~~ 69 (372)
T 1k8k_C 12 SCHAWNKDRT-QIAICPNNHEVHIYEKSG-NKWVQV-------------HELKEHNGQVTGVDWAP----DSNRIVT 69 (372)
T ss_dssp CEEEECTTSS-EEEEECSSSEEEEEEEET-TEEEEE-------------EEEECCSSCEEEEEEET----TTTEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeCCC-CcEEee-------------eeecCCCCcccEEEEeC----CCCEEEE
Confidence 6889999985 566666899999987522 110011 11123355688999998 4554443
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=76.58 E-value=21 Score=39.69 Aligned_cols=25 Identities=20% Similarity=0.104 Sum_probs=19.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++|+|||+ ++++..+|.|+++++
T Consensus 20 ~~~~~spdg~--~~~~~~dg~i~~~d~ 44 (723)
T 1xfd_A 20 PEAKWISDTE--FIYREQKGTVRLWNV 44 (723)
T ss_dssp CCCCBSSSSC--BCCCCSSSCEEEBCG
T ss_pred cccEEcCCCc--EEEEeCCCCEEEEEC
Confidence 5778999995 555577899999864
No 136
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=76.53 E-value=43 Score=34.20 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=35.3
Q ss_pred eeEEECC-CCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHP-DGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~p-DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..|+++| |+ +.++.+..+|.|++++++..+.... ...+. ............++|||+
T Consensus 85 ~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~----~~~~~-----~~~~~h~~~v~~~~~~p~ 142 (402)
T 2aq5_A 85 LDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLP----LREPV-----ITLEGHTKRVGIVAWHPT 142 (402)
T ss_dssp EEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSC----BCSCS-----EEEECCSSCEEEEEECSS
T ss_pred EEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccc----cCCce-----EEecCCCCeEEEEEECcC
Confidence 6889999 65 4777778899999998643211000 00111 122334567899999984
No 137
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=76.07 E-value=47 Score=33.64 Aligned_cols=27 Identities=7% Similarity=0.128 Sum_probs=23.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|||...++++..+|.|+++++
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 789999999656777888999999975
No 138
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=75.55 E-value=60 Score=31.29 Aligned_cols=54 Identities=9% Similarity=0.106 Sum_probs=32.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..|++.|||. .++.+. +|.|+++++.. +. . ..++..+ .....+.....++|+|+
T Consensus 55 ~~~~~~~~~~-~l~~~~-dg~i~iw~~~~-~~--~-----~~~~~~~---~~~~~~~~v~~~~~~~~ 108 (337)
T 1gxr_A 55 CAVTISNPTR-HVYTGG-KGCVKVWDISH-PG--N-----KSPVSQL---DCLNRDNYIRSCKLLPD 108 (337)
T ss_dssp CEEEECSSSS-EEEEEC-BSEEEEEETTS-TT--C-----CSCSEEE---ECSCTTSBEEEEEECTT
T ss_pred EEEEEecCCc-EEEEcC-CCeEEEEECCC-CC--c-----eeeeecc---cccCCCCcEEEEEEcCC
Confidence 7899999994 455554 99999987632 21 1 1111110 00134566889999983
No 139
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=75.49 E-value=34 Score=34.30 Aligned_cols=65 Identities=15% Similarity=0.224 Sum_probs=34.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. .+..+..+|.|+++++.. ...... . ... ..+...-+.....++|+| +|.+.++-+
T Consensus 62 ~~v~~sp~~~-~las~s~D~~v~iw~~~~-~~~~~~----~---~~~-~~~~~~h~~~V~~v~~sp----~g~~las~s 126 (330)
T 2hes_X 62 RSVAWRPHTS-LLAAGSFDSTVSIWAKEE-SADRTF----E---MDL-LAIIEGHENEVKGVAWSN----DGYYLATCS 126 (330)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEC--------C----C---CEE-EEEEC----CEEEEEECT----TSCEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEEccc-CcCccc----c---cee-EEEEcCCCCcEEEEEECC----CCCEEEEEe
Confidence 6899999985 566777899999987421 100000 0 000 011223345688999999 466555433
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=75.42 E-value=12 Score=40.95 Aligned_cols=26 Identities=8% Similarity=-0.010 Sum_probs=17.9
Q ss_pred eeEEECCCCCceEEEEecC----ceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQD----GKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~----G~V~~~~~ 239 (697)
+..+++|||. +++.+... +.||++++
T Consensus 153 ~~~~~spDG~-~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 153 FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp CEEEEEEETT-EEEEEEEEETTEEEEEEEET
T ss_pred ceEEECCCCC-EEEEEEEcCCCCeEEEEEcC
Confidence 6788999995 44434433 67888864
No 141
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=75.40 E-value=22 Score=36.46 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=37.8
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. +|+.+..+|.|+++++. . ++.++ ....-......++|+|+ +..++++-+
T Consensus 131 ~~v~~spdg~-~l~sgs~d~~i~iwd~~-~--~~~~~-------------~~~~h~~~V~~~~~~~~---~~~~l~s~s 189 (344)
T 4gqb_B 131 STVSVLSSGT-QAVSGSKDICIKVWDLA-Q--QVVLS-------------SYRAHAAQVTCVAASPH---KDSVFLSCS 189 (344)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-T--TEEEE-------------EECCCSSCEEEEEECSS---CTTEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECC-C--CcEEE-------------EEcCcCCceEEEEecCC---CCCceeeec
Confidence 6899999995 67777789999998752 2 22221 11223455788999984 234666544
No 142
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=75.36 E-value=29 Score=35.36 Aligned_cols=59 Identities=10% Similarity=0.140 Sum_probs=37.4
Q ss_pred eeEEECCCCCceEEEEecCce-EEEEecCCCCCCCcccccCCCCccCcccceeec-cCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGK-TWLATVPEPGSGSKLELDESNPFLDLTDQVHAD-VELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~-V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~-~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..++++|||. .+..+..+|. |+++++. . ++.+. .+..+ .......++|+| +|.+.++-
T Consensus 199 ~~~~~s~~g~-~l~s~s~d~~~v~iwd~~-~--~~~~~------------~~~~g~h~~~v~~~~~s~----~~~~l~s~ 258 (355)
T 3vu4_A 199 KMVRLNRKSD-MVATCSQDGTIIRVFKTE-D--GVLVR------------EFRRGLDRADVVDMKWST----DGSKLAVV 258 (355)
T ss_dssp EEEEECTTSS-EEEEEETTCSEEEEEETT-T--CCEEE------------EEECTTCCSCEEEEEECT----TSCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCCEEEEEECC-C--CcEEE------------EEEcCCCCCcEEEEEECC----CCCEEEEE
Confidence 7899999995 5666678997 9998752 2 22221 11111 345688999999 46555554
Q ss_pred e
Q 005419 291 N 291 (697)
Q Consensus 291 s 291 (697)
+
T Consensus 259 s 259 (355)
T 3vu4_A 259 S 259 (355)
T ss_dssp E
T ss_pred E
Confidence 4
No 143
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=75.25 E-value=25 Score=36.72 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=36.8
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|+|+|...+-|.+...+|.|+++++. .+.... ++. ..+-.....+|+|+| .++.+.++-
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~-~~~~~~--------~~~-----~~gH~~~V~~l~f~p---~~~~~l~s~ 183 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFG-IKDKPT--------FIK-----GIGAGGSITGLKFNP---LNTNQFYAS 183 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSS-CCSCCE--------EEC-----CCSSSCCCCEEEECS---SCTTEEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECC-CCCcee--------EEE-----ccCCCCCEEEEEEeC---CCCCEEEEE
Confidence 6899999655456677789999998652 222111 111 012245678999998 355554443
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=75.16 E-value=57 Score=36.16 Aligned_cols=16 Identities=19% Similarity=0.152 Sum_probs=12.1
Q ss_pred eeEEECCCCCceEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSN 229 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E 229 (697)
..++++|||. +|+++.
T Consensus 184 ~~~~~SpDg~-~la~~~ 199 (706)
T 2z3z_A 184 KGTFWSPKGS-CLAFYR 199 (706)
T ss_dssp CSEEECTTSS-EEEEEE
T ss_pred ceEEECCCCC-EEEEEE
Confidence 5789999996 566664
No 145
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=75.02 E-value=8.5 Score=42.40 Aligned_cols=73 Identities=15% Similarity=0.096 Sum_probs=50.0
Q ss_pred eeEEECCCCCceEEEEe--c----------------CceEEEEecCCCCCC--CcccccCCCCccCc---ccceeeccCC
Q 005419 213 LNMVPHPDGSNRVFLSN--Q----------------DGKTWLATVPEPGSG--SKLELDESNPFLDL---TDQVHADVEL 269 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E--q----------------~G~V~~~~~p~~gsg--~~l~~~~~~pflDl---~~~V~~~~e~ 269 (697)
-.|+|.||| .|||+- . .|+|+.++ |+ |+. ..-.|....||.+- .++|++.+-|
T Consensus 142 ~~l~fgpDG--~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~-~d-g~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R 217 (463)
T 2wg3_C 142 GQLLFGPDG--FLYIILGDGMITLDDMEEMDGLSDFTGSVLRLD-VD-TDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH 217 (463)
T ss_dssp EEEEECTTS--CEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEB-CC-CCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS
T ss_pred CcEeECCCC--cEEEEeCCCCCCCCccccccCcCCCCeeEEEEE-CC-CCcccccCcCCCCCCCcCCCCCcccEEEECCC
Confidence 579999999 699983 1 58899886 43 321 11123456788874 4689999999
Q ss_pred ceeeeEeCCCCC-cCCeEEEE
Q 005419 270 GMMGIAFHPNFQ-QNGRFFVS 289 (697)
Q Consensus 270 GLLGiAfhPdF~-~NG~~Yvs 289 (697)
-..||||||.=. -||.++++
T Consensus 218 Np~gla~dp~tg~~~G~l~~~ 238 (463)
T 2wg3_C 218 DPGRCAVDRHPTDININLTIL 238 (463)
T ss_dssp SCCBEEEESSCSSTTCSEEEE
T ss_pred CcceEEECCCCCCcccceEEE
Confidence 999999999432 14655554
No 146
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=74.74 E-value=1.1e+02 Score=34.98 Aligned_cols=72 Identities=11% Similarity=0.132 Sum_probs=43.6
Q ss_pred eeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCCCCCeEE
Q 005419 373 QILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQLQPEIW 452 (697)
Q Consensus 373 ~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 452 (697)
.|.|++ +|.|||.+= ++...+ ..-.......|+|++++.. ....+
T Consensus 480 nL~fd~-~G~LWf~TD-~~~~~~----g~~~~~gnn~v~~~dp~tG-----------------------------el~~f 524 (592)
T 4a9v_A 480 GLGFDK-AGRLWILTD-GDSSNA----GDFAGMGNNQMLCADPATG-----------------------------EIRRF 524 (592)
T ss_dssp EEEECT-TCCEEEEEC-CCCCCS----GGGTTCCSCEEEEECTTTC-----------------------------CEEEE
T ss_pred ceEECC-CCCEEEEeC-CCcCcc----ccccccCCceEEEEeCCCC-----------------------------eEEEE
Confidence 599999 999999762 211100 1111122337999988541 12345
Q ss_pred Eeccc--cceeeeecCCCCCeEEEEEcCCC
Q 005419 453 ALGFR--NPWRCSFDAERPSYFLCADVGQD 480 (697)
Q Consensus 453 A~GlR--NP~r~sfDp~~g~~L~~~DvG~d 480 (697)
+.|.. -|-|++|.|.. ..||++-+-+.
T Consensus 525 l~~P~~aEpnGiafSPD~-ktLfV~vQHPG 553 (592)
T 4a9v_A 525 MVGPIGCEVTGISFSPDQ-KTLFVGIQHPG 553 (592)
T ss_dssp EECCTTCEEEEEEECTTS-SEEEEEEESTT
T ss_pred EeCCCCccccCCEECCCC-CEEEEEEeCCC
Confidence 54432 36799999975 47999877665
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=74.39 E-value=57 Score=30.50 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=23.3
Q ss_pred cceeeEeCCCCCe-EEEEecCCCCCCCCccccccccCCCceEEEEecCC
Q 005419 370 HGGQILFGPEDGH-LYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDK 417 (697)
Q Consensus 370 ~GG~L~FGP~DG~-LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 417 (697)
....+.|.| ||. |++...|++.... .....+.|..+|.++
T Consensus 218 ~~~~~~~s~-dg~~l~~~~~~~~~~~~-------~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 218 GDWFPHPSP-SGDKVVFVSYDADVFDH-------PRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCCSC-------CSSEEEEEEEEETTS
T ss_pred ccCCeEECC-CCCEEEEEEcCCCCCcc-------cccCceEEEEEecCC
Confidence 344689999 885 5555555432211 112346688888765
No 148
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=74.13 E-value=29 Score=35.07 Aligned_cols=27 Identities=7% Similarity=0.132 Sum_probs=22.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..|++.||+.+.++.+..+|.|+++++
T Consensus 117 ~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 117 KTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 689999995557778888999999875
No 149
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=73.86 E-value=32 Score=35.41 Aligned_cols=58 Identities=16% Similarity=0.326 Sum_probs=38.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..+++.|||. +++.+..+|.|+++++. .+ +.+ .....+.+...++++| .+|.+.++-+
T Consensus 169 ~~~~~~p~~~-~l~s~s~d~~v~iwd~~-~~--~~~--------------~~~~~~~~v~~~~~~~---~~~~~l~~~s 226 (393)
T 1erj_A 169 YSLDYFPSGD-KLVSGSGDRTVRIWDLR-TG--QCS--------------LTLSIEDGVTTVAVSP---GDGKYIAAGS 226 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETT-TT--EEE--------------EEEECSSCEEEEEECS---TTCCEEEEEE
T ss_pred EEEEEcCCCC-EEEEecCCCcEEEEECC-CC--eeE--------------EEEEcCCCcEEEEEEC---CCCCEEEEEc
Confidence 6899999995 67778889999998752 12 111 1122345788899998 3566655543
No 150
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=73.66 E-value=39 Score=32.31 Aligned_cols=49 Identities=22% Similarity=0.255 Sum_probs=33.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.|+| ++++...+|.|+++++.. + +.+ ............++|+|+
T Consensus 188 ~~~~~~~~~--~~~~~~~dg~i~i~d~~~-~--~~~-------------~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 188 RHLAVVDDG--HFISCSNDGLIKLVDMHT-G--DVL-------------RTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp EEEEEEETT--EEEEEETTSEEEEEETTT-C--CEE-------------EEEECCSSCEEEEEECTT
T ss_pred EEEEEcCCC--eEEEccCCCeEEEEECCc-h--hhh-------------hhhhcCCceEEEEEEecC
Confidence 678899998 488888999999987522 2 221 111223456889999984
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=73.63 E-value=1.1e+02 Score=33.67 Aligned_cols=16 Identities=25% Similarity=0.393 Sum_probs=11.7
Q ss_pred eeEEECCCCCceEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSN 229 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E 229 (697)
..++|+|||. +|+++.
T Consensus 176 ~~~~~SpDg~-~la~~~ 191 (723)
T 1xfd_A 176 IAHWWSPDGT-RLAYAA 191 (723)
T ss_dssp EEEEECTTSS-EEEEEE
T ss_pred ceEEECCCCC-EEEEEE
Confidence 4799999996 555554
No 152
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=73.51 E-value=1.2e+02 Score=33.89 Aligned_cols=75 Identities=11% Similarity=-0.008 Sum_probs=46.8
Q ss_pred CcEEEEEecCce-eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 201 GLCLEKVGTGAY-LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 201 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
+-.+.+|..|.. ..++++|||. ++||+.+.|.|.++++. ..+++.+ .++.. ..+..+|+|+|-
T Consensus 187 ~~v~~~i~~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~-~~t~~~v------------~~i~~--G~~P~~ia~s~~ 250 (567)
T 1qks_A 187 YEIKTVLDTGYAVHISRLSASGR-YLFVIGRDGKVNMIDLW-MKEPTTV------------AEIKI--GSEARSIETSKM 250 (567)
T ss_dssp CCEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEETT-SSSCCEE------------EEEEC--CSEEEEEEECCS
T ss_pred CeEEEEEeCCCCccceEECCCCC-EEEEEcCCCeEEEEECC-CCCCcEe------------EEEec--CCCCceeEEccc
Confidence 334556666655 6889999995 79999999999998742 1122111 12322 235689999931
Q ss_pred CC-cCCeEEEEEe
Q 005419 280 FQ-QNGRFFVSFN 291 (697)
Q Consensus 280 F~-~NG~~YvsYs 291 (697)
-. ...++||...
T Consensus 251 ~~pDGk~l~v~n~ 263 (567)
T 1qks_A 251 EGWEDKYAIAGAY 263 (567)
T ss_dssp TTCTTTEEEEEEE
T ss_pred cCCCCCEEEEEEc
Confidence 11 1347888643
No 153
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=73.24 E-value=93 Score=32.47 Aligned_cols=25 Identities=8% Similarity=0.057 Sum_probs=20.8
Q ss_pred eeEEECCCCCceEEEEec--CceEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQ--DGKTWLAT 238 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq--~G~V~~~~ 238 (697)
..|+++|||. ++||+.+ .+.|++++
T Consensus 128 ~~~~~spDG~-~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 128 WMNANTPNNA-DLLFFQFAAGPAVGLVV 154 (373)
T ss_pred cceEECCCCC-EEEEEecCCCCeEEEEE
Confidence 5889999996 8999975 47899885
No 154
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=72.95 E-value=72 Score=31.07 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=33.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
..|+++|||. .++++..+|.|+++++.. + +.+ ............++|+|
T Consensus 36 ~~~~~s~~~~-~l~~~~~dg~i~vwd~~~-~--~~~-------------~~~~~h~~~v~~~~~~~ 84 (369)
T 3zwl_B 36 TQVKYNKEGD-LLFSCSKDSSASVWYSLN-G--ERL-------------GTLDGHTGTIWSIDVDC 84 (369)
T ss_dssp EEEEECTTSC-EEEEEESSSCEEEEETTT-C--CEE-------------EEECCCSSCEEEEEECT
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEeCCC-c--hhh-------------hhhhhcCCcEEEEEEcC
Confidence 7899999995 677777899999987532 2 221 11122345688999998
No 155
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=72.68 E-value=67 Score=31.33 Aligned_cols=59 Identities=8% Similarity=0.098 Sum_probs=37.8
Q ss_pred eeEEECCCC--CceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDG--SNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDG--s~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..|+++||+ .+.++++..+|.|+++++...+ ..+ .......+.....++|+| ++.+.++
T Consensus 43 ~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~------------~~~~~~h~~~v~~~~~~~----~~~~l~s 103 (368)
T 3mmy_A 43 GCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTI------------PKAQQMHTGPVLDVCWSD----DGSKVFT 103 (368)
T ss_dssp EEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEE------------EEEEEECSSCEEEEEECT----TSSEEEE
T ss_pred EEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--cee------------EEEeccccCCEEEEEECc----CCCEEEE
Confidence 688999994 3467777789999998763212 111 012233456789999998 4544443
No 156
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=72.66 E-value=30 Score=34.94 Aligned_cols=61 Identities=15% Similarity=0.231 Sum_probs=38.5
Q ss_pred eeEEECCCCCceEEEEecCc---eEEEEecCCCCCCCcccccCCCCccCcccceee-ccCCceeeeEeCCCCCcCCeEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDG---KTWLATVPEPGSGSKLELDESNPFLDLTDQVHA-DVELGMMGIAFHPNFQQNGRFFV 288 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G---~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~-~~e~GLLGiAfhPdF~~NG~~Yv 288 (697)
..|+++|||...+++....| .|+++++.. +. ..+ .... ..+.....++|+|+ ++.+++
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~-~~-~~~-------------~~~~~~~~~~v~~~~~s~~---~~~~l~ 279 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRN-AN-TPL-------------QTLNQGHQKGILSLDWCHQ---DEHLLL 279 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTS-TT-SCS-------------BCCCSCCSSCEEEEEECSS---CSSCEE
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCC-CC-CCc-------------EEeecCccCceeEEEeCCC---CCCeEE
Confidence 78999999866677777777 999887532 11 111 0111 23467889999983 455555
Q ss_pred EEe
Q 005419 289 SFN 291 (697)
Q Consensus 289 sYs 291 (697)
+-+
T Consensus 280 s~~ 282 (416)
T 2pm9_A 280 SSG 282 (416)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 157
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=72.34 E-value=77 Score=31.10 Aligned_cols=52 Identities=15% Similarity=0.292 Sum_probs=34.5
Q ss_pred eeEEECCC--CCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPD--GSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++++|+ |. .++++..+|.|+++++.. +. .. ..............++|+|.
T Consensus 105 ~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~-~~--~~-----------~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 105 NSVQWAPHEYGP-LLLVASSDGKVSVVEFKE-NG--TT-----------SPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEECCT-TS--CC-----------CEEEEECCTTCEEEEEECCC
T ss_pred EEEEeCCCCCCC-EEEEecCCCcEEEEecCC-CC--ce-----------eeEEecCCCCceEEEEEcCc
Confidence 78999999 64 678888899999987532 21 00 01122234567889999984
No 158
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=72.28 E-value=42 Score=33.65 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=33.4
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..|++.|||. +++.+..+|.|+++++. .+ +.+ ............++|+|+
T Consensus 59 ~~~~~s~d~~-~l~s~s~Dg~v~iWd~~-~~--~~~-------------~~~~~~~~~v~~~~~s~~ 108 (340)
T 1got_B 59 YAMHWGTDSR-LLLSASQDGKLIIWDSY-TT--NKV-------------HAIPLRSSWVMTCAYAPS 108 (340)
T ss_dssp EEEEECTTSS-EEEEEETTTEEEEEETT-TC--CEE-------------EEEECSSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECC-CC--Ccc-------------eEeecCCccEEEEEECCC
Confidence 6899999985 67777789999998742 22 111 011223445788999984
No 159
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=72.21 E-value=29 Score=38.41 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=39.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++|+||+..++..+..+|.|++++.+. ++.+ ....+-+.....++|+| +|.+.++-+
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---~~~~-------------~~l~~H~~~V~~v~fsp----dg~~las~s 209 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPP---FKFK-------------STFGEHTKFVHSVRYNP----DGSLFASTG 209 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTT---BEEE-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCC---CeEe-------------eeeccccCceEEEEECC----CCCEEEEEE
Confidence 57899999976677788899999986421 1111 11222345678999999 466666544
No 160
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=72.03 E-value=72 Score=30.68 Aligned_cols=55 Identities=18% Similarity=0.237 Sum_probs=36.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..++++|||. .++++...|.|+++++.. + +.. .....+.....++|+| +|.+.++
T Consensus 228 ~~~~~s~~~~-~l~~~~~~~~i~~~~~~~-~--~~~--------------~~~~~~~~v~~~~~~~----~~~~l~~ 282 (337)
T 1gxr_A 228 FSLGYCPTGE-WLAVGMESSNVEVLHVNK-P--DKY--------------QLHLHESCVLSLKFAY----CGKWFVS 282 (337)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTS-S--CEE--------------EECCCSSCEEEEEECT----TSSEEEE
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECCC-C--CeE--------------EEcCCccceeEEEECC----CCCEEEE
Confidence 7899999995 677888899999987522 1 111 1122345688999998 4554443
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=71.92 E-value=25 Score=39.36 Aligned_cols=19 Identities=21% Similarity=0.155 Sum_probs=13.9
Q ss_pred eeEEECCCCCceEEEEecCc
Q 005419 213 LNMVPHPDGSNRVFLSNQDG 232 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G 232 (697)
..++++|||. +|+++..++
T Consensus 212 ~~~~~SpDg~-~l~~~~~d~ 230 (741)
T 2ecf_A 212 TGYWWAPDDS-AIAYARIDE 230 (741)
T ss_dssp CSEEECTTSS-CEEEEEEEC
T ss_pred cceEECCCCC-EEEEEEEcC
Confidence 5689999996 677765543
No 162
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=71.86 E-value=33 Score=35.26 Aligned_cols=63 Identities=6% Similarity=-0.003 Sum_probs=43.8
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|++.|||. .++++..+|.|+++++.. ++.+. ............++++|.|..++.+.++-+
T Consensus 218 ~~~~~s~~~~-~l~s~~~dg~i~iwd~~~---~~~~~------------~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 218 SSICIDEECC-VLILGTTRGIIDIWDIRF---NVLIR------------SWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEETTT---TEEEE------------EEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEEcCC---ccEEE------------EEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 7899999984 677788899999987522 22211 111133456889999999999887766543
No 163
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=70.72 E-value=18 Score=37.13 Aligned_cols=65 Identities=18% Similarity=0.243 Sum_probs=37.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCC-eEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNG-RFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG-~~YvsYs 291 (697)
..++++|||. ++++-.+|.|+++++... ++.++ .+++.+............++|+|+ + .++++-+
T Consensus 181 ~~~~~~~~~~--~l~s~~d~~i~iwd~~~~--~~~~~------~~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~s~~ 246 (447)
T 3dw8_B 181 NSISINSDYE--TYLSADDLRINLWHLEIT--DRSFN------IVDIKPANMEELTEVITAAEFHPN----SCNTFVYSS 246 (447)
T ss_dssp CEEEECTTSS--EEEEECSSEEEEEETTEE--EEEEE------EEECCCSSGGGCCCCEEEEEECSS----CTTEEEEEE
T ss_pred EEEEEcCCCC--EEEEeCCCeEEEEECCCC--Cceee------eeecccccccccCcceEEEEECCC----CCcEEEEEe
Confidence 6899999984 555557999999875311 11111 122221112233456889999984 4 4555443
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=70.64 E-value=40 Score=37.11 Aligned_cols=26 Identities=12% Similarity=0.101 Sum_probs=19.0
Q ss_pred eeEEECCCCCceEEEEecC----------ceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQD----------GKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~----------G~V~~~~~ 239 (697)
..++++|||. +|+++... ..||++++
T Consensus 133 ~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 133 ADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp EEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred cCcEECCCCC-EEEEEEecccCCCCCCceeEEEEEEC
Confidence 6789999996 66665543 57888864
No 165
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=69.97 E-value=27 Score=35.05 Aligned_cols=58 Identities=10% Similarity=0.177 Sum_probs=35.0
Q ss_pred eeEEECC--CCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHP--DGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~p--DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|+++| +|. .+..+..+|.|+++++. .+ +.+.+ ...........++||| +|.+.++-
T Consensus 129 ~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~-~~--~~~~~------------~~~~~~~~i~~~~~~p----dg~~lasg 188 (343)
T 3lrv_A 129 IYMYGHNEVNTE-YFIWADNRGTIGFQSYE-DD--SQYIV------------HSAKSDVEYSSGVLHK----DSLLLALY 188 (343)
T ss_dssp EEEECCC---CC-EEEEEETTCCEEEEESS-SS--CEEEE------------ECCCSSCCCCEEEECT----TSCEEEEE
T ss_pred EEEEcCCCCCCC-EEEEEeCCCcEEEEECC-CC--cEEEE------------EecCCCCceEEEEECC----CCCEEEEE
Confidence 6889999 884 45557789999998752 22 11110 0012234588999999 46665543
No 166
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=69.88 E-value=91 Score=33.53 Aligned_cols=135 Identities=14% Similarity=0.211 Sum_probs=81.7
Q ss_pred eeEEECCC---CCceEEEEecCc-eEEEEecCCCCCCCcccccCCCCccCcccceeeccCCc----eeeeEeCCCCCcCC
Q 005419 213 LNMVPHPD---GSNRVFLSNQDG-KTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELG----MMGIAFHPNFQQNG 284 (697)
Q Consensus 213 ~~m~~~pD---Gs~RlfV~Eq~G-~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~G----LLGiAfhPdF~~NG 284 (697)
-+|+.+|| |...||..-..| +++.+.. ..|+ ... +...|..-+++| -+++|.|+ ++|
T Consensus 223 ~gIaLsp~~~~~~~~LYf~plss~~ly~V~T------~~L~--~~~----~~~~v~~~G~kg~~s~~~~~~~D~---~~G 287 (381)
T 3q6k_A 223 FGITLGDRDSEGNRPAYYLAGSAIKVYSVNT------KELK--QKG----GKLNPELLGNRGKYNDAIALAYDP---KTK 287 (381)
T ss_dssp EEEEECCCCTTSCCEEEEEESSCSEEEEEEH------HHHS--STT----CCCCCEEEEECCTTCCEEEEEECT---TTC
T ss_pred eEEEecCCcCCCCeEEEEEECCCCcEEEEEH------HHhh--Ccc----hhhceEEeeecCCCCCcceEEEeC---CCC
Confidence 46788887 234688888877 5776531 1221 111 133454456666 35678875 489
Q ss_pred eEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcccEEEEEEEEcC-CcccccccccccCCCceEEEEeec
Q 005419 285 RFFVSFNCDKIIWPECSGRCSCNTDVGCDPSKLGSDNGAMPCQYHSVIAEFSANG-TKTVQHSSVASVKPLEVRRILTMG 363 (697)
Q Consensus 285 ~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dng~~p~~~~~~Vsr~t~~~-~~~~~~s~~~~~~~~~~r~Il~~~ 363 (697)
.+|+.... ++.|.+|..+. . -.+...++|.. +
T Consensus 288 ~ly~~~~~------------------------------------~~aI~~w~~~~~~----------~~~~n~~~l~~-d 320 (381)
T 3q6k_A 288 VIFFAEAN------------------------------------TKQVSCWNTQKMP----------LRMKNTDVVYT-S 320 (381)
T ss_dssp EEEEEESS------------------------------------SSEEEEEETTSCS----------BCGGGEEEEEE-C
T ss_pred eEEEEecc------------------------------------CCeEEEEeCCCCc----------cccCceEEEEE-C
Confidence 99887542 14677776432 1 11234455543 2
Q ss_pred cCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccc--cccCCCceEEEE-ecC
Q 005419 364 LHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQ--NKKSLLGKIMRL-DVD 416 (697)
Q Consensus 364 ~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQ--n~~sl~GKILRI-dvD 416 (697)
| .-.+.-.|.++. ||+|||.+---- .|...+ |.....=.|+|+ +++
T Consensus 321 -~-~l~~pd~~~i~~-~g~Lwv~sn~l~----~~~~g~l~d~~~~nfrI~r~~~~~ 369 (381)
T 3q6k_A 321 -S-RFVFGTDISVDS-KGGLWFMSNGFP----PIRKSEKFKYDFPRYRLMRIMDTQ 369 (381)
T ss_dssp -T-TCCSEEEEEECT-TSCEEEEECSCC----SSTTGGGCCCSSCSEEEEEESCHH
T ss_pred -C-CccccCeEEECC-CCeEEEEECcch----HhhcCCcCCCCcCCEEEEEecCHH
Confidence 3 445667789999 999999995532 244444 677777889999 664
No 167
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=69.82 E-value=35 Score=34.15 Aligned_cols=54 Identities=7% Similarity=0.162 Sum_probs=32.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++++|||. .++++..+|.|+++++.. +. .. .+...+....+.....++|+|+
T Consensus 104 ~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~--~~---------~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 104 TFVRWSPNED-KFAVGSGARVISVCYFEQ-EN--DW---------WVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EEEECCTTSS-CCEEEESSSCEEECCC--------C---------CCCEEECSSCCSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEecCCeEEEEEECC-cc--cc---------eeeeEeecccCCCeEEEEEcCC
Confidence 6889999985 688888899999876422 21 10 0001111113567889999984
No 168
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=69.66 E-value=79 Score=30.16 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=39.1
Q ss_pred eeEEECCC--CCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEE
Q 005419 213 LNMVPHPD--GSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFV 288 (697)
Q Consensus 213 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yv 288 (697)
..|+++|+ |. .++++..+|.|+++++........+.+......+.+ ...........++|+|+.....++.+
T Consensus 114 ~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 114 YSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI---PPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp EEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC---CCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred eEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccccccc---ccCCcccceeEEEeccCCCCCcEEEE
Confidence 78999999 74 677778899999997633111111100000000000 01134456789999997444444444
No 169
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=69.13 E-value=88 Score=30.45 Aligned_cols=51 Identities=16% Similarity=0.121 Sum_probs=34.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.|||. .++++..+|.|+++++... ++.+ ...........+++|+|+
T Consensus 179 ~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--~~~~-------------~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 179 TVAGWSTKGK-YIIAGHKDGKISKYDVSNN--YEYV-------------DSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp EEEEECGGGC-EEEEEETTSEEEEEETTTT--TEEE-------------EEEECCSSCEEEEEECTT
T ss_pred eEEEEcCCCC-EEEEEcCCCEEEEEECCCC--cEeE-------------EEEecCCCceeEEEECCC
Confidence 7889999985 6777888999999875221 1111 112223556889999983
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=69.01 E-value=97 Score=30.93 Aligned_cols=25 Identities=28% Similarity=0.355 Sum_probs=16.9
Q ss_pred EEECCCCCceEEEEecCc--eEEEEec
Q 005419 215 MVPHPDGSNRVFLSNQDG--KTWLATV 239 (697)
Q Consensus 215 m~~~pDGs~RlfV~Eq~G--~V~~~~~ 239 (697)
.+++|||..=+|+.++.| .||++++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~ 67 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDL 67 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeC
Confidence 678999963344444467 5998864
No 171
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=68.71 E-value=84 Score=31.50 Aligned_cols=61 Identities=16% Similarity=0.190 Sum_probs=38.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|++.|||...++.+..+|.|+++++.. +. ... .+. .........+++|+|+ ++.+.++-
T Consensus 77 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~--~~~------~~~-----~~~h~~~v~~~~~~~~---~~~~l~s~ 137 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSKGGDIILWDYDV-QN--KTS------FIQ-----GMGPGDAITGMKFNQF---NTNQLFVS 137 (383)
T ss_dssp EEEEECSSCTTEEEEEEBTSCEEEEETTS-TT--CEE------EEC-----CCSTTCBEEEEEEETT---EEEEEEEE
T ss_pred EEEEECCCCCCEEEEEcCCCeEEEEeCCC-cc--cce------eee-----cCCcCCceeEEEeCCC---CCCEEEEE
Confidence 68999999955788888899999987532 21 110 000 0123567889999983 34444443
No 172
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=68.46 E-value=74 Score=36.65 Aligned_cols=37 Identities=24% Similarity=0.544 Sum_probs=26.3
Q ss_pred eeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCC
Q 005419 372 GQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDK 417 (697)
Q Consensus 372 G~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 417 (697)
..+++.| ++.||+..+|+.. |+. + +..|.|+|.+..|
T Consensus 247 ~~~~~~~-~~~l~~~~~d~~g---~y~--~---~~~g~v~~s~d~G 283 (737)
T 2cn3_A 247 HHGVLAS-NGMLYITYGDTCG---PYD--G---NGKGQVWKFNTRT 283 (737)
T ss_dssp EEEEECT-TSEEEEEEESSCC---SSC--C---SCCEEEEEEETTT
T ss_pred eEEEECC-CCeEEEEecCCCC---ccc--c---ccCceEEEEeCCC
Confidence 4567899 9999999998642 221 1 3568899988655
No 173
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=68.32 E-value=57 Score=32.67 Aligned_cols=25 Identities=8% Similarity=0.114 Sum_probs=22.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..|++.||| .+++...+|.|+++++
T Consensus 190 ~~~~~~~~~--~l~~~~~dg~i~i~d~ 214 (397)
T 1sq9_A 190 TSVDISERG--LIATGFNNGTVQISEL 214 (397)
T ss_dssp CEEEECTTS--EEEEECTTSEEEEEET
T ss_pred eEEEECCCc--eEEEEeCCCcEEEEEC
Confidence 689999998 7888889999999875
No 174
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=68.06 E-value=42 Score=37.67 Aligned_cols=50 Identities=12% Similarity=0.056 Sum_probs=34.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++++|||. .+.++..+|.|+++++. . ++.+ ......+.....++|+|+
T Consensus 17 ~~i~~sp~~~-~la~~~~~g~v~iwd~~-~--~~~~-------------~~~~~~~~~v~~~~~s~~ 66 (814)
T 3mkq_A 17 KGIDFHPTEP-WVLTTLYSGRVEIWNYE-T--QVEV-------------RSIQVTETPVRAGKFIAR 66 (814)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETT-T--TEEE-------------EEEECCSSCEEEEEEEGG
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECC-C--CceE-------------EEEecCCCcEEEEEEeCC
Confidence 7899999995 67777889999998752 2 2221 111233456789999983
No 175
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=67.79 E-value=93 Score=31.00 Aligned_cols=62 Identities=18% Similarity=0.307 Sum_probs=37.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. .+..+..+|.|+++++.+.+. ..+ . + .+...-......++|+|+ +.+.++-+
T Consensus 111 ~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~--~~~-----~-~----~~~~~h~~~v~~v~~~p~----~~~l~s~s 172 (330)
T 2hes_X 111 KGVAWSNDGY-YLATCSRDKSVWIWETDESGE--EYE-----C-I----SVLQEHSQDVKHVIWHPS----EALLASSS 172 (330)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEECCTTCC--CCE-----E-E----EEECCCSSCEEEEEECSS----SSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeccCCCC--CeE-----E-E----EEeccCCCceEEEEECCC----CCEEEEEc
Confidence 6899999985 566667899999987532211 100 0 0 111223456789999994 55555443
No 176
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=66.91 E-value=87 Score=34.92 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=44.8
Q ss_pred CcEEEEEecCce---eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY---LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
++.+.....|-. ..+++.|++.+.|..+..+|.|+++++..... . ..........-......++|+
T Consensus 371 ~l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~--~---------~~~~~~~~~~h~~~v~~v~~s 439 (694)
T 3dm0_A 371 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK--A---------YGVAQRRLTGHSHFVEDVVLS 439 (694)
T ss_dssp SSEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT--C---------SCEEEEEEECCSSCEEEEEEC
T ss_pred ccchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc--c---------cccccceecCCCCcEEEEEEC
Confidence 556655444444 67888998865566677899999987632111 0 000011223344567899999
Q ss_pred CCCCcCCeEEEEEe
Q 005419 278 PNFQQNGRFFVSFN 291 (697)
Q Consensus 278 PdF~~NG~~YvsYs 291 (697)
| +|.+.++-+
T Consensus 440 ~----~g~~l~sgs 449 (694)
T 3dm0_A 440 S----DGQFALSGS 449 (694)
T ss_dssp T----TSSEEEEEE
T ss_pred C----CCCEEEEEe
Confidence 8 466555443
No 177
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=66.65 E-value=12 Score=42.68 Aligned_cols=99 Identities=24% Similarity=0.350 Sum_probs=54.3
Q ss_pred eeEeCCCCCeEEEEecCCCCCC---CCccccccc--cCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCC-
Q 005419 373 QILFGPEDGHLYFMVGDGEGRG---DPYNFSQNK--KSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQ- 446 (697)
Q Consensus 373 ~L~FGP~DG~LYis~GDgg~~~---DP~~~aQn~--~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~- 446 (697)
.|.+.|.+|.+|+++=.....+ .|. .+.|+ ....|.|+|++.++.. .......|..|-+ .++|-..+..
T Consensus 388 di~v~p~~g~vY~alTnn~~rg~~~~~~-~~~Npr~~n~~G~I~r~~e~~~d---~~a~~f~W~i~l~-~G~p~~~~~~~ 462 (592)
T 4a9v_A 388 WIVVSPKDGQVYCTLTNNAKRGEDGQPV-GGPNPREKNVYGQILRWRTDRDD---HASKTFAWDLFVV-AGNPSVHAGTP 462 (592)
T ss_dssp EEEECTTTCCEEEEECCBTTTTSTTSCC-BTTBCCSSBSSCEEEEEEEGGGC---TTCSEEEEEEEEE-CCCTTTSTTSG
T ss_pred ceeEcCCCCEEEEEEeCCCCCCCcCccc-cCCCCccCCCCCeEEEEeeCCCC---cccceeeEEEEEE-ccCCccccccc
Confidence 4788887899999974433221 121 23333 4578999999986521 1122333544433 2233211100
Q ss_pred ---CCCeEEEeccccceeeeecCCCCCeEEE-EEcC
Q 005419 447 ---LQPEIWALGFRNPWRCSFDAERPSYFLC-ADVG 478 (697)
Q Consensus 447 ---~~pEI~A~GlRNP~r~sfDp~~g~~L~~-~DvG 478 (697)
.....=.-.|.+|=.++||+. | .||+ +|-+
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~~-G-~LWf~TD~~ 496 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDKA-G-RLWILTDGD 496 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTT-C-CEEEEECCC
T ss_pred ccCccCccccCccCCCCceEECCC-C-CEEEEeCCC
Confidence 000000124789999999997 4 4888 7854
No 178
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=66.38 E-value=75 Score=31.16 Aligned_cols=64 Identities=9% Similarity=0.078 Sum_probs=36.4
Q ss_pred eeEEECC-------------CCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHP-------------DGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~p-------------DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.| |+. .++++..+|.|+++++.. +.. ... + .............++|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~-~~~---------~-~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNS-DAQ-TYV---------L-ESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp EEEEECCCC----------CTTC-EEEEEETTSCEEEEEEET-TTT-EEE---------E-EEEECCCSSCEEEEEECCC
T ss_pred EEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecC-CCc-cee---------e-EEEEecccCcEeEEEECCC
Confidence 6788888 563 677777899999987532 110 000 0 0111223456789999995
Q ss_pred CCcCCeEEEEE
Q 005419 280 FQQNGRFFVSF 290 (697)
Q Consensus 280 F~~NG~~YvsY 290 (697)
.. .+.+.++-
T Consensus 218 ~~-~~~~l~s~ 227 (379)
T 3jrp_A 218 VL-LRSYLASV 227 (379)
T ss_dssp CS-SSEEEEEE
T ss_pred CC-CCCeEEEE
Confidence 31 14554443
No 179
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=66.31 E-value=68 Score=31.31 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=36.9
Q ss_pred eeEEECCCCC---ceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGS---NRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs---~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..+++.||+. ..++++..+|.|+++++. .+ +.+ ............++|+|+ ++.+.++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~--~~~-------------~~~~~~~~~i~~~~~~~~---~~~~l~s 133 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPI-TM--QCI-------------KHYVGHGNAINELKFHPR---DPNLLLS 133 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTT-TC--CEE-------------EEEESCCSCEEEEEECSS---CTTEEEE
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEch-hc--eEe-------------eeecCCCCcEEEEEECCC---CCCEEEE
Confidence 6788888843 256667789999998642 22 221 112234567889999982 4555554
Q ss_pred Ee
Q 005419 290 FN 291 (697)
Q Consensus 290 Ys 291 (697)
-+
T Consensus 134 ~~ 135 (366)
T 3k26_A 134 VS 135 (366)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 180
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=66.23 E-value=1e+02 Score=30.21 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=21.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..|+++|||. .++++..+|.|+++++
T Consensus 146 ~~~~~~~~~~-~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 146 LSLDWHPNSV-LLAAGSCDFKCRIFSA 171 (372)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEC
T ss_pred eEEEEcCCCC-EEEEEcCCCCEEEEEc
Confidence 7899999984 6777778999999874
No 181
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=66.09 E-value=41 Score=33.66 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=33.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.||| ++++...+|.|+++++. . ++.+ ......+.....++|+|+
T Consensus 293 ~~~~~~~~~--~l~~~~~d~~i~i~d~~-~--~~~~-------------~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 293 VSASWVGDD--KVISCSMDGSVRLWSLK-Q--NTLL-------------ALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp EEEEEETTT--EEEEEETTSEEEEEETT-T--TEEE-------------EEEECTTCCEEEEEECTT
T ss_pred EEEEECCCC--EEEEEeCCCcEEEEECC-C--CcEe-------------EecccCCccEEEEEEcCC
Confidence 688999998 78888899999998752 1 2111 111223456789999984
No 182
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=65.99 E-value=70 Score=32.34 Aligned_cols=50 Identities=20% Similarity=0.201 Sum_probs=34.4
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..|+++|||. .++.+..+|.|+++++.. +. .+ ............++|+|+
T Consensus 143 ~~~~~~~~~~-~l~s~s~d~~i~iwd~~~-~~--~~-------------~~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 143 TKLKFFPSGE-ALISSSQDMQLKIWSVKD-GS--NP-------------RTLIGHRATVTDIAIIDR 192 (420)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT-CC--CC-------------EEEECCSSCEEEEEEETT
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEeCCC-Cc--Cc-------------eEEcCCCCcEEEEEEcCC
Confidence 7899999985 677778899999997532 21 11 112233456889999984
No 183
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=65.54 E-value=93 Score=31.86 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=33.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.|||. +++.+..+|.|+++++. . ++.+ .+....+.....++|+|+
T Consensus 127 ~~v~~s~dg~-~l~s~~~d~~i~iwd~~-~--~~~~-------------~~~~~h~~~v~~~~~~p~ 176 (393)
T 1erj_A 127 RSVCFSPDGK-FLATGAEDRLIRIWDIE-N--RKIV-------------MILQGHEQDIYSLDYFPS 176 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-T--TEEE-------------EEECCCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECC-C--CcEE-------------EEEccCCCCEEEEEEcCC
Confidence 5789999995 67777789999998752 1 1111 112233456789999984
No 184
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=65.39 E-value=36 Score=33.29 Aligned_cols=55 Identities=5% Similarity=0.047 Sum_probs=34.3
Q ss_pred eeEEECC---CCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHP---DGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~p---DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.| +|. .++++..+|.|+++++.. + +.+ ..+..............++|+|+
T Consensus 213 ~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~--~~~--------~~~~~~~~~~~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 213 CSLEFDRKDISMN-KLVATSLEGKFHVFDMRT-Q--HPT--------KGFASVSEKAHKSTVWQVRHLPQ 270 (357)
T ss_dssp EEEEESCSSSSCC-EEEEEESTTEEEEEEEEE-E--ETT--------TEEEEEEEECCSSCEEEEEEETT
T ss_pred EEEEcCCCCCCCC-EEEEECCCCeEEEEeCcC-C--Ccc--------cceeeeccCCCcCCEEEEEECCC
Confidence 7899999 774 688888899999987532 1 111 00000011234567889999984
No 185
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=64.59 E-value=84 Score=32.77 Aligned_cols=63 Identities=6% Similarity=0.064 Sum_probs=39.0
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..+++.|||. .|+++.+.|.|+++++.+ +. .. ..+. ............++|+|+. ..+.+.++
T Consensus 153 ~~~~~sp~~~-~l~~~~~~g~v~~~~~~~-~~--~~----~~~~-----~~~~~h~~~v~~~~~sp~~-~~~~~l~s 215 (450)
T 2vdu_B 153 NAISIAEDDT-TVIIADKFGDVYSIDINS-IP--EE----KFTQ-----EPILGHVSMLTDVHLIKDS-DGHQFIIT 215 (450)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTS-CC--CS----SCCC-----CCSEECSSCEEEEEEEECT-TSCEEEEE
T ss_pred eEEEEcCCCC-EEEEEeCCCcEEEEecCC-cc--cc----cccc-----eeeecccCceEEEEEcCCC-CCCcEEEE
Confidence 6899999995 788888999999987532 21 11 0000 1112234578899999953 12544443
No 186
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=64.57 E-value=1.3e+02 Score=30.62 Aligned_cols=27 Identities=22% Similarity=0.329 Sum_probs=22.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|+|.+.++.+..+|.|+++++
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 689999998557888888999999875
No 187
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=64.55 E-value=94 Score=31.44 Aligned_cols=56 Identities=25% Similarity=0.172 Sum_probs=36.7
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
+.|+++|||. +++.+.++|.|++++... + +.. ..........+.++|+| +|.+.++
T Consensus 68 ~~~~~s~d~~-~l~s~s~Dg~v~vWd~~~-~--~~~-------------~~~~~~~~~v~~~~~sp----~g~~las 123 (354)
T 2pbi_B 68 LCMDWCKDKR-RIVSSSQDGKVIVWDSFT-T--NKE-------------HAVTMPCTWVMACAYAP----SGCAIAC 123 (354)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT-C--CEE-------------EEEECSSSCCCEEEECT----TSSEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECCC-C--Ccc-------------eEEecCCCCEEEEEECC----CCCEEEE
Confidence 7899999995 788888999999987421 2 111 01112234578899998 4655544
No 188
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=63.88 E-value=1.6e+02 Score=31.48 Aligned_cols=25 Identities=12% Similarity=0.231 Sum_probs=18.1
Q ss_pred cceeeeecCCC-CC-eEEEEEcCCCCc
Q 005419 458 NPWRCSFDAER-PS-YFLCADVGQDEY 482 (697)
Q Consensus 458 NP~r~sfDp~~-g~-~L~~~DvG~d~~ 482 (697)
.+-++++.+.. +. +|++++.|.+.+
T Consensus 230 DvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 230 DIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp CEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred CcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 77899986442 22 799999998653
No 189
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=63.77 E-value=72 Score=31.88 Aligned_cols=26 Identities=15% Similarity=0.268 Sum_probs=21.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|||. .|..+..+|.|+++++
T Consensus 217 ~~~~~s~~g~-~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 217 NHLSISPNGK-YIATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEES
T ss_pred eEEEECCCCC-EEEEEcCCCeEEEEEC
Confidence 6789999995 5666778999999875
No 190
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=63.70 E-value=65 Score=33.52 Aligned_cols=66 Identities=12% Similarity=0.161 Sum_probs=40.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..|++.|++.+.++.+..+|.|+++++...+... ..+.. ............+++|+|+ ++.++++-
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~--------~~~~~-~~~~~~h~~~v~~v~~~p~---~~~~l~s~ 250 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDHTICLWDINATPKEH--------RVIDA-KNIFTGHTAVVEDVAWHLL---HESLFGSV 250 (430)
T ss_dssp CCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG--------GEEEC-SEEECCCSSCEEEEEECSS---CTTEEEEE
T ss_pred EEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC--------ceecc-ceeecCCCCCEeeeEEeCC---CCCEEEEE
Confidence 7899999997677778889999998763211100 01111 0122234556889999984 45565543
No 191
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=63.51 E-value=88 Score=31.19 Aligned_cols=49 Identities=6% Similarity=0.043 Sum_probs=32.8
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
..|++.|||. .++++..+|.|+++++.. + +.+ ............++|+|
T Consensus 251 ~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~--~~~-------------~~~~~~~~~i~~~~~~~ 299 (425)
T 1r5m_A 251 SVLEFNDTNK-LLLSASDDGTLRIWHGGN-G--NSQ-------------NCFYGHSQSIVSASWVG 299 (425)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEECSSS-B--SCS-------------EEECCCSSCEEEEEEET
T ss_pred EEEEECCCCC-EEEEEcCCCEEEEEECCC-C--ccc-------------eEecCCCccEEEEEECC
Confidence 6789999985 677778899999986422 1 111 11122345678999998
No 192
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=62.98 E-value=74 Score=36.30 Aligned_cols=25 Identities=12% Similarity=0.131 Sum_probs=22.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLAT 238 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~ 238 (697)
+.++|+|||. ++-++..+|.|++++
T Consensus 89 ~~vawSPdG~-~LAs~s~dg~V~iwd 113 (588)
T 2j04_A 89 RVCKPSPIDD-WMAVLSNNGNVSVFK 113 (588)
T ss_dssp EEEEECSSSS-CEEEEETTSCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEe
Confidence 7899999996 788889999999986
No 193
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=61.51 E-value=52 Score=35.09 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=33.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHP 278 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhP 278 (697)
..|++.|||. .+.++..+|.|+++++.. ++.+. ............++|+|
T Consensus 492 ~~~~~s~~g~-~l~~~~~dg~i~iw~~~~---~~~~~------------~~~~~h~~~v~~~~~sp 541 (615)
T 1pgu_A 492 SYISISPSET-YIAAGDVMGKILLYDLQS---REVKT------------SRWAFRTSKINAISWKP 541 (615)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTT---TEEEE------------CCSCCCSSCEEEEEECC
T ss_pred EEEEECCCCC-EEEEcCCCCeEEEeeCCC---Cccee------------EeecCCCCceeEEEEcC
Confidence 6899999995 677777899999987532 22221 00000345688999998
No 194
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=61.42 E-value=18 Score=37.20 Aligned_cols=61 Identities=15% Similarity=0.218 Sum_probs=39.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEee
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNC 292 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs~ 292 (697)
..|+++|||. .|.++..+|.|+++++. +++.++ .++. .-.....++||+| +|++.++-+.
T Consensus 273 ~~~~~Spdg~-~lasgs~D~~V~iwd~~---~~~~~~-----~~~~-------gH~~~V~~v~fSp----dg~~laS~S~ 332 (365)
T 4h5i_A 273 TSMDVDMKGE-LAVLASNDNSIALVKLK---DLSMSK-----IFKQ-------AHSFAITEVTISP----DSTYVASVSA 332 (365)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEETT---TTEEEE-----EETT-------SSSSCEEEEEECT----TSCEEEEEET
T ss_pred EeEEECCCCC-ceEEEcCCCEEEEEECC---CCcEEE-----EecC-------cccCCEEEEEECC----CCCEEEEEeC
Confidence 5789999994 55566789999998752 222221 1111 1234578999999 6777777664
Q ss_pred c
Q 005419 293 D 293 (697)
Q Consensus 293 ~ 293 (697)
|
T Consensus 333 D 333 (365)
T 4h5i_A 333 A 333 (365)
T ss_dssp T
T ss_pred C
Confidence 3
No 195
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=61.18 E-value=91 Score=30.45 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=37.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..+++.|||. +|..+..+|.|+++++.. +..+.+ .+...-+.....++|.|+ .+|.+.++-+
T Consensus 13 ~~~~~s~~g~-~las~s~D~~v~iw~~~~-~~~~~~-------------~~l~gH~~~V~~v~~s~~--~~g~~l~s~s 74 (297)
T 2pm7_B 13 HDAVMDYYGK-RMATCSSDKTIKIFEVEG-ETHKLI-------------DTLTGHEGPVWRVDWAHP--KFGTILASCS 74 (297)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEBCS-SCBCCC-------------EEECCCSSCEEEEEECCG--GGCSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEecCC-CCcEEE-------------EEEccccCCeEEEEecCC--CcCCEEEEEc
Confidence 5788999995 677777899999987532 111111 112233456788999652 2355555443
No 196
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=60.70 E-value=2e+02 Score=31.68 Aligned_cols=26 Identities=15% Similarity=0.192 Sum_probs=19.2
Q ss_pred eeEEECCCCCceEEEEecC-----ceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQD-----GKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~-----G~V~~~~~ 239 (697)
..++++|||. +++++..+ ..|+++++
T Consensus 261 ~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 261 TNLSWSPDEN-ILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp EEEEECTTSS-EEEEEEECTTSCEEEEEEEET
T ss_pred eeEEEECCCC-EEEEEEeCCCCCeeEEEEEEC
Confidence 5789999995 67776544 38888864
No 197
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=60.53 E-value=48 Score=36.57 Aligned_cols=60 Identities=12% Similarity=0.132 Sum_probs=35.6
Q ss_pred CceeeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 210 GAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 210 Gl~~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
|-.+.+++.|||. .++.-..+.|++.++ +++. .+ .++.+-......+||+| +|.+-++
T Consensus 19 g~~~~~~~spdg~--~l~~~~~~~v~l~~~-~~~~--~~-------------~~~~~h~~~v~~~~~sp----dg~~las 76 (611)
T 1nr0_A 19 GTAVVLGNTPAGD--KIQYCNGTSVYTVPV-GSLT--DT-------------EIYTEHSHQTTVAKTSP----SGYYCAS 76 (611)
T ss_dssp TCCCCCEECTTSS--EEEEEETTEEEEEET-TCSS--CC-------------EEECCCSSCEEEEEECT----TSSEEEE
T ss_pred CceeEEeeCCCCC--EEEeCCCCEEEEecC-CCcc--cC-------------eEecCCCCceEEEEECC----CCcEEEE
Confidence 3336788999994 444444668888764 2221 11 12223345578899999 5766565
Q ss_pred Ee
Q 005419 290 FN 291 (697)
Q Consensus 290 Ys 291 (697)
-+
T Consensus 77 g~ 78 (611)
T 1nr0_A 77 GD 78 (611)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 198
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=60.48 E-value=1.4e+02 Score=29.80 Aligned_cols=38 Identities=8% Similarity=0.129 Sum_probs=27.0
Q ss_pred CcEEEEEecCce-eeEEECC-CCCceEEEEecCceEEEEec
Q 005419 201 GLCLEKVGTGAY-LNMVPHP-DGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 201 G~~le~va~Gl~-~~m~~~p-DGs~RlfV~Eq~G~V~~~~~ 239 (697)
+-++..+...-. ..+++.| ||. .++++..+|.|+++++
T Consensus 241 ~~~~~~~~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 241 NSYIAEMPHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSS 280 (383)
T ss_dssp TCEEEEEECSSCEEEEEECTTTSC-EEEEEESSSEEEEEET
T ss_pred cceEEEecCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEEC
Confidence 344555542223 7899999 885 6777778999999975
No 199
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=59.49 E-value=15 Score=37.80 Aligned_cols=63 Identities=22% Similarity=0.278 Sum_probs=38.0
Q ss_pred EEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcccce--eeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 215 MVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQV--HADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 215 m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V--~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
|.+. || ++|+.. +...|.+++ |+. |+.+.. ..+-.+.+.. ....+..|-|||++|+ ..+|||.
T Consensus 177 Le~~-~G--~lyan~w~~~~I~vID-p~t--G~V~~~---Id~~~L~~~~~~~~~~~~vlNGIA~dp~---~~~lfVT 242 (262)
T 3nol_A 177 LEWV-DG--EIFANVWQTNKIVRID-PET--GKVTGI---IDLNGILAEAGPLPSPIDVLNGIAWDKE---HHRLFVT 242 (262)
T ss_dssp EEEE-TT--EEEEEETTSSEEEEEC-TTT--CBEEEE---EECTTGGGGSCSCCSSCCCEEEEEEETT---TTEEEEE
T ss_pred eEEE-CC--EEEEEEccCCeEEEEE-CCC--CcEEEE---EECCcCccccccccCcCCceEEEEEcCC---CCEEEEE
Confidence 5665 66 799998 578898886 554 333321 1111122221 1233467999999984 6789985
No 200
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=59.05 E-value=75 Score=32.95 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=37.4
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|+++||+. .++.+..+|.|+++++. .+. .+ .....-......++|+| +|.+.++-+
T Consensus 112 ~~~~~~p~~~-~l~s~s~Dg~i~vwd~~-~~~--~~-------------~~l~~h~~~V~~v~~~~----~~~~l~sgs 169 (410)
T 1vyh_C 112 TRVIFHPVFS-VMVSASEDATIKVWDYE-TGD--FE-------------RTLKGHTDSVQDISFDH----SGKLLASCS 169 (410)
T ss_dssp EEEEECSSSS-EEEEEESSSCEEEEETT-TCC--CC-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECC-CCc--EE-------------EEEeccCCcEEEEEEcC----CCCEEEEEe
Confidence 6899999985 56666689999998752 221 11 11222345678999998 466555544
No 201
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=59.05 E-value=94 Score=30.91 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=21.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|||. .++.+..+|.|+++++
T Consensus 150 ~~~~~~~~~~-~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 150 LSLDWHPNNV-LLAAGCADRKAYVLSA 175 (377)
T ss_dssp EEEEECTTSS-EEEEEESSSCEEEEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEEE
Confidence 7899999985 6777778999998875
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=59.02 E-value=47 Score=35.72 Aligned_cols=20 Identities=20% Similarity=0.443 Sum_probs=14.8
Q ss_pred ceeeeEeCCCCCcCCeEEEEEee
Q 005419 270 GMMGIAFHPNFQQNGRFFVSFNC 292 (697)
Q Consensus 270 GLLGiAfhPdF~~NG~~YvsYs~ 292 (697)
|...+|+||+ .+++||....
T Consensus 281 g~q~~a~~~~---~~~lyV~~~~ 300 (386)
T 3sjl_D 281 GWQQVAYHRA---LDRIYLLVDQ 300 (386)
T ss_dssp SSSCEEEETT---TTEEEEEEEE
T ss_pred CcceeeECCC---CCeEEEEecc
Confidence 5556888874 7899998764
No 203
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=58.37 E-value=1.6e+02 Score=29.88 Aligned_cols=49 Identities=12% Similarity=0.224 Sum_probs=32.1
Q ss_pred eeEEECCCCCceEEEEe---cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSN---QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~E---q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..|+++|+|. +++++- .+|.|+++++.. ++.+. ..........++|+|+
T Consensus 263 ~~~~~~p~~~-~ll~~~~gs~d~~i~i~d~~~---~~~~~--------------~~~~~~~v~~~~~s~~ 314 (401)
T 4aez_A 263 KAVAWCPWQS-NLLATGGGTMDKQIHFWNAAT---GARVN--------------TVDAGSQVTSLIWSPH 314 (401)
T ss_dssp CEEEECTTST-TEEEEECCTTTCEEEEEETTT---CCEEE--------------EEECSSCEEEEEECSS
T ss_pred EEEEECCCCC-CEEEEecCCCCCEEEEEECCC---CCEEE--------------EEeCCCcEEEEEECCC
Confidence 6899999986 466653 589999987532 22211 1123456889999984
No 204
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=57.77 E-value=1.4e+02 Score=28.90 Aligned_cols=50 Identities=14% Similarity=0.136 Sum_probs=33.0
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.|||. .++.+..+|.|+++++.. + +.+. ...........++|+|+
T Consensus 69 ~~~~~~~~~~-~l~s~~~d~~i~vwd~~~-~--~~~~-------------~~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 69 SDVAWSSDSN-LLVSASDDKTLKIWDVSS-G--KCLK-------------TLKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT-C--CEEE-------------EEECCSSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEECCCCEEEEEECCC-C--cEEE-------------EEcCCCCCEEEEEEcCC
Confidence 6799999984 677777899999987532 2 2210 11223345788999983
No 205
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=57.46 E-value=1.4e+02 Score=28.97 Aligned_cols=53 Identities=15% Similarity=0.264 Sum_probs=34.2
Q ss_pred eeEEECCC--CCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCC
Q 005419 213 LNMVPHPD--GSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNF 280 (697)
Q Consensus 213 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF 280 (697)
..++++|+ | ..+.++..+|.|+++++.. +. .. . ..+......+...++|+|+-
T Consensus 103 ~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~-~~--~~-----~------~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 103 NSVQWAPHEYG-PMLLVASSDGKVSVVEFKE-NG--TT-----S------PIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEECCGGGC-SEEEEEETTSEEEEEEBCS-SS--CB-----C------CEEEECCSSCEEEEEECCCC
T ss_pred eEEEeCcCCCC-cEEEEEECCCcEEEEEecC-CC--ce-----e------eeeeecccCccceEeecCCc
Confidence 57889998 5 3677777899999987532 11 00 0 11222345678899999964
No 206
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=57.33 E-value=1.5e+02 Score=29.20 Aligned_cols=64 Identities=9% Similarity=0.109 Sum_probs=37.7
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..+++.|++.+.++.+..+|.|+++++..... .. ..+ -....+-......++|+| +|.+.++-+
T Consensus 21 ~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~--~~----~~~-----~~~~~~h~~~v~~~~~s~----dg~~l~s~s 84 (319)
T 3frx_A 21 TSLATSAGQPNLLLSASRDKTLISWKLTGDDQ--KF----GVP-----VRSFKGHSHIVQDCTLTA----DGAYALSAS 84 (319)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEEEEEETT--EE----EEE-----EEEEECCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEccCCCccEEEEecCCccEEEecCCCCCc--cc----ccc-----ceEEeCCcccEEEEEECC----CCCEEEEEe
Confidence 67889998765677777899998886521110 00 000 011223455678899998 465555433
No 207
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=57.01 E-value=55 Score=32.69 Aligned_cols=59 Identities=19% Similarity=0.202 Sum_probs=35.9
Q ss_pred eeEEECCCCCceEEE-EecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFL-SNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV-~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. +++ ...+|.|+++++. .+. .+. .. +. ..-+.....++|+| +|.+.++-+
T Consensus 174 ~~~~~~pdg~--~lasg~~dg~i~iwd~~-~~~--~~~----~~-~~------~~h~~~v~~l~fs~----~g~~l~s~~ 233 (343)
T 3lrv_A 174 SSGVLHKDSL--LLALYSPDGILDVYNLS-SPD--QAS----SR-FP------VDEEAKIKEVKFAD----NGYWMVVEC 233 (343)
T ss_dssp CEEEECTTSC--EEEEECTTSCEEEEESS-CTT--SCC----EE-CC------CCTTSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEECCCCC--EEEEEcCCCEEEEEECC-CCC--CCc----cE-Ee------ccCCCCEEEEEEeC----CCCEEEEEe
Confidence 6889999994 555 4789999999753 221 110 00 11 11245678999998 565555433
No 208
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=56.89 E-value=96 Score=32.11 Aligned_cols=58 Identities=14% Similarity=0.108 Sum_probs=36.8
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. .++.+..+|.|+++++ +. ++.++ ....-+.....++|+| +|...++-+
T Consensus 154 ~~v~~~~~~~-~l~sgs~D~~i~iwd~-~~--~~~~~-------------~~~~h~~~V~~v~~~p----~~~~l~s~s 211 (410)
T 1vyh_C 154 QDISFDHSGK-LLASCSADMTIKLWDF-QG--FECIR-------------TMHGHDHNVSSVSIMP----NGDHIVSAS 211 (410)
T ss_dssp EEEEECTTSS-EEEEEETTSCCCEEET-TS--SCEEE-------------CCCCCSSCEEEEEECS----SSSEEEEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeC-CC--CceeE-------------EEcCCCCCEEEEEEeC----CCCEEEEEe
Confidence 6789999985 6777778999999875 21 11211 1112345678999998 455545433
No 209
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=56.74 E-value=90 Score=37.01 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=21.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|||. +|.++...+.|+++++
T Consensus 382 ~~~~~SpDG~-~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 382 FAMGVDRNGK-FAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred eeeEECCCCC-EEEEECCCCeEEEEEC
Confidence 6789999995 6777888899999875
No 210
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=56.63 E-value=1.7e+02 Score=32.69 Aligned_cols=35 Identities=3% Similarity=-0.004 Sum_probs=27.2
Q ss_pred EEEEEecCce-eeEEEC----CCCCceEEEEec-CceEEEEe
Q 005419 203 CLEKVGTGAY-LNMVPH----PDGSNRVFLSNQ-DGKTWLAT 238 (697)
Q Consensus 203 ~le~va~Gl~-~~m~~~----pDGs~RlfV~Eq-~G~V~~~~ 238 (697)
.+.+|..|.. ..|+++ |||. ++||+.. .+.|.+++
T Consensus 232 ~v~~i~~G~~P~~ia~s~~~~pDGk-~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 232 TVAEIKIGSEARSIETSKMEGWEDK-YAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTT-EEEEEEEETTEEEEEE
T ss_pred EeEEEecCCCCceeEEccccCCCCC-EEEEEEccCCeEEEEE
Confidence 4556666777 899999 6996 7998876 68888876
No 211
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=56.52 E-value=52 Score=36.67 Aligned_cols=25 Identities=20% Similarity=0.417 Sum_probs=19.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++++|||. +|+++.. |.||++++
T Consensus 112 ~~~~~SpDg~-~l~~~~~-~~i~~~d~ 136 (741)
T 2ecf_A 112 VDYQWSPDAQ-RLLFPLG-GELYLYDL 136 (741)
T ss_dssp CCCEECTTSS-EEEEEET-TEEEEEES
T ss_pred ceeEECCCCC-EEEEEeC-CcEEEEEC
Confidence 5789999995 4555554 99999875
No 212
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.30 E-value=2.4e+02 Score=32.13 Aligned_cols=21 Identities=14% Similarity=0.385 Sum_probs=17.0
Q ss_pred eeeeEeCCCCCcCCeEEEEEeecC
Q 005419 271 MMGIAFHPNFQQNGRFFVSFNCDK 294 (697)
Q Consensus 271 LLGiAfhPdF~~NG~~YvsYs~~~ 294 (697)
.=||++|| .+|.+|+..|...
T Consensus 386 pEgi~~~p---~~g~vY~a~Tn~~ 406 (592)
T 3zwu_A 386 PEWIVVSP---KDGQVYCTLTNNA 406 (592)
T ss_dssp EEEEEECT---TTCCEEEEECCBT
T ss_pred cceeEEcC---CCCEEEEEecCCc
Confidence 46899998 5899999998654
No 213
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=55.24 E-value=1.6e+02 Score=30.02 Aligned_cols=57 Identities=9% Similarity=0.126 Sum_probs=37.0
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..|+++|||. .++++..+|.|+++++.. ++.+ ............++|+|+ +..++++
T Consensus 221 ~~~~~~~~~~-~l~s~~~d~~v~iwd~~~---~~~~-------------~~~~~~~~~v~~~~~~p~---~~~ll~~ 277 (401)
T 4aez_A 221 CGLAWRSDGL-QLASGGNDNVVQIWDARS---SIPK-------------FTKTNHNAAVKAVAWCPW---QSNLLAT 277 (401)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTC---SSEE-------------EEECCCSSCCCEEEECTT---STTEEEE
T ss_pred eEEEEcCCCC-EEEEEeCCCeEEEccCCC---CCcc-------------EEecCCcceEEEEEECCC---CCCEEEE
Confidence 7899999985 677778899999987522 1111 011223456789999984 3345554
No 214
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=54.13 E-value=1.6e+02 Score=28.40 Aligned_cols=26 Identities=27% Similarity=0.367 Sum_probs=21.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..|+++|||. .++.+..+|.|+++++
T Consensus 219 ~~~~~s~~~~-~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 219 NTVTVSPDGS-LCASGGKDGQAMLWDL 244 (340)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEET
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEEe
Confidence 6789999995 5666778999999875
No 215
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=53.89 E-value=66 Score=36.70 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=38.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..|+++|||. +++.+..+|.|+++++.. ++++.+ ...........+++|+|+ .++.+.++-+
T Consensus 13 ~~l~~s~dg~-~latg~~dg~I~vwd~~~-~~~~~~-------------~~l~~h~~~V~~l~~s~~--~~~~~l~s~s 74 (753)
T 3jro_A 13 HDAVLDYYGK-RLATCSSDKTIKIFEVEG-ETHKLI-------------DTLTGHEGPVWRVDWAHP--KFGTILASCS 74 (753)
T ss_dssp EEECCCSSSC-CEEEEETTTEEEEEEEET-TEEEEE-------------EEECCCSSCEEEEEECCT--TSCSEEEEEE
T ss_pred EEEEECCCCC-eEEEEECCCcEEEEecCC-CCCccc-------------eeccCCcCceEEEEecCC--CCCCEEEEEe
Confidence 6788999995 688888899999887531 221111 111233556889999874 2355555443
No 216
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=53.89 E-value=97 Score=30.11 Aligned_cols=64 Identities=11% Similarity=0.150 Sum_probs=36.0
Q ss_pred EECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 216 VPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 216 ~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
++.|||. .++.+..+|.|+++++.. +. ..+. .+.. ...........++|+|.|..++.+.++-+
T Consensus 124 ~~s~~~~-~l~~~~~d~~i~vwd~~~-~~-~~~~--------~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 124 GIGEGAP-EIVTGSRDGTVKVWDPRQ-KD-DPVA--------NMEP-VQGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp GCC-CCC-EEEEEETTSCEEEECTTS-CS-SCSE--------EECC-CTTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred ccCCCcc-EEEEEeCCCeEEEEeCCC-CC-Ccce--------eccc-cCCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 4578885 677778899999987522 21 0110 0000 00111346788998888887887666543
No 217
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=53.30 E-value=74 Score=30.96 Aligned_cols=53 Identities=11% Similarity=0.073 Sum_probs=34.4
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..+++.|||. .++++..+|.|+++++.. +... . + .............++|+|+
T Consensus 15 ~~~~~s~~~~-~l~~~~~d~~v~iw~~~~-~~~~-~------~-----~~~~~~~~~~v~~~~~~~~ 67 (342)
T 1yfq_A 15 SDIKIIPSKS-LLLITSWDGSLTVYKFDI-QAKN-V------D-----LLQSLRYKHPLLCCNFIDN 67 (342)
T ss_dssp EEEEEEGGGT-EEEEEETTSEEEEEEEET-TTTE-E------E-----EEEEEECSSCEEEEEEEES
T ss_pred EEEEEcCCCC-EEEEEcCCCeEEEEEeCC-CCcc-c------c-----ceeeeecCCceEEEEECCC
Confidence 6789999985 677788899999987532 2100 0 0 0112234567889999984
No 218
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=53.21 E-value=81 Score=32.28 Aligned_cols=26 Identities=19% Similarity=0.264 Sum_probs=22.0
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..|+++||+. .++++..+|.|+++++
T Consensus 115 ~~~~~~~~~~-~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 115 TQITMIPNFD-AFAVSSKDGQIIVLKV 140 (437)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCC-EEEEEeCCCEEEEEEe
Confidence 6899999885 6888888999998875
No 219
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=53.08 E-value=1.5e+02 Score=33.04 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=34.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++|+|||. ++.++..+|.|+++++. .+ +.+ ............++|+|+
T Consensus 59 ~~~~~s~~~~-~l~~~~~dg~i~vw~~~-~~--~~~-------------~~~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 59 RAGKFIARKN-WIIVGSDDFRIRVFNYN-TG--EKV-------------VDFEAHPDYIRSIAVHPT 108 (814)
T ss_dssp EEEEEEGGGT-EEEEEETTSEEEEEETT-TC--CEE-------------EEEECCSSCEEEEEECSS
T ss_pred EEEEEeCCCC-EEEEEeCCCeEEEEECC-CC--cEE-------------EEEecCCCCEEEEEEeCC
Confidence 7899999995 68888889999998752 22 221 111223456889999984
No 220
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=52.21 E-value=14 Score=37.53 Aligned_cols=30 Identities=10% Similarity=0.197 Sum_probs=26.1
Q ss_pred CCceeeEEEcCCCcEEEEecCeEEEEecCC
Q 005419 612 LGFITSFGQDNRKDIYLLASNGVYRVVRPS 641 (697)
Q Consensus 612 ~grI~sf~ed~dGeLYvlts~gIYRIv~ps 641 (697)
+..+.+|+.+|+|.||...++.+||+.+++
T Consensus 40 w~~~~~laf~P~G~LYaV~~G~Ly~~~~~t 69 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGVLNDKIYKGTPPT 69 (236)
T ss_dssp CTTCSEEEECTTSCEEEEETTEEEEESCCC
T ss_pred cccceeEEECCCccEEEEeCCeEEEECCCC
Confidence 457889999999999999777799999776
No 221
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=52.12 E-value=1.1e+02 Score=36.60 Aligned_cols=58 Identities=17% Similarity=0.194 Sum_probs=38.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|||. ++..+..+|.|+++++. .+ +.+. ...........++|+| +|.+.++-+
T Consensus 619 ~~~~~s~~~~-~l~s~~~d~~i~vw~~~-~~--~~~~-------------~~~~h~~~v~~~~~s~----~~~~l~s~~ 676 (1249)
T 3sfz_A 619 YHACFSQDGQ-RIASCGADKTLQVFKAE-TG--EKLL-------------DIKAHEDEVLCCAFSS----DDSYIATCS 676 (1249)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-TC--CEEE-------------EECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECC-CC--CEEE-------------EeccCCCCEEEEEEec----CCCEEEEEe
Confidence 6899999995 67777889999998752 22 2210 1123356789999998 455545443
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=49.91 E-value=89 Score=33.88 Aligned_cols=18 Identities=22% Similarity=0.277 Sum_probs=13.4
Q ss_pred cceeeEeCCCCCe--EEEEec
Q 005419 370 HGGQILFGPEDGH--LYFMVG 388 (697)
Q Consensus 370 ~GG~L~FGP~DG~--LYis~G 388 (697)
..-.|.|.| ||. ||++..
T Consensus 371 ~P~gia~sp-Dg~~~lyv~n~ 390 (426)
T 3c75_H 371 EIDSINVSQ-DAEPLLYALSA 390 (426)
T ss_dssp EECEEEECC-SSSCEEEEEET
T ss_pred CcCeEEEcc-CCCEEEEEEcC
Confidence 455799999 885 777664
No 223
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=49.19 E-value=1.3e+02 Score=29.83 Aligned_cols=27 Identities=19% Similarity=0.274 Sum_probs=21.9
Q ss_pred eeEEECC-CCCceEEEEecCceEEEEecC
Q 005419 213 LNMVPHP-DGSNRVFLSNQDGKTWLATVP 240 (697)
Q Consensus 213 ~~m~~~p-DGs~RlfV~Eq~G~V~~~~~p 240 (697)
..|+++| ||. .++.+..+|.|+++++.
T Consensus 47 ~~~~~s~~~~~-~l~~~~~dg~i~iw~~~ 74 (408)
T 4a11_B 47 NTLDIEPVEGR-YMLSGGSDGVIVLYDLE 74 (408)
T ss_dssp EEEEECTTTCC-EEEEEETTSCEEEEECC
T ss_pred EEEEEecCCCC-EEEEEcCCCeEEEEECC
Confidence 5789999 884 67777789999998753
No 224
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=48.33 E-value=2.3e+02 Score=28.52 Aligned_cols=59 Identities=20% Similarity=0.253 Sum_probs=34.5
Q ss_pred eeEEECCCCC-ceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGS-NRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs-~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..+.++|+.. +.++.+..+|.|+++++. . ++.+ .....-+.....++|+| +|..+++-+
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~-~--~~~~-------------~~~~~h~~~v~~v~~~p----~~~~l~s~s 259 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMR-S--GQCV-------------QAFETHESDVNSVRYYP----SGDAFASGS 259 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETT-T--CCEE-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECC-C--CcEE-------------EEecCCCCCeEEEEEeC----CCCEEEEEe
Confidence 4567776432 356666789999998752 2 2221 11122345678999998 455555433
No 225
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=47.75 E-value=2.3e+02 Score=28.51 Aligned_cols=57 Identities=19% Similarity=0.385 Sum_probs=33.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..+++.|+| ++++....|.|+.-. +. .++.-+ .+.......+..|+++| ++.+|+..
T Consensus 166 ~~~~~~~~~--~~~~~g~~G~~~~S~--d~-gG~tW~------------~~~~~~~~~~~~~~~~~----~g~~~~~~ 222 (327)
T 2xbg_A 166 RNLNRSPSG--EYVAVSSRGSFYSTW--EP-GQTAWE------------PHNRTTSRRLHNMGFTP----DGRLWMIV 222 (327)
T ss_dssp EEEEECTTS--CEEEEETTSSEEEEE--CT-TCSSCE------------EEECCSSSCEEEEEECT----TSCEEEEE
T ss_pred EEEEEcCCC--cEEEEECCCcEEEEe--CC-CCCcee------------ECCCCCCCccceeEECC----CCCEEEEe
Confidence 567778876 688777788887653 22 122211 11122345778888876 56777653
No 226
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=47.49 E-value=2.4e+02 Score=33.55 Aligned_cols=59 Identities=14% Similarity=0.061 Sum_probs=37.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsY 290 (697)
..++++|||. .+..+..+|.|+++++. . ++.+ ............++|+|+ .++.+.++-
T Consensus 661 ~~~~~s~~~~-~l~s~~~d~~v~vwd~~-~--~~~~-------------~~~~~~~~~v~~~~~~~~--~~~~~l~sg 719 (1249)
T 3sfz_A 661 LCCAFSSDDS-YIATCSADKKVKIWDSA-T--GKLV-------------HTYDEHSEQVNCCHFTNK--SNHLLLATG 719 (1249)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETT-T--CCEE-------------EEEECCSSCEEEEEECSS--SSCCEEEEE
T ss_pred EEEEEecCCC-EEEEEeCCCeEEEEECC-C--CceE-------------EEEcCCCCcEEEEEEecC--CCceEEEEE
Confidence 7899999995 67777789999998752 2 2222 112234566788999984 234444443
No 227
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=46.36 E-value=46 Score=32.52 Aligned_cols=59 Identities=17% Similarity=0.242 Sum_probs=38.9
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEee
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNC 292 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs~ 292 (697)
..|+++|||. .++.+..+|.|+++++.. ++.+. .....+.....++|+| +|.+.++-+.
T Consensus 277 ~~~~~sp~~~-~l~s~~~dg~i~iwd~~~---~~~~~-------------~~~~~~~~v~~~~~s~----~g~~l~~~s~ 335 (368)
T 3mmy_A 277 NGIAFHPVHG-TLATVGSDGRFSFWDKDA---RTKLK-------------TSEQLDQPISACCFNH----NGNIFAYASS 335 (368)
T ss_dssp EEEEECTTTC-CEEEEETTSCEEEEETTT---TEEEE-------------ECCCCSSCEEEEEECT----TSSCEEEEEC
T ss_pred EEEEEecCCC-EEEEEccCCeEEEEECCC---CcEEE-------------EecCCCCCceEEEECC----CCCeEEEEec
Confidence 5789999995 677777899999997531 22221 1112345688999998 5655555443
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=45.67 E-value=40 Score=35.81 Aligned_cols=71 Identities=10% Similarity=-0.023 Sum_probs=44.7
Q ss_pred CcEEEEEecCceeeEEECCCCCceEEEEe----------cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccC--
Q 005419 201 GLCLEKVGTGAYLNMVPHPDGSNRVFLSN----------QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVE-- 268 (697)
Q Consensus 201 G~~le~va~Gl~~~m~~~pDGs~RlfV~E----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e-- 268 (697)
+=.+..|..|..-.++++|||. ++||+. +.+.|.+++. . +++.+ ..+...+.
T Consensus 56 ~~v~~~i~vG~~P~i~~spDg~-~lyVan~~~~r~~~G~~~~~VsviD~-~--T~~vv------------~~I~v~~~~~ 119 (368)
T 1mda_H 56 GVTLGHSLGAFLSLAVAGHSGS-DFALASTSFARSAKGKRTDYVEVFDP-V--TFLPI------------ADIELPDAPR 119 (368)
T ss_dssp TEEEEEEEECTTCEEEECTTSS-CEEEEEEEETTTTSSSEEEEEEEECT-T--TCCEE------------EEEEETTSCS
T ss_pred CeEEEEEeCCCCCceEECCCCC-EEEEEcccccccccCCCCCEEEEEEC-C--CCCEE------------EEEECCCccc
Confidence 3345556655545899999996 899996 5688998863 2 22221 12222211
Q ss_pred ----CceeeeEeCCCCCcCCeEEEEE
Q 005419 269 ----LGMMGIAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 269 ----~GLLGiAfhPdF~~NG~~YvsY 290 (697)
....+|+|+|| ..++||..
T Consensus 120 ~~~g~~P~~ia~SpD---Gk~lyVan 142 (368)
T 1mda_H 120 FSVGPRVHIIGNCAS---SACLLFFL 142 (368)
T ss_dssp CCBSCCTTSEEECTT---SSCEEEEE
T ss_pred cccCCCcceEEEcCC---CCEEEEEc
Confidence 23578999984 45799974
No 229
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=45.46 E-value=1e+02 Score=35.09 Aligned_cols=54 Identities=15% Similarity=0.074 Sum_probs=31.4
Q ss_pred ccCCCCccceeeEeCCCCCeEEEEecCCCCCCCCccccccccCCCceEEEEecCC
Q 005419 363 GLHFTSHHGGQILFGPEDGHLYFMVGDGEGRGDPYNFSQNKKSLLGKIMRLDVDK 417 (697)
Q Consensus 363 ~~P~~~H~GG~L~FGP~DG~LYis~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 417 (697)
+++...-+.+.+...+ ||.||+++-+|-..-||.....+.....=.|-+|.+++
T Consensus 622 Gl~~~~f~~~~~~~~~-~G~l~~g~~~Gl~~f~p~~~~~~~~~~~v~it~~~v~~ 675 (781)
T 3v9f_A 622 NIPQGSFISGCVTKDH-NGLIYFGSINGLCFFNPDIAINSPQIPPVVITKVRIPG 675 (781)
T ss_dssp TCCSSCEEEEEEEECT-TSCEEEEETTEEEEECSCCGGGSSCCCCCEEEEEECCC
T ss_pred CccccccccCceEECC-CCEEEEECCCceEEEChhhccccCCCCCEEEEEEEECC
Confidence 3444434456788888 99999999887554455333233222333344555655
No 230
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=45.34 E-value=52 Score=37.55 Aligned_cols=101 Identities=25% Similarity=0.364 Sum_probs=51.5
Q ss_pred eeEeCCCCCeEEEEecCCCCCC---CCcccc-ccccCCCceEEEEecCCCCcccccccccCCCCccCCCCCCCCCCCC--
Q 005419 373 QILFGPEDGHLYFMVGDGEGRG---DPYNFS-QNKKSLLGKIMRLDVDKIPSAKEISDLGLWGNYSIPADNPYSEDKQ-- 446 (697)
Q Consensus 373 ~L~FGP~DG~LYis~GDgg~~~---DP~~~a-Qn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~-- 446 (697)
.|.+.|.||.+|+++=+++..+ .+.+.+ .......|-|+|+++++.... .....|-.|- -..+|-.....
T Consensus 388 gi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~---a~~f~w~~~v-~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 388 WIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHA---SKTFAWDLFV-VAGNPSVHAGTPK 463 (592)
T ss_dssp EEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTT---CSEEEEEEEE-ECCCTTTSTTSGG
T ss_pred eeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccc---cceeEEEEEE-eccCccccccccc
Confidence 4778887999999975544321 121111 112456899999998762111 1111222221 11222111100
Q ss_pred -CCCeEE-EeccccceeeeecCCCCCeEEEEEcCC
Q 005419 447 -LQPEIW-ALGFRNPWRCSFDAERPSYFLCADVGQ 479 (697)
Q Consensus 447 -~~pEI~-A~GlRNP~r~sfDp~~g~~L~~~DvG~ 479 (697)
...++. .-+|.||=.++||+. | +||+.+=|.
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~-G-~LwI~eDg~ 496 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKA-G-RLWILTDGD 496 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTT-C-CEEEEECCC
T ss_pred ccccccCCCCCccCCcceEECCC-C-CEEEEecCC
Confidence 000111 124789999999997 4 488776543
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=43.85 E-value=23 Score=36.49 Aligned_cols=60 Identities=22% Similarity=0.419 Sum_probs=37.5
Q ss_pred EEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCccc---ce---eeccCCceeeeEeCCCCCcCCeEE
Q 005419 215 MVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLTD---QV---HADVELGMMGIAFHPNFQQNGRFF 287 (697)
Q Consensus 215 m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~---~V---~~~~e~GLLGiAfhPdF~~NG~~Y 287 (697)
|.+. || ++|+.. +...|.+++ |+. |+.+. .+|++. .. ....+.-|-|||++| ...+||
T Consensus 186 Le~~-dG--~lyanvw~s~~I~vID-p~T--G~V~~------~Idl~~L~~~~~~~~~~~~~vlNGIA~dp---~~~rlf 250 (268)
T 3nok_A 186 LECA-NG--VIYANIWHSSDVLEID-PAT--GTVVG------VIDASALTRAVAGQVTNPEAVLNGIAVEP---GSGRIF 250 (268)
T ss_dssp EEEE-TT--EEEEEETTCSEEEEEC-TTT--CBEEE------EEECHHHHHHHTTTCCCTTCCEEEEEECT---TTCCEE
T ss_pred cEEe-CC--EEEEEECCCCeEEEEe-CCC--CcEEE------EEECCCCcccccccccCcCCceEEEEEcC---CCCEEE
Confidence 4555 67 799988 578898886 554 33332 133321 11 122345789999998 467899
Q ss_pred EE
Q 005419 288 VS 289 (697)
Q Consensus 288 vs 289 (697)
|.
T Consensus 251 VT 252 (268)
T 3nok_A 251 MT 252 (268)
T ss_dssp EE
T ss_pred Ee
Confidence 94
No 232
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=43.60 E-value=2.5e+02 Score=27.65 Aligned_cols=59 Identities=10% Similarity=-0.060 Sum_probs=36.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEE
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFV 288 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yv 288 (697)
..|++.|++.+.++.+..+|.|+++++.. ++.+. ..........++++|.-....++++
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNT---LQTAD--------------VFNFEETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTT---TEEEE--------------EEECSSCEEEEEECSSCSSCCEEEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCC---Cccce--------------eccCCCceeeeEeecCCCCCcEEEE
Confidence 68899996555677777899999987521 11110 1123445678889886543334433
No 233
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=43.18 E-value=29 Score=35.80 Aligned_cols=61 Identities=11% Similarity=0.187 Sum_probs=38.4
Q ss_pred EEEEEecCceeeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 203 CLEKVGTGAYLNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 203 ~le~va~Gl~~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
.+..+..|-.+.|+++|||. +||++.+ +.|.+++. +.+.-+.+ ..+ ..-..+..+|+|+|+
T Consensus 298 ~v~~i~~~~p~~ia~spdg~-~l~v~n~-~~v~v~D~-~t~~l~~~------------~~i-~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 298 RVARIPGRDALSMTIDQQRN-LMLTLDG-GNVNVYDI-SQPEPKLL------------RTI-EGAAEASLQVQFHPV 358 (361)
T ss_dssp EEEEEECTTCCEEEEETTTT-EEEEECS-SCEEEEEC-SSSSCEEE------------EEE-TTSCSSEEEEEECCC
T ss_pred EEEEEecCCeeEEEECCCCC-EEEEeCC-CeEEEEEC-CCCcceee------------EEe-ccCCCCcEEEEecCC
Confidence 34444433368999999997 8999998 99999863 22200221 111 122356789999994
No 234
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=42.90 E-value=2.7e+02 Score=31.63 Aligned_cols=52 Identities=15% Similarity=0.292 Sum_probs=34.6
Q ss_pred eeEEECCC--CCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPD--GSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++++|+ |. .++++..+|.|+++++.. +. .. ..............++|+|.
T Consensus 103 ~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~-~~--~~-----------~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 103 NSVQWAPHEYGP-LLLVASSDGKVSVVEFKE-NG--TT-----------SPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEECCS-SS--CC-----------CCEEEECCSSCEEEEEECCC
T ss_pred EEEEECCCCCCC-EEEEEeCCCcEEEEEeec-CC--Cc-----------ceeEeecCCCceEEEEecCc
Confidence 68899999 63 688888899999987532 21 00 01122334567899999984
No 235
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=42.86 E-value=85 Score=32.24 Aligned_cols=73 Identities=8% Similarity=-0.057 Sum_probs=41.3
Q ss_pred EEEEecCceeeEEECCCCCceEEEEec----------CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceee
Q 005419 204 LEKVGTGAYLNMVPHPDGSNRVFLSNQ----------DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMG 273 (697)
Q Consensus 204 le~va~Gl~~~m~~~pDGs~RlfV~Eq----------~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLG 273 (697)
+..+..|..-.|+++|||. ++||++. .+.|.+++. + +++.++ . +.+... .........+
T Consensus 44 ~~~i~~g~~p~i~~spdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~-~--t~~~~~---~---i~~~~~-~~~~g~~p~~ 112 (361)
T 2oiz_A 44 LGMVPTAFNGHVQVSNDGK-KIYTMTTYHERITRGKRSDVVEVWDA-D--KLTFEK---E---ISLPPK-RVQGLNYDGL 112 (361)
T ss_dssp EEEEECCEEEEEEECTTSS-EEEEEEEEETTSSSSCEEEEEEEEET-T--TCCEEE---E---EEECTT-BCCBCCCGGG
T ss_pred EEEecCCCCCceEECCCCC-EEEEEEecccccccCCCCCEEEEEEC-c--CCcEEE---E---EEcCcc-ccccCCCcce
Confidence 3445445445899999996 8999973 566888763 2 222211 0 000000 0111234678
Q ss_pred eEeCCCCCcCCeEEEEE
Q 005419 274 IAFHPNFQQNGRFFVSF 290 (697)
Q Consensus 274 iAfhPdF~~NG~~YvsY 290 (697)
|+|+|+ ..++||+-
T Consensus 113 i~~spd---g~~l~v~n 126 (361)
T 2oiz_A 113 FRQTTD---GKFIVLQN 126 (361)
T ss_dssp EEECTT---SSEEEEEE
T ss_pred EEECCC---CCEEEEEC
Confidence 999995 34788863
No 236
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=42.65 E-value=2.6e+02 Score=27.64 Aligned_cols=64 Identities=11% Similarity=0.160 Sum_probs=34.5
Q ss_pred eeEEE-----CC-CCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeE
Q 005419 213 LNMVP-----HP-DGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRF 286 (697)
Q Consensus 213 ~~m~~-----~p-DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~ 286 (697)
..+++ .+ ||. .|+.+..+|.|+++++...... ........+...-......++|+| ++.+
T Consensus 25 ~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~---------~~~~~~~~~l~~h~~~V~~~~~~~----~~~~ 90 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQN---------GYFGIPHKALTGHNHFVSDLALSQ----ENCF 90 (343)
T ss_dssp EEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCS---------SBSEEEEEEECCCSSCEEEEEECS----STTE
T ss_pred hheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcc---------cccccccchhccCCCceEEEEECC----CCCE
Confidence 56777 66 763 5666667899998875321100 000000112223345678999998 4555
Q ss_pred EEEE
Q 005419 287 FVSF 290 (697)
Q Consensus 287 YvsY 290 (697)
.++-
T Consensus 91 l~s~ 94 (343)
T 2xzm_R 91 AISS 94 (343)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=42.62 E-value=2.2e+02 Score=27.48 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=16.4
Q ss_pred cceeeEeCCCCCeEEEEecCCC
Q 005419 370 HGGQILFGPEDGHLYFMVGDGE 391 (697)
Q Consensus 370 ~GG~L~FGP~DG~LYis~GDgg 391 (697)
....+.+++ ||.|||++-+|.
T Consensus 296 ~~~~~~~d~-~g~l~~gt~~G~ 316 (330)
T 3hxj_A 296 IIATPVIDE-NGTIYFGTRNGK 316 (330)
T ss_dssp CCSCCEECT-TCCEEEECTTSC
T ss_pred cccceEEcC-CCEEEEEcCCCe
Confidence 345688888 999999887764
No 238
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=40.66 E-value=2.2e+02 Score=29.46 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=21.1
Q ss_pred eeEEECCC---CCceEEEEecCceEEEEecC
Q 005419 213 LNMVPHPD---GSNRVFLSNQDGKTWLATVP 240 (697)
Q Consensus 213 ~~m~~~pD---Gs~RlfV~Eq~G~V~~~~~p 240 (697)
..|+++|| | ..++.+..+|.|+++++.
T Consensus 199 ~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 199 TDVHLIKDSDGH-QFIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEEEECTTSC-EEEEEEETTSCEEEEEES
T ss_pred EEEEEcCCCCCC-cEEEEEcCCCcEEEEECC
Confidence 67889999 6 356677789999998763
No 239
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=40.39 E-value=1.4e+02 Score=32.14 Aligned_cols=21 Identities=19% Similarity=0.316 Sum_probs=14.8
Q ss_pred CceeeeEeCCCCCc-CCeEEEE
Q 005419 269 LGMMGIAFHPNFQQ-NGRFFVS 289 (697)
Q Consensus 269 ~GLLGiAfhPdF~~-NG~~Yvs 289 (697)
.|..|||++|+-.. +.++|..
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~ 241 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYL 241 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEE
T ss_pred cCceEEEecCCcCCCCeEEEEE
Confidence 59999999998554 3345543
No 240
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=40.01 E-value=2.7e+02 Score=27.04 Aligned_cols=27 Identities=7% Similarity=0.051 Sum_probs=21.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..+++.|++...+..+..+|.|+++++
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 678999954446777778999999875
No 241
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=39.75 E-value=2.8e+02 Score=27.06 Aligned_cols=26 Identities=19% Similarity=0.452 Sum_probs=17.2
Q ss_pred eeEEECCCCCceEEEE-ecC--c--eEEEEec
Q 005419 213 LNMVPHPDGSNRVFLS-NQD--G--KTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~-Eq~--G--~V~~~~~ 239 (697)
..++++|||. +|+++ ++. | .||++++
T Consensus 62 ~~~~~SpDg~-~la~~~~~~~~~~~~l~~~~~ 92 (347)
T 2gop_A 62 TMPRISPDGK-KIAFMRANEEKKVSEIWVADL 92 (347)
T ss_dssp EEEEECTTSS-EEEEEEEETTTTEEEEEEEET
T ss_pred CCeEECCCCC-EEEEEEeccCCCcceEEEEEC
Confidence 5789999996 45444 433 4 4888764
No 242
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=39.57 E-value=3.9e+02 Score=29.55 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=33.7
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++++|||. +++.+..+|.|+++++.. +..+ .....-......++|+|+
T Consensus 434 ~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~---~~~~-------------~~~~~h~~~v~~~~~s~~ 483 (694)
T 3dm0_A 434 EDVVLSSDGQ-FALSGSWDGELRLWDLAA---GVST-------------RRFVGHTKDVLSVAFSLD 483 (694)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT---TEEE-------------EEEECCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECCC---Ccce-------------eEEeCCCCCEEEEEEeCC
Confidence 6789999995 566777899999997522 2111 112233456789999983
No 243
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=39.47 E-value=3.2e+02 Score=28.88 Aligned_cols=27 Identities=11% Similarity=-0.007 Sum_probs=23.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..+++.|||..+++.+..+|.|+++++
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~ 190 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQG 190 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeC
Confidence 689999999767888888999999874
No 244
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=38.71 E-value=1.3e+02 Score=29.72 Aligned_cols=24 Identities=13% Similarity=0.091 Sum_probs=16.2
Q ss_pred CCceeeeEeCCCCCcCCeEEEEEe
Q 005419 268 ELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 268 e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
.....+++|+|+...++.+.++-+
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEE
T ss_pred CCceEEEEecCCCCCCCceEEEEc
Confidence 345789999997654455656544
No 245
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=37.88 E-value=46 Score=36.12 Aligned_cols=26 Identities=4% Similarity=-0.212 Sum_probs=21.4
Q ss_pred eeEEECCCCCceEEEEecCc--eEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDG--KTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G--~V~~~~~ 239 (697)
..++|+|||. +|+..++.| .||++++
T Consensus 198 ~~~~~SpDG~-~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 198 SSASISPGMK-VTAGLETAREARLVTVDP 225 (582)
T ss_dssp EEEEECTTSC-EEEEEECSSCEEEEEECT
T ss_pred ccceECCCCC-EEEEccCCCeeEEEEEcC
Confidence 7899999996 677777888 8998864
No 246
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=37.55 E-value=1.3e+02 Score=34.07 Aligned_cols=26 Identities=15% Similarity=0.210 Sum_probs=18.1
Q ss_pred eeEEECCCCCceE-EEEecCc----eEEEEec
Q 005419 213 LNMVPHPDGSNRV-FLSNQDG----KTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~Rl-fV~Eq~G----~V~~~~~ 239 (697)
..++++|||. +| |..++.| .||++++
T Consensus 166 ~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl 196 (741)
T 1yr2_A 166 DAWAASDDGR-LLAYSVQDGGSDWRTVKFVGV 196 (741)
T ss_dssp EEEEECTTSS-EEEEEEEETTCSEEEEEEEET
T ss_pred EeEEECCCCC-EEEEEEcCCCCceEEEEEEEC
Confidence 4788999996 44 4445555 4888875
No 247
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=37.26 E-value=3.4e+02 Score=27.37 Aligned_cols=59 Identities=15% Similarity=0.186 Sum_probs=34.9
Q ss_pred eeEEECC-CCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHP-DGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~p-DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..+.+.+ ++ +.+.....+|.|+++++...+ ..+ .....-+.....++|+| +|..+++-+
T Consensus 209 ~~~~~~~~~~-~~l~sgs~D~~v~~wd~~~~~--~~~-------------~~~~~h~~~v~~v~~~p----~~~~l~s~s 268 (380)
T 3iz6_a 209 LSLSINSLNA-NMFISGSCDTTVRLWDLRITS--RAV-------------RTYHGHEGDINSVKFFP----DGQRFGTGS 268 (380)
T ss_dssp EEEEECSSSC-CEEEEEETTSCEEEEETTTTC--CCC-------------EEECCCSSCCCEEEECT----TSSEEEEEC
T ss_pred EEEEeecCCC-CEEEEEECCCeEEEEECCCCC--cce-------------EEECCcCCCeEEEEEec----CCCeEEEEc
Confidence 5677776 55 345556679999998752211 111 12223345678999999 466655544
No 248
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=37.04 E-value=2.9e+02 Score=26.48 Aligned_cols=76 Identities=9% Similarity=0.141 Sum_probs=42.6
Q ss_pred CcEEEEEecCce---eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY---LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
-+.+.....|=. ..++++||+.+.|+-+..+|.|+++++.. +.... .+...+...-......++|+
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~-~~~~~----------~~~~~~l~~h~~~V~~~~~s 95 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTR-DETNY----------GIPQRALRGHSHFVSDVVIS 95 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECC-SSSCS----------EEEEEEECCCSSCEEEEEEC
T ss_pred ceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC-CCccc----------ceeeEEEeCCCCCEEEEEEC
Confidence 344444444533 78999999654455566899999887632 21000 00011222334568899999
Q ss_pred CCCCcCCeEEEEEe
Q 005419 278 PNFQQNGRFFVSFN 291 (697)
Q Consensus 278 PdF~~NG~~YvsYs 291 (697)
| +|.+.++-+
T Consensus 96 ~----dg~~l~s~~ 105 (340)
T 4aow_A 96 S----DGQFALSGS 105 (340)
T ss_dssp T----TSSEEEEEE
T ss_pred C----CCCEEEEEc
Confidence 8 455555433
No 249
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=36.78 E-value=71 Score=35.41 Aligned_cols=62 Identities=13% Similarity=0.044 Sum_probs=41.3
Q ss_pred eeEEECCCCCceEEEEec-CceEEEEecCCCCCCCcccccCCCCccCcccceeeccC-------------CceeeeEeCC
Q 005419 213 LNMVPHPDGSNRVFLSNQ-DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVE-------------LGMMGIAFHP 278 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e-------------~GLLGiAfhP 278 (697)
.++..+|||. +|||+.+ .|.|.++++.+.+..+.+ ..|..++. .|.-+|++.|
T Consensus 324 a~I~lS~DGr-fLYVSnrg~d~VavfdV~d~~~~~lv------------~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp 390 (462)
T 2ece_A 324 TDIDISLDDK-FLYLSLWGIGEVRQYDISNPFKPVLT------------GKVKLGGIFHRADHPAGHKLTGAPQMLEISR 390 (462)
T ss_dssp CCEEECTTSC-EEEEEETTTTEEEEEECSSTTSCEEE------------EEEECBTTTTCBCCTTSCCCCSCCCCEEECT
T ss_pred eEEEECCCCC-EEEEEeCCCCEEEEEEecCCCCcEEE------------EEEEeCCeeccccccccccCCCCCCEEEEcC
Confidence 6788999995 8999998 689999886433222111 22333322 3678899998
Q ss_pred CCCcCCeEEEEE
Q 005419 279 NFQQNGRFFVSF 290 (697)
Q Consensus 279 dF~~NG~~YvsY 290 (697)
| ..++||.-
T Consensus 391 D---Gk~LyVaN 399 (462)
T 2ece_A 391 D---GRRVYVTN 399 (462)
T ss_dssp T---SSEEEEEC
T ss_pred C---CCEEEEEc
Confidence 4 34788865
No 250
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=35.40 E-value=2.3e+02 Score=31.70 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=18.6
Q ss_pred eeEEECCCCCceE-EEEecCc----eEEEEec
Q 005419 213 LNMVPHPDGSNRV-FLSNQDG----KTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~Rl-fV~Eq~G----~V~~~~~ 239 (697)
..++++|||. +| |..++.| .||++++
T Consensus 128 ~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 128 RGYAFSEDGE-YFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EEEEECTTSS-EEEEEEEETTCSCEEEEEEET
T ss_pred EEEEECCCCC-EEEEEEcCCCCceEEEEEEEC
Confidence 4788999996 44 4445555 7998875
No 251
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=35.04 E-value=3e+02 Score=32.24 Aligned_cols=26 Identities=4% Similarity=0.000 Sum_probs=21.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..|+|+|||. .|.++..+|.|++++.
T Consensus 21 ~~lafspdg~-~lAsgs~Dg~I~lw~~ 46 (902)
T 2oaj_A 21 IAAAFDFTQN-LLAIATVTGEVHIYGQ 46 (902)
T ss_dssp EEEEEETTTT-EEEEEETTSEEEEECS
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeC
Confidence 7899999995 5666778999999863
No 252
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=33.17 E-value=2.7e+02 Score=32.60 Aligned_cols=26 Identities=12% Similarity=0.022 Sum_probs=21.7
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
+.++|+|||. .|-++..+|.|+++++
T Consensus 492 ~svafspdg~-~LAsgs~DgtV~lwd~ 517 (902)
T 2oaj_A 492 DKISFAAETL-ELAVSIETGDVVLFKY 517 (902)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEEE
T ss_pred eEEEecCCCC-eEEEEecCcEEEEEEe
Confidence 7899999995 5667778999998876
No 253
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=31.20 E-value=68 Score=33.99 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=37.5
Q ss_pred EEEEEecCce-eeEEECCCCCceEEEEec--CceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 203 CLEKVGTGAY-LNMVPHPDGSNRVFLSNQ--DGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 203 ~le~va~Gl~-~~m~~~pDGs~RlfV~Eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
.+..|..|-. ++|+++|||. ++||+.+ .+.|.+++. + +++.++ .+ .-.++-.||++|++
T Consensus 306 vv~~i~vg~~p~gi~~s~Dg~-~l~va~~~~~~~VsVID~-~--t~kvv~------------~I--~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 306 TSGPISNGHDSDAIIAAQDGA-SDNYANSAGTEVLDIYDA-A--SDQDQS------------SV--ELDKGPESLSVQNE 367 (368)
T ss_dssp EEECCEEEEEECEEEECCSSS-CEEEEEETTTTEEEEEES-S--SCEEEE------------EC--CCCSCCCEEECCCC
T ss_pred EEEEEECCCCcceEEECCCCC-EEEEEccCCCCeEEEEEC-C--CCcEEE------------EE--ECCCCCCEEEeecC
Confidence 3444544545 8999999996 5777775 799999874 2 222221 11 12356788998864
No 254
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=30.27 E-value=1.5e+02 Score=28.05 Aligned_cols=60 Identities=18% Similarity=0.113 Sum_probs=37.7
Q ss_pred CcEEEEEecCce---eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY---LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
++.+.....|-. ..|++ |||. +++.+..+|.|+++++.. + +.+ .+....+.....++|+
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~-~l~s~~~dg~v~vw~~~~-~--~~~-------------~~~~~~~~~v~~~~~~ 68 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDS-KVASVSRDGTVRLWSKDD-Q--WLG-------------TVVYTGQGFLNSVCYD 68 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETT-EEEEEETTSEEEEEEESS-S--EEE-------------EEEEECSSCEEEEEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCC-EEEEEEcCCcEEEEECCC-C--EEE-------------EEeecCCccEEEEEEC
Confidence 344444444433 67888 8885 788888999999987522 1 111 1222345678899999
Q ss_pred C
Q 005419 278 P 278 (697)
Q Consensus 278 P 278 (697)
|
T Consensus 69 ~ 69 (313)
T 3odt_A 69 S 69 (313)
T ss_dssp T
T ss_pred C
Confidence 8
No 255
>3qnt_A Niemann-PICK C1-like protein 1; cholesterol transport protein, transport protein; HET: NAG; 2.83A {Homo sapiens}
Probab=29.85 E-value=16 Score=37.73 Aligned_cols=109 Identities=14% Similarity=0.360 Sum_probs=69.9
Q ss_pred CCCCCCCCCCCCCCe-----eecc--CC--CC-ccCCchhhHHHHHHhHHhc---cCChhhHhhhhhcccc-ccccCccc
Q 005419 26 LCTNLRAPFTPKAPL-----AFCQ--YN--GS-VCCNSTEDQQLQNQFKAMN---VSDSGCASLLKSIRCS-RCDQFSSE 91 (697)
Q Consensus 26 ~c~d~~~p~~~~~~l-----~fC~--y~--~~-~cc~~~~d~~~~~~~~~~~---~~~~~C~~~~~~ilc~-~c~p~~a~ 91 (697)
-|.+..+|..++..+ +.|+ +. +. .||+..+-..|+++++... ..=..|..=++.+.|+ .|||.= .
T Consensus 37 ~C~~n~~a~~~~~~~~~~L~~~Cp~~~~~~~~~~CC~~~Ql~~L~~nl~~a~~il~rCPaC~~Nf~~lfC~~TCSP~Q-S 115 (265)
T 3qnt_A 37 SCLSNTPARKITGDHLILLQKICPRLYTGPNTQACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQ-S 115 (265)
T ss_dssp EEECCCBCEECCHHHHHHHHHHSGGGCCSSSCEESCCHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHCTTG-G
T ss_pred cCCCCCcCCCCCHHHHHHHHHhChHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHhcCCCCCCCc-c
Confidence 499999887766332 3896 43 33 7999999999999988743 3568899999999998 699994 4
Q ss_pred ccccCCCCcccccccCCCccCCccccccccccchHHHhhcccCcccc
Q 005419 92 LYRVESKPKKVPVLCNSTVSANSTQSQRAAINFCSKVWDECHNVSIS 138 (697)
Q Consensus 92 l~~~~~~~~~~p~lc~~~~~~~~~~~~~~~~~yc~~~~~~c~~~~~~ 138 (697)
+|=.-+.....- ......-..-.-....+|=..+|+.|++|..+
T Consensus 116 ~Fl~vt~t~~~~---~~~~~~V~eldy~i~~~fa~~~YdSCKdV~~p 159 (265)
T 3qnt_A 116 LFINVTRVAQLG---AGQLPAVVAYEAFYQHSFAEQSYDSCSRVRVP 159 (265)
T ss_dssp GTEEEEEEECCS---SSSCCEEEEEEEEEEHHHHHHHHHHHTTCBCT
T ss_pred cceeeEeecccC---CCCcceEEEEEEEECHHHhhhHhhhhcCcccc
Confidence 443222111000 00000000001126779999999999998643
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=28.99 E-value=1.2e+02 Score=30.63 Aligned_cols=60 Identities=20% Similarity=0.368 Sum_probs=36.3
Q ss_pred EEECCCCCceEEEEe-cCceEEEEecCCCCCCCcccccCCCCccCcc---ccee---eccCCceeeeEeCCCCCcCCeEE
Q 005419 215 MVPHPDGSNRVFLSN-QDGKTWLATVPEPGSGSKLELDESNPFLDLT---DQVH---ADVELGMMGIAFHPNFQQNGRFF 287 (697)
Q Consensus 215 m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~---~~V~---~~~e~GLLGiAfhPdF~~NG~~Y 287 (697)
|.+. || ++|+.. +...|.+++ |+. |+.+. -+|++ +... ...+.-|-|||+|| .+++||
T Consensus 155 Le~~-~G--~lyanvw~s~~I~vID-p~t--G~V~~------~idl~~l~~~~~~~~~~~~~vlNGIA~d~---~~~~lf 219 (243)
T 3mbr_X 155 LEWV-NG--ELLANVWLTSRIARID-PAS--GKVVA------WIDLQALVPDADALTDSTNDVLNGIAFDA---EHDRLF 219 (243)
T ss_dssp EEEE-TT--EEEEEETTTTEEEEEC-TTT--CBEEE------EEECGGGSTTTTSCCCTTSSCEEEEEEET---TTTEEE
T ss_pred eEEe-CC--EEEEEECCCCeEEEEE-CCC--CCEEE------EEECCcCccccccccCCcCCceEEEEEcC---CCCEEE
Confidence 4443 56 799888 577888886 444 33332 12322 1111 12345789999998 467899
Q ss_pred EE
Q 005419 288 VS 289 (697)
Q Consensus 288 vs 289 (697)
|.
T Consensus 220 VT 221 (243)
T 3mbr_X 220 VT 221 (243)
T ss_dssp EE
T ss_pred EE
Confidence 95
No 257
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=28.11 E-value=1.4e+02 Score=33.17 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=19.4
Q ss_pred eeEEECCCCCceEEEEec---------CceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQ---------DGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq---------~G~V~~~~~ 239 (697)
..++++|||. +|.++.. .+.||++++
T Consensus 63 ~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 63 SNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp SEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEET
T ss_pred eeEEECCCCC-eEEEEecCceeEEeecceEEEEEEC
Confidence 5789999996 5555543 588999875
No 258
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=28.09 E-value=2.1e+02 Score=29.34 Aligned_cols=70 Identities=14% Similarity=0.234 Sum_probs=42.3
Q ss_pred CcEEEEEecCce-eeEEECCCCCceEEEEe--cCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeC
Q 005419 201 GLCLEKVGTGAY-LNMVPHPDGSNRVFLSN--QDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFH 277 (697)
Q Consensus 201 G~~le~va~Gl~-~~m~~~pDGs~RlfV~E--q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfh 277 (697)
|-++..+..+.. ..+++.|++. .++++. .+|.|++++.+. ++.+. ...+-+...++|||+
T Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~d~~I~iwd~~~---~~~v~-------------~l~gH~~~V~~l~~s 373 (420)
T 4gga_A 311 GACLSAVDAHSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYPT---MAKVA-------------ELKGHTSRVLSLTMS 373 (420)
T ss_dssp TEEEEEEECSSCEEEEEEETTTT-EEEEEECTTTCCEEEEETTT---CCEEE-------------EECCCSSCEEEEEEC
T ss_pred cccceeeccccceeeeeecCCCC-eEEEEEecCCCEEEEEECCC---CcEEE-------------EEcCCCCCEEEEEEc
Confidence 444455554444 7888999985 566554 579999987632 22221 111224568899999
Q ss_pred CCCCcCCeEEEEEe
Q 005419 278 PNFQQNGRFFVSFN 291 (697)
Q Consensus 278 PdF~~NG~~YvsYs 291 (697)
| +|.+.++-+
T Consensus 374 p----dg~~l~S~s 383 (420)
T 4gga_A 374 P----DGATVASAA 383 (420)
T ss_dssp T----TSSCEEEEE
T ss_pred C----CCCEEEEEe
Confidence 8 566656544
No 259
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=27.15 E-value=3.5e+02 Score=30.17 Aligned_cols=27 Identities=15% Similarity=0.106 Sum_probs=18.5
Q ss_pred eeEEECCCCCceEEEEecCc----eEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDG----KTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G----~V~~~~~ 239 (697)
..++++|||..=+|..++.| .||++++
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 57889999963344444555 6888875
No 260
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=25.23 E-value=68 Score=36.38 Aligned_cols=24 Identities=4% Similarity=0.044 Sum_probs=19.6
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..++|.||| ++++.+ .|.|+++++
T Consensus 20 ~~~~w~~dg--~~~~~~-~~~i~~~~~ 43 (740)
T 4a5s_A 20 YSLRWISDH--EYLYKQ-ENNILVFNA 43 (740)
T ss_dssp CCEEECSSS--EEEEEE-TTEEEEEET
T ss_pred cccEECCCC--cEEEEc-CCcEEEEEC
Confidence 578999999 566666 999999874
No 261
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=23.57 E-value=4.3e+02 Score=27.75 Aligned_cols=66 Identities=9% Similarity=0.143 Sum_probs=40.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEee
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFNC 292 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs~ 292 (697)
..++|+|||. +++++..+|.|++++. . +. ..+. +........+......+|+++| ++.+.+.|+.
T Consensus 196 ~~v~wspdg~-~lasgs~dg~v~iwd~-~-~~--~~~~------~~~~~~~~~~~~~~v~~v~w~~----~~~~l~~~~~ 260 (434)
T 2oit_A 196 TSVCWSPKGK-QLAVGKQNGTVVQYLP-T-LQ--EKKV------IPCPPFYESDHPVRVLDVLWIG----TYVFAIVYAA 260 (434)
T ss_dssp EEEEECTTSS-CEEEEETTSCEEEECT-T-CC--EEEE------ECCCTTCCTTSCEEEEEEEEEE----TTEEEEEEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCcEEEEcc-C-Cc--cccc------ccCCcccCCCCceeEEEEEEec----CceEEEEEcc
Confidence 7899999985 7888889999999863 2 21 1110 0110011111122568889887 5677778775
Q ss_pred c
Q 005419 293 D 293 (697)
Q Consensus 293 ~ 293 (697)
.
T Consensus 261 ~ 261 (434)
T 2oit_A 261 A 261 (434)
T ss_dssp T
T ss_pred C
Confidence 4
No 262
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=23.33 E-value=3.5e+02 Score=28.45 Aligned_cols=51 Identities=18% Similarity=0.255 Sum_probs=33.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCC
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPN 279 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPd 279 (697)
..++|+|++.+.+..+..+|.|+++++.. + ..+ ............++|+|+
T Consensus 153 ~~v~~~p~~~~~las~s~Dg~v~iwD~~~-~--~~~-------------~~~~~~~~~v~~v~wspd 203 (434)
T 2oit_A 153 IDMKWNPTVPSMVAVCLADGSIAVLQVTE-T--VKV-------------CATLPSTVAVTSVCWSPK 203 (434)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEEESS-S--EEE-------------EEEECGGGCEEEEEECTT
T ss_pred EEEEECCCCCCEEEEEECCCeEEEEEcCC-C--cce-------------eeccCCCCceeEEEEcCC
Confidence 68999998555666678899999987532 1 111 001112346789999995
No 263
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=23.14 E-value=6.1e+02 Score=25.80 Aligned_cols=26 Identities=8% Similarity=0.111 Sum_probs=21.5
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..+++.|||. +++++..+|.|+++++
T Consensus 314 ~~~~~~~~~~-~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 314 YSTIYDHERK-RCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEET
T ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEEC
Confidence 6788999985 6778888999999875
No 264
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=22.75 E-value=2.8e+02 Score=27.17 Aligned_cols=62 Identities=10% Similarity=0.156 Sum_probs=36.2
Q ss_pred eeEEECCCC---CceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEE
Q 005419 213 LNMVPHPDG---SNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVS 289 (697)
Q Consensus 213 ~~m~~~pDG---s~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~Yvs 289 (697)
..++++||+ ...|..+..+|.|+++++.. ...... . ..+...-+.....++|+|+ |.+.++
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~-~~~~~~-----~------~~~~~~~~~~v~~v~~sp~----g~~las 279 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD-ASSNTW-----S------PKLLHKFNDVVWHVSWSIT----ANILAV 279 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEECSS-TTCCCC-----B------CCEEEECSSCEEEEEECTT----TCCEEE
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEccC-ccccch-----h------hhhhhcCCCcEEEEEEcCC----CCEEEE
Confidence 678999987 23566677899999987532 110000 0 0111222456789999984 554444
Q ss_pred E
Q 005419 290 F 290 (697)
Q Consensus 290 Y 290 (697)
-
T Consensus 280 ~ 280 (316)
T 3bg1_A 280 S 280 (316)
T ss_dssp E
T ss_pred E
Confidence 3
No 265
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=22.31 E-value=5.2e+02 Score=24.69 Aligned_cols=24 Identities=4% Similarity=0.122 Sum_probs=20.8
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..|++.|++ ++++...|.|+++++
T Consensus 154 ~~~~~~~~~---l~~~~~d~~i~i~d~ 177 (342)
T 1yfq_A 154 FTMDTNSSR---LIVGMNNSQVQWFRL 177 (342)
T ss_dssp EEEEECSSE---EEEEESTTEEEEEES
T ss_pred EEEEecCCc---EEEEeCCCeEEEEEC
Confidence 578888886 999999999999975
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=22.09 E-value=2.3e+02 Score=30.15 Aligned_cols=26 Identities=15% Similarity=0.457 Sum_probs=19.1
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
-+|+..+. +++|||+|+.-.||.++.
T Consensus 183 EgcvvDd~-~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 183 EGMAADDE-YGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp EEEEEETT-TTEEEEEETTTEEEEEEC
T ss_pred ceEEEcCC-CCeEEEecccceEEEEeC
Confidence 45666654 459999999655999874
No 267
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=22.03 E-value=1.9e+02 Score=32.02 Aligned_cols=25 Identities=8% Similarity=-0.064 Sum_probs=20.3
Q ss_pred eeEEECCCCCceEEEEecCceEEEEec
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATV 239 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 239 (697)
..+++.||| +++....+|.||++++
T Consensus 19 ~~~~~s~dg--~~~~~~~d~~i~~~~~ 43 (719)
T 1z68_A 19 FFPNWISGQ--EYLHQSADNNIVLYNI 43 (719)
T ss_dssp CCCEESSSS--EEEEECTTSCEEEEES
T ss_pred CccEECCCC--eEEEEcCCCCEEEEEc
Confidence 467899999 5777777899999874
No 268
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=21.26 E-value=6e+02 Score=26.53 Aligned_cols=22 Identities=36% Similarity=0.569 Sum_probs=17.6
Q ss_pred ccceeeEeCCCCCe--EEEEecCCC
Q 005419 369 HHGGQILFGPEDGH--LYFMVGDGE 391 (697)
Q Consensus 369 H~GG~L~FGP~DG~--LYis~GDgg 391 (697)
-..|.|+.-+ ||+ ||-++||..
T Consensus 264 vFsgGlv~r~-DG~~~LYaGi~Dae 287 (315)
T 2b4w_A 264 VFASGIVMRS-DGKVDLYSGVGDSH 287 (315)
T ss_dssp EEEEEEEECT-TSCEEEEEEETTTE
T ss_pred ecccceEECC-CCCEEEEeecchhh
Confidence 3457788888 985 999999953
No 269
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=20.67 E-value=1.9e+02 Score=29.87 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=36.2
Q ss_pred eeEEECCCCCceEEEEecCceEEEEecCCCCCCCcccccCCCCccCcccceeeccCCceeeeEeCCCCCcCCeEEEEEe
Q 005419 213 LNMVPHPDGSNRVFLSNQDGKTWLATVPEPGSGSKLELDESNPFLDLTDQVHADVELGMMGIAFHPNFQQNGRFFVSFN 291 (697)
Q Consensus 213 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~e~GLLGiAfhPdF~~NG~~YvsYs 291 (697)
..++++|++.+.+..+..+|.|+++++.. +.. ...++. ...-......++|+| +|...++-+
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~-~~~-------~~~~~~-----~~~h~~~v~~~~~sp----dg~~l~s~~ 315 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQ-VRG-------KASFLY-----SLPHRHPVNAACFSP----DGARLLTTD 315 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTT-CCS-------SSCCSB-----CCBCSSCEEECCBCT----TSSEEEEEE
T ss_pred EeeeecCCCceEEEEecCcceeeEEeccc-ccc-------cceEEE-----eeeccccccceeECC----CCCeeEEEc
Confidence 57899999864444556789998887532 211 111111 112245678899998 455544433
Done!