BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 005425
         (697 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score = 1044 bits (2700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/700 (74%), Positives = 579/700 (82%), Gaps = 26/700 (3%)

Query: 1   MSSSERMSSPPP---PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR 57
           M SS+ +   PP    KQYGVTKPIS+AGPTE D+QR+ ELEKFLV+AGLYESKEE  KR
Sbjct: 1   MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKR 60

Query: 58  EQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGP 117
            +VL R+ QI KDWVK+LTRLRGY+DQMVEDANA++FTFGSYRLGVHGPG DID LC+GP
Sbjct: 61  AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP 120

Query: 118 SYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE 177
           SYVSREEDFFFILHNILA+MEEVTELQPV DAHVPVMKFKFDG+SIDLLYASIS LVV E
Sbjct: 121 SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE 180

Query: 178 DLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 237
           DLDISD+SVL ++DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV
Sbjct: 181 DLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 240

Query: 238 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVW 297
           TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVW
Sbjct: 241 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVW 300

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
           DPRKN RD+THHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICE +EL+ AQW A
Sbjct: 301 DPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGA 360

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
           LFEPYLFFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMIERDT+GKLQCHPYPH
Sbjct: 361 LFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPH 420

Query: 418 EYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 477
           EYVDTSK C+HCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VS
Sbjct: 421 EYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVS 480

Query: 478 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKR 537
           H+RRKQIP YVFPEGYKR+R  R  +QQ+  E                          KR
Sbjct: 481 HVRRKQIPSYVFPEGYKRSRPQRPVNQQQGDE-----------------------ASAKR 517

Query: 538 QSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTS 597
            +ISPQ+QDS+SP+ ++   +++    N+EP   DK +     AE G VSNSSV+TS+TS
Sbjct: 518 LTISPQRQDSVSPEIISHRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITS 577

Query: 598 EVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDR 657
           EV S  DVG ESV GSS+GN GSVEGSN    SQ D C+ADS+ LLEN  ++    FQD 
Sbjct: 578 EVSSSGDVGFESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDG 637

Query: 658 VHEELELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA 697
           +HEELE NA LG VL+S  G+DSE V +  + RLSLTSTA
Sbjct: 638 LHEELEPNAALGIVLKSRGGVDSEPVPKSVLSRLSLTSTA 677


>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score = 1025 bits (2651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/749 (69%), Positives = 580/749 (77%), Gaps = 60/749 (8%)

Query: 1   MSSSERMSSPPPP---KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR 57
           M SS+ +   PP    KQYGVTKPIS+AGPTE D+QR+ ELEKFLV+AGLYESKEE  KR
Sbjct: 1   MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKR 60

Query: 58  EQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGP 117
            +VL R+ QI KDWVK+LTRLRGY+DQMVEDANA++FTFGSYRLGVHGPG DID LC+GP
Sbjct: 61  AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP 120

Query: 118 SYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE 177
           SYVSREEDFFFILHNILA+MEEVTELQPV DAHVPVMKFKFDG+SIDLLYASIS LVV E
Sbjct: 121 SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE 180

Query: 178 DLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 237
           DLDISD+SVL ++DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV
Sbjct: 181 DLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 240

Query: 238 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVW 297
           TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVW
Sbjct: 241 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVW 300

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
           DPRKN RD+THHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICE +EL+ AQW A
Sbjct: 301 DPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGA 360

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
           LFEPYLFFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMIERDT+GKLQCHPYPH
Sbjct: 361 LFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPH 420

Query: 418 EYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 477
           EYVDTSK C+HCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VS
Sbjct: 421 EYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVS 480

Query: 478 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD--QDGPE 535
           H+RRKQIP YVFPEGYKR+R  R  +QQ+  E      +   +KRKKDPE VD  QD   
Sbjct: 481 HVRRKQIPSYVFPEGYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAA 540

Query: 536 KRQSISPQKQDSLSPDHLA-------PSSVRSGTGSNVEPVIPDKR-------------- 574
           KR +ISPQ+QDS+SP+ ++            SG+    E V  D++              
Sbjct: 541 KRLTISPQRQDSVSPEIISHRFSSSSQECSASGSAKAKEIVEGDRKCQVGMGKLEDLVST 600

Query: 575 -VLNQEIAEGG----------------DVSNSSVITSVTSEVG----------------S 601
            V N E+   G                D S+  +  +  +E G                S
Sbjct: 601 NVENIEMGAIGRGMRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSS 660

Query: 602 CEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEE 661
             DVG ESV GSS+GN GSVEGSN    SQ D C+ADS+ LLEN  ++    FQD +HEE
Sbjct: 661 SGDVGFESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEE 720

Query: 662 LELNAGLGSVLQSTSGIDSETVVQKPVMR 690
           LE NA LG VL+S  G+DSE  V K V+R
Sbjct: 721 LEPNAALGIVLKSRGGVDSEP-VPKSVLR 748


>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 758

 Score =  999 bits (2584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/758 (67%), Positives = 578/758 (76%), Gaps = 76/758 (10%)

Query: 1   MSSSERM-SSPPP-----PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEED 54
           M S+E + +SP P     PK YGVTKPISMAGP + D+QRN+ELEKFLV+AGLYESKEE 
Sbjct: 5   MGSAEVLGNSPLPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEES 64

Query: 55  EKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALC 114
            KRE+VL RI QI KDWVK+LTR++GY+DQMVEDANA IFTFGSYRLGVHGPGADID LC
Sbjct: 65  AKREEVLSRIGQIVKDWVKQLTRIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLC 124

Query: 115 VGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV 174
           VGPSYV+REEDFF++LHNIL EMEEV+ELQPV DAHVPVMKFKFDG+SIDLLYASIS LV
Sbjct: 125 VGPSYVNREEDFFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLV 184

Query: 175 VREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVY 234
           V EDLDISD+SVL +VDEPTVRSLNGCRVADQILKLVPNVE F T LRCLKFWAKRRGVY
Sbjct: 185 VPEDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVY 244

Query: 235 SNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGF 294
           SNVTGFLGGVNWALLVARVCQLYPNAVPSML+SRFFRVYT+WRWPNPVMLCAI+E +LG 
Sbjct: 245 SNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGC 304

Query: 295 SVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ 354
           SVWDPRKN RD+THHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN +CEE+ELNKAQ
Sbjct: 305 SVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQ 364

Query: 355 WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
           WS+LFEPYLFFESY+NYLQVDIVAA+ADDL +WKGWVESR R LTL+IER T GKLQCHP
Sbjct: 365 WSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHP 424

Query: 415 YPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEI 474
           YPHEYVDTSKPCAHCAFFMGLQRK GE++QEGQQFDIR SV+EFK   + YMFWKPGMEI
Sbjct: 425 YPHEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEI 484

Query: 475 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS-----ENGNEYQTGSGLKRKKDPESV 529
            VSH+RR+QIPP+VFPEG+KR R  RL++ QRS      +NG        LKRK DP  +
Sbjct: 485 FVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRKNDPARI 544

Query: 530 --DQDGPEKRQSISPQKQDSLSP------------------------------------- 550
             + + P+KRQSISP++QDS+S                                      
Sbjct: 545 EGEHNSPQKRQSISPRRQDSVSSNISNFSNTASSERPEADIEAKTIVEKNSPCRTITREN 604

Query: 551 DHLAPSSVRSGT--------------GSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVT 596
           + LA    R G               GS VE + PDK    +   +    SNSSVITS+T
Sbjct: 605 EELAFGGSRIGNCSSRKDSSSVESDKGSTVEIIDPDKVPFTE--IDHRCASNSSVITSLT 662

Query: 597 SEVGSCEDVGNESVAGSSEGNNGSVEG----SNNPVSSQSDCCDADSQSLLENRHLDGNG 652
           SE  SCE+VG    AGSSEGN GS+EG    SNNP +S  D C+ADS+  L+NR ++G  
Sbjct: 663 SESSSCENVGFALAAGSSEGNAGSIEGSADESNNPGTSVVDSCEADSELQLDNRCVNG-- 720

Query: 653 AFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 690
              D +H E E NA L   L    G+ S T +Q PV+R
Sbjct: 721 ---DSMHMETEPNAVLEMALNPGGGVKS-TTIQNPVIR 754


>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
 gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
          Length = 712

 Score =  996 bits (2575), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/705 (71%), Positives = 559/705 (79%), Gaps = 54/705 (7%)

Query: 1   MSSSERMS-SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQ 59
           M  SE +S SPPP KQYGVTKPIS AGPTEAD+QR RELEK L ++GLYESK+E  KRE+
Sbjct: 1   MVISEGLSASPPPAKQYGVTKPISTAGPTEADIQRTRELEKLLGDSGLYESKDEAVKREE 60

Query: 60  VLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSY 119
           VL RI Q                                    VHGPGADID LCVGPSY
Sbjct: 61  VLARIDQ------------------------------------VHGPGADIDTLCVGPSY 84

Query: 120 VSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL 179
           V+REEDFFF+LHNILAEMEEVTELQPV DAHVPVM+FKFDG+SIDLLYASIS LVV EDL
Sbjct: 85  VNREEDFFFVLHNILAEMEEVTELQPVPDAHVPVMRFKFDGISIDLLYASISLLVVPEDL 144

Query: 180 DISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTG 239
           DISD+SVL DVDEPTVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTG
Sbjct: 145 DISDVSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTG 204

Query: 240 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDP 299
           FLGGVNWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E ELGFS+WDP
Sbjct: 205 FLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDP 264

Query: 300 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 359
           RKN RD+THHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQYGN ICEE+EL K QW+ LF
Sbjct: 265 RKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLF 324

Query: 360 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           EPYLFFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMI+RDTYGKLQCHPYPHEY
Sbjct: 325 EPYLFFESYKNYLQVDIVATDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEY 384

Query: 420 VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHI 479
           VDTSKPCAHCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VSH+
Sbjct: 385 VDTSKPCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHV 444

Query: 480 RRKQIPPYVFPEGYKRTRHPRLASQQRSSE----NGNEYQTGS---GLKRKKDPESVD-- 530
           RRKQIP YVFP+GY+R RHPR+ +QQ+S +    + + Y  GS   G KRKKD + +D  
Sbjct: 445 RRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVK 504

Query: 531 QDGPEKRQSISPQKQDSLSPDHL-----APSSVRSGTGSNVEPVIPDKRVLNQEIAEGGD 585
            D PEKR SISPQ++DS+SPD        PSS  S        +  DKR    +  +G  
Sbjct: 505 NDMPEKRNSISPQRRDSVSPDIFTHKFGGPSSECSAIAEGKGTLQLDKRTFCPDDVDGVC 564

Query: 586 VSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLEN 645
            SNSS ITS++SE+ SCED+G ESVAGSSEGNNGS EGSNN VSSQSD  DA+S+SLLEN
Sbjct: 565 TSNSSGITSLSSEIVSCEDIGTESVAGSSEGNNGSAEGSNNLVSSQSDSGDAESESLLEN 624

Query: 646 RHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 690
            + DG G  QD + EELE NA +  +   T G+ +E  +QKPV+R
Sbjct: 625 AYADG-GVLQDGLQEELEPNAAV-EMAPDTLGVSAEA-LQKPVIR 666


>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
          Length = 778

 Score =  988 bits (2555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/737 (68%), Positives = 565/737 (76%), Gaps = 68/737 (9%)

Query: 1   MSSSERMSSPPP---PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR 57
           M SS+ +   PP    KQYGVTKPIS+AGPTE D+QR+ ELEK         SKEE  KR
Sbjct: 1   MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEK---------SKEEAIKR 51

Query: 58  EQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGP 117
            +VL R+ QI KDWVK+LTRLRGY+DQMVEDANA++FTFGSYRLGVHGPG DID LC+GP
Sbjct: 52  AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP 111

Query: 118 SYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE 177
           SYVSREEDFFFILHNILA+MEEVTELQPV DAHVPVMKFKFDG+SIDLLYASIS LVV E
Sbjct: 112 SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE 171

Query: 178 DLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 237
           DLDISD+SVL ++DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV
Sbjct: 172 DLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 231

Query: 238 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVW 297
           TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYT WRWPNPVMLCAI+E ELGFSVW
Sbjct: 232 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVW 291

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
           DPRKN RD+THHMPIITPAYPCMNSSYNVS STLRVMM+QFQYGN ICE +EL+ AQW A
Sbjct: 292 DPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGA 351

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
           LFEPYLFFESY+NYLQVDIVA + DDL AWKGWVESRLRQLTLMIERDT+GKLQCHPYPH
Sbjct: 352 LFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPH 411

Query: 418 EYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 477
           EYVDTSK C+HCAFFMGLQRK GE++QEGQQFDIRG+V+EF+ SINMYMFWKPGMEI VS
Sbjct: 412 EYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVS 471

Query: 478 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD--QDGPE 535
           H+RRKQIP YVFPEGYKR+R  R  +QQ+  E      +   +KRKKDPE VD  QD   
Sbjct: 472 HVRRKQIPSYVFPEGYKRSRPQRPVNQQQGDEACRTGSSEKHMKRKKDPEEVDVEQDKAA 531

Query: 536 KRQSISPQKQDSLSPDHLA------------------------PSSVRSGTG-------S 564
           KR +ISPQ+QDS+SP+ ++                            + G G       +
Sbjct: 532 KRLTISPQRQDSVSPEIISHRFSSSSQECSASGSAKAKEIVEGDRKCQVGMGKLEDLVST 591

Query: 565 NVE-----------------------PVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGS 601
           NVE                       P   DK +     AE G VSNSSV+TS+TSEV S
Sbjct: 592 NVENIEMGAIGRGMRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSS 651

Query: 602 CEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEE 661
             DVG ESV GSS+GN GSVEGSN    SQ D C+ADS+ LLEN  ++    FQD +HEE
Sbjct: 652 SGDVGFESVGGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEE 711

Query: 662 LELNAGLGSVLQSTSGI 678
           LE    +  +    +G+
Sbjct: 712 LEAATRVVVIFAFNAGV 728


>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
           sativus]
          Length = 772

 Score =  978 bits (2527), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/772 (65%), Positives = 574/772 (74%), Gaps = 90/772 (11%)

Query: 1   MSSSERM-SSPPP-----PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEED 54
           M S+E + +SP P     PK YGVTKPISMAGP + D+QRN+ELEKFLV+AGLYESKEE 
Sbjct: 5   MGSAEVLGNSPLPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEES 64

Query: 55  EKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALC 114
            KRE+VL RI QI KDWVK+LTR++GY+DQMVEDANA+IFTFGSYRLGVHGPGADID LC
Sbjct: 65  AKREEVLSRIGQIVKDWVKQLTRIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLC 124

Query: 115 VGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV 174
           VGPSYV+REEDFF++LHNIL EMEEV+ELQPV DAHVPVMKFKFDG+SIDLLYASIS LV
Sbjct: 125 VGPSYVNREEDFFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLV 184

Query: 175 VREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCT--------------T 220
           V EDLDISD+SVL +VDEPTVRSLNGCRVADQILKLVP                      
Sbjct: 185 VPEDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFA 244

Query: 221 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN 280
           LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSML+SRFFRVYT+WRWPN
Sbjct: 245 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPN 304

Query: 281 PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
           PVMLCAI+E +LG SVWDPRKN RD+THHMPIITPAYPCMNSSYNVSTSTLRVMM+QFQ+
Sbjct: 305 PVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQF 364

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 400
           GN +CEE+ELNKAQWS+LFEPYLFFESY+NYLQVDIVAA+ADDL +WKGWVESR R LTL
Sbjct: 365 GNKVCEEIELNKAQWSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTL 424

Query: 401 MIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKL 460
           +IER T GKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK GE++QEGQQFDIR SV+EFK 
Sbjct: 425 LIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKH 484

Query: 461 SINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS-----ENGNEYQ 515
             + YMFWKPGMEI VSH+RR+QIPP+VFPEG+KR R  RL++ QRS      +NG    
Sbjct: 485 YTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGS 544

Query: 516 TGSGLKRKKDPESV--DQDGPEKRQSISPQKQDSLSPD---------------------- 551
               LKRK DP  +  + + P+KRQSISP++QDS+S +                      
Sbjct: 545 CERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSNISNFSNTASSERPEADIEAKTI 604

Query: 552 ---------------HLAPSSVRSGT--------------GSNVEPVIPDKRVLNQEIAE 582
                           LA    R G               GS VE + PDK    +   +
Sbjct: 605 VEKNSPCRTITRENEELAFGGSRIGNCSSRKDSSSVESDKGSTVEIIDPDKVPFTE--ID 662

Query: 583 GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG----SNNPVSSQSDCCDAD 638
               SNSSVITS+TSE  SCE+VG    AGSSEGN GS+EG    SNNP +S  D C+AD
Sbjct: 663 HRCASNSSVITSLTSESSSCENVGFALAAGSSEGNAGSIEGSADESNNPGTSVVDSCEAD 722

Query: 639 SQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 690
           S+  L+NR ++G     D +H E E NA L   L    G+ S T +Q PV+R
Sbjct: 723 SELQLDNRCVNG-----DSMHMETEPNAVLEMALNPGGGVKS-TTIQNPVIR 768


>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 766

 Score =  908 bits (2346), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/694 (67%), Positives = 542/694 (78%), Gaps = 32/694 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+GVTKPISMAGP+  D+QR RELEKFL  +GLYESK+E  KRE+VL R+ +I K WVK
Sbjct: 12  KQFGVTKPISMAGPSATDLQRTRELEKFLAASGLYESKDEAAKREEVLHRLGEIVKSWVK 71

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTRLRGY+ QMVEDANA+I TFGSYRLGVHGPGAD+D LC+GPSYV+REEDFF+ LH+I
Sbjct: 72  QLTRLRGYTGQMVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTREEDFFYTLHDI 131

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LA +EEVTELQP+ DAHVPVMKFKFDG+SIDLLYASISRLV+ EDLDISD+SVL++VDEP
Sbjct: 132 LANVEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDISDVSVLHNVDEP 191

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPN+EHF TTLRCLKFWAKRRG+YSNVTGFLGGVN ALLVARV
Sbjct: 192 TVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARV 251

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQ YPNAVPSMLVSRFFRVYT WRWP PVMLC I+E ELGF VW P KN RD++HHMPII
Sbjct: 252 CQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPII 311

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVSTSTLRVMMDQFQYGN IC E+EL++A W ALFE Y FFESY+NYLQ
Sbjct: 312 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYSFFESYKNYLQ 371

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           VD+VAA+ADDL +WKGWVESRLRQLTLMIERDT+GKLQCHPY HE+VDTS+ CAHCAFFM
Sbjct: 372 VDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCAFFM 431

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK GEVVQEGQQFDIRG+VEEF+ S+NMYMFWKPGMEI VSH+RR+QIP YV P+GY
Sbjct: 432 GLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPFYVVPDGY 491

Query: 494 KRTRHPRLASQQRSSENGNEYQTGS----GLKRKKDPESVDQDGPE--KRQSISPQKQDS 547
           KR+R  R  SQ  + ++ +   +G+     ++++K+ + VD  G    KRQS SP     
Sbjct: 492 KRSRLSRPTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVKRQSASP----- 546

Query: 548 LSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQE---IAEGGD-----------VSNSSVIT 593
            S D LA  S     G +VE V   + + N E   ++  G             SNSSVIT
Sbjct: 547 -SEDRLARHSSLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDRTESPEAASNSSVIT 605

Query: 594 SVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGA 653
           S    VGS ED G+ +VAG  E + G VE  NN     S   + DS +L++N    GN  
Sbjct: 606 S----VGSSEDTGSVTVAGCVEESTGGVEMMNNGWFEDSTYGN-DSVTLVKNIVASGNEV 660

Query: 654 FQDRVHEELELNAGLGSVLQSTSGIDSETVVQKP 687
           FQ  + E+ + NA LG VL S   + SE VVQ+P
Sbjct: 661 FQHELQEQFQPNATLGMVLDSAEKVISE-VVQEP 693


>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 790

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/700 (66%), Positives = 543/700 (77%), Gaps = 26/700 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+GVTKPISMAGPT  D+QR RELEKFL  +GLYESKEE  KRE+VL R+ +I K+WVK
Sbjct: 12  KQFGVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLHRLGEIVKNWVK 71

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTRLRGY+DQMVEDANA+I TFGSYRLGVHGPGAD+D LC+GPSYV+REEDFF+ LH+I
Sbjct: 72  QLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDI 131

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LA +EEVTELQP+ DAHVPVMKFKFDG+SIDLLYASISRL+V EDLDISD+SVL++VDEP
Sbjct: 132 LANIEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNVDEP 191

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRG+YSNVTGFLGGVN ALLVARV
Sbjct: 192 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARV 251

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQ YP AVPSMLVSRFFRVYT WRWP PVMLC I+E +LGF VW P KN RD++HHMPII
Sbjct: 252 CQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPII 311

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLRVMM+QFQYGN IC E+EL+K  W ALFE Y FFESY+NYLQ
Sbjct: 312 TPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYSFFESYKNYLQ 371

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           VD+VAA+ADDL +WKGWVESRLRQLTLMIERDT+GKLQCHPY HE+VDTS+ CAHCAFFM
Sbjct: 372 VDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFM 431

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GL RK GEVVQEGQQFDIRG+VEEF+ S+NMYMFWKPGMEI VSH+RR+QIP YVFP+GY
Sbjct: 432 GLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPDGY 491

Query: 494 KRTRHPRLASQQRS--SENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSP- 550
           KR+R  R  SQ  +  S + NE      ++R +  +  + DG + R+    ++Q +  P 
Sbjct: 492 KRSRPSRPTSQFENCKSFHNNEVSVTEHVERIRKRK--NNDGVDVREDAIVKRQYACPPG 549

Query: 551 DHLAPSSVRSGTGSNVEPVIPDKRVLNQE---IAEGGD-----------VSNSSVITSVT 596
           D LA  +     G +VE V   + + + E   ++  G             SNSSVITS  
Sbjct: 550 DRLARRNSLGTGGLSVEAVSDSQELRSVECNHLSNSGQDDLDRTESPEAASNSSVITS-- 607

Query: 597 SEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQD 656
             VGS ED+ + SVAG  E + G VE  NN    +      DS +L++N    GN  FQ 
Sbjct: 608 --VGSSEDIVSVSVAGCVENSRG-VEMMNNG-RFEDTTYGNDSVTLVKNIVASGNEVFQH 663

Query: 657 RVHEELELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTST 696
            + ++L+ NA LG VL S   + SE  VQ+PV+R  + ST
Sbjct: 664 ELQQQLQPNAMLGMVLDSAEKVLSEA-VQEPVIRHEIEST 702


>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 732

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/558 (74%), Positives = 477/558 (85%), Gaps = 14/558 (2%)

Query: 8   SSPPPPKQ-----YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           S+PP  +Q     YG TKP+S+AGPT+AD+QRN +L+KFL+++GLYES EE   R++VL 
Sbjct: 11  STPPHQEQQANSKYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKEVLH 70

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           R+ QI K WVK+LTR RGY+DQMVEDANA+IFTFGSYRLGVHGPG DID LC+GPSYV+R
Sbjct: 71  RLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNR 130

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
           EEDFF ILHNILAEMEEV+ELQPV DAHVPVMKFKF G+SIDLLYASIS LVV EDLDIS
Sbjct: 131 EEDFFIILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDIS 190

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
             SVL DVDEPTVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLG
Sbjct: 191 HGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLG 250

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           GVNWA+LVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF +WDPR+N
Sbjct: 251 GVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRN 310

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
            RD+ H MPIITPAYPCMNSSYNVS STLRVM+DQF YGN IC+E+ELNKAQWSALF+PY
Sbjct: 311 PRDRFHTMPIITPAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKAQWSALFQPY 370

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           +FFE+Y+NYLQVDI+A++ DDLLAW+GWVESRLR LTL IERDT G LQCHPYPHEYVDT
Sbjct: 371 IFFEAYKNYLQVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDT 430

Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 482
           SKPCAH AFFMGLQRK G   QEGQQFDIRG+V+EF+  INMYM+WKPGM+I VSH+RRK
Sbjct: 431 SKPCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRK 490

Query: 483 QIPPYVFPEGYKRTRHPRLASQQR--SSENGNEYQTGSGL-----KRKKDPESVDQ--DG 533
           Q+P +VFP+GYKRTR PR  S Q   + ++     +G GL     KRK   E VD+  D 
Sbjct: 491 QLPAFVFPDGYKRTRMPRHISHQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDK 550

Query: 534 PEKRQSISPQKQDSLSPD 551
           P+KR SISPQ+ + +SP+
Sbjct: 551 PDKRASISPQRLECVSPE 568


>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
 gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
          Length = 754

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/729 (64%), Positives = 543/729 (74%), Gaps = 54/729 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YG+TKPIS+AGP+EAD+ RN +L KFLV++GLYESKEE+ KRE+VL RI QI KDW+K
Sbjct: 25  KRYGITKPISLAGPSEADLLRNADLVKFLVDSGLYESKEENLKREEVLCRIDQIVKDWIK 84

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTR RGYSDQMV++ANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH+I
Sbjct: 85  QLTRQRGYSDQMVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHDI 144

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LAEM+E+TELQPV DAHVPVMKFKF G+SIDLLYASIS  VV EDLDIS  SVL DVDE 
Sbjct: 145 LAEMDEITELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDEQ 204

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR+
Sbjct: 205 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARL 264

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWDPR+N RD+ HHMPII
Sbjct: 265 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPII 324

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLRVMM+QFQYGN ICEE+ELNKAQWSALFEPYLFFE+Y+NYLQ
Sbjct: 325 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQ 384

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI+AA+ADDLLAWKGWVESRLRQLTL IERDT G LQCHPYP+EY+DTSK C HCAFFM
Sbjct: 385 IDIIAADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAFFM 444

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQR+ G   QEGQQFDIRG+VEEF+  INMYMFWKPGM++ VSH RR+Q+P +VFP+GY
Sbjct: 445 GLQRRKGVSGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPDGY 504

Query: 494 KRTRHPRLASQQ--RSSENGNEYQTGS---GLKRKKDPESVD--QDGPEKRQSISPQKQD 546
           KR+R  R  +QQ  + S+     + GS    LKRK D E VD   D PEKR S+SPQ+  
Sbjct: 505 KRSRTSRHPNQQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEKRASVSPQRLQ 564

Query: 547 SLSPDHLAPSSVRSGTGSNVEPVIPDKRV-----------LNQEIAEGGDVSNSSV---- 591
           S+SP+    SS R+   S  E V  +              L++  ++ G V+   V    
Sbjct: 565 SVSPESNTISSGRTSLVSFCEGVPLESSTVADVDSNSEGKLDRGHSDNGKVTFRGVVQVT 624

Query: 592 --------ITSVTS-------------EVGSCEDVGNE---------SVAGSSEGNNGSV 621
                   I++ TS             E   C+ +  +         + + S  G     
Sbjct: 625 ETINHDPRISAQTSMDLDDIPIYLSKVEEAECKIMNPDPKQELLDPYATSNSINGEAPKT 684

Query: 622 EGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSE 681
            G +  +    D   ADS SLLE   LD +   Q  + E LE N  +  V+ S  G  SE
Sbjct: 685 MGEDR-IGDLGDILAADSDSLLETDCLDVSRLSQSGLLENLEPNTEMVKVVNSQDGARSE 743

Query: 682 TVVQKPVMR 690
           + +QKPV+R
Sbjct: 744 S-LQKPVIR 751


>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
          Length = 740

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/739 (61%), Positives = 528/739 (71%), Gaps = 67/739 (9%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQYG+TKPIS+A P E D+Q+  ELEKFLVEAGLYES EE  +RE+VLG + +I KDW
Sbjct: 16  PQKQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH
Sbjct: 76  VKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           +ILA+ EEVTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVD
Sbjct: 136 DILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVA
Sbjct: 196 EVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           RVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK  RD++HHMP
Sbjct: 256 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NY
Sbjct: 316 IITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNY 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           LQVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAF
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           FMGL RK G  +QEGQQFDIRG+V+EF+  I MY +W+PGME+ VSH+RRKQIP YVFPE
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495

Query: 492 GYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSIS 541
           GYKR R      HP+  S +   E+G   ++  G  KRK D   V    P    KR SIS
Sbjct: 496 GYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASIS 554

Query: 542 PQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------- 582
           P    S+SP H   SS  SG        S   PV      +     LN  +A        
Sbjct: 555 P----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSV 610

Query: 583 ------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNN 618
                                   G ++ N +  T   S     E V +E V   S G N
Sbjct: 611 TSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGN 670

Query: 619 GSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGI 678
            S E     +    D   A    L+EN H  GNG  Q  + EELE N G+  V ++ +G+
Sbjct: 671 KSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEPNNGIEVVSKAHAGV 722

Query: 679 DSETVVQKPVMRLSLTSTA 697
           +S+   QK  +R+SLTSTA
Sbjct: 723 NSDA-PQKASLRVSLTSTA 740


>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 651

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/573 (72%), Positives = 477/573 (83%), Gaps = 16/573 (2%)

Query: 1   MSSSERMSSPPP-----PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDE 55
           +S S    S PP     P +Y  TKP+S+AGPT+AD+QRN EL+KFL+++GLYES EE  
Sbjct: 3   VSDSPSGGSTPPQQEQQPNKYAFTKPLSLAGPTDADLQRNNELDKFLLDSGLYESNEESA 62

Query: 56  KREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCV 115
            R++VL R+ QI K+WVK+LTR RGY+DQMVEDANA+IFTFGSYRLGVHGPG DID LC+
Sbjct: 63  ARKEVLHRLDQIVKNWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCI 122

Query: 116 GPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVV 175
           GPSYV+REEDFF ILHNILAEMEEV+ELQPV DAHVPVMKFKF G+SIDLLYASIS LVV
Sbjct: 123 GPSYVNREEDFFVILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVV 182

Query: 176 REDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYS 235
            EDLDIS  SVL DVDEPTVRSLNGCRVADQILKLVPNVEHF T LRCLKFWAKRRGVYS
Sbjct: 183 PEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYS 242

Query: 236 NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS 295
           NVTGFLGGVNWA+LVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF 
Sbjct: 243 NVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFP 302

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 355
           +WDPR+N RD+ H MPIITPAYPCMNSSYNVS STLRVMM+QF+YGN IC+E+ELNKAQW
Sbjct: 303 IWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKAQW 362

Query: 356 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           SALF+PY+FFE+Y+NYLQVDI+A++ADDLLAW+GWVESRLR LTL IERDT G LQCHPY
Sbjct: 363 SALFQPYIFFEAYKNYLQVDIIASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPY 422

Query: 416 PHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC 475
           P+EYVDTSK CAH AFFMGLQRK G   QEGQQFDIRG+V+EF+  INMYM+WKPGM+I 
Sbjct: 423 PNEYVDTSKLCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIF 482

Query: 476 VSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDP 526
           VSH+RRKQ+P +VFP GYKRTR PR  S Q      +  +  SG         +KRK  P
Sbjct: 483 VSHVRRKQLPAFVFPGGYKRTRMPRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCP 542

Query: 527 ESVDQD--GPEKRQSISPQKQDSLSPDHLAPSS 557
           E VD+    P+KR SISPQ+ + +SP+     S
Sbjct: 543 EMVDKKPGKPDKRASISPQRLECVSPESCTSKS 575


>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
          Length = 700

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/699 (62%), Positives = 504/699 (72%), Gaps = 58/699 (8%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           KP+S+AGP +AD+QR  EL KFLVEAGLYES  E  +RE+VLG + +I KDWVK+LT  R
Sbjct: 6   KPLSLAGPVDADIQRTAELNKFLVEAGLYESAHESARREEVLGELDKIVKDWVKQLTSQR 65

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           GY+DQMVEDANA++FTFGSYRLGVHGPGAD+D LCVGPSYV+REEDFF +LH+ILA+ EE
Sbjct: 66  GYTDQMVEDANAVLFTFGSYRLGVHGPGADVDTLCVGPSYVNREEDFFIVLHDILAQTEE 125

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           VTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL D+DE TVRSLN
Sbjct: 126 VTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDEATVRSLN 185

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRVADQIL+LVPN+E+F TTLRCLK WAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN
Sbjct: 186 GCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 245

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           AVPSMLVSRFFRV+T WRWPNPVMLCAI+E ELGF VWDPRKN RD+THHMPIITPAYPC
Sbjct: 246 AVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPC 305

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
           MNSSYNVSTSTLRVM++QFQ+GN IC+E+ELNKA W ALFE + FFE+Y+NYLQVDI+A 
Sbjct: 306 MNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQFFEAYKNYLQVDIIAE 365

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 439
           + +DL  WKGWVESRLRQLTL IERDTYGKLQCHPYP+EY D S+ CAHCAFFMGL R  
Sbjct: 366 DDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRNV 425

Query: 440 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHP 499
           G  ++EGQQFDIRG+V+EF+  INMYMFWKPGME+ VSH+RRK+IP YVFPEGY+R R  
Sbjct: 426 GVKIEEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPRPQ 485

Query: 500 RLASQQRSS-----ENGNEYQTGSG-LKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHL 553
           R  S Q+ S     ENGN   +  G LKRK D  S   D  E  +S+    + S+SP H 
Sbjct: 486 RHVSHQQQSDKNDTENGNMTGSPDGQLKRKHD--SAGTDDTEPCRSVKRASRASVSPVHP 543

Query: 554 APSSVRSGTGSN------------------------------------------VEPVIP 571
             SS  SG  S+                                           + +  
Sbjct: 544 TTSSPSSGNISDEATCNNQKKMSSNASGGSQNSHGSGNLEQANCSGSSPASEKSTDSIAS 603

Query: 572 DKRVLNQEIAEGGDVSNSSV-----ITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNN 626
           D + +  E    GDV+N+ V     + + T  V  C  +   +    SE       G NN
Sbjct: 604 DSKCVIGETVCSGDVTNNLVTCISPVNNSTPTVAVCTTLKRVAEKVVSELVGSESLGGNN 663

Query: 627 PVSSQSDCCDADSQS-LLENRHLDGNGAFQDRVHEELEL 664
           P     +  + D  S L+EN H  GNG  Q  +HEELE+
Sbjct: 664 P--ELLEIAEKDMGSVLVENVHFGGNGVTQSGLHEELEV 700


>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
 gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
          Length = 708

 Score =  857 bits (2213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/706 (62%), Positives = 506/706 (71%), Gaps = 66/706 (9%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQYG+TKPIS+A P E D+Q+  ELEKFLVEAGLYES EE  +RE+VLG + +I KDW
Sbjct: 16  PQKQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH
Sbjct: 76  VKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           +ILA+ EEVTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVD
Sbjct: 136 DILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVA
Sbjct: 196 EVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           RVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK  RD++HHMP
Sbjct: 256 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NY
Sbjct: 316 IITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNY 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           LQVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAF
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           FMGL RK G  +QEGQQFDIRG+V+EF+  I MY +W+PGME+ VSH+RRKQIP YVFPE
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495

Query: 492 GYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSIS 541
           GYKR R      HP+  S +   E+G   ++  G  KRK D   V    P    KR SIS
Sbjct: 496 GYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASIS 554

Query: 542 PQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------- 582
           P    S+SP H   SS  SG        S   PV      +     LN  +A        
Sbjct: 555 P----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSV 610

Query: 583 ------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNN 618
                                   G ++ N +  T   S     E V +E V   S G N
Sbjct: 611 TSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGN 670

Query: 619 GSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 664
            S E     +    D   A    L+EN H  GNG  Q  + EELE+
Sbjct: 671 KSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEV 708


>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
           Group]
          Length = 708

 Score =  855 bits (2209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/706 (62%), Positives = 506/706 (71%), Gaps = 66/706 (9%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQ+G+TKPIS+A P E D+Q+  ELEKFLVEAGLYES EE  +RE+VLG + +I KDW
Sbjct: 16  PQKQFGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH
Sbjct: 76  VKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           +ILA+ EEVTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVD
Sbjct: 136 DILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVA
Sbjct: 196 EVTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           RVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK  RD++HHMP
Sbjct: 256 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+NY
Sbjct: 316 IITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNY 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           LQVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAF
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           FMGL RK G  +QEGQQFDIRG+V+EF+  I MY +W+PGME+ VSH+RRKQIP YVFPE
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495

Query: 492 GYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSIS 541
           GYKR R      HP+  S +   E+G   ++  G  KRK D   V    P    KR SIS
Sbjct: 496 GYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASIS 554

Query: 542 PQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------- 582
           P    S+SP H   SS  SG        S   PV      +     LN  +A        
Sbjct: 555 P----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDSV 610

Query: 583 ------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNN 618
                                   G ++ N +  T   S     E V +E V   S G N
Sbjct: 611 TSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGN 670

Query: 619 GSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 664
            S E     +    D   A    L+EN H  GNG  Q  + EELE+
Sbjct: 671 KSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEV 708


>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
 gi|223947741|gb|ACN27954.1| unknown [Zea mays]
 gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
          Length = 694

 Score =  855 bits (2209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/688 (62%), Positives = 499/688 (72%), Gaps = 31/688 (4%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PKQYG+TKP+S+ GP EAD+QR  ELEKFL+E+GLYES +E  +RE+VLG++ QI KDWV
Sbjct: 8   PKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWV 67

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH 
Sbjct: 68  KQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHG 127

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           ILA+ E+VTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVDE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGVNWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           VCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK  W ALFEP+ FFE+Y+NYL
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYL 367

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           QVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFF
Sbjct: 368 QVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFF 427

Query: 433 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
           MGL RK G  +QEGQQFDIRG+V+EF+  INMYMFWKPGME+ VSH+RRKQ+P YVFPEG
Sbjct: 428 MGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEG 487

Query: 493 YKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----Q 543
           YKR   +RH    S +  +E+G   ++  S LKRK D    D     KR S SP      
Sbjct: 488 YKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNS 547

Query: 544 KQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVIT 593
            Q   + D          APS    G+ ++ +     PD  +        G V +   I+
Sbjct: 548 PQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAIS 607

Query: 594 S----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLL 643
                       T  V  C  +   +    SE       GSNN           D   L 
Sbjct: 608 KHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLA 665

Query: 644 ENRHLDGNGAFQDRVHEELELNAGLGSV 671
           EN    GNG  Q  + EELE N  + +V
Sbjct: 666 ENVRFGGNGVAQGGLPEELEPNNRIEAV 693


>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
 gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
          Length = 702

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/681 (62%), Positives = 496/681 (72%), Gaps = 31/681 (4%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PKQYG+TKP+S+ GP EAD+QR  ELEKFL+E+GLYES +E  +RE+VLG++ QI KDWV
Sbjct: 8   PKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWV 67

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH 
Sbjct: 68  KQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHG 127

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           ILA+ E+VTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVDE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGVNWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           VCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK  W ALFEP+ FFE+Y+NYL
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYL 367

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           QVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFF
Sbjct: 368 QVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFF 427

Query: 433 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
           MGL RK G  +QEGQQFDIRG+V+EF+  INMYMFWKPGME+ VSH+RRKQ+P YVFPEG
Sbjct: 428 MGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEG 487

Query: 493 YKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----Q 543
           YKR   +RH    S +  +E+G   ++  S LKRK D    D     KR S SP      
Sbjct: 488 YKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNS 547

Query: 544 KQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVIT 593
            Q   + D          APS    G+ ++ +     PD  +        G V +   I+
Sbjct: 548 PQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAIS 607

Query: 594 S----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLL 643
                       T  V  C  +   +    SE       GSNN           D   L 
Sbjct: 608 KHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLA 665

Query: 644 ENRHLDGNGAFQDRVHEELEL 664
           EN    GNG  Q  + EELE+
Sbjct: 666 ENVRFGGNGVAQGGLPEELEV 686


>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
 gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
          Length = 686

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/681 (62%), Positives = 496/681 (72%), Gaps = 31/681 (4%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PKQYG+TKP+S+ GP EAD+QR  ELEKFL+E+GLYES +E  +RE+VLG++ QI KDWV
Sbjct: 8   PKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWV 67

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH 
Sbjct: 68  KQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHG 127

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           ILA+ E+VTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVDE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGVNWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           VCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK  W ALFEP+ FFE+Y+NYL
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYL 367

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           QVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFF
Sbjct: 368 QVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFF 427

Query: 433 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
           MGL RK G  +QEGQQFDIRG+V+EF+  INMYMFWKPGME+ VSH+RRKQ+P YVFPEG
Sbjct: 428 MGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEG 487

Query: 493 YKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----Q 543
           YKR   +RH    S +  +E+G   ++  S LKRK D    D     KR S SP      
Sbjct: 488 YKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNS 547

Query: 544 KQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVIT 593
            Q   + D          APS    G+ ++ +     PD  +        G V +   I+
Sbjct: 548 PQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAIS 607

Query: 594 S----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLL 643
                       T  V  C  +   +    SE       GSNN           D   L 
Sbjct: 608 KHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLA 665

Query: 644 ENRHLDGNGAFQDRVHEELEL 664
           EN    GNG  Q  + EELE+
Sbjct: 666 ENVRFGGNGVAQGGLPEELEV 686


>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
          Length = 696

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/681 (62%), Positives = 496/681 (72%), Gaps = 31/681 (4%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PKQYG+TKP+S+ GP EAD+QR  ELEKFL+E+GLYES +E  +RE+VLG++ QI KDWV
Sbjct: 8   PKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIVKDWV 67

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH 
Sbjct: 68  KQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHG 127

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           ILA+ E+VTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVDE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            TVRSLNGCRVADQI++LVPN E+F T LRCLK+WAKRRGVYSNVTGFLGGVNWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           VCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NK  W ALFEP+ FFE+Y+NYL
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYL 367

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           QVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFF
Sbjct: 368 QVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFF 427

Query: 433 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
           MGL RK G  +QEGQQFDIRG+V+EF+  INMYMFWKPGME+ VSH+RRKQ+P YVFPEG
Sbjct: 428 MGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEG 487

Query: 493 YKR---TRHPRLASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----Q 543
           YKR   +RH    S +  +E+G   ++  S LKRK D    D     KR S SP      
Sbjct: 488 YKRPRPSRHVNHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNS 547

Query: 544 KQDSLSPDHL--------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVIT 593
            Q   + D          APS    G+ ++ +     PD  +        G V +   I+
Sbjct: 548 PQSGSTGDETRCNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAIS 607

Query: 594 S----------VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLL 643
                       T  V  C  +   +    SE       GSNN           D   L 
Sbjct: 608 KHSSVPLVENCTTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLA 665

Query: 644 ENRHLDGNGAFQDRVHEELEL 664
           EN    GNG  Q  + EELE+
Sbjct: 666 ENVRFGGNGVAQGGLPEELEI 686


>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
 gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/557 (73%), Positives = 466/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 10  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 69

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 70  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 129

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 130 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 189

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL DVDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 190 VLCDVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 249

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWDPRKN RD
Sbjct: 250 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRD 309

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 310 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 369

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVA +A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 370 EAYKNYLQVDIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 429

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 430 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 489

Query: 486 PYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSGL----KRKKDPESVDQ--DGPEKR 537
           P+VFP GY+R R  R  +Q   +S E+G    +GS +    KRK D E +D   + PEKR
Sbjct: 490 PFVFPNGYRRPRQSRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKR 549

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP+  A
Sbjct: 550 ASLSPQSLDIVSPESSA 566


>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 863

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/599 (69%), Positives = 478/599 (79%), Gaps = 7/599 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P   YGVTKPIS+AGP +AD+ RN ELEKFLV++ LYESKEE  KRE+VLGRI QI K W
Sbjct: 16  PVTNYGVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT LRGY++QMVEDANA+IFTFGSYRLGVHGPG+DID LCVGPSYV+RE DFF ILH
Sbjct: 76  VKQLTLLRGYTEQMVEDANAVIFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILH 134

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           NILAEMEEVT+LQPV DAHVPVM+FKF G+SIDLLYASIS LVV EDLDIS  SVL +VD
Sbjct: 135 NILAEMEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVD 194

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA
Sbjct: 195 EQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 254

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           +VCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF VWDPR+N RD+ H MP
Sbjct: 255 QVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMP 314

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCMNSSYNVSTSTLRVMM+QF+YGN+ICEE++L+KAQWSALFEPYLFFE+Y+NY
Sbjct: 315 IITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNY 374

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           LQVDI+AA+ADDLLAWKGWVESR RQLTL IERDT G LQCHPYP EY DTSKPC+HCAF
Sbjct: 375 LQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAF 434

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           FMGLQRK G   Q GQQFDIRG+V+EF+  INMY FWKPGM+I VSH+RRKQ+P +VFP+
Sbjct: 435 FMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPD 494

Query: 492 GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQS---ISPQKQDSL 548
           G+KR +  R   QQ  +   +  Q  SG+  K      D +  EK +    ISP  + S 
Sbjct: 495 GHKRAKPLRHEGQQVDTVCADMLQDQSGITEKGKKRKSDHEEEEKEKKQALISPPAEQSP 554

Query: 549 SPDHLA---PSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCED 604
            P+           S   +N +  +       Q ++      N + I ++T E GS  D
Sbjct: 555 MPEFFGGDPDGKWPSSKFANADCHLKVWSSFEQPVSRTDTNGNGTDIATLTKETGSTGD 613


>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
 gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 745

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/738 (60%), Positives = 534/738 (72%), Gaps = 51/738 (6%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLAPSSVRSGTGSNV-----EPVIPDKRVLNQEIAEGGDV------ 586
            S+SPQ  D +SP++ A ++  +    N+     E +  D   LN E  E  D+      
Sbjct: 551 ASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADN--LNTECTELTDLARNECN 608

Query: 587 SNSSVITSVTS------------EVGSCEDVGNESVAGSSEGNNGSVEGSNNPVS-SQSD 633
           S S  +  V S             +G C    +  V     G   +++ +   VS S +D
Sbjct: 609 SGSEQVLEVDSMAVVQECSDPAEPLGKCVTPDSVDVVACVSGQEENLDRNLRSVSISGTD 668

Query: 634 CCDADSQSLLENRHLDGNG--------------AFQDRVHEELELNAGLGSVLQSTSGID 679
                S+S  +NR  +G G                Q  + E+L+ N+ +  + +S     
Sbjct: 669 SPLLPSRSCGQNRDYEGFGFPAANSDPMGKKNLYSQSGMSEDLQSNSLVSGMEKSEDRAR 728

Query: 680 SETVVQKPVMRLSLTSTA 697
           SE+  QK  +RLSL ST 
Sbjct: 729 SES-FQKSQIRLSLKSTV 745


>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 694

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/663 (63%), Positives = 500/663 (75%), Gaps = 36/663 (5%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           KPIS+AGP +AD+QR  EL KFLVEAGLYES +E  +RE+VLG + +I K WVK+LT  R
Sbjct: 6   KPISLAGPLDADVQRTAELNKFLVEAGLYESADESARREEVLGELDKIVKVWVKQLTSQR 65

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           GY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH+ILA+ EE
Sbjct: 66  GYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEE 125

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           V++LQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  +VL D+DE TVRSL 
Sbjct: 126 VSQLQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDEATVRSLT 185

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRVADQIL+LVPN+E F TTLRCLK WA+RRGVYSNVTGFLGGVNWALLVARVCQLYPN
Sbjct: 186 GCRVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVARVCQLYPN 245

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           AVPSMLVSRFFRV+T WRWP PVMLCAI+E ELGF VWDPRKN RD+THHMPIITPAYPC
Sbjct: 246 AVPSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPC 305

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
           MNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NKA WSALFEP+ FFE+Y+NYLQVDI+A 
Sbjct: 306 MNSSYNVSTSTLRVMIEQFQFGNKICQEIEMNKASWSALFEPFNFFEAYKNYLQVDIIAE 365

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 439
           + +DL  WKGWVESRLRQLTL IERDTYGKLQCHPYP+EY D S+ CAHCAFFMGL RK 
Sbjct: 366 DDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRKE 425

Query: 440 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHP 499
           G  +QEGQQFDIRG+V+EF+  INMYMFWKPGME+ VSH+RRK+IP YVFPEGYKR R  
Sbjct: 426 GVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPRPQ 485

Query: 500 RLASQQRSSENGNEYQTG---SGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPS 556
           R  + Q  S+  N+   G   S LKRK D   +D   P   QS+   K+ S+SP H   S
Sbjct: 486 RHVNHQHQSDK-NDPGNGSPDSQLKRKHDSTGIDDTEP--CQSV---KRASISPGHPKTS 539

Query: 557 SVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEG 616
           S RSG  S+ EP+   ++ +    + G   S  S               GN+     S G
Sbjct: 540 SPRSGNVSD-EPISNSQQKVTSNASGGSQDSPGS---------------GNQDQTKCS-G 582

Query: 617 NNGSVEGSNNPVSSQSDC------CDADSQSLLENRHLDGNGAFQDRVHEELELNAGLGS 670
           ++ + E S + V+S S C      C  D  S    +H+D     +D +   + ++  L  
Sbjct: 583 SSHASEKSLDSVASGSKCVKIEAVCSGDVTS----KHVDCISPVKDSIAPTVAVSTTLKR 638

Query: 671 VLQ 673
           V +
Sbjct: 639 VAE 641


>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
          Length = 737

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 10  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 69

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 70  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 129

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 130 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 189

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 190 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 249

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 250 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 309

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 310 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 369

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 370 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 429

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 430 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 489

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 490 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 549

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 550 ASLSPQSLDIVSPENSA 566


>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 738

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 551 ASLSPQSLDIVSPENSA 567


>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 765

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 551 ASLSPQSLDIVSPENSA 567


>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 735

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 551 ASLSPQSLDIVSPENSA 567


>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
 gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
 gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 741

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 551 ASLSPQSLDIVSPENSA 567


>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
 gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 745

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 551 ASLSPQSLDIVSPENSA 567


>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 730

 Score =  844 bits (2181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 551 ASLSPQSLDIVSPENSA 567


>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
 gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
          Length = 716

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 11  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 70

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 71  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 131 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 191 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 251 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 311 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 371 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 431 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 490

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 491 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 550

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 551 ASLSPQSLDIVSPENSA 567


>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
          Length = 729

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/557 (72%), Positives = 467/557 (83%), Gaps = 10/557 (1%)

Query: 8   SSPP--PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIR 65
           S PP   PK YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++  +RE+VLGRI 
Sbjct: 10  SLPPLNSPKSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRID 69

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           QI K WVK+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REED
Sbjct: 70  QIVKHWVKQLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREED 129

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF ILH+ILAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS  S
Sbjct: 130 FFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSS 189

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           VL +VDEPTVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVN
Sbjct: 190 VLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVN 249

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD
Sbjct: 250 WALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRD 309

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK  WS+LFE Y+FF
Sbjct: 310 RYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFF 369

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E+Y+NYLQVDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ 
Sbjct: 370 EAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQ 429

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+P
Sbjct: 430 FLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLP 489

Query: 486 PYVFPEGYKRTRHPRLAS--QQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKR 537
           P+VFP GY+R R  R  +    +S E+G+   +GS +    KRK D E +D   + PEKR
Sbjct: 490 PFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKR 549

Query: 538 QSISPQKQDSLSPDHLA 554
            S+SPQ  D +SP++ A
Sbjct: 550 ASLSPQSLDIVSPENSA 566


>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
           sativus]
          Length = 544

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/509 (78%), Positives = 446/509 (87%), Gaps = 1/509 (0%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P   YGVTKPIS+AGP +AD+ RN ELEKFLV++ LYESKEE  KRE+VLGRI QI K W
Sbjct: 16  PVTNYGVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT LRGY++QMVEDANA+ FTFGSYRLGVHGPG+DID LCVGPSYV+RE DFF ILH
Sbjct: 76  VKQLTLLRGYTEQMVEDANAVXFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILH 134

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           NILAEMEEVT+LQPV DAHVPVM+FKF G+SIDLLYASIS LVV EDLDIS  SVL +VD
Sbjct: 135 NILAEMEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVD 194

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA
Sbjct: 195 EQTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 254

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           +VCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E ELGF VWDPR+N RD+ H MP
Sbjct: 255 QVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMP 314

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCMNSSYNVSTSTLRVMM+QF+YGN+ICEE++L+KAQWSALFEPYLFFE+Y+NY
Sbjct: 315 IITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNY 374

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           LQVDI+AA+ADDLLAWKGWVESR RQLTL IERDT G LQCHPYP EY DTSKPC+HCAF
Sbjct: 375 LQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAF 434

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           FMGLQRK G   Q GQQFDIRG+V+EF+  INMY FWKPGM+I VSH+RRKQ+P +VFP+
Sbjct: 435 FMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPD 494

Query: 492 GYKRTRHPRLASQQRSSENGNEYQTGSGL 520
           G+KR +  R   QQ  +   +  Q  SG+
Sbjct: 495 GHKRAKPLRHEGQQVDTVCADMLQDQSGI 523


>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
          Length = 701

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/711 (60%), Positives = 515/711 (72%), Gaps = 44/711 (6%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           SP   +QYG+TKPIS++GP+ +D+QR+RELE+FLV AGLYES+EE   RE+VL +I QI 
Sbjct: 13  SPEATRQYGITKPISLSGPSGSDLQRSRELEEFLVSAGLYESEEESALREEVLAQIDQIV 72

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K WVK+LTR +GY++QMVE++NA +FTFGSYRLGVHGPGADID LCVGP Y  +EEDFF 
Sbjct: 73  KQWVKQLTREKGYTEQMVEESNAKVFTFGSYRLGVHGPGADIDTLCVGPEYADQEEDFFI 132

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           +LH++LAEM EV EL  V DAHVPVMKFKF G+SIDLLYAS++  +V +DLDIS  SVL 
Sbjct: 133 LLHDMLAEMPEVMELNRVPDAHVPVMKFKFRGISIDLLYASVALRIVPDDLDISQESVLY 192

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           +VDE TVRSLNGCRV +QIL+LVPNVEHF TTLRC+KFWAKRRGVYSNVTGFLGGVNWAL
Sbjct: 193 NVDEQTVRSLNGCRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWAL 252

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYPNA+PSMLVSRFFRV+T WRWPNPVML +I E ELGF VWDPRKN RD+TH
Sbjct: 253 LVARVCQLYPNAIPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTH 312

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
           HMPIITPAYP MNSSYNVSTSTLRVM +QFQ GN +CE++E+NKA WSALF+PY FFE+Y
Sbjct: 313 HMPIITPAYPGMNSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPFFEAY 372

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
           +NYLQVDIVAA+ DDL  WKGWVESRLRQLTL IERDT+G LQCHPYP EYVD SK C H
Sbjct: 373 KNYLQVDIVAADQDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPH 432

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 488
           CAFFMGLQRK G ++QEGQQFDIRG+V+EF+ S+ MYMFWKPGM+I VSH+RRKQIP YV
Sbjct: 433 CAFFMGLQRKQGVLIQEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYV 492

Query: 489 FPEGYKRTRHPRLASQ-QRSSENGNE-------------------YQTGSGLKRKKDPES 528
           FPEG +R R  R A+Q  ++S  G E                     +     ++K   +
Sbjct: 493 FPEGVRRVRSGRAANQIGKTSPQGRESSPKCCNGNFGDDIVEECNANSAEKANKRKHDMT 552

Query: 529 VDQDGPEKRQSISPQ--KQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDV 586
            D    EKR ++SP   K  SLS   ++  S RSG  S                AE  D 
Sbjct: 553 TDVGKAEKRAAVSPNDVKSASLS---VSDVSNRSGLASQTSS------------AEEPDH 597

Query: 587 SNSSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENR 646
           S+S   T+    +    +VG +   G  +  NG         + +    +  S   L+N 
Sbjct: 598 SSS---TAGYGAIAKPVEVGEKPSKGCVK--NGDQLEQKRSFTQKESVEEIGSGKGLQNS 652

Query: 647 HLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA 697
            +   G  Q+   EELE +  +  +L S +G+ SETV QKPV+R+SL STA
Sbjct: 653 CILRAGKCQNG-SEELESSINVEMILPSHAGVKSETV-QKPVLRVSLASTA 701


>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 788

 Score =  828 bits (2140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/553 (72%), Positives = 457/553 (82%), Gaps = 10/553 (1%)

Query: 8   SSPP---PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRI 64
           SSPP     K YG+TKP+S+AGP  AD++RN ELEKFLV+ GLYESKEE  +RE+VL RI
Sbjct: 13  SSPPVVKALKTYGITKPLSIAGPCAADVKRNLELEKFLVDEGLYESKEETMRREEVLVRI 72

Query: 65  RQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE 124
            QI K WVK+LTR RGY+DQMV+DANA+IFTFGSYRLGVHGP ADID LCVGPSYV+REE
Sbjct: 73  DQIVKHWVKQLTRQRGYTDQMVDDANAVIFTFGSYRLGVHGPRADIDTLCVGPSYVNREE 132

Query: 125 DFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDM 184
           DFF IL ++LAEMEEVTELQPV DAHVPVMKFKF G+SIDLLYASIS LV+ +DLDIS+ 
Sbjct: 133 DFFIILRDMLAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNS 192

Query: 185 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
           SVL DVDE TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGV
Sbjct: 193 SVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV 252

Query: 245 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 304
           NWALLVAR+CQLYPNA+PSMLVSRFFRVY  WRWPNPVMLC I+E EL F VWDPRKN R
Sbjct: 253 NWALLVARLCQLYPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHR 312

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 364
           D+ H MPIITPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK QWS+LFE Y+F
Sbjct: 313 DRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMF 372

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 424
           FE+Y+NYLQVD++A +A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK
Sbjct: 373 FEAYKNYLQVDVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK 432

Query: 425 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
              HCAFFMGLQR  G   QE QQFDIRG+V+EF+  +NMYMFW+PGM++ VSH+RR+Q+
Sbjct: 433 KFRHCAFFMGLQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQL 492

Query: 485 PPYVFPEGYKRTRHPRLASQQRSSEN----GNEYQTGSGL-KRKKDPESVDQ--DGPEKR 537
           P +VFP+GYKR R  R  +QQ         G+   +  G  KRK D E++D   +  EKR
Sbjct: 493 PSFVFPKGYKRPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDTRPEKREKR 552

Query: 538 QSISPQKQDSLSP 550
            S SP   D++SP
Sbjct: 553 ASRSPHSLDAVSP 565


>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
 gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
          Length = 786

 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/597 (67%), Positives = 473/597 (79%), Gaps = 21/597 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T+P+S+AGP+ AD++RN ELEKFLV+ GLYESKEE  +RE+V+ RI QI K WVK
Sbjct: 21  KSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVK 80

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTR RGY+DQMVEDANA+IFTFGSYRLGVHGP ADID LCVGPSYV+REEDFF    +I
Sbjct: 81  QLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDI 140

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LAEMEEVTELQPV DAHVPVMKFKF G+SIDLLYASIS LV+ +DLDIS+ SVL DVDE 
Sbjct: 141 LAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQ 200

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVAR+
Sbjct: 201 TVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARL 260

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPII
Sbjct: 261 CQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPII 320

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK  WS+LF+ Y+FFE+Y+NYLQ
Sbjct: 321 TPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQ 380

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           VD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK   HCAFFM
Sbjct: 381 VDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFM 440

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQR  G   QE QQFDIRG+V+EF+  +NMYMFW+PGM++ VSH+RR+Q+P +VFP GY
Sbjct: 441 GLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGY 500

Query: 494 KRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISP 542
           KR+R  R  SQQ   E G+E   G G          KRK D E ++   +  EKR S S 
Sbjct: 501 KRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSL 556

Query: 543 QKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV 599
              D+ SPD    SS  + +G+    ++P  R   + +  G  V N + + +V  E 
Sbjct: 557 HTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVEA 607


>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
 gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
          Length = 787

 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/597 (67%), Positives = 473/597 (79%), Gaps = 21/597 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T+P+S+AGP+ AD++RN ELEKFLV+ GLYESKEE  +RE+V+ RI QI K WVK
Sbjct: 21  KSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVK 80

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTR RGY+DQMVEDANA+IFTFGSYRLGVHGP ADID LCVGPSYV+REEDFF    +I
Sbjct: 81  QLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDI 140

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LAEMEEVTELQPV DAHVPVMKFKF G+SIDLLYASIS LV+ +DLDIS+ SVL DVDE 
Sbjct: 141 LAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQ 200

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVAR+
Sbjct: 201 TVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARL 260

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPII
Sbjct: 261 CQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPII 320

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK  WS+LF+ Y+FFE+Y+NYLQ
Sbjct: 321 TPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQ 380

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           VD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK   HCAFFM
Sbjct: 381 VDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFM 440

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQR  G   QE QQFDIRG+V+EF+  +NMYMFW+PGM++ VSH+RR+Q+P +VFP GY
Sbjct: 441 GLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGY 500

Query: 494 KRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISP 542
           KR+R  R  SQQ   E G+E   G G          KRK D E ++   +  EKR S S 
Sbjct: 501 KRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSL 556

Query: 543 QKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV 599
              D+ SPD    SS  + +G+    ++P  R   + +  G  V N + + +V  E 
Sbjct: 557 HTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVEA 607


>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
 gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
          Length = 797

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/597 (67%), Positives = 473/597 (79%), Gaps = 21/597 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T+P+S+AGP+ AD++RN ELEKFLV+ GLYESKEE  +RE+V+ RI QI K WVK
Sbjct: 21  KSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVK 80

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTR RGY+DQMVEDANA+IFTFGSYRLGVHGP ADID LCVGPSYV+REEDFF    +I
Sbjct: 81  QLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDI 140

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LAEMEEVTELQPV DAHVPVMKFKF G+SIDLLYASIS LV+ +DLDIS+ SVL DVDE 
Sbjct: 141 LAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQ 200

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVAR+
Sbjct: 201 TVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARL 260

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPII
Sbjct: 261 CQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPII 320

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK  WS+LF+ Y+FFE+Y+NYLQ
Sbjct: 321 TPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQ 380

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           VD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK   HCAFFM
Sbjct: 381 VDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFM 440

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQR  G   QE QQFDIRG+V+EF+  +NMYMFW+PGM++ VSH+RR+Q+P +VFP GY
Sbjct: 441 GLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGY 500

Query: 494 KRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISP 542
           KR+R  R  SQQ   E G+E   G G          KRK D E ++   +  EKR S S 
Sbjct: 501 KRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSL 556

Query: 543 QKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV 599
              D+ SPD    SS  + +G+    ++P  R   + +  G  V N + + +V  E 
Sbjct: 557 HTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVEA 607


>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
 gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
 gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
 gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
 gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
 gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
          Length = 800

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/597 (67%), Positives = 473/597 (79%), Gaps = 21/597 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T+P+S+AGP+ AD++RN ELEKFLV+ GLYESKEE  +RE+V+ RI QI K WVK
Sbjct: 21  KSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVK 80

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTR RGY+DQMVEDANA+IFTFGSYRLGVHGP ADID LCVGPSYV+REEDFF    +I
Sbjct: 81  QLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDI 140

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LAEMEEVTELQPV DAHVPVMKFKF G+SIDLLYASIS LV+ +DLDIS+ SVL DVDE 
Sbjct: 141 LAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQ 200

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVAR+
Sbjct: 201 TVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARL 260

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPII
Sbjct: 261 CQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPII 320

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK  WS+LF+ Y+FFE+Y+NYLQ
Sbjct: 321 TPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQ 380

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           VD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK   HCAFFM
Sbjct: 381 VDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFM 440

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQR  G   QE QQFDIRG+V+EF+  +NMYMFW+PGM++ VSH+RR+Q+P +VFP GY
Sbjct: 441 GLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGY 500

Query: 494 KRTRHPRLASQQRSSENGNEYQTGSG---------LKRKKDPESVDQ--DGPEKRQSISP 542
           KR+R  R  SQQ   E G+E   G G          KRK D E ++   +  EKR S S 
Sbjct: 501 KRSRQSRHQSQQ-CREPGDE---GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSL 556

Query: 543 QKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV 599
              D+ SPD    SS  + +G+    ++P  R   + +  G  V N + + +V  E 
Sbjct: 557 HTLDAASPD----SSGITTSGTPQIGIVPGPRA--ECLVTGDLVCNVTSLPNVEVEA 607


>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
          Length = 760

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/706 (60%), Positives = 490/706 (69%), Gaps = 69/706 (9%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQYG+TKPIS+A P E D+Q+  ELEKFLVEAGLYES EE  +RE+VLG + +I KDW
Sbjct: 16  PQKQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH
Sbjct: 76  VKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           +ILA+ EEVTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVD
Sbjct: 136 DILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLR-CLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           E TVRSLNGCRVADQIL+LVPNVE     +  CL          + VTGFLGGVNWALLV
Sbjct: 196 EVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLV 252

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK  RD++HHM
Sbjct: 253 ARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHM 312

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+N
Sbjct: 313 PIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKN 372

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 430
           YLQVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCA
Sbjct: 373 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 432

Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFP 490
           FFMGL RK G  +QEGQQFDIRG+V+EF+  I MY +W+PGME+ VSH+RRKQIP YVFP
Sbjct: 433 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 492

Query: 491 EGYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSI 540
           EGYKR R      HP+  S +   E+G   ++  G  KRK D   V    P    KR SI
Sbjct: 493 EGYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASI 551

Query: 541 SPQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------ 582
           SP    S+SP H   SS  SG        S   PV      +     LN  +A       
Sbjct: 552 SP----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDS 607

Query: 583 ------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGNN 618
                                   G ++ N +  T   S     E V +E V   S G N
Sbjct: 608 VTSGSKCVGVEAVCPSDAKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGGN 667

Query: 619 GSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 664
            S E     +    D   A    L+EN H  GNG  Q  + EELE+
Sbjct: 668 KSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEI 705


>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
          Length = 761

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/707 (60%), Positives = 490/707 (69%), Gaps = 70/707 (9%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQYG+TKPIS+A P E D+Q+  ELEKFLVEAGLYES EE  +RE+VLG + +I KDW
Sbjct: 16  PQKQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF +LH
Sbjct: 76  VKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           +ILA+ EEVTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL DVD
Sbjct: 136 DILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLR-CLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           E TVRSLNGCRVADQIL+LVPNVE     +  CL          + VTGFLGGVNWALLV
Sbjct: 196 EVTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLV 252

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+E ELGF VWDPRK  RD++HHM
Sbjct: 253 ARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHM 312

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYPCMNSSYNVSTSTLRVMM+QFQ+GN IC+E++++KA WSALFEP+ FFE+Y+N
Sbjct: 313 PIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKN 372

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 430
           YLQVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCA
Sbjct: 373 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 432

Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFP 490
           FFMGL RK G  +QEGQQFDIRG+V+EF+  I MY +W+PGME+ VSH+RRKQIP YVFP
Sbjct: 433 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 492

Query: 491 EGYKRTR------HPRLASQQRSSENGNEYQTGSGL-KRKKDPESVDQDGPE---KRQSI 540
           EGYKR R      HP+  S +   E+G   ++  G  KRK D   V    P    KR SI
Sbjct: 493 EGYKRPRPSRHINHPQ-QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASI 551

Query: 541 SPQKQDSLSPDHLAPSSVRSGT------GSNVEPV------IPDKRVLNQEIAE------ 582
           SP    S+SP H   SS  SG        S   PV      +     LN  +A       
Sbjct: 552 SP----SISPVHQKTSSPPSGNIADASGASGGSPVSLANGNLEQANCLNSPLASEKSLDS 607

Query: 583 -------------------------GGDVSNSSVITSVTSEVGSCEDVGNESVAGSSEGN 617
                                    G ++ N +  T   S     E V +E V   S G 
Sbjct: 608 VTSGSKCVGVEAVCPSDATKEHDNCGSNMKNCTTTTVAVSLKRVAEKVVSELVGSESLGG 667

Query: 618 NGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL 664
           N S E     +    D   A    L+EN H  GNG  Q  + EELE+
Sbjct: 668 NKSGE----LLERAEDMGSA----LVENVHFGGNGVVQTGLPEELEI 706


>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
 gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
          Length = 633

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/614 (66%), Positives = 470/614 (76%), Gaps = 22/614 (3%)

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQ 144
           MVEDANA+I TFGSYRLGVHGPGAD+D LC+GPSYV+REEDFF+  H+ILA M+EVTELQ
Sbjct: 1   MVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQ 60

Query: 145 PVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVA 204
           PV DAHVPVMKFKFDG+SIDLLYASIS L+V E+LDISD+SVL+++DEPTVRSLNGCRVA
Sbjct: 61  PVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVA 120

Query: 205 DQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 264
           DQILKLVPN+E+F TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM
Sbjct: 121 DQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 180

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
           LVSRFFRVYT WRWPNPVMLC+I+E ELGFSVW P +N RD++H MPIITPAYPCMNSSY
Sbjct: 181 LVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSY 240

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 384
           NVS STLRVMM+QFQYGN ICE++ELNK  WSALF PY+FFE Y+N+LQ+D+VAA+ DDL
Sbjct: 241 NVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDDL 300

Query: 385 LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 444
            AWKGWVESRLRQLTLMIERDT GKLQCHPYP EY+D ++ C+H AFFMGLQRK GEVVQ
Sbjct: 301 RAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEVVQ 360

Query: 445 EGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA-- 502
           EGQQFDIRG+VE F+ SINMYMFWKPGM+I VSHIRR+QIP YVFP+G+KR+R  R    
Sbjct: 361 EGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTVP 420

Query: 503 ------SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPS 556
                 S Q +  +G E + G  +KRK D + V QD   K+   +P  + SL+P + A S
Sbjct: 421 VENRPKSLQENEVSGTELR-GRNIKRKYDDKGVKQDVVLKKHCANPFVE-SLTPGNYAVS 478

Query: 557 ------SVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESV 610
                 S  S + +N E    D+R+  +   E G  SNSS +TSV+SE GS E V + SV
Sbjct: 479 DCQELKSGESTSLTNSEQDELDRRMSPEAGTECG--SNSSGVTSVSSEDGSPEYVASVSV 536

Query: 611 AGSSEGNNGSVEGSNNPVSSQSDCCDADSQSL-LENRHLDGNGAFQDRVHEELELNAGLG 669
           AG  + +  +VE  NN  S       ADS  L +       N   QD +   LE  A  G
Sbjct: 537 AGYVDDSARAVEAMNN--SRFDTTYMADSVKLGIGTLASANNEVLQDTLQTHLEPIAMAG 594

Query: 670 SVLQSTS-GIDSET 682
             L ST    DSE 
Sbjct: 595 MFLDSTKESFDSEA 608


>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
          Length = 680

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/619 (63%), Positives = 464/619 (74%), Gaps = 22/619 (3%)

Query: 13  PKQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PK+Y G   P+S+AGPT AD+QR  ELEKFLVEAGLYE KEE  KRE VL  I  I K+W
Sbjct: 16  PKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LTR +GY++Q+VE ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF  LH
Sbjct: 76  VKQLTRKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            ILAE EEV ELQPV DAHVPV+KFKF G+SIDLLYASIS  V+  D DIS  SVL DVD
Sbjct: 136 GILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAKRRGVYSN+TGFLGGVNWALLVA
Sbjct: 196 EATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           RVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+  +LGFS+WDPRKN RD+ H MP
Sbjct: 256 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN +C+E+ELNKA W+ALFEP+ FFE+YR +
Sbjct: 316 IITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKANWNALFEPFHFFEAYRKF 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           L VDIVA + DDL  WKGW+ESRLRQLTL IERDT G LQCHPYP EY D +  CAHCAF
Sbjct: 376 LVVDIVAEDDDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECAHCAF 435

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           +MGL RK G + + GQQFDIRG+V+EF   I MY  WKPGM++ V+H+ R+Q+P YVF +
Sbjct: 436 YMGLSRKEG-LKKRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSYVFEQ 494

Query: 492 GYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPES---VDQDGPEKRQSISPQKQD 546
           GYK+      A+QQ  S+    +     S LKRK   +    VD     KR S+SP    
Sbjct: 495 GYKKPCPTMHANQQEQSDGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRASVSPPGVG 554

Query: 547 SLSPDHLAPSSVRSGTGSNVEPVIPDK--RVLNQEIAEGGDVSNSSVITSVTSEVGSCED 604
             +P HL         G++V  V+ D   + ++  +  G   S+S    ++     +   
Sbjct: 555 --TPPHL---------GNSVSNVVCDSPVKFVSSVVCSGAHASSSHDDINIEQAQLTTSP 603

Query: 605 VGNE--SVAGSSEGNNGSV 621
            G+E  S +G+S    G+V
Sbjct: 604 YGSEDTSASGTSCAAVGAV 622


>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
 gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
          Length = 672

 Score =  769 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/536 (69%), Positives = 429/536 (80%), Gaps = 7/536 (1%)

Query: 13  PKQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PK+Y G   P+S+AGPT AD+QR  ELEKFLVEAGLYE KEE  KRE VL  I QI K+W
Sbjct: 16  PKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLCEIGQIVKEW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LT  +GY+DQ+VE ANA++FTFGSYRLGVHGP ADID LCVGPSYV+REEDFF  LH
Sbjct: 76  VKQLTSKKGYADQLVEQANAVLFTFGSYRLGVHGPEADIDTLCVGPSYVNREEDFFVTLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            ILAE EEVTELQPV DAHVPV+KFKF G+SIDLLYAS+S  V+  D DIS  SVL DVD
Sbjct: 136 GILAEKEEVTELQPVPDAHVPVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAKRRGVYSN+TGFLGGVNWALLVA
Sbjct: 196 EATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           RVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+  +LGFS+WDPRKN RD+ H MP
Sbjct: 256 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCMNSSYNVS+STLRV+M+QFQ+GN IC+E+ELNKA W+ALFEP+ FFE+YR +
Sbjct: 316 IITPAYPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKANWNALFEPFHFFEAYRKF 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           L VDIVA N DDL  WKGW+ESRLRQLTL I+RDT G LQCHPYP EY D +  CAHCAF
Sbjct: 376 LVVDIVAENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECAHCAF 435

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           +MGL RK G   + GQQFDIRG+V+EF   I MY  W PGM++ V+H++R+Q+P YVF +
Sbjct: 436 YMGLSRKEGS-KKRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSYVFEQ 494

Query: 492 GYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPES---VDQDGPEKRQSISP 542
           GYK+      A+QQ  S+          S LKRK D +    V+     K  S+SP
Sbjct: 495 GYKKPCPTMHANQQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELHKSVKWASVSP 550


>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
 gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
          Length = 468

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/440 (78%), Positives = 390/440 (88%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S   PPKQYG+TKP+S+ GP EAD+QR  ELEKFLVEAGLYES +E  +RE+VLG++ QI
Sbjct: 3   SGSDPPKQYGITKPLSLLGPVEADLQRTAELEKFLVEAGLYESPDESARREEVLGKLDQI 62

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            KDWVK+LT  RGY+DQMVE+ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF
Sbjct: 63  VKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFF 122

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
            +LH ILA+ E+VTELQPV DAHVPVMKFKF G+SIDLLYAS+S LVV  DLDIS  SVL
Sbjct: 123 IVLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            DVDE TVRSLNGCRVADQI++LVPN+E+F TTLRCLK+WAKRRGVYSNVTGFLGGVNWA
Sbjct: 183 YDVDEATVRSLNGCRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           LLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLC+I+E E+GF VWDPRKN RD+ 
Sbjct: 243 LLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRC 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           HHMPIITPAYPCMNSSYNVSTSTLRVM++QFQ+GN IC+E+E+NKA WSALFEP+ FFE+
Sbjct: 303 HHMPIITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQFFEA 362

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA 427
           Y+NYLQVDI+A + +DL  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CA
Sbjct: 363 YKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCA 422

Query: 428 HCAFFMGLQRKPGEVVQEGQ 447
           HCAFFMGL RK G  +QEG 
Sbjct: 423 HCAFFMGLSRKEGVKIQEGH 442


>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
 gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
          Length = 548

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/523 (66%), Positives = 417/523 (79%), Gaps = 12/523 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  GVT+PIS AGPTEAD  R R+LEK L EAGLYES EE  +RE+VLGR+ Q+ K+WVK
Sbjct: 8   KYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVK 67

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +   +GYS+Q+ ++ANA IFTFGSYRLGVHGPG DID LCVGP +VSREEDFF + H +
Sbjct: 68  NICLRKGYSEQLTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGM 127

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L  M EVTEL PV DAHVPVM+FKF G+SIDLLYA ++   + EDLDIS  S+L ++DEP
Sbjct: 128 LEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEP 187

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV DQIL+LVPN+EHF TTLRC+K WA++RGVYSNVTGFLGGVNWALLVAR+
Sbjct: 188 SVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARI 247

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E  LG SVWDPRKN RD+TH MPII
Sbjct: 248 CQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPII 307

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS+STLRVM+++F   N ICE +E+NKA+WSALFEPY FF++Y+NYLQ
Sbjct: 308 TPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQ 367

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLM------IERDTYGKLQCHPYPHEYVDTSKPCA 427
           +D+ AA+ DDL  WKGWVESRLRQLTL       IE+ TYG LQCHP+P ++VD SK   
Sbjct: 368 IDVFAADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDESKEGK 427

Query: 428 HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPY 487
           HCAFFMGLQ++ G   QEGQQFDIR +VEEF+ S+  Y  WK GM+I VSH+RR+QIP Y
Sbjct: 428 HCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAY 487

Query: 488 VFPEGYKRTRHPRLASQQRSSENGN------EYQTGSGLKRKK 524
           VFP G K  R P+L+S +++ E G+       Y   +G +R K
Sbjct: 488 VFPGGTKPARPPKLSSSRKAREAGSIRGCNTSYVIEAGCERSK 530


>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
 gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
          Length = 496

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/489 (69%), Positives = 403/489 (82%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  GVT+PIS AGPTEAD  R R+LEK L EAGLYES EE  +RE+VLGR+ Q+ K+WVK
Sbjct: 8   KYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVK 67

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +   +GYS+Q+ ++ANA IFTFGSYRLGVHGPG DID LCVGP +VSREEDFF + H +
Sbjct: 68  NICLRKGYSEQVTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHGM 127

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L  M EVTEL PV DAHVPVM+FKF G+SIDLLYA ++   + EDLDIS  S+L ++DEP
Sbjct: 128 LEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDEP 187

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV DQIL+LVPN+EHF TTLRC+K WA++RGVYSNVTGFLGGVNWALLVAR+
Sbjct: 188 SVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARI 247

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E  LG SVWDPRKN RD+TH MPII
Sbjct: 248 CQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPII 307

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS+STLRVM+++F   N ICE +E+NKA+WSALFEPY FF++Y+NYLQ
Sbjct: 308 TPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQ 367

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +D+ AA+ DDL  WKGWVESRLRQLTL IE+ TYG LQCHP+P ++VD SK   HCAFFM
Sbjct: 368 IDVFAADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFM 427

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQ++ G   QEGQQFDIR +VEEF+ S+  Y  WK GM+I VSH+RR+QIP YVFP G 
Sbjct: 428 GLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGT 487

Query: 494 KRTRHPRLA 502
           K  R P++ 
Sbjct: 488 KPARPPKVT 496


>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/646 (56%), Positives = 457/646 (70%), Gaps = 35/646 (5%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS+AGPTE D+ + RELEK+L   GLYES+EE   RE+VLGR+ QI K WVK
Sbjct: 14  QRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEVLGRLDQIVKIWVK 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G+++Q+V +ANA IFTFGSYRLGVHGPGADID LCVGP + SR+EDFF  L  +
Sbjct: 74  NISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKM 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM+EVTEL PV DAHVPVMKFKF+G+S+DLLYA ++  V+ +DLDIS  S+L +VDE 
Sbjct: 134 LSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQ 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TV SLNGCRV DQ+L+LVPN++ F TTLRC++FWAKRRGVYSNV GFLGG+N ALLVAR+
Sbjct: 194 TVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARI 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E  LG SVWDPR+N +D+ H MPII
Sbjct: 254 CQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNS+YNV++STLRVM D+F+ G+ ICE +E +KA W  LFEPY FFESY+NYLQ
Sbjct: 314 TPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQ 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI A NADDL  WKGWVESRLRQLTL IER TYG LQCHP+P E+ D S+P  HC +FM
Sbjct: 374 IDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHC-YFM 432

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G  V EG+QFDIR +VEEFK S+N Y  WKPGM I VSH++R+ IP Y+FP G 
Sbjct: 433 GLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGGV 492

Query: 494 KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPE-SVDQDGPEKRQS----ISPQKQDSL 548
           + T   ++ ++ + S        G   K +      V  D   KR+     +    ++S 
Sbjct: 493 RPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKRSEDIMDNNPRNSK 552

Query: 549 SPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGG---------DVSNSSVITSVTSEV 599
           SP  LAP S                R +N++I+            D S  + I    SE 
Sbjct: 553 SPVSLAPPS----------------REVNEDISPISASSSCSMKFDESEVNSIGGQKSE- 595

Query: 600 GSCEDVGNESVAGSSEGNNGSVEGSN--NPVSSQSDCCDADSQSLL 643
             C +   E  +G S G NGSV  +   NPV + +D  ++  +  L
Sbjct: 596 KPCLNSPGEIPSGDS-GTNGSVTNNQQVNPVLAAADTSNSKEEEKL 640


>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
 gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
          Length = 770

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/553 (61%), Positives = 424/553 (76%), Gaps = 12/553 (2%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           + G+T PIS+ GPTE D+ ++RELEKFL + GLYES+EE   RE+VLGR+ QI K WVK 
Sbjct: 17  RLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSREEVLGRLDQIVKHWVKV 76

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++R +G ++Q+V++ANA IFTFGSYRLGVHGPGADID LCVGP + +REEDFF  LH +L
Sbjct: 77  ISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRML 136

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
           +EM EVTEL PV DAHVPV+KFKF G+SIDLLYA +S  V+ EDLDIS  S+L + DE T
Sbjct: 137 SEMPEVTELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSILQNADEQT 196

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           VRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR+C
Sbjct: 197 VRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARIC 256

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QL+PNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E  LG  VWDPR+N +D+ H MPIIT
Sbjct: 257 QLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIIT 316

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP MNSSYNVS STLR+M ++FQ GN ICE +E +KA W+ LFE + FF++Y+NYLQ+
Sbjct: 317 PAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYKNYLQI 376

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMG 434
           DI A N DDL  WKGWVESRLRQLTL IER T+  LQCHP+P E+ D S+P  HC++FMG
Sbjct: 377 DIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPL-HCSYFMG 435

Query: 435 LQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 494
           LQRK G    EG+QFDIR +VEEFK+S+NMY  WKPGMEI V+H++R+ IP +VFP G +
Sbjct: 436 LQRKQGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPSFVFPGGIR 495

Query: 495 RTRHPRLA--SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS-PD 551
            +R  +    S++ S+E   E   G G+      +  D  G  KR   +      ++ PD
Sbjct: 496 PSRPSKTTWDSKRSSAEKSGE---GKGVS-----DGSDDKGKRKRIDDNVANATKIAKPD 547

Query: 552 HLAPSSVRSGTGS 564
             +P S     GS
Sbjct: 548 STSPLSGEVNNGS 560


>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
 gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
          Length = 610

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/543 (66%), Positives = 430/543 (79%), Gaps = 13/543 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           G   P+S+A PT AD+ +  ELEKFLVEAGLYE +EE  KRE+VL  I QI K+WVK++T
Sbjct: 24  GADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVT 83

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +GYS+QMV++ANA++FTFGSYRLGVHGPGADIDALC+GPSYV REE+FF +L+  L+E
Sbjct: 84  IQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSE 143

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           MEEVTELQPV DAHVPVMKFKF GL IDLLYAS+S  V+  D DIS  SVL DVDE TVR
Sbjct: 144 MEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVR 203

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRVADQIL+LVPN E F  TLRCLK+WA+RRGVYSNVTG LGGV+WALLVARVCQL
Sbjct: 204 SLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQL 263

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHMPIITP 315
           YPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ +  LGF+VWDPRKN RD++H MPIITP
Sbjct: 264 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITP 323

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYPCMNSSYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE+Y  YL VD
Sbjct: 324 AYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVD 383

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
           IVA + DDL  WKGW+ESRLRQLTL IERDT G LQCHP P EY D S  CAHCAF+MGL
Sbjct: 384 IVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGL 443

Query: 436 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 495
            RK G  ++ GQ+FDIRG+V+EF   I MY  WK GM++ V+H+R+K+IP YVF +G ++
Sbjct: 444 SRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQK 502

Query: 496 TRHPR--LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQDGPEKRQSISPQK 544
           TR P    A QQ +S +N +E  T +      LKRK        VD     +R S+SP  
Sbjct: 503 TRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVSPAC 562

Query: 545 QDS 547
           +++
Sbjct: 563 EEA 565


>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
          Length = 683

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/552 (66%), Positives = 431/552 (78%), Gaps = 13/552 (2%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           SSP      G   P+S+A PT AD+ +  ELEKFLVEAGLYE +EE  KRE+VL  I QI
Sbjct: 14  SSPKRSGGGGADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQI 73

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K+WVK++T  +GYS+QMV++ANA++FTFGSYRLGVHGPGADIDALC+GPSYV REE+FF
Sbjct: 74  VKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFF 133

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             L+  L+EMEEVTELQPV DAHVPVMKFKF GL IDLLYAS+S  V+  D DIS  SVL
Sbjct: 134 VTLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVL 193

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            DVDE TVRSLNGCRVADQIL+LVPN E F  TLRCLK+WA+RRGVYSNVTG LGGV+WA
Sbjct: 194 CDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWA 253

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDK 306
           LLVARVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+ +  LGF+VWDPRKN RD+
Sbjct: 254 LLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDR 313

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
           +H MPIITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE
Sbjct: 314 SHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFE 373

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
           +Y  YL VDIVA + DDL  WKGW+ESRLRQLTL IERDT G LQCHP P EY D S  C
Sbjct: 374 AYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQC 433

Query: 427 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
           AHCAF+MGL RK G  ++ GQ+FDIRG+V+EF   I MY  WK GM++ V+H+ +K+IP 
Sbjct: 434 AHCAFYMGLSRKEGMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPL 492

Query: 487 YVFPEGYKRTRHPR--LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQDGPE 535
           YVF +G ++TR P    A QQ +S +N +E  T +      LKRK        VD     
Sbjct: 493 YVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSV 552

Query: 536 KRQSISPQKQDS 547
           +R S+SP  +++
Sbjct: 553 RRASVSPACEEA 564


>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
 gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
          Length = 602

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/539 (67%), Positives = 429/539 (79%), Gaps = 13/539 (2%)

Query: 21  PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRG 80
           P+S+A PT AD+ +  ELEKFLVEAGLYE +EE  KRE+VL  I QI K+WVK++T  +G
Sbjct: 20  PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79

Query: 81  YSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEV 140
           YS+QMV++ANA++FTFGSYRLGVHGPGADIDALC+GPSYV REE+FF +L+  L+EMEEV
Sbjct: 80  YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139

Query: 141 TELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNG 200
           TELQPV DAHVPVMKFKF GL IDLLYAS+S  V+  D DIS  SVL DVDE TVRSLNG
Sbjct: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199

Query: 201 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 260
           CRVADQIL+LVPN E F  TLRCLK+WA+RRGVYSNVTG LGGV+WALLVARVCQLYPNA
Sbjct: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259

Query: 261 VPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           VPSMLVSRFFRV+T W+WPNPVMLCAI+ +  LGF+VWDPRKN RD++H MPIITPAYPC
Sbjct: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
           MNSSYNVSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE+Y  YL VDIVA 
Sbjct: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVAD 379

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 439
           + DDL  WKGW+ESRLRQLTL IERDT G LQCHP P EY D S  CAHCAF+MGL RK 
Sbjct: 380 DDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 439

Query: 440 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHP 499
           G  ++ GQ+FDIRG+V+EF   I MY  WK GM++ V+H+R+K+IP YVF +G ++TR P
Sbjct: 440 GMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPP 498

Query: 500 R--LASQQ-RSSENGNEYQTGSG-----LKRKKDP---ESVDQDGPEKRQSISPQKQDS 547
               A QQ +S +N +E  T +      LKRK        VD     +R S+SP  +++
Sbjct: 499 TPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVSPACEEA 557


>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
          Length = 712

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/488 (68%), Positives = 397/488 (81%), Gaps = 2/488 (0%)

Query: 15  QY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           QY GVT+PIS+ GP+E D  +  ELEKFLV AGLYES+EE  +RE+VLGR+ QI K WV+
Sbjct: 14  QYLGVTEPISLGGPSEFDYIKTAELEKFLVSAGLYESQEEAVRREEVLGRLDQIVKVWVR 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++R +G+ +Q+V++ANA IFTFGSYRLGVHGPGADID LCVGP + +REEDFF  L+ +
Sbjct: 74  KISRNKGFGEQVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFIELYEM 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LA+M EVTEL PV DAHVPVMKFKF+G+SIDLLYA +S  V+ EDLDIS  S+L + DE 
Sbjct: 134 LADMPEVTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDLDISQDSILRNADEQ 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRV DQIL+LVPN+++F TTLRC+K WAKRRGVYSNV GFLGGVNWALLVAR+
Sbjct: 194 TVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGVNWALLVARI 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+PSMLV RFFRVYT WRWPNPVMLCAI+E  LG  VWDPRKN RD+ H MPII
Sbjct: 254 CQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS+STLRVM ++FQ  N ICEE+ELNK  W+ LFE Y FFE+Y+NYL+
Sbjct: 314 TPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPFFEAYKNYLE 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI A  ADDL  WKGW ESRLR LTL IER T+G LQCHP+P ++ D  +P  HC FFM
Sbjct: 374 IDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRP-YHCCFFM 432

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G  +QEG+QFDIR +V+EF+ S+ MY  WK GMEI VSHIRR+ IP +VFP G 
Sbjct: 433 GLQRKQGMPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGV 492

Query: 494 KRTRHPRL 501
           +  R  ++
Sbjct: 493 RPPRTTKM 500


>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 757

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/493 (66%), Positives = 400/493 (81%), Gaps = 1/493 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS+ GP E D+ + +ELEKFL  AGLYES+EE   RE+VLGR+ QI K WVK
Sbjct: 14  QRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVK 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G ++Q+V++ANA IFTFGSYRLGVHGPGADID LCVGP + +REEDFF  LH +
Sbjct: 74  AISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKM 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM EVTEL PV DAHVPVM+FKF G+SIDLLYA +S  V+ EDLD+S  S+L + DE 
Sbjct: 134 LSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQ 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRV DQIL+LVPN+++F TTLR ++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 194 TVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARI 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E  LG  VWDPRK  +D+ H MPII
Sbjct: 254 CQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS+STLR+M ++F+ GN I E +E NKA W+ L EPY FFE+Y+NYLQ
Sbjct: 314 TPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQ 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           ++I A NADDL  WKGWVESRLRQLTL IER TY  LQCHP+P ++ D S+P  HC +FM
Sbjct: 374 IEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFM 432

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G    EG+QFDIR +V+EFK S+ MY  WKPGMEI V H+RR+ IP +VFP G 
Sbjct: 433 GLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGV 492

Query: 494 KRTRHPRLASQQR 506
           + +R  ++AS++R
Sbjct: 493 RPSRPTKVASERR 505


>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
 gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/519 (66%), Positives = 412/519 (79%), Gaps = 16/519 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+G+TKPIS   PT+  ++R+ ELEK L + G+Y+ +EE  KRE+++ ++R + K WVK
Sbjct: 9   KQFGLTKPISYVKPTDFHIRRSFELEKVLWDGGVYQVEEEARKREEIIEKLRVVVKSWVK 68

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++TR +GY+D+MVE+ANALI TFGSYRLGVHGPG+DID LC+GPSYV+REEDFF  LHNI
Sbjct: 69  QVTRWKGYTDKMVENANALIVTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFIRLHNI 128

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L  ME V+EL P+  AHVPVMKFKF+G+SIDLLYAS+S LVV +DLDIS+ S+L + DEP
Sbjct: 129 LIGMEGVSELLPIPHAHVPVMKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADEP 188

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSL+GCRVADQIL+LVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGVN ALLVARV
Sbjct: 189 TVRSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARV 248

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA PSMLVSRFFRVYT W WPNPVMLC I++ ELGF VWDPR+N  D+ HHMPII
Sbjct: 249 CQLYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPII 308

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP MNSSY+VSTSTL  MM QF   N IC ++ELNK+ W ALFEP+LFF SY+NYLQ
Sbjct: 309 TPAYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLFFRSYQNYLQ 368

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           VDI A +ADDL AWKGWVESRLRQLTL +ER T GKL C P P EYVDTS+ C HC +FM
Sbjct: 369 VDITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCTYFM 428

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
           GL++KPG  V+ G+  DIR + +EFK  I NM+ FW PGMEI VSH+ + Q+P YVFP+ 
Sbjct: 429 GLRKKPG--VEVGEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVFPDE 486

Query: 493 Y-KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 530
           Y KR++  +  +QQ  +            KRK + E VD
Sbjct: 487 YRKRSQSSKSINQQHQN------------KRKINSEMVD 513


>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
           Group]
          Length = 652

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/533 (67%), Positives = 424/533 (79%), Gaps = 13/533 (2%)

Query: 27  PTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMV 86
           PT AD+ +  ELEKFLVEAGLYE +EE  KRE+VL  I QI K+WVK++T  +GYS+QMV
Sbjct: 2   PTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYSEQMV 61

Query: 87  EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPV 146
           ++ANA++FTFGSYRLGVHGPGADIDALC+GPSYV REE+FF  L+  L+EMEEVTELQPV
Sbjct: 62  KEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQPV 121

Query: 147 LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
            DAHVPVMKFKF GL IDLLYAS+S  V+  D DIS  SVL DVDE TVRSLNGCRVADQ
Sbjct: 122 PDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQ 181

Query: 207 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLV 266
           IL+LVPN E F  TLRCLK+WA+RRGVYSNVTG LGGV+WALLVARVCQLYPNAVPSMLV
Sbjct: 182 ILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLV 241

Query: 267 SRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 325
           SRFFRV+T W+WPNPVMLCAI+ +  LGF+VWDPRKN RD++H MPIITPAYPCMNSSYN
Sbjct: 242 SRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYN 301

Query: 326 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 385
           VSTSTLRV+M+QFQ+GN IC+E+ELNKA WS+LFEP+ FFE+Y  YL VDIVA + DDL 
Sbjct: 302 VSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDDDLR 361

Query: 386 AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQE 445
            WKGW+ESRLRQLTL IERDT G LQCHP P EY D S  CAHCAF+MGL RK G  ++ 
Sbjct: 362 LWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKIR- 420

Query: 446 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR--LAS 503
           GQ+FDIRG+V+EF   I MY  WK GM++ V+H+R+K+IP YVF +G ++TR P    A 
Sbjct: 421 GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPICAE 480

Query: 504 QQ-RSSENGNEYQTGS-----GLKRKKDP---ESVDQDGPEKRQSISPQKQDS 547
           QQ RS +N +E  T +      LKRK D      VD     +R S+SP  +++
Sbjct: 481 QQDRSGKNDSEVCTTTVSLVGQLKRKYDSVGGADVDSFKSVRRASVSPACEEA 533


>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
 gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/501 (66%), Positives = 413/501 (82%), Gaps = 7/501 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS+ GPTE D+ + RELEKFL +AGLYES+EE   RE+VLGR+ QI K+WVK
Sbjct: 5   QRLGITEPISLGGPTEYDVTKTRELEKFLQDAGLYESQEEAVSREEVLGRLDQIVKNWVK 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +  ++Q+V++ANA IFTFGSYRLGVHGPGADID LCVGP + +REEDFF  LH +
Sbjct: 65  VISRAKRLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRM 124

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM EVTEL PV DAHVPVM+FKF G+SIDLLYA +S  V+ EDLD+S  S+L++ DE 
Sbjct: 125 LSEMPEVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADEQ 184

Query: 194 TVRSLNGCRVADQILKLVPNVE---HFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           TVRSLNGCRV DQIL+LVPN++   +F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLV
Sbjct: 185 TVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLV 244

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR+CQL+PNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E  LG SVWDPR+N +D+ H M
Sbjct: 245 ARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLM 304

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP MNSSYNVS+STLR+M ++FQ GN ICE +E++KA+W  LFEP+ FFE+Y+N
Sbjct: 305 PIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEPFSFFEAYKN 364

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 430
           YLQ+DI A N DDL  WKGWVESRLRQLTL IER TY  LQCHP+P E+ D S+P  HC+
Sbjct: 365 YLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPL-HCS 423

Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFP 490
           +FMGLQRK G  V EG+QFDIR +V+EFK S+NMY  WKPGMEI V+H++++ IP +VFP
Sbjct: 424 YFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFVFP 483

Query: 491 EGYKRTRHPRLASQ--QRSSE 509
            G + +R P  A+   +RSSE
Sbjct: 484 SGVRPSR-PSKATWDGRRSSE 503


>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
 gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
          Length = 534

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/493 (67%), Positives = 401/493 (81%), Gaps = 2/493 (0%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           +P+S AGPT AD+ R R+LEK L  AGL ES+EE  KRE VLGR+ QI K WV+++   +
Sbjct: 2   EPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNK 61

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           G+S+++V++ANA IFTFGSYRLGVHGPG+DID LCVGPS+ +REEDFF  LHNILAE E 
Sbjct: 62  GFSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETEN 121

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           VTEL PV +AHVPVMKFKFDG+SIDLLYA +S   + EDLDISD S++ ++DE +V SLN
Sbjct: 122 VTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLN 181

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRV DQIL+LVPN++HF TTLRC+K+WAKRRGVYSNVTGFLGG+NWALLVAR+CQLYPN
Sbjct: 182 GCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPN 241

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG-FSVWDPRKNRRDKTHHMPIITPAY 317
           AVPS LVSRFFRVYT WRWPNPVMLC I+E + LG   VWDPRKN RDK+H MPIITPAY
Sbjct: 242 AVPSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301

Query: 318 PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIV 377
           PCMNSSYNVSTSTLR+M  +F  GN +CE++E+++A W  LFE + FFE+YRNYLQ+D+V
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVV 361

Query: 378 AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQR 437
           A +  D   WKGWVESRLRQLTL +E+DTYG LQCHP+P ++VD ++   HCA+FMGLQR
Sbjct: 362 AIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQR 421

Query: 438 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
           K G  + EGQQFDIR +VE+FKL++  Y  WKPGMEI VSH+RRKQIP +V+P G K  R
Sbjct: 422 KLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFVYPGGVKPAR 481

Query: 498 HPRLASQQRSSEN 510
             R  S   SS++
Sbjct: 482 PARQHSGSPSSDS 494


>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/480 (67%), Positives = 391/480 (81%), Gaps = 1/480 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS+ GP E D+ + +ELEKFL  AGLYES+EE   RE+VLGR+ QI K WVK
Sbjct: 14  QRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVK 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G ++Q+V++ANA IFTFGSYRLGVHGPGADID LCVGP + +REEDFF  LH +
Sbjct: 74  AISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKM 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM EVTEL PV DAHVPVM+FKF G+SIDLLYA +S  V+ EDLD+S  S+L + DE 
Sbjct: 134 LSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADEQ 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRV DQIL+LVPN+++F TTLR ++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 194 TVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVARI 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E  LG  VWDPRK  +D+ H MPII
Sbjct: 254 CQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS+STLR+M ++F+ GN I E +E NKA W+ L EPY FFE+Y+NYLQ
Sbjct: 314 TPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQ 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           ++I A NADDL  WKGWVESRLRQLTL IER TY  LQCHP+P ++ D S+P  HC +FM
Sbjct: 374 IEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFM 432

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G    EG+QFDIR +V+EFK S+ MY  WKPGMEI V H+RR+ IP +VFP GY
Sbjct: 433 GLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGY 492


>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
 gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
          Length = 752

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/526 (63%), Positives = 412/526 (78%), Gaps = 16/526 (3%)

Query: 14  KQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           KQ+ G+T+PIS+AGPTE D+ +  ELEK+L  AGLYES++E   RE+VLGR+ QI K WV
Sbjct: 13  KQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIVKIWV 72

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K ++R +G+++Q+V++ANA IFTFGSYRLGVHGPGADID LCVGP + +R+EDFF  L  
Sbjct: 73  KTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQK 132

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L+EMEEVTEL PV DAHVPVMKFKF+G+S+DLLYA ++  V+ EDLDIS  S+L +VDE
Sbjct: 133 MLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDE 192

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            TV SLNGCRV DQ+L+LVPN+++F TTLR ++FWAKRRGVYSNV GFLGG+N ALLV R
Sbjct: 193 QTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGR 252

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +CQLYPNA+P+MLVSRFFRVYT WRWPNPVMLCAI+E  LG SVWDPR+N RD+ H MPI
Sbjct: 253 ICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPI 312

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYPCMNS+YNV+TSTLR+M D+F+ G  ICE +E +KA W  LFEPY FFE+Y+NYL
Sbjct: 313 ITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYL 372

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           Q+DI A N DDL  WKGWVESRLRQLTL IE+ TYG LQCHPYP E+ D S+    C +F
Sbjct: 373 QIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQC-YF 431

Query: 433 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
           MGLQRK G  V EG+QFDIR +VEEFK ++N Y  WKPGM+I VSH++R+ IP ++FP G
Sbjct: 432 MGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPGG 491

Query: 493 Y------------KRTRHPRLASQQRS--SENGNEYQTGSGLKRKK 524
                        +R+   R+A Q +S  S+ G     G+  +RK+
Sbjct: 492 VRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKR 537


>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/544 (61%), Positives = 413/544 (75%), Gaps = 17/544 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS+AGPT+ D  +  ELEK+L   GLYES+EE   RE+VLGR+ QI K WVK
Sbjct: 14  QRLGITEPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVKIWVK 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G+++Q+V +ANA IFT GSYRLGVHGPGADID LCVGP + SR+EDFF  L  +
Sbjct: 74  NISRAKGFNEQLVHEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGGLQKM 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM+EVTEL PV DAHVPV+KFKF+G+S+DLLYA ++  V+ EDLDIS  S+L  VDE 
Sbjct: 134 LSEMQEVTELHPVPDAHVPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQSVDEQ 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TV SLNGCRV DQ+L+LVPN++ F TTLRC++FWAKRRGVYSNV GFLGG+N ALLVAR+
Sbjct: 194 TVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARI 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+P MLVSRFFRVYT WRWPNPVMLCAI+E  LG  VWDPR+N +D+ H MPII
Sbjct: 254 CQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TP YPCMNS+YNV++STLRVM D+F+ G+ ICE +E +KA W  LFEPY FFESY+NYLQ
Sbjct: 314 TPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQ 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI A NADDL  WKGWV SRLRQLTL IER TYG LQCHP+P E+ D S+P  HC +FM
Sbjct: 374 IDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHC-YFM 432

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G  V EG+QFDIR +VEEFK S+N Y  WKPGM+I VSH++R  IP Y+FP G 
Sbjct: 433 GLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPGGV 492

Query: 494 ------KRTRHPRLASQQRSSENGNEYQTGSG----------LKRKKDPESVDQDGPEKR 537
                 K T   + +S+ R+S +G   +   G           KRK+  +++D +    R
Sbjct: 493 RPTFPSKVTAENKQSSKSRASGHGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNNPRNSR 552

Query: 538 QSIS 541
             +S
Sbjct: 553 SPVS 556


>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
 gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
          Length = 534

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/493 (66%), Positives = 400/493 (81%), Gaps = 2/493 (0%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           +P+S AGPT AD+ R R+LEK L  AGL ES+EE  KRE VLGR+ QI K WV+++   +
Sbjct: 2   EPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNK 61

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           G+S+++V++ANA IFTFGSYRLGVHGPG+DID LCVGPS+ +REEDFF  LHNILAE E 
Sbjct: 62  GFSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETEN 121

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           VTEL PV +AHVPVMKFKFDG+SIDLLYA +S   + EDLDISD S++ ++DE +V SLN
Sbjct: 122 VTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLN 181

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRV DQIL+LVPN++HF TTLRC+K+WAKRRGVYSNVTGFLGG+NWALLVAR+CQLYPN
Sbjct: 182 GCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPN 241

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG-FSVWDPRKNRRDKTHHMPIITPAY 317
           AVPS L+SRFFRVYT WRWPNPVMLC I+E + LG   VWDPRKN RDK+H MPIITPAY
Sbjct: 242 AVPSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301

Query: 318 PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIV 377
           PCMNSSYNVSTSTLR+M  +F  GN +CE++E+++A W  LFE + FFE+YRNYLQ+D+V
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVV 361

Query: 378 AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQR 437
           A +  D   WKGWVESRLRQLTL +E+DTYG LQCHP+P ++VD ++   HCA+FMGLQR
Sbjct: 362 AIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQR 421

Query: 438 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
           K G  + EGQQFDIR +VE+FKL++  Y  WK GMEI VSH+RRKQIP +V+P G K  R
Sbjct: 422 KLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFVYPGGVKPAR 481

Query: 498 HPRLASQQRSSEN 510
             R  S   SS++
Sbjct: 482 PARQHSGSPSSDS 494


>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
 gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 748

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/640 (55%), Positives = 455/640 (71%), Gaps = 30/640 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T PIS++GPTE D+ + RELEK+L +AGLYES+E+   RE+VLGR+ QI K WVK
Sbjct: 14  QRLGITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEVLGRLDQIVKIWVK 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G ++Q+V++ANA IFTFGSYRLGVHGPGADID LCVGP + +REEDFF  LH +
Sbjct: 74  AISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHKM 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM EV+EL PV DAHVPVM+FK  G+SIDLLYA +S  V+ EDLDIS  S+L + DE 
Sbjct: 134 LSEMPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSILQNTDEQ 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRV D+IL+LVPN++ F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR+
Sbjct: 194 TVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARI 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+P+MLVSRFFRV+T WRWPNPVMLCA +E  LG  VWDPR+N +D+ H MPII
Sbjct: 254 CQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLR+M ++F+ G+ ICE +E NK+ W  LFEPY FFE+Y+NYLQ
Sbjct: 314 TPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPFFEAYKNYLQ 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI A N DD+  WKGWVESRLRQLTL IER TY  LQCHPYP ++ D S+P  HC +FM
Sbjct: 374 IDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPFHHC-YFM 432

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G     G+QFDIR +V+EFK S+N+Y   K GMEI VSH++R+ IP +VFP G 
Sbjct: 433 GLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPGGV 492

Query: 494 KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHL 553
           + +R  +L    R S       +       +  ES+D D   KR  I          D  
Sbjct: 493 RPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRI----------DDN 542

Query: 554 APSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSV-----ITSVTSEVGSCEDVGNE 608
           A +++R+G    +    P      +E+ E   VSN+S      +  + +   + E++ + 
Sbjct: 543 ANTNLRNGECLAMAHSHP------EEVHEVSQVSNTSSCSIKDVNFIPTSANNLENLAD- 595

Query: 609 SVAGSSEGNNGS--VEGSNNPVS----SQSDCCDADSQSL 642
            V+  + G++GS  V  S N VS      S+C +A+  ++
Sbjct: 596 -VSSQNNGDHGSLRVSPSTNNVSDAAADTSNCKEAEKLAI 634


>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 716

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/481 (65%), Positives = 386/481 (80%), Gaps = 1/481 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +++G+T+PIS+ GPTE D+ + RELEK L + GLYESKEE  +RE+VLG + QI K W+K
Sbjct: 9   QRFGITEPISLGGPTELDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIK 68

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G +D+++  ANA IFTFGSYRLGVHGPGADID LCVGP + +RE DFF  L  +
Sbjct: 69  TISRTKGLNDELLHLANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRM 128

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM EVTEL PV DAHVP+M FK +G+SIDLLYA +   V+ EDLDIS  S+L + DE 
Sbjct: 129 LSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNADEQ 188

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR+
Sbjct: 189 TVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARI 248

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+P+ML SRFFRVY  WRWPNPV+LC++DE   G  VWDPR+N +D+ H MPII
Sbjct: 249 CQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPII 308

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLR+M  +FQ G  ICE +E NKA W  LFEP+ FFE+Y+NYLQ
Sbjct: 309 TPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAFFEAYKNYLQ 368

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI AAN +DL  WKGWVESRLRQLTL IER TY  LQCHP+PH++ D S+P  HC++FM
Sbjct: 369 IDISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPL-HCSYFM 427

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G    EG+QFDIR +VEEFK ++N Y  W PGMEI VSHI+R+ +P YVFP G 
Sbjct: 428 GLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFPGGV 487

Query: 494 K 494
           +
Sbjct: 488 R 488


>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
 gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
          Length = 822

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/560 (59%), Positives = 408/560 (72%), Gaps = 44/560 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS++GPTE D+ + RELEK+L +AGLYE+++E   RE+VLGR+ QI K WVK
Sbjct: 15  QRLGITEPISLSGPTEYDVAKTRELEKYLQDAGLYENQDEAICREEVLGRLDQIVKIWVK 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            + R +G+++Q+V++ANA+IFTFGSYRLGVHGPGADID LCVGP + +R+EDFF  LH +
Sbjct: 75  TICRAKGFNEQLVKEANAMIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKM 134

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM EVTEL PV DAHVPVM FKF+G+S+DLLYA +S  V+ EDLD+S  ++L   DE 
Sbjct: 135 LSEMPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQ 194

Query: 194 TVRSLNGCRVADQILKLVPN-----------------------------VEHFCTTLRCL 224
           TVRSLNGCRV DQIL LVPN                             V++F TTLRC+
Sbjct: 195 TVRSLNGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRCV 254

Query: 225 KFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML 284
           K WAK RGVYSNV GFLGG+NWALLV R+CQLYPNA+P+MLVSRFFRVYT WRWPNPVML
Sbjct: 255 KLWAKCRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVML 314

Query: 285 CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTI 344
           C I E  LG  VWDPR+N +DK H MPIITPAYPCMNSSYNVS STLRVM ++FQ G+ I
Sbjct: 315 CTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEI 374

Query: 345 CEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           CE +E NKA W  LFEPY FFESY+NYL++DI A N DDL  WKGWV+SRLRQLTL IER
Sbjct: 375 CEAMEANKADWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLKIER 434

Query: 405 DTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 464
           +TYG LQCHP+P ++ D S+P  HC++FMGLQRK G    EG QFD+R +VEEFK S+N 
Sbjct: 435 NTYGMLQCHPHPGDFSDKSRP-LHCSYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSVNA 493

Query: 465 YMFWKPGMEICVSHIRRKQIPPYVFPEGY------------KRTRHPRLA--SQQRSSEN 510
           Y  WKPGM I +SH++R+ IP +VFP G             KR    R++   Q   S+ 
Sbjct: 494 YTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSKVTWVSKRRSELRVSGHGQAEKSQV 553

Query: 511 GNEYQTGSGLKRKKDPESVD 530
           G E    +  KRK+  +S D
Sbjct: 554 GKELGANNDRKRKQAEDSGD 573


>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/509 (63%), Positives = 398/509 (78%), Gaps = 4/509 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS AGPTE D+ + RELEKFL ++GLYE++EE  +RE+VLGR+ QI K WVK ++
Sbjct: 16  GVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVS 75

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R +G+++Q+V +ANA IFTFGSYRLGVHGPGADID LCVGP + +R+EDFF  LH +LAE
Sbjct: 76  RAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAE 135

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
             EV EL PV DAHVPVMKFKF+G+SIDLLYA +S  V+ EDLDIS  ++L +VDE TVR
Sbjct: 136 TPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVR 195

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR+CQL
Sbjct: 196 SLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQL 255

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNAVPS LVSRFFRVYT WRWPNPVMLC I+E  LG  VWDPR+N +D+ H MPIITPA
Sbjct: 256 YPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPA 315

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP MNSSYNVS STLR+M ++ Q GN I +E+E     W  LFEP+LFFE+Y+NYLQ+DI
Sbjct: 316 YPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDI 375

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N  DL  WKGWVESRLR LT  IERDT G LQCHP+P E+ DTS+   +C +FMGL+
Sbjct: 376 TAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYC-YFMGLR 434

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           RK G   QEG+QFDIR +V++FK ++ MY  WK GM I V HIRRK IP +VFP G +  
Sbjct: 435 RKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPP 494

Query: 497 RHPRLASQQRSSENGNEYQTGSGLKRKKD 525
           +  ++A +Q        + +    KRK+D
Sbjct: 495 QPMKVAGEQGQVSKPMGFNSQ---KRKRD 520


>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
 gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
           thaliana gb|AF255297 and contains a
           Nucleotidyltransferase PF|01909 domain. ESTs
           gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
           from this gene [Arabidopsis thaliana]
 gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
 gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
 gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
          Length = 713

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/481 (64%), Positives = 383/481 (79%), Gaps = 2/481 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +++GV++PISM GPTE D+ + RELEK L + GLYESKEE  +RE+VLG + QI K W+K
Sbjct: 9   QRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIK 68

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G +DQ++ +ANA IFTFGSYRLGVHGPGADID LCVGP + +RE DFF  L  +
Sbjct: 69  TISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRM 128

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+EM EVTEL PV DAHVP+M FK +G+SIDLLYA +   V+ EDLD+S  S+L + DE 
Sbjct: 129 LSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQ 188

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR+
Sbjct: 189 TVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARI 248

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+P++LVSRFFRV+  W WPN + LC+ DE  LG  VWDPR N +D+ H MPII
Sbjct: 249 CQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPII 308

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYPCMNSSYNVS STLR+M  +FQ GN ICE +E NKA W  LFEP+ FFE+Y+NYLQ
Sbjct: 309 TPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQ 368

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI AAN DDL  WKGWVESRLRQLTL IER  +  L CHP+PH++ DTS+P  HC++FM
Sbjct: 369 IDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPL-HCSYFM 426

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
           GLQRK G    EG+QFDIR +VEEFK ++N Y  W PGMEI V HI+R+ +P +VFP G 
Sbjct: 427 GLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGV 486

Query: 494 K 494
           +
Sbjct: 487 R 487


>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 587

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/509 (63%), Positives = 398/509 (78%), Gaps = 4/509 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS AGPTE D+ + RELEKFL ++GLYE++EE  +RE+VLGR+ QI K WVK ++
Sbjct: 16  GVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTVS 75

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R +G+++Q+V +ANA IFTFGSYRLGVHGPGADID LCVGP + +R+EDFF  LH +LAE
Sbjct: 76  RAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLAE 135

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
             EV EL PV DAHVPVMKFKF+G+SIDLLYA +S  V+ EDLDIS  ++L +VDE TVR
Sbjct: 136 TPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTVR 195

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR+CQL
Sbjct: 196 SLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQL 255

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNAVPS LVSRFFRVYT WRWPNPVMLC I+E  LG  VWDPR+N +D+ H MPIITPA
Sbjct: 256 YPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPA 315

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP MNSSYNVS STLR+M ++ Q GN I +E+E     W  LFEP+LFFE+Y+NYLQ+DI
Sbjct: 316 YPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDI 375

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N  DL  WKGWVESRLR LT  IERDT G LQCHP+P E+ DTS+   +C +FMGL+
Sbjct: 376 TAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYC-YFMGLR 434

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           RK G   QEG+QFDIR +V++FK ++ MY  WK GM I V HIRRK IP +VFP G +  
Sbjct: 435 RKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPP 494

Query: 497 RHPRLASQQRSSENGNEYQTGSGLKRKKD 525
           +  ++A +Q        + +    KRK+D
Sbjct: 495 QPMKVAGEQGQVSKPMGFNSQ---KRKRD 520


>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
          Length = 748

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/489 (62%), Positives = 380/489 (77%), Gaps = 1/489 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS++GPTE D+ R +E+EK L +AGLYES+EE   RE+VLG++ QI K W+K+ T
Sbjct: 12  GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 71

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R  G+ DQ V++ANA IFTFGSYRLGVHGPGADID LCVGP + +R E FF  L+++L +
Sbjct: 72  RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 131

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M EVTEL PV DAHVPV+KFK +G+SIDLLYA+++ +V+ EDLD+S  S+L++VDE TVR
Sbjct: 132 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 191

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV D+IL+LVPN+  F TTLR ++FWAKRRGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 192 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 251

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA PSML+SRFF+VY+ W+WPNPVMLC I+E  LG  VWDPR+N RD+ HHMPIITPA
Sbjct: 252 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 311

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP MNSSYNVS ST  VM+ +F   + IC+ ++  KA W ALFEPY FFESYRNYL+++I
Sbjct: 312 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 371

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N DDL  WKGWVESRLR L L IER T   L  HP P +++D+S+P  HC +FMGL 
Sbjct: 372 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLW 430

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           +K     QE +Q+DIR  V EFK +I+ Y  W+ GMEI VSH++RK IP +VFP G + +
Sbjct: 431 KKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 490

Query: 497 RHPRLASQQ 505
           R  R   ++
Sbjct: 491 RPSRTVGKE 499


>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
          Length = 748

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/489 (62%), Positives = 380/489 (77%), Gaps = 1/489 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS++GPTE D+ R +E+EK L +AGLYES+EE   RE+VLG++ QI K W+K+ T
Sbjct: 12  GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 71

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R  G+ DQ V++ANA IFTFGSYRLGVHGPGADID LCVGP + +R E FF  L+++L +
Sbjct: 72  RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 131

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M EVTEL PV DAHVPV+KFK +G+SIDLLYA+++ +V+ EDLD+S  S+L++VDE TVR
Sbjct: 132 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 191

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV D+IL+LVPN+  F TTLR ++FWAKRRGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 192 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 251

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA PSML+SRFF+VY+ W+WPNPVMLC I+E  LG  VWDPR+N RD+ HHMPIITPA
Sbjct: 252 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 311

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP MNSSYNVS ST  VM+ +F   + IC+ ++  KA W ALFEPY FFESYRNYL+++I
Sbjct: 312 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 371

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N DDL  WKGWVESRLR L L IER T   L  HP P +++D+S+P  HC +FMGL 
Sbjct: 372 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLW 430

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           +K     QE +Q+DIR  V EFK +I+ Y  W+ GMEI VSH++RK IP +VFP G + +
Sbjct: 431 KKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 490

Query: 497 RHPRLASQQ 505
           R  R   ++
Sbjct: 491 RPSRTVGKE 499


>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
 gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
          Length = 769

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/489 (62%), Positives = 380/489 (77%), Gaps = 1/489 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS++GPTE D+ R +E+EK L +AGLYES+EE   RE+VLG++ QI K W+K+ T
Sbjct: 33  GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 92

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R  G+ DQ V++ANA IFTFGSYRLGVHGPGADID LCVGP + +R E FF  L+++L +
Sbjct: 93  RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 152

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M EVTEL PV DAHVPV+KFK +G+SIDLLYA+++ +V+ EDLD+S  S+L++VDE TVR
Sbjct: 153 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 212

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV D+IL+LVPN+  F TTLR ++FWAKRRGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 213 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 272

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA PSML+SRFF+VY+ W+WPNPVMLC I+E  LG  VWDPR+N RD+ HHMPIITPA
Sbjct: 273 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 332

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP MNSSYNVS ST  VM+ +F   + IC+ ++  KA W ALFEPY FFESYRNYL+++I
Sbjct: 333 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 392

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N DDL  WKGWVESRLR L L IER T   L  HP P +++D+S+P  HC +FMGL 
Sbjct: 393 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLW 451

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           +K     QE +Q+DIR  V EFK +I+ Y  W+ GMEI VSH++RK IP +VFP G + +
Sbjct: 452 KKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 511

Query: 497 RHPRLASQQ 505
           R  R   ++
Sbjct: 512 RPSRTVGKE 520


>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
           Group]
          Length = 748

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/489 (61%), Positives = 379/489 (77%), Gaps = 1/489 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS++GPTE D+ R +E+EK L +AGLYES+EE   RE+VLG++ QI K W+K+ T
Sbjct: 12  GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 71

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R  G+ DQ V++ANA IFTFGSYRLGVHGPGADID LCVGP + +R E FF  L+++L +
Sbjct: 72  RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 131

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M EVTEL PV DAHVPV+KFK +G+SIDLLYA+++ +V+ EDLD+S  S+L++VDE TVR
Sbjct: 132 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 191

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV D+IL+LVPN+  F TTLR L+FWAKRRGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 192 SLNGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWALLVARICQL 251

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA PSML+SRFF+VY+ W+WPNPVMLC I+E  LG  VWDPR+N RD+ HHMPIITPA
Sbjct: 252 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 311

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP MNSSYNVS ST  VM+ +F   + IC+ ++  +A W ALFEPY FFESYRNYL+++I
Sbjct: 312 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPFFESYRNYLKIEI 371

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N DDL  WKGWVESRLR L L IER T   L  HP P +++D+S+P  HC +FMGL 
Sbjct: 372 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLW 430

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           +K     QE +Q+DIR  V EFK +I+ Y  W+ GMEI VSH++RK IP +VFP   + +
Sbjct: 431 KKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGRIRPS 490

Query: 497 RHPRLASQQ 505
           R  R   ++
Sbjct: 491 RPSRTVGKE 499


>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
 gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
          Length = 750

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/488 (61%), Positives = 376/488 (77%), Gaps = 1/488 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS++GPT+ D+ +  E+EK+L +AGLYES++E   RE+VLG++ Q  K W+K+ T
Sbjct: 12  GVTEPISLSGPTDKDLMQTTEVEKYLSDAGLYESQDEAVLREEVLGKLDQTVKAWIKKAT 71

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R+ GY +Q V +ANA IFTFGSYRLGVHGPGADID LCVGP + +R E FF  LH++LAE
Sbjct: 72  RISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDMLAE 131

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M EV+EL PV DAHVPV+ FK +G+SIDLLYA+++  V+ EDLD+S  S+LN+VDE TVR
Sbjct: 132 MPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILNNVDEQTVR 191

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV DQIL+LVPN+  F TTLR +++W KRRGVYSNV GFLGG+NWA+LV R+CQL
Sbjct: 192 SLNGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAILVGRICQL 251

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA PSML+SRFFRVY+ W+WPNPVMLC I+E  LG  VWDPR+N RD+ H MPIITPA
Sbjct: 252 YPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPA 311

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YPCMNSSYNVS ST  VM  +F     IC+ ++  KA W ALFEPY FFESY+NYL+V+I
Sbjct: 312 YPCMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNI 371

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N D+L +WKGWVESRLR L L IER ++  +  HPYP ++ D S+P  HC +FMGL 
Sbjct: 372 TARNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HCFYFMGLW 430

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           RK     QE +QFDIRG V EFK +I  Y  WK GM+I VSH++RK+IP +VFP G + +
Sbjct: 431 RKQTTQTQEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLFVFPGGVRPS 490

Query: 497 RHPRLASQ 504
           R  R A +
Sbjct: 491 RSSRTAHK 498


>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
          Length = 745

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/568 (55%), Positives = 401/568 (70%), Gaps = 17/568 (2%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT+PIS++GPTE D+ +  E+EK+L +AGLYE ++E   RE+VLG++ Q  K W+K+ 
Sbjct: 11  HGVTEPISLSGPTEKDLMQTAEVEKYLSDAGLYERQDEAILREEVLGKLDQTVKAWIKKA 70

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           TR+ GY +Q V +ANA IFTFGSYRLGVHGPGADID LCVGP + +R E FF  LH+ILA
Sbjct: 71  TRISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDILA 130

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           EM EV+EL PV DAHVPV+ FK +G+SIDLLYA+++  V+ EDLD+S  S+L++VDE TV
Sbjct: 131 EMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDEQTV 190

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNGCRV DQIL+LVPN+  F TTLR ++ W KRRGVYSNV GFLGG+NWA+LV R+CQ
Sbjct: 191 RSLNGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGRICQ 250

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNA PSML+SRFFRVY+ W+WPNPVMLC I+E  LG  VWDPR+N RD+ H MPIITP
Sbjct: 251 LYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITP 310

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYPCMNSSYNVS ST  VM+ +F     IC+ ++  KA W ALFEPY FFESY+NYL+V+
Sbjct: 311 AYPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVN 370

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
           I A N DDL  WKGWVESRLR L L IER ++  +  HPYP ++ D S+P  H  +FMGL
Sbjct: 371 ITARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HIFYFMGL 429

Query: 436 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 495
            RK     QE +QFDIRG V EFK +I  Y   K GM+I VSH++RK+IP +VFP G + 
Sbjct: 430 WRKQTTQAQETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVRP 489

Query: 496 TRHPRLASQQR----SSENGNEYQTGS--GLKRKKDPESVDQDGPEKRQSISPQKQDSLS 549
           +R  R   +      + +   + Q G+  G+    D + V   G   +Q           
Sbjct: 490 SRTSRTTHKNSRAIPTRDVSADDQVGNLLGVASCSDAQHVPCKGSYMKQP---------E 540

Query: 550 PDHLAPSSVRSGTGSNVEPVIPDKRVLN 577
           PD  A      G+ S + P +P+K VLN
Sbjct: 541 PD-FAGGFQLPGSISLLPPSLPNKVVLN 567


>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 730

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/544 (56%), Positives = 393/544 (72%), Gaps = 8/544 (1%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS++GPTE D+ +  E+EKFL +AGLYES+EE   RE+VLG++ Q  K W+K+ T
Sbjct: 10  GVSEPISLSGPTEKDVVQTAEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKAT 69

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R+ GY DQ V +ANA IFTFGSYRLGVHGPGADID LCVGP + +R + FF  LH++LAE
Sbjct: 70  RVSGYGDQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAE 129

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M EV+EL PV DAHVPV+ FK  G+SIDLLYA+++ +V+ +DLD+S  S+L++VDE  VR
Sbjct: 130 MPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSILHNVDEQAVR 189

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV DQIL+LVPN+  F TTLR +++W KRRGVYSNV GFLGG+NWA+LVAR+CQL
Sbjct: 190 SLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQL 249

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA PSML+SRFFRVY+ W+WPNPV LC I+E  LG  VWDPR+N RD+ H MPIITPA
Sbjct: 250 YPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPA 309

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YPCMNSSYNVSTST  VM+ +F  G  IC+ ++ N+A W  LFEPY FFE Y+NYL+V I
Sbjct: 310 YPCMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPFFELYKNYLEVGI 369

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A + DDL  WKGWVESRLR L L  ER T+  L  HP+P ++ D S+P  H  +FMGL 
Sbjct: 370 TARSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLW 428

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           RK     QE +QFDIRG V EFK ++  Y   + GM+I VSH++RK IP +VFP G +  
Sbjct: 429 RKQTAQPQEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPLFVFPGGVRPP 488

Query: 497 RHPRLASQQRSSENGN----EYQTGS--GLKRKKDPES-VDQDGPEKRQSISPQKQDSLS 549
           R  R A++   + + N    + Q G+  G +   DP+S +D  G  +   + P      +
Sbjct: 489 RSSRTAARSSRTVSRNVVTADGQVGNPLGAESWSDPQSALDHSGGYQSTLLVPSVSSKET 548

Query: 550 PDHL 553
           P  L
Sbjct: 549 PSIL 552


>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
          Length = 760

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/497 (60%), Positives = 372/497 (74%), Gaps = 1/497 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS++GPTE D+ +  E+EKFL +AGLYES+EE   RE+VLG++ Q  K W+K+ T
Sbjct: 31  GVSEPISLSGPTEKDVMQTTEVEKFLADAGLYESQEEAVSREEVLGKLDQTVKTWIKKAT 90

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           R  GY +Q V++ANA IFTFGSYRLGVHGPGADID LCVGP + +R + FF  LH++LAE
Sbjct: 91  RASGYGEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFFRCLHDMLAE 150

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M EV+EL PV DAHVPV+ FK  G+SIDLLYA+++ +V+ EDLD+S  S+L++VDE  VR
Sbjct: 151 MPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSILHNVDEQAVR 210

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV DQIL+LVPN+  F TTLR +++W KRRGVYSNV GFLGG+NWA+LVAR+CQL
Sbjct: 211 SLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVARICQL 270

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA PSML+SRFFRVY+ W+WPNPV LC I+E  LG  VWDPR+N RD+ H MPIITPA
Sbjct: 271 YPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPA 330

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YPCMNSSYNVS ST  VM+ +F  G  IC+ ++ N+A W  LFEPY FFE YRNYL+V I
Sbjct: 331 YPCMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPFFELYRNYLEVVI 390

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
            A N DDL  WKGWVESRLR L L  ER T+  L  HP+P ++ D S+P  H  +FMGL 
Sbjct: 391 SARNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLW 449

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRT 496
           RK     QE +QFDIRG V EFK S+  Y     GM+I VSH++RK IP +VFP G +  
Sbjct: 450 RKQTVQPQEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPLFVFPGGVRPP 509

Query: 497 RHPRLASQQRSSENGNE 513
           R  R A +   + + N+
Sbjct: 510 RSSRTAGRNGHAVSRND 526


>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 553

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 299/487 (61%), Positives = 371/487 (76%), Gaps = 1/487 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  GVT+PIS A PTE D    ++LE+ +    L  S+EE+ +RE+VLGR+ ++   WVK
Sbjct: 5   RYLGVTEPISTADPTEVDYVNTKQLEECVKGLALQGSREEEVRREEVLGRLDELVNVWVK 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G +D+ V +A   IFTFGSYRLGVHGPGADID LCVGP YV+REEDFF  LH++
Sbjct: 65  SMSRKKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDL 124

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + E VTEL  V DAHVPVM F+F+G+ IDLLYA +   V+ E+LDI   ++L +VDE 
Sbjct: 125 LQKTEGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDTILQNVDEQ 184

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV D+IL+LVPN+EHF TTLR +K WAKRRGVYSNV GFLGGVNWALLVAR+
Sbjct: 185 SVRSLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARI 244

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAVPS+L+SRFFRVY  WRWPNPVMLCAI+E  LG  VWDPR+N RD++H MPII
Sbjct: 245 CQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPII 304

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TP YPC NSS+NVS STLRVM ++F+ G++IC+ ++   A WS LFEPY FFESY+NYLQ
Sbjct: 305 TPTYPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFEPYPFFESYKNYLQ 364

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           +DI A + +DL  WKGWVESRLRQL L +E+DT+G LQCHP+P  + DTSK    C+FF+
Sbjct: 365 IDISAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSFFV 424

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
            LQRK G        FD+  ++ EFK S+N Y+ WKP M+I VSH+R KQIP YVFP G 
Sbjct: 425 ALQRKQG-APPSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGI 483

Query: 494 KRTRHPR 500
           +  R PR
Sbjct: 484 RPVRPPR 490


>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 494

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 297/487 (60%), Positives = 372/487 (76%), Gaps = 1/487 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  GVT+PIS A PTE D    ++LE+F+    L  S+EE+ +RE+VLG + ++   WVK
Sbjct: 9   RYLGVTEPISTADPTEVDYANTKQLEEFVKGLALQGSREEEVRREEVLGLLDELVNVWVK 68

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R++G +D+ V +A   IFTFGSYRLGVHGPGADID LCVGP YV+REEDFF  LH++
Sbjct: 69  MVSRMKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDL 128

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + + VTEL  V DAHVPVM F+F+G+ IDLLYA +   V+ E+LDI   S+L +VDE 
Sbjct: 129 LQKTDGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQNVDEQ 188

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV D+IL+LVPN+EHF TTLR +K WAKRRGVYSNV GFLGGVNWALLVAR+
Sbjct: 189 SVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARI 248

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAVPS+L+SRFFRVY  WRWPNPVMLCAI+E  LG  +WDPRKN RD++H MPII
Sbjct: 249 CQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPII 308

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TP YPC NSS+NVS STLRVM ++F+ G+ +C+ ++   A WS LFEPY FFESY+NYLQ
Sbjct: 309 TPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPFFESYKNYLQ 368

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
           ++I A + +DL  WKGWVESRLRQL L +E+DT+G LQCHP+P+ + DTSK    C+FF+
Sbjct: 369 IEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVCSFFV 428

Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
            LQRK G        FD+  ++ EFK S+N Y+ WKP M+I VSH+R KQIP YVFP G 
Sbjct: 429 ALQRKQG-AQHSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPTYVFPNGI 487

Query: 494 KRTRHPR 500
           +  R PR
Sbjct: 488 RPVRPPR 494


>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
          Length = 1097

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/453 (63%), Positives = 348/453 (76%), Gaps = 2/453 (0%)

Query: 54  DEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDAL 113
           +E+++ VL    +    +VK L  +    D   + A+  I  +  Y   VHGPGADID L
Sbjct: 235 EERKDDVLWADTKSGSLFVKSLYSIIEEHDDGHKHAHMYIGAWHVY-YTVHGPGADIDTL 293

Query: 114 CVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRL 173
           CVGP + +REEDFF  LH +L+EM EVTEL PV DAHVPVM+FKF G+SIDLLYA +S  
Sbjct: 294 CVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLW 353

Query: 174 VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGV 233
           V+ EDLD+S  S+L + DE TVRSLNGCRV DQIL+LVPN+++F TTLR ++FWAKRRGV
Sbjct: 354 VIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGV 413

Query: 234 YSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG 293
           YSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E  LG
Sbjct: 414 YSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLG 473

Query: 294 FSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA 353
             VWDPRK  +D+ H MPIITPAYPCMNSSYNVS+STLR+M ++F+ GN I E +E NKA
Sbjct: 474 LQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA 533

Query: 354 QWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH 413
            W  L EPY FFE+Y+NYLQ++I A NADDL  WKGWVESRLRQLTL IER TY  LQCH
Sbjct: 534 DWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCH 593

Query: 414 PYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
           P+P ++ D S+P  HC +FMGLQRK G    EG+QFDIR +V+EFK S+ MY  WKPGME
Sbjct: 594 PHPGDFSDKSRPF-HCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGME 652

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 506
           I V H+RR+ IP +VFP G + +R  ++AS++R
Sbjct: 653 IHVIHVRRRNIPNFVFPGGVRPSRPTKVASERR 685



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 21/166 (12%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS+ GP E D+ + +ELEKFL  AGLYES+EE   RE+VLGR+ QI K WVK
Sbjct: 14  QRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVKIWVK 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLG-VHGPGADIDALCVGPSYVSREEDFFFILHN 132
            ++R +G ++Q+V++ANA IFTFGSYRLG + G   ++D   + P               
Sbjct: 74  AISRAKGLNEQLVQEANAKIFTFGSYRLGAISGLKINLDKSKLMP--------------- 118

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRED 178
            +  +  V EL  V+D  V V+   + G    LL  +   LVV  D
Sbjct: 119 -VGRVSNVEELTVVIDCKVGVLPTTYLG----LLLGAAHNLVVAWD 159


>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
           max]
          Length = 702

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 295/522 (56%), Positives = 377/522 (72%), Gaps = 15/522 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++ G+T+PIS+ GPTE D+ + RELEK+L +AGLYE+++E     +VLGR+ QI K WVK
Sbjct: 15  QRLGITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQQE--AVXEVLGRLDQIVKIWVK 72

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G + Q+V++ANA IFTFGSY LGVH PGA+ID LCVGP + SR+EDFF  LH +
Sbjct: 73  IISRAKGLNKQLVQEANAKIFTFGSYXLGVHSPGANIDTLCVGPRHASRDEDFFGDLHRM 132

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L++M EVTEL PV DAHVPVM+FKF+G+ IDLLYA +S  V+ EDLDIS   +L + DE 
Sbjct: 133 LSKMPEVTELHPVPDAHVPVMRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADEE 192

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN--VTGFLGGVNWALLVA 251
           TV SLNGCRV D++L     +++FCTTLRC+KFWAK  GVY    VT +LGG+NWALLVA
Sbjct: 193 TVCSLNGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLVA 247

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R C L+PNA+P+MLVSRFFRVYT W WPNPVMLCAI+E  +G  +WDPR+   D+ H MP
Sbjct: 248 RTCXLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMP 307

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAY CMNSSYNVS+ TL +M ++FQ GN ICE    +   W+   + +    SY+NY
Sbjct: 308 IITPAYACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQDDLTWAFKLK-FPCSNSYKNY 366

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           LQ+DI   NADDL  WKGWVES LRQL L IER  YG LQCHP+P +  D S+P  HC+ 
Sbjct: 367 LQIDISGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRP-FHCSN 425

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           FM LQRK G  V +G QFDIR +VEEFK S+N+Y  W PGM++ V H++ + IP +VFP 
Sbjct: 426 FMALQRKQGVPVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVFP- 484

Query: 492 GYKRTRHP-RLASQQRSSENGNEYQTGSG--LKRKKDPESVD 530
           G  R  HP ++  + + S+ G     G+    KRK+  +SVD
Sbjct: 485 GSVRPSHPSKVTWEIKKSQEGKMAVLGANDDRKRKQAEDSVD 526


>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
          Length = 375

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/335 (77%), Positives = 292/335 (87%), Gaps = 1/335 (0%)

Query: 13  PKQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PK+Y G   P+S+AGPT AD+QR  ELEKFLVEAGLYE KEE  KRE VL  I  I K+W
Sbjct: 16  PKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVKEW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK+LTR +GY++Q+VE ANA++FTFGSYRLGVHGPGADID LCVGPSYV+REEDFF  LH
Sbjct: 76  VKQLTRKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVTLH 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            ILAE EEV ELQPV DAHVPV+KFKF G+SIDLLYASIS  V+  D DIS  SVL DVD
Sbjct: 136 GILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E TVRSLNGCRVADQIL+LVPNVE+F TTLRCLK+WAKRRGVYSN+TGFLGGVNWALLVA
Sbjct: 196 EATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           RVCQLYPNAVPSMLVSRFFRV+T W+WPNPVMLCAI+  +LGFS+WDPRKN RD+ H MP
Sbjct: 256 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE 346
           IITPAYPCMNSSYNVSTSTLRV+M+QFQ+GN +C+
Sbjct: 316 IITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQ 350


>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
 gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
          Length = 548

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 269/489 (55%), Positives = 345/489 (70%), Gaps = 13/489 (2%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PKQ    +PIS+ GPT AD++   ELEK L EAG+YES +E   R +VL  ++ I   WV
Sbjct: 8   PKQQMFGEPISLVGPTPADLEATAELEKVLREAGMYESPQESAVRAEVLRDLQGIVDRWV 67

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K+LT   GY D MV++A AL+  FGSYRLGVHG G+DIDAL VGPS+V R++DFF +L  
Sbjct: 68  KQLTLKHGYPDAMVDEATALLLPFGSYRLGVHGGGSDIDALVVGPSFVDRDQDFFGVLAG 127

Query: 133 ILAE-MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            LAE  E VT+LQPV  AHVPVMK +F G+ +DL+YAS++  VV  DLD+SD +VL  +D
Sbjct: 128 ALAEATEAVTDLQPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRDLDLSDRAVLRGLD 187

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
             T RS+NG RVAD+IL+LVP+   F T LRC+K WAK RGVYSNV+GFLGGV WA+LVA
Sbjct: 188 HVTARSMNGVRVADEILRLVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGVAWAILVA 247

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHM 310
           RVCQLYPNA PSMLVSRFF+V + W+WP PVMLC I+ + ELG  VWD R+N RD+TH M
Sbjct: 248 RVCQLYPNAAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRDRTHLM 307

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYR 369
           P+ITPAYPCMN +YNVS +T R++ +Q Q G+  C+E+     + W ALF+P+ FF +++
Sbjct: 308 PVITPAYPCMNCTYNVSQATQRIIKEQIQAGHVACQEIAAGGDRGWGALFQPFPFFRTHK 367

Query: 370 NYLQVD-IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
           +YLQVD  VA   ++L  WKGWVESRLRQL   +ERDT+G+L CH  P  Y D       
Sbjct: 368 SYLQVDATVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAY-DAEPHGLR 426

Query: 429 CA--FFMGLQR------KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR 480
           CA  FF+GL +      +P     +  QFD+R + +EF   +  Y FW+PG+E+ V H+R
Sbjct: 427 CASSFFVGLSKPQQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELAVKHVR 486

Query: 481 RKQIPPYVF 489
           RK +PPYV 
Sbjct: 487 RKDLPPYVM 495


>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
          Length = 552

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/500 (54%), Positives = 343/500 (68%), Gaps = 21/500 (4%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           +PIS+ GPT AD++    LEK L +AGLYES EE   RE VL  +R I   WVK LT  R
Sbjct: 11  QPISLLGPTPADLESTSRLEKHLRDAGLYESPEELAAREDVLCELRAIVDRWVKRLTAQR 70

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM-- 137
           GY D MV  A A +  FGSYRLGVHG G+DIDAL VGPSYV R+ DFF +L  +L+EM  
Sbjct: 71  GYPDGMVSQATAPVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDHDFFGVLGGVLSEMTD 130

Query: 138 EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRS 197
           + VTELQPV  AHVPV+K +F G+ +DLL+AS+   VV EDLD+ D SVL  +D  TVRS
Sbjct: 131 DAVTELQPVPGAHVPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGMDLATVRS 190

Query: 198 LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 257
           +NG RVAD+IL+LVP+   F TTLRC+K WAK RGVYSNV GF GGV WA+LVA VCQLY
Sbjct: 191 VNGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILVAFVCQLY 250

Query: 258 PNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRRDKTHHMPIITP 315
           PNA PS+LVSRFF+V   W+WPNPV L  I  D+ +L   VWDPR+N RD+TH MP++TP
Sbjct: 251 PNAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTP 310

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYPCMNS YNVS +TLR +  Q Q GN +C+++  + A W ALFEP+ FF+ Y++YL+VD
Sbjct: 311 AYPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPFHFFKEYKSYLRVD 370

Query: 376 IVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC---AHC 429
           +  A      DL  WKGWVESRLRQL + +E  T G L CHP P  Y   +KP       
Sbjct: 371 VKVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAY--AAKPTDLQRTT 428

Query: 430 AFFMGLQRKPGEVVQEGQQ-----FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
           +FF+GL +   +  ++ QQ     FD+R + EEFK  + MY+ W+PGME+ VSH RRK +
Sbjct: 429 SFFVGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDL 488

Query: 485 PPYV----FPEGYKRTRHPR 500
           P YV     P G+ + + P+
Sbjct: 489 PSYVLEQILPAGHLKRKRPQ 508


>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
          Length = 552

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 263/491 (53%), Positives = 343/491 (69%), Gaps = 13/491 (2%)

Query: 19  TKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRL 78
           ++PIS+ GPT AD++   +LEK L EAG+YES EE   R +VL  ++ I   WVK+L   
Sbjct: 10  SEPISLVGPTPADIEATAQLEKLLREAGMYESAEESAVRAEVLRDLQGIVDLWVKQLMLK 69

Query: 79  RGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME 138
            GY D MV++A A +  FGSYRLGV G G+DIDAL VGPS+V R++DFF +L  +LAE E
Sbjct: 70  HGYPDAMVDEATAFVLPFGSYRLGVLGGGSDIDALVVGPSFVDRDQDFFGVLAGVLAETE 129

Query: 139 EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSL 198
            VTEL PV  AHVPVMK +F G+ +DL+YAS++  VV  +LD+SD  VL  +D  T RS+
Sbjct: 130 AVTELHPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDHVTARSM 189

Query: 199 NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           NG RVAD+I++LVP+   F TTLRC+K WAK RGVYSNV+GFLGGV WA+LVARVCQLYP
Sbjct: 190 NGVRVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVARVCQLYP 249

Query: 259 NAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRRDKTHHMPIITPAY 317
           NAVPSMLVSRFF+V++ WRWP PVMLC I+ + ELG  VWD R+N  D++H MP+ITPAY
Sbjct: 250 NAVPSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAY 309

Query: 318 PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVD- 375
           PCMN +YNVS +T RV+ +Q Q G+  C+++     + W ALF+P  FF ++++YLQVD 
Sbjct: 310 PCMNCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSPFFSTHKSYLQVDA 369

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA---HCAFF 432
            VA  A++L  WKGWVESRLRQL   +ERDT+G+L CH  P  Y   ++P       +FF
Sbjct: 370 AVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAY--DAEPHGLRRASSFF 427

Query: 433 MGL-----QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPY 487
           +GL     Q KP         FD+R +V EF+  +  Y FW+PG+E+ V H+RR ++P Y
Sbjct: 428 VGLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRNKLPAY 487

Query: 488 VFPEGYKRTRH 498
           V  +   R  H
Sbjct: 488 VMQKIGGRNIH 498


>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
          Length = 556

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/492 (54%), Positives = 335/492 (68%), Gaps = 15/492 (3%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P+  GV +PIS+ GPT AD++    LE+ L E GLYES EE   RE+VL  +R +   WV
Sbjct: 6   PQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVDRWV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K LTR RGY D M + A AL+  FGSYRLGVHG G+DIDAL VGPSYV R+ DFF  L  
Sbjct: 66  KRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDRDFFGALAA 125

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
            LAE   V ELQPV  AHVPV+K +F G+ +DL+YA +   VV  DLD+S  SVL  +D 
Sbjct: 126 ALAETAGVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDL 185

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            T RSLNG RVAD+IL+LVP+   F TTLRC+K WAK RGVYSNV GFLGGV WA+LVAR
Sbjct: 186 ATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVAR 245

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFS--VWDPRKNRRDKTH 308
           VC LYPNA PSML+ RFFRV+  W+WP+PVML AI  D+ ELG S  VWDPR+N RDK H
Sbjct: 246 VCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIH 305

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---ELNKAQWSALFEPYLFF 365
            MPI+TPAYPCMNS YNVS +TLRV+ +Q   G+ +C+E+         W  LF+P+ FF
Sbjct: 306 LMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFF 365

Query: 366 ESYRNYLQVDIVAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 420
            +Y++YLQVD+       DDL  WKGWVESRLR L+  +E DT G L CH +P  Y    
Sbjct: 366 GAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEP 425

Query: 421 --DTSKPCAHCAFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWKPGMEICVS 477
             +  +     +FF+GL + P +  Q+  Q FD+R + E FK  + MY +W+PGME+ V+
Sbjct: 426 HNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVA 485

Query: 478 HIRRKQIPPYVF 489
           H+RRK +P YV 
Sbjct: 486 HVRRKDLPSYVL 497


>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
 gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
          Length = 586

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 240/362 (66%), Positives = 290/362 (80%), Gaps = 2/362 (0%)

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L+EM EVTEL PV DAHVP+M FK +G+SIDLLYA +   V+ EDLD+S  S+L + DE
Sbjct: 1   MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 60

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR
Sbjct: 61  QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 120

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +CQLYPNA+P++LVSRFFRV+  W WPN + LC+ DE  LG  VWDPR N +D+ H MPI
Sbjct: 121 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 180

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYPCMNSSYNVS STLR+M  +FQ GN ICE +E NKA W  LFEP+ FFE+Y+NYL
Sbjct: 181 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYL 240

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           Q+DI AAN DDL  WKGWVESRLRQLTL IER  +  L CHP+PH++ DTS+P  HC++F
Sbjct: 241 QIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPL-HCSYF 298

Query: 433 MGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
           MGLQRK G    EG+QFDIR +VEEFK ++N Y  W PGMEI V HI+R+ +P +VFP G
Sbjct: 299 MGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGG 358

Query: 493 YK 494
            +
Sbjct: 359 VR 360


>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
          Length = 556

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/492 (54%), Positives = 333/492 (67%), Gaps = 15/492 (3%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P+  GV +PIS+ GPT AD++    LE+ L E GLYES EE   RE+VL  +R +   WV
Sbjct: 6   PQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVDRWV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K LTR RGY D M + A AL+  FGSYRLGVHG G+DIDAL VGPSYV  + DFF  L  
Sbjct: 66  KRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFFGALAT 125

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
            LAE   V ELQPV  AHVPV+K +F G+ +DL+YA +   VV  DLD+S  SVL  +D 
Sbjct: 126 ALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDL 185

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            T RSLNG RVAD+IL+LVP+   F TTLRC+K WAK RGVYSNV GFLGGV WA+LVA 
Sbjct: 186 ATARSLNGVRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVAC 245

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFS--VWDPRKNRRDKTH 308
           VC LYPNA PSML+ RFFRV+  W+WP+PVML AI  D+ ELG S  VWDPR+N RDK H
Sbjct: 246 VCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIH 305

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---ELNKAQWSALFEPYLFF 365
            MPI+TPAYPCMNS YNVS +TLRV+ +Q   G+ +C+E+         W  LF+P+ FF
Sbjct: 306 LMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFF 365

Query: 366 ESYRNYLQVDIVAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 420
            +Y++YLQVD+       DDL  WKGWVESRLR L+  +E DT G L CH +P  Y    
Sbjct: 366 GAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEP 425

Query: 421 --DTSKPCAHCAFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMFWKPGMEICVS 477
             +  +     +FF+GL + P +  Q+  Q FD+R + E FK  + MY +W+PGME+ V+
Sbjct: 426 HNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVA 485

Query: 478 HIRRKQIPPYVF 489
           H+RRK +P YV 
Sbjct: 486 HVRRKDLPSYVL 497


>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
 gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
          Length = 287

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/287 (83%), Positives = 262/287 (91%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YG+TKPIS+AGPTE D+ RN ELEKFLV++GL ESK+E  KRE+VLGRI QI KDWVK
Sbjct: 1   KRYGITKPISVAGPTEPDLHRNAELEKFLVDSGLNESKDETIKREEVLGRIDQIVKDWVK 60

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +LTR RGY+DQMVE+ANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REEDFF  LH+ 
Sbjct: 61  QLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFITLHDK 120

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LAE EEVTELQPV DAHVPVMKFKF G+SIDLLYASIS LVV EDLDIS+ SVL +VDE 
Sbjct: 121 LAETEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQ 180

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRVADQILKLVPNVEHF TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV
Sbjct: 181 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 240

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC+I+E +LGF VWDPR
Sbjct: 241 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287


>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
 gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
           Full=Polynucleotide adenylyltransferase
 gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
          Length = 809

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/506 (45%), Positives = 318/506 (62%), Gaps = 18/506 (3%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P   GVT+PIS A P+  D + + ELE  L+   L+ES EE  KRE++LG++ QI ++W 
Sbjct: 50  PTILGVTEPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWA 109

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K+++  +GY +Q   +  A IFTFGSYRLGVHGPG+DID LCVGP ++ R  DFF  L +
Sbjct: 110 KQVSLKKGYPEQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMRS-DFFDDLSD 168

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDVD 191
           IL    E+TE   V DA VPV+   F G+ IDL+YA ++   + E+L D+ D S L ++D
Sbjct: 169 ILKVHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNID 228

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E ++ SLNGCRV DQILKLVPN+ +F   LRC+K WA RRG+YSN+ GFLGGV+WALL A
Sbjct: 229 EKSILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTA 288

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHM 310
           R+CQLYPN+ PS ++ RFF+VY +W+WP P++LC I E   LG  VW+P   +RDK H M
Sbjct: 289 RICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNP---KRDKAHLM 345

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP MNS+YNVS STL++M  +F  G  I  ++E  +  W  L E   FF  Y  
Sbjct: 346 PIITPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSF 405

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD----TSKPC 426
           Y+++D  + N +D   W+GW+ES+LR L   +E     K    PYP  + +     + P 
Sbjct: 406 YIEIDCYSMNEEDSRKWEGWIESKLRFLISNLESTPKMKFAV-PYPKGFTNNLHKANNPD 464

Query: 427 AHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRK 482
             C +FFMGL           +  D+  +V EF   I  ++  +P    M+I V +I++K
Sbjct: 465 QICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKK 524

Query: 483 QIPPYVFPEGYKRTRHPRLASQQRSS 508
           Q+P +V  EG      P   +++RSS
Sbjct: 525 QLPAFVKDEG---PEEPVKTTKKRSS 547


>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
          Length = 556

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/502 (50%), Positives = 313/502 (62%), Gaps = 35/502 (6%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV----------LG 62
           P+  GV +PIS+ GPT AD++    LE+ L E GLYES   D                LG
Sbjct: 6   PQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESARGDGGPGGGAPRPPRRRRPLG 65

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
                A          RG+              FGS  LGVHG G+DIDAL VGPSYV R
Sbjct: 66  EAPHAAAPGTPTAWPDRGHRPGA---------PFGS-TLGVHGRGSDIDALVVGPSYVDR 115

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
           + DFF  L   LAE   V ELQPV  AHVPV+K +F G+ +DL+YA +   VV  DLD+S
Sbjct: 116 DRDFFGALAAALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLS 175

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
             SVL  +D  T RSLNG RVAD+IL+LVP+   F TTLRC+K WAK RGVYSNV GFLG
Sbjct: 176 GRSVLRGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLG 235

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFS--VWD 298
           GV WA+LVA VC LYPNA PSML+ RFFRV+  W+WP+PVML AI+  + ELG S  VWD
Sbjct: 236 GVGWAILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWD 295

Query: 299 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---ELNKAQW 355
           PR+N RDK H MPI+TPAYPCMNS YNVS +TLRV+ +Q   G+ +C+E+         W
Sbjct: 296 PRRNPRDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGW 355

Query: 356 SALFEPYLFFESYRNYLQVDIVAANA--DDLLAWKGWVESRLRQLTLMIERDTYGKLQCH 413
             LF+P+ FF +Y++YLQVD+       DDL  WKGWVESRLR L+  +E DT G L CH
Sbjct: 356 DKLFQPFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCH 415

Query: 414 PYPHEYV-----DTSKPCAHCAFFMGLQRKPGEVVQEGQQ-FDIRGSVEEFKLSINMYMF 467
            +P  Y      +  +     +FF+GL + P +  Q+  Q FD+R + E FK  + MY +
Sbjct: 416 LHPQPYAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDY 475

Query: 468 WKPGMEICVSHIRRKQIPPYVF 489
           W+PGME+ V+H+RRK +P YV 
Sbjct: 476 WRPGMEVAVAHVRRKDLPSYVL 497


>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
          Length = 632

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/492 (47%), Positives = 316/492 (64%), Gaps = 31/492 (6%)

Query: 19  TKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRL 78
            +PIS A PT  D++  R+LE+ L + GLYES+EE E RE VLGR+  + K+W++ +  L
Sbjct: 8   VEPISQAEPTPQDLKHTRDLEQHLRDQGLYESQEEAELREVVLGRLDGLVKEWIRGVAAL 67

Query: 79  RGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF----FILHNIL 134
           RG+     EDANA IFTFGSYRLGVHGPGADID LCVGPSY +RE DFF      L  +L
Sbjct: 68  RGHPP---EDANAKIFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCLQAML 124

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
             + EV  L+ V  A+VPVM+ KF G+SIDLLYA +S  +VREDLDI     L   D+ +
Sbjct: 125 CALPEVLALRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHCDDQS 184

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           VRSLNGCRV D IL+ VP+V HF T LRCLK WA+RRGVYSNVTG+LGGVNWA+LVA VC
Sbjct: 185 VRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILVAYVC 244

Query: 255 QLYP---------NAVPSMLVSRFFRVYTMWRWPNPVMLCAID-EAELGFSVWDPRKNRR 304
           +L P            P + V    +VY+ W WP P+ML AI+ +  L   VWDPR+N R
Sbjct: 245 KLQPCLLASPPHLGPAPCLPVP---QVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENPR 301

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ----WSALFE 360
           D+TH MPIITPAYPCMNSSYNVS  TL VM ++F+ G+ +C  +  +       W+ L E
Sbjct: 302 DRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLLE 361

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FFE ++++LQV+++A++ +D   W+GWV SR+R L  + ++    + Q        V
Sbjct: 362 PLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMRLLIKVDQQQQQQQQQQDGGGGGSV 421

Query: 421 DTSKPCAH----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
             + P A     C +FMGL +K   ++ +  + D+   V EF   +  +   + GM+I V
Sbjct: 422 --ADPPAQQQPRCFYFMGLSKKKAMIIPQS-KVDLTQPVNEFAHKVKEFEQRREGMDISV 478

Query: 477 SHIRRKQIPPYV 488
            H+ ++Q+P +V
Sbjct: 479 RHLLQRQLPEWV 490


>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
          Length = 834

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/508 (44%), Positives = 318/508 (62%), Gaps = 8/508 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T  IS+A P E D +  R+L + +   G++E +EE   R  VLG++    K+
Sbjct: 15  PPQKHYGITSAISLAPPREIDHEYTRKLCEAMQPFGVFEDEEELNHRLAVLGKLNNFVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W+ E++ L+      +      IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFQSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
              L + EE+ +L+ V DA VPV+KFKFDG+ IDLL+A ++   + ++LD+   S+L ++
Sbjct: 134 FEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNAV + LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVSTST  +M ++F+YG ++ +E+   KA+W  LFEP  FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHP--YPHEYVDTSKPCA 427
           Y+ +   A+  ++ L W G VES++R L   +ER+ Y  L   +P  +P    + S+   
Sbjct: 374 YIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRSENDF 433

Query: 428 HCAFFMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
            C +F+G+  K     E V     +DI+   +      N     K GM+I  +H+++KQ+
Sbjct: 434 VCMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 493

Query: 485 PPYVFPEGYKRTRHPRLASQQRSSENGN 512
             Y+ PE  +R +   +A   R S  GN
Sbjct: 494 HQYLPPELVQRKKR-SIAEVNRGSNGGN 520


>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
          Length = 565

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/539 (41%), Positives = 341/539 (63%), Gaps = 17/539 (3%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           G+T  IS A P  +D+ + +ELE+ L   G++ES++E   R  +LG++  + K W+K+++
Sbjct: 30  GMTSAISTAPPKPSDLLKTQELEEALKPFGVFESEQELNHRMVILGKLYSLVKQWIKDVS 89

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +   + + E+    I+TFGSYRLGVH  GADIDALCV P ++SR  DFF   + +L +
Sbjct: 90  ISKNMPESVAENVGGKIYTFGSYRLGVHNRGADIDALCVAPRHISRN-DFFGSFYELLKK 148

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
             EVT+L+ V +A VPV+K  FDG+ ID+L+A +    + + +D+ D  +L ++D+  VR
Sbjct: 149 QPEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLLLKEIPDSMDLRDDLLLKNLDQKCVR 208

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV D+IL+LVPNV++F   LR +K WAKR G+YSN  G+LGGV+WA+LVAR CQL
Sbjct: 209 SLNGCRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIYSNALGYLGGVSWAMLVARTCQL 268

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA P+ LV +FF V++ W+WP PV+L       LGF+VWDPR N +D+ H MPIITPA
Sbjct: 269 YPNAAPATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITPA 328

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP  NS++NVS ST +++M++F+ G  + +++ L+K  W  LFEP LFF  Y++++ + +
Sbjct: 329 YPQQNSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQTWDKLFEPPLFFMKYKHFIVLLV 388

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPC-AHCA-FFM 433
            A + +D L W G VES+ R L   +ER+ +  L   +P     +++ +    HC+ +F+
Sbjct: 389 SAESPEDHLEWCGLVESKFRLLIGTLERNQHITLAHINPESFSLLESQRESNTHCSMWFI 448

Query: 434 GLQRKPGEVVQEGQQFDIRG---SVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFP 490
           GL+    E +     FDI+    +V+   L+I+M    K GM++   H++RKQ+  Y+ P
Sbjct: 449 GLEFAKSENLNVNLTFDIQQFTETVQNHALNISML---KEGMKLEARHVKRKQLYQYLSP 505

Query: 491 EGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS 549
              KR R   +  + +S  NG + +     KR  DP + D D P K+  +S +   ++S
Sbjct: 506 SLLKRERKTSITVKSQS--NGTDSK-----KRLSDPGNSDSDNPNKKIRLSEEMHSTVS 557


>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
          Length = 504

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/508 (45%), Positives = 307/508 (60%), Gaps = 42/508 (8%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           +P S A PT  D Q+  +LE  L E GLYES EE   RE+VLGR+ ++ K+WV+ +    
Sbjct: 1   EPFSRAPPTTKDFQQTADLELCLREQGLYESNEEAVLREEVLGRLDRLVKEWVQRVCAWL 60

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF----FILHNILA 135
           G  +    + NA IFTFGSYRLGVHGPGADID LCVGP +VSR+  FF      L  +L+
Sbjct: 61  GLGEFGEVETNAKIFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKMLS 120

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           ++ EVTELQPV+D+ VPV+K KF G+SIDLLYA ++  VV E+LD+  +S L + D+ +V
Sbjct: 121 DLPEVTELQPVVDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKSV 180

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNGCRV D +L  V ++E F T LR +K WA+RRG+YSNV G+LGGVNWA+LVA  C+
Sbjct: 181 RSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTCK 240

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYP  + S++V RFF+V+  W WP P+ML  I+   +G  VWDPR N RD  H MPIITP
Sbjct: 241 LYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITP 300

Query: 316 AYPCMNSSYNVSTSTLRVM------------MDQFQYGNTICEEV--ELNKAQWSALFEP 361
           AYP  NSSYNVS STL  M             ++F++G  +C  +  E    +W  L EP
Sbjct: 301 AYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEP 360

Query: 362 YLFFESYRNYLQVDIVAANADDLL-------------AWKGWVESRLRQLTLMIERDTYG 408
             FF +YRNYLQ  +    +  +              AW GWV SRLRQL + +E     
Sbjct: 361 VPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE----P 416

Query: 409 KLQCHPYPHEYVDTSKPCA-----HCAFFMGLQRKPGEVVQEGQ--QFDIRGSVEEFKLS 461
            +   P+P        P A      C +FMGL++KP      G+    ++   V+EFK  
Sbjct: 417 FVTVRPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQ 476

Query: 462 INMYMFWKPGMEICVSHIRRKQIPPYVF 489
           +  Y+ WK GM + ++H  +K +P +V 
Sbjct: 477 VMGYLSWKEGMHVLITHQMQKALPSFVL 504


>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
          Length = 584

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/535 (42%), Positives = 326/535 (60%), Gaps = 58/535 (10%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS A PT  D + +RELE+FL    LYE+ +E ++REQVL  + Q+  +WV+ ++
Sbjct: 16  GVTEPISTATPTPLDYRLSRELEEFLHNRNLYENNKEAQRREQVLAELHQLINEWVRRVS 75

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI------- 129
           R +G ++++V +  A +FTFGSYRLGV+ P ADID LC+ P YV R  D F I       
Sbjct: 76  RSQGIAEEIVSETEAKLFTFGSYRLGVNPPNADIDTLCIVPRYVERNRDVFGIPSESGSV 135

Query: 130 ------LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISD 183
                 L NI     ++ ++ PV DAHVPV+KFKF G+ IDLL A +    + E LDI D
Sbjct: 136 PEEENVLVNIFKSHPKIEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSKLPERLDILD 195

Query: 184 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 243
            S+L +VD+ T RS+NG RV D IL+LVPNVE F TTLR +KFWAK RG+YSNV GFLGG
Sbjct: 196 DSILRNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGG 255

Query: 244 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRK 301
           V+WA+LVAR+CQLYP+A  ++++SRFFRVY+ W+WPNPV+L +I   +   GF VW+P  
Sbjct: 256 VSWAILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAV 315

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV------------- 348
              D+ H MP+ITPAYP MNS++NVS +TLR++ ++   G  I +++             
Sbjct: 316 FPADRKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTIST 375

Query: 349 ---------------------ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAW 387
                                E     WS LFE   FF  ++NYLQ+++++  A++   W
Sbjct: 376 EDTENDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKW 435

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGLQ----RKPGEV 442
            G+VES+LR LTL +E  ++  +  +PYP  Y  T      C +FF+GL     + P + 
Sbjct: 436 HGFVESKLRVLTLKLEILSHTLI--YPYPVPY--TRPGVQFCESFFIGLSFSLPKLPNQN 491

Query: 443 VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
             + ++ D+ G V E+   +  + F    ME+ V H++RK +P YVF +   R+R
Sbjct: 492 GSKERKIDMSGPVSEWVNYVLSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHRSR 546


>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
          Length = 428

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/430 (53%), Positives = 272/430 (63%), Gaps = 31/430 (7%)

Query: 264 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 323
           MLVSRFFRV+T W+WPNPVMLC+I+E ELGF VWDPRKN RD+ HHMPIITPAYPCMNSS
Sbjct: 1   MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60

Query: 324 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 383
           YNVSTSTLRVM++QFQ+GN IC+E+E+NK  W ALFEP+ FFE+Y+NYLQVDI+A + +D
Sbjct: 61  YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 120

Query: 384 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 443
           L  WKGWVESRLRQLTL IERDTYG LQCHPYPHEY D S+ CAHCAFFMGL RK G  +
Sbjct: 121 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 180

Query: 444 QEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR---TRHPR 500
           QEGQQFDIRG+V+EF+  INMYMFWKPGME+ VSH+RRKQ+P YVFPEGYKR   +RH  
Sbjct: 181 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 240

Query: 501 LASQQRSSENGNEYQT-GSGLKRKKDPESVDQDGPEKRQSISP-----QKQDSLSPDHL- 553
             S +  +E+G   ++  S LKRK D    D     KR S SP       Q   + D   
Sbjct: 241 HQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSPVHPKNSPQSGSTGDETR 300

Query: 554 -------APSSVRSGTGSNVEPV--IPDKRVLNQEIAEGGDVSNSSVITS---------- 594
                  APS    G+ ++ +     PD  +        G V +   I+           
Sbjct: 301 CNNQIKRAPSDASGGSPASPQASERSPDTILSAPRCTTTGAVCSGDAISKHSSVPLVENC 360

Query: 595 VTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAF 654
            T  V  C  +   +    SE       GSNN           D   L EN    GNG  
Sbjct: 361 TTPTVAVCTTLKRVAEKVVSELVGSERLGSNNSAELLESMEKED--VLAENVRFGGNGVA 418

Query: 655 QDRVHEELEL 664
           Q  + EELE+
Sbjct: 419 QGGLPEELEV 428


>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
          Length = 861

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/506 (43%), Positives = 313/506 (61%), Gaps = 10/506 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T  IS+A P E D    ++L   +   G++E +EE   R  VLG++    K+W+ 
Sbjct: 16  KHYGITSAISLAPPREIDHHYTKKLCDAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIA 75

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++ L+      +      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 76  EISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQSFFEK 134

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EE+ +L+ V DA VPV+KFKFDG+ IDLL+A ++   + ++LD+   S+L ++D  
Sbjct: 135 LKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIR 194

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 195 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MPII
Sbjct: 255 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 314

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  +M ++F+YG ++ +E+   KA+WS LFEP  FF+ Y++Y+ 
Sbjct: 315 TPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIV 374

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
           +   A+  ++ L W G VES++R L   +ER+ Y  L  H  P  +  + +      F  
Sbjct: 375 LAASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDFVS 433

Query: 432 --FMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
             F+G+  K     E V     +DI+   +      N     K GM+I  +H+++KQ+  
Sbjct: 434 MWFIGIIFKKMENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNL 493

Query: 487 YVFPEGYKRTRHPRLASQQRSSENGN 512
           Y+ PE  ++ +   +A   RSS  G+
Sbjct: 494 YLPPELVQKKKR-SIADLNRSSNGGS 518


>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
          Length = 747

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 239/579 (41%), Positives = 342/579 (59%), Gaps = 21/579 (3%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P K YG+T  IS+A P E D    ++L + +   G++ES++E   R  VLG++    K+W
Sbjct: 17  PQKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFESEDELNHRLAVLGKLNSFVKEW 76

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + E++  +      V +    IFTFGSYRLGVH  GADIDALCV P +V R  DFF    
Sbjct: 77  IAEISESKNLPLSAVVNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFF 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L  ++E+ +L+ V DA VPV+KFKFDG+ IDLL+A ++   + ++LD+   S+L ++D
Sbjct: 136 EKLKRLDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 196 IRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNAV + LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MP
Sbjct: 256 RTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVSTST  +M ++F+ G T+ +E+   KA WS LFEP  FF+ Y++Y
Sbjct: 316 IITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHY 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +   A+  ++ L W G VES++R L   +ER+ Y  L  H  P  +  + +      F
Sbjct: 376 IVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENHNENEF 434

Query: 432 ----FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQ 483
               F+G+  K     + V     +DI+   +  ++ + N+ M  K GM I  +H+++KQ
Sbjct: 435 VSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQ 493

Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT---GSGLKRKKD-----PESVDQDGPE 535
           +  Y+ PE  +R +   L    RSS  G   +    GS L   +D     P S      +
Sbjct: 494 LHHYLPPELVQRKKK-SLGDINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFSSPTPVSK 552

Query: 536 KRQSISPQKQDSLS-PDHLAPSSVRSGTGSNVEPVIPDK 573
             Q  S  +  S+S P H   + + S   S V P  P++
Sbjct: 553 PSQPASTPEDSSISPPKHPVLAFMDSPPASEVSPPKPEQ 591


>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
          Length = 803

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/529 (41%), Positives = 315/529 (59%), Gaps = 43/529 (8%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT+PIS+A PT  D +++ ELE  L    L+E  EE   RE+VLG++  I K W  ++
Sbjct: 77  YGVTEPISLASPTSIDTKQSTELETTLRGFNLFEPPEESRLREEVLGKLDAIVKQWAIKV 136

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           + L+G+++QM  +  A IFT+GSYRLGVH  G+DID LCV P ++ R  DFF  L ++L 
Sbjct: 137 SVLKGFTEQMASEVIAKIFTYGSYRLGVHASGSDIDTLCVTPKHIMRA-DFFGTLADVLC 195

Query: 136 EMEEVTE---------------------------------LQPVLDAHVPVMKFKFDGLS 162
              E+TE                                 + PV DA VPV+K  F G+ 
Sbjct: 196 VHPEITEFTVSTFFSGSSGSSGGSSSGSSGLQRILIKKTMVMPVKDAFVPVIKMIFCGIP 255

Query: 163 IDLLYASISRLVVREDL-DISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL 221
           IDL++A +S   + EDL D+ D + L +VD+  + SLNGCRV DQIL+LVPNV  F   L
Sbjct: 256 IDLIFARLSIPAIPEDLNDLIDENYLKNVDDKCIVSLNGCRVTDQILRLVPNVTTFRMAL 315

Query: 222 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
           RC+K WA+RRGVYSNV G LGGV+WALL AR+CQLYPNA PS +++RFF++Y  W+WP+P
Sbjct: 316 RCIKLWAQRRGVYSNVLGLLGGVSWALLTARICQLYPNAAPSTIINRFFKIYDGWKWPSP 375

Query: 282 VMLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
           ++LC I D  +L   VW+    +RDK+H MPI+TPAYP MNS+YNVS STL ++  +F  
Sbjct: 376 ILLCQIQDGGQLAAKVWN---QKRDKSHLMPILTPAYPSMNSTYNVSRSTLSLLKSEFSR 432

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 400
           G  I ++++  + +W+ L E   FF  YR YLQ+D+ A   D    W+GW+ES+LR L  
Sbjct: 433 GAEITKKIDSGERKWTDLVEKGDFFTRYRFYLQIDVSAPEEDTHRKWEGWIESKLRILIS 492

Query: 401 MIERDTYGKLQCHPYPHEYVDTSKPC--AHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEE 457
            +E+    K    PY   + + +       C  FFMGLQ      +   +  D+ G+V  
Sbjct: 493 NLEQTPNMKFAI-PYAKSFANKASAVNGGICTCFFMGLQFNFSTAIGADKNVDLTGAVTS 551

Query: 458 FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 506
           F   I  +    P +E+ + +I++K +P +V  EG +     + A+++R
Sbjct: 552 FTNLIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEGPEHPPKQKTAAKKR 600


>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
          Length = 757

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/501 (43%), Positives = 306/501 (61%), Gaps = 29/501 (5%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS + PT AD++ + ELE  L    L+E+ EE  K+E++LG++  I + WV ++
Sbjct: 27  YGVTVPISFSNPTPADLKLSTELEDTLKSFNLFETPEESGKKEEILGKLNLIVRKWVIDV 86

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  RG+++QM  +  A IFTFGSYRLGV GP +DID LCV P ++ R  DFF  L   L 
Sbjct: 87  SLKRGFTEQMSLEVVAKIFTFGSYRLGVSGPSSDIDTLCVAPKHIMRS-DFFDFLGEALK 145

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDVDEPT 194
              ++TEL  V DA+VPV+   F G++IDL++A +S   + ED+ D+ D + L ++D+ +
Sbjct: 146 VHPDITELNMVKDAYVPVITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKNLDDQS 205

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           + SLNGCRV D+IL LVP+   F   LR +K WA+RRG+YSNV GFLGGV+WALL AR+C
Sbjct: 206 ITSLNGCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALLTARIC 265

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRW----PNPVMLCAI-DEAELGFSVWDPRKNRRDKTHH 309
           QLYPNA PS +++RFF++Y  WRW    P PV+LC I D       VW+    +RDK+H 
Sbjct: 266 QLYPNAAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWN---QKRDKSHL 322

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPI+TPAYP MNS+YNVS STL ++ D+F  GN I +++E  +A W+ L E   FF  Y+
Sbjct: 323 MPILTPAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEANWNKLLEKSDFFSRYQ 382

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---------- 419
            YLQ+D  A N ++   W+GW+ES+LR+L   +E+    K    P+P  +          
Sbjct: 383 FYLQIDCSAQNEEEHRKWEGWIESKLRKLISFLEQTPKMKFAI-PFPKSFENKPTPAATT 441

Query: 420 --------VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 471
                    D +      +FFMGL           +  DI  +V +F   I  +    P 
Sbjct: 442 TAANGEAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKDWAGKGPT 501

Query: 472 MEICVSHIRRKQIPPYVFPEG 492
           ME+ V +I+R+Q+P +V  E 
Sbjct: 502 MEMKVHYIKRRQLPAFVKAEA 522


>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
 gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
          Length = 744

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/508 (43%), Positives = 314/508 (61%), Gaps = 12/508 (2%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P K YG+T  IS+A P E D    ++L + +   G++E ++E   R  VLG++    K+W
Sbjct: 17  PRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEW 76

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + E++  +      V +    IFTFGSYRLGVH  GADIDALCV P +V R  DFF    
Sbjct: 77  ISEISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFF 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L   +E+ +L+ V DA VPV+KFKFDG+ IDLL+A ++   + ++LD+   S+L ++D
Sbjct: 136 EKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 196 IRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNAV + LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MP
Sbjct: 256 RTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVSTST  +M ++F+ G T+ +E+   KA WS LFEP  FF+ YR+Y
Sbjct: 316 IITPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHY 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +   A+  ++ L W G VES++R L   +ER+ Y  L  H  P  +  + +      F
Sbjct: 376 IVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDF 434

Query: 432 ----FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQ 483
               F+G+  K     + V     +DI+   +  ++ + N+ M  K GM I  +H+++KQ
Sbjct: 435 VSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQ 493

Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENG 511
           +  Y+ PE  +R +   L    RSS  G
Sbjct: 494 LHHYLPPELVQRKKK-SLGDINRSSNGG 520


>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
          Length = 616

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/486 (43%), Positives = 303/486 (62%), Gaps = 4/486 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P  +D+ R  EL++ L    ++ES+EE   R ++L ++  + K W++
Sbjct: 25  RTLGMTSAISVAEPKPSDLTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIR 84

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F    ++
Sbjct: 85  DTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFSSFFDL 143

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A ++   + + +D+ D  +L ++D+ 
Sbjct: 144 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQK 203

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 204 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 263

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LGF VWDPR N  D+ H MPII
Sbjct: 264 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPII 323

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G +I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 324 TPAYPQQNSTFNVSVSTRTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIV 383

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-F 431
           +   + +A+D L W G VES++R L   +ER+ +  L  H  P  +     +P  HC+ +
Sbjct: 384 LLARSLSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPEGHCSMW 442

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           F+GL     E +     +DI+  V+  +         K GM I   H++RK +  YV P 
Sbjct: 443 FIGLLFAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKDLHTYVSPS 502

Query: 492 GYKRTR 497
             +R R
Sbjct: 503 LLRRER 508


>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
 gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
          Length = 780

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/502 (42%), Positives = 311/502 (61%), Gaps = 24/502 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P   D+Q+  ELEK L    ++E + E   R ++L ++  + K WV+
Sbjct: 86  RTLGMTSAISLAEPKPEDIQKTTELEKALEPYNVFEEESELNHRMEILAKLNTLVKQWVR 145

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +   + + E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F     +
Sbjct: 146 DVSISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSFFEL 204

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  EVTE + V +A VPV+K  FDG+ IDLL+A ++   + ++ D+ D  +L ++D  
Sbjct: 205 LKKQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLKNLDPK 264

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV D+IL+LVPN+++F   LR +K WAK+ G+YSN  G+ GGV+WA+LVAR 
Sbjct: 265 SVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAMLVART 324

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + LV +FF V++ W+WP PV+L   D   LGF VWDPR N +D+ H MPII
Sbjct: 325 CQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPII 384

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS+ST +VM+++F  G  I +E+ L+KA W  LFE   FF  YR+++ 
Sbjct: 385 TPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFFFKYRHFIV 444

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-----HEY--------V 420
           + + + NADD L W G VES++R L L +ER+ +  L  H  P     HE          
Sbjct: 445 LLVTSNNADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTERQRES 503

Query: 421 DTSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEIC 475
           D S+    C+ +F+GL+ +  E +      D+  S++ F  S++ +       K GM+I 
Sbjct: 504 DGSRASTLCSLWFIGLEFERSENL----NVDLTESIQSFTDSVHKHAVHIKLLKDGMKIE 559

Query: 476 VSHIRRKQIPPYVFPEGYKRTR 497
             H+RRKQ+  Y+ P   KR R
Sbjct: 560 ARHVRRKQLSQYLDPNLLKRER 581


>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
          Length = 723

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/489 (43%), Positives = 305/489 (62%), Gaps = 9/489 (1%)

Query: 3   SSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           +S+  ++ P PK YG+T PIS+A P EAD+   R+L + L   G++E + E ++R  VLG
Sbjct: 6   TSQVQTAQPTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLG 65

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++  + K W++E++  +     +++     IFTFGSYRLGVH  GADIDALCV P +V R
Sbjct: 66  KLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER 125

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
             DFF   +  L E EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + E+LD+ 
Sbjct: 126 T-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLR 184

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  +L ++D   +RSLNGCRV D+IL LVPN+E+F  TLR +K WAKR  +YSN+ GFLG
Sbjct: 185 DDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLG 244

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           GV+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L   ++  L   VWDPR  
Sbjct: 245 GVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVT 304

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITPAYP  NS+YNVS ST  +M+++F+ G  I +E+  NKA WS LFE  
Sbjct: 305 PSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAP 364

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPH 417
            FF+ Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P 
Sbjct: 365 NFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPK 424

Query: 418 EYVDTSKPCAHCAFFMGLQRKPG-EVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEIC 475
           E  D  +        +  ++  G E +     FDI+   +  ++ +I   MF +  M+I 
Sbjct: 425 EGNDKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKIT 483

Query: 476 VSHIRRKQI 484
             H++RKQ+
Sbjct: 484 AMHVKRKQL 492


>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
          Length = 747

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/579 (40%), Positives = 340/579 (58%), Gaps = 21/579 (3%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P K YG+T  IS+A P E D    ++L + +   G++E ++E   R  VLG++    K+W
Sbjct: 17  PRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEW 76

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + E++  +      V +    IFTFGSYRLGVH  GADIDALCV P ++ R  DFF    
Sbjct: 77  IAEISDSKNLPPSSVTNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHIERT-DFFSSFF 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L   +E+ +L+ V DA VPV+KFKFDG+ IDLL+A ++   + ++LD+   S+L ++D
Sbjct: 136 EKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 196 IRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNAV + LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MP
Sbjct: 256 RTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVSTST  +M ++F+ G T+ +E+   KA WS LFEP  FF+ Y++Y
Sbjct: 316 IITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHY 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +   A+  ++ L W G VES++R L   +ER+ Y  L  H  P  +  + +      F
Sbjct: 376 IVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENHNENEF 434

Query: 432 ----FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQ 483
               F+G+  K     + V     +DI+   +  ++ + N+ M  K GM I  +H+++KQ
Sbjct: 435 VSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQ 493

Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT---GSGLKRKKD-----PESVDQDGPE 535
           +  Y+  E  +R +   L    RSS  G   +    GS L   +D     P S      +
Sbjct: 494 LHHYLPSELVQRKKK-SLGEINRSSNGGGSKRCSLDGSQLDSSRDTDIGTPFSSPTPVSK 552

Query: 536 KRQSISPQKQDSLS-PDHLAPSSVRSGTGSNVEPVIPDK 573
             Q +S  +  S++ P H     + S T S V P  P++
Sbjct: 553 PCQPVSTPEDSSITPPKHPVLVFIDSPTASEVSPPKPEQ 591


>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
          Length = 609

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/536 (41%), Positives = 319/536 (59%), Gaps = 16/536 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P   D+ R  EL++ L    ++ES+EE   R ++L ++  + K W++
Sbjct: 21  RTLGMTSAISVAEPKPLDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIR 80

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F     +
Sbjct: 81  DTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFNSFFEL 139

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A ++   + + +D+ D  +L ++D+ 
Sbjct: 140 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQK 199

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 200 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 259

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LG+ VWDPR N  D+ H MPII
Sbjct: 260 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPII 319

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G +I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 320 TPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFFSKYKHYIV 379

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-F 431
           +   ++ A+D L W G VES++R L   +ER+ +  L  H  P  +     +P  HC+ +
Sbjct: 380 LLARSSTAEDQLEWCGLVESKIRHLIGTLERNPHINL-AHVNPEAFPPLDPEPDKHCSMW 438

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           F+GL     E +     +DI+  VE  +         K GM I   H++RK +  YV P 
Sbjct: 439 FIGLLFAKSENLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYVSPS 498

Query: 492 GYKRTRHPRLASQQRSSENGNEYQTGS----------GLKRKKDPESVDQDGPEKR 537
             K+ R       +  S  GN   +GS          G KR  D + +D  G ++R
Sbjct: 499 LLKKERKVSGGVHRNGSIAGNG-NSGSVSPRNPGDTTGRKRLSD-QGIDACGKKRR 552


>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
          Length = 619

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/536 (40%), Positives = 318/536 (59%), Gaps = 12/536 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P  +D  R  EL++ L    ++ES+EE   R ++L ++  + K W++
Sbjct: 26  RTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIR 85

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F     +
Sbjct: 86  DTSVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFEL 144

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A ++   + + +D+ D  +L ++D+ 
Sbjct: 145 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQK 204

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 205 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 264

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LGF VWDPR N  D+ H MPII
Sbjct: 265 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPII 324

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G +I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 325 TPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIV 384

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-F 431
           +   +  A+D L W G VES++R L   +ER+ +  L  H  P  +     +P  HC+ +
Sbjct: 385 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMW 443

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           F+GL     E +     +DI+  V+            K GM I V H++++ +  YV P 
Sbjct: 444 FIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPS 503

Query: 492 GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDS 547
             KR R       +  +  GN     SG    ++P +        R+ +S Q QD+
Sbjct: 504 LLKRERKVSGTVHKNGNIAGN---GNSGSVSPRNPGNTTN-----RKRLSDQNQDT 551


>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
          Length = 619

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/536 (40%), Positives = 318/536 (59%), Gaps = 12/536 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P  +D  R  EL++ L    ++ES+EE   R ++L ++  + K W++
Sbjct: 26  RTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIR 85

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F     +
Sbjct: 86  DTSVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFEL 144

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A ++   + + +D+ D  +L ++D+ 
Sbjct: 145 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQK 204

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 205 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 264

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LGF VWDPR N  D+ H MPII
Sbjct: 265 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPII 324

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G +I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 325 TPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIV 384

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-F 431
           +   +  A+D L W G VES++R L   +ER+ +  L  H  P  +     +P  HC+ +
Sbjct: 385 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMW 443

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           F+GL     E +     +DI+  V+            K GM I V H++++ +  YV P 
Sbjct: 444 FIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPS 503

Query: 492 GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDS 547
             KR R       +  +  GN     SG    ++P +        R+ +S Q QD+
Sbjct: 504 LLKRERKVSGTVHKNGNIAGN---GNSGSVSPRNPGNTTN-----RKRLSDQNQDA 551


>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
          Length = 554

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/491 (43%), Positives = 305/491 (62%), Gaps = 30/491 (6%)

Query: 3   SSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           S   M+ PP P        + +  PT+ D+ R   LEKF ++A L  +++E+ KR  VL 
Sbjct: 34  SGPLMTVPPIPGH------VFLDSPTDIDIARTHALEKFQIDAELILTEKEEAKRRSVLA 87

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++ QI K W + +T  RG    + E +NA IFTFGSY+LGVHGP ADIDALCVGP Y + 
Sbjct: 88  QLEQIVKRWARRVTWQRGLPKDLKESSNAKIFTFGSYQLGVHGPEADIDALCVGPCYATL 147

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
           E+DFF +L+N+L +  EV+E+Q V  A+VP+M+FKF G+SIDLLYA +S   + ED+DI 
Sbjct: 148 EDDFFIVLYNMLKKTAEVSEVQCVKSANVPLMRFKFSGISIDLLYARLSLRTIPEDMDIL 207

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  +L ++D+ TV+SLNGCRV  +IL+LVP +E+F +TLRC+KFWAKRRG+YS++ GFLG
Sbjct: 208 DEKLLENLDDTTVKSLNGCRVTARILQLVPKIENFRSTLRCIKFWAKRRGIYSHIFGFLG 267

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           G++WA+LVARVCQ++PNA  SMLVSRFF +Y  W+WP PV L          S       
Sbjct: 268 GIHWAVLVARVCQMFPNATVSMLVSRFFWIYAHWQWPTPVTLVETQPDHADGS------- 320

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL------NKAQWS 356
             D+ HHMPII P +P    SYNV+ STL+ +  +F  G     ++E       N   W+
Sbjct: 321 --DRHHHMPIIIPVHPYSCCSYNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWN 378

Query: 357 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 416
            LFE + F  SY  ++Q+ + A++ DD  +W+GWVESR R L L  E+       C P P
Sbjct: 379 ILFERFPFCSSYEYFIQIYVTASDEDDFRSWRGWVESRFRHLLLKFEK---LPAYCDPNP 435

Query: 417 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
           + Y D +    HC F  GL+      +++    D+    +EF+L ++     +PG ++ +
Sbjct: 436 YPYFDKNVKEPHCYFLWGLK------LRKNISVDMADLEDEFRLYLSNGYEGRPGCDVHL 489

Query: 477 SHIRRKQIPPY 487
           + + R Q+P +
Sbjct: 490 TLLNRFQLPSF 500


>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
          Length = 603

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/486 (43%), Positives = 300/486 (61%), Gaps = 4/486 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P   D+ R  EL++ L    ++ES+EE   R ++L ++  + K W++
Sbjct: 25  RTLGMTSAISVAEPKPIDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIR 84

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F     +
Sbjct: 85  DTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFATFFEL 143

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A ++   + + +D+ D  +L ++D+ 
Sbjct: 144 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNLDQK 203

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 204 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 263

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LG+ VWDPR N  D+ H MPII
Sbjct: 264 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPII 323

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G  I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 324 TPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFFGKYKHYIV 383

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-F 431
           +   +++A+D L W G VES++R L   +ER+ +  L  H  P  +     +P  HC+ +
Sbjct: 384 LLARSSSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGKHCSMW 442

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           F+GL     E +     +DI+  VE  +         K GM I   H++RK +  YV   
Sbjct: 443 FIGLSFAKSESLNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHTYVSSS 502

Query: 492 GYKRTR 497
             KR R
Sbjct: 503 LVKRER 508


>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
 gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
          Length = 725

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/500 (42%), Positives = 312/500 (62%), Gaps = 21/500 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T  IS A P   D+Q+ +ELEK L    ++E++EE   R ++L ++  + K WV+
Sbjct: 20  KTLGMTSAISTAEPKPEDIQKTKELEKSLEPFNVFEAEEELNHRMEILAKLNTLVKQWVR 79

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +   + M E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F     +
Sbjct: 80  DVSISKNMPEAMAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSFFEL 138

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  EVTE + V +A VPV+K  FDG+ IDLL+A ++   + ++ D+ D  +L ++D+ 
Sbjct: 139 LKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQK 198

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV D+IL+LVPN+++F   LR +K WAKR G+YSN  G+ GGV+WA+LVAR 
Sbjct: 199 SVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVSWAMLVART 258

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + LV +FF V++ W+WP PV+L   D   LGF VWDPR N +D+ H MPII
Sbjct: 259 CQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPII 318

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS+ST +VM+ +F  G  I +++ + K  W  LFE   FF  YR+++ 
Sbjct: 319 TPAYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWEKLFEAPSFFYRYRHFIV 378

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS----- 423
           + + ++NADD L W G VES++R L   +ER+ +  L     +C+    +   T+     
Sbjct: 379 LLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNSATTLNGAD 438

Query: 424 -KPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVS 477
            KP   C+ +F+GL+ +  E +      D+  S++ F  S++ +       K GM+I   
Sbjct: 439 GKPTPFCSLWFIGLEFERSENL----NVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEAR 494

Query: 478 HIRRKQIPPYVFPEGYKRTR 497
           H+RRKQ+  Y+ P   KR R
Sbjct: 495 HVRRKQLTQYLDPNLLKRER 514


>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
          Length = 817

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/478 (43%), Positives = 297/478 (62%), Gaps = 6/478 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T  IS A P  +D+QR  ELE+ L + GL+ES+EE   R +VL +I Q+ K W+ 
Sbjct: 38  KTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKINQLVKKWIY 97

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     + E+    I+TFGSYRLGVH  GADID LCV P ++ R  DFF     +
Sbjct: 98  EVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS-DFFASFVEL 156

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ +D+L+A ++   + ED D+ D+++L ++D+ 
Sbjct: 157 LRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQK 216

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL LVPN E F   LR +K WAKR GVYSNV G+LGGV+WA+LVAR 
Sbjct: 217 CVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVART 276

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  + LV +FF V++ W WP PV+L   +E+ LGF VWDPR N  D+ H MPII
Sbjct: 277 CQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPII 336

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS STL +M  +F+ G  I +E+ L ++ W  LFEP  FF  Y++++ 
Sbjct: 337 TPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIV 396

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA---HCA 430
           +     + +  L W G VES++R L   +ER  Y  +  H  P  +   S+P        
Sbjct: 397 LMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESF-PPSEPEGDKLQSM 454

Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 488
           +F+GLQ    E V     +D R  V+  K        +K  ME+ + ++RR+++  Y+
Sbjct: 455 WFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 512


>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
          Length = 745

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/507 (41%), Positives = 316/507 (62%), Gaps = 13/507 (2%)

Query: 12  PPKQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P K Y G+T PIS+ GP   D++ + +LE+ +   G++ES+EE   R  VL +I  + ++
Sbjct: 12  PAKNYPGITSPISLEGPKPVDLKLSEKLEEAMRPHGVFESEEEMSHRMDVLHKINTLVRE 71

Query: 71  WVKELTRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI 129
           W+K+++R +  Y +  ++     + TFGSYRLGVH  GADID LCV P +V R  DFF  
Sbjct: 72  WIKDVSRQKNNYPEDKIDAFGGKVCTFGSYRLGVHTKGADIDTLCVAPRHVDR-SDFFSS 130

Query: 130 LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLND 189
              IL    EV +L+ V +A VPV+K  FDG+ +D+L+A ++   + E++D+ D S+L +
Sbjct: 131 FFEILKNTPEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALPQIPEEIDLRDESLLKN 190

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           ++E  VRSLNGCRV D+IL LVPN   F  TLR +K WAK++G+YSN  GFLGGV+WA+L
Sbjct: 191 LNEKCVRSLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGVSWAML 250

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVWDPRKNRRDK 306
           VARVCQLYPNA P+ L+ +FF +   W WP PV+L A+   ++  L F VWDPR N  D+
Sbjct: 251 VARVCQLYPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDR 310

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MPIITPAYP  NS++NV+ ST  +M ++ + G  I  ++   + +W ALFEP  FF+
Sbjct: 311 FHLMPIITPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEPSNFFQ 370

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKP 425
            Y++Y+ +   A    D L W G+VES++R L   +ER+   KL   HP P   ++ S  
Sbjct: 371 KYKHYIVLTASAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDG 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMF----WKPGMEICVSHIRR 481
              C +F+GL     ++  + Q  D+   ++ F  +++ + +     K GM++ + H++R
Sbjct: 431 EYLCRWFIGLTF--VKIENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKR 488

Query: 482 KQIPPYVFPEGYKRTRHPRLASQQRSS 508
           +Q+  YV P+   +++   +A + RSS
Sbjct: 489 RQLDLYVPPKILLQSKRAAVAQEHRSS 515


>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
          Length = 592

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/543 (39%), Positives = 320/543 (58%), Gaps = 22/543 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P   D+ R  EL++ L    ++ES+EE   R ++L ++  + K W++
Sbjct: 13  RTLGMTSAISVAEPKPMDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIR 72

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F    ++
Sbjct: 73  DTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRA-DYFTSFFDL 131

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A ++   + + +D+ D  +L ++D+ 
Sbjct: 132 LRMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQK 191

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 192 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 251

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LG+ VWDPR N  D+ H MPII
Sbjct: 252 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPII 311

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G  I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 312 TPAYPQQNSTFNVSISTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIV 371

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCA 430
           +   +  A+D L W G VES++R L  M+ER+   T   +    +P    ++ K C+   
Sbjct: 372 LLAKSLTAEDQLEWCGLVESKIRHLIGMLERNPHITLAHVNPEAFPPLNPESGKHCS--M 429

Query: 431 FFMGL---------QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 481
           +F+GL         + + GE +     +DI+  V+  +        +K GM I   H++R
Sbjct: 430 WFIGLSFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKR 489

Query: 482 KQIPPYVFPEGYKRTRHPRLASQQRSSENGN-------EYQTGSGLKRKKDPESVDQDGP 534
           K +  YV P   KR R       +  +  GN           G   K++   +++D  G 
Sbjct: 490 KDLNTYVSPSLLKRERKVSSGVHRNGNIAGNGNSGSVSPRNQGDTSKKRLSDQTLDACGK 549

Query: 535 EKR 537
           ++R
Sbjct: 550 KRR 552


>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
          Length = 748

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/519 (42%), Positives = 313/519 (60%), Gaps = 20/519 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L + +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 16  KHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 75

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           EL+  +     +V +    IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 76  ELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 134

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ + DA+VPV+KF+FDG+ IDL++A ++   V ++LD+ D S L  +D  
Sbjct: 135 LKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIR 194

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 254

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MPII
Sbjct: 255 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 314

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  +  E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 315 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNFFQKYRHYIV 374

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A+  ++ L W G VES++R L   +ER+ +  L     Q  P   E+   S   + 
Sbjct: 375 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVS- 433

Query: 429 CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             +F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+ 
Sbjct: 434 -MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 492

Query: 486 PYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 524
            Y+  E +++ +   L    RS+         SGL+ K+
Sbjct: 493 HYLPAEIFQKKKKQSLQDINRSA---------SGLQSKR 522


>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
          Length = 617

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/486 (43%), Positives = 298/486 (61%), Gaps = 4/486 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P  +D  R  EL++ L    ++ES+ E   R ++L ++  + K W++
Sbjct: 26  RTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIR 85

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F     +
Sbjct: 86  DTSIARNMPSSVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFFEL 144

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A +S   + + +D+ D  +L ++D+ 
Sbjct: 145 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQK 204

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 205 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 264

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LG+ VWDPR N  D+ H MPII
Sbjct: 265 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPII 324

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G +I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 325 TPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIV 384

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-F 431
           +   +  A+D L W G VES++R L   +ER+ +  L  H  P  +     +P  HC+ +
Sbjct: 385 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMW 443

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           F+GL     E +     +DI+  V+            K GM I   H++RK +  YV P 
Sbjct: 444 FIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPS 503

Query: 492 GYKRTR 497
             KR R
Sbjct: 504 LLKRER 509


>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
          Length = 610

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/550 (40%), Positives = 320/550 (58%), Gaps = 12/550 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P  +D  R  EL++ L    ++ES+ E   R ++L ++  + K W++
Sbjct: 22  RTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQWIR 81

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + +     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F     +
Sbjct: 82  DTSIARNMPSSVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFFEL 140

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A +S   + + +D+ D  +L ++D+ 
Sbjct: 141 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQK 200

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 201 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 260

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LG+ VWDPR N  D+ H MPII
Sbjct: 261 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPII 320

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G +I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 321 TPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIV 380

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS-KPCAHCA-F 431
           +   +  A+D L W G VES++R L   +ER+ +  L  H  P  +     +P  HC+ +
Sbjct: 381 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHCSMW 439

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
           F+GL     E +     +DI+  V+            K GM I   H++RK +  YV P 
Sbjct: 440 FIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPS 499

Query: 492 GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPD 551
             KR R       +  +  GN   TGS   R       +Q     R+ +S Q  D+    
Sbjct: 500 LLKRERKISGNVHKNGNIAGNG-NTGSVSPR-------NQGDLTNRKRLSDQSTDTYGKK 551

Query: 552 HLAPSSVRSG 561
             A  + ++G
Sbjct: 552 RRATDNEQAG 561


>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
 gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
 gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
          Length = 740

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/515 (42%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ E++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISEVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + E+LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVTRSS 516


>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
 gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
          Length = 671

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/483 (43%), Positives = 298/483 (61%), Gaps = 25/483 (5%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS + P+  D++ + +LE  L+   L+ES EE  KRE+VLG++ QI ++W K+++
Sbjct: 47  GVTEPISTSPPSALDLKLSNDLENTLISFNLFESPEESRKREEVLGKLNQIVREWAKQVS 106

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +GY +Q   +  A IFTFGSYRLGVHGP +DID LCVGP ++ R  DFF  L   L  
Sbjct: 107 IKKGYPEQTAAEVVAKIFTFGSYRLGVHGPNSDIDTLCVGPKHIMR-SDFFDDLSESLKT 165

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDVDEPTV 195
             E+TE   V DA VPV+   F G+ IDL+YA +S   + E+L D+ D   L +VDE ++
Sbjct: 166 HPEITEFTTVKDAFVPVINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDEKSI 225

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
            SLNGCRVADQILKLVPN+ +F   LRC+K WA           FLGG+ WALL AR+CQ
Sbjct: 226 LSLNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITWALLTARICQ 276

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHMPIIT 314
           LYPN+ PS +++RFF+VY  W+WP PV+L  + E   L   VW+    +RDK H MPI+T
Sbjct: 277 LYPNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNA---KRDKAHLMPILT 333

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP MNS+YNVS ST++++ ++F  G  I  ++E N++ ++AL E   FF  YR Y+Q+
Sbjct: 334 PAYPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFFTRYRFYIQI 393

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT----SKPCAHC- 429
           D  A N +D   W+GW+ES+LR L   +E     K    P+P  + +     S P   C 
Sbjct: 394 DCSAGNEEDHRKWEGWIESKLRFLISNLEMTPKMKYAV-PFPKSFSNLIHKESHPDQICT 452

Query: 430 AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME----ICVSHIRRKQIP 485
            FFMGL           +  D+  +V EF  +I  ++  +P  E    I V +I++KQ+P
Sbjct: 453 TFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQYIKKKQLP 512

Query: 486 PYV 488
            ++
Sbjct: 513 SFI 515


>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
          Length = 740

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/515 (42%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ E++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISEVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + E+LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVTRSS 516


>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
 gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
          Length = 559

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/500 (43%), Positives = 308/500 (61%), Gaps = 19/500 (3%)

Query: 22  ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGY 81
           IS A PT+ D+  +  + + L +   + S EE++KRE+VL ++  I K WVK++   +G 
Sbjct: 7   ISAALPTQKDLTNSEAIMEILKKENRFPSDEENKKREEVLAKLDGIIKGWVKQVCLKQGL 66

Query: 82  SDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVT 141
           S++ V  A + + TFGS+RLGVHGPGADID LC+ P+ V +    F  LH+IL    E+ 
Sbjct: 67  SEEFVSSAGSKLVTFGSFRLGVHGPGADIDTLCIVPNMVEKHH-CFTDLHDILKLRPEIA 125

Query: 142 ELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGC 201
           EL+PV DA+VP++   FDG+ IDLL+A +SR V+  DLDI D S L D D+ T RSLNG 
Sbjct: 126 ELKPVPDAYVPLITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADDETQRSLNGP 185

Query: 202 RVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV 261
           RVADQILKLVPN E+F TTLRC+K WA RR +Y N+ G+LGGV +A+L A++CQ+YPNA 
Sbjct: 186 RVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAKICQMYPNAA 245

Query: 262 PSMLVSRFFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 320
           PS L+++FF VY  W W   PV+L  I+E  L F VW+P+ N RDK H MPIITP+YPCM
Sbjct: 246 PSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYPCM 305

Query: 321 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 380
           NS++NVS +TL+ M ++F+ G +I ++ E     W  LFE   FF  Y NYLQV+I  +N
Sbjct: 306 NSTFNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATDFFVRYSNYLQVEINTSN 365

Query: 381 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL---QR 437
             D L W G+++S++R L   +E      L  H YP  + +         F++GL   Q 
Sbjct: 366 EVDHLKWIGFIQSKVRFLIPKLE--AVPGLTIHIYPDYFHNNQGGAFSSYFYIGLEYKQT 423

Query: 438 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC----VSHIRRKQIPPYVFPEGY 493
           KPG    EG   ++   + EF+      + W    E      +  I+R  IP +V  +  
Sbjct: 424 KPG----EGSVVNLASCIAEFE----ELLTWPDKNENMEKPKIQPIKRNAIPEFVISKKK 475

Query: 494 KRTRHPRLASQQRSSENGNE 513
           K+    +  +Q+R +E  +E
Sbjct: 476 KKELMKKNKAQKRKAEQDDE 495


>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
          Length = 736

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516


>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
          Length = 759

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/478 (43%), Positives = 297/478 (62%), Gaps = 6/478 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T  IS A P  +D+QR  ELE+ L + GL+ES+EE   R +VL +I Q+ K W+ 
Sbjct: 89  KTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKINQLVKKWIY 148

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     + E+    I+TFGSYRLGVH  GADID LCV P ++ R  DFF     +
Sbjct: 149 EVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS-DFFASFVEL 207

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ +D+L+A ++   + ED D+ D+++L ++D+ 
Sbjct: 208 LRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQK 267

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL LVPN E F   LR +K WAKR GVYSNV G+LGGV+WA+LVAR 
Sbjct: 268 CVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVART 327

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  + LV +FF V++ W WP PV+L   +E+ LGF VWDPR N  D+ H MPII
Sbjct: 328 CQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPII 387

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS STL +M  +F+ G  I +E+ L ++ W  LFEP  FF  Y++++ 
Sbjct: 388 TPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIV 447

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA---HCA 430
           +     + +  L W G VES++R L   +ER  Y  +  H  P  +   S+P        
Sbjct: 448 LMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESF-PPSEPEGDKLQSM 505

Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYV 488
           +F+GLQ    E V     +D R  V+  K        +K  ME+ + ++RR+++  Y+
Sbjct: 506 WFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 563


>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
 gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
 gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
 gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
           Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
           Full=Polynucleotide adenylyltransferase gamma; AltName:
           Full=SRP RNA 3'-adenylating enzyme
 gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
 gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
 gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
 gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
 gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
 gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
 gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
 gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
 gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
 gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
          Length = 736

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516


>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
          Length = 675

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 1   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 60

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 61  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 120

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 121 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 179

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 180 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 239

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 240 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 299

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 300 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 359

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 360 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 418

Query: 421 DTSKPCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +          +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 419 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 478

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 479 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 513


>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
          Length = 736

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516


>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
          Length = 739

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/502 (43%), Positives = 313/502 (62%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE- 432

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 433 -FRTMWVIGLVLKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVK 489

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 490 RKQLHQLLPSHVL---QKRNKH 508


>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
          Length = 741

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/515 (42%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ E++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISEVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVTRSS 516


>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
          Length = 743

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 516


>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
          Length = 736

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516


>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
          Length = 737

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/502 (42%), Positives = 303/502 (60%), Gaps = 9/502 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 14  KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 74  EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + E+LD+ D S L  +D  
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 192

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 372

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
           +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +    +      +  
Sbjct: 373 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 431

Query: 432 --FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
             F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+  
Sbjct: 432 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 491

Query: 487 YVFPEGYKRTRHPRLASQQRSS 508
           Y+  E  ++ +   L+   RSS
Sbjct: 492 YLPAEILQKKKKQSLSDVTRSS 513


>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
          Length = 752

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 42  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 101

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 102 WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 160

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 161 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 220

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 221 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 280

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 281 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 340

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 341 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 400

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 401 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 458

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 459 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 516

Query: 481 RKQI 484
           RKQ+
Sbjct: 517 RKQL 520


>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
          Length = 553

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/499 (42%), Positives = 309/499 (61%), Gaps = 21/499 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  IS+A P   D+ R  EL++ L    ++ES+EE   R ++L ++  + K W++
Sbjct: 23  RTLGMTSAISVAEPKPMDISRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIR 82

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  R     + E     I+TFGSYRLGVH  GADIDALCV P ++ R+ D+F    ++
Sbjct: 83  DTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRQ-DYFTSFFDL 141

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEVT+L+ V +A VPV+K  FDG+ ID+L+A ++   + + +D+ D  +L ++D+ 
Sbjct: 142 LKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQK 201

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+E+F   LR +K WAKR G+YSNV G+LGGV+WA+LVAR 
Sbjct: 202 CVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVART 261

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + L+ +FF V++ W+WP PV+L   D   LG+ VWDPR N  D+ H MPII
Sbjct: 262 CQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPII 321

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M + F+ G  I EE+ + KA W  LFEP  FF  Y++Y+ 
Sbjct: 322 TPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIV 381

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKPCAHCA 430
           +   + +A+D L W G VES++R L  M+ER+   T   +    +P    ++ K C+   
Sbjct: 382 LLAKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITLAHVNPEAFPPLNPESGKHCS--M 439

Query: 431 FFMGL---------QRKPGEVVQEGQQFDIRG---SVEEFKLSINMYMFWKPGMEICVSH 478
           +F+GL         + + GE +     +DI+    +VE     INM+   K GM I   H
Sbjct: 440 WFIGLAFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMF---KEGMWIEAKH 496

Query: 479 IRRKQIPPYVFPEGYKRTR 497
           ++RK +  YV P   K+ R
Sbjct: 497 VKRKDLHTYVSPSLLKKER 515


>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
          Length = 736

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 12  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 71

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 72  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 130

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 131 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 190

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 191 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 250

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 251 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 310

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 311 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 370

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 371 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 428

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 429 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 486

Query: 481 RKQI 484
           RKQ+
Sbjct: 487 RKQL 490


>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
          Length = 763

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/519 (42%), Positives = 312/519 (60%), Gaps = 20/519 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L + +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 31  KHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 90

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           EL+  +     +V +    IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 91  ELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 149

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ + DA+VPV+KF+FDG+ IDL++A ++   V ++LD+ D S L  +D  
Sbjct: 150 LKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIR 209

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 210 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 269

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MPII
Sbjct: 270 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 329

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  +  E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 330 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIV 389

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A+  ++ L W G VES++R L   +ER+ +  L     Q  P   E+   S   + 
Sbjct: 390 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVS- 448

Query: 429 CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             +F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+ 
Sbjct: 449 -MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 507

Query: 486 PYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKK 524
            Y+  E  ++ +   L    RS+         SGL+ K+
Sbjct: 508 HYLPAEILQKKKKQSLQDINRSA---------SGLQSKR 537


>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
 gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
          Length = 664

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/566 (39%), Positives = 321/566 (56%), Gaps = 47/566 (8%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ G+T  IS+A P   D+QR  EL K L    ++E++EE   R ++L ++  + K WVK
Sbjct: 26  KQLGITSAISLAEPRAEDLQRTEELSKSLEPYNVFETQEELNHRMEILAKLNTLVKQWVK 85

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F     I
Sbjct: 86  DISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERS-DYFQSFFEI 144

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L ++D  
Sbjct: 145 LKKQPEVTECRSVEEAFVPVIKMNFDGVEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPR 204

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV D+IL LVPN+E+F   LR +K WAKR G+YSN  G+ GGV WA+LVAR 
Sbjct: 205 SVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGVTWAMLVART 264

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  + LV +FF V++ W+WPNPV+L  +D   L F VWDPR N  D+ H MPII
Sbjct: 265 CQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPII 324

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST +V++ +F  G +I +E+ L +  W  LFE   FF  YR+++ 
Sbjct: 325 TPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVGWDRLFEAPSFFYRYRHFIV 384

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV------------- 420
           + + +  ADD L W G VES++R L   +ER  +  L  H  P  +              
Sbjct: 385 LLVNSQTADDHLEWCGLVESKVRLLIGNLERIPHIVL-AHVNPKCFELKKGAATANNSQN 443

Query: 421 ------DTSKPCAHCA---------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY 465
                 D  +  A  A         +F+GL+ +  E +      D+  S++ F   +NM+
Sbjct: 444 NSGNEDDLKQQSAQAAVTTAPYCSLWFIGLEFERSENL----NIDLTESIQNFTEHVNMH 499

Query: 466 ----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLK 521
                  K GM I   H++RKQ+  Y+  +  KR R        +S EN N +      K
Sbjct: 500 GVNIKMLKEGMSIVARHVKRKQLSVYLDADFLKRER--------KSMENHNNFNNSMMAK 551

Query: 522 RKKDPESVDQDGPEKRQSISPQKQDS 547
           RK+    + Q   E+    +P+ +DS
Sbjct: 552 RKRLSSELAQ-SQEQVPPTNPRGRDS 576


>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
          Length = 761

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 31  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 90

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 91  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 149

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 150 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 209

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 210 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 269

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 270 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 329

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 330 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFFQKYKH 389

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 390 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 447

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 448 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 505

Query: 481 RKQI 484
           RKQ+
Sbjct: 506 RKQL 509


>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
          Length = 739

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
          Length = 742

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/502 (44%), Positives = 313/502 (62%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 18  PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 77

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 78  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 136

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 137 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 196

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 197 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 256

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 257 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 316

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 317 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 376

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 377 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 434

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 435 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVK 492

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 493 RKQLHQLLPSHVL---QKRKKH 511


>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
 gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
          Length = 736

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/502 (43%), Positives = 313/502 (62%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 12  PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 71

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 72  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 130

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 131 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 190

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 191 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 250

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 251 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 310

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 311 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 370

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 371 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE- 429

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 430 -FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVK 486

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 487 RKQLHQLLPSHVL---QKRKKH 505


>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
 gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
          Length = 745

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
 gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
           Full=Polynucleotide adenylyltransferase
 gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
 gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
          Length = 739

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/502 (43%), Positives = 313/502 (62%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE- 432

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 433 -FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVK 489

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 490 RKQLHQLLPSHVL---QKRKKH 508


>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
 gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
 gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
 gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
           Full=Polynucleotide adenylyltransferase alpha
 gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
 gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
 gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
 gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
 gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
 gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
 gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
          Length = 745

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
          Length = 741

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 309/515 (60%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQHQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQNLSDVSRSS 516


>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
          Length = 755

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 31  PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 90

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 91  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 149

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 150 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 209

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 210 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 269

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 270 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 329

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 330 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 389

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 390 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 447

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 448 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 505

Query: 481 RKQI 484
           RKQ+
Sbjct: 506 RKQL 509


>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
          Length = 736

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 12  PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 71

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 72  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 130

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 131 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 190

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 191 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 250

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 251 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 310

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 311 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 370

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 371 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 428

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 429 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 486

Query: 481 RKQI 484
           RKQ+
Sbjct: 487 RKQL 490


>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
 gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
           Full=Polynucleotide adenylyltransferase alpha
 gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
 gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
          Length = 739

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
          Length = 736

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/510 (43%), Positives = 317/510 (62%), Gaps = 20/510 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E+D    ++L + L   G++E +EE ++R  +LG++  + K+W++
Sbjct: 15  KHYGITSPISLAAPKESDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 75  EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEK 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 134 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 314 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K    
Sbjct: 374 LLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYR 431

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
             + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RKQ
Sbjct: 432 TMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQ 489

Query: 484 ----IPPYVFPEGYKR-TRHPRLASQQRSS 508
               +P +V  +  K  T   RLA+   SS
Sbjct: 490 LHQLLPSHVLQKKKKHSTEGIRLATLNDSS 519


>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
          Length = 744

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
          Length = 724

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
 gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
          Length = 745

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
          Length = 741

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/515 (41%), Positives = 308/515 (59%), Gaps = 9/515 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  +  L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEEHQLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRSS 516


>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
          Length = 739

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
          Length = 832

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 108 PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 167

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 168 WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 226

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 227 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 286

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 287 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 346

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 347 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 406

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 407 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 466

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 467 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 524

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 525 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 582

Query: 481 RKQI 484
           RKQ+
Sbjct: 583 RKQL 586


>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
          Length = 739

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
          Length = 738

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/512 (43%), Positives = 316/512 (61%), Gaps = 19/512 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCILAQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVK 489

Query: 481 RKQ----IPPYVFPEGYKRTRHPRLASQQRSS 508
           R+Q    +P +V  +  K +   RL +   SS
Sbjct: 490 RRQLHQLLPNHVLQKKKKHSSEVRLTALNDSS 521


>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
          Length = 739

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
          Length = 739

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/514 (41%), Positives = 308/514 (59%), Gaps = 9/514 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRS 507
           I  +H+++KQ+  Y+  E  ++ +   L+   RS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRS 515


>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
          Length = 740

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 31  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 90

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 91  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 149

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 150 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 209

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 210 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 269

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 270 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 329

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 330 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 389

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 390 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 447

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 448 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 505

Query: 481 RKQI 484
           RKQ+
Sbjct: 506 RKQL 509


>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
          Length = 741

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/559 (40%), Positives = 323/559 (57%), Gaps = 17/559 (3%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D     +L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLACPKEIDHIYTEKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQSISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPADRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS---ENGNEYQTGSGLKRKKDPESVD 530
           I  +H+++KQ+  Y+  E  ++ +   L+   RSS   ++      GS L   +D    D
Sbjct: 482 IEATHVKKKQLHHYLPSETLQKKKKQSLSDVSRSSGGLQSKRPSLDGSCLDSSRD---TD 538

Query: 531 QDGP--EKRQSISPQKQDS 547
              P      S+ P K DS
Sbjct: 539 SGTPLTSPVSSVKPSKPDS 557


>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
 gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
          Length = 732

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/497 (43%), Positives = 311/497 (62%), Gaps = 19/497 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P + D    ++L + L   G++E +EE + R  +LG++  + K+W++
Sbjct: 15  KTYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNLVKEWIR 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++ L+     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 75  EISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEK 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L KA+WS LF+   FF+ Y++Y+ 
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYIL 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  +T K    
Sbjct: 374 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NTEKEEFR 431

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
             + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RKQ
Sbjct: 432 TMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ENEMKIAAMHVKRKQ 489

Query: 484 ----IPPYVFPEGYKRT 496
               +P +V P+  K +
Sbjct: 490 LHQLLPSHVLPKKKKHS 506


>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
          Length = 804

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 74  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 133

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 134 WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 192

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 193 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 252

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 253 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 312

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 313 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 372

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 373 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 432

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 433 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE- 491

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 492 -FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 548

Query: 481 RKQI 484
           RKQ+
Sbjct: 549 RKQL 552


>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
          Length = 740

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
 gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 739

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/502 (43%), Positives = 313/502 (62%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE- 432

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 433 -FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVK 489

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 490 RKQLHQLLPSHVL---QKRKKH 508


>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
          Length = 693

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
 gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
           tropicalis]
          Length = 752

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/505 (41%), Positives = 303/505 (60%), Gaps = 11/505 (2%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PPK YG+T PIS+AGP + D    ++L + +   G++E   E   R  VLG++  + K+W
Sbjct: 14  PPKHYGITSPISLAGPKDTDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEW 73

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + EL   +     ++      IFTFGSYRLGVH  GADID+LCV P +V R  DFF    
Sbjct: 74  IGELGEQKSLPPSIISAVGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQSFS 132

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L + + +  L+ V DA VPV+KF+F    IDL++A +    + ++LD+ D S L ++D
Sbjct: 133 EKLKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLD 192

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 193 IRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 252

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA+ S LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MP
Sbjct: 253 RTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMP 312

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVS ST  VM+++F+ G ++ +E+ L +  WS LFEP  FF  Y++Y
Sbjct: 313 IITPAYPQQNSTYNVSISTRSVMVEEFKQGLSVTDEILLGRCDWSKLFEPPNFFHKYKHY 372

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +   A+  +  L W G VES++R L   +ER+++  L  H  P  +      C    +
Sbjct: 373 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEY 431

Query: 432 ----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQ 483
               F+G+  K  E   E    D+   ++ F  ++    N     K GM I  +H++RKQ
Sbjct: 432 VSMWFLGIIFKKVENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMRIEATHVKRKQ 490

Query: 484 IPPYVFPEGYKRTRHPRLASQQRSS 508
           +  Y+  E  ++ +   +    RS+
Sbjct: 491 LHHYLHAEVLQKRKKQSVPDINRSA 515


>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
          Length = 745

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
          Length = 746

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/561 (41%), Positives = 334/561 (59%), Gaps = 24/561 (4%)

Query: 1   MSSSERMSS---PPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR 57
           M+  ER +S     P   YG+T PIS+A P++ D    ++L + +   G++E +EE   R
Sbjct: 1   MAGEERRTSRQQNQPQGHYGLTSPISLAPPSDKDHIHTQKLIEAMKPFGVFEDQEELYHR 60

Query: 58  EQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGP 117
             VLG++    ++W+ EL   +     + E     IFTFGSYRLGVH  G+DIDALCV P
Sbjct: 61  TTVLGKLNNFVREWILELAESKNLPPSITEQVGGKIFTFGSYRLGVHTKGSDIDALCVAP 120

Query: 118 SYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE 177
           S+V R  DFF      L   EEV  L+ + DA+VPV+KF+FDG+ IDL++A +S   V +
Sbjct: 121 SHVERS-DFFQSFFEKLKNQEEVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSD 179

Query: 178 DLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 237
           DLD+ D S L  +D   +RSLNG RV D+IL+LVPN+E+F  TLR +K WAKRRGVYSN+
Sbjct: 180 DLDLRDDSCLKSLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNI 239

Query: 238 TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVW 297
            GFLGGV+WA+LVAR+CQLYPNA+ S L+++FF +++ W WP PV+L  ++E+ L   VW
Sbjct: 240 MGFLGGVSWAMLVARICQLYPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVW 299

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
           DPR N  D+ H MPIITPAYP  NS+YNVS ST  VM+++FQ G  + +E+   K+ WS 
Sbjct: 300 DPRVNPSDRYHVMPIITPAYPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSK 359

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHP 414
           LFEP  FF+ Y++Y+ +   A   +  L W G V+S++R L   +ER+   T   +Q   
Sbjct: 360 LFEPLNFFQKYKHYIVLTASAFTEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQS 419

Query: 415 YPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKP 470
           +P   V   +      +F+GL  K  E   +    D+   ++ F  ++    +     K 
Sbjct: 420 FPGNEVLYKQNAYVSMWFLGLVFKKAESAVK-TNVDLTHGIQSFTDTVYRQASALNILKE 478

Query: 471 GMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL--KRKKDPES 528
           GM+I  ++++RKQ+  Y  P G  + R      +QR S+     Q  SGL  KR    ES
Sbjct: 479 GMKIEATYVKRKQL-HYFLPAGTLQKR-----KKQRVSDIS---QNNSGLQCKRSSLGES 529

Query: 529 VDQDGPEKRQSISPQKQDSLS 549
              DG + R S +P    SL+
Sbjct: 530 CS-DGSKDRDSRTPSNSSSLN 549


>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
          Length = 729

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/502 (43%), Positives = 313/502 (62%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 12  PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 71

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 72  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 130

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 131 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 190

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 191 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 250

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 251 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 310

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 311 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 370

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 371 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE- 429

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 430 -FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVK 486

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 487 RKQLHQLLPSHVL---QKRKKH 505


>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
          Length = 736

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/514 (41%), Positives = 309/514 (60%), Gaps = 9/514 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
            + +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GSKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRS 507
           I  +H+++KQ+  Y+  E  ++ +   L+   RS
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKKKQSLSDVSRS 515


>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
          Length = 739

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 222/512 (43%), Positives = 315/512 (61%), Gaps = 19/512 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+  P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLVAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVK 489

Query: 481 RKQ----IPPYVFPEGYKRTRHPRLASQQRSS 508
           R+Q    +P +V  +  K +   RL +   SS
Sbjct: 490 RRQLHQLLPNHVLQKKKKHSSEVRLTALNDSS 521


>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
          Length = 739

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/517 (42%), Positives = 310/517 (59%), Gaps = 14/517 (2%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PTNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 471
              +   H A      +F+G+   + +  E V     +DI+   +      N     K G
Sbjct: 422 GNKE--HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDG 479

Query: 472 MEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           M+I  +H+++KQ+  Y+ P    + +   L+   RSS
Sbjct: 480 MKIEATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 515


>gi|228152|prf||1717389A poly(A) polymerase
          Length = 689

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 305/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E+   +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREIRESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
          Length = 689

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 305/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E+   +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREIRESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
          Length = 738

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/502 (44%), Positives = 311/502 (61%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    + L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 28  PPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 87

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 88  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 146

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 147 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 206

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 207 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 266

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 267 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 326

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+K +WS LFE   FF+ Y++
Sbjct: 327 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKH 386

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 387 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KE 444

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 445 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 502

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 503 RKQLHELLPNHVL---QKRKKH 521


>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
          Length = 739

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/505 (42%), Positives = 311/505 (61%), Gaps = 11/505 (2%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    + YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQHQQRHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY- 419
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 420 --VDTSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGM 472
              + +K   + + +F+G+  +  E   EG   D+   ++ F  ++    N+    K GM
Sbjct: 422 GNKEHNKANNYVSMWFLGIIFRRVEHA-EGVNIDLTYDIQSFTDTVYRQANIINMLKDGM 480

Query: 473 EICVSHIRRKQIPPYVFPEGYKRTR 497
           +I  +H+++KQ+  Y+  E  ++ +
Sbjct: 481 KIEATHVKKKQLHHYLPAEILQKKK 505


>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
          Length = 844

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/484 (44%), Positives = 305/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 113 PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKE 172

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 173 WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 231

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 232 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 291

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 292 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 351

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 352 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 411

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+K +WS LFE   FF+ Y++
Sbjct: 412 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKH 471

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 472 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 529

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 530 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 587

Query: 481 RKQI 484
           RKQ+
Sbjct: 588 RKQL 591


>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
          Length = 746

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/484 (44%), Positives = 305/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 22  PPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 81

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 82  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 140

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 141 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 200

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 201 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 260

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 261 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 320

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+K +WS LFE   FF+ Y++
Sbjct: 321 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKH 380

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 381 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 438

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 439 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 496

Query: 481 RKQI 484
           RKQ+
Sbjct: 497 RKQL 500


>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
          Length = 725

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/502 (44%), Positives = 311/502 (61%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    + L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 28  PPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 87

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 88  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 146

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 147 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 206

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 207 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 266

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 267 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 326

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+K +WS LFE   FF+ Y++
Sbjct: 327 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKH 386

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 387 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KE 444

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 445 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 502

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 503 RKQLHELLPNHVL---QKRKKH 521


>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
 gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
          Length = 739

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/517 (42%), Positives = 310/517 (59%), Gaps = 14/517 (2%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + V  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGVRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 471
              +   H A      +F+G+   + +  E V     +DI+   +      N     K G
Sbjct: 422 GNKE--HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDG 479

Query: 472 MEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           M+I  +H+++KQ+  Y+ P    + +   L+   RSS
Sbjct: 480 MKIEATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 515


>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
          Length = 762

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/502 (42%), Positives = 303/502 (60%), Gaps = 9/502 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 38  KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 97

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 98  DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 156

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L  +D  
Sbjct: 157 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 216

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 217 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 276

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPII
Sbjct: 277 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 336

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 337 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 396

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH----C 429
           +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +    +         
Sbjct: 397 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 455

Query: 430 AFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
            +F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+  
Sbjct: 456 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 515

Query: 487 YVFPEGYKRTRHPRLASQQRSS 508
           Y+  E  ++ +   L+   RSS
Sbjct: 516 YLPAEILQKKKKQSLSDVSRSS 537


>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
 gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
           Full=Polynucleotide adenylyltransferase gamma; AltName:
           Full=SRP RNA 3'-adenylating enzyme
 gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
 gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
 gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
          Length = 739

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/517 (42%), Positives = 310/517 (59%), Gaps = 14/517 (2%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 471
              +   H A      +F+G+   + +  E V     +DI+   +      N     K G
Sbjct: 422 GNKE--HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDG 479

Query: 472 MEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           M+I  +H+++KQ+  Y+ P    + +   L+   RSS
Sbjct: 480 MKIEATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 515


>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
          Length = 741

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/502 (42%), Positives = 302/502 (60%), Gaps = 9/502 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 17  KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 77  DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L  +D  
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  +  E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIV 375

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
           +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +    +      +  
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 434

Query: 432 --FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
             F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+  
Sbjct: 435 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 494

Query: 487 YVFPEGYKRTRHPRLASQQRSS 508
           Y+  E  ++ +   L+   RSS
Sbjct: 495 YLPAEILQKKKKQSLSDVNRSS 516


>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
 gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
          Length = 904

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/519 (41%), Positives = 304/519 (58%), Gaps = 40/519 (7%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQ G+T  IS+A P  AD+QR   L   L    ++ES+EE   R ++L ++  + K W
Sbjct: 37  PAKQLGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLVKQW 96

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F    
Sbjct: 97  VKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQSFF 155

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L ++D
Sbjct: 156 EVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLD 215

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
             +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA+LVA
Sbjct: 216 HRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVA 275

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ H MP
Sbjct: 276 RTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMP 335

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS++NVS ST +VM+ +F  G  I +E+ L +A W  LFE   FF  YR++
Sbjct: 336 IITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHF 395

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QC-------------- 412
           + + + +  ADD L W G VES++R L   +ER+ +  L     +C              
Sbjct: 396 IVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQN 455

Query: 413 ---------HPYPHEYVDTSKP-CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 462
                     P P++   TS P C+   +F+GL+ +  E +      D+  S++ F   +
Sbjct: 456 NSGNEDDLKQPPPNQASVTSAPFCS--MWFIGLEFERSENL----NVDLTESIQNFTEHV 509

Query: 463 NMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
            M+       K GM I   H++RKQ+  Y+  +  KR R
Sbjct: 510 IMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRER 548


>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
          Length = 742

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/503 (42%), Positives = 304/503 (60%), Gaps = 11/503 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 17  KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 77  DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L  +D  
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  +  E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIV 375

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A+  ++ L W G VES++R L   +ER+ +  L     Q  P   E+   +   + 
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKDNNYVS- 434

Query: 429 CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
             +F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+ 
Sbjct: 435 -MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLH 493

Query: 486 PYVFPEGYKRTRHPRLASQQRSS 508
            Y+  E  ++ +   L+   RSS
Sbjct: 494 HYLPAEILQKKKKQSLSDVNRSS 516


>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
          Length = 739

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/488 (44%), Positives = 307/488 (62%), Gaps = 15/488 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q    P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFQAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQIPPYV 488
           RKQ+ P +
Sbjct: 490 RKQLHPLL 497


>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
 gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
          Length = 902

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 217/519 (41%), Positives = 304/519 (58%), Gaps = 40/519 (7%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQ G+T  IS+A P  AD+QR   L   L    ++ES+EE   R ++L ++  + K W
Sbjct: 36  PAKQLGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLVKQW 95

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F    
Sbjct: 96  VKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQSFF 154

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L ++D
Sbjct: 155 EVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLD 214

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
             +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA+LVA
Sbjct: 215 HRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVA 274

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ H MP
Sbjct: 275 RTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMP 334

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS++NVS ST +VM+ +F  G  I +E+ L +A W  LFE   FF  YR++
Sbjct: 335 IITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHF 394

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QC-------------- 412
           + + + +  ADD L W G VES++R L   +ER+ +  L     +C              
Sbjct: 395 IVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQN 454

Query: 413 ---------HPYPHEYVDTSKP-CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 462
                     P P++   TS P C+   +F+GL+ +  E +      D+  S++ F   +
Sbjct: 455 NSGNEDDLKQPPPNQASVTSAPFCS--MWFIGLEFERSENL----NVDLTESIQNFTEHV 508

Query: 463 NMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
            M+       K GM I   H++RKQ+  Y+  +  KR R
Sbjct: 509 IMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRER 547


>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
          Length = 752

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/481 (44%), Positives = 304/481 (63%), Gaps = 15/481 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+W++
Sbjct: 31  KHYGITSPISLAAPKEIDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 90

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 91  EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEK 149

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 150 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 209

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 210 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 269

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 270 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 329

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 330 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 389

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K    
Sbjct: 390 LLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYR 447

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
             + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RKQ
Sbjct: 448 TMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQ 505

Query: 484 I 484
           +
Sbjct: 506 L 506


>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
          Length = 707

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/502 (44%), Positives = 311/502 (61%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    + L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 28  PPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 87

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 88  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 146

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 147 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 206

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 207 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 266

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 267 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 326

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+K +WS LFE   FF+ Y++
Sbjct: 327 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKH 386

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 387 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KE 444

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 445 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 502

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 503 RKQLHELLPNHVL---QKRKKH 521


>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
          Length = 739

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/484 (44%), Positives = 305/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    + L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLATPKETDCVLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P +  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           R+Q+
Sbjct: 490 RRQL 493


>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
 gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
 gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
          Length = 642

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/483 (44%), Positives = 309/483 (63%), Gaps = 13/483 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PKQYG++ PIS+A P + D +  ++L + L   G++E +EE ++R  +L ++  + K+
Sbjct: 16  PAPKQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKE 75

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  R     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 76  WIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSF 134

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 135 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN++ F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ LNKA+WS LFE   FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E VD  K 
Sbjct: 375 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD--KE 432

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E++     +DI+   +  ++ +IN  MF +  M+I   H+RR
Sbjct: 433 EFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRR 491

Query: 482 KQI 484
           K++
Sbjct: 492 KEL 494


>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
           [Ornithorhynchus anatinus]
          Length = 740

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/483 (44%), Positives = 304/483 (62%), Gaps = 15/483 (3%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+W
Sbjct: 17  PQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEW 76

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           ++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +
Sbjct: 77  IREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFY 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D
Sbjct: 136 EKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLD 195

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVA
Sbjct: 196 IRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVA 255

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MP
Sbjct: 256 RTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMP 315

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++Y
Sbjct: 316 IITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHY 375

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPC 426
           + +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K  
Sbjct: 376 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEE 433

Query: 427 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRR 481
               + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++R
Sbjct: 434 FRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVKR 491

Query: 482 KQI 484
           KQ+
Sbjct: 492 KQL 494


>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
          Length = 750

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/505 (41%), Positives = 302/505 (59%), Gaps = 11/505 (2%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PPK YG+T  IS+AGP + D    ++L + +   G++E   E   R  VLG++  + K+W
Sbjct: 13  PPKHYGITSSISLAGPKDIDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEW 72

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + EL   +     ++  A   IFTFGSYRLGVH  GADID+LCV P +V R  DFF    
Sbjct: 73  IAELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFS 131

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L + + +  L+ V DA VPV+KF+F    IDL++A +    + ++LD+ D S L ++D
Sbjct: 132 EKLKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLD 191

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 192 IRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 251

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA+ S LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MP
Sbjct: 252 RTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMP 311

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVS ST  VM+++F+ G  + +E+ L +  WS LFEP  FF  Y++Y
Sbjct: 312 IITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHY 371

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +   A+  +  L W G VES++R L   +ER+ +  L  H  P  +      C    +
Sbjct: 372 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEY 430

Query: 432 ----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQ 483
               F+G+  K  E   E    D+   ++ F  ++    N     K GM+I  +H++RKQ
Sbjct: 431 VSMWFLGIIFKKVENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQ 489

Query: 484 IPPYVFPEGYKRTRHPRLASQQRSS 508
           +  Y+  E  ++ +   +    RS+
Sbjct: 490 LHHYLPAEVVQKRKKQSVPDINRSA 514


>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
 gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
          Length = 731

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/497 (43%), Positives = 310/497 (62%), Gaps = 19/497 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P + D    ++L + L   G++E ++E + R  +LG++  + K+W++
Sbjct: 15  KTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNLVKEWIR 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++ L+     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 75  EISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEK 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN++ F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L KA+WS LF+   FF+ Y++Y+ 
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYKHYIL 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  ++ K    
Sbjct: 374 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NSEKEEFR 431

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
             + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RKQ
Sbjct: 432 TMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEMKIAAMHVKRKQ 489

Query: 484 ----IPPYVFPEGYKRT 496
               +P +V P+  K +
Sbjct: 490 LHQLLPSHVLPKKKKHS 506


>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
          Length = 850

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/481 (44%), Positives = 304/481 (63%), Gaps = 15/481 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+W++
Sbjct: 128 KHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 187

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 188 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEK 246

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 247 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 306

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 307 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 366

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 367 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 426

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 427 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 486

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K    
Sbjct: 487 LLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYR 544

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
             + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RKQ
Sbjct: 545 TMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQ 602

Query: 484 I 484
           +
Sbjct: 603 L 603


>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
          Length = 709

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/502 (44%), Positives = 311/502 (61%), Gaps = 22/502 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    + L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 28  PPQKHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 87

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 88  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 146

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 147 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 206

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 207 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 266

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 267 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 326

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+K +WS LFE   FF+ Y++
Sbjct: 327 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKH 386

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 387 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD--KE 444

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 445 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 502

Query: 481 RKQ----IPPYVFPEGYKRTRH 498
           RKQ    +P +V     KR +H
Sbjct: 503 RKQLHELLPNHVL---QKRKKH 521


>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
          Length = 736

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/480 (43%), Positives = 304/480 (63%), Gaps = 9/480 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PPK YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+W
Sbjct: 13  PPKHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEW 72

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           ++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +
Sbjct: 73  IREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFY 131

Query: 132 NILAEMEEVTELQPV-LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           + L   EEV +L+    +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 132 DKLKLQEEVKDLRVCKWEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 191

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 192 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 251

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 252 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 311

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 312 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 371

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 372 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEF 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
                  +  ++   E +     +DI+   +  ++ +IN  MF +  M+I   H++RKQ+
Sbjct: 432 RTMWVIGLVFKKTENENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQL 490


>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
           boliviensis]
          Length = 736

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/504 (42%), Positives = 305/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
            + +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GSKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
          Length = 737

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/481 (44%), Positives = 304/481 (63%), Gaps = 15/481 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+W++
Sbjct: 17  KHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 76

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 77  EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEK 135

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 136 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 195

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 256 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 315

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 316 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 375

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K    
Sbjct: 376 LLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPD--KEEYR 433

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
             + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RKQ
Sbjct: 434 TMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQ 491

Query: 484 I 484
           +
Sbjct: 492 L 492


>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
          Length = 514

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLXFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
 gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
          Length = 751

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/505 (41%), Positives = 302/505 (59%), Gaps = 11/505 (2%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PPK YG+T  IS+AGP + D    ++L + +   G++E   E   R  VLG++  + K+W
Sbjct: 14  PPKHYGITSSISLAGPKDIDHIYTQKLTEAMGPFGVFEDDAELSHRMVVLGKLNNLVKEW 73

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + EL   +     ++  A   IFTFGSYRLGVH  GADID+LCV P +V R  DFF    
Sbjct: 74  IAELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFS 132

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L + + +  L+ V DA VPV+KF+F    IDL++A +    + ++LD+ D S L ++D
Sbjct: 133 EKLKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLD 192

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 193 IRCIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 252

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA+ S LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H MP
Sbjct: 253 RTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMP 312

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVS ST  VM+++F+ G  + +E+ L +  WS LFEP  FF  Y++Y
Sbjct: 313 IITPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHY 372

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +   A+  +  L W G VES++R L   +ER+ +  L  H  P  +      C    +
Sbjct: 373 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEY 431

Query: 432 ----FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQ 483
               F+G+  K  E   E    D+   ++ F  ++    N     K GM+I  +H++RKQ
Sbjct: 432 VSMWFLGIIFKKVENA-ESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQ 490

Query: 484 IPPYVFPEGYKRTRHPRLASQQRSS 508
           +  Y+  E  ++ +   +    RS+
Sbjct: 491 LHHYLPAEVVQKRKKQSVPDINRSA 515


>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
          Length = 709

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/492 (42%), Positives = 305/492 (61%), Gaps = 11/492 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 9   RHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 68

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 69  DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 127

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L  +D  
Sbjct: 128 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 187

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 188 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 247

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPII
Sbjct: 248 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 307

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 308 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 367

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCA 430
           +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +    + +K   + +
Sbjct: 368 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHNKANNYVS 426

Query: 431 -FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI----NMYMFWKPGMEICVSHIRRKQIP 485
            +F+G+  +  E   EG   D+   ++ F  ++    N+    K GM+I  +H+++KQ+ 
Sbjct: 427 MWFLGIIFRRVEHA-EGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLH 485

Query: 486 PYVFPEGYKRTR 497
            Y+  E  ++ +
Sbjct: 486 HYLPAEILQKKK 497


>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
          Length = 741

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/504 (42%), Positives = 304/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELTHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
          Length = 650

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/517 (42%), Positives = 310/517 (59%), Gaps = 14/517 (2%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 61  MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 120

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 121 LGKLNNLVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 180

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 181 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 239

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 240 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 299

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 300 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 359

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 360 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 419

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 420 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 478

Query: 421 DTSKPCAHCA------FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 471
              +   H A      +F+G+   + +  E V     +DI+   +      N     K G
Sbjct: 479 GNKE--HHKANNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDG 536

Query: 472 MEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           M+I  +H+++KQ+  Y+ P    + +   L+   RSS
Sbjct: 537 MKIEATHVKKKQLHHYL-PAEILQKKKKSLSDVSRSS 572


>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
          Length = 860

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/526 (41%), Positives = 312/526 (59%), Gaps = 16/526 (3%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P + YGVT PIS+A P + D    ++L + +   G++E +EE   R  VL ++  + K+W
Sbjct: 152 PHRHYGVTSPISLAPPKDIDYIHTQKLVEVMESFGVFEDEEELNHRLVVLCKLNNLVKEW 211

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + EL   +     +VE+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF    
Sbjct: 212 IFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFF 270

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L   EE+  L+ V DA+VPV+KF+FDG+ IDLL+A +    V ++LD+ D S L  +D
Sbjct: 271 EKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRSLD 330

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 331 IRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 390

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQL+PNA+ S LV++FF +++ W WPNPV+L   +E  L   VWDPR N  D+ H MP
Sbjct: 391 RTCQLHPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMP 450

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVSTST  V++++ ++G  +  E+   K+ W  LFE   FF+ Y++Y
Sbjct: 451 IITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNFFQKYKHY 510

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +       +  L W G VES++R L   +ER+ +  +  H  P  +    + C    +
Sbjct: 511 IVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRY 569

Query: 432 ----FMGLQRKPGEVVQEGQ---QFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
               F+G+  +  E  +  +    +DI+   +      N     K GM+I  ++++RK +
Sbjct: 570 VSMWFLGIIFRKLENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL 629

Query: 485 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 530
             Y  P G  + R      +++S  N ++  TG   KR    ES++
Sbjct: 630 -HYFLPAGTLQKR------KKQSILNISQNATGLRCKRASSNESLN 668


>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 598

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/553 (40%), Positives = 324/553 (58%), Gaps = 27/553 (4%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
            + + +S   PT  D + ++ L+  L E  +YE  +E  +RE+VLG I  + +DWV   +
Sbjct: 21  ALNRVMSNEMPTAFDEKLSKALDDKLREEDVYEDADECVRREEVLGEINALLQDWVLAAS 80

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI------- 129
             +G ++ M    N  ++TFGSYRLGVHGP ADID LC+GP ++SREEDFF         
Sbjct: 81  ERKGITEDMRPSCN--LYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGWDENDYEG 138

Query: 130 -LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI-SRLVVREDLDISDMSVL 187
             ++++ +      + PV DA VP +K  F G  ID+ Y S+ S   V EDLD+   SV+
Sbjct: 139 SFYDVMRKHPGTESIVPVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLDVCQTSVM 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D+P V+SLNGCRVADQ+L++VPN + F   LR L+ WA+RRGVYSNV GF GGVN A
Sbjct: 199 MNLDDPGVKSLNGCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGVNLA 258

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDK 306
           +LVARVCQLYPNA PSMLV  FF++++ W+W  PVML  I DE   G  VWD R N+ ++
Sbjct: 259 ILVARVCQLYPNAAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAER 318

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
              M I+TPAYP  NS++NVS STL V+  +F+ G  + + + LN A+W  L+    F E
Sbjct: 319 YQLMKILTPAYPAQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLWCSLNFLE 378

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK-P 425
            Y++YL V I A N DD   W+GWV SR++ L   IE  T G++  HP    Y D  K  
Sbjct: 379 KYKHYLMVTISAKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDE 438

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEICVSH 478
            +H   F+GL     +  +E    ++  +VE+F++++  +M        W PGM+  V +
Sbjct: 439 NSHVTLFLGLFPSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKY 498

Query: 479 IRRKQIPPYVFPE--GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEK 536
           ++RK +P +V  E  GY +  +     ++ +S    E +     + K  P   D     K
Sbjct: 499 LKRKDLPSFVKEEIDGYVKDIYAPEKEKKAASAEDEEKKIS---EEKPLPLGDDTKAARK 555

Query: 537 RQSISPQKQDSLS 549
           R+ +  Q+ DS++
Sbjct: 556 RKEM--QEDDSIT 566


>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
          Length = 739

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/504 (42%), Positives = 304/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
          Length = 736

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/504 (42%), Positives = 304/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQCQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +          +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
          Length = 736

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/504 (42%), Positives = 304/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQCQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +          +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
           3'- Datp And Magnesium Chloride
          Length = 514

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/484 (44%), Positives = 306/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRXIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
          Length = 736

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/504 (42%), Positives = 303/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQCQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  +  E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +          +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
          Length = 716

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/662 (36%), Positives = 352/662 (53%), Gaps = 47/662 (7%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P + YG+T PIS+A P + D    ++L + +   G++E +EE   R  VL ++  + K+W
Sbjct: 14  PQRHYGITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEW 73

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + EL   +     +VE+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF    
Sbjct: 74  IFELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFF 132

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L   EE+  L+ V DA+VPV+KF+FDG+ IDL++A +    V ++LD+ D S L  +D
Sbjct: 133 EKLKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLD 192

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 193 IRCIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 252

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQL+PNA+ S LV +FF +++ W WPNPV+L   +E  L   VWDPR N  D+ H MP
Sbjct: 253 RTCQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMP 312

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+YNVSTST  V++++ ++G  +  E+   ++ W  LFE   FF+ Y++Y
Sbjct: 313 IITPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHY 372

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +       +  L W G VES++R L   +ER+ +  +  H  P  +    + C    +
Sbjct: 373 IVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRY 431

Query: 432 ----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
               F+G+   + +  E  +    +DI+   +      N     K GM+I  ++++RK +
Sbjct: 432 VSMWFLGIIFRKLESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL 491

Query: 485 PPYVFPEGY--KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISP 542
             Y  P G   KR +   L          N  Q  SGL+ K+   +   +      S +P
Sbjct: 492 -HYFLPAGTLQKRKKQSML----------NISQNASGLRCKRASSNESLNSSRDNHSRTP 540

Query: 543 QKQDSLSP----DHLAPSSVRSGTGSNVE----------------PVIPDKRVLNQEIAE 582
               SLS     D       R+   +N E                PVI  K      I  
Sbjct: 541 YNSSSLSMISKLDTSTAEMERTNGANNREKMTHVPVSPVSKGISIPVIGSKMEAAVAIRT 600

Query: 583 GGDVSNSSVITSV----TSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDAD 638
            G  S+ ++ T +     S++ +C   G+  ++G+   N+ S      P S  S  C   
Sbjct: 601 SGAPSDCTIPTVIGRNAISQLTTCFVQGHHELSGTQITNSKSA-APKRPHSPASKECSKR 659

Query: 639 SQ 640
           S+
Sbjct: 660 SK 661


>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
           [Anolis carolinensis]
          Length = 771

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/481 (44%), Positives = 304/481 (63%), Gaps = 15/481 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+W++
Sbjct: 49  KHYGITSPISLAAPKENDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 108

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++ ++     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 109 EISEIKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEK 167

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 168 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 227

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 228 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 287

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 288 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 347

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 348 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 407

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K    
Sbjct: 408 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KEEFR 465

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
             + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++R+Q
Sbjct: 466 TMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHVKRRQ 523

Query: 484 I 484
           +
Sbjct: 524 L 524


>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
          Length = 629

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 229/562 (40%), Positives = 317/562 (56%), Gaps = 41/562 (7%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           M+S    +Q+GVT+PIS +  T+A+ +    +   L   G +ES+EE   RE VLGR+  
Sbjct: 1   MTSTNGQQQWGVTQPISSSESTDAEKKVTVAMMDELRRQGTFESEEEARTRELVLGRVAT 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           + K +V ++   RG S+     A   IFTFGSYRLGVHGPG+DID LCV P +VSRE DF
Sbjct: 61  LVKKFVHKVALSRGLSESAAAAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DF 119

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F +   +L E+E V+E+  V +A+VP++K K  G+ ID L A ++   + +DL + D ++
Sbjct: 120 FEVFEPMLREVEGVSEVSGVPEAYVPIIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNL 179

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L ++DE  +RSLNG RV D+IL+LVPNV  F   LRC+K WA+RR +YSNV GFLGGV W
Sbjct: 180 LKNLDERCIRSLNGSRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAW 239

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVAR+CQLYPNAV   +VSRFF +   W WP PV+L  I+E  L   VW+PR    D+
Sbjct: 240 AMLVARICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDR 299

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
           +H MPIITPAYP M +++NV+ ST  +M ++F+ G  I +++     QWSALF  + FF 
Sbjct: 300 SHRMPIITPAYPAMCATHNVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDFFH 359

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
            YR YLQ+     N D  + W G VESR+RQL + +E      L  HP+   + D +  C
Sbjct: 360 KYRYYLQIIASTGNPDLQIKWAGTVESRIRQLVMKLEYVDALTL-AHPFIKGF-DQTLHC 417

Query: 427 AH------CA-----------------------------FFMGLQRKPGEVVQEG-QQFD 450
            +      CA                             FF+GL  +P +    G ++ D
Sbjct: 418 LNDEEVRLCASGEVPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRRLD 477

Query: 451 IRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE 509
           I     EF   + M+  + +  M I V HI+   +P YVF EG K     R  S  R   
Sbjct: 478 ISYPTTEFTKLVKMWDKYDESSMGIVVRHIKNSSLPDYVFEEGAKPNLK-RAKSTNRGQG 536

Query: 510 NGNEYQTGSGLKRKKDPESVDQ 531
             N        K++K  E  D+
Sbjct: 537 KSNNTTPDQPNKKQKKYEVFDK 558


>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
          Length = 637

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/482 (45%), Positives = 307/482 (63%), Gaps = 11/482 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PK+YGV+ PIS+A P E D    R L + L   G++E +EE ++R  VL ++  + K+
Sbjct: 16  PLPKRYGVSSPISLAVPKETDCLLTRRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKE 75

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     + E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   
Sbjct: 76  WIREMSESKSLPQSVTENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFASF 134

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 135 YAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A+     L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 375 YIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEF 434

Query: 426 CAHCAFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRK 482
                  +GL +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK
Sbjct: 435 RTMWVIGLGL-KKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRK 492

Query: 483 QI 484
           ++
Sbjct: 493 EL 494


>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
 gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
 gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
 gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
 gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
          Length = 642

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/483 (44%), Positives = 308/483 (63%), Gaps = 13/483 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PKQ+G++ PIS+A P + D +  ++L + L   G++E +EE ++R  +L ++  + K+
Sbjct: 16  PAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKE 75

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  R     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 76  WIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSF 134

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 135 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN++ F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ LNKA+WS LFE   FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 375 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD--KE 432

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E++     +DI+   +  ++ +IN  MF +  M+I   H+RR
Sbjct: 433 EFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRR 491

Query: 482 KQI 484
           K++
Sbjct: 492 KEL 494


>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
           Full=Polynucleotide adenylyltransferase beta; AltName:
           Full=Testis-specific poly(A) polymerase
          Length = 641

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/483 (44%), Positives = 308/483 (63%), Gaps = 13/483 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PKQ+G++ PIS+A P + D +  ++L + L   G++E +EE ++R  +L ++  + K+
Sbjct: 15  PAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  R     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN++ F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ LNKA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD--KE 431

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E++     +DI+   +  ++ +IN  MF +  M+I   H+RR
Sbjct: 432 EFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRR 490

Query: 482 KQI 484
           K++
Sbjct: 491 KEL 493


>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
 gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
          Length = 733

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/491 (42%), Positives = 298/491 (60%), Gaps = 9/491 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 14  KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 74  DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L  +D  
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 372

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
           +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +    +      +  
Sbjct: 373 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 431

Query: 432 --FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
             F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+  
Sbjct: 432 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 491

Query: 487 YVFPEGYKRTR 497
           Y+  E  ++ +
Sbjct: 492 YLPAEILQKKK 502


>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
 gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
          Length = 506

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 213/504 (42%), Positives = 307/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY- 419
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 420 --VDTSKPCAHCA-FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +  K   + + +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
          Length = 642

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/483 (44%), Positives = 308/483 (63%), Gaps = 13/483 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PKQYG++ PIS+A P + D +  ++L + L   G++E +EE ++R  +L ++  + K+
Sbjct: 16  PAPKQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKE 75

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  R     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 76  WIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSF 134

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 135 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN++ F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ LNKA+WS LFE   FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E VD  K 
Sbjct: 375 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVD--KE 432

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E +     +DI+   +  ++ +IN  MF +  M+I   H++R
Sbjct: 433 EFRTMWVIGLVLKKPENSESLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLKR 491

Query: 482 KQI 484
           K++
Sbjct: 492 KEL 494


>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
          Length = 736

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/491 (42%), Positives = 298/491 (60%), Gaps = 9/491 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 14  KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 74  DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L  +D  
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR 
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  FF+ YR+Y+ 
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 372

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
           +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +    +      +  
Sbjct: 373 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 431

Query: 432 --FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
             F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++KQ+  
Sbjct: 432 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 491

Query: 487 YVFPEGYKRTR 497
           Y+  E  ++ +
Sbjct: 492 YLPAEILQKKK 502


>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
           familiaris]
          Length = 738

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/504 (41%), Positives = 304/504 (60%), Gaps = 9/504 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV ++IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 421 DTSKPCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +      +    F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 482 IEATHVKKKQLHHYLPAEILQKKK 505


>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
          Length = 630

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/487 (42%), Positives = 299/487 (61%), Gaps = 6/487 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  G+T  ISMA P   D+Q+  EL + LV  G+ E+ EE   R +VL ++ ++AK+W+K
Sbjct: 23  RNLGMTSAISMAMPKPLDLQKTIELSEALVPHGVSETDEELNHRMEVLRKVNELAKEWIK 82

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +       +     I+TFGSYRLGVH  GADIDALCV P +V R  D+F    ++
Sbjct: 83  EVSVQKNMPTSAADHVGGKIYTFGSYRLGVHNKGADIDALCVAPRHVDRV-DYFTSFVDL 141

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  EVTEL+ V +A VPV+K  FDG+ +D+L+A ++   + +++D+ D  +L ++D  
Sbjct: 142 LKKQPEVTELRAVEEAFVPVIKMNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNLDPK 201

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVPN+++F   LR +K WAK+ G+YSNV G+LGGV+WA+LVAR 
Sbjct: 202 CVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLVART 261

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  + LV +FF V++ W WP PV+L   D   L + VWDPR N  D+ H MPII
Sbjct: 262 CQLYPNAAAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPII 321

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  VM ++F+ G  + EE+   KA W  LFEP  FF  Y++++ 
Sbjct: 322 TPAYPQQNSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFFVKYKHFIV 381

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP---CAHCA 430
           +   +++ +D L W G VES++R L L +ER+ +  L  H  P +Y D  +P        
Sbjct: 382 LIASSSSVEDQLEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQPEPDTISTM 439

Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFP 490
           +F+GL  K  E +      DI+    +     +     K G  I   H++RKQ+  Y+  
Sbjct: 440 WFIGLVFKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLSSYLPS 499

Query: 491 EGYKRTR 497
               RT+
Sbjct: 500 TFLLRTK 506


>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
          Length = 501

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/495 (42%), Positives = 303/495 (61%), Gaps = 9/495 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY- 419
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 420 --VDTSKPCAHCA-FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +  K   + + +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYV 488
           I  +H+++KQ+  Y+
Sbjct: 482 IEATHVKKKQLHHYL 496


>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
 gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
          Length = 637

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/478 (44%), Positives = 306/478 (64%), Gaps = 9/478 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YGV  PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++
Sbjct: 19  KRYGVFSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   +  
Sbjct: 79  EISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAK 137

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR 
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIV 377

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A+     L W G VES++R L   +E++ +  L     Q  P P E  D  + C  
Sbjct: 378 LLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFCTM 437

Query: 429 CAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
               +GL++ +  E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 438 WVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 494


>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
          Length = 508

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/495 (42%), Positives = 303/495 (61%), Gaps = 9/495 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY- 419
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 420 --VDTSKPCAHCA-FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +  K   + + +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHIRRKQIPPYV 488
           I  +H+++KQ+  Y+
Sbjct: 482 IEATHVKKKQLHHYL 496


>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
          Length = 626

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 331/593 (55%), Gaps = 61/593 (10%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS +   + + +    L + L   G +E++EE + RE VLGR+  + K +V+ ++
Sbjct: 9   GVTPPISTSESNDREKEVTTTLMEELRRQGTFETEEEAKTREIVLGRLAAVVKKFVRRVS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
              G S+     A   IFTFGSYRLGVHGPG+DID LCV P +V+RE DFF +L  +L E
Sbjct: 69  LANGMSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFFDVLEEMLKE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            E VTE+  V +A+VP++K K +G+ IDL  A ++   + +DL + D ++L ++DE  VR
Sbjct: 128 TEGVTEVSGVPEAYVPIIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLLRNLDERCVR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RV D+IL+LVPNV  F  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 188 SLNGSRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA+   +VSRFF +   W WP PV+L  I+E  L   VW+P+    D+ H MPIITPA
Sbjct: 248 YPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NV+ ST  +M ++F+ G+ I ++V +  A+WS LF  + FF  +R YLQV  
Sbjct: 308 YPSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFFHKHRYYLQVIA 367

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC------- 429
              N+D  + W G VESR+RQL + +E      ++     H ++   +  +HC       
Sbjct: 368 STGNSDLQIKWSGTVESRIRQLVMKLEY-----VESLILAHPFIKGFEQVSHCISSEEVR 422

Query: 430 -------------------------------AFFMGLQRKPGEVVQEG-QQFDIRGSVEE 457
                                           F++GL  +P      G ++ DI     E
Sbjct: 423 AVAQGEVSEAVSKRRKEDIEGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKLDISYPTTE 482

Query: 458 FKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT 516
           F   + M+  + +  M I V HI+   +P YV+ EG    R PR A ++  S  G++   
Sbjct: 483 FTKLVKMWEKYDEAKMGIIVRHIKSTALPDYVYDEG---ERQPRSAQKRVKSGKGSDKSN 539

Query: 517 GSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAP---SSVRSGTGSNV 566
           G+         S D    ++R S S  +  S  P  + P   ++V S TG+ V
Sbjct: 540 GT---------SPDMPNKKRRASNSLSESTSTMPLPMQPFKKAAVSSPTGAIV 583


>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
 gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
          Length = 661

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/562 (38%), Positives = 330/562 (58%), Gaps = 36/562 (6%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T  IS+A P   D  +  EL+K L    ++E + E   R ++L ++  + K WV+
Sbjct: 30  KTLGMTSAISLAEPKPEDHTKTVELQKALEPYNVFEDESELNHRMEILSKLNTLVKQWVR 89

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +   + + E     I+TFGSYRLGVH  GADIDALCV P  + R+ D+F     +
Sbjct: 90  DVSISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERQ-DYFGSFFEL 148

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  EVTE + V +A VPV+K  FDG+ IDLL+A ++   + ++ D+ D  +L ++D  
Sbjct: 149 LKKQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDPK 208

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNGCRV D+IL+LVPN+++F   LR +K WAK+ G+YSN  G+ GGV+WA+LVAR 
Sbjct: 209 SVRSLNGCRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVART 268

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + LV +FF V++ W+WP PV+L   D   LGF VWDPR N +D+ H MPII
Sbjct: 269 CQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPII 328

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS+ST +VM+++F  G  I +E+ L KA W  LFE   FF  YR+++ 
Sbjct: 329 TPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRHFIV 388

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----------DT 422
           + + + NADD L W G VES++R L   +ER+ +  L  H  P  +            + 
Sbjct: 389 LLVTSNNADDHLEWCGLVESKIRYLIQNLERNLHINL-AHVNPKCFEQQEQNQKDDGGEG 447

Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSH 478
            K      +F+GL+ +  E +      D+  S++ F  +++ +       K GM+I   H
Sbjct: 448 GKTTLCSLWFIGLEFERSENL----NVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEARH 503

Query: 479 IRRKQIPPYVFPEGYKRTRH--------PRLASQQRSSENGNEYQTGSGLKRKKDPESVD 530
           +RRKQ+  Y+ P   KR R           L +   ++   N   +G+ L++++  E++ 
Sbjct: 504 VRRKQLNQYLDPNLLKRERKNSDSGLGSTALNTSGGAAAGNNTSGSGTTLRKRQSSEAL- 562

Query: 531 QDGPEKRQSISPQKQDSLSPDH 552
                 + +++ +K  + S DH
Sbjct: 563 ------QAAVASKKGRNDSFDH 578


>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
          Length = 641

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/483 (44%), Positives = 307/483 (63%), Gaps = 13/483 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PKQ+G++ PIS+A P + D +  ++L + L   G++E +EE ++R  +L ++  + K+
Sbjct: 15  PAPKQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  R     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RS NGCRV D+IL LVPN++ F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSFNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ LNKA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETAD--KE 431

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E++     +DI+   +  ++ +IN  MF +  M+I   H+RR
Sbjct: 432 EFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRR 490

Query: 482 KQI 484
           K++
Sbjct: 491 KEL 493


>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
          Length = 652

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/544 (41%), Positives = 309/544 (56%), Gaps = 45/544 (8%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PK  GVT PI++A  T  + +    L + L   G +ES+ E + RE VLGR+  + K +V
Sbjct: 14  PKYLGVTPPIAVAESTPREKEVTVTLLEELRRQGTFESEAEAKTREIVLGRLAALVKKFV 73

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            +++  RG S+     A   IFTFGSYRLGVHGPG+DID LCV P +VSRE DFF +  +
Sbjct: 74  HQVSLSRGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFDVFED 132

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L E E V E+  V DA+VP++K K  G+ IDL+ A ++   + +DL + D ++L ++DE
Sbjct: 133 MLKETEGVIEVSGVPDAYVPIIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRNLDE 192

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRSLNG RV D+IL+LVPNV  F   LRC+K WA+RR +YSNV GFLGGV WA+LVAR
Sbjct: 193 RCVRSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 252

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +CQLYPNA+   +VSRFF +   W WP PVML  I++  L   VW+P+    D+ H MPI
Sbjct: 253 ICQLYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPI 312

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP M +++NV+ ST  +M ++F+  + I + + + KA WS LF  + FF  YR YL
Sbjct: 313 ITPAYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDFFHKYRYYL 372

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------- 417
           QV       D  + W G VESR+RQL + +E      L  HP+                 
Sbjct: 373 QVIASTGGPDVQIKWSGTVESRIRQLVMKLEYVESLAL-AHPFIKGFEQVSYCLTDEEVR 431

Query: 418 -------------------EYVDTSKPCAHCAFFMGL---QRKPGEVVQEGQQFDIRGSV 455
                              E V+         F++GL    R+PG V    ++ DI    
Sbjct: 432 AVAQGEISEAIAKRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSV--GPRRLDISYPT 489

Query: 456 EEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEY 514
            EF   + M+  F +  M I V HIR   +P YVF EG    R PRLA ++ +++  + +
Sbjct: 490 TEFTKLVKMWEKFDENKMGIVVRHIRSAILPDYVFDEG---ERQPRLAQKRPNTKTTDRF 546

Query: 515 QTGS 518
              S
Sbjct: 547 NNTS 550


>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
 gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
          Length = 820

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/576 (39%), Positives = 323/576 (56%), Gaps = 50/576 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  +L   L    ++ES++E   R ++L ++  +
Sbjct: 20  SGGPPAKQLGMTSAISLAEPRPEDLQRTDDLRGSLEPYNVFESQDELNHRMEILAKLNTL 79

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 80  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 138

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 139 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA
Sbjct: 199 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWA 258

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ 
Sbjct: 259 MLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRY 318

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  
Sbjct: 319 HLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYR 378

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD----- 421
           YR+++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+       
Sbjct: 379 YRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSAN 438

Query: 422 ----------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                                 TS P     +F+GL+ +  E +      D+  S++ F 
Sbjct: 439 NSQNNSGNEDDLKQSQGSQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFT 493

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 494 EHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFN 545

Query: 516 TGSGLKRKK----DPESVDQDGPEKRQSISPQKQDS 547
           T     RK+      +S D   P ++QS   + +DS
Sbjct: 546 TTLLANRKRLSTELAQSQDPLPPGQQQSSGNRGRDS 581


>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
 gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
          Length = 818

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/576 (39%), Positives = 322/576 (55%), Gaps = 50/576 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  +
Sbjct: 22  SGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPFNVFESQDELNHRMEILAKLNTL 81

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 82  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 140

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 141 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 200

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA
Sbjct: 201 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWA 260

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ 
Sbjct: 261 MLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRY 320

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  
Sbjct: 321 HLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRISWERLFEAPSFFYR 380

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD----- 421
           YR+++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+       
Sbjct: 381 YRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFRKGQSAN 440

Query: 422 ----------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                                 TS P     +F+GL+ +  E +      D+  S++ F 
Sbjct: 441 NSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFT 495

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 496 EHVTMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFN 547

Query: 516 TGSGLKRKK----DPESVDQDGPEKRQSISPQKQDS 547
                 RK+      +S D   P ++QS   + +DS
Sbjct: 548 NTLLANRKRLSTELAQSQDPLPPGQQQSSGNRGRDS 583


>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
           leucogenys]
          Length = 735

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/519 (41%), Positives = 308/519 (59%), Gaps = 13/519 (2%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  +  E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL---------- 410
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L          
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPG 422

Query: 411 -QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK 469
            + H   + YV    P  + +     +      +   Q +    +   ++ + N+ M  K
Sbjct: 423 NKEHHKDNNYVSMWFPWDNFSESRKXENAESVNIXXXQSYIQSFTDTVYRQANNINML-K 481

Query: 470 PGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
            GM+I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 482 EGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 520


>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
 gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
          Length = 835

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/578 (38%), Positives = 321/578 (55%), Gaps = 49/578 (8%)

Query: 10  PPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAK 69
           PP  KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  + K
Sbjct: 23  PPATKQLGMTSAISLAEPRPEDLQRTEELRGSLEPYNVFESQDELNHRMEILAKLNTLVK 82

Query: 70  DWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI 129
            WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F  
Sbjct: 83  QWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQS 141

Query: 130 LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLND 189
              +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L +
Sbjct: 142 FFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRN 201

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA+L
Sbjct: 202 LDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAML 261

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ H 
Sbjct: 262 VARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHL 321

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  YR
Sbjct: 322 MPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSFFYRYR 381

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD------- 421
           +++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+         
Sbjct: 382 HFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANSS 441

Query: 422 --------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLS 461
                               TS P     +F+GL+ +  E +      D+  S++ F   
Sbjct: 442 QNNSGNEDDLKQSQGSQSSVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFTEH 496

Query: 462 INMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTG 517
           + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N +   
Sbjct: 497 VMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRER--------KSMESHNNFNNT 548

Query: 518 SGLKRKKDPESVDQDG---PEKRQSISPQKQDSLSPDH 552
               RK+    + Q     P  +QS   + +DS +  H
Sbjct: 549 LLANRKRLSTELAQSQDSLPSGQQSSGNRGRDSGAKIH 586


>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
          Length = 639

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/485 (44%), Positives = 310/485 (63%), Gaps = 13/485 (2%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           +PPPP+ YG++ PIS+A P E D    ++L + L   G++E +EE ++R  +L ++  + 
Sbjct: 14  TPPPPEHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLV 73

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF 
Sbjct: 74  KEWIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFT 132

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 133 SFYDKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 192

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 312

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 423
           ++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKE 432

Query: 424 KPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 479
           +      + +GL  +KP   EV+     +DI+   +  ++ +IN  MF +  M+I   H+
Sbjct: 433 E--FRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHL 489

Query: 480 RRKQI 484
           +RK++
Sbjct: 490 KRKEL 494


>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
          Length = 548

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/484 (44%), Positives = 305/484 (63%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  F G+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFGGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++
Sbjct: 432 EFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
 gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
          Length = 815

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/549 (39%), Positives = 310/549 (56%), Gaps = 46/549 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  +
Sbjct: 20  SGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTL 79

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 80  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 138

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 139 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA
Sbjct: 199 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWA 258

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ 
Sbjct: 259 MLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRY 318

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  
Sbjct: 319 HLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYR 378

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD----- 421
           YR+++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+       
Sbjct: 379 YRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSAN 438

Query: 422 ----------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                                 TS P     +F+GL+ +  E +      D+  S++ F 
Sbjct: 439 NSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFT 493

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 494 EHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFN 545

Query: 516 TGSGLKRKK 524
                 RK+
Sbjct: 546 NTLLANRKR 554


>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
 gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
          Length = 814

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/549 (39%), Positives = 311/549 (56%), Gaps = 46/549 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  +
Sbjct: 20  SGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTL 79

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 80  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 138

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 139 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA
Sbjct: 199 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWA 258

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ 
Sbjct: 259 MLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRY 318

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  
Sbjct: 319 HLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYR 378

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP------ 416
           YR+++ + + +  ADD L W G VES++R L   +ER+ +  L     +C  +       
Sbjct: 379 YRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSAN 438

Query: 417 -----------------HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                            ++   TS P     +F+GL+ +  E +      D+  S++ F 
Sbjct: 439 NSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFT 493

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 494 EHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFN 545

Query: 516 TGSGLKRKK 524
                 RK+
Sbjct: 546 NTLLANRKR 554


>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
          Length = 561

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 217/509 (42%), Positives = 308/509 (60%), Gaps = 47/509 (9%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+P+S A PT A+++  R LE+ L    LY S+EE  +R  VLG +  +  +WV+ + 
Sbjct: 11  GVTEPVSTATPTAAELRLTRTLEECLHANNLYPSREEQRQRLNVLGALNAVVVEWVRRVA 70

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF--------- 127
             +  S+ +VE+  A IFTFGSYRLGV+GPGAD+D LCV P +V R   FF         
Sbjct: 71  LAQRLSEDVVEEHGARIFTFGSYRLGVNGPGADVDTLCVVPRFVERNRYFFGLPDEQGSR 130

Query: 128 ----FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISD 183
                +L ++L + +   EL  V  A+VPV+K +F G+ +DLL A I+ + + ++ +I D
Sbjct: 131 APTQVVLADMLRQDDRTEELVTVESAYVPVIKIRFMGVDMDLLCAPIALMKIPKNFNILD 190

Query: 184 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 243
            +VL +VD+ T RSLNG RV D IL+LVP+V+ F TTLRC+KFWAKRRG+YSNV G+LGG
Sbjct: 191 DAVLRNVDDATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGG 250

Query: 244 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG----FSVWDP 299
           V WA+LVARVCQLYPNA  ++++S FFR+Y+ W+WP PV LC I   +        VWDP
Sbjct: 251 VAWAMLVARVCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP 310

Query: 300 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV---------EL 350
             + RD+ H MPIITPAYP MNS+YNV+ STLR+MM++F  G  IC +V          +
Sbjct: 311 -TDPRDRRHLMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGV 369

Query: 351 NKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 410
           +   W  L EP  FF  Y++YLQ++I A N DDL  W+G VESRLR L   +E      +
Sbjct: 370 SPRDWERLLEPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPV 427

Query: 411 QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQE----GQQFDIRGSVEEFKLSIN--- 463
             HP+P    +  +      F+ GL+ +  ++ +E      + D+   VE +  + +   
Sbjct: 428 SVHPWP----EADERGTSVFFYFGLRLETDKIAREEGTKRARIDLNSPVESWLSTPDPRD 483

Query: 464 ----MYMFW---KPGMEICVSHIRRKQIP 485
                 + W    P M + V+ ++R Q+P
Sbjct: 484 TRSVPVLHWPERTPDMLVHVTPLKRAQLP 512


>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
 gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
          Length = 827

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/549 (39%), Positives = 311/549 (56%), Gaps = 46/549 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  +
Sbjct: 20  SGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTL 79

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 80  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 138

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 139 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA
Sbjct: 199 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWA 258

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ 
Sbjct: 259 MLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRY 318

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  
Sbjct: 319 HLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYR 378

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP------ 416
           YR+++ + + +  ADD L W G VES++R L   +ER+ +  L     +C  +       
Sbjct: 379 YRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSAN 438

Query: 417 -----------------HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                            ++   TS P     +F+GL+ +  E +      D+  S++ F 
Sbjct: 439 NSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFT 493

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 494 EHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFN 545

Query: 516 TGSGLKRKK 524
                 RK+
Sbjct: 546 NTLLANRKR 554


>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
          Length = 642

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/485 (44%), Positives = 310/485 (63%), Gaps = 13/485 (2%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           +PPPPK YG++ PIS+A P E D    ++L + L   G++E +EE ++R  +L ++  + 
Sbjct: 14  TPPPPKHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLV 73

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF 
Sbjct: 74  KEWIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFT 132

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 133 SFYDKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 192

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 252

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR +  D+ H
Sbjct: 253 LVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYH 312

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y
Sbjct: 313 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 372

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 423
           ++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  
Sbjct: 373 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPD-- 430

Query: 424 KPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 479
           K      + +GL  +KP   EV+     +DI+   +  ++ +IN  MF +  M+I   H+
Sbjct: 431 KEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHL 489

Query: 480 RRKQI 484
           +RK++
Sbjct: 490 KRKEL 494


>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
 gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
          Length = 493

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/490 (43%), Positives = 304/490 (62%), Gaps = 14/490 (2%)

Query: 13  PKQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P++Y G+T PIS++ PT+ D+  N +L   L    +++++E    R  VLG++ ++ K+W
Sbjct: 3   PRKYPGITSPISLSEPTKFDIDLNVKLVNTLKPYNVFDTEEGLTHRMVVLGKLNKLVKEW 62

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           +K+++  +     + E     I+TFGSYRLGVHG GADID LCV P +V R  DFF   +
Sbjct: 63  IKQVSLAKNMPPAIAETVGGKIYTFGSYRLGVHGAGADIDTLCVAPRHVDRS-DFFSSFY 121

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            IL + +E T+++ V +A VPV+K  FDG+ +D+L+A ++   V ED D+ +  +L ++D
Sbjct: 122 EILKDQKETTDIRGVEEAFVPVIKLDFDGVELDILFARLALPQVPEDQDLREEVLLKNLD 181

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           +  VRSLNGCRV D++L LVPN E+F   LR +K WAKRRGVYSNV GFLGGV+WA+LVA
Sbjct: 182 QRCVRSLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLVA 241

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHM 310
           R CQLYPNA+ S L+ +FF V++ W WP PV+L  IDE   LGF VWDPR N  D+ H M
Sbjct: 242 RTCQLYPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLM 301

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  +M ++F+ G  + +E+   KA W  LFEP  FF  Y++
Sbjct: 302 PIITPAYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSFFGKYKH 361

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTSKPCAH 428
           Y+ +   A + +  L W G VES++R L   +ER  Y  L  H  P +Y  ++  +    
Sbjct: 362 YIVLSTSATSKEHHLEWVGLVESKVRILIGNLERTAYIAL-AHVNPKQYPPLNPQEDVFV 420

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMF----WKPGMEICVSHIRRKQI 484
             +F+GLQ        EG   D+   ++ F  +++         K GM+I    +RRKQ+
Sbjct: 421 TNWFIGLQFNK----IEGGNIDLTFEIQSFTDTVHRQAISNGTLKEGMKIEARSVRRKQL 476

Query: 485 PPYVFPEGYK 494
             Y+ P   K
Sbjct: 477 GEYLPPSLLK 486


>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
          Length = 659

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/549 (39%), Positives = 310/549 (56%), Gaps = 46/549 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  +
Sbjct: 20  SGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTL 79

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 80  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 138

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 139 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA
Sbjct: 199 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWA 258

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ 
Sbjct: 259 MLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRY 318

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  
Sbjct: 319 HLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYR 378

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD----- 421
           YR+++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+       
Sbjct: 379 YRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIALAHVNPKCFEFKKGQSAN 438

Query: 422 ----------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                                 TS P     +F+GL+ +  E +      D+  S++ F 
Sbjct: 439 NSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFT 493

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 494 EHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFN 545

Query: 516 TGSGLKRKK 524
                 RK+
Sbjct: 546 NTLLANRKR 554


>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
 gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
          Length = 857

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 245/672 (36%), Positives = 358/672 (53%), Gaps = 82/672 (12%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQ G+T  IS+A P   D+QR  EL K L    ++ES++E   R ++L ++  + K W
Sbjct: 22  PAKQLGMTSAISLAEPRAEDLQRTGELGKSLEPYNVFESQDELNHRMEILAKLNTLVKQW 81

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           +KE++  +   +   +     I+TFGSYRLGVH  GADIDALCV P  + R  D+F    
Sbjct: 82  IKEISVSKNMPEAAADRLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFF 140

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L ++D
Sbjct: 141 EVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLD 200

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
             +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA+LVA
Sbjct: 201 PRSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVA 260

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ H MP
Sbjct: 261 RTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMP 320

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS++NVS ST +V++ +F  G +I +E+ L +  W  LFE   FF  YR++
Sbjct: 321 IITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSFFYRYRHF 380

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS--- 423
           + + + +  ADD L W G VES++R L   +ER+ +  L     +C       V  +   
Sbjct: 381 IVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFELKKGAVTANNSQ 440

Query: 424 ----------------------KPCA------HCA-FFMGLQRKPGEVVQEGQQFDIRGS 454
                                 KP         C+ +F+GL+ +  E +      D+  S
Sbjct: 441 NNSGNEDDLKQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFERSENL----NIDLTES 496

Query: 455 VEEFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSEN 510
           ++ F   + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+
Sbjct: 497 IQNFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRER--------KSMES 548

Query: 511 GNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSG-TGSNVEPV 569
            N + T     RK+    +  +  + +  + P +Q S      A SS R   +G+ V   
Sbjct: 549 HNNFNTTMLANRKR----LSTELAQSQDPLPPGQQQS------AASSNRGRESGAKVHR- 597

Query: 570 IPDKRVLNQEIAEGGDVSN-SSVITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPV 628
                 L++ + E  D SN SS +  V     +   +   S    + GNNG+ E S    
Sbjct: 598 ------LSESLNE--DNSNASSDMGGVMPTTPTASQMNAPSFKAKAGGNNGTTESS---- 645

Query: 629 SSQSDCCDADSQ 640
              S C D +S+
Sbjct: 646 ---SSCLDNNSE 654


>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 656

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/495 (42%), Positives = 296/495 (59%), Gaps = 30/495 (6%)

Query: 31  DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDAN 90
           D++ + ELE  L    ++ES EE  +RE+VLG I +  ++WVK  +  +G  + +    N
Sbjct: 2   DVKLSAELEARLHLENVFESPEECARREEVLGEINEALQEWVKAASAAKGIEEDLEPRCN 61

Query: 91  ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF----------FILHNILAEMEEV 140
             ++TFGSYRLGVHGP ADID LC+GP ++SR EDFF          F L   +      
Sbjct: 62  --LYTFGSYRLGVHGPAADIDTLCIGPRHLSRSEDFFGSEWTEYEGSFYL--AMKNHPGT 117

Query: 141 TELQPVLDAHVPVMKFKFDGLSIDLLYASI-SRLVVREDLDISDMSVLNDVDEPTVRSLN 199
             +  V DA VP +K  F G  +D+ Y S+ S + V EDLD+   S+L ++D+ +V+SLN
Sbjct: 118 DRIVAVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVKSLN 177

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRVADQ+L+LVPN   F   LR L+ WA+ RGVYSNV GF GGVN A+LVARVCQLYPN
Sbjct: 178 GCRVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQLYPN 237

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A  SMLV  FF+++  W+W  PVML AI +   G  VWD R N+ ++   M IITPAYP 
Sbjct: 238 AAASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPA 297

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
            NS++NV+ STL V+  +F+ G   C ++ + + +W +L+EP  FF  +++YLQV + A 
Sbjct: 298 QNSTFNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPFFTMHKHYLQVTMCAI 357

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA-HCAFFMGLQRK 438
             DD   W+GWV SRLR L   +E  + G L  HPYP    D +K  A HC +++GL   
Sbjct: 358 TEDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGPA 417

Query: 439 PGEVVQEGQQ---FDIRGSVEEFKLSINMYMF-------WKPGMEICVSHIRRKQIPPYV 488
           P             ++  +VE+F++ +  ++        W+PGME+ V H++RK +P + 
Sbjct: 418 PPPTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVPAWA 477

Query: 489 FP----EGYKRTRHP 499
            P    EG +  R P
Sbjct: 478 IPDSGKEGKEEARTP 492


>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
           boliviensis]
          Length = 634

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/485 (44%), Positives = 308/485 (63%), Gaps = 13/485 (2%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           +P P K+YG++ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + 
Sbjct: 11  TPQPAKRYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLV 70

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALC+ P +V R  DFF 
Sbjct: 71  KEWIREISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFT 129

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 130 SFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 189

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAM 249

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVAR CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H
Sbjct: 250 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYH 309

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y
Sbjct: 310 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKY 369

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTS 423
           ++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  
Sbjct: 370 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD-- 427

Query: 424 KPCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHI 479
           K      + +GL  +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+
Sbjct: 428 KEEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-ETGMKIAAMHL 486

Query: 480 RRKQI 484
           RRK++
Sbjct: 487 RRKEL 491


>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
 gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
 gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
 gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
 gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
 gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
 gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
 gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
 gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
 gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
 gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
 gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
          Length = 659

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/549 (39%), Positives = 310/549 (56%), Gaps = 46/549 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  +
Sbjct: 20  SGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTL 79

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 80  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 138

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 139 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA
Sbjct: 199 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWA 258

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ 
Sbjct: 259 MLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRY 318

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  
Sbjct: 319 HLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYR 378

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD----- 421
           YR+++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+       
Sbjct: 379 YRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSAN 438

Query: 422 ----------------------TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                                 TS P     +F+GL+ +  E +      D+  S++ F 
Sbjct: 439 NSQNNSGNEDDLKQSQGNQSAVTSAPFC-SMWFIGLEFERSENL----NVDLTESIQNFT 493

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 494 EHVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFN 545

Query: 516 TGSGLKRKK 524
                 RK+
Sbjct: 546 NTLLANRKR 554


>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
           garnettii]
          Length = 637

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/506 (42%), Positives = 316/506 (62%), Gaps = 17/506 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG++ PIS+A P + D    ++L + L   G++E +EE ++R  +L ++  + K+
Sbjct: 16  PPQKHYGISSPISLAAPKDTDCTLTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKE 75

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 76  WIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 134

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 135 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  +  K 
Sbjct: 375 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE--NPEKE 432

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E++     +DI+   +  ++ +IN  MF +  M+I   H++R
Sbjct: 433 EFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINTKMF-EMDMKIAAMHLKR 491

Query: 482 KQ----IPPYVFPEGYKRTRHPRLAS 503
           K+    +P +V  +   +T   RL +
Sbjct: 492 KELHQLLPDHVLQKKKTQTEGVRLTA 517


>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
           [Ostreococcus tauri]
 gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
           [Ostreococcus tauri]
          Length = 606

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/601 (38%), Positives = 339/601 (56%), Gaps = 41/601 (6%)

Query: 22  ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGY 81
           IS A PT+ D+  +  L++ L    +YE  EE  +RE+VLG +  + ++W +  +  +G 
Sbjct: 20  ISNAPPTDRDLALSAALDEKLHTEDVYEDPEECTRREEVLGELNALLQEWTRTASAAKGI 79

Query: 82  SDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI--------LHNI 133
           ++ M    N  ++TFGSYRLGVHGP ADID LC+GP ++SREEDFF           +++
Sbjct: 80  TEDMRPSCN--LYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGFEENDYEGSFYDV 137

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI-SRLVVREDLDISDMSVLNDVDE 192
           + +     E+ PV DA VP +K  F G  ID+ Y S+ S   V EDLD+   SVL ++D+
Sbjct: 138 MRKHPGTEEIVPVRDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNLDD 197

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
           P V+SLNGCRVADQ+L+ VPN + F   LR L+ WA+RRG+YSNV GF GGVN A+LVAR
Sbjct: 198 PGVKSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILVAR 257

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVWDPRKNRRDKTHHMP 311
           VCQLYPNA  SMLV  FF++++ W+W  PVML  I DE   G  VWD R N+ ++   M 
Sbjct: 258 VCQLYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMK 317

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           I+TPAYP  NS++NVS STL V+  +F+ G  + + + LNK +W  L+    F   Y++Y
Sbjct: 318 ILTPAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTSFLTMYKHY 377

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK-PCAHCA 430
           L V I A  A+D   W+GWV SR++ L   IE  T G++  HP    Y D  K    H  
Sbjct: 378 LMVSISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTHVI 437

Query: 431 FFMGLQRKPGEV-VQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEICVSHIRRK 482
            F+GL   P  +  +E    ++  +VE+F++ +  +M        W PGM+  V H++RK
Sbjct: 438 LFLGLF--PSSLKKKEKVAMNLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMVRHVKRK 495

Query: 483 QIPPYVFPE--GYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSI 540
            +P +V  E  GY +  +           + +E    +  K++KD  S D++     +  
Sbjct: 496 DLPGFVREEIDGYVKDVY-----------DESEVSAEAASKKRKDGGSEDENNIADDE-- 542

Query: 541 SPQKQDSLSPDHLAPSSVRSGTGSNVE--PVIPDKRVLNQEIAEGGDVSNSSVITSVTSE 598
            P+ + + + D  AP+ +R+     V    ++    + N+  A GG    + +  S    
Sbjct: 543 EPKAKKAATEDK-APTKIRADDHDEVAGLAMLAHDELENKSTAVGGKSGGAGIKVSFAQV 601

Query: 599 V 599
           V
Sbjct: 602 V 602


>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
 gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
          Length = 636

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/478 (44%), Positives = 305/478 (63%), Gaps = 11/478 (2%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++E
Sbjct: 19  RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIRE 78

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +     ++E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   +  L
Sbjct: 79  ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
              EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D   
Sbjct: 138 KLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ +
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVL 377

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 429
              A+     L W G VES++R L   +E++ +  L     Q  P P E  D  +     
Sbjct: 378 LASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMW 437

Query: 430 AFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
              +GL +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 438 VIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLRRKEL 493


>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
          Length = 637

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/478 (44%), Positives = 305/478 (63%), Gaps = 11/478 (2%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++E
Sbjct: 20  RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIRE 79

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +     ++E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   +  L
Sbjct: 80  ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
              EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D   
Sbjct: 139 KLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 258

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPIIT
Sbjct: 259 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ +
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVL 378

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 429
              A+     L W G VES++R L   +E++ +  L     Q  P P E  D  +     
Sbjct: 379 LASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMW 438

Query: 430 AFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
              +GL +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 439 VIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAVHLRRKEL 494


>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
 gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
          Length = 880

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 218/549 (39%), Positives = 312/549 (56%), Gaps = 51/549 (9%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQ G+T  IS+A P   D+QR  EL K L    ++ES++E   R ++L ++  + K W
Sbjct: 35  PAKQLGMTSAISLAEPRAEDLQRTEELSKSLEPYNVFESQDELNHRMEILAKLNTLVKQW 94

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F    
Sbjct: 95  VKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFF 153

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L ++D
Sbjct: 154 EVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLD 213

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
             +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA+LVA
Sbjct: 214 PRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVA 273

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ H MP
Sbjct: 274 RTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMP 333

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS++NVS ST +V++ +F  G +I +E+ L +  W  LFE   FF  YR++
Sbjct: 334 IITPAYPQQNSTFNVSESTKKVILTEFNRGMSITDEIMLGRVSWDRLFEAPSFFYRYRHF 393

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPY----------- 415
           + + + +  ADD L W G VES++R L   +ER+ +  L     +C              
Sbjct: 394 IVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIVLAHVNPKCFELKKGAASANNSQ 453

Query: 416 ---------------PHEYVDTSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
                          P +   T+ P   C+ +F+GL+ +  E +      D+  S++ F 
Sbjct: 454 NNSGNEEDLKQQQQQPAQTAVTTAP--FCSLWFIGLEFERSENL----NIDLTESIQNFT 507

Query: 460 LSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
             + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N + 
Sbjct: 508 EHVIMHGLNIKMLKEGMAIDARHLKRKQLSLYLDADFLKRER--------KSMESHNNFN 559

Query: 516 TGSGLKRKK 524
                 RK+
Sbjct: 560 NTLLANRKR 568


>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
           Full=Polynucleotide adenylyltransferase beta; AltName:
           Full=Testis-specific poly(A) polymerase
 gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
 gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
          Length = 636

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/478 (44%), Positives = 305/478 (63%), Gaps = 11/478 (2%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++E
Sbjct: 19  RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 78

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +     ++E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   +  L
Sbjct: 79  ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
              EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D   
Sbjct: 138 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ +
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVL 377

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 429
              A+     L W G VES++R L   +E++ +  L     Q  P P E  D  +     
Sbjct: 378 LASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMW 437

Query: 430 AFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
              +GL +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 438 VIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 493


>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
 gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
          Length = 637

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/478 (44%), Positives = 305/478 (63%), Gaps = 11/478 (2%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++E
Sbjct: 20  RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 79

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +     ++E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   +  L
Sbjct: 80  ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
              EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D   
Sbjct: 139 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 258

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPIIT
Sbjct: 259 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ +
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVL 378

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 429
              A+     L W G VES++R L   +E++ +  L     Q  P P E  D  +     
Sbjct: 379 LASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMW 438

Query: 430 AFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
              +GL +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 439 VIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 494


>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
          Length = 670

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/480 (43%), Positives = 292/480 (60%), Gaps = 15/480 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T  IS+ GP   D ++ +EL + L   G++E++EE   R  VLG++ QI KDW++
Sbjct: 12  KTYGITSAISLVGPRPEDNRQTKELVEALKPHGVFENEEELNHRLVVLGKLDQIVKDWIR 71

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +   +     + +     I+TFGSYRLGVH  GADID LCV P +V R  DFF   ++I
Sbjct: 72  LVAEEKNIPPNIADTVGGKIYTFGSYRLGVHTKGADIDTLCVAPLHVERS-DFFKSFYDI 130

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           +  + E  + + V +A VPV+K  FDG+ +D+L+A ++  VV E+LD++D S+L ++D  
Sbjct: 131 VKALPETKDCRAVEEAFVPVIKLVFDGIEMDILFARLALRVVPENLDLTDDSLLKNLDPK 190

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL +VP+ E+F  TLR +K WAK++GVYSN  GFLGGV+WA+LVAR 
Sbjct: 191 CVRSLNGCRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAMLVART 250

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPI 312
           CQLYPNA  S LV++FF V+T W WP PV+L   + + ELGF+ WDPR N  D+ H MPI
Sbjct: 251 CQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMPI 310

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP  NS+YNVS ST  V+  + Q G  I +E+   KA W  LFE   FF  Y++Y+
Sbjct: 311 ITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFESSNFFGKYKHYI 370

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC------ 426
            +   A N DD L W G VES++R L   +ER+ + KL  H YP + +  S P       
Sbjct: 371 VLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKL-AHVYP-KSISPSTPLDGSEEE 428

Query: 427 ----AHCAFFMGLQRKP-GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 481
                   +F+GL+ +P G         DI+  V             + GM+I   H++R
Sbjct: 429 KTDEHSTLWFIGLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGMKIEAKHVKR 488


>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
           AltName: Full=Polynucleotide adenylyltransferase alpha-A
 gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
          Length = 715

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/498 (42%), Positives = 311/498 (62%), Gaps = 21/498 (4%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PK +G+T PIS+A   + D    ++L + L   G++E  EE++ + ++LG++  + K+W+
Sbjct: 1   PKTFGITSPISLAAAKDTDCTLMQKLIETLKPYGVFE--EEEQLQHRILGKLNNLVKEWI 58

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           +E++ L+     ++E+    IFTFG YRLGVH  GADIDALCV P +V R  DFF   ++
Sbjct: 59  REISELKHLPQSVIENVGGKIFTFGPYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYD 117

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
            L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D 
Sbjct: 118 KLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDI 177

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             +RSLNGCRV D+IL LVPN++ F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR
Sbjct: 178 RCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVAR 237

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
            CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPI
Sbjct: 238 TCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPI 297

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L KA+WS LF+   FF+ Y++Y+
Sbjct: 298 ITPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYI 357

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCA 427
            +   A      L W G VES++R L   +E++ +  L     +  P P E ++  K   
Sbjct: 358 LLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPRSFPAPSENME--KEEF 415

Query: 428 HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRK 482
              + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RK
Sbjct: 416 RTMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVDRQAINSKMF-ETEMKIAAMHVKRK 473

Query: 483 QI----PPYVFPEGYKRT 496
           Q+    P +V P+  K +
Sbjct: 474 QLHQLQPSHVSPKKKKHS 491


>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
          Length = 606

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 234/575 (40%), Positives = 324/575 (56%), Gaps = 47/575 (8%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS +     + +    L + L   G++ES+EE + RE VLGR+  + K +VK ++
Sbjct: 9   GVTPPISTSESNPREKEVTVTLLEELRRQGIFESEEEAKMREIVLGRLAALIKKFVKRVS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             RG S+     A   I+TFGSYRLGVHGPG DID LCV P +V+RE DFF +L  +L E
Sbjct: 69  LARGLSESAANSAGGKIYTFGSYRLGVHGPGTDIDTLCVVPRHVTRE-DFFNVLEGMLRE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           ME VTE+  V +A VP++K +  G+ IDLL+A +S   + +DLD+ D ++L ++DE  VR
Sbjct: 128 MEGVTEVSGVPEAFVPIIKTEISGIPIDLLFAQLSLAAIPDDLDLRDDNLLKNLDERCVR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RV ++IL+LVPNV+ F   LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 188 SLNGSRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNAV   +VSRFF +   W WP PV+L  I++  L   VW+PR   +D+ H MPIITPA
Sbjct: 248 YPNAVAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NV  ST ++M ++F+ G+ I ++V   + QWSALF  + FF  YR YLQV  
Sbjct: 308 YPSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFRYRFYLQVIA 367

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH-------- 428
            + + D    W G VES++RQL + +E     KL  HP+   + DT   C          
Sbjct: 368 SSPDLDTQNKWSGTVESKIRQLVMRLEFVDTLKL-AHPFIKGF-DTVYYCLSEDETRAVA 425

Query: 429 ---------------------------CAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKL 460
                                       +FF+GL  KP E    G ++ DI     EF  
Sbjct: 426 RGEIPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLDISYPTNEF-- 483

Query: 461 SINMYMFWKP----GMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT 516
            I M   W+      M I V HI+   +P +VF +G +R    R   + R+++       
Sbjct: 484 -IKMVRLWEKYDESQMNIVVRHIKHTALPDFVFDKG-EREAAARPKKRSRTAKESPAPSA 541

Query: 517 GSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPD 551
                    P   D + P KR +IS Q +   +PD
Sbjct: 542 KRSRMESDTPARPDSESPLKRSTISSQGRQLSTPD 576


>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
          Length = 628

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/590 (39%), Positives = 325/590 (55%), Gaps = 48/590 (8%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  GVT PI+ +     + +  R L + L   G +ES++E + RE VLGRI  + K +V 
Sbjct: 11  QHLGVTPPIATSESNPREKEVTRTLLEELKRQGTFESEDESKTREIVLGRIAALVKKFVH 70

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +    G SD     A   IFTFGSYRLGVHGPG+DID LCV P +VSRE DFF +  ++
Sbjct: 71  TVALREGLSDAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFDVFEHM 129

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + E V E+  V DA+VP++K K  G+ IDL+ A ++   + +DL + D ++L ++D+ 
Sbjct: 130 LKDAEGVAEVSGVPDAYVPIIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLRNLDDR 189

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNG RV D+IL+LVPNV  F  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+
Sbjct: 190 CVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARI 249

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV   +VSRFF +   W WP PV+L  I++  L   VW+P+    D+ H MPII
Sbjct: 250 CQLYPNAVAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPII 309

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++NV+ ST  +M ++F+  + I ++V +NKA WS LF  + FF  YR YLQ
Sbjct: 310 TPAYPSMCATHNVTQSTQMIMTEEFKKASEIVDKVIINKASWSDLFARHDFFHKYRYYLQ 369

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH---------------- 417
           V     + +  + W G VESR+RQL + +E      L  HP+                  
Sbjct: 370 VIASTGSPELQVKWSGTVESRVRQLVMKLEYVESLAL-AHPFIKGFEQVSYCINDEEVRS 428

Query: 418 ------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEF 458
                             E ++ +       F++GL  +P +    G ++ DI     EF
Sbjct: 429 VAQGEVSEAVARRKKEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRRLDISYPTTEF 488

Query: 459 KLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE-YQT 516
              + M+  F +  M I V HI+   +P YVF +G    R PRLA ++   E  +    T
Sbjct: 489 TKLVKMWEKFDEQKMGIVVRHIKSSALPEYVFDDG---ERQPRLAQKRPKKETTDRSSNT 545

Query: 517 GSGLKRKKD----PESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGT 562
              +  KK     PE      P +   +S +  D+L P H   SSV   T
Sbjct: 546 SPDMPNKKPRHSLPEMSTVTLPHETVKVS-ENGDTL-PHHGVTSSVERPT 593


>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
          Length = 637

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/519 (42%), Positives = 320/519 (61%), Gaps = 15/519 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PK YG++ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+
Sbjct: 16  PLPKCYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKE 75

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 76  WIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 134

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 135 YVKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 375 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE- 433

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RR
Sbjct: 434 -FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRR 491

Query: 482 KQIPPYVFPEGYKRTRHPRLASQQRSSE-NGNEYQTGSG 519
           K++   + P    + +  +    +R ++ N N +   +G
Sbjct: 492 KEL-HQLLPHHVLQDKKAQATESRRLTDLNDNSFDLSAG 529


>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
           B]
          Length = 629

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/606 (38%), Positives = 324/606 (53%), Gaps = 55/606 (9%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS       + +    L   L   G +E++EE + RE VLGR+  + K +V+ ++
Sbjct: 9   GVTPPISTNESNAREKEVTVTLMDELRRQGTFETEEEAKTREIVLGRVAALVKRFVRHVS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             RG S+     A   IFTFGSYRLGVHGPG+DID LCV P +VSRE DFF +   +L E
Sbjct: 69  LKRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVFEEMLKE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            E VTE   V DA+VP++K K  G+ +DLL A ++   + +DL + D ++L ++DE  VR
Sbjct: 128 TEGVTEASGVPDAYVPILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLLRNLDERCVR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RV D+IL+LVPNV  F  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 188 SLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA+   +VSRFF +   W WP PV+L  I++  L   VW+P+    D+ H MPIITPA
Sbjct: 248 YPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NVS ST  +M ++F+ G+ I ++V + KA WS LF  + FF  YR YLQV  
Sbjct: 308 YPSMCATHNVSASTQMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDFFHKYRYYLQVIA 367

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------- 417
              + +    W G VESR+RQL + +E      L  HP+                     
Sbjct: 368 STGSQELQTKWAGTVESRIRQLVMKLEYVDSLTL-AHPFIKGFEQVSCCLSDEEVRAVAQ 426

Query: 418 ---------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLS 461
                          E  D +       F++GL  +P +    G ++ DI     EF   
Sbjct: 427 GEISEVIAKRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGPRKLDISYPTTEFTKL 486

Query: 462 INMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ-RSSENGNEYQTGSG 519
           + M+  +    M I V HI+   +P YVF  G    R PR A ++ ++S+N ++    S 
Sbjct: 487 VKMWEKYDDSTMGIVVRHIKSTALPDYVFEPG---ERQPRSAQKRPKTSKNADKSNNTS- 542

Query: 520 LKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSG-TGSNVEPVIPDKRVLNQ 578
                       D P K++  S    +SL+   L P   ++   G      IP    L  
Sbjct: 543 -----------PDMPNKKRRASNSVSESLATTPLPPQPFKTAQNGVTSTAAIPSPIALTA 591

Query: 579 EIAEGG 584
             +  G
Sbjct: 592 ASSSNG 597


>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
 gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
          Length = 625

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/536 (39%), Positives = 318/536 (59%), Gaps = 21/536 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  GVT  IS+A P  +D+Q+ +ELE+ L    ++ES  E   R +VL ++  + K+W+ 
Sbjct: 28  KTLGVTSAISLALPKISDIQKTKELEEALKPFNVFESDAELNFRMEVLSKLNNLVKEWII 87

Query: 74  ELT-RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           +++   +     + E     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F   + 
Sbjct: 88  DISVNQKNMPKNVAEQVGGKIYTFGSYRLGVHQKGADIDALCVAPRHIDRS-DYFTSFYE 146

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L E +EV++L+ V +A VPV+K  FDG+ IDLL+A ++   + +D+D+ D  +L ++D+
Sbjct: 147 LLKEQKEVSQLRSVENAFVPVIKMNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQ 206

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRSLNGCRV D+IL+LVPN E+F   LR +K WAK+  VYSN  G+LGGV+WA+LVAR
Sbjct: 207 KCVRSLNGCRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVAR 266

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
            CQLYPNAV + LV +FF V++ W+WP PV+L   D   L F VWDPR N  D+ H MPI
Sbjct: 267 TCQLYPNAVAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPI 326

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP  NS++NVS ST  +M D+ + G +I E++ L K  W  LFE   FF  YR+Y+
Sbjct: 327 ITPAYPQQNSTFNVSLSTRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFFSKYRHYI 386

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC--- 429
            + + + + +D L W G VES++R L   +ER+ +  L  H  P  +    +P ++    
Sbjct: 387 VLLLSSNSPEDQLEWCGLVESKIRLLVGNLERNHHINL-AHVNPDSFQQPQEPDSNVLCT 445

Query: 430 AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVF 489
            +F+G+       +     +DI    +           WK GM++   +++RK++  Y+ 
Sbjct: 446 MWFIGVVFAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTSYLS 505

Query: 490 PEGYKRTRHPRLASQQRS---SENG---------NEYQTGSGLKRKKDPESVDQDG 533
           P   K+ +  RL +   +   S+NG            +T SG   KK P +VD++ 
Sbjct: 506 PSVLKKEK--RLNTTPNASPGSKNGGVQEKNKKRKMAETTSGPMAKK-PRAVDENA 558


>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
          Length = 637

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/478 (44%), Positives = 305/478 (63%), Gaps = 9/478 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YG++ PIS+A P E D    + L + L   G++E + E ++R  VL ++  + K+W++
Sbjct: 19  KRYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEGELQRRILVLEKLNNLVKEWIR 78

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   +  
Sbjct: 79  EISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAK 137

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR 
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYII 377

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A+     L W G VES++R L   +E++ +  L     Q  P P E  D  +    
Sbjct: 378 LLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTM 437

Query: 429 CAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
               +GL++ +  E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 438 WVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRRKEL 494


>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
          Length = 634

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/484 (44%), Positives = 309/484 (63%), Gaps = 11/484 (2%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           +P P K+YG++ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + 
Sbjct: 11  TPQPAKRYGISAPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLV 70

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALC+ P +V R  DFF 
Sbjct: 71  KEWIREISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFT 129

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 130 SFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 189

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           D+D  ++RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+
Sbjct: 190 DLDIRSIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAM 249

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVAR CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H
Sbjct: 250 LVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYH 309

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ LNKA+WS LFE   FF+ Y
Sbjct: 310 LMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKY 369

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV----DTSK 424
           ++Y+ +   A      L W G VES++R L   +E++ +  L  H  P  ++    +  K
Sbjct: 370 KHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGK 428

Query: 425 PCAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIR 480
                 + +GL  +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+R
Sbjct: 429 KEFRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-ETGMKIAAMHLR 487

Query: 481 RKQI 484
           RK++
Sbjct: 488 RKEL 491


>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
          Length = 637

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/483 (44%), Positives = 306/483 (63%), Gaps = 13/483 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P PK YG++ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+
Sbjct: 16  PLPKCYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKE 75

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 76  WIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 134

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 135 YVKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  + 
Sbjct: 375 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE- 433

Query: 426 CAHCAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRR 481
                + +GL  +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RR
Sbjct: 434 -FRTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRR 491

Query: 482 KQI 484
           K++
Sbjct: 492 KEL 494


>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
 gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
          Length = 492

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/474 (43%), Positives = 288/474 (60%), Gaps = 12/474 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T PISMA P  +D+ R R+LE  L + GL+ES +E   R +VL +I ++ K W+ 
Sbjct: 25  KTLGMTSPISMAPPKASDVARTRDLEDTLRQFGLFESADELAHRMEVLSKINELVKQWIY 84

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     + E+    I+TFGSYRLGVH  GADID LCV P +V R  DFF     +
Sbjct: 85  DVSVKKNMPPSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHVDRT-DFFSSFVEL 143

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  F G+ +D+L+A ++   + E  D+ D+++L ++D  
Sbjct: 144 LRQQEEVKDLRAVEEAFVPVIKMTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDPK 203

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL LVPN E F  +LR +K WAK+ GVYSNV G+LGGV+WA+LVAR 
Sbjct: 204 CVRSLNGCRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVART 263

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  + LV +FF V++ W WP PV+L   +E +LGF VWDPR N  D+ H MPII
Sbjct: 264 CQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPII 323

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS ST  +M  +F+ G  I +E+ L + +W  LFEP  FF  Y++++ 
Sbjct: 324 TPAYPQQNSTFNVSVSTRTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPNFFGKYKHFIV 383

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC------A 427
           +       +  L W G VES++R L   +ER  Y ++  H  P  +     PC       
Sbjct: 384 LMATTMTKEHHLEWYGLVESKIRILISNLERHPYIEI-AHVNPESF----PPCEPDGDKL 438

Query: 428 HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 481
              +F+GLQ    E V     +DIR  V+  K         K  ME+ + ++RR
Sbjct: 439 QSMWFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIKYVRR 492


>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
           (Polynucleotide adenylyltransferase gamma) (SRP RNA
           3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
           [Ciona intestinalis]
          Length = 833

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/490 (42%), Positives = 300/490 (61%), Gaps = 10/490 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A PTE D     +L + +   G++ES+ E   R  VLG++ +I K++V 
Sbjct: 6   KTYGITSPISLAEPTEKDRVLTEKLIEHIEPYGVFESESEHSARRIVLGKLNEIVKEFVM 65

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++  R     +++ A   ++TFGSYRLGV   GADID LCV P +V+R  DFF +   +
Sbjct: 66  NVSEERKLPQSLIDTAGGKLYTFGSYRLGVCAKGADIDTLCVVPRHVNRS-DFFSVFCTL 124

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  EV+EL+ + DA VPV+K KF+G+ ID+L++ ++  VV  D D+ D S+L ++D  
Sbjct: 125 LKERSEVSELRAIEDAFVPVIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNLDIR 184

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+E+F  TLR +K WAKR+G+YSN+ G+LGGV+WA+LVAR 
Sbjct: 185 CIRSLNGCRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLVART 244

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPI 312
           CQLYPNA+ S LV RFF V++ W WP PV+L   +E+  L   VWDPR N  D+ H MPI
Sbjct: 245 CQLYPNAIASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPI 304

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP  NS+YNV+ S+L VM  +F  G  +  E+  NK+ W  L E   FF  Y++++
Sbjct: 305 ITPAYPQQNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPNFFNEYKHFI 364

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY---GKLQCHPYPHEYVDTSKPCAHC 429
            +   A + ++   W G VES++R L   +ER+ Y     +    YP E  +     A+ 
Sbjct: 365 VLMASAESQENFNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDVTTAYV 424

Query: 430 -AFFMGLQRKPGEVVQEGQQF--DIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
             +F+GL R   +++        DI+   +      +    +K GM++  ++ RR Q+P 
Sbjct: 425 NRWFLGL-RFVKDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRSQLPK 483

Query: 487 YVFPEGYKRT 496
           Y+ PE    T
Sbjct: 484 YL-PESIAAT 492


>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
          Length = 496

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/486 (43%), Positives = 296/486 (60%), Gaps = 9/486 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY- 419
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 421

Query: 420 --VDTSKPCAHCA-FFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +  K   + + +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 422 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 481

Query: 474 ICVSHI 479
           I  +H+
Sbjct: 482 IEATHV 487


>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
          Length = 615

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/519 (40%), Positives = 302/519 (58%), Gaps = 39/519 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T  ISMAGP   D+++  EL++ LV  G++ES+ E   R +VLG + ++ + W++
Sbjct: 29  KTLGMTSAISMAGPKPIDIEKTNELKESLVPFGVFESEAEMHHRMEVLGSLHRLVRQWIR 88

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  +     + +     I+TFGSYRLGVH  GADIDALCV P ++ R  D+F   + +
Sbjct: 89  DESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIDRS-DYFQSFYEL 147

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  +V +L+ V DA VPV+K  FDG+ IDLL+A ++   + +  D+ D  +L ++D+ 
Sbjct: 148 LKEQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQK 207

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL+LVP++  F  TLR +K WAKR G+YSN  G+LGGV+WA+LVAR 
Sbjct: 208 CVRSLNGCRVTDEILRLVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVART 267

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+P+ L+ +FF V++ W+WP PV+L   D   LGF VWDPR N  D+ H MPII
Sbjct: 268 CQLYPNALPATLLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPII 327

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS++NVS+ST  V+M++F+ G  I +E+ L K  W  LFE   FF  Y++++ 
Sbjct: 328 TPAYPQQNSTFNVSSSTRTVIMEEFRLGLAITDEIMLGKCGWERLFEAANFFSRYKHFIV 387

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------VDTSKPCA 427
           +   +AN  D L W G VES++R L   +ER+ +  +  H  P  Y       +   P A
Sbjct: 388 LLASSANTLDQLPWCGLVESKIRHLITTLERNQHITI-AHVNPECYNSVPLNTNNGHPLA 446

Query: 428 -----------HCAFFMGLQRKPGEVVQE-------GQQFDIRGSVEEFKLSINMYM--- 466
                      H A    ++   GE+V         G  FD      +    I+ +    
Sbjct: 447 LPPGTPVQTEEHGA--AEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDLTYDISSFTKAV 504

Query: 467 --------FWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
                     + GM I   H+RRKQ+  Y+ P   +R +
Sbjct: 505 HYQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREK 543


>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
 gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
          Length = 872

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/556 (39%), Positives = 310/556 (55%), Gaps = 57/556 (10%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  + K 
Sbjct: 35  PAAKQLGMTSAISLAEPRPEDLQRTGELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQ 94

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F   
Sbjct: 95  WVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSF 153

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
             +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L ++
Sbjct: 154 FEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNL 213

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA+LV
Sbjct: 214 DPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLV 273

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ H M
Sbjct: 274 ARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLM 333

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  YR+
Sbjct: 334 PIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRVPWERLFEAPSFFYRYRH 393

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEY---------- 419
           ++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+          
Sbjct: 394 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNAHIALAHVNPKCFEFKKGQSANSSQ 453

Query: 420 ---------------------------VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 452
                                      V +S  C+   +F+GL+ +  + +      D+ 
Sbjct: 454 NNSGNEDDPKQTQQQQTNNQANAAASTVTSSPFCS--MWFIGLEFERSDNL----NIDLT 507

Query: 453 GSVEEFKLSINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
            S++ F   + M+       K GM I   H++RKQ+  Y+  +  KR R        +S 
Sbjct: 508 ESIQNFTEHVIMHGVNIKMLKEGMTIDARHVKRKQLSLYLDADFLKRER--------KSM 559

Query: 509 ENGNEYQTGSGLKRKK 524
           EN N +       RK+
Sbjct: 560 ENHNNFNNTLLANRKR 575


>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 556

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 219/546 (40%), Positives = 306/546 (56%), Gaps = 49/546 (8%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           MS+   P   GVT PIS+    E +      L + L   G +ES+EE + RE VLGR+  
Sbjct: 1   MSTNGAPTYLGVTPPISVNESNEREKLVTVSLMEELRRQGTFESEEESKTREIVLGRLAS 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           + K +V +++   G S+   + A   IFTFGSYRLGVHGPG DID LCV P +VSRE DF
Sbjct: 61  LIKKFVHKISLQHGLSEAAADAAGGKIFTFGSYRLGVHGPGTDIDTLCVVPKHVSRE-DF 119

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F  L  +L E E VTE+  V +A+VP++  K  G+ IDL  A ++   + +DL + D ++
Sbjct: 120 FEALEPMLRETEGVTEVTGVPEAYVPIVTTKISGIPIDLTMARLALSSIPDDLTLQDDNL 179

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L ++DE  +RSLNG RV D+IL+LVPNVE F   LRC+K WA+++ +YSNV GFLGGV W
Sbjct: 180 LRNLDERCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGVAW 239

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVAR+CQLYP+AV   +VSRFF +   W WP PV+L  I++  L   VW+PR    D+
Sbjct: 240 AMLVARICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADR 299

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
           +H MPIITPAYP M +++NVS ST  +M ++F+ G+ I E+V +   QWS LF  + FF 
Sbjct: 300 SHRMPIITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVEKVIMGTTQWSELFVKHDFFH 359

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
            YR YLQV     + D  + W G VESR+RQL + +E      +      H +V   +  
Sbjct: 360 KYRYYLQVIASTGDPDLHIKWAGTVESRIRQLVMKLEY-----VDSLTLAHPFVKGFEQV 414

Query: 427 AHC--------------------------------------AFFMGLQRKPGEVVQEG-Q 447
            HC                                       F++GL  +P +    G +
Sbjct: 415 THCLTDDEVRDAAQGEISDAIAKRKKEDIEGKEGASVVYSTTFYIGLAIEPKQAGAVGPR 474

Query: 448 QFDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 506
           + DI     EF   + M+  + +  M I V HI+   +P +VF EG    R PR A ++ 
Sbjct: 475 RLDISYPTTEFTKQVKMWEKYDESAMGIVVRHIKSTALPDHVFDEG---ERQPRSALKRP 531

Query: 507 SSENGN 512
            +  G+
Sbjct: 532 KTAKGS 537


>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
          Length = 640

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/497 (43%), Positives = 313/497 (62%), Gaps = 15/497 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YG++ PIS+A P E D    ++L + L   G++E +EE ++R  +L ++  + K+W++
Sbjct: 18  KRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIR 77

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           EL+  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   ++ 
Sbjct: 78  ELSESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 137 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR 
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVART 256

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIA 376

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  +    
Sbjct: 377 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEEFRTM 436

Query: 429 CAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQ--- 483
               + L+R +  +++     +DI+   +  ++ ++N  MF +  M+I   H+RRK+   
Sbjct: 437 WVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMF-EMDMKIAAMHLRRKELHQ 495

Query: 484 -IPPYVFPEGYKRTRHP 499
            +P +V P+  K+T  P
Sbjct: 496 LLPNHVLPQ--KKTPSP 510


>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
           [Oryctolagus cuniculus]
          Length = 629

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/525 (42%), Positives = 321/525 (61%), Gaps = 22/525 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YG++ PIS+A P E D    ++L + L   G++E +EE + R  +L ++  + K+W++
Sbjct: 19  KRYGISSPISLAAPKETDCALTQKLIETLRPFGVFEEEEELQSRILILEKLNNLVKEWIR 78

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  R   + +VE     +FTFGSYRLGVH  GADIDALCV P +V R  DFF   ++ 
Sbjct: 79  EISESRSLPEAVVESVGGRLFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 137

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 138 LKLREEVRDLRAVEEAFVPVIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVP++++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR 
Sbjct: 198 CIRSLNGCRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I  E+ LNKA+WS LFE   FF+ Y++Y+ 
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIV 377

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  +    
Sbjct: 378 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 435

Query: 429 CAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
             + +GL  +KP   E++     +DI+   +  ++ +IN   F +  M+I   H+RRK++
Sbjct: 436 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKTF-EMDMKIDAMHLRRKEL 494

Query: 485 PPYVFPEGYKRTRHP----RLASQQRS-----SENGNEYQTGSGL 520
              +     ++ +HP    RL +   S     SEN     + +GL
Sbjct: 495 HQLLPNHVLQKKKHPAEGVRLTAVSDSSLGTDSENSMPVPSPTGL 539


>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
          Length = 637

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/480 (44%), Positives = 304/480 (63%), Gaps = 13/480 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG++ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++
Sbjct: 19  KCYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 79  EISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVK 137

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LVAR 
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L+KA+WS LFE   FF+ Y++Y+ 
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIV 377

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  +    
Sbjct: 378 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE--FR 435

Query: 429 CAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
             + +GL  +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 436 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAMNSKMF-EMGMKITAMHLRRKEL 494


>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
          Length = 1653

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/555 (38%), Positives = 312/555 (56%), Gaps = 77/555 (13%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGL---------------------YESKE 52
           K  G+T  IS A P   D+Q+ +ELEK L + GL                     +E++ 
Sbjct: 27  KTLGMTSAISTAEPKPEDLQKTQELEKSLGKCGLVREEQYPGLMCQDFPLEPYNVFEAES 86

Query: 53  EDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDA 112
           E   R ++L ++  + K WV++++  R   +   E     I+TFGSYRLGVH  GADIDA
Sbjct: 87  ELNHRMEILAKLNTLVKQWVRDVSISRHMPEATAEKLGGKIYTFGSYRLGVHHKGADIDA 146

Query: 113 LCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISR 172
           LCV P  + R  D+F     +L +  EVTE + V +A VPV+K  FDG+ IDLL+A ++ 
Sbjct: 147 LCVAPRNIDRS-DYFGSFFELLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLAL 205

Query: 173 LVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRR- 231
             + ++ D+ D  +L ++D+ +VRSLNGCRV D+IL+LVPN+++F   LR +K WAKR+ 
Sbjct: 206 KEIPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKL 265

Query: 232 -------------------------------GVYSNVTGFLGGVNWALLVARVCQLYPNA 260
                                          G+YSN  G+ GGV+WA+LVAR CQLYPNA
Sbjct: 266 LPHGLISPEGMCDERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNA 325

Query: 261 VPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 320
           V + LV +FF V++ W+WP PV+L   D   LGF VWDPR N +D+ H MPIITPAYP  
Sbjct: 326 VAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQ 385

Query: 321 NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 380
           NS++NVS+ST +VM+ +F  G  I +++ + K  W  LFE   FF  YR+++ + + ++N
Sbjct: 386 NSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSN 445

Query: 381 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------VDTSK 424
           ADD L W G VES++R L   +ER+ +  L  H  P  Y                 D ++
Sbjct: 446 ADDHLEWCGLVESKIRYLIQNLERNQHINL-AHVNPKCYEQHEQNPAATLNAGGGADANQ 504

Query: 425 -PCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 482
            P A C+ +F+GL+ +  E +      D+  S++ F  S++ +   K GM+I   H+RRK
Sbjct: 505 TPAAFCSLWFIGLEFERTENL----NVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRK 560

Query: 483 QIPPYVFPEGYKRTR 497
           Q+  Y+     KR R
Sbjct: 561 QLASYLDANLLKRER 575


>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
          Length = 465

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/419 (46%), Positives = 269/419 (64%), Gaps = 2/419 (0%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420


>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
           98AG31]
          Length = 529

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/512 (42%), Positives = 296/512 (57%), Gaps = 40/512 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT PIS+ GPT A+      L   L E   +ES EE   RE VLGR+  + K++V 
Sbjct: 1   KTYGVTGPISINGPTRAEELSTTALMDELKERRTFESPEEARARELVLGRLNLLVKEFVI 60

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++   G SD +  +    IFTFGSYRLGVHGPG+DID LCV P  V+RE  FF IL  +
Sbjct: 61  KVSLALGMSDHVARETGGKIFTFGSYRLGVHGPGSDIDTLCVVPRQVTREH-FFEILPQM 119

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  EVTEL  V +A VP++  KF G+ +DLL+A ++   V +DL++ D ++L ++D+ 
Sbjct: 120 LKERPEVTELSTVPEAFVPIISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDDR 179

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSL G RV D+IL+LVP+VE F  +LR +K WAK R VYSNV GF GGV WA+  ARV
Sbjct: 180 CVRSLGGSRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTARV 239

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG--FSVWDPRKNRRDKTHHMP 311
           CQLYPN   + +V+RFF V + W WP+PV+L AI    +G    VW+P+   +D+ H MP
Sbjct: 240 CQLYPNKPAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMP 299

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYPCM S++NV+ ST +VMM +F+ G  + + +    AQWSALFE + FF  YRNY
Sbjct: 300 IITPAYPCMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKHDFFTRYRNY 359

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH--- 428
           +Q+   +  AD  L W G VESRLR L L +E      +  HP+   + +T+        
Sbjct: 360 IQITASSPEADAHLKWAGTVESRLRLLVLKVEEIETVDM-AHPFIKGFSNTTYALNRQEV 418

Query: 429 -------------------------------CAFFMGLQRKPGEVVQEG-QQFDIRGSVE 456
                                          C+FF+GL   P  V   G ++ DI   V 
Sbjct: 419 SLVQGGDMPNEIASRIPEDYENRADVEVVHTCSFFVGLLVHPKPVGHVGPRKLDITYPVG 478

Query: 457 EFKLSINMYM-FWKPGMEICVSHIRRKQIPPY 487
           EF   +  +  + +  M I V HI++   P +
Sbjct: 479 EFTRMVKQWEGYSEDKMSISVRHIKKSVYPSF 510


>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
 gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
          Length = 429

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/419 (46%), Positives = 269/419 (64%), Gaps = 2/419 (0%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLD 182

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D S L  +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 183 LRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 242

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 243 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 302

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 303 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 362

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +
Sbjct: 363 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420


>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
          Length = 637

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/478 (44%), Positives = 301/478 (62%), Gaps = 11/478 (2%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++E
Sbjct: 20  RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 79

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +     ++E+    IFTFGSYRLGVH  GADIDALCV PS+V R  DFF   +  L
Sbjct: 80  ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
              EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D   
Sbjct: 139 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GF GGV+WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTC 258

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QLYPNAV S LV ++F V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPIIT
Sbjct: 259 QLYPNAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP  NS+YNVS ST  VM++ F+ G  I  E+ L KA WS LFE   FF+ Y++Y+ +
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKYKHYIVL 378

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 429
              A+     L W G VES++R L   +E++ +  L     Q  P P E  D  +     
Sbjct: 379 LASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMW 438

Query: 430 AFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
              +GL +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 439 VIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKEL 494


>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
          Length = 607

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/518 (42%), Positives = 308/518 (59%), Gaps = 50/518 (9%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS    +  + +    L   L   G++ES+EE + RE VLGR+  + K +V++++
Sbjct: 9   GVTPPISTNESSIREKEVTTTLMGELQRQGIFESEEEAKTREIVLGRLAALIKKFVRQVS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             RG S+     A   I+TFGSYRLGVHGPGADID LCV P +V+R+ DFF +L  +L E
Sbjct: 69  LSRGLSEAAANAAGGKIYTFGSYRLGVHGPGADIDTLCVAPRHVTRD-DFFNVLEGMLRE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           ME VTE+  V +A+VP++  +  G+ IDLL+A +   ++ EDLD+ D ++L ++DE ++R
Sbjct: 128 MEGVTEVSGVPEAYVPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLLRNLDEKSIR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RV ++IL+LVPNV+ F T LRC+K WA++R VYSNV GFLGGV WA+LVARVCQL
Sbjct: 188 SLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAMLVARVCQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNAV   +VSRFF +   W WP PV+L  I++  L   VW+P+   +D++H MPIITPA
Sbjct: 248 YPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NV  ST ++M ++FQ G  I ++V L KA+WSALF  + FF+ YR YLQV  
Sbjct: 308 YPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRYRFYLQV-- 365

Query: 377 VAANADDLL--AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH------ 428
           VAA+ D  +   W G V S++RQL + +E     KL  HP+   + D    C        
Sbjct: 366 VAASRDLEMQNKWSGTVASKIRQLVMRLEYVDALKL-AHPFIKGF-DVVYYCLSEEEAQV 423

Query: 429 -----------------------------CAFFMGLQRKPGEVVQEG-QQFDIRGSVEEF 458
                                         +FF+GL  KP E    G ++ DI     EF
Sbjct: 424 VTRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLDISYPTTEF 483

Query: 459 KLSINMYMFWKP----GMEICVSHIRRKQIPPYVFPEG 492
              + M   W+      M I V HI+   +P +VF  G
Sbjct: 484 ---VKMTKMWEKYDESAMHIAVRHIKHTVLPDFVFEPG 518


>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
          Length = 629

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/547 (39%), Positives = 311/547 (56%), Gaps = 38/547 (6%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS A  ++ + +  + L + L   G +E+ EE   RE VLGR+    K +V++++
Sbjct: 9   GVTLPISTADSSDREKELTKTLMEELRRQGTFENVEESRTRELVLGRVAAAVKKFVRQVS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             RG S+     A   IFTFGSYRLGVHG G+DID LCV P +V RE DFF     IL E
Sbjct: 69  LSRGLSESAATAAGGKIFTFGSYRLGVHGAGSDIDTLCVVPKHVLRE-DFFETFEPILRE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           +E  +E+  V +A+VP++K K  G+ +D L A ++   + +DL + D ++L ++DE  +R
Sbjct: 128 VEGASEVSGVPEAYVPIIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDERCIR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SL G RV D+IL+LVPNVE +  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 188 SLGGSRVNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVARICQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNAV   +VSRFF +   W WP PV+L  I+E  L   VW+P+    D++H MPIITPA
Sbjct: 248 YPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M S++NV+ ST  ++ ++F+ G  I ++V +  A W+ LF  + FF  YR YLQV  
Sbjct: 308 YPAMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSATWADLFRKHDFFHKYRYYLQVIA 367

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIE-----------------------RDTYGKLQCH 413
              N +  + W G VESRLRQL + +E                        D    + C 
Sbjct: 368 STDNTETQIKWAGTVESRLRQLVMKLEYVDSLILAHPFIKGFDQVCHCSTEDEIRSVACG 427

Query: 414 PYPH----------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLSI 462
             P           + V+ ++     AF++GL+ +P      G ++ DI     EF   +
Sbjct: 428 EIPEAVRKRKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPTTEFTKLV 487

Query: 463 NMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLK 521
            M+  + +  M I V H++   +P YVF EG ++ R  R   +  + ++ N   +  G  
Sbjct: 488 KMWEKYNETTMGIYVRHMKSTSLPDYVFDEGERQPRQNRKRPKNNAGKSSN--ASPDGPN 545

Query: 522 RKKDPES 528
           ++  PES
Sbjct: 546 KRPRPES 552


>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
          Length = 637

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/480 (43%), Positives = 302/480 (62%), Gaps = 13/480 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+ G++ PIS+A P E D    + L + L   G++E +EE ++R  VL ++  + K+W++
Sbjct: 19  KRLGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +     ++++    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 79  EISESKSLPQSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYAK 137

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+  FLGGV+WA+LVAR 
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVART 257

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S LV +FF V++ W WPNPV+L   ++  L   VWDPR N  D+ H MPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPII 317

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I  E+ L KA+WS LFE   FF+ Y++Y+ 
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQKYKHYIV 377

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K    
Sbjct: 378 LLASATTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDMEK--FR 435

Query: 429 CAFFMGL-QRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
             + +GL  +KP   E++     +DI+   +  ++ ++N  MF + GM+I   H+RRK++
Sbjct: 436 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EVGMKITAMHLRRKEL 494


>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
          Length = 474

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/464 (44%), Positives = 293/464 (63%), Gaps = 14/464 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P + D    ++L + L   G++E +EE + R  +LG++  + K+W++
Sbjct: 15  KTYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNLVKEWIR 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++ L+     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 75  EISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEK 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L KA+WS LF+   FF+ Y++Y+ 
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYIL 373

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
           +   A      L W G VES++R L   +E++ +  L     Q  P P E  +T K    
Sbjct: 374 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSE--NTEKEEFR 431

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMF 467
             + +GL  K  E   E    D+   ++ F     + +IN  MF
Sbjct: 432 TMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF 474


>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
 gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
          Length = 667

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/564 (37%), Positives = 306/564 (54%), Gaps = 60/564 (10%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  GVT PI+  GPT  +++  + L   L + G++ES EE + RE +LG++  + KD+
Sbjct: 16  PTRNLGVTPPIATNGPTSREIEVTKTLVAELEKQGVFESDEESKIREVILGKLDAMVKDF 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           V  ++   G S+ +   A   IFTFGSYRLGVHGPG+DID LCV P +V RE DFF +  
Sbjct: 76  VYRVSISHGMSETLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFE 134

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
           ++L E EEVTE+  V  AHVP++  KF G+ ID  +A ++   V ++L + D ++L ++D
Sbjct: 135 SMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRNLD 194

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E  VRSL G RV D IL+LVPN+  F   LRC+K WA+RR +YSNV GFLGGV WA+L A
Sbjct: 195 ERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTA 254

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R+CQLYPN     +VSRFF +   W+WP PV+L  I++  L   VW+P+    D+ H MP
Sbjct: 255 RICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMP 314

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP M +++NVS ST  VM  +F+    + + V + K  W  LF  + FF  Y+ Y
Sbjct: 315 IITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDFFFKYKYY 374

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPY--------------- 415
           LQV   + +AD  L W G VES++RQL + +E      + C HP+               
Sbjct: 375 LQVIASSGSADLQLKWHGTVESKIRQLVMKLE--LVPTITCAHPFIKGFDQVSECWNDHE 432

Query: 416 ---------PHEYVDTSKPCAH------------------------------CAFFMGLQ 436
                    P E    ++  A                                 F++GL 
Sbjct: 433 VRLVATGDIPEEVAQRTQKVAALPETDEAKQAAAEEAARVTEGKEGHRMIYTTTFYIGLS 492

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKR 495
            +P    +  ++ DI     EF   +  +  + +  M I V HI+  Q+P YVF  G  R
Sbjct: 493 IEPKLAGEGPRKLDISYPTAEFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYVFEGGENR 552

Query: 496 TRHPRLAS-QQRSSENGNEYQTGS 518
                ++    + +++GN+ + GS
Sbjct: 553 VSAAAVSKVNGKRAKSGNKKKNGS 576


>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
          Length = 689

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/559 (40%), Positives = 326/559 (58%), Gaps = 29/559 (5%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS A P   D++    LE  L + G++++ E  + R  VLG++ ++ K W+ +++
Sbjct: 11  GVTGPISTAVPKPQDIKLTNLLEACLQKYGVFDTPEGQKHRLLVLGKLNELVKKWIIDIS 70

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           + +G S+   ++    IFTFGSYRLGVHG GADID L V P ++ R  DFF     +L E
Sbjct: 71  KEKGKSEAEAKEVGGTIFTFGSYRLGVHGKGADIDTLLVAPRHIERT-DFFSSFKELLFE 129

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            + VT ++ V DA VPV+K +FDG+ +DLL+A ++  V+ + L + DMS+L ++D   VR
Sbjct: 130 AKNVTNVRAVPDAFVPVIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDAKCVR 189

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRV D ILKLVPN E F   LR +K WAKRRG+YSN  G+LGGV+WA+LVAR CQL
Sbjct: 190 SLNGCRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQL 249

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDPRKNRRDKTHHMPIIT 314
           YPNA  S +V +FF V+  W WP PV+L   +E  LG +  VW+P+ N  D  H MPIIT
Sbjct: 250 YPNAASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIIT 309

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP  NS++NV+ ST  VM+++F+ G  IC ++++ K  W  LFEP  FF  Y++Y+ +
Sbjct: 310 PAYPQQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEPIKFFSLYKHYIVI 369

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHP--YPHEYVDTSKPCAHCAF 431
              A ++D LL W G VES++R L   +E +   K+   +P  YP    D++   +H  +
Sbjct: 370 CATAIDSDLLLKWSGLVESKIRILIGKLEDNENIKIAHVNPTSYPRIVPDSTD--SHLMW 427

Query: 432 FMGLQ--RKPGEV----VQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
           F+GL+    PG V      E Q F I   V+   L  +  +  + G ++ V H RR+ + 
Sbjct: 428 FIGLEFCVGPGGVNITLTYEIQMF-INSVVKSPALQSSPDL--RNGTQLDVKHARRRDLS 484

Query: 486 PYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQ 545
            Y+ P+       P L  +++      E  +   LKR    E V++    KR  I     
Sbjct: 485 DYLSPDIV-----PPLPKKKKQFPIDIETPSPI-LKRVHKIERVEEPRVSKRIKIMDD-- 536

Query: 546 DSLSPDHLAPSSVRSGTGS 564
               PD L  SS+  G  +
Sbjct: 537 ----PDSLTDSSIGGGEAT 551


>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
 gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
          Length = 647

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/492 (40%), Positives = 308/492 (62%), Gaps = 24/492 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+GVT PIS + PT  D +   +L   +    LYE+ E  +KREQ+L  + ++ ++W+ 
Sbjct: 22  KQWGVTPPISESLPTPQDYKLTEQLIIAMRSENLYETVEGMKKREQILASLNKMVREWIY 81

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E +     S++    A   I+TFGSYRLGV   G+DID LC+ P +++R+  F F L  +
Sbjct: 82  EASLEHSMSEEESLTAGGGIYTFGSYRLGVVAAGSDIDTLCIVPRHITRDSFFTFFLAKL 141

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
             ++  +T++QPV DA+ P++K  + G+ +DLL+A ++   +  DL+  D  +L +VDE 
Sbjct: 142 QQDIH-ITKIQPVPDAYTPIIKMVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEK 200

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           T RSLNGCRV D IL+LVPN E F T LR +K W+K RG+YSNV G+LGG++WA+L AR+
Sbjct: 201 TARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARI 260

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE------LGFSVWDPRKNRRDKT 307
           CQLYPN+ P+ +++RFF VY  W+W NPV+LC I E        +GF VW+P  N +D+ 
Sbjct: 261 CQLYPNSAPNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRA 320

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPA+P MNS++NV+ +TLRV+ ++ Q G+ + +E+E  +AQWS L+ PY+FFE+
Sbjct: 321 HLMPIITPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPYMFFEN 380

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDTSK- 424
           +++++QV ++A +      W GW+ES++R L   +E  T+  LQ  P+P   +  D  K 
Sbjct: 381 HKHFIQVKMLANSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQESDNQKD 438

Query: 425 --PCAHCAFFMGL------QRKPGEVVQEGQQFDIRGSVEEFK---LSINMYMFWKPGME 473
               A C  ++GL          G+        D+RG++ +F    ++ N    +K  ++
Sbjct: 439 GFQFAQC-MYIGLVLCTTSGNNNGKSTGITPVVDLRGAILDFVGFIMNWNEVEIYKDSID 497

Query: 474 ICVSHIRRKQIP 485
           + V H+R K +P
Sbjct: 498 LKVKHLRFKDLP 509


>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
          Length = 657

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/487 (41%), Positives = 303/487 (62%), Gaps = 19/487 (3%)

Query: 5   ERMSSPPPP-----KQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKRE 58
           E   S  PP     K+Y GVT P+S+A P E D++ +++LEK +   G++E++EE   R 
Sbjct: 2   ESAPSEAPPAGDGQKKYPGVTSPLSLAPPKEHDLELSKKLEKEMAPYGVFETEEEQAHRM 61

Query: 59  QVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPS 118
           +VL ++  + K W+++++  +   + ++E     ++TFGSYRLGV+  GADID LCV P 
Sbjct: 62  EVLNKVNILVKAWIRDVSLSKSMPESLIEVVGGGVYTFGSYRLGVNTKGADIDTLCVAPR 121

Query: 119 YVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRED 178
           +V R  DFF      L +  EV + + V +A VPV+K +FDG+ +D+L+A ++  VV E+
Sbjct: 122 HVLRS-DFFGSFFESLKQHPEVKDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEEN 180

Query: 179 LDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVT 238
            ++ D S+L ++D   +RSLNGCRV D+IL LVPN+E F  TLR +K WAK++G+YSN  
Sbjct: 181 QNLRDESLLKNLDIRCIRSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNAL 240

Query: 239 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-DEAELGFSVW 297
           GFLGGV+WA+LVAR CQLYP+A P+ L+ +FF +++ W WP PV+L  + DE +L  +VW
Sbjct: 241 GFLGGVSWAMLVARTCQLYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVW 300

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
           DPR N  D+ H MPIITPAYP  NS+YNVS ST ++MMD+F+    +   V  NK +W +
Sbjct: 301 DPRVNVSDRFHLMPIITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKDEWGS 360

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
           LF+P  FF+ Y++Y+ +   +   D  L W G VES++R L   +E++ +  +  H  P 
Sbjct: 361 LFQPSDFFQKYKHYIVLVARSDTEDHQLEWVGLVESKIRILVGNLEKNPFICI-AHVNPK 419

Query: 418 EY---VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF---KLSINMYMFWKPG 471
            +    D   P     +F+GL  K G        +DI+  ++      L+IN+    K G
Sbjct: 420 SFGPNEDDESPYI-AKWFVGLIFKTGTQTNIDLTYDIQNFMDIVYRQALTINLL---KKG 475

Query: 472 MEICVSH 478
           ME+ V H
Sbjct: 476 MEVEVKH 482


>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
 gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
          Length = 595

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/597 (37%), Positives = 319/597 (53%), Gaps = 65/597 (10%)

Query: 11  PPPKQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAK 69
           P  K Y GVT PIS A   E + +    L + L     +ES+EE   RE VLGR+  + K
Sbjct: 6   PAQKPYLGVTPPISTAESNEREKEVTVTLMEELRRQNTFESEEEARTREIVLGRVAALVK 65

Query: 70  DWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI 129
            +V +++  RG S+   + A   IFTFGSYRLGVHGPG+DID LCV P +V+RE DFF  
Sbjct: 66  KFVYKISIARGLSESAAQAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFFDT 124

Query: 130 LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLND 189
              +L EME VTE+  V +A+VP++K + DG+ +D L A ++   + +DL + D ++L +
Sbjct: 125 FEPMLKEMEGVTEVSGVPEAYVPIIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRN 184

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +DE  VRSL G R  ++IL+LVPNV+ F   LRC+K WA+RR +YSNV GFLGGV WALL
Sbjct: 185 LDERCVRSLGGSRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALL 244

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VAR+CQLYPNA+   +VSRFF +   W WP PV+L  I++  L   VW+P+    D+ H 
Sbjct: 245 VARICQLYPNALAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHR 304

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP M S++NV+ ST  +M ++F+ G  I + V +  AQWS LF  + FF  YR
Sbjct: 305 MPIITPAYPSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDFFHKYR 364

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------ 417
            YLQ+     + D    W G VESR+RQL + +E      +  HP+              
Sbjct: 365 YYLQIIASTGDPDLQNKWSGTVESRIRQLVMKLEY-VESLILAHPFIKGFDQVSYCLNED 423

Query: 418 ----------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGS 454
                                 E  + S+      F++GL  +P      G ++ DI   
Sbjct: 424 EVKAVVQGEISEAIASRKKEDIEGKEGSQTVYTTTFYIGLAIQPKPAGAVGPRRLDISYP 483

Query: 455 VEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE 513
            ++F   + M+  + +  M I V HI+   +P  VF  G +    P   +Q+R       
Sbjct: 484 TQDFSKLVKMWDKYDESKMGIIVRHIKSSALPDNVFDPGER----PAKVTQKRV------ 533

Query: 514 YQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVI 570
                    K    ++  + P KRQ  S    D++ P         +GT +   PV+
Sbjct: 534 ---------KGKSSNISSEQPNKRQRSSTSVADTIRPTE-------NGTSTGTTPVV 574


>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
          Length = 513

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/484 (44%), Positives = 301/484 (62%), Gaps = 15/484 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAXLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H  
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLX 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVS ST  V +++F+ G  I +E+ L+KA+WS LFE   FF+ Y++
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKH 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKP 425
           Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K 
Sbjct: 374 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--KE 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIR 480
                + +GL  K  E   E    D+   ++ F     + +IN   F +   +I   H++
Sbjct: 432 EFRTXWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKXF-EVDXKIAAXHVK 489

Query: 481 RKQI 484
           RKQ+
Sbjct: 490 RKQL 493


>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
 gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
          Length = 527

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/402 (48%), Positives = 261/402 (64%), Gaps = 2/402 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +GVT PISM GPTE D++    LE  L    ++ES EE + RE VLGR+  + K++V 
Sbjct: 6   KMWGVTPPISMNGPTEKDLEVTNALEAELRANNVFESPEEAKLREVVLGRVDALVKEFVY 65

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
             +   G S+     +   IFTFGSYRLGVHGPG+DID LCV P +V RE DFF I   +
Sbjct: 66  RASIKHGLSESAARASGGKIFTFGSYRLGVHGPGSDIDTLCVAPKHVQRE-DFFEIFEAL 124

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   ++VTE+  V +A+VP++K KF G+SID L++ I+   + + L++ D ++L ++DE 
Sbjct: 125 LQARDDVTEVTSVPEAYVPLIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKNLDER 184

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSL G RV D+IL LVPNV  F   LRC+K WA RR +YSNV GFLGGV WA+LVAR+
Sbjct: 185 DVRSLGGSRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAMLVARI 244

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPN V   +VSRFF +   W+WP PV+L  I++  L   VW+PR    D+ H MPII
Sbjct: 245 CQLYPNEVAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPII 304

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++NV+ ST  VM ++F+ G+ + + +   K  W+ LFE   FF  Y+ YLQ
Sbjct: 305 TPAYPSMCATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDFFHKYKYYLQ 364

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           V   + +AD  L W+G VESRLRQL + +E      L  HP+
Sbjct: 365 VIASSGSADLQLKWQGTVESRLRQLIMKLEL-VPALLCAHPF 405


>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
          Length = 605

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/564 (36%), Positives = 316/564 (56%), Gaps = 47/564 (8%)

Query: 2   SSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVL 61
           S S   S+    +  G+T  ISMA P  +D+ R  EL++ L    ++ES+EE   R ++L
Sbjct: 11  SGSREQSNNQNLRTLGMTSAISMAEPKLSDLSRTNELKEALKPYNVFESEEELNHRMEIL 70

Query: 62  GRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVS 121
            ++  + K W+++ +  R     + +     I+TFGSYRLGVH  GADIDALCV P +++
Sbjct: 71  SKLNALVKQWIRDTSIARNMPPNVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIN 130

Query: 122 REEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDI 181
           R  D+F    ++L    EVT+L+ V +A+VPV+K  FDG+ ID+L+A ++   V + +D+
Sbjct: 131 RS-DYFSSFFDLLKSQMEVTDLRAVEEAYVPVIKMNFDGIEIDMLFAKLALKEVPDSMDL 189

Query: 182 SDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFL 241
            D  +L ++D+  VRSLNGCRV D+IL+LVPN+E+F   LR +K WAK+ G+YSNV G+L
Sbjct: 190 RDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYL 249

Query: 242 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK 301
           GGV+WA+LVAR CQLYPNAV + L+ +FF V++ W+WP PV+L + +   LGF VWDPR 
Sbjct: 250 GGVSWAMLVARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPRV 309

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
              D+T                         +M + F+ G  I EE+ + KA W  LFEP
Sbjct: 310 TMSDRT-------------------------IMQEAFETGLAITEEIIMGKASWDKLFEP 344

Query: 362 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHE 418
             FF  YR+Y+ +   ++ A+D L W G VES++R L   +ER+   T   +    +P  
Sbjct: 345 PNFFGKYRHYIVLLASSSTAEDQLEWCGLVESKIRHLIGTLERNPNITLAHINPESFPPL 404

Query: 419 YVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSH 478
             +  K  +   +F+GL  K GE +      DI+  VE  +        +K GM I   H
Sbjct: 405 KPEAGKHVS--MWFIGLTFKKGENLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKH 462

Query: 479 IRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN-----EYQTGSGLKRKKDPESVDQDG 533
           ++RK +  Y+     KR R    ++Q+  + +GN       Q    L+++K  +S++ + 
Sbjct: 463 VKRKDLSNYIAANQIKRERKTSSSTQRNGNSSGNGGVSPRNQGDQTLRKRKSDQSLESND 522

Query: 534 PEKR-----------QSISPQKQD 546
            +++           QS + QK+D
Sbjct: 523 KKRKIQDSEQQHQHPQSTTQQKED 546


>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
          Length = 598

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/403 (45%), Positives = 272/403 (67%), Gaps = 2/403 (0%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P Q GVT PIS    TE +++   +L + L   GL+ES++E +KR  VLG++ ++ K++V
Sbjct: 6   PIQLGVTPPISTEPSTEREIKLTNDLLETLKSYGLFESEQEAQKRVVVLGKLDKLVKEFV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            ++++++G+ D +  +A   IFT+GSYRLGVHG GADID LCV P +V RE  FF I+++
Sbjct: 66  YKVSKMKGFPDSLAREAGGKIFTYGSYRLGVHGAGADIDTLCVFPKHVEREH-FFTIMYD 124

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L E  EVTE+  V DA+VPV+K  F G+ ID + A ++   V +DL+++D ++L ++DE
Sbjct: 125 MLKERPEVTEISAVPDAYVPVIKMHFSGIPIDFICARLAVARVPDDLELADNNILKNLDE 184

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRSLNG RV D IL+LVPNV  F   LR +K WAK + +YSNV GFLGGV WA+L+AR
Sbjct: 185 RCVRSLNGSRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGVAWAMLIAR 244

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +CQLYPNA  + +V+RFF +   W+WP PV+L  +++  L   VW+P+    D++H MPI
Sbjct: 245 ICQLYPNACAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMPI 304

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP M +++NV+ ST ++M+ +F+ G  +   + L   QWS LF    FF+ +++YL
Sbjct: 305 ITPAYPSMCATHNVTESTRKIMIQEFKNGIDVASNIILGSGQWSDLFVKSDFFQQFKHYL 364

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           Q+   + +++  L W G VE++LRQL L +E     +L  HPY
Sbjct: 365 QITSSSYSSETQLMWSGLVEAKLRQLVLKLETVDMIEL-AHPY 406


>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
 gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
          Length = 859

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/512 (40%), Positives = 307/512 (59%), Gaps = 29/512 (5%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS++GP E D+  + +L+++L   G +E++EE   R +VL +I    K WV+ ++
Sbjct: 154 GVSQPISISGPDEFDIVMSAKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRVVS 213

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           + R   D  V+     +FTFGSYRL VH  GADID+LCV P +V R  DFF   + +LAE
Sbjct: 214 KRRQMPDSEVQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDRN-DFFTSFYEMLAE 272

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
               TEL+ V +A VPV+K K+ G+ +D+L+A ++   V ED  ++D S+L ++DE +VR
Sbjct: 273 DPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVR 332

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRVAD+IL+LVPNV +F   LR +K WAK  G+YSNV G+LGGV+WA+LVAR CQL
Sbjct: 333 SLNGCRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQL 392

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHM 310
           YPN  P+ LV +FF +YT W WP+PV+L       A D   L   VWDPR    D+ H M
Sbjct: 393 YPNTGPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDRFHLM 452

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PI+TPA+P  NS++NV+ S+L+++M++ + G     ++   KA+WSALFE   FF  Y++
Sbjct: 453 PIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKAEWSALFEEVNFFSRYKH 512

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--------VDT 422
           +L +  ++A   D L W G VES++R L   +ER    ++ CH +   Y        V  
Sbjct: 513 FLALLCLSATEQDELVWCGLVESKIRFLIASLERRESIRV-CHVHTKYYQPRNDPLPVQV 571

Query: 423 SKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVS 477
           S     C  +F+GL           ++ DI+  V+ F   +N        +  GM +   
Sbjct: 572 SLQNPRCRLWFIGLDLNK----TVSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPH 627

Query: 478 HIRRKQIPPYV----FPEGYKRTRHPRLASQQ 505
           ++R+ ++  ++      +G K  +  R+A+ Q
Sbjct: 628 YLRKAELVKWLKMEDLTKGRKAPKRRRIAASQ 659


>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
           [Cavia porcellus]
          Length = 741

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/489 (43%), Positives = 303/489 (61%), Gaps = 23/489 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEEPQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFG--SYRLGV---HGPGADIDALCVGPSYVSREED 125
           W++E++  +   + +  D+    FT+G   YR+G    +  GADIDALCV P +V R  D
Sbjct: 75  WIREISESKVSPESVFLDSG---FTWGPCKYRIGXWDYYFLGADIDALCVAPRHVDRS-D 130

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF   ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S
Sbjct: 131 FFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDS 190

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           +L ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+
Sbjct: 191 LLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVS 250

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D
Sbjct: 251 WAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSD 310

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF
Sbjct: 311 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 370

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYV 420
           + Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  
Sbjct: 371 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 430

Query: 421 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEIC 475
           D  K      + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I 
Sbjct: 431 D--KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIA 486

Query: 476 VSHIRRKQI 484
             H++RKQ+
Sbjct: 487 AMHVKRKQL 495


>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
          Length = 618

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/511 (38%), Positives = 292/511 (57%), Gaps = 36/511 (7%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P   GVT+P++   P    ++    L   +    L+E+   + +RE VLGR+  + K++V
Sbjct: 4   PHYLGVTRPVTTDPPKPHSLRMTESLMAEMRARNLFETDAGERRRESVLGRLDGMVKEFV 63

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           +   +LRG S   +++A   IFTFGSYRLGVHGPGADID LCV P YV R  DFF I  +
Sbjct: 64  RRACQLRGRSQSEIDEAGGKIFTFGSYRLGVHGPGADIDTLCVVPVYVERA-DFFTIFLD 122

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L E ++V ++  + +A+VP++K KF  + IDL +A I+R  V +DL++ D ++L  +DE
Sbjct: 123 MLRERDDVRDITDIPEAYVPLIKVKFTNVEIDLTFARINRPTVPDDLELGDDNLLKQLDE 182

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRSLNG RV DQIL+LVPN+  F  +LR +K+WAKRR VY+NV GF GGV+WA+LVAR
Sbjct: 183 RDVRSLNGSRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLVAR 242

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +CQLYPN  P  ++SRFF ++ +W+WP PV+L  + +  L   VW+P  N  D+ H MP+
Sbjct: 243 ICQLYPNECPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPV 302

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP M S++N+S S++ V+  +++ G  I   + + +  W+ LFEP  FF  YR YL
Sbjct: 303 ITPAYPSMCSTHNISHSSMAVIKAEWERGENIVNRIAVGQTTWAELFEPTDFFYKYRYYL 362

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT--------SK 424
           Q+   + + D+ L W G VES+LR L   +E    G    H Y  E+  T         K
Sbjct: 363 QITASSQDMDNQLKWSGTVESKLRTLGANLE-GAEGVTLAHIYVDEFEKTYSCKTEEEVK 421

Query: 425 PCAHCA--------------------------FFMGLQRKPGEVVQEGQQFDIRGSVEEF 458
             A  A                          F++GL    G      ++ D+     EF
Sbjct: 422 LVASGASTPEISARTEDDIKDVEGAVKLHTSNFYIGLSIDLGPKGSGSKKLDLSYPTCEF 481

Query: 459 KLSINMYMFWKPGMEICVSHIRRKQIPPYVF 489
              +  +  + P M I V +++   +P +VF
Sbjct: 482 TKLVKRWEKYTPEMGITVRYMKNIALPDFVF 512


>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
          Length = 386

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/370 (49%), Positives = 251/370 (67%), Gaps = 1/370 (0%)

Query: 3   SSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           +S+  ++ P PK YG+T PIS+A P EAD+   R+L + L   G++E + E ++R  VLG
Sbjct: 6   TSQVQTAQPTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLG 65

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++  + K W++E++  +     +++     IFTFGSYRLGVH  GADIDALCV P +V R
Sbjct: 66  KLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER 125

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
             DFF   +  L E EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + E+LD+ 
Sbjct: 126 T-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLR 184

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  +L ++D   +RSLNGCRV D+IL LVPN+E+F  TLR +K WAKR  +YSN+ GFLG
Sbjct: 185 DDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLG 244

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           GV+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L   ++  L   VWDPR  
Sbjct: 245 GVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVT 304

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITPAYP  NS+YNVS ST  +M+++F+ G  I +E+  NKA WS LFE  
Sbjct: 305 PSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAP 364

Query: 363 LFFESYRNYL 372
            FF+ Y+  L
Sbjct: 365 NFFQKYKYVL 374


>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
          Length = 435

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/370 (49%), Positives = 251/370 (67%), Gaps = 1/370 (0%)

Query: 3   SSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           +S+  ++ P PK YG+T PIS+A P EAD+   R+L + L   G++E + E ++R  VLG
Sbjct: 6   TSQVQTAQPTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLG 65

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++  + K W++E++  +     +++     IFTFGSYRLGVH  GADIDALCV P +V R
Sbjct: 66  KLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER 125

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
             DFF   +  L E EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + E+LD+ 
Sbjct: 126 T-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLR 184

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  +L ++D   +RSLNGCRV D+IL LVPN+E+F  TLR +K WAKR  +YSN+ GFLG
Sbjct: 185 DDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLG 244

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           GV+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L   ++  L   VWDPR  
Sbjct: 245 GVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVT 304

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITPAYP  NS+YNVS ST  +M+++F+ G  I +E+  NKA WS LFE  
Sbjct: 305 PSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAP 364

Query: 363 LFFESYRNYL 372
            FF+ Y+  L
Sbjct: 365 NFFQKYKYVL 374


>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
          Length = 436

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/370 (49%), Positives = 251/370 (67%), Gaps = 1/370 (0%)

Query: 3   SSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           +S+  ++ P PK YG+T PIS+A P EAD+   R+L + L   G++E + E ++R  VLG
Sbjct: 6   TSQVQTAQPTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLG 65

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++  + K W++E++  +     +++     IFTFGSYRLGVH  GADIDALCV P +V R
Sbjct: 66  KLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER 125

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
             DFF   +  L E EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + E+LD+ 
Sbjct: 126 T-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLR 184

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  +L ++D   +RSLNGCRV D+IL LVPN+E+F  TLR +K WAKR  +YSN+ GFLG
Sbjct: 185 DDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLG 244

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           GV+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L   ++  L   VWDPR  
Sbjct: 245 GVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVT 304

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITPAYP  NS+YNVS ST  +M+++F+ G  I +E+  NKA WS LFE  
Sbjct: 305 PSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAP 364

Query: 363 LFFESYRNYL 372
            FF+ Y+  L
Sbjct: 365 NFFQKYKYVL 374


>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 615

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/554 (38%), Positives = 316/554 (57%), Gaps = 44/554 (7%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS +  TE + +    L   L    ++E+++E + RE VLGR+ Q+ K +V ++ 
Sbjct: 11  GVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKVA 70

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
            LRG S+   + A   IFTFGSYRLGVHGPG+DID LCV P +V+R+ DFF     +L E
Sbjct: 71  LLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLRE 129

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           ++ VTE+  V +A+VPV+K K  G+ +DLL A ++   + +DL + D ++L ++DE  +R
Sbjct: 130 LDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIR 189

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SL G RV D +L+LVP+V+ F  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 190 SLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQL 249

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA    +VSRFF +   W WP PV+L  I++  L   VW+P+    D++H MPIITPA
Sbjct: 250 YPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPA 309

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NV+ ST  +M ++F+ G  I ++V +  A WS LF  + FF  YR YLQV  
Sbjct: 310 YPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIA 369

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------- 417
              N+D  + W G VESR+RQL + +E      L  HP+                     
Sbjct: 370 STGNSDLQIKWAGTVESRIRQLIMKLEYVESLTL-AHPFIKGFDQVAYCLNEEEVRAIAQ 428

Query: 418 ---------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLS 461
                          E  + + P     F++GL  +P +    G ++ DI     EF   
Sbjct: 429 GETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQ 488

Query: 462 INMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL 520
           + ++  + +  M + V HIR   +P YVF  G +    P   +Q+R+   G  + T   +
Sbjct: 489 VKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGER----PPKVTQKRTKGPGKTHNTSPDM 544

Query: 521 --KRKKDPESVDQD 532
             KR++  +SV  D
Sbjct: 545 PNKRQRSSQSVTTD 558


>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
          Length = 658

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/405 (46%), Positives = 256/405 (63%), Gaps = 4/405 (0%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  GVT PI+  GPT  +++  + L   L + G++ES EE + RE +LG++  + KD+
Sbjct: 16  PTRNLGVTPPIATNGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDF 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           V  ++   G S+ +   A   IFTFGSYRLGVHGPG+DID LCV P +V RE DFF +  
Sbjct: 76  VYRVSIASGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFE 134

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L E EEVTE+  V  AHVP++  KF G+ ID  +A +S   V + L + D ++L ++D
Sbjct: 135 GMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLLRNLD 194

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E  VRSL G RV D IL+LVPN+  F   LRC+K WA+RR +YSNV GFLGGV WA+L A
Sbjct: 195 ERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTA 254

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R+CQLYPN     +VSRFF +   W+WP PV+L  I++  L   VW+P+    D+ H MP
Sbjct: 255 RICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMP 314

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP M +++NVS ST  VM  +F+    + + V + K  WS LF  + FF  Y+ Y
Sbjct: 315 IITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDFFFKYKYY 374

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPY 415
           LQV   + +AD  L W G VES++RQL + +E      + C HP+
Sbjct: 375 LQVIASSGSADLQLKWHGTVESKIRQLVMKLE--LVPTITCAHPF 417


>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
          Length = 628

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 219/540 (40%), Positives = 302/540 (55%), Gaps = 43/540 (7%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS    +  + +    L + L     +ES+EE + RE VLGR+  + K +V++++
Sbjct: 9   GVTPPISTTESSAREKEVTGTLMQELRRQKTFESEEEAKTREIVLGRLAALVKAFVRKVS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             RG S+     A   IFTFGSYRLGVHGPG+DID LCV P +V RE DFF +   +L E
Sbjct: 69  LSRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVLRE-DFFDVFEQMLRE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            E VTE   V +A+VP++K K  G+ ID L A ++   + +DL + D ++L ++D+  +R
Sbjct: 128 TEGVTECSGVPEAYVPIVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDDRCIR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SL G RV D+IL+LVPNV  F  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 188 SLGGSRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA+   +VSRFF +   W WP PV+L  I+E  L   VW+P+    D++H MPIITPA
Sbjct: 248 YPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NV+ ST  +M ++F+ G  I ++V +  A WS LF  + FF  YR YLQ  I
Sbjct: 308 YPAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDFFHKYRYYLQ--I 365

Query: 377 VAANADDLL--AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMG 434
           +A+  D  L   W G VESRLRQL + +E     +L  HP+   +   S   +       
Sbjct: 366 IASTGDPALQIKWAGTVESRLRQLVMKLEFVESLQL-AHPFIKGFEQISYCLSEEEMRAV 424

Query: 435 LQRKPGEVVQEGQQFDIR------------------------GSVEEFKLSIN------- 463
            Q +  E V + ++ DI                         GSV   KL I+       
Sbjct: 425 AQGEVSEAVAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGPRKLDISWPTTEFT 484

Query: 464 -MYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGS 518
            M   W    +  M I V HI+   +P YVF  G +R   P L  ++  S  G     GS
Sbjct: 485 KMVKSWDKFDETKMGIIVRHIKSSTLPDYVFDAG-ERQPKPALTKKRPKSVKGTTRPNGS 543


>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
          Length = 436

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/370 (49%), Positives = 251/370 (67%), Gaps = 1/370 (0%)

Query: 3   SSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           +S+  ++ P PK YG+T PIS+A P EAD+   R+L + L   G++E + E ++R  VLG
Sbjct: 6   TSQVQTAQPTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLG 65

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++  + K W++E++  +     +++     IFTFGSYRLGVH  GADIDALCV P +V R
Sbjct: 66  KLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER 125

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
             DFF   +  L E EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + E+LD+ 
Sbjct: 126 T-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLR 184

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  +L ++D   +RSLNGCRV D+IL LVPN+E+F  TLR +K WAKR  +YSN+ GFLG
Sbjct: 185 DDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLG 244

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           GV+WA+LVAR CQLYPNAV + LV +FF V++ W WPNPV+L   ++  L   VWDPR  
Sbjct: 245 GVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVT 304

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITPAYP  NS+YNVS ST  +M+++F+ G  I +E+  NKA WS LFE  
Sbjct: 305 PSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAP 364

Query: 363 LFFESYRNYL 372
            FF+ Y+  L
Sbjct: 365 NFFQKYKYVL 374


>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
          Length = 640

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/647 (36%), Positives = 361/647 (55%), Gaps = 45/647 (6%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YG+T  IS A PT+ D+Q  + L+  L    +  + E+  +R +VL  +  +AK+W++E+
Sbjct: 2   YGMTSAISDALPTDIDIQLTKSLDDALSREKVITTDEDLSQRLEVLSMLNNLAKEWIREV 61

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  R   +   E+   L+ TFGSYRLGV+  GADIDA+ + P +++R  D+F   +N L 
Sbjct: 62  SMERNLPEITAENVGGLVCTFGSYRLGVYHKGADIDAIVIVPRHITRT-DYFATFYNKLK 120

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           E   +  ++ V +A VPV+K    G+ ID+L+A ++   V ED D+    +L +++   V
Sbjct: 121 ENPSINNVRAVEEAFVPVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPKCV 180

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNGCRV D IL+LVPN E F  TL  +K WAKR  VYSN  G+LGGV+WA+LVARVCQ
Sbjct: 181 RSLNGCRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARVCQ 240

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNA P+ L+ +FF +++ W+WP PV+L      +LG+ VWDPR N  D+ H MPIITP
Sbjct: 241 LYPNAAPATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITP 300

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
            YP  NS++NVS STL ++ D+F+    I  E+   ++ WS +F+P  FF  YR +L + 
Sbjct: 301 VYPQQNSTFNVSHSTLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFFTKYRYFLAIT 360

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC----HPYPHEYV---DTSKPCAH 428
           + A   ++LL W+G VESRLR L   +E     +++C    H  P ++V   D S+    
Sbjct: 361 VFANCDEELLEWRGLVESRLRFLPTSLE-----EIECVQRSHLNPDQFVLPYDKSQGRPS 415

Query: 429 CAFFMGLQ--RKPGEVVQEGQQFDIRGSVEEFKLSIN--MYMFWKPGMEICVSHIRRKQI 484
             +F+GL+  +  G VV      D    + +F L +    +  +K GM+I V+H++RK +
Sbjct: 416 SVWFVGLEISKSNGTVV----NLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRKDL 471

Query: 485 PPYVFPEGYKRTRHPRLASQQ---RSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSIS 541
             YV  E  K    P     +   R S  G    +    + +K P S  + G E     +
Sbjct: 472 RDYVPDELKKEKAIPNTVGSKIIARLSTEGRHSVSELVEESQKSPTS-RKRGIEDETDDN 530

Query: 542 PQKQDSLSPDHL----APSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTS 597
             K++ LS D +    +  S RS +  N         ++N  ++   +  N S++T   +
Sbjct: 531 IIKKNLLSNDDIFVLGSVESHRSPSSEN-----KSNNLVNTLLSTAKE--NHSLLTE--N 581

Query: 598 EVGSCEDVGNESVAGSSEGNNGSVEGS---NNPVSSQSDCCDADSQS 641
           E     ++G ES+   ++  + ++E     N+PVS++  CC AD +S
Sbjct: 582 ETKENINIGKESLL-LTDARHSTIESGDSLNSPVSNK--CC-ADDES 624


>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
           Iowa II]
 gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
           Iowa II]
          Length = 699

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/510 (39%), Positives = 299/510 (58%), Gaps = 41/510 (8%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P KQYGVT PIS A  T  D +    L   + +  LYES E  +KRE VL  + ++ ++W
Sbjct: 16  PKKQYGVTPPISEAMATPQDYKLTENLIIAMRQENLYESVEGMKKREYVLASLNKLVREW 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + E +     +++    A   IFTFGSYRLGV   G+DID LC+ P ++SRE  F F L 
Sbjct: 76  IYEASLEHSMNEEEALSAGGGIFTFGSYRLGVVAAGSDIDTLCIAPRHISRESFFSFFLA 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +  ++  VT++QPV DA+ P++K  + G+ +DLL+A ++   +  DL+  D  +L +VD
Sbjct: 136 KLQQDIN-VTKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNVD 194

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           + T RSLNGCRV D IL+LVPN E F T LR +K W+K RG+YSNV G+LGG++WA+L A
Sbjct: 195 DKTARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILTA 254

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE------LGFSVWDPRKNRRD 305
           R+CQLYPNA PS +++RFF +Y  W+W NPV+LC I E        +GF VW+P  N +D
Sbjct: 255 RICQLYPNAAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQD 314

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPA+P MNS++NV+ +TL V+ D+ Q    I +++E +KA W  ++ P+LFF
Sbjct: 315 RAHVMPIITPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPFLFF 374

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           E +++++QV +++ N      W GW+ES+LR L   +E  T+  LQ  P+P    +  + 
Sbjct: 375 EKHKHFIQVKMLSNNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWPKAIQEQDE- 431

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQ---------------------FDIRGSVEEFKLSINM 464
            A   F        G V+                           D+RG++ +F   +  
Sbjct: 432 -AKDGFIFAQSMYIGLVLNNSNSNNGSSSTGVTGVSNSSGTAPVVDLRGAILDF---VGF 487

Query: 465 YMFW------KPGMEICVSHIRRKQIPPYV 488
            M W      K  +++ V H+R K +P ++
Sbjct: 488 IMNWSEVENYKDSIDLKVRHLRAKDLPKHL 517


>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
          Length = 576

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/447 (43%), Positives = 273/447 (61%), Gaps = 18/447 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  GVT PIS+A P   D+ +++ELE  L E GL+ES  E + R QVLGRI ++ + W++
Sbjct: 15  KYPGVTAPISVALPRPVDLDKSKELEAVLHEFGLFESASELDHRLQVLGRINELVQQWIQ 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +G  + +       IFTFGSYRLGVH  GADID LCV P +V R  DFF     +
Sbjct: 75  EVSIAKGVPENIASSTRGKIFTFGSYRLGVHTKGADIDTLCVAPRHVERT-DFFTSFVEL 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  +V +L+ V +A+VPV+K +FDG+  D+L+A ++   +  D ++ DM++L ++D  
Sbjct: 134 LKQQPQVRDLRAVEEAYVPVIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLKNLDAK 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNGCRV D+IL LVP++  F T LR +K WAK++GVYSNV G+LGGV+WA+LVAR 
Sbjct: 194 CVRSLNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAMLVART 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVML---CAIDEAELGFSVWDPRKNRRDKTHHM 310
           CQLYP+A  +++V +FF V++ W WP PV L    A  +   GFSVWD R N  D+ H M
Sbjct: 254 CQLYPHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITP YP  NS++N S ST  +M   F+ G  + E +   K  W  LF P  FF  Y+ 
Sbjct: 314 PIITPVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFSPPEFFGQYKT 373

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPCAHC 429
           ++ +  VA   +DLL W G VES++R L + +ER    ++   +P  +  V   KP    
Sbjct: 374 FIMLTAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKP---- 429

Query: 430 AFFMGLQRKPGEVVQEGQQFDIRGSVE 456
                    P E V+E Q+   + S E
Sbjct: 430 ---------PAEPVKEQQEESPKASAE 447


>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
           bisporus H97]
          Length = 615

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/554 (38%), Positives = 316/554 (57%), Gaps = 44/554 (7%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS +  TE + +    L   L    ++E+++E + RE VLGR+ Q+ K +V ++ 
Sbjct: 11  GVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKVA 70

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
            LRG S+   + A   IFTFGSYRLGVHGPG+DID LCV P +V+R+ DFF     +L E
Sbjct: 71  LLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLRE 129

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           ++ VTE+  V +A+VPV+K K  G+ +DLL A ++   + +DL + D ++L ++DE  +R
Sbjct: 130 LDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCIR 189

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SL G RV D +L+LVP+V+ F  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 190 SLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQL 249

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA    +VSRFF +   W WP PV+L  I++  L   VW+P+    D++H MPIITPA
Sbjct: 250 YPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPA 309

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NV+ ST  +M ++F+ G  I ++V +  A WS LF  + FF  YR YLQV  
Sbjct: 310 YPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIA 369

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------------------- 417
              N+D  + W G VESR+RQL + +E      L  HP+                     
Sbjct: 370 STGNSDLQIKWAGTVESRIRQLIMKLEYVESLTL-AHPFIKGFDQVAYCLNEEEVRAIAQ 428

Query: 418 ---------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLS 461
                          E  + + P     F++GL  +P +    G ++ DI     EF   
Sbjct: 429 GETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEFTKQ 488

Query: 462 INMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGL 520
           + ++  + +  M + V HIR   +P YVF  G +    P   +Q+R+   G  + T   +
Sbjct: 489 VKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGER----PPKVTQKRTKGPGKTHNTSPDM 544

Query: 521 --KRKKDPESVDQD 532
             KR++  +SV  D
Sbjct: 545 PNKRQRSSQSVTTD 558


>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 558

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/532 (40%), Positives = 304/532 (57%), Gaps = 41/532 (7%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS    T  + +    L + L      E++EE  +RE VLGR+  + K +V++++
Sbjct: 9   GVTPPISTGESTNREKEVTATLMEELRRQNTIETEEESRRREVVLGRVAALVKKFVRQVS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             RG S+     A   IFTFGSYRLGVHGPG+DID LCV P +VSRE DFF +   +L E
Sbjct: 69  MARGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVFEPMLKE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            +  +E+  V +A+VP++K K  G+  DLL A ++   + +DL + D ++L ++DE  +R
Sbjct: 128 ADGASEVSGVPEAYVPIIKAKLMGIPFDLLMARLALSSIPDDLSLKDDNLLRNLDERCIR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SL G RV D+IL+LVPNV  F  +LRC+K WA+RR +YSNV GFLGGV WA+LVAR+CQL
Sbjct: 188 SLGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA+   +VSRFF +   W WP PV+L  I+E  L   VW+P+    D++H MPIITPA
Sbjct: 248 YPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRSHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M S++NV+ ST  +M ++F+ G  I ++V +  A+WS LF  + FF  YR YLQV  
Sbjct: 308 YPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTAEWSELFAKHDFFHKYRYYLQVIA 367

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY----------------- 419
              +AD  + W G VESR+RQL + +E      +  HP+   +                 
Sbjct: 368 STGSADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPFIKGFEQIAYCTSDEEVRAVAQ 426

Query: 420 -----------------VDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFKLS 461
                            V+ +       F++GL  +P +    G ++ DI     EF   
Sbjct: 427 GETSDAITRRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPRRLDISYPTTEFTKL 486

Query: 462 INMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGN 512
           + M+  + +P M I V HI+   +P YVF EG    R PR A ++  +  G+
Sbjct: 487 VKMWEKYDEPTMGIVVRHIKSAALPDYVFDEG---ERQPRQALKRPKTAKGS 535


>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
          Length = 632

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/496 (39%), Positives = 291/496 (58%), Gaps = 27/496 (5%)

Query: 23  SMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYS 82
           S  G    D++R +EL+  L    +YES+ E  +RE+VLG + ++ +DW++  +  +G+ 
Sbjct: 18  SSGGLGALDIKRTKELDSLLKLEDVYESQSECTRREEVLGELNEMLQDWIRTRSLSKGHP 77

Query: 83  DQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI--------LHNIL 134
           D+ +      ++TFGSYRLGVHGP ADID+L +GP ++ R EDFF           ++ +
Sbjct: 78  DESIR---CNLYTFGSYRLGVHGPAADIDSLVIGPKHIDRAEDFFGFEEDDFEGSFYDYM 134

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVLNDVDEP 193
            + E   ++  V DA VP +K +F G  ID+ Y S+     V  DLD+    +L+ +D+ 
Sbjct: 135 RKHEGTEKIVAVPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDDA 194

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            V+SL GCRVAD +LKLV N   +   LR L+ WA RRGVYSNV GF GGVN A+LVARV
Sbjct: 195 GVKSLAGCRVADSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVARV 254

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHH 309
           CQLYPNA  SMLV  FF+++  W W  PVML ++D A      G   WD R N+ ++   
Sbjct: 255 CQLYPNASASMLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQL 314

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           M IITPAYP  NS++NVS+STL V+  +F+ G  +  +V + +A+W+ ++    FF  Y+
Sbjct: 315 MKIITPAYPAQNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSDVQFFAKYK 374

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC-AH 428
            YLQ+ + A N +D   W+GWV SRL+ L   +E  + G +  HP   ++ D  K    H
Sbjct: 375 TYLQLIVTADNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVH 434

Query: 429 CAFFMGLQRKPGEV---VQEGQQFDIRGSVEEFKLSINMYM-------FWKPGMEICVSH 478
           C  F GL   P       +E ++ ++  ++E F++++  Y+        WKPGM + +  
Sbjct: 435 CNVFFGLFPNPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKL 494

Query: 479 IRRKQIPPYVFPEGYK 494
           +R+K IP +  PEG K
Sbjct: 495 LRKKDIPSWALPEGGK 510


>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
 gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
          Length = 842

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/518 (39%), Positives = 305/518 (58%), Gaps = 29/518 (5%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS++GP E D+  + +L+++L   G +E++EE   R +VL +I    K WV+ ++
Sbjct: 150 GVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRIVS 209

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           + R   D  ++     +FTFGSYRL VH  GADID+LCV P +V R  DFF   + +LAE
Sbjct: 210 KRRQMPDSEIQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDRN-DFFTSFYEMLAE 268

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
               TEL+ V +A VPV+K K+ G+ +D+L+A ++   V ED  ++D S+L ++DE +VR
Sbjct: 269 DPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSVR 328

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRVAD+IL+LVPN+ +F   LR +K WAK  G+YSNV G+LGGV+WA+LVAR CQL
Sbjct: 329 SLNGCRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQL 388

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHM 310
           YPN  P+ LV +FF +YT W WP+PV+L       A D   L   VWDPR    D+ H M
Sbjct: 389 YPNTGPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHLM 448

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PI+TPA+P  NS++NV+ S+L+++M++ + G     ++   K  WSALFE   FF  Y++
Sbjct: 449 PIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKTGWSALFEEVNFFSRYKH 508

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--------VDT 422
           +L +  ++A   D L W G VES++R L   +ER    ++ CH +   Y        V  
Sbjct: 509 FLALLCLSATEQDELVWCGLVESKIRFLIASLERRESIRV-CHVHTKYYQPRNDPFPVQV 567

Query: 423 SKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVS 477
           S     C  +F+GL           ++ DI+  V+ F   +N        +  GM +   
Sbjct: 568 SLQNPRCRLWFIGLDLNK----TVSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPH 623

Query: 478 HIRRKQIPPYV----FPEGYKRTRHPRLASQQRSSENG 511
           ++R+ ++  ++       G K  +  R+A+ Q     G
Sbjct: 624 YLRKAELVKWLKMEDLTRGKKAPKRRRIATSQNQQATG 661


>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
          Length = 672

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/405 (45%), Positives = 256/405 (63%), Gaps = 4/405 (0%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  GVT PI+  GPT  +++  + L   L + G++ES EE + RE +LG++  + KD+
Sbjct: 16  PTRNLGVTPPIAANGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAMVKDF 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           V  ++   G S+ +   A   IFTFGSYRLGVHGPG+DID LCV P +V RE DFF +  
Sbjct: 76  VYRVSIANGMSESLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFE 134

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L E EEVTE+  V  AHVP++  KF G+ ID  +A +S   V + L + D ++L ++D
Sbjct: 135 TMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLLRNLD 194

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E  VRSL G RV D IL+LVPN+  F   LRC+K WA++R +YSNV GFLGGV WA+L A
Sbjct: 195 ERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWAMLTA 254

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R+CQLYPN     +VSRFF ++  W+WP PV+L  I++  L   VW+P+    D+ H MP
Sbjct: 255 RICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMP 314

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP M +++NVS ST  VM  +F+    + + V + K  W  LF  + FF  Y+ Y
Sbjct: 315 IITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDFFFKYKYY 374

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPY 415
           LQV   + +AD  L W G VES++RQL + +E      + C HP+
Sbjct: 375 LQVIASSGSADLQLKWHGTVESKIRQLVMKLE--LVPTITCAHPF 417


>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
 gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
          Length = 554

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/468 (42%), Positives = 289/468 (61%), Gaps = 16/468 (3%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           M S    +S  P   +GV++PIS A P   D+     L+  L E   +ESK+E   R +V
Sbjct: 1   MQSVNNATSSTPI--FGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKV 58

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           L  +  + KDWV++ T  R   DQM      LI  FGSYRLGVH  GADID++ V P ++
Sbjct: 59  LKNLDGLVKDWVQKTTISRIPKDQMFNAGGKLI-PFGSYRLGVHSSGADIDSIVVAPRHI 117

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
           +R  DFF    +ILA+  EVTEL  V  A VP+M  K+ G+ ID+L+A ++   V EDL+
Sbjct: 118 TRS-DFFNSFKDILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLN 176

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           I D S+L ++DE +VRSLNGCRVA+Q+LKLVP+ ++FC TLR +K WAK  G+YSN  GF
Sbjct: 177 ILDDSLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGF 236

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFS 295
            GG+ WA+LVAR+CQLYPNA PS L+ + F +++ W WP PV+L  I     D A+L   
Sbjct: 237 FGGITWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQL 296

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 355
           VWDPR+N  D+ H MPIITPA+P  NS++NVS S+++V+ D+ +    IC+++     +W
Sbjct: 297 VWDPRRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEW 356

Query: 356 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
             L E   FF  Y +++ + + A +  + LA+ G+ ESR+RQL  ++E++   ++     
Sbjct: 357 RDLLEEINFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQIN 415

Query: 416 PHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
           P ++ D   P     +F+GL     E V   +  D+   +++FK++I+
Sbjct: 416 PRKFKDVKDP-KKSIWFIGL-----EFVANVKNVDLTSDIQQFKMNID 457


>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
           antarctica T-34]
          Length = 672

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/442 (43%), Positives = 267/442 (60%), Gaps = 7/442 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  GVT PI+  GPT  +++  R L   L    ++ES EE + RE +LG++  + KD+
Sbjct: 16  PTRTLGVTPPIATNGPTPREIEVTRTLVAELERQRVFESDEESKVREVILGKLDAMVKDF 75

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           V  ++   G S+ +   A   IFTFGSYRLGVHGPG+DID LCV P +V RE DFF +  
Sbjct: 76  VYRVSIAHGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFFSVFE 134

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L E EEVTE+  V  AHVP++  KF G+ ID  +A ++   V ++L + D ++L  +D
Sbjct: 135 GMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRSLD 194

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E  VRSL G RV D IL+LVPN+  F   LRC+K WA+RR +YSNV GFLGGV WA+L A
Sbjct: 195 ERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTA 254

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R+CQLYPN     +VSRFF ++  W+WP PV+L  I++  L   VW+P+    D+ H MP
Sbjct: 255 RICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMP 314

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP M +++NVS ST  VM  +F+    + + V + K  WS LF  + F+  Y+ Y
Sbjct: 315 IITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWSELFAKHDFYFKYKYY 374

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPYPHEYVDTSKPCAHC- 429
           LQV   + +AD  L W G VES++RQL + +E      + C HP+   + D    C +  
Sbjct: 375 LQVIASSGSADLQLKWHGTVESKIRQLVMKLE--LVPTITCAHPFIKGF-DQVSECHNDN 431

Query: 430 -AFFMGLQRKPGEVVQEGQQFD 450
               +     P EV Q  Q+ D
Sbjct: 432 EVRLVATGDIPDEVAQRTQKVD 453


>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
          Length = 610

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/596 (37%), Positives = 326/596 (54%), Gaps = 45/596 (7%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P   GVT PIS AGP++ + +    L + L +   +ES+EE   RE VLGR+  + + +V
Sbjct: 8   PTYLGVTPPISTAGPSKREEEVTVTLMQELRDQNRFESEEEARTREIVLGRVSALVRKFV 67

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            +++  RG S+   + A   IFT+GSYRLGVHGPG+DID LCV P +V+RE DFF +   
Sbjct: 68  YKVSIARGMSETAAQAAGGKIFTYGSYRLGVHGPGSDIDTLCVVPKHVNRE-DFFDVFEP 126

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L E+E V E+  V +A+VP++K K   + +DL++A ++   V +DLD+SD ++L ++DE
Sbjct: 127 MLRELEGVAEVSGVPEAYVPIIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILRNLDE 186

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRSL G R+ D+IL+LVPN   F   LRC+K WA+RR +YSNV GFLGGV WA+LVAR
Sbjct: 187 RCVRSLGGSRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 246

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +CQLYPNA   ++VSRFF +   W+WPNPV+L  I+E  L   VW+P+    D+ H MPI
Sbjct: 247 ICQLYPNANAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPI 306

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITP YP M S++NVS ST  ++  + +  + I + + +  A WS LF  + FF  YR YL
Sbjct: 307 ITPNYPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFFHKYRYYL 366

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------- 417
           QV     NAD  L W G VESRLRQL + +E      +  HP+                 
Sbjct: 367 QVIASTENADLQLKWAGTVESRLRQLVMKLEY-VDSLVLAHPFIKGFDQTHYLLTEEEVR 425

Query: 418 -------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEE 457
                              E  D ++      F++GL  +P +    G ++ DI     E
Sbjct: 426 FVAQGFVSDVISKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGPRKLDISYPTAE 485

Query: 458 FKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT 516
           F   + M+  F    M I V HI+   +P YVF    ++ +  +L   + S    N    
Sbjct: 486 FTKLVKMWENFDDSKMGIVVRHIKSTMLPDYVFDPSERQPKQ-QLKRTKSSKSTSNNADA 544

Query: 517 GSGLKRKKDPESVD-QDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIP 571
              +  KK   S++  + P    ++S     +L P  LA  +  S + S   P+ P
Sbjct: 545 SPDMPNKKRRSSLNMSETPRSESALS-----ALPPSPLADLNATSRSPSVKSPINP 595


>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
 gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
          Length = 649

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/559 (37%), Positives = 311/559 (55%), Gaps = 40/559 (7%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PK  G+T PIS++ PTEA+      + + L   G++ES E+ ++RE  L RI  + K +V
Sbjct: 7   PKYLGITDPISVSPPTEAEEAATVAMMEELHRQGVFESAEDSKRRELALDRISALTKKFV 66

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           +++T  RG S+    +A   ++TFGSYRLGVH P +DID LCV P +VSRE DFF +   
Sbjct: 67  QKVTIARGLSEVTARNAGGKVYTFGSYRLGVHTPESDIDTLCVVPKHVSRE-DFFDVFEP 125

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +L E  +VTE+  + +A+VP++K K  G+ ID+L A ++   + EDL + D ++L ++D+
Sbjct: 126 MLRESPDVTEVAGIPEAYVPIIKIKMFGIPIDILMARLALSSIPEDLSLQDSNILRNLDD 185

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRSLNG RV D++L+LVPNV+ F   LRC+K WA+R+ +YSNV GF GGV WA+LVAR
Sbjct: 186 RCVRSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGVAWAMLVAR 245

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           VCQLYPNA    +V RFF +   W WP PV+L  +D+ ++G   W+P+    D+ H MP+
Sbjct: 246 VCQLYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPV 305

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITP YP M +++NVS ST  ++ ++ + G  +   + L  ++WS LFE + FF  YR +L
Sbjct: 306 ITPVYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFEKHDFFHKYRYFL 365

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------------- 417
           Q+    A+A+  L W   VE+++RQL   +E      L  HP+                 
Sbjct: 366 QIIASTASAEAQLMWAPNVEAKIRQLVSKLELVESLTL-AHPFTKGFEQVFYCMNDDEIR 424

Query: 418 -------------------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEE 457
                              E V++        F++GL  +P  V   G ++ DI     E
Sbjct: 425 SVAQGEVPDVIARRRPQDIEGVESGSKVYSTTFYIGLAIEPRPVGAIGTRRLDISYPTTE 484

Query: 458 FKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE--NGNEY 514
           F     M+  F +  M + V HI+   +P YVF  G ++ R  +   + RSS   N N Y
Sbjct: 485 FTKVAKMWERFDEATMGLVVRHIKSSALPDYVFEPGERQPRSAQKRVKVRSSYPVNENSY 544

Query: 515 QTGSGLKRKKDPESVDQDG 533
            T   L    + E    +G
Sbjct: 545 PTNGELSYATNGERSYTNG 563


>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 671

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/521 (39%), Positives = 300/521 (57%), Gaps = 39/521 (7%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P + YGVT  IS+   T+ + Q    L + L    ++ES EE   RE VLGR+  + K +
Sbjct: 12  PSRTYGVTGAISLQPATKPEQQLTVSLMEELKRRNIFESPEEARAREIVLGRLDVLVKQF 71

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           V  ++   G S+ +  D+   IFTFGSYRLGVHGPGADID LCV P +++RE  FF +L 
Sbjct: 72  VINVSISLGMSEAVARDSGGKIFTFGSYRLGVHGPGADIDTLCVVPRHITREH-FFEVLP 130

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L +  EVTEL  V +A VP++K KF  + +DLL+A ++   + + L++ D ++L ++D
Sbjct: 131 AMLNDRPEVTELATVPEAFVPIIKLKFSSIEVDLLFARLALPSIPDSLELIDDALLKNLD 190

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           +  VRSL G RV D+IL+LVP+V  F  +LR +K WAK R VYSNV GF GGV WA+ VA
Sbjct: 191 DRCVRSLGGSRVTDEILRLVPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAMCVA 250

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG--FSVWDPRKNRRDKTHH 309
           RVCQLYPN     +V+RFF V + W WP+PV+L  I     G    +W+P+   +D+ H 
Sbjct: 251 RVCQLYPNKPAGTIVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDRGHR 310

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYPCM S++N++ ST ++MM +F+ G  + +E+      W+ALF+ + FF  YR
Sbjct: 311 MPIITPAYPCMCSTHNITKSTAQIMMTEFKRGLAVTDEIATGTKPWAALFDKHDFFTRYR 370

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMI----------------ERDTY------ 407
            YLQ+   + NA+  L W G VE+RLRQL + +                ER++Y      
Sbjct: 371 YYLQITASSPNAEIQLKWAGTVEARLRQLVMKVEEVETVDLAHPFIKGFERESYYLTSDE 430

Query: 408 -GKLQCHPYPH----------EYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSV 455
              +Q    P           E  + S      +FF+GL  +P      G ++ DI   V
Sbjct: 431 VRAIQVGDVPPDVKGRTLADIEGKEGSGAVYTSSFFIGLLVQPKPAGHTGPRKLDISYPV 490

Query: 456 EEFKLSINMYM-FWKPGMEICVSHIRRKQIPPYVFPEGYKR 495
            EF   +  +  + +  M I V +I+  Q+P YVF +G +R
Sbjct: 491 GEFTRMVKQWEGYAEDSMGIIVRYIKGAQLPDYVF-DGEQR 530


>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
 gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
           Full=Polynucleotide adenylyltransferase
 gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
 gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
          Length = 566

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/390 (46%), Positives = 260/390 (66%), Gaps = 1/390 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+G+T PIS A  TE +   N  L   L    L+ES  E EKR +VL  ++QI  ++VK
Sbjct: 4   KQWGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVK 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +  +++M  +A   IFT+GSYRLGV+GPG+DID L V P +VSR+ +FF  L  +
Sbjct: 64  KVSLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRD-NFFQDLEPM 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E EEVT+L  V DA+VP++KFKF G+SIDL++A +S   V  DL++SD ++L  V+E 
Sbjct: 123 LREREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEER 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            V SLNG RV DQIL+LVPN   F   LR +KFWA+RR +Y+NV GF GGV WA++VAR+
Sbjct: 183 CVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S++V++FFR+   W WP P++L  I++  L   +W+P+    DK H MPII
Sbjct: 243 CQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPII 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST  +++ +      I +++ +    WSALF+ + FF  Y++YL 
Sbjct: 303 TPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLT 362

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           +   A  A+  L W G VES+LR L   +E
Sbjct: 363 ITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392


>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
 gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
          Length = 518

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/405 (47%), Positives = 267/405 (65%), Gaps = 7/405 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +QYG+T+PIS A PT  ++  N EL + L   G +ES+ E  KR++VL  ++Q+A+++V+
Sbjct: 3   EQYGITEPISTAPPTPEEIALNGELIEELKRQGSFESEAESNKRKKVLLIMQQLAQEYVR 62

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  + +SD M  DA   IFTFGSY LGVHGPG+DID L V P +V+RE DFF +   +
Sbjct: 63  QVSLKKNFSDGMARDAGGKIFTFGSYSLGVHGPGSDIDTLIVVPKHVTRE-DFFEVFERL 121

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  E+ E+  V DA VP++K KF G+SIDL+ A +    V  DL + D ++L +VD+ 
Sbjct: 122 LRERPELEEISAVPDAFVPIIKVKFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDDK 181

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D IL+LVPN   F   LR +K WA+ R VY N+ GF GGV W +LVARV
Sbjct: 182 DLRALNGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVARV 241

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV ++++SRFF V   WRWP PV+L  I++  L   VW+PR   +DK H MPII
Sbjct: 242 CQLYPNAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPII 301

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ + + G  I  E+ L +  WSALFE + FF  Y+ YL 
Sbjct: 302 TPAYPSMCATHNITASTQKVILRELERGGQILNEIMLGQKPWSALFEKHHFFSDYKYYLS 361

Query: 374 VDIVAAN---ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
             IVAA+   A+  L W G+VES+LR L   +E     +L  HPY
Sbjct: 362 --IVAASKGTAEQQLKWSGFVESKLRHLVQKLELLDSIEL-AHPY 403


>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
 gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
          Length = 594

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/404 (45%), Positives = 268/404 (66%), Gaps = 5/404 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT PIS AGPT A+ Q N  L + L +   +ES+E+ +KR +VL  ++ +A+++V 
Sbjct: 5   KTYGVTGPISTAGPTAAENQLNDALIQELKKEKSFESEEDTKKRVEVLRILQNLAQEFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++++ R  SD M +DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +   I
Sbjct: 65  QVSKKRNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDQI 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    E+ E+ PV DA VP++K KF G+SIDL+ A +    V  +L ++D ++L ++DE 
Sbjct: 124 LRTRSELEEIAPVPDAFVPIIKIKFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + T W WP PV+L  I++  L   VW+PR   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+S ST +V++ + + G  I  E+  NK  WS LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNISESTKKVILAELERGAQISSEIFSNKKTWSDLFQKHDFFYKYKFYLT 363

Query: 374 V-DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ-CHPY 415
           V    + +++  L W G VES+LR L   +E  T G +   HP+
Sbjct: 364 VMASTSGSSEQHLKWSGLVESKLRLLVQKLE--TLGGINLAHPF 405


>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
 gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
          Length = 563

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/402 (46%), Positives = 262/402 (65%), Gaps = 2/402 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+G+T PIS A PTE +   N  L   L    L+ES ++ EKR +VL  ++ I  ++V+
Sbjct: 4   KQWGITPPISTAPPTEKENALNTALVNELKAQNLFESAQDSEKRVRVLQELQAITTEFVR 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +  S++M  ++   IFT+GSYRLGV+GPG+DID L V P +VSRE +FF  L  +
Sbjct: 64  KVSLSKHMSEKMASESGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRE-NFFQDLEPM 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    E+T+L  V +A+VP++KFKF G+SIDL++A +S   V  DL++SD ++L  V+E 
Sbjct: 123 LRARPEITDLAAVPEAYVPIIKFKFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEER 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            + SLNG RV DQIL+LVPN   F   LR +KFWA+RR +Y+NV GF GGV WA++VAR+
Sbjct: 183 CILSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++VS+FFR+ + W WP PV+L  ID+  L   VW+P+    DK H MPII
Sbjct: 243 CQLYPNAVSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPII 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST  V++ +      I +++   K  WSALFE + FF  YR YL 
Sbjct: 303 TPAYPSMCATHNITPSTQTVILREMARAGLIVDDIMAGKKPWSALFEKHDFFHRYRYYLT 362

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           V   +  AD  L W G VES+LR     +E      L  HP+
Sbjct: 363 VTAASKTADSQLKWSGLVESKLRHFVTRLELVDAITL-AHPF 403


>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 582

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/537 (40%), Positives = 299/537 (55%), Gaps = 47/537 (8%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS+   T  + +    L + L +    E +EE   RE VLGR+  + K  V E++
Sbjct: 9   GVTAPISVMESTTREKEVTITLLEELKKQKTIEGEEEARTREIVLGRVAALVKKCVHEIS 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
              G S+     A   IFTFGSYRLGVHGPG+DID LCV P +VSREE +F +    L E
Sbjct: 69  LANGLSESAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREE-WFDVFERRLRE 127

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
           M+ VTE+  V +A VPV+K K  G+ ID   A ++   + EDLD+SD ++L ++DE  VR
Sbjct: 128 MDGVTEVSGVPEAFVPVIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLLRNLDERCVR 187

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RV D IL+LVP V  F   LRC+K WA R+ +YSNV GFLGGV WA+LVARVCQL
Sbjct: 188 SLNGSRVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAMLVARVCQL 247

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA    +VSRFF +   W+WP PV+L  I+E  L   VW+P+    D+ H MPIITPA
Sbjct: 248 YPNACAGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPIITPA 307

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++NV  ST  ++ ++ + G+ + E++ +  A WS LF  + FF+ YR YLQV  
Sbjct: 308 YPAMCATHNVMASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKYRYYLQVIA 367

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC------- 429
              NAD  L W G VESR+RQL + +E      +      H ++   +  ++C       
Sbjct: 368 STGNADLQLKWSGTVESRIRQLVMKLEY-----VDSLTLAHPFIKGFEQVSYCLSDEEVR 422

Query: 430 -------------------------------AFFMGLQRKPGEVVQEG-QQFDIRGSVEE 457
                                           F++GL  +P +    G ++ DI     E
Sbjct: 423 AVAQGEISETVKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPRKLDISYPTTE 482

Query: 458 FKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR-HPRLASQQRSSENGN 512
           F   + M+  F +  M I V HIR   +P YVF EG ++TR   R  + + S ++GN
Sbjct: 483 FTKLVKMWEKFDEAKMGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSKNSGQSGN 539


>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
          Length = 556

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/410 (44%), Positives = 266/410 (64%), Gaps = 3/410 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT PIS A PT  +   N  L + L   G +E++   +KR +VL   +++ +++V 
Sbjct: 4   KAYGVTDPISTANPTPRENSLNDSLIQELKNRGSFENESATKKRAEVLALFQKMVQEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +DA   +FTFGSYRLGV+GPG+DID L V P +V+RE DFF +   I
Sbjct: 64  TVSKSKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFTVFEQI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA VP++K +FDG+SIDL+ A ++   V  D+ + D ++L ++DE 
Sbjct: 123 IRKRPELQEIASVPDAFVPIIKIEFDGISIDLILARLNVPRVPLDMTLDDKNLLKNIDER 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA++R VY NV GF GGV WA+LVAR+
Sbjct: 183 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +YT W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V+M +   G  +  ++ L K+ WSAL E + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQKVIMSELARGAEVMNQINLGKSSWSALLERHDFFHKYKFYLC 362

Query: 374 VDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           +     ++D + L W G VES+LR L L +E  T G    HPY  ++ D+
Sbjct: 363 IVAATTSSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSDS 411


>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
           putative [Candida dubliniensis CD36]
 gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
          Length = 558

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/412 (44%), Positives = 274/412 (66%), Gaps = 7/412 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT+PIS  GPT  +   N  L + L   G +ES++  +KR +VL   +Q+ +++V 
Sbjct: 4   KTYGVTEPISTNGPTPKENILNDTLIQELKNRGSFESEQATKKRVEVLTLFQQLVQEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +DA   +FTFGSYRLGV+GPG+DID L V P +V+R+ DFF +  +I
Sbjct: 64  TVSKSKNMSDAMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFADI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA+VP++K +FDG+SIDL+ A ++   V  DL + D ++L ++DE 
Sbjct: 123 IRKRPELEEIACVPDAYVPIIKIEFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA++R VY N+ GF GGV WA+LVAR+
Sbjct: 183 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S++V +FF +YT W WP PV+L +I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V++ +   G++I +++   K  WS LFE + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLC 362

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           V  VAA   +A++   W G++ES+LRQL L +E    G    HPY  ++  T
Sbjct: 363 V--VAATIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSHT 411


>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
          Length = 408

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/386 (46%), Positives = 261/386 (67%), Gaps = 3/386 (0%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           G+T+P+S+  P E D++   EL+K LV+ GLY+SKE  ++RE VL  + ++ K +V+ + 
Sbjct: 12  GITEPLSLEKPKEHDIKLTDELQKTLVQYGLYDSKERAKQREYVLKSLDKMTKKFVQIVY 71

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +G+S Q    A   + T+GSYRLG +   ADID LCV P YVSR+ DFF I+ ++L  
Sbjct: 72  ERQGFSKQEAIQAGGKVLTYGSYRLGANAADADIDTLCVFPKYVSRK-DFFTIMLSLLRS 130

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            E++ ++ PV D++VPV+KFK++ + ID + A ++   V ED+D+SD  +L  +DE ++R
Sbjct: 131 NEQIKDITPVTDSYVPVIKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSIR 190

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RVAD IL+LVPN+E F T LRC+K WA R+ +YSN+ GFLGGV WA+LVARVCQL
Sbjct: 191 SLNGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQL 250

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRKNRRDKTHHMPIIT 314
           YP+A  S +V  FF++   W WP+PVML A+++         W+P+ N  D++H MPIIT
Sbjct: 251 YPHASASTVVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIIT 310

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           P+YP M S++NV  ST R++M + +    I +++    A W+ LF+ + FFE Y  YLQ+
Sbjct: 311 PSYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHNFFEIYMQYLQI 370

Query: 375 DIVAANADDLLAWKGWVESRLRQLTL 400
            +VA N +  L W G VE+RLRQL L
Sbjct: 371 TVVADNYNLQLKWAGLVEARLRQLLL 396


>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
          Length = 558

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/412 (44%), Positives = 274/412 (66%), Gaps = 7/412 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT+PIS  GPT  +   N  L + L   G +ES++  +KR +VL   +++ +++V 
Sbjct: 4   KTYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +DA   +FTFGSYRLGV+GPG+DID L V P +V+R+ DFF +  +I
Sbjct: 64  TVSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFADI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA+VP++K +FDG+SIDL+ A ++   V  DL + D ++L ++DE 
Sbjct: 123 IRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA++R VY N+ GF GGV WA+LVAR+
Sbjct: 183 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S +V +FF +YT W WP PV+L +I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V++ +   G++I +E+   K  WS LFE + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLC 362

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           V  VAA   +A++   W G++ES+LRQL L +E    G    HPY  ++ +T
Sbjct: 363 V--VAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSNT 411


>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 572

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/403 (45%), Positives = 268/403 (66%), Gaps = 3/403 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S A PT A+ + N EL + L + G +ES++E  KR +VL   +Q+A+++V 
Sbjct: 5   KVYGITGPVSTASPTAAENKLNDELIQELKKEGSFESEQETAKRVKVLEIFQQLAQEFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +D+   +FTFGSYRLGVHGPG+DID L V P +V+RE DFF +   +
Sbjct: 65  RVSKSKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDEL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + +E+ E+ PV DA+VP++K KFDG+SIDL+ A +    V + L +SD ++L ++DE 
Sbjct: 124 LRKRKELEEIAPVPDAYVPIIKTKFDGISIDLICARLDVAQVPQTLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++ + W+WP PV+L  I++  L   VW+P+   +D+ H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F+ G  I   +  NKA W  LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKKVILKEFERGVEITNNIFSNKATWEDLFKRHTFFHDYKFYLT 363

Query: 374 VDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           V      N +  L W G VES++R L L +E    G    HPY
Sbjct: 364 VTASTKGNDEQHLKWSGLVESKVRLLILKLEA-LPGIKSAHPY 405


>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
 gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
           Full=Polynucleotide adenylyltransferase alpha
 gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
 gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
 gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
          Length = 558

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/412 (44%), Positives = 274/412 (66%), Gaps = 7/412 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT+PIS  GPT  +   N  L + L   G +ES++  +KR +VL   +++ +++V 
Sbjct: 4   KTYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +DA   +FTFGSYRLGV+GPG+DID L V P +V+R+ DFF +  +I
Sbjct: 64  TVSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFADI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA+VP++K +FDG+SIDL+ A ++   V  DL + D ++L ++DE 
Sbjct: 123 IRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA++R VY N+ GF GGV WA+LVAR+
Sbjct: 183 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S +V +FF +YT W WP PV+L +I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V++ +   G++I +E+   K  WS LFE + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLC 362

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           V  VAA   +A++   W G++ES+LRQL L +E    G    HPY  ++ +T
Sbjct: 363 V--VAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSNT 411


>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
          Length = 375

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/359 (50%), Positives = 251/359 (69%), Gaps = 1/359 (0%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L+  G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQRHYGITSPISLAAPKETDCLLTQKLIETLLPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H M
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLM 313

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           PIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y+
Sbjct: 314 PIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 372


>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 600

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/533 (39%), Positives = 300/533 (56%), Gaps = 43/533 (8%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P P   GVT PIS     E + +    L + L     +E++EE   RE VLGR+  + K 
Sbjct: 21  PFPSYLGVTPPISTMESNEREKEVTMTLMEELRRQNTFETEEEARTREIVLGRVAALVKK 80

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +V++++  +G S+Q    A   IFTFGSYRLGVHGPG+DID LCV P +VSRE DFF + 
Sbjct: 81  FVRQVSIAKGLSEQAANLAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFEVF 139

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
             +L ++E VTE+  V +A+VP++K K  G+ +D L A ++   + +DL + D ++L ++
Sbjct: 140 EPMLKDLEGVTEVSGVPEAYVPIVKTKISGIPLDFLMARLALSSIPDDLSLQDDNLLRNL 199

Query: 191 DEPTVRSL--NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           DE  VRSL   G RV D+IL+LVPNV+ F   LRC+K WA+RR +YSNV GFLGGV WAL
Sbjct: 200 DERCVRSLGATGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAL 259

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVAR+CQLYPNA+   +VSRFF +   W WP PV+L  I++  L   VW+P+    D++H
Sbjct: 260 LVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSH 319

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPAYP M S++NV+ ST  +M ++F+ G  I ++V +  A WS LF  + FF  Y
Sbjct: 320 RMPIITPAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSATWSELFAKHDFFHKY 379

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS----- 423
           R YLQV     NAD  + W G VESR+RQL + +E      +  HP+   +   S     
Sbjct: 380 RYYLQVIASTGNADLQIKWSGTVESRIRQLVMKLEY-VDSLILAHPFIRGFEQVSYCLSE 438

Query: 424 -----------------------------KPCAHCAFFMGLQRKPGEVVQEG-QQFDIRG 453
                                         P     F++GL  +P      G ++ DI  
Sbjct: 439 DEVRAVAEGEISDSVAGRKKEDIEGKEGAGPVYSTTFYIGLAIEPKPTGATGPRRLDISY 498

Query: 454 SVEEFKLSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 505
              +F   + M+  + +  M I V HI+   +P  VF  G    R P+L  ++
Sbjct: 499 PTTDFTKLVKMWEKYDEATMGIVVRHIKSSGLPDNVFEPG---ERPPKLVQKR 548


>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
 gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
          Length = 555

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/403 (44%), Positives = 267/403 (66%), Gaps = 3/403 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S A PT A+ + N EL + L + G +ES++E   R +VL  ++++ +D+V 
Sbjct: 5   KVYGITGPVSTAAPTAAENKLNDELIQELKKEGSFESEQETNNRVKVLEILQKLTQDFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++ + +  SD M +DA   +FTFGSYRLGVHGPG+DID L V P YV+RE DFF +    
Sbjct: 65  KVYKNKNMSDGMAKDAGGKVFTFGSYRLGVHGPGSDIDTLVVVPKYVTRE-DFFTVFDQS 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA+VP++K KF G+SIDL+ A +    V  +L ++D ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAYVPIIKIKFSGISIDLICAKLDIAQVPINLQLNDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++ + W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F+ G  I  ++  NK  W+ LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKKVILKEFERGMKITNDIFSNKLTWNDLFKKHTFFYDYKFYLT 363

Query: 374 VDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           +       D D L W G VES++R L L +E    G    HPY
Sbjct: 364 ITTATKGTDEDHLKWSGLVESKVRLLILKLEA-LPGITLTHPY 405


>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
 gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
          Length = 923

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/487 (40%), Positives = 291/487 (59%), Gaps = 31/487 (6%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +QYG+T PISMA PTE D++++ ELE+ L E GL+ES  E   R +VL ++  + + W++
Sbjct: 207 EQYGITAPISMADPTELDLRQSEELERVLHEYGLFESDAELTHRMEVLRKVNLLFRQWIR 266

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +L+  R     + +     IFTFGSYRLGVH  GADID LCV P ++ R EDFF    ++
Sbjct: 267 DLSIQRNMPPDVADSVGGKIFTFGSYRLGVHTRGADIDTLCVAPRHILR-EDFFTSFKDL 325

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    EV+E +P+ +A VPV+K KFDG+ +D+++A ++   V E+  + D  +L ++D  
Sbjct: 326 LKSQPEVSECRPIEEAFVPVIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDVK 385

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKR-RGVYSNVTGFLGGVNWALLVAR 252
            +RSLNGCRV D+IL LVPN E F  TLR +KFWAKR +GVYSNV GFLGGV+WA+LVAR
Sbjct: 386 CIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVAR 445

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML----CAIDEAELGFS--VWDPRKNRRDK 306
            CQLYP A P++LV++         WP PV+L     + +   +GF   +WDPR  + D+
Sbjct: 446 TCQLYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDR 497

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MPIITPA+P  NS++NVS++T  ++      G  +  EV      W  LFEP  FF 
Sbjct: 498 YHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVICKGLSWPKLFEPSNFFV 557

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--VDTSK 424
            Y++Y+ +   AA   DL+ W G VES++R L    E +T G L  H  P ++  ++   
Sbjct: 558 KYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNT-GVLLAHVNPEQFSPLEEHG 616

Query: 425 PCAHCAFFMGLQRKPGEVVQEG---QQFDIRGSVEEFKLSINMYMF----WKPGMEICVS 477
                 + +GL     E+ +EG   +  D+   ++ F  SI         W+ GM++   
Sbjct: 617 DGVESFWVVGL-----EMNKEGIGAKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAK 671

Query: 478 HIRRKQI 484
           + RR+++
Sbjct: 672 YRRRREL 678


>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
 gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
          Length = 567

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/403 (45%), Positives = 266/403 (66%), Gaps = 3/403 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S AGPT A+ + N EL + L + G +ES++E   R +VL  ++++A+++V 
Sbjct: 5   KVYGITGPVSTAGPTAAENKLNDELIQELKKEGSFESEQETANRIKVLKILQELAQEFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M  DA   IFTFGSYRLGVHGPG+DID L V P +V RE DFF +L  I
Sbjct: 65  RVSKKKNMSDGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVMRE-DFFTVLDEI 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    E+ E+ PV DA VP++K KF G+SIDL+ A +    + + L +SD ++L ++DE 
Sbjct: 124 LRSRPELEEIAPVPDAFVPIIKIKFSGISIDLICAKLDLAQIPQSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA RR +Y+NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++ + W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNATSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST RV++ + + G +I  ++  NK  WS LF  + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKRVILQELENGISITNDIFSNKKTWSDLFTKHNFFYKYKFYLT 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           V       D+  L W G VES++R L L +E     KL  HP+
Sbjct: 364 VMASTRGTDEENLKWSGMVESKVRLLVLKLEALPGIKL-AHPF 405


>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
 gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
 gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
          Length = 598

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/410 (45%), Positives = 265/410 (64%), Gaps = 3/410 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT PIS  GPT A+ + N EL + L + G +ES+EE  KR +VL  ++ +A+++V 
Sbjct: 5   KVYGVTGPISKEGPTAAENKLNDELIQELKKEGTFESEEETAKRIKVLEELQALAQEFVF 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++R R  S+ M  DA   IFTFGSYRLGVHGPG+DID L V P +V+R+ DFF +   +
Sbjct: 65  KVSRKRNMSEGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVTRD-DFFTVFDEL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    E+ E+ PV +A VP++K K+ G+SIDL+ A +    V  +L +SD ++L ++DE 
Sbjct: 124 LRARPELDEIAPVPEAFVPIIKIKYSGISIDLICARLDIPQVPLNLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++V+RFF + T W WP PV+L  I++  L   VW+P+    D+ H MP+I
Sbjct: 244 CQLYPNACSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M S++N+  ST +V++++ Q G  +  ++  NK  W  LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCSTHNICESTKKVILNELQRGVEVTTDIFTNKKTWGDLFQKHDFFYKYKFYLT 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           V      +D+  L W G VES+LR L L +E  + G    HPY   +  T
Sbjct: 364 VMASTKGSDEQHLKWSGLVESKLRLLVLKLEVLS-GINLAHPYTKPFEST 412


>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
 gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
          Length = 701

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 212/510 (41%), Positives = 296/510 (58%), Gaps = 40/510 (7%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P  +GVT P++M  P +AD+ R+ EL   L    LYE+   +  RE+VL  + +I  +WV
Sbjct: 113 PYLFGVTNPVNMKLPQDADIHRSNELISVLRALNLYETAAGNLLRERVLNELNRIVVEWV 172

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            E+   +G  +Q    A   IFTFGSYRLGV  PG+DID LCV P +V+RE  FF ILH 
Sbjct: 173 VEVGMEQGLDEQEARQAGGKIFTFGSYRLGVTTPGSDIDTLCVTPRHVTREA-FFKILHA 231

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD-ISDMSVLNDVD 191
            L +   V++L PV DA+ PV+KF FDG+ IDLL+A +   V+    + + +  VL  VD
Sbjct: 232 KLQQDARVSKLTPVPDAYTPVLKFNFDGVEIDLLFARLPLPVIPSSWNSLENDFVLRHVD 291

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E T RS+NG RVAD +LKLVPN E F  TLR +K WAK RG+YSNV G+LGG++WA+LVA
Sbjct: 292 EKTARSVNGSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGISWAILVA 351

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAEL----GFSVWDPRKNRRDK 306
           R CQLYPN  PS L+ RFF VY++W+W N PV+LC I E  +     F +W+P+ N +D+
Sbjct: 352 RCCQLYPNFAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDR 411

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPY 362
            H +PIITPA+P MNS++NVS ST RV+ D+F     I +    + E++  +   L    
Sbjct: 412 HHLLPIITPAFPSMNSTHNVSLSTKRVITDEFANAKRIFDVWDKKKEISWTEALHLVLKP 471

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP------ 416
           L F S++++L++ I A N      W GWVES++R L   +ER       C P+       
Sbjct: 472 LDFTSFKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLERLA----ACPPFAAGGHTP 527

Query: 417 -HEYVDTSKPCAHCAFFMGLQRKPG-----------EVVQEGQQFDIRGSVEEFKLSINM 464
             E   T +P   C F     ++PG              Q+    D+R +  EF   IN 
Sbjct: 528 KSEAAMTVRPIP-CTFSF---QEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQ 583

Query: 465 Y---MFWKPGMEICVSHIRRKQIPPYVFPE 491
           +      +  +++ V H+RR Q+P YV  +
Sbjct: 584 WPERAQLEGQIQLRVKHVRRSQLPAYVLKQ 613


>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
 gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
          Length = 512

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 196/501 (39%), Positives = 297/501 (59%), Gaps = 24/501 (4%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV-K 73
           +YG+T P+S  GP+E+D +   EL KFLV   L+E+++   KRE+VL  + ++ + +V K
Sbjct: 12  RYGITDPVSTDGPSESDREDTAELMKFLVAQNLFETEDGKRKRERVLESLNRVLQQFVRK 71

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
              +  G  D      +A + TFGSYRLG+  P +DID LC+ P  V+RE  FF   +N 
Sbjct: 72  NAIKQLGIPDDEASKISAKLLTFGSYRLGIVAPNSDIDCLCLCPQSVTRES-FFTDFYNA 130

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L  +  +T+L  V DA+ PV+K  +DG+ IDLL+A++    V E++D+ D ++L +++E 
Sbjct: 131 LKLLPNITKLHAVPDAYTPVIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAILRNMNEA 190

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           T RS+NGCRVA  IL  VPN ++F TTLR +K WA RRG+Y+ V  ++GGV WA+L ARV
Sbjct: 191 TARSINGCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAWAILTARV 250

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTH 308
           CQLYPN +P+ L+ +FFRVY  W W  PVMLC I E       + F VWDPR N  D+ H
Sbjct: 251 CQLYPNFLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQH 310

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ----WSALFEPYLF 364
            MP+ITPA+P MNS++N++ +T R++ D+F+  N +  +V    AQ    W  + E    
Sbjct: 311 LMPVITPAFPSMNSTHNITLTTKRILTDEFKRANDLL-KVNAKGAQMKNIWERVLEKEDM 369

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EYVDT 422
           F S++++L ++++A        W+GW+ SR+R L   IE  T   +   P+P   +Y   
Sbjct: 370 FASHKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIE--TVPNILVRPWPEFFKYEHK 427

Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQ----QFDIRGSVEEFKLSINMYM---FWKPGMEIC 475
               A C FF    ++P       +     FD+R S++ FK  IN +     +K  + + 
Sbjct: 428 EWDYASCVFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQIAVN 487

Query: 476 VSHIRRKQIPPYVFPEGYKRT 496
           + +++  Q+P +V P   KRT
Sbjct: 488 IRYLKNSQLPHFVNPRR-KRT 507


>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
          Length = 601

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 177/407 (43%), Positives = 260/407 (63%), Gaps = 2/407 (0%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PK YG+T PIS   P E ++ + R+L   +    +YE+  E E RE+V  R+  + +DW+
Sbjct: 2   PKTYGLTGPISEDLPEEENLIQTRKLLDTMKSYNVYENNLEFEHRERVFRRLESLFRDWL 61

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           KE+       + + E     IF FGSY LGVH  GADIDALCVGP ++ R+  FF     
Sbjct: 62  KEICIEMNVPEVVTEKVGGKIFPFGSYHLGVHSKGADIDALCVGPGFLERKA-FFTSFFA 120

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
            L   +EV ++Q + +A+VPV+   ++G+ IDL++A +SR  V ++LD+ + S++ D+D 
Sbjct: 121 KLKAQKEVKDIQAIEEAYVPVITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDI 180

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRS NG RV +QIL+LVPNV +F   LR +K WAK+R +YSN  GFLGGV+WA++VAR
Sbjct: 181 RCVRSFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVAR 240

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +CQ+YPNA  S LV +FF++++MW WP P+ L  +++       WDP+ N+ D+ H MPI
Sbjct: 241 ICQVYPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPI 300

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP  N+S NVS STL ++ ++   G+ IC+E+E  KA+WS LFE   FF+ Y++Y 
Sbjct: 301 ITPAYPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDFFQKYQHYA 360

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            ++      +  L W G VES++R L   +ER+    L  H +PH +
Sbjct: 361 VLEASYTTEEKCLEWVGLVESKIRLLVSTLERNELVSL-AHVHPHAF 406


>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
          Length = 598

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 180/407 (44%), Positives = 265/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +GVT PIS  GPT A+   N  L + L + G +E++EE  KR  VL   +++ +++V 
Sbjct: 5   KIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQEFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++++ +  SD M  DA   +FTFGSYRLGVHGPG+DID L V P +VSRE DFF +   +
Sbjct: 65  QVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRE-DFFTVFDAL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  E+ E+  V DA VP++K KF+G+SIDL++A +    V   L +SD ++L +VDE 
Sbjct: 124 LRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVPN   F   LR +K WAKRR VY+NV GF GGV WA+ V R+
Sbjct: 184 DLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVRI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  ++++S+FF++ + W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+S ST +V++ + Q G  + +++  N+  W  LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNELSWEDLFKKHDFFFKYKFYLT 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           V +    +D+  L W G+VES+LR L   +E    G    HP+   Y
Sbjct: 364 VMVSTKGSDEQHLKWSGFVESKLRLLVQKLEV-LPGINLAHPFIEPY 409


>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
          Length = 569

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 179/404 (44%), Positives = 265/404 (65%), Gaps = 5/404 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S+AGPT A+ + N EL + L +   +ES++E   R +VL  ++++ + +V 
Sbjct: 5   KVYGITGPVSIAGPTAAENKLNDELIQELKKENSFESEQETANRVKVLKTLQELTEKFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +   +
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDAL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E EE+ E+ PV DA VP++K KF G+SIDL+ A +    V+  L + D ++L ++DE 
Sbjct: 124 LREREELDEIAPVPDAFVPIIKLKFSGISIDLICAKLDIAQVKPSLTLDDKALLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR +Y+NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++ + W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST  V++ +   G  +  ++   K  W+ LF  + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKAVILKELNRGIQVTNDIFAYKKTWADLFTKHDFFFQYKYYLT 363

Query: 374 VDIVAANADD--LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           +   A   DD   L W G VES+LR LTL +E     KL  HP+
Sbjct: 364 I-TAATRGDDEEHLKWSGLVESKLRLLTLKLETIPGIKL-AHPF 405


>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
 gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
          Length = 486

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 197/457 (43%), Positives = 284/457 (62%), Gaps = 7/457 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           M SS    S PP K +GVT  IS AGP   D++  + LE+ L+  G++ES++E ++R  V
Sbjct: 1   MMSSSTAGSNPPQKSFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIV 60

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           L ++ ++ K+W+ E++  +   + + +     IFTFGS+RLGVH  GADID L V P ++
Sbjct: 61  LAKLNELVKEWIVEVSIKKNMPENVAKTVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHI 120

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF   +++L    +V EL+ V +A VPV+K  F  + +DLL+A ++   + ++LD
Sbjct: 121 DRA-DFFSSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLD 179

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D ++L ++D   VRSLNGCRV D+IL+ VPN+E F  TLR +K WAK+ GVYSNV GF
Sbjct: 180 LLDENLLKNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNVLGF 239

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVW 297
           LGGV+WA+LVAR CQLYPNA  S L+ +FF V++ W WPNPV+L  I    E +LGF +W
Sbjct: 240 LGGVSWAILVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIW 299

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
           DPR N  D+ H MPIITPAYP  N S++VS ST ++M D+F       E+V   KA W  
Sbjct: 300 DPRTNPGDRYHLMPIITPAYPQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKANWDI 359

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
           LF P  FF  Y++Y+ +   +   ++ L W G VES++R L   +E + Y KL  H  P 
Sbjct: 360 LFTPPNFFHKYKHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPK 418

Query: 418 EY--VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 452
            Y  +D+        +F+GL  +  E V     ++I+
Sbjct: 419 SYGPLDSEGEKHVTRWFIGLMCEKLENVNINLTYEIQ 455


>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
 gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
          Length = 407

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 184/399 (46%), Positives = 255/399 (63%), Gaps = 11/399 (2%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P    + +P++ + P+  D + + ELE+FL +AGLYE  E+   R++VLG   ++ + WV
Sbjct: 6   PNDVYLLRPLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYELTQTWV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF----F 128
           K + R +  +   VEDA A ++TFGSYRLGVHGPGAD+D L VGP YV R+ DFF     
Sbjct: 66  KGVCRKKNLN---VEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGSEKH 122

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
            L  +L++  ++T++QPV DA VP++  K+ G+ ID+LYAS++   + E LD+S+ +VL 
Sbjct: 123 CLEYMLSQTPDITDIQPVPDAFVPMIGIKYKGVQIDILYASLAMQTLPEQLDLSNHAVLR 182

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
             DEPTVR+LNGCRV D +LKLVP  E F T LR +K WA  RG+ SNVTG+LGGVN A+
Sbjct: 183 GCDEPTVRALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGVNLAI 242

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           +VA++CQLYP A  S ++ +FF +   W WP  + L   +E  LG  VWDPR   RD   
Sbjct: 243 MVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLA 302

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV----ELNKAQWSALFEPYLF 364
            MP+ITPAYP MNS YNV  STL VM ++F     +C            +WS LF P  F
Sbjct: 303 LMPVITPAYPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPF 362

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           F  +  Y+Q+++ A +  DL+ W GWV SR+R+L   +E
Sbjct: 363 FTQHSFYIQLEVSADSEGDLVLWDGWVSSRIRRLVRNLE 401


>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
 gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
          Length = 811

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 211/506 (41%), Positives = 291/506 (57%), Gaps = 32/506 (6%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P  +GVT P+++  P E D+ R+ EL   L    LYE+   + +RE+VL  + +I  DWV
Sbjct: 221 PYAFGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWV 280

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            E+   +G  +Q    A   IFTFGSYRLGV  PG+DID LCV P +VSR+  FF IL+ 
Sbjct: 281 VEVGMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYA 339

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD-ISDMSVLNDVD 191
            L +   V++L PV DA+ PV+KF FDG+ IDLL+A +   V+    + + +  VL  VD
Sbjct: 340 KLQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVD 399

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E T RS+NG RVAD ILKLVPN E F  TLR +K WAK RG+YSNV G+LGGV+WA+LVA
Sbjct: 400 EKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVA 459

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAE----LGFSVWDPRKNRRDK 306
           R CQLYPN  PS LV RFF VY++W W N PV+LC I E        F VW+P+ N +D+
Sbjct: 460 RCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDR 519

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPY 362
            H +PIITPA+P MNS++NVS ST RV+ ++F     I +    + E++  +   L    
Sbjct: 520 HHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKP 579

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG-------------- 408
           L F S++++L++ + A N      W GWVES++R L   +ER   G              
Sbjct: 580 LDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEA 639

Query: 409 KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY--- 465
            +   P P  +    +P   CA  M +        Q+    D+R +  EF   IN +   
Sbjct: 640 AMTVRPIPCTF-SFQEPGWECASSMLVAL---NFAQQPCVIDLRPAAGEFVDLINQWPER 695

Query: 466 MFWKPGMEICVSHIRRKQIPPYVFPE 491
                 +++ V H+RR Q+P YV  +
Sbjct: 696 AQLDGQIQLRVKHLRRSQLPAYVLKQ 721


>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
           alpha) [Scheffersomyces stipitis CBS 6054]
 gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
           alpha) [Scheffersomyces stipitis CBS 6054]
          Length = 556

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 176/410 (42%), Positives = 268/410 (65%), Gaps = 3/410 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS A PT  +   N  L   L   G +ES++  +KR +VL + +++ +++V 
Sbjct: 4   RTYGVTDPISTANPTPKENSLNDALIGELRSRGSFESEQATKKRVEVLTQFQKMVQEFVF 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +DA   +FTFGSYRLGV+GPG+D+D L V P +VSRE DFF +   I
Sbjct: 64  TVSKKKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDLDTLVVVPQHVSRE-DFFTVFAEI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+ PV DA VP++K ++DG+ +DL++A ++   +  D+ + D ++L ++DE 
Sbjct: 123 IRKRPELEEIVPVPDAFVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDER 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA+++ VY NV GF GGV WA+LVAR+
Sbjct: 183 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +YT W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL- 372
           TPAYP M +++N+++ST +V++ + + G  +  ++ L K  WS LF+ + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDFFHHYKFYLC 362

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
            V    A+ ++ L W G +ES+LR L L +E  T G    HPY  ++ D+
Sbjct: 363 VVAATVASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSDS 411


>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 685

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 209/555 (37%), Positives = 299/555 (53%), Gaps = 25/555 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T  IS+A P E D    ++L   +   G++E +EE                    
Sbjct: 16  KHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHXXXXXXXXXXXXXXXXX 75

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
                                            GADIDALCV P +V R  DFF      
Sbjct: 76  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGADIDALCVAPRHVERT-DFFQSFFEK 134

Query: 134 LAEMEEVTELQPVL---DAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L + EE+ +L+  L   DA VPV+KFKFDG+ IDLL+A ++   + ++LD+   S+L ++
Sbjct: 135 LKQHEEIKDLRVCLCVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNL 194

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LV
Sbjct: 195 DIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLV 254

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR CQLYPNAV + LV +FF V++ W WPNPV+L   +++ L   VWDPR N  D+ H M
Sbjct: 255 ARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLM 314

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPAYP  NS+YNVSTST  +M ++F+YG ++ +E+   KA+WS LFEP  FF+ Y++
Sbjct: 315 PIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKH 374

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 430
           Y+ +   A+  ++ L W G VES++R L   +ER+ Y  L  H  P  +  + +      
Sbjct: 375 YIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENE 433

Query: 431 F----FMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQ 483
           F    F+G+  K     E V     +DI+   +      N     K GM+I  +H+++KQ
Sbjct: 434 FVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQ 493

Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ-------------TGSGLKRKKDPESVD 530
           +  Y+ PE  ++ +   +A   RSS  G+  +             T +G      P  V 
Sbjct: 494 LNLYLPPELVQKKKRQSIADLNRSSNGGSSKRISLDSSHLDSSRDTDTGTPFSSPPCKVS 553

Query: 531 QDGPEKRQSISPQKQ 545
           +   +   S+SP K+
Sbjct: 554 KPASDTEDSVSPPKK 568


>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
          Length = 795

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 211/506 (41%), Positives = 291/506 (57%), Gaps = 32/506 (6%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P  +GVT P+++  P E D+ R+ EL   L    LYE+   + +RE+VL  + +I  DWV
Sbjct: 210 PYAFGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWV 269

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            E+   +G  +Q    A   IFTFGSYRLGV  PG+DID LCV P +VSR+  FF IL+ 
Sbjct: 270 VEVGMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYA 328

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD-ISDMSVLNDVD 191
            L +   V++L PV DA+ PV+KF FDG+ IDLL+A +   V+    + + +  VL  VD
Sbjct: 329 KLQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVD 388

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E T RS+NG RVAD ILKLVPN E F  TLR +K WAK RG+YSNV G+LGGV+WA+LVA
Sbjct: 389 EKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVA 448

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAE----LGFSVWDPRKNRRDK 306
           R CQLYPN  PS LV RFF VY++W W N PV+LC I E        F VW+P+ N +D+
Sbjct: 449 RCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDR 508

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPY 362
            H +PIITPA+P MNS++NVS ST RV+ ++F     I +    + E++  +   L    
Sbjct: 509 HHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKP 568

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG-------------- 408
           L F S++++L++ + A N      W GWVES++R L   +ER   G              
Sbjct: 569 LDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEA 628

Query: 409 KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY--- 465
            +   P P  +    +P   CA  M +        Q+    D+R +  EF   IN +   
Sbjct: 629 AMTVRPIPCTF-SFQEPGWECASSMLVALN---FAQQPCVIDLRPAAGEFVDLINQWPER 684

Query: 466 MFWKPGMEICVSHIRRKQIPPYVFPE 491
                 +++ V H+RR Q+P YV  +
Sbjct: 685 AQLDGQIQLRVKHLRRSQLPAYVLKQ 710


>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
          Length = 778

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 211/506 (41%), Positives = 291/506 (57%), Gaps = 32/506 (6%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P  +GVT P+++  P E D+ R+ EL   L    LYE+   + +RE+VL  + +I  DWV
Sbjct: 191 PYAFGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWV 250

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            E+   +G  +Q    A   IFTFGSYRLGV  PG+DID LCV P +VSR+  FF IL+ 
Sbjct: 251 VEVGMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYA 309

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD-ISDMSVLNDVD 191
            L +   V++L PV DA+ PV+KF FDG+ IDLL+A +   V+    + + +  VL  VD
Sbjct: 310 KLQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVD 369

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E T RS+NG RVAD ILKLVPN E F  TLR +K WAK RG+YSNV G+LGGV+WA+LVA
Sbjct: 370 EKTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVA 429

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDEAE----LGFSVWDPRKNRRDK 306
           R CQLYPN  PS LV RFF VY++W W N PV+LC I E        F VW+P+ N +D+
Sbjct: 430 RCCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDR 489

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE----EVELNKAQWSALFEPY 362
            H +PIITPA+P MNS++NVS ST RV+ ++F     I +    + E++  +   L    
Sbjct: 490 HHLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKP 549

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG-------------- 408
           L F S++++L++ + A N      W GWVES++R L   +ER   G              
Sbjct: 550 LDFTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEA 609

Query: 409 KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMY--- 465
            +   P P  +    +P   CA  M +        Q+    D+R +  EF   IN +   
Sbjct: 610 AMTVRPIPCTF-SFQEPGWECASSMLVALN---FAQQPCVIDLRPAAGEFVDLINQWPER 665

Query: 466 MFWKPGMEICVSHIRRKQIPPYVFPE 491
                 +++ V H+RR Q+P YV  +
Sbjct: 666 AQLDGQIQLRVKHLRRSQLPAYVLKQ 691


>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
          Length = 620

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 211/577 (36%), Positives = 320/577 (55%), Gaps = 53/577 (9%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           Q+G TKPIS   P E +++    L + L   G +ES+EE   REQVLGRI  + K +V++
Sbjct: 8   QWGTTKPISWNPPQEKEIKATERLMEELHHQGSFESEEEGRLREQVLGRIAGLVKQFVEK 67

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++   G+S++  + A A IFT GSYRLGVHGPG+DID +CV P +VSRE  FF +   +L
Sbjct: 68  VSVSFGFSEEAAKAAGAKIFTSGSYRLGVHGPGSDIDTICVVPKHVSREH-FFTVFEPML 126

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
             ME VTE+  V +A VPV+K    G+ +D L+A ++   + +DL++ D ++L ++DE  
Sbjct: 127 LNMEGVTEVSGVPEAFVPVIKAIVSGIHVDFLFARLNLTQIPDDLELKDDNLLRNLDERD 186

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           VRSL G RV D+IL+LVP    F   LR +K WA+RR +YSNV GFLGGV WA+LVAR+C
Sbjct: 187 VRSLGGSRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGVAWAMLVARIC 246

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QL+P    + ++SRFF +   W WP P++L AI++  L   VW+P+    D+TH MPIIT
Sbjct: 247 QLFPKYDAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMPIIT 306

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP M +++NV+ ST+++M ++ + G+ I E++      W+ LFE + FF  YR YLQ+
Sbjct: 307 PAYPSMCATHNVTHSTMKIMQNELRRGSQIVEKIIQAGEPWANLFEKHDFFHMYRYYLQI 366

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP------------------ 416
            I + N +    W G VES++R L   +E     ++  HP+                   
Sbjct: 367 IITSGNQEMYHKWAGTVESKIRLLVGKLELQEAVEI-AHPFTKGLDQVVCCLNDDEVRAV 425

Query: 417 ----------------HEYVDTSKPCAHCAFFMGLQRKPGEVVQEG-QQFDIRGSVEEFK 459
                           HE  D         F++GL  +P    Q G ++ DI     EF 
Sbjct: 426 AKYEMDDEVLKRSETEHEGKDGVSKVFMKTFYIGLGVEPKPAGQTGPRKLDISYPTIEFV 485

Query: 460 LSINMY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGS 518
            ++ ++ ++ +  M I + +++   +P   F  G ++    +   + +S       + G 
Sbjct: 486 KTVKLWDLYEEEQMGIVIRYVKHSALPDNCFEGGVRQALAGKGVKRTKS-------KAGD 538

Query: 519 GLK--RKKDPESVDQD-GPEKRQSISPQKQDSLSPDH 552
           G K   +  P  V  D  P K+     Q++DSL+ DH
Sbjct: 539 GKKPLSRTSPHDVSGDYSPHKK-----QRKDSLTGDH 570


>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 639

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 180/406 (44%), Positives = 266/406 (65%), Gaps = 2/406 (0%)

Query: 10  PPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAK 69
           P   +Q+GVT P+SMAGPTE ++  N  L   L     +ES EE +KR +VLG +++I  
Sbjct: 56  PLNERQWGVTPPVSMAGPTEHEIAVNAALIDELKLRKNFESPEESDKRAKVLGELQKITL 115

Query: 70  DWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI 129
           ++V++++  +  ++ M  DA   IFT+GSYRLGV+ PG+DID L V P +V+RE +FF  
Sbjct: 116 EFVQKVSLDKHMTESMARDAGGKIFTYGSYRLGVYSPGSDIDTLMVVPRHVTRE-NFFTD 174

Query: 130 LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLND 189
              IL    EVT +  V DA+VP++KFKF G+ IDL++A ++   V  DL + D ++L +
Sbjct: 175 FEQILRNRPEVTGITAVPDAYVPIIKFKFSGIPIDLIFARLALAQVPMDLTLEDNNLLKN 234

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           V+E  V SLNG RV D+IL+LVPN   F   LR +K WA++R +YSNV GF GGV WA+L
Sbjct: 235 VEERCVLSLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGVAWAML 294

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VAR+CQLYPNAV ++++++FFR+ + W+WP PV+L  I++  L   VW+P+  + D+ H 
Sbjct: 295 VARICQLYPNAVSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHR 354

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP M S++N++ ST +V++++      I +++      WS LF  + FF  Y+
Sbjct: 355 MPIITPAYPSMCSTHNITESTQKVIINEMNRAGDIADKILNGTLPWSTLFAKHTFFHQYK 414

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
            YL +   + +A+  L W G VES++RQL L +E     KL  HP+
Sbjct: 415 YYLVIVAASKSAEMQLKWSGLVESKVRQLVLRLEYVDEIKL-AHPF 459


>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
 gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
          Length = 485

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 203/486 (41%), Positives = 291/486 (59%), Gaps = 9/486 (1%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           M SS    S PP K +GVT  IS AGP   D++  + LE+ L+  G++ES++E ++R  V
Sbjct: 1   MMSSSTAGSNPPQKSFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIV 60

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           L ++ ++ K+W+ E++  +   + + +     IFTFGS+ LGVH  GAD   L V P ++
Sbjct: 61  LAKLNELVKEWIVEVSIKKKMPENVAKTVGGKIFTFGSFILGVHTKGAD--TLLVAPHHI 118

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF   +++L    +V EL+ V +A VPV+K  F  + +DLL+A ++   + ++LD
Sbjct: 119 DRA-DFFSSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLD 177

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           + D ++L ++D   VRSLNGCRV D+IL+ VPN+E F  TL  +K WAK+ GVYSNV GF
Sbjct: 178 LLDENLLKNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGF 237

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI---DEAELGFSVW 297
           LGGV+WA+LVAR CQLYPNA  S L+ +FF V++ W WPNPV+L  I    E +LGF  W
Sbjct: 238 LGGVSWAMLVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNW 297

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
           DPR N  D+ H MPIITPAYP  NS++NVS ST ++M D+F  G    E+V   KA W  
Sbjct: 298 DPRTNPGDRYHLMPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKANWDR 357

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
           LF P  FF  YR+Y+ +   +   ++ L W G VES++R L   +E + Y KL  H  P 
Sbjct: 358 LFTPPNFFHKYRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPK 416

Query: 418 EY--VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC 475
            Y  +D+        +F+GL  +  E V     ++I+    +        M +K GM   
Sbjct: 417 SYGPLDSEGEKHVTRWFIGLMFEKLENVNINLTYEIQMFKNKVHAQAVKIMMFKEGMVTE 476

Query: 476 VSHIRR 481
             H+RR
Sbjct: 477 AKHVRR 482


>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
          Length = 572

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 182/404 (45%), Positives = 266/404 (65%), Gaps = 5/404 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT PIS+AGPT A+   N +L + L + G +ES+ E +KR +VL  ++ +A ++V 
Sbjct: 5   KSYGVTPPISLAGPTPAENVLNDQLIQELKKQGNFESESETKKRIEVLQLLQNLATNFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++++ +  S+ M +DA   IFT+GSYRLGV+GPG+DID L V P +V+R+ DFF +   +
Sbjct: 65  KVSKNKNMSEGMAKDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVFDEL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    E+ E+ PV DA VP++K K  G+ IDL+YA +    V  +L + D ++L ++DE 
Sbjct: 124 LRTRSELEEIAPVPDAFVPIIKVKISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F  +LR +K WA+RR +Y+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRSLNGTRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S++VS+FF + T W WP PV+L  I++  L   VW+PR   +D+ H MP+I
Sbjct: 244 CQLYPNAVSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++++ Q G+ I  ++  +K QW  LF  + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITASTQKVILNELQRGSLIMNDIISHKKQWEDLFVKHDFFYKYKFYLN 363

Query: 374 VDIVAANADD--LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           + I     DD   L W G VES+LR L   +E +  G    HPY
Sbjct: 364 I-IAFTRGDDEQHLKWSGLVESKLRLLVQKLE-NFQGINLAHPY 405


>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
 gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
          Length = 512

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 190/493 (38%), Positives = 292/493 (59%), Gaps = 17/493 (3%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           QYG+T P+S  GPT  D++ +REL   L    LYE+ E  ++RE +L  + ++ + +V+ 
Sbjct: 12  QYGITDPVSNEGPTNNDIKASRELLNLLKSYNLYETDEGKKRREDILESLNRLLQQFVRR 71

Query: 75  LTRL-RGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
             ++ RG +DQ     +  + TFGSYRLG+  P +DID LC+ P  V+RE  FF   +N 
Sbjct: 72  QAKINRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNT 130

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L ++E +++LQPV DA+ PV+K  F  +SID+L+A++    V   +++ D ++L ++++ 
Sbjct: 131 LTKVEGISKLQPVPDAYTPVIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRS+NGCRVA  IL  VPN  +F TTLR +K WA RR +YS V G+LGGV WA+L ARV
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTH 308
           CQLYPN  P+ L+ +FFRV+++W+W  PV LC I E       + F VWDPR N +D+ H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL-NKAQWSALFEPYLFFES 367
            MPIITPA+P MNS++NV+ +T +V+ ++      I +   L N   W  + E    F +
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLELWEKVLEEQDVFSN 370

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP--HEYVDTSKP 425
           Y+++L +++  +       W+GW+ SR+R L   +E    G     P P   ++ D +  
Sbjct: 371 YKHFLVIEVYGSTEHAHGKWEGWIGSRMRFLISRLE--NLGNTHIRPIPGFFKFEDDNWD 428

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRK 482
            A  AFF   +   G V +  +  DIR +V+ FK  IN +     ++  +   + H++  
Sbjct: 429 YASSAFF-AFKVISG-VAENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLKNN 486

Query: 483 QIPPYVFPEGYKR 495
           Q+P YV     K+
Sbjct: 487 QLPDYVLSNKSKK 499


>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
 gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
          Length = 554

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 188/458 (41%), Positives = 283/458 (61%), Gaps = 14/458 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  + +GV++PIS A P   D++    L+K L +   YE +EE  +R +VL ++    K 
Sbjct: 14  PITRTFGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQ 73

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++++T  R   DQ+  +A   +  FGSYRLGVH  GADID L + P + +R  DFF   
Sbjct: 74  WIQKITEARYPKDQLF-NAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSF 131

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
             +LA+  EVT L  V +A VP+M  K+ G+ ID L+A ++   V EDLDI D ++L ++
Sbjct: 132 KQMLAKDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNL 191

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D+ +VRSLNGCRVA+ +LKLVPN E+FC TLR +K WAK  G+YSN  GF GG+ WA+LV
Sbjct: 192 DQESVRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILV 251

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRD 305
           AR CQLYPNA PS L+ + F +++ W+WP PV+L  I     D A+L   VWDPR+N+ D
Sbjct: 252 ARACQLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSD 311

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPI+TPA+P  NS++NVS S+++V+ ++ +     C+ ++     W  L E   FF
Sbjct: 312 RYHLMPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFF 371

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
             Y++++ + + A    D LA+ G+ ESR+RQL L++E++   KL  H  P ++     P
Sbjct: 372 SRYKHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDP 430

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
                +F+GLQ       +  +  D+   +++FK +I+
Sbjct: 431 -KKSVWFIGLQFD-----ENVKNLDLTKDIQQFKRNID 462


>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
 gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
          Length = 581

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 173/403 (42%), Positives = 269/403 (66%), Gaps = 3/403 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S+AGPT  + + N EL + L +   +E+++E   R +VL  ++ + + +V 
Sbjct: 5   KVYGITGPVSVAGPTAPENKLNDELIQELKKENSFETEQETANRVKVLETLQMLTEKFVF 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++++ +  SD M +DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +   +
Sbjct: 65  QVSKNKNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDAL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A +    V  +L +SD ++L ++DE 
Sbjct: 124 LRERDELDEIAPVPDAFVPIIKMKFSGISIDLICARLDIAQVPLNLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR +Y+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++ + W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++++F  G  +  ++  NK  W+ LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKKVILEEFARGIQVTNDIFSNKGTWADLFQKHDFFYKYKFYLT 363

Query: 374 VDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           + +    +D + L W G VES+ R L L +E     KL  HP+
Sbjct: 364 ITVSTKGSDEEHLKWSGLVESKTRLLVLKLEALAGIKL-AHPF 405


>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
          Length = 394

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 182/374 (48%), Positives = 255/374 (68%), Gaps = 7/374 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P + D    ++L + L   G++E ++E + R  +LG++  + K+W++
Sbjct: 15  KTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNLVKEWIR 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++ L+     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   +  
Sbjct: 75  EISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYEK 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN++ F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L KA+WS LF+   FF+ Y+ Y+ 
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK-YVF 372

Query: 374 VDIVAANADDLLAW 387
            +++A     + AW
Sbjct: 373 YNLLA-----MFAW 381


>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
 gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
          Length = 507

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 192/494 (38%), Positives = 294/494 (59%), Gaps = 18/494 (3%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           QYG+T P+S  GPT  D++ +REL   L    LYE++E  ++RE +L  + ++ + +V+ 
Sbjct: 12  QYGITDPVSHEGPTNNDLKASRELLNLLKSHNLYETEEGKKRREDILESLNRLLQQFVRR 71

Query: 75  LTRL-RGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
             ++ RG +DQ     +  + TFGSYRLG+  P +DID LC+ P  V+RE  FF   +N 
Sbjct: 72  QAKITRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNT 130

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +++ +++LQ V DA+ PV+K  F  +SID+L+A++    V   +++ D ++L ++++ 
Sbjct: 131 LNKVDGISKLQAVPDAYTPVIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRS+NGCRVA  IL  VPN  +F TTLR +K WA RR +YS V G+LGGV WA+L ARV
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTH 308
           CQLYPN  P+ L+ +FFRVY++W+W  PV LC I E       + F VWDPR N +D+ H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFES 367
            MPIITPA+P MNS++NV+ +T RV+ ++      I +   L   + W  + E    F +
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVELWEKVLEEEDVFSN 370

Query: 368 YRNYLQVDIVAANADDLL-AWKGWVESRLRQLTLMIERDTYGKLQCHPYP--HEYVDTSK 424
           Y+++L +++  +N       W+GW+ SR+R L   +E    G     P P   ++ D + 
Sbjct: 371 YKHFLVIEVYGSNEHVAHNKWEGWIGSRMRFLISRLE--NLGNTYIRPIPGFFKFEDDNW 428

Query: 425 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRR 481
             A  AFF   +   G VV+  +  DIR SV+ FK  IN +     ++  +   + H++ 
Sbjct: 429 DYASSAFF-AFKVISG-VVETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHLKN 486

Query: 482 KQIPPYVFPEGYKR 495
            Q+P YV     K+
Sbjct: 487 NQLPDYVLSNKSKK 500


>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
 gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
          Length = 655

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 192/481 (39%), Positives = 291/481 (60%), Gaps = 33/481 (6%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++E+  +P      GV++PIS+A P   D+ +   L + L + G YE KEE E+R +V
Sbjct: 1   MSATEKDKTP----LLGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEV 56

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           L  + ++ K+WVK +T ++  + + V +A   +FTFGSYRLGVH  GADID L V P ++
Sbjct: 57  LRNLNRLVKEWVKNVTAMKIPNGEGV-NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHI 115

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF     +L     VTEL  V +A VPVMK K+ G+ +D+L+A ++   V +  +
Sbjct: 116 DRS-DFFTSFKEMLNNDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQE 174

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           +SD ++L ++D+ +VRSLNGCRVA+Q+LKLVP  + FC TLR +K WAK  G+YSN  GF
Sbjct: 175 LSDDNLLRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGF 234

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFS 295
            GG+ WA+LVAR CQLYPNA PS LV R F +++ W WP+PV+L  +     D   L   
Sbjct: 235 FGGITWAILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCEL 294

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 355
           VWDPR+   D+ H MPIITPA+P  NS++NV+ ST  V+ ++      IC ++   K++W
Sbjct: 295 VWDPRRKNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKW 354

Query: 356 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           +ALFE   FF  Y++++ + + A N ++ L + G++ESR+R L   +ER+    +  H  
Sbjct: 355 TALFEEVNFFSRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERN-QDIIIAHND 413

Query: 416 PHEYVDTSKPCAHCAF------------FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
           P+++    KP  +  F            F+GL     E  +  +  D+   ++ FK ++ 
Sbjct: 414 PNKH----KPSPNAKFDVNPENKRVTVWFIGL-----EFAEHAKTLDLTNEIQRFKTNVE 464

Query: 464 M 464
           +
Sbjct: 465 L 465


>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
           nagariensis]
 gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
           nagariensis]
          Length = 410

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 184/394 (46%), Positives = 253/394 (64%), Gaps = 11/394 (2%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           + +P++ A PT  D + ++ELE+FL  +GLYES +E   RE+VLG   Q+ + WVK + R
Sbjct: 11  LLRPLNDAPPTAEDKRHSKELEEFLRASGLYESLDEAILREEVLGLFYQLVQIWVKGVCR 70

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF----FILHNI 133
            R  +   VEDA A ++TFGSYRLGVHGPG+D+D L VGP YV RE DFF      L  +
Sbjct: 71  RRNLN---VEDARAHVYTFGSYRLGVHGPGSDMDTLVVGPRYVLREMDFFGNEKHCLQYL 127

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L++  ++T++QPV DA VP++  K+ G+ ID+LYAS++ + + E LD+S+ +VL   DE 
Sbjct: 128 LSQTPDITDIQPVPDAFVPMIGIKYKGVQIDVLYASLAMVTLPEQLDLSNHAVLRGCDEA 187

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNGCRV D IL+LVPN + F   LR +K WA  RG+ SNVTG+LGGVN A++VA++
Sbjct: 188 TVRSLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGVNLAIMVAKI 247

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYP A  S ++ +FF +   W WP  + L   ++  +G  VWDPR   RD    MP+I
Sbjct: 248 CQLYPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVI 307

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA----QWSALFEPYLFFESYR 369
           TPAYP MNS YNV  STL VM  +F     +C      +      W  LF P  FF  + 
Sbjct: 308 TPAYPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQHT 367

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
            Y+Q+++ A +  DL+ W GWV SR+R+L   +E
Sbjct: 368 FYIQIEVSADSEQDLVLWDGWVSSRIRRLVRNLE 401


>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
 gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
          Length = 558

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 182/403 (45%), Positives = 259/403 (64%), Gaps = 7/403 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS A PT  +   N  L + L   G +ES+    KR +VL  ++++A+ +V E+
Sbjct: 6   YGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAEKFVYEV 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  +  SD M  DA   IFTFGSYRLGV+GPG+DIDAL V P +V+R  DFF +   IL 
Sbjct: 66  SLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTRN-DFFEVFEKILR 124

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           E +E+ E+  V DA+VP++K   +G+SIDL++A +    V +DL + D ++L ++DE  +
Sbjct: 125 ERKELEEIAAVPDAYVPIIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDL 184

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNG RV D+IL LVP    F   LRC+K WA++R +Y+NV GF GGV WA+LVAR+CQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV +++V +FF +Y  W WP PV+L  I++  L   VW+PR    D+ H MP+ITP
Sbjct: 245 LYPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITP 304

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N+++ST +++M +F+ G  I  ++  N   W+ L   + FF +Y+ YL   
Sbjct: 305 AYPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTFFHNYKFYLC-- 362

Query: 376 IVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           IVAA     ++ + W G VESRLR L   +E  T G    HPY
Sbjct: 363 IVAATKGSYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404


>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
          Length = 547

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 186/409 (45%), Positives = 261/409 (63%), Gaps = 7/409 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT PIS A PT  +   N  L   L   G +ES+   +KR +VL   + + +++V 
Sbjct: 3   KSYGVTGPISTADPTAKEFSLNESLIHELKGRGSFESESATKKRAEVLSLFQTLVQEFVY 62

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFTFGSYRLGV+GP +DIDAL V P +V+RE DFF     I
Sbjct: 63  EVSKSKNMSDGMSRDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDQI 121

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA VP++K +FDG+S+DL+ A ++   V  D+ + D ++L ++DE 
Sbjct: 122 IRKRPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDER 181

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA+ R VY NV GF GGV WA+L AR+
Sbjct: 182 DLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARI 241

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV S++V +FF +YT W WP PV+L AI++  L   VW+PR    D+ H MP+I
Sbjct: 242 CQLYPNAVSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVI 301

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V++ +   G ++ + +   +  WS LFE + FF  YR YL 
Sbjct: 302 TPAYPSMCATHNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNFFHRYRFYLC 361

Query: 374 VDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           V  VAA  D   +   W G+VES+LRQL L +E  T G    HPY  ++
Sbjct: 362 V--VAATVDSAEEHHKWHGFVESKLRQLVLKLE-STEGIEIAHPYVKDF 407


>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
 gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
          Length = 574

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 177/405 (43%), Positives = 267/405 (65%), Gaps = 7/405 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S  GPT A+ + N EL + L +   +E++ E EKR  +L  ++++ +++V 
Sbjct: 5   KIYGITGPVSTVGPTAAENKLNDELIQELKKENSFETELETEKRVNILKTLQKLTEEFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M  D+   +FTFGSYRLGVHGPG+DID L V P +VSR+ DFF I   +
Sbjct: 65  RVSKKKNMSDGMARDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFTIFAEL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   EE+ E+ PV DA VP++K +F G+SIDLL A +    +   L +SD ++L ++DE 
Sbjct: 124 LRGREEIEEIAPVPDAFVPIIKTQFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R++NG RV D+IL+LVP    F   LR +K WA RR +Y+NV GF GGV WA+LVAR+
Sbjct: 184 DLRAINGTRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++   W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F+ G  +  ++  NK  W+ LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITDSTKKVILQEFERGVQVTNDIFTNKKTWADLFKKHEFFHKYKFYLT 363

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           V  VA+   + +  L W G+VES+LR L L +E     KL  HPY
Sbjct: 364 V--VASTRGSTEQHLKWSGFVESKLRLLVLKLETLAGIKL-AHPY 405


>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
          Length = 700

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/504 (39%), Positives = 280/504 (55%), Gaps = 45/504 (8%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 4   MSANTVLDSQCQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 63

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG++  + K+W+ +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V
Sbjct: 64  LGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHV 123

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            R  DFF      L   + +  L+ V DA VPV+KF+FDG+ +                 
Sbjct: 124 ERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEVR---------------- 166

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
                               CRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GF
Sbjct: 167 --------------------CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGF 206

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR
Sbjct: 207 LGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPR 266

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
            N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L E
Sbjct: 267 VNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLE 326

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  + 
Sbjct: 327 PPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFP 385

Query: 421 DTSKPCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGME 473
              +          +F+G+   + +  E V     +DI+   +      N     K GM+
Sbjct: 386 GNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMK 445

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTR 497
           I  +H+++KQ+  Y+  E  ++ +
Sbjct: 446 IEATHVKKKQLHHYLPAEILQKKK 469


>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
          Length = 547

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 183/409 (44%), Positives = 263/409 (64%), Gaps = 7/409 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT P+S A PT  ++  N  L + L   G +ES+   +KR +VL   + + + +V 
Sbjct: 3   KSYGVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVY 62

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +  SD M +DA   IFTFGSYRLGV+GP +DIDAL V P +V+RE DFF     I
Sbjct: 63  EVSISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKI 121

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA VP++K +FDG+S+DL+ A ++   V  D+ + D ++L ++DE 
Sbjct: 122 IRQRSELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDER 181

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA+ R VY NV GF GGV WA+L AR+
Sbjct: 182 DLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARI 241

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +YT W WP PV+L AI++  L   VW+PR    D+ H MP+I
Sbjct: 242 CQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVI 301

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V++ +   G+ I + +   +  WS LF  + FF  YR YL 
Sbjct: 302 TPAYPSMCATHNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDFFHRYRFYLC 361

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           V  VAA   +A++   W G+VES+LRQL + +E  T G    HPY  ++
Sbjct: 362 V--VAATSESAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDF 407


>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
          Length = 547

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 183/409 (44%), Positives = 264/409 (64%), Gaps = 7/409 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT P+S A PT  ++  N  L + L   G +ES+   +KR +VL   + + + +V 
Sbjct: 3   KSYGVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVY 62

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +  SD M +DA   IFTFGSYRLGV+GP +DIDAL V P +V+RE DFF     I
Sbjct: 63  EVSISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKI 121

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA VP++K +FDG+S+DL+ A ++   V  D+ + D ++L ++DE 
Sbjct: 122 IRQRPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDER 181

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA+ R VY NV GF GGV WA+L AR+
Sbjct: 182 DLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARI 241

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +YT W WP PV+L AI++  L   VW+PR    D+ H MP+I
Sbjct: 242 CQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVI 301

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V++ +   G++I + +   +  WS LF  + FF  YR YL 
Sbjct: 302 TPAYPSMCATHNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDFFHRYRFYLC 361

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           V  VAA   +A++   W G+VES+LRQL + +E  T G    HPY  ++
Sbjct: 362 V--VAATSESAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDF 407


>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
          Length = 564

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 179/412 (43%), Positives = 266/412 (64%), Gaps = 7/412 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT PIS A PT  +   N  L   L   G +ES++   KR ++L  ++++ +++V 
Sbjct: 4   KTYGVTAPISTANPTPKENALNDSLIAELKARGSFESEQATRKRVEILALLQKMVQEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +DA   IFTFGSYRLGV+GPG+DID L V P +V RE DFF I   +
Sbjct: 64  TVSKKKNMSDGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVVRE-DFFTIFDQM 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA VP++  +F G+SIDL++A ++   V  D+ + D ++L ++DE 
Sbjct: 123 IRQRPELEEITAVPDAFVPIIMIEFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDEN 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV DQIL+LVP V  F   LRC+K WA++R VY N+ GF GGV WA+LVAR+
Sbjct: 183 DMRALNGTRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +YT W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V+M++ + G+ +  ++ LN   W+ LF+ + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNINSSTQKVIMNELERGSELMAQISLNNKTWADLFQRHDFFHRYKFYLC 362

Query: 374 VDIVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
             I+AA     ++   W G VES+LR L   +E  T G    HPY  ++ D+
Sbjct: 363 --IIAATEGTNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSDS 411


>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
 gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
          Length = 558

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 181/403 (44%), Positives = 259/403 (64%), Gaps = 7/403 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS A PT  +   N  L + L   G +ES+    KR +VL  ++++A+ +V E+
Sbjct: 6   YGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAERFVYEV 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  +  SD M  DA   IFTFGSYRLGV+GPG+DIDAL V P +V+R  DFF +   IL 
Sbjct: 66  SLQKNMSDGMARDAGGKIFTFGSYRLGVYGPGSDIDALVVVPKHVTRN-DFFEVFEKILR 124

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           E +++ E+  V DA+VP++K   +G+SIDL++A +    V +DL + D ++L ++DE  +
Sbjct: 125 ERKDLEEIAAVPDAYVPIIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDEKDL 184

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNG RV D+IL LVP    F   LRC+K WA++R +Y+NV GF GGV WA+LVAR+CQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV +++V +FF +Y  W WP PV+L  I++  L   VW+PR    D+ H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITP 304

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N+++ST +++M +F+ G  I  ++  N   W+ L   + FF +Y+ YL   
Sbjct: 305 AYPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTFFHNYKFYLC-- 362

Query: 376 IVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           IVAA     ++ + W G VESRLR L   +E  T G    HPY
Sbjct: 363 IVAATKGPYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404


>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
          Length = 630

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 197/523 (37%), Positives = 304/523 (58%), Gaps = 35/523 (6%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS+A P   D+    +L + L E   YE KEE +KR +VL  + ++ K+WVK +T
Sbjct: 13  GVSQPISVAYPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNVT 72

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
            ++  S     +A   +FTFGSYRLGVH  GADID L V P ++ R  DFF     +L +
Sbjct: 73  AIKIPSGDGA-NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNQ 130

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
              VTEL  V +A VPVMK K+ G+ +D+L+A ++   V ++ ++SD  +L ++D  ++R
Sbjct: 131 DPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDAESIR 190

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRVA+Q+LKLVP  + FCT LR +K WAK  G+YSN  GF GG++WA+L+AR CQL
Sbjct: 191 SLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQL 250

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVML--CAIDEAE---LGFSVWDPRKNRRDKTHHMP 311
           YPNA PS LV R F +++ W WP+PV+L   A D  +   L   VWDP K   DK H MP
Sbjct: 251 YPNASPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMP 310

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPA+P  NS++NV+ S+ +++ D+      ICE++   KA+W  LFE   FF  Y+++
Sbjct: 311 IITPAFPEQNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFEEVNFFSRYKHF 370

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + + + A N ++ L++ G++ESR+R L   +ER+    +  H  P+++    KP  +  F
Sbjct: 371 IALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKH----KPSKNAKF 425

Query: 432 ------------FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM------E 473
                       F+GL     E  +     D+   ++ FK +  +      G+      E
Sbjct: 426 DVSPENKRITVWFIGL-----EFSEHATSLDLTNEIQRFKTNFELQASSVKGIGPTCQVE 480

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT 516
           I + H++++ +   +      R R  + +S++++  N +   T
Sbjct: 481 IDMFHVKQRNLIQVISAADLSRGRRWKKSSKKQNKGNSSNKLT 523


>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
          Length = 684

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 185/465 (39%), Positives = 283/465 (60%), Gaps = 29/465 (6%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV++PIS+A P   D+    +L + L E   YE KEE +KR +VL  + ++ K+WVK +T
Sbjct: 38  GVSQPISVAHPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNVT 97

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
            ++  S     +A   +FTFGSYRLGVH  GADID L V P ++ R  DFF     +L +
Sbjct: 98  AIKIPSGDGA-NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNQ 155

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
              VTEL  V +A VPVMK K+ G+ +D+L+A ++   V ++ ++SD  +L ++D  ++R
Sbjct: 156 DPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDPESIR 215

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCRVA+Q+LKLVP  + FCT LR +K WAK  G+YSN  GF GG++WA+L+AR CQL
Sbjct: 216 SLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQL 275

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTHHMP 311
           YPNA PS LV R F +++ W WP+PV+L  +++       L   +WDPR    D+ H MP
Sbjct: 276 YPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRFHLMP 335

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPA+P  NS++NV+ ST +++ D+      IC ++   +A+WSALFE   FF  Y+++
Sbjct: 336 IITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRAKWSALFEEVNFFSRYKHF 395

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + + + A N ++ L++ G++ESR+R L   +ER+    +  H  P+++    KP  +  F
Sbjct: 396 IALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKH----KPSKNAKF 450

Query: 432 ------------FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 464
                       F+GL     E  +  +  D+   ++ FK ++ +
Sbjct: 451 DVSPENKRITVWFIGL-----EFAEHAKNLDLTNEIQRFKTNVEL 490


>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
 gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
          Length = 558

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 179/409 (43%), Positives = 269/409 (65%), Gaps = 7/409 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++YGVT PIS A PT  +   N  L + L   G +ES++  +KR +VL   +++ +++V 
Sbjct: 5   RKYGVTDPISTANPTVKENALNDSLIQELKNRGSFESEQATKKRVEVLTLFQKLVQEFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +D+   +FTFGSYRLGV+GPG+DID L V P +V+R+ DFF +  +I
Sbjct: 65  TVSKSKNMSDGMAKDSGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFPDI 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA VP++K +FDG+SIDL+ A ++   V  ++ + D ++L ++DE 
Sbjct: 124 IRKRPELEEIACVPDAFVPIIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA++R VY NV GF GGV WA+LVAR+
Sbjct: 184 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +YT W WP PV+L +I++  L   VW+PR    D+ H MP+I
Sbjct: 244 CQLYPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V++ +   G++I  ++      WS LF+ + +F +Y+ YL 
Sbjct: 304 TPAYPSMCATHNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEYFHAYKFYLC 363

Query: 374 VDIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           V  VAA  D       W G+VESRLRQL L +E  T G    HPY  ++
Sbjct: 364 V--VAATVDTSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDF 409


>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
          Length = 703

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 222/607 (36%), Positives = 323/607 (53%), Gaps = 67/607 (11%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS+A PT  D++ ++ L + L + G+YES EE   RE VLGR+ ++ K++V   +
Sbjct: 7   GVTPPISVAPPTARDLEVSKTLIQELKDRGIYESAEEGRNREMVLGRLNKLVKEFVYRSS 66

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
              G SD    +A   IFTFGSYRLGVHGPG+DID L V P +V REE FF +   +L E
Sbjct: 67  INHGLSDAKAREAGGKIFTFGSYRLGVHGPGSDIDTLLVVPRHVEREE-FFSLFEQMLKE 125

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            E V E+  V +A VP++K  F G+ IDLL+A ++   V +DLD+ D ++L ++D+  +R
Sbjct: 126 TEGVLEVTGVPEAFVPIIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDDRCLR 185

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RV D++L+LVP+V  F   LR +K WA++R +Y NV GF GGV WA+LVAR+CQL
Sbjct: 186 SLNGSRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVARICQL 245

Query: 257 YPNAVPSMLVS--------------------RFFRVYTMWRWPNPVMLCAIDEAELGFSV 296
           YP      ++S                    RFF +   W+WP PV+L  I+E  L   V
Sbjct: 246 YPKGCVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPLQVRV 305

Query: 297 WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWS 356
           W+P+    D++H MPIITPAYP M S++NV+ ST ++M  +F+    I ++V +  A+WS
Sbjct: 306 WNPKLYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGSAKWS 365

Query: 357 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER-DTYGKLQCHPY 415
            LF+P+ FF  YR YLQ+   + +AD  L W G VESR+RQL + +E  DT   L  HP+
Sbjct: 366 ELFQPHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLEYVDTL--LLAHPF 423

Query: 416 PHEYVDTSKPCAH----------------------------------CAFFMGLQ--RKP 439
              + D    C +                                    F++GLQ  RKP
Sbjct: 424 VKSF-DRVNYCINEEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYIGLQIERKP 482

Query: 440 GEVVQEGQQFDIRGSVEEFKLSINMYMFWKP-GMEICVSHIRRKQIPPYVF----PEGYK 494
               +  ++ DI     EF   + M+  + P  M + V +I+   +P YV     PE  K
Sbjct: 483 AG-DKGPRKLDISYPTNEFTKLVKMWDSYDPDSMGVIVRYIKSTALPAYVHAGREPEPPK 541

Query: 495 RTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLA 554
                R  +++ +  N     + +      D    +    + R S    +  + +P  L 
Sbjct: 542 TGGVKRAKTKKANGSNAATAASPALANAATDDSDAEHLNKKHRASSFVPENATPTPAGLP 601

Query: 555 PSSVRSG 561
           P  V +G
Sbjct: 602 PVPVENG 608


>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
           Full=Polynucleotide adenylyltransferase
 gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
          Length = 400

 Score =  361 bits (926), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 181/374 (48%), Positives = 253/374 (67%), Gaps = 7/374 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P + D    ++L + L   G++E ++E + R   LG++  + K+W++
Sbjct: 15  KTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILSLGKLNNLVKEWIR 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++ L+     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  D F   +  
Sbjct: 75  EISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DLFSSFYEK 133

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D  
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNGCRV D+IL LVPN++ F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR 
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L KA+WS LF+   FF+ Y+ Y+ 
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK-YVF 372

Query: 374 VDIVAANADDLLAW 387
            +++A     + AW
Sbjct: 373 YNLLA-----MFAW 381


>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
 gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
          Length = 585

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 176/410 (42%), Positives = 269/410 (65%), Gaps = 3/410 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S+A  T A+ + N EL + L +   +E+++E   R +VL  ++++ +++V 
Sbjct: 5   KVYGITGPVSIAQSTAAENKLNDELVQELKKENSFETEQETANRVKVLEILQKLTENFVF 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++++ +  SD M +D+   +FTFGSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  KVSKNKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  E+ E+ PV DA VPV+K KF G+SIDLL A +    V  +L +SD ++L ++DE 
Sbjct: 124 LRERPELEEIAPVPDAFVPVIKVKFSGISIDLLCARLDIAQVPLNLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F  TLR +K WA+RR +Y+NV GF GGV WA+LVAR+
Sbjct: 184 ELRALNGTRVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++++ W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST  +++ +F  G  +  ++  NK  W  LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKTIILKEFARGVQVTNDIFSNKGNWGDLFKKHTFFYEYKFYLT 363

Query: 374 VDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           +       D + L W G VES+LR L L +E    G    HPY   +  T
Sbjct: 364 ITASTRGTDEEHLKWSGLVESKLRLLILKLEA-LPGINLAHPYTKPFEST 412


>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
 gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
          Length = 571

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 180/403 (44%), Positives = 264/403 (65%), Gaps = 7/403 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS+A PT  +   N  L K L   G +ES+   +KR +VL  ++++ +++V  +
Sbjct: 6   YGVTPPISVANPTPKENSLNDSLIKELKSRGSFESEAATKKRVEVLHILQKLTEEFVYTV 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  +  ++ M +DA   IFTFGSYRLGV+GPG+DID L V P +V+R  DFF +   IL 
Sbjct: 66  SINKNMNEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRS-DFFEVFDKILR 124

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           +  E+ E+  V DA+VP++K +F G+SIDL+ A +    + +DL + D ++L ++DE  +
Sbjct: 125 KRPELEEIASVSDAYVPIIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNIDEKDL 184

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNG RV D+IL LVP    F   LRC+K WA++R +Y+NV GF GGV WA+LVAR+CQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV +++V +FF +Y  W WP PV+L  I++  L   VW+P+    D+ H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPVITP 304

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N+++ST ++++D+F+ G  I  ++ +NK+ WS L   + FF  Y+ YL   
Sbjct: 305 AYPSMCATHNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTFFYKYKFYLC-- 362

Query: 376 IVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           IVAA   +++D L W G VESRLR L   +E  T G    HPY
Sbjct: 363 IVAATQGSSEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPY 404


>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
 gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
          Length = 582

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 181/448 (40%), Positives = 283/448 (63%), Gaps = 13/448 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S AG T A+ + N  L + L + G +ES++E E R +VL  ++++ +++V 
Sbjct: 5   KVYGITGPVSTAGSTAAENKLNDGLIQELKKEGSFESEQETENRVKVLKTLQELTQEFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M  DA   +F +GSYRLGVHGPG+DID L V P +V+RE DFF +   +
Sbjct: 65  RVSKKKNMSDGMARDAGGKVFPYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDEL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   +E+ E+  V DA VP++K KF G+SIDL+ A +    + + L ++D ++L ++DE 
Sbjct: 124 LRGRQELEEIAAVPDAFVPIIKMKFSGISIDLICAHLDLAQIPQSLTLADKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR +Y+NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++ + W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +   G  I  ++  NK  W+ LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKKVILGELGRGIRITNDIFTNKKTWADLFQRHTFFHEYKFYLT 363

Query: 374 VDIVAANAD--DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           V + A N D    L W G VES++R L L +E  T  K+  HPY       +KP    A+
Sbjct: 364 V-MAATNGDSEQHLKWSGMVESKVRLLVLKLEALTGIKI-AHPY-------TKPF-ETAY 413

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFK 459
           +   + +  ++V     +     ++EFK
Sbjct: 414 YYHNEEERKKIVDNYGTYKTEDVLKEFK 441


>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
          Length = 1547

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 174/405 (42%), Positives = 262/405 (64%), Gaps = 7/405 (1%)

Query: 14   KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
            KQYGVT PIS AGPT  + + N  + + L     +ES+ E +KR +VL  ++++ +++V 
Sbjct: 966  KQYGVTAPISTAGPTAKENELNDAMIEELRNQNSFESESETQKRREVLATLQKLTEEFVY 1025

Query: 74   ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
             ++R +  S+ M  DA   IFTFGSYRLGV+GPG+DID L V P +V+R+ DFF +   +
Sbjct: 1026 TVSRRKNMSEGMARDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVFEEL 1084

Query: 134  LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
            L +  E+ ++QPV DA +P++K  FDG+ IDL+   +    V  DL + D ++L ++D+ 
Sbjct: 1085 LRKRPELNKIQPVPDAFMPIIKTVFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNIDDR 1144

Query: 194  TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
             +R+LNG RV DQIL+LVP    F   LR +K WA+RR +Y+N+ GF GGV WA+LVAR+
Sbjct: 1145 DLRALNGTRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLVARI 1204

Query: 254  CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
            CQLYPNAV +++VS+FF++Y  W+WP PV+L  I++  L   +W+P+   +D+ H MP+I
Sbjct: 1205 CQLYPNAVGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVI 1264

Query: 314  TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
            TPAYP M +++N++ ST ++++ + Q G  I  +++  K  W  LF  + FF +Y+ YL 
Sbjct: 1265 TPAYPSMCATHNITASTQKIILKEMQRGLEIMNDIQFGKRTWKDLFAKHDFFFAYKFYLT 1324

Query: 374  VDIVAANADDL---LAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
            V  + A  D     L W G VES+LR L   +E    G +  HPY
Sbjct: 1325 V--ITATRDSYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPY 1366


>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
 gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
           WM276]
          Length = 644

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 205/573 (35%), Positives = 310/573 (54%), Gaps = 41/573 (7%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           M+S PP K  GVT PI+   P   D++ +  L   LV    +ES +E + RE++L  I Q
Sbjct: 1   MTSNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQ 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           +   +V +++   G S+++  +A   I+T GSYRLGVHGPG+DID +CV P ++ RE  F
Sbjct: 61  LVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-F 119

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F    ++L     VTE+  V  A VPVMK    G+ +DLL+A ++     + LDI    +
Sbjct: 120 FGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDLLDIEKDEI 179

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  VD+ + RSLNG RV D IL LVP+V  F T LR ++ WAKRRG+YSNV GF GGV W
Sbjct: 180 LRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAW 239

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRR 304
           ALL AR+CQLYP A P+ +V +FF +Y  W WP PV+L  ID     +  SVW+P+ +RR
Sbjct: 240 ALLTARICQLYPAAAPATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRR 299

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPYL 363
           D+ H MP+ITPAYP M S++N+++ST+ ++  +      I +E+ +   + W  LFE   
Sbjct: 300 DQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGSSWIPLFEKVD 359

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP--------- 414
           FF  Y+ Y+QV   A+ +D +  W G VESR+R L   +E +T   +  HP         
Sbjct: 360 FFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRVF 418

Query: 415 ---------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQFD 450
                             E +D +         +     +FF+GL+ +       G+  +
Sbjct: 419 YCLTEEEQAAASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLN 478

Query: 451 IRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE 509
           +    ++F  +  N   + +  M + +   +R ++PPYVFP+G  +++      QQ  SE
Sbjct: 479 LFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSKKKTKRQQQNGSE 538

Query: 510 NG--NEYQTGSGLKRKKDPESVDQDGPEKRQSI 540
           +   N+   G G  ++   E    +  E +Q +
Sbjct: 539 DAGMNDGSEGQGPSKRTKSEQTSFNNSELQQQL 571


>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
 gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
          Length = 639

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 196/510 (38%), Positives = 296/510 (58%), Gaps = 25/510 (4%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           MS+       GV++PIS+A P   D+    +L + L +   YE K E EKR +VL  + +
Sbjct: 1   MSAQDKTPLLGVSQPISLAHPDAKDILLTEQLVETLKKCNSYEPKAETEKRMEVLRSLNR 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           + K+WVK +T ++  S +   +A   +FTFGSYRLGVH  GADID L V P ++ R  DF
Sbjct: 61  LVKEWVKNVTAIKIPSGEGA-NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DF 118

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F     +L++   VTEL  V +A VPVMK K+ G+ +D+L+A ++   V +  ++SD S+
Sbjct: 119 FTSFKEMLSQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDSL 178

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L ++D+ +VRSLNGCRVA+Q+LKLVP   ++C  LR +K WAK  G+YSN  GF GG++W
Sbjct: 179 LKNLDQESVRSLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGISW 238

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRK 301
           A+L+AR CQLYPNA PS LV R F ++  W WP+PV+L  +     D   L   VWDPR+
Sbjct: 239 AILIARACQLYPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRR 298

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
              D+ H MPIITPA+P  NS++NV+ ST++V+  +   G  IC ++   K  W ALF+ 
Sbjct: 299 KSTDRFHLMPIITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRDISEGKCGWDALFKE 358

Query: 362 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD-----TYGKLQCH-PY 415
             FF  Y++Y+ + + A N ++ L + G++ESR+R L   +ER+      +     H P 
Sbjct: 359 VNFFSRYKHYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQDIVIAHNDPNKHKPS 418

Query: 416 PHEYVDTSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-- 472
           P+   D S        +F+GL     E V+  +  D+   +  FK ++ +      G+  
Sbjct: 419 PNAKFDVSPENKRITLWFIGL-----EFVEHTKSLDLTSEIHRFKTNVELQASGVKGIGP 473

Query: 473 ----EICVSHIRRKQIPPYVFPEGYKRTRH 498
               EI + +++R ++   +      R RH
Sbjct: 474 NCTVEIDMFYVKRNKLFQIISNADLIRGRH 503


>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
          Length = 568

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 176/407 (43%), Positives = 268/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E  T  K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLTGIKI-AHPFTKPF 409


>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
 gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
          Length = 558

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 198/518 (38%), Positives = 286/518 (55%), Gaps = 50/518 (9%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS A  +  D +    L + L     +ES +E   RE VLGRI  + K +V  + 
Sbjct: 7   GVTPPISTAESSAEDQKLTESLMQELRAQSTFESDQESRTREIVLGRISALVKKFVTTVA 66

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           +  G SD     A   IFTFGSYRLGVHGPG+DID LCV P +V+R+E FF +   +L E
Sbjct: 67  KAHGLSDATANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVNRDE-FFSVFEPMLRE 125

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVLNDVDEPTV 195
              +TE+  V DA VP++K K  G+ +DLL A + +L  + +DL + +  +L ++DE  +
Sbjct: 126 EPNITEVSGVPDAFVPIIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLDERCI 185

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           +SL G R+ D+IL L+PN + F   LRC+K WA+RR +YSN+ GFLGGV WA+LVAR+CQ
Sbjct: 186 KSLGGSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVARICQ 245

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV   +V RFF +   W+WP PV+L  I+E  L   +W+P+    D+ H MPIITP
Sbjct: 246 LYPNAVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIITP 305

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           +YP MNS++NVS ST  VM+ +F+ G  I  +++  +A W+ LF  + FF  +R+YLQ  
Sbjct: 306 SYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFFTDFRHYLQ-- 363

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC-HPYPHEYV-------------- 420
            + A+ADD  +   W      QL L ++      +Q   P+   +               
Sbjct: 364 -IVASADDQHSHDKW------QLVLRLDAQEGSIIQVTRPFIKGFERIYHCISDDERRAA 416

Query: 421 -----------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
                            D +      AFF+GL+ KP +     +Q +I     EF    N
Sbjct: 417 TEGRFSDLKAAEGRPAGDKTTTVYTTAFFLGLEFKPKDGNSGTRQLNISFPTGEF---CN 473

Query: 464 MYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
           +   W    +  M + V HI+R ++P +V+    +R R
Sbjct: 474 LVKKWETYDETKMRVNVRHIKRSELPEFVYESPAERPR 511


>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
          Length = 569

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 174/407 (42%), Positives = 267/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E++ E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLVQELKKEGSFETEHETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +   +
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDAL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V + L ++D ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPQSLTLADKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F+ G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFYRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWGGLVESKVRLLIMKLEVLAGIKI-AHPFTKPF 409


>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
 gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
          Length = 557

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 179/408 (43%), Positives = 260/408 (63%), Gaps = 5/408 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT P+S+A PT  +++ N  L   L   G +ES++  +KR +VL   + + +++V 
Sbjct: 4   KTYGVTGPVSLANPTPNEIKLNDLLISELKARGSFESEQATKKRVEVLTLFQNMVQEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M  DA   +FTFGSYRLGV+GPG+DID L V P +V RE DFF +   I
Sbjct: 64  TVSKNKNMSDGMARDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVGRE-DFFTVFEQI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           + +  E+ E+  V DA VP++K +FDG+SIDL+Y+ ++   V  D+ + D ++L ++DE 
Sbjct: 123 IRKRPELEEITSVPDAFVPIIKIEFDGISIDLIYSRLNVPRVPLDMTLEDKNLLKNIDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL+LVP    F   LRC+K WA++R VY NV GF GGV WA+L AR+
Sbjct: 183 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNVFGFPGGVAWAMLTARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV + +V +FF +YT W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVGATIVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N+++ST +V+M + + G  I   V   +  W+ LFE + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQKVIMKELERGAEIMSLVASGEKTWADLFERHSFFHDYKFYLC 362

Query: 374 VDIVAANADD--LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           + + A  ADD     W G +ES+LR L   +E  T G    HPY  ++
Sbjct: 363 I-VAATLADDEEHHKWSGMIESKLRILVQKLEV-TDGIALAHPYVKDF 408


>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
 gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
          Length = 598

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 206/575 (35%), Positives = 306/575 (53%), Gaps = 76/575 (13%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           S PP +Q+GVT PIS A PT  ++  N +L   L     +ES  E E+R+QVL  ++++A
Sbjct: 2   STPPVRQWGVTPPISTALPTSDELAANDDLISELKTQNNFESPAETERRKQVLQLLQRVA 61

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
            ++VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L VGP +V   +DFF 
Sbjct: 62  LEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHV-LIDDFFS 120

Query: 129 ILHNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
               +L +M     + ++ PV DA VP++K +  G+SIDL++A +    V  +LD+ +  
Sbjct: 121 DFPPVLEKMAPPGAIEKMTPVPDAFVPIIKMELSGISIDLIFARLIVSSVPLNLDLKNND 180

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
            L  +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV 
Sbjct: 181 YLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WA+LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D
Sbjct: 241 WAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGD 300

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYP M +++NVS ST  V++ + Q G  I +++ L +  W+ LF  + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFF 360

Query: 366 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 417
            + Y+ YL +   +   +    W G VES++R L   ++R     +  HP+P        
Sbjct: 361 TQDYKYYLSITASSKTKEAESVWSGLVESKIRHLVGALDRKNTIAV-AHPFPKGFERVHL 419

Query: 418 ------------------------EYVDTSKPCAHCA----------------------- 430
                                   E  D +   AH A                       
Sbjct: 420 VSSEEEAEAVKNGSTKYQDKGTKTETTDETNDIAHQAAAQNGVENAEVEPVGQKENGDSR 479

Query: 431 ------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQ 483
                 +++GL+ KP E     +  DI    + FK +   +  ++PG+ ++ ++H+R   
Sbjct: 480 TIYTTTYYIGLELKPLE-PGASRSLDISTDAQIFKSTCTSWAGYQPGINDLAITHVRNFD 538

Query: 484 IPPYVFPEGYKR--------TRHPRLASQQRSSEN 510
           +P  VF  G  R         R P   +Q+R  E+
Sbjct: 539 LPDDVFQPGETRPTRPKKKIIRRPEAGAQKRGIES 573


>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
          Length = 568

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 175/407 (42%), Positives = 267/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409


>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
 gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
           Full=Polynucleotide adenylyltransferase
 gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
 gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
 gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
 gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
 gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
 gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
 gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
 gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
 gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
 gi|228305|prf||1802393A poly(A) polymerase
          Length = 568

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 175/407 (42%), Positives = 267/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409


>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
 gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
          Length = 567

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 180/403 (44%), Positives = 266/403 (66%), Gaps = 3/403 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S AGPT A+ + N  L + L     +E+++E   R +VL  ++++A+ +V 
Sbjct: 5   KVYGITGPVSTAGPTAAENKLNDGLIQELKRNNSFETEKETANRVEVLKLLQELAQRFVF 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +  SD M +DA   IFTFGSYRLGVHGPG+DID L V P +VSRE DFF    ++
Sbjct: 65  NVSKKKNMSDGMAKDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVSRE-DFFTEFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  E+ E+ PV DA VPV+K K  G+SIDLL A +    V E L +SD ++L +VDE 
Sbjct: 124 LRERSELDEIAPVPDAFVPVIKIKLRGISIDLLCAKLDIAQVPESLVLSDNNLLRNVDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+ R VY+NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++ + W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++++F  G  I  ++  +K  WS LF  + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITDSTKKVILEEFSRGIQITNDIFSSKKSWSDLFNKHEFFYKYKFYLT 363

Query: 374 VDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           +     A+ ++ L W G VES++R L L +E  +  K+  HP+
Sbjct: 364 ITASTRASDEEHLKWSGLVESKVRLLVLKLEALSGIKI-AHPF 405


>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 556

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 194/416 (46%), Positives = 269/416 (64%), Gaps = 4/416 (0%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           +SS    S P   +  GVT PIS   PTE ++    +L + L + G YES+EE +KRE V
Sbjct: 10  ISSGFNTSYPQRHRHLGVTPPISENPPTEKEIACTEQLVQTLRDYGQYESEEEAQKREIV 69

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           LG+I  I K++V+ ++   G  + +  D    IFTFGSYRLGVHG  +DID LCV P +V
Sbjct: 70  LGKIDAIFKEFVRSVSIKNGLPESLANDVGGKIFTFGSYRLGVHGKKSDIDTLCVAPKHV 129

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD 180
            RE DF   ++ +L   +EV+E+  V DA+VP++K +F  +SIDL++A ++   V EDLD
Sbjct: 130 KRE-DFLEYMYELLKARQEVSEITAVADAYVPIIKLEFSDISIDLVFARLALPTVSEDLD 188

Query: 181 ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
           +SD S+L ++D+  +RSLNG RV D IL+LVPNVE F   LRC+K WA +R +YSNV GF
Sbjct: 189 LSDDSLLKNLDDRCIRSLNGSRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGF 248

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
            GGV WA+L+ARVCQLYP A    +VS+FF++   W WP PV+L  I+E  L   VW+P+
Sbjct: 249 FGGVAWAILIARVCQLYPCAAAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPK 308

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
              +DK H MPIITPAYP M S++NV+ ST  V   +F+      +++ L + +W+ LF+
Sbjct: 309 IYPQDKAHRMPIITPAYPSMCSTHNVTVSTQTVTTQEFERAAVTTDKIMLGREKWTVLFQ 368

Query: 361 PYLFFESYRNYLQVDIVAANADD-LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
              FF  Y+ YLQV I ++N D+  L W G+VESRLRQL + +E      +  HPY
Sbjct: 369 KNDFFHRYKYYLQV-IASSNDDEKQLMWAGFVESRLRQLVMKLELAENLDI-AHPY 422


>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 569

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 175/407 (42%), Positives = 266/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V RE DFF +   +
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVIRE-DFFTVFDAL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F+ G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409


>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
           Conformation
          Length = 530

 Score =  357 bits (917), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 175/407 (42%), Positives = 267/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409


>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
           And 3'-Datp
 gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
           And 3'-Datp
 gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
           80-105
 gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
           80-105
          Length = 537

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 175/407 (42%), Positives = 267/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409


>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
          Length = 560

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 175/408 (42%), Positives = 267/408 (65%), Gaps = 3/408 (0%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT PIS   P+  ++  N +L   L   G +ES++   KR ++L   +++ +++V ++
Sbjct: 6   FGVTPPISTDNPSPKEITLNDQLIAELKARGSFESEQATRKRVEILNLFQKLVQEFVHKV 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           ++ +  S+ M +DA   IFTFGSYRLGV+GPG+DID L V P +V+RE DFF +  +I+ 
Sbjct: 66  SKSKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFSVFESIVR 124

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           E  E+ E+  V DA VP++K +FDG+SIDL+ A+++   V  ++ + D ++L ++DE  +
Sbjct: 125 ERPELEEITSVPDAFVPIIKIEFDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDERDM 184

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           R+LNG RV D+IL+LVP    F   LRC+K WA+ R VY NV GF GGV WA++VAR+CQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVARICQ 244

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV +++V +FF +YT W WP PV+L  I++  L   VW+PR    D+ H MPIITP
Sbjct: 245 LYPNAVGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITP 304

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N+++ST +V++ +   G  I  +++L K  WS LF+ + FF  Y+ YL + 
Sbjct: 305 AYPSMCATHNITSSTQKVILSELVKGVDIVGDIKLGKRTWSDLFQRHDFFFRYKFYLCIV 364

Query: 376 I-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           +   AN ++   W G+VES+LR L   +E  T G    HPY  ++ D+
Sbjct: 365 VGTKANEEEHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFNDS 411


>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
          Length = 590

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/512 (37%), Positives = 294/512 (57%), Gaps = 28/512 (5%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+G T PIS A PT +++  N  L   L     +E+  E EKR Q+L  I+++  ++VK
Sbjct: 7   KQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            + R +G S   ++ +   IF +GSYRLGV+GPG+DID L VGP +V+ E DFF      
Sbjct: 67  TVGRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDFPPT 125

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A  + + +L PV DA+VP++K +  G+SIDL++A +    +  DLD+ +  +L  +
Sbjct: 126 LERLAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+ R +YSNV GF GGV WA+LV
Sbjct: 186 DEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           PIITPAYP M +++NVS ST  V++ + + G  I E++ L + +WS LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--------- 420
            YL +   + + +    W G VE++LR L + +++    ++  HP+P  +V         
Sbjct: 366 YYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIEV-AHPFPKAHVAALESANGS 424

Query: 421 ----------DTSKPCAH-CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK 469
                     +++    H   +++GL+ KP  V    +  DI      FK     +  ++
Sbjct: 425 INMPGLGQTEESNNHTLHTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQ 483

Query: 470 PGM-EICVSHIRRKQIPPYVFPEGYKRTRHPR 500
           PG+ ++ ++H+R   +P  VF  G  R   P+
Sbjct: 484 PGINDLTITHVRNYDLPEDVFHPGETRPVRPK 515


>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
           State
 gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
           State
          Length = 546

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 175/407 (42%), Positives = 267/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409


>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
 gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
          Length = 557

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 179/401 (44%), Positives = 258/401 (64%), Gaps = 3/401 (0%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS+  PT  D + N  L K L   G YES+    KR +VL  ++++ +D+V E+
Sbjct: 11  YGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVYEV 70

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  +  +  M +DA   IFTFGSYRLGV+GP +DIDAL V P +V+RE DFF +   IL 
Sbjct: 71  SLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFEKILR 129

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
              E+ E+  V +A VP++K +F G+SIDLL+A +    V  DL + D ++L ++DE  +
Sbjct: 130 GRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDM 189

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           R+LNG RV D+IL+LVP    F   LR +K WA++R VY+NV GF GGV WA+LVAR+CQ
Sbjct: 190 RALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQ 249

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV ++++ +FF++Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+ITP
Sbjct: 250 LYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITP 309

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL-QV 374
           AYP M +++N++ ST +++M++F  G  I  E+   +  WS L E + FF  Y+ YL  V
Sbjct: 310 AYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVV 369

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
               +NA++ L + G VES+LR L   +E+   G    HPY
Sbjct: 370 AATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPY 409


>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
 gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
          Length = 557

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 179/409 (43%), Positives = 265/409 (64%), Gaps = 7/409 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT PIS+A PT  + + N  L K L + G +ES+   +KR +VL  ++++ +D+V ++
Sbjct: 6   FGVTPPISVANPTAKENELNDLLIKELKQRGSFESETATKKRVEVLNILQKMTEDFVFKV 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  +  S+ M +DA   IFTFGSYRLGV+GPG+DID L V P +V+R  DFF   + +L 
Sbjct: 66  SIKKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVTRN-DFFETFYELLK 124

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
             +E+ E+ PV DA VP++K +F G+SIDL++A +    V  DL + D ++L ++DE  +
Sbjct: 125 TRDELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVSRDLTLDDKNLLKNIDEKDL 184

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           R+LNG RV D+IL LVP    F   LRC+K WA++R +Y+NV GF GGV WA+LVAR+CQ
Sbjct: 185 RALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV ++++ +FF +Y+ W WP PV+L  I++  L   VW+P+    D+ H MP+ITP
Sbjct: 245 LYPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPVITP 304

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N+++ST +V++ +FQ G  I   +      WS LFE + FF  Y+ YL   
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIEIMNGINSGSKTWSDLFERHDFFFRYKFYLC-- 362

Query: 376 IVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
           IVAA   N+++ L + G VES+LR L   +E    G    HPY   + D
Sbjct: 363 IVAATKSNSEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410


>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
          Length = 598

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 202/568 (35%), Positives = 304/568 (53%), Gaps = 68/568 (11%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP +Q+GVT PIS   PT  ++  N +L   L     +ES  E E+R+QVL  I+++  +
Sbjct: 4   PPVRQWGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L VGP +V  + DFF   
Sbjct: 64  FVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIID-DFFSDF 122

Query: 131 HNILAEMEE---VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             IL +M     + ++ PV DA+VP++K +  G+SIDL++A +    +  +LD+ +   L
Sbjct: 123 PPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA
Sbjct: 183 RGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++NVS ST  V++ + Q G  I +++ L + +W  LF  + FF +
Sbjct: 303 HLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTK 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--------- 417
            Y+ YL +   +   +    W G VES++R L   ++R     +  HP+P          
Sbjct: 363 DYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGFERVHRVS 421

Query: 418 ----------------------EYVDTSKPCAHCA------------------------- 430
                                 E  D  K  AH A                         
Sbjct: 422 SEEEIEAVKTGSTKYQDKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVM 481

Query: 431 ----FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIP 485
               +++GL+ KP E     +  DI    + FK +   +  ++PG+ ++ ++H+R   +P
Sbjct: 482 YTTTYYIGLELKPLE-PGASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLP 540

Query: 486 PYVFPEGYKRTRHPRLASQQRSSENGNE 513
             VF  G  R   P+    +++  +G +
Sbjct: 541 EDVFQPGETRPTRPKKKIVKKAEISGQK 568


>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
          Length = 552

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 179/403 (44%), Positives = 259/403 (64%), Gaps = 3/403 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS+  PT  D + N  L K L   G YES+    KR +VL  ++++ +D+V 
Sbjct: 4   QTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +  +  M +DA   IFTFGSYRLGV+GP +DIDAL V P +V+RE DFF +   I
Sbjct: 64  EVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFEKI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    E+ E+  V +A VP++K +F G+SIDLL+A +    V  DL + D ++L ++DE 
Sbjct: 123 LRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA++R VY+NV GF GGV WA+LVAR+
Sbjct: 183 DMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV ++++ +FF++Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL- 372
           TPAYP M +++N++ ST +++M++F  G  I  E+   +  WS L E + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLC 362

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
            V    +NA++ L + G VES+LR L   +E+   G    HPY
Sbjct: 363 VVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPY 404


>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 488

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 174/407 (42%), Positives = 266/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 5   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 65  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SIDL+ A + +  V   L +SD ++L ++DE 
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++  T +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 304 TPAYPSMCATHNITECTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 409


>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
 gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
          Length = 603

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 201/553 (36%), Positives = 298/553 (53%), Gaps = 69/553 (12%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           S PP +Q+GVT PIS A PT  ++  N +L   L     +ES  E E+R+QVL  I+++ 
Sbjct: 2   STPPVRQWGVTPPISTALPTSEELAANDDLISELKAQNNFESPAETERRKQVLQLIQRVT 61

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
            ++VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L VGP +V   +DFF 
Sbjct: 62  HEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHV-LIDDFFS 120

Query: 129 ILHNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
               +L +M     + ++ PV DA VP++K +  G+SIDL++A +    V  +LD+ +  
Sbjct: 121 DFPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNND 180

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
            L  +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV 
Sbjct: 181 YLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WA+LVARVCQLYP+A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D
Sbjct: 241 WAMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGD 300

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYP M +++N+S ST  V++ + Q G  I +++ L +  W+ LF  + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFF 360

Query: 366 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------- 417
            + Y+ YL +   +   +    W G VES++R L   ++R     +  HP+P        
Sbjct: 361 TQDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGFERVHI 419

Query: 418 ------------------------EYVDTSKPCAHCA----------------------- 430
                                   E  D  K  AH A                       
Sbjct: 420 VSNEEEAEAVKNGSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSANGDS 479

Query: 431 -------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRK 482
                  +++GL+ KP E     +  DI    + FK +   +  ++PG+ ++ ++H+R  
Sbjct: 480 HIIYTTTYYIGLELKPLE-PGASRSLDISTDAQIFKSTCTSWAGYQPGINDLSITHVRNF 538

Query: 483 QIPPYVFPEGYKR 495
            +P  VF  G  R
Sbjct: 539 DLPDDVFQPGETR 551


>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
           grubii H99]
          Length = 644

 Score =  355 bits (910), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 206/600 (34%), Positives = 312/600 (52%), Gaps = 51/600 (8%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           M+S PP K  GVT PI+   P   D++ +  L   LV    +ES +E + RE++L  I Q
Sbjct: 1   MTSNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQ 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           +   +V +++   G S+++  +A   I+T GSYRLGVHGPG+DID +CV P ++ RE  F
Sbjct: 61  LVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-F 119

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F    ++L     VTE+  V  A VPVMK    G+ +DLL+A ++     + LDI    +
Sbjct: 120 FGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEI 179

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  VD+ + RSLNG RV D IL LVP+V  F T LR ++ WAKRRG+YSNV GF GGV W
Sbjct: 180 LRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAW 239

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRR 304
           ALL AR+CQLYP A P+ ++ +FF +Y  W WP PV+L  ID     +  SVW+P+ +RR
Sbjct: 240 ALLTARICQLYPAAAPATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRR 299

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPYL 363
           D+ H MP+ITPAYP M S++N+++ST+ ++  +      I +E+ +   + W  LFE   
Sbjct: 300 DQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVD 359

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP--------- 414
           FF  Y+ Y+QV   A+ +D +  W G VESR+R L   +E +T   +  HP         
Sbjct: 360 FFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRLF 418

Query: 415 ---------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQFD 450
                             E +D +         +     +FF+GL+ +       G+  +
Sbjct: 419 YCLTEEEQAAASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLN 478

Query: 451 IRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE 509
           +    ++F  +  N   + +  M + +   +R ++P YVFP+G  +++      QQ  S 
Sbjct: 479 LFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGSG 538

Query: 510 NGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPV 569
           +        G             GP KR        ++  P    P+ V    G++  P+
Sbjct: 539 DAGMNDGSEG------------QGPSKRTKSEQTSINNFEPQQQLPNGVPVPNGADPVPL 586


>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
          Length = 624

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 221/609 (36%), Positives = 320/609 (52%), Gaps = 78/609 (12%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS  GP+  ++    +L   L   G +ES EE   RE VLGR+ ++ K+++ 
Sbjct: 8   RDYGVTPPISRDGPSPQEITLAADLMTEL--KGTFESAEEGRTREAVLGRVTKLVKEFIY 65

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +    R  S+   + A   I+TFGSYRLGVHGPG+DID L V P +V R+ DF  I  ++
Sbjct: 66  QACIRRNLSEAAAKAAGGKIYTFGSYRLGVHGPGSDIDTLVVAPKHVDRQ-DFMEIFLDL 124

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L + + V E  PV DA+VPV+  K  G+S+D  +A ++  V+ +DL++ D S+L ++D+ 
Sbjct: 125 LQKDDWVEEANPVPDAYVPVIDAKIKGISMDFTFARLALSVIPDDLELGDDSLLKNLDDK 184

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRSLNG R  D IL+LVPNV  F   LR +K+WA+RR +YSNV+GFLGG+ WALLVARV
Sbjct: 185 CVRSLNGSRSTDAILRLVPNVHVFRDALRAIKYWAQRRAIYSNVSGFLGGIAWALLVARV 244

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPN   + +V RFF + +MW+WP PV+L  I+E  L   VW+P+    D+ H MPII
Sbjct: 245 CQLYPNGNAATIVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDRAHKMPII 304

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M S++NV   T  ++ ++ + G  +   +   +A+W+ LF  + FF  Y+ YLQ
Sbjct: 305 TPAYPSMCSTHNVMNCTFEIIQEELKRGQELIVRITNGEAKWADLFTKHTFFSQYQYYLQ 364

Query: 374 VDIVAANADDLLAWKGW---VESRLRQLTLMIERDTYGKL-QCHPYP------------H 417
              + A+ DD    K W   VES+ RQL   +E    G L + HP+              
Sbjct: 365 ---IIASCDDEEIQKKWSKTVESKGRQLVGKLEES--GTLARVHPFVKGFNKTYYTVTMQ 419

Query: 418 EYVD-----------------------TSKPCAH-CAFFMGLQ--RKPGEVVQEG-QQFD 450
           E+ D                         +   H   F++G++  R P  V   G ++ D
Sbjct: 420 EHADIVLGNVPPAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSVTTTGPRKLD 479

Query: 451 IRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE 509
           I     EF K + +  ++    M I V HI+   +P  VF EG  R R            
Sbjct: 480 ISIPTSEFMKTARSWELYQNDIMGIAVRHIKNSALPDEVF-EGAPRPR------------ 526

Query: 510 NGNEYQTGSGLKR-KKDPESVDQDGPE----KRQSISPQKQDSLSPDHLAPSSVRSGTGS 564
                    GLKR  K    +D +G +    +R S   Q    ++P  L P+ + +   S
Sbjct: 527 --------KGLKRVAKSKVPIDGEGAQATKRRRPSDDGQTPTPVNPQSLVPAQLPAIPAS 578

Query: 565 NVEPVIPDK 573
           +     P K
Sbjct: 579 DFAQAGPPK 587


>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 642

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 207/600 (34%), Positives = 312/600 (52%), Gaps = 51/600 (8%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           M+S PP K  GVT PI+   P   D++ +  L   LV    +ES +E + RE++L  I Q
Sbjct: 1   MTSNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQ 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           +   +V +++   G S+++  +A   I+T GSYRLGVHGPG+DID +CV P ++ RE  F
Sbjct: 61  LVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-F 119

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F    ++L     VTE+  V  A VPVMK    G+ +DLL+A ++     + LDI    +
Sbjct: 120 FGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEI 179

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  VD+ + RSLNG RV D IL LVP+V  F T LR ++ WAKRRG+YSNV GF GGV W
Sbjct: 180 LRGVDDASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAW 239

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRR 304
           ALL AR+CQLYP A P+ +V +FF +Y  W WP PV+L  ID     +  SVW+P+ +RR
Sbjct: 240 ALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRR 299

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPYL 363
           D+ H MP+ITPAYP M S++N+++ST+ ++  +      I +E+ +   + W  LFE   
Sbjct: 300 DQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVD 359

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP--------- 414
           FF  Y+ Y+QV   A+ +D +  W G VESR+R L   +E +T   +  HP         
Sbjct: 360 FFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRVF 418

Query: 415 ---------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQFD 450
                             E +D +         +     +FF+GL+ +       G+  +
Sbjct: 419 YCLTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLN 478

Query: 451 IRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSE 509
           +    ++F  +  N   + +  M + +   +R ++P YVFP+G  +++      QQ  S 
Sbjct: 479 LFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGSG 538

Query: 510 NGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPV 569
           +        G             GP KR        ++  P    P+ V    G++  P+
Sbjct: 539 DAGMNDGSEG------------QGPSKRTKSEQTLINNFEPQQQLPNGVPVPNGADPVPL 586


>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
          Length = 1333

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 205/520 (39%), Positives = 300/520 (57%), Gaps = 25/520 (4%)

Query: 14   KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
            K YGV++PIS+A PT  D+     L + L   G +E+KEE  KR QVL  +    K W++
Sbjct: 819  KIYGVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQ 878

Query: 74   ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
             ++  R  + +  E A   + +FGSYRLGVH  G DID++ + P  VSR  DFF  L +I
Sbjct: 879  GISSARLPNGKFFE-AGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDI 936

Query: 134  LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
            L     V  L  V  A VP+M F+F G+ +DLL+A +   V+ E +D++D ++L ++D+ 
Sbjct: 937  LLRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQE 996

Query: 194  TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +VRSLNG RVA+++L+LVPN E FC TLR +K WAK  GVYSN  GF GG+ WALLVAR 
Sbjct: 997  SVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVART 1056

Query: 254  CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDPRKNRRDKTH 308
            CQLYPNA PS LV + F V++ W +P+P++LC       D   L    W   +N  D+ H
Sbjct: 1057 CQLYPNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFH 1114

Query: 309  HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
             MPIITPA+P  NS++NVS ST+ V+  +      IC +V   K  W  LFE   F+  Y
Sbjct: 1115 LMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALIICNDVFEGKCDWKFLFEEVNFYSQY 1174

Query: 369  RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
            ++++ + + A   +   ++ G++ESRLR L    ER+   KL  H  P +   TSK  + 
Sbjct: 1175 KHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSK--SQ 1231

Query: 429  CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIP 485
              +F+GL+    EVV   +  D+   ++ FK ++N+      G   +E+ +S+++R Q+ 
Sbjct: 1232 SLWFIGLEF--DEVV---KNMDLTREIDNFKWNLNVQAKQIAGFEDVELDISYVKRSQLI 1286

Query: 486  PYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 525
             Y+     K+    R    + S+E+  E     GLKRK D
Sbjct: 1287 KYLPAAELKKG---RFFVAKGSAEDNKE--NAGGLKRKCD 1321


>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
           Oligo(A)
          Length = 525

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 174/407 (42%), Positives = 266/407 (65%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+S  G T A+ + N  L + L + G +E+++E   R QVL  ++++A+ +V 
Sbjct: 1   KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 60

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E+++ +  SD M  DA   IFT+GSYRLGVHGPG+DID L V P +V+RE DFF +  ++
Sbjct: 61  EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 119

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E +E+ E+ PV DA VP++K KF G+SI L+ A + +  V   L +SD ++L ++DE 
Sbjct: 120 LRERKELDEIAPVPDAFVPIIKIKFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDEK 179

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 180 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 239

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF + + W WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 240 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 299

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +F  G  I  ++  NK  W+ LFE   FF  Y+ YL+
Sbjct: 300 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 359

Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           +      +D+  L W G VES++R L + +E     K+  HP+   +
Sbjct: 360 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF 405


>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
          Length = 511

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 178/485 (36%), Positives = 287/485 (59%), Gaps = 13/485 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P++  GP++ D++ ++EL   L    LYE+ E  ++RE+VL  + ++ + +V+
Sbjct: 11  KSYGITAPVTTEGPSKEDLKASQELIVLLKSYNLYETDEGKKRREEVLESLNRLLQQFVR 70

Query: 74  ELTRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
              ++  G +DQ      A + TFGSYRLG+  P +DID  C+ P  ++RE  FF   +N
Sbjct: 71  RQVKINMGLTDQEANSVTAKLLTFGSYRLGIVAPDSDIDVACLCPRGITREA-FFSDFYN 129

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
            L ++E +T+LQ V DA+ PV+K  +  +SID+L++++    V  ++++ D  +L ++ +
Sbjct: 130 TLTKVEGITKLQSVPDAYTPVIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILRNMSD 189

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRS+NGCRVA  IL  VP   +F TTLR +K WA RR +YS V G+LGGV WA+L AR
Sbjct: 190 SNVRSINGCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTAR 249

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKT 307
           VCQ+YPN  P+ L+ +FF+V++MW W  PV LC I         + F VWDP  + +D+ 
Sbjct: 250 VCQMYPNFAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQ 309

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFE 366
           H MPIITPA+P MNS++NV+ +T RV+ ++      + +   L   Q W  + E    F 
Sbjct: 310 HLMPIITPAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQLWEMVLEEEDVFS 369

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
            Y+++L +++  ++      W+GW+ SR+R L   +E   Y +++  P   ++ D     
Sbjct: 370 KYKHFLVIEVYGSSEHAHNKWEGWIGSRMRFLIKKLETLEYTQIRPLPGFFKFEDRDWEY 429

Query: 427 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQ 483
           A  AFF      P  VV+  Q FDIR  ++ FK  IN +     +K  +++ + +++ KQ
Sbjct: 430 ASSAFFAFKHTAP--VVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNIRYLKSKQ 487

Query: 484 IPPYV 488
           +P Y+
Sbjct: 488 LPDYI 492


>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
          Length = 557

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 177/406 (43%), Positives = 255/406 (62%), Gaps = 9/406 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           G+T PIS+A PT+ + Q +  L + L +    ES++E   RE+VL  ++ + K++VK ++
Sbjct: 1   GITPPISLASPTDLEKQVDAGLIQELKDQNTIESEQESLNREKVLALVQSLVKEFVKRVS 60

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
              G S+ + + A   IFTFGSYRLGV+ PGADID LCV P +VSRE DFF +   +L  
Sbjct: 61  IRNGMSESLADQAGGKIFTFGSYRLGVNQPGADIDTLCVVPKHVSRE-DFFDVFEPLLKT 119

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            EEV+    V DA+VP++K    G+ ID L A ++   + +DL+++D ++L ++DE  VR
Sbjct: 120 REEVSVCAGVPDAYVPIIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDERCVR 179

Query: 197 SLN-------GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           SLN       G RV D+IL++VPNV+ F  +LRC+K WA+RR +YSNV GFLGGV WA+L
Sbjct: 180 SLNDNLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVAWAML 239

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VAR+CQLYPN     ++++FF +   W+WP+PV+L  I++  L   VW+P+    D+ H 
Sbjct: 240 VARICQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHR 299

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP M S++NV  ST  VM  +F+ G  I + +      WS LF  + FF  Y+
Sbjct: 300 MPIITPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQLFNKHEFFSKYK 359

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           +YLQ+      A+    W G VES++RQL   +E    G    HP+
Sbjct: 360 HYLQIIASGQTAESQKKWSGAVESKVRQLVSKLEL-VDGIELAHPF 404


>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 554

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 175/409 (42%), Positives = 260/409 (63%), Gaps = 3/409 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS A PT  +   N  L K L + G +E++   +KR +VL  +++I +++V 
Sbjct: 4   QTYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++  +  S+ M  DA   IFT+GSYRLGV+GPG+DID L V P +V+R  DFF +  ++
Sbjct: 64  RVSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESL 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  E+ E+  V DA VP++K +F G+SIDL+ A +    V  DL + D ++L ++DE 
Sbjct: 123 LRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL LVP    F   LRC+K WA++R +Y+N+ GF GGV WA+L AR+
Sbjct: 183 DLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +Y+ W WP PV+L  I++  L   VW+PR    D++H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL- 372
           TPAYP M +++N+++ST  +++ +F+ G  I  ++ + K +W  LF  + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLC 362

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
            V     +A++ L W G VES+LR L   +E  T G    HPY   + D
Sbjct: 363 VVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410


>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
 gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
 gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
          Length = 599

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 175/412 (42%), Positives = 260/412 (63%), Gaps = 6/412 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT P+S A PT A++  N +L   L     +E+  E E+R+Q L  I+++  ++
Sbjct: 5   PVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRVTVEF 64

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE---DFFF 128
           VK ++R +G S   ++ A   IFT+GSYRLGV+GPG+DID L VGP +VS E+   DF  
Sbjct: 65  VKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPP 124

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           +L N +A +  + +L PV DA VP++K +  G+SIDL+YA +    V  +LD+ +  +L 
Sbjct: 125 VLEN-MAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+
Sbjct: 184 GLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S +V +FFR+   W+WP PV+L  I+E  L   VW+P+    DK H
Sbjct: 244 LVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPAYP M +++NVS ST  V++ + + G  I + + + +  W+ LF  + FF + 
Sbjct: 304 LMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQD 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           Y+ YL +   + + D    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 364 YKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
          Length = 599

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 175/412 (42%), Positives = 260/412 (63%), Gaps = 6/412 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT P+S A PT A++  N +L   L     +E+  E E+R+Q L  I+++  ++
Sbjct: 5   PVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRVTVEF 64

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE---DFFF 128
           VK ++R +G S   ++ A   IFT+GSYRLGV+GPG+DID L VGP +VS E+   DF  
Sbjct: 65  VKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPP 124

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           +L N +A +  + +L PV DA VP++K +  G+SIDL+YA +    V  +LD+ +  +L 
Sbjct: 125 VLEN-MAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+
Sbjct: 184 GLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S +V +FFR+   W+WP PV+L  I+E  L   VW+P+    DK H
Sbjct: 244 LVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPAYP M +++NVS ST  V++ + + G  I + + + +  W+ LF  + FF + 
Sbjct: 304 LMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQD 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           Y+ YL +   + + D    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 364 YKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
          Length = 500

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/450 (38%), Positives = 273/450 (60%), Gaps = 40/450 (8%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           G+T+P+S+ GPTE D+   +EL+K L+  GLY+S+E  + RE VL  + ++ K +V+ + 
Sbjct: 13  GITRPLSLEGPTEYDIHLTKELQKTLMLYGLYDSEETAKLREHVLKSLDEMTKKFVQFVY 72

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +G+S +    A   IFT+GSYRLGV+   ++                           
Sbjct: 73  ERQGFSKEQAVKAGGKIFTYGSYRLGVNAKASN--------------------------- 105

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
            E++ ++ PV DA VPV+KFK+ G+ ID + A ++   + ED+D+ D  +L  +D  ++R
Sbjct: 106 -EQIKDITPVTDAFVPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEILRGLDAHSIR 164

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           S+NG RVAD IL LVPN++ F  TLRC+K WA R+ VYSNV GFLGGV WA+LVARVCQL
Sbjct: 165 SINGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAWAILVARVCQL 224

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE--AELGFSVWDPRKNRRDKTHHMPIIT 314
           YP+A  S L+S+FF + T W WP+PVML A+++  A      W+P+ N  D++H MP+IT
Sbjct: 225 YPHASASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVIT 284

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           P+YP M +++NV+ ST R++  + +    I +++    A+W  LFE + FF+ YR YLQ+
Sbjct: 285 PSYPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAHSFFKMYRQYLQI 344

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMG 434
            +VA N +  L W G VE+RLRQL + +E   +  +Q HP+   + +T      C +   
Sbjct: 345 TVVADNYELQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGFSET------CLYRTS 397

Query: 435 LQRKPGEVVQEGQQFDIRGSVEEFKLSINM 464
             +     V +G+++D   ++ + K+ +++
Sbjct: 398 TDK---VTVSQGEKYDNNRTIGKMKMEVDV 424


>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
          Length = 630

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 198/552 (35%), Positives = 308/552 (55%), Gaps = 40/552 (7%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +G+T  +S+ GPTE D     +L+K +   G +++ +    R QVL ++ ++ KD+V+++
Sbjct: 2   FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
            +     + +  +    I+TFGSYRLGVH    DID LCV P +V+R   FF I  ++L 
Sbjct: 62  AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLK 120

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISR-LVVREDLDISDMSVLNDVDEPT 194
           + E VTE + + +A VP++K  FDG+ +D+L+A ++    V ED D+ ++ +L +++E  
Sbjct: 121 KTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKC 180

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           VRSLNGCRV D+IL LVPN+E F  TLR +K WA+R+G+Y N  GF+GGV WA+LVAR C
Sbjct: 181 VRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTC 240

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDPRKNRRDKTHHMPI 312
           QLYPNA PS L+ +FF +++ W WP PV L   ++A  GF+  VWDPR N  D++H MPI
Sbjct: 241 QLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPI 300

Query: 313 ITPAYPCMNSSYNVSTSTLRVM----MDQFQYGNTICEEV----ELNKAQWSALFEPYLF 364
           ITPAYP  NS++NVS STL VM     D ++    I ++     E N   W+ LF    F
Sbjct: 301 ITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDF 360

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT-- 422
           F  Y++++ +   A   +    W G VES +R+L   +ER+ Y  +      H  VD+  
Sbjct: 361 FNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILI-----AHVNVDSIE 415

Query: 423 -------SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK-------LSINMYMFW 468
                    P   C +F+GL     EV       ++   ++ F        +S N Y   
Sbjct: 416 LDPAEEGQSPRYVCRWFLGLSFHRCEV---KPNINLTSDIQRFTDLLHQAAISHNNYT-- 470

Query: 469 KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPES 528
            P M +   +++R  +  ++ PE   RT     + + R S+   + Q+    K+ ++ ES
Sbjct: 471 -PDMRVEARYVKRHNLVKFLTPE-LARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESES 528

Query: 529 VDQDGPEKRQSI 540
            +    E ++ +
Sbjct: 529 KNSQSKENKEKL 540


>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 554

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 175/409 (42%), Positives = 259/409 (63%), Gaps = 3/409 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS A PT  +   N  L K L + G +E++   +KR +VL  +++I +++V 
Sbjct: 4   QTYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++  +  S+ M  DA   IFT+GSYRLGV+GPG+DID L V P +V+R  DFF +  ++
Sbjct: 64  RVSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESL 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  E+ E+  V DA VP++K +F G+SIDL+ A +    V  DL + D ++L ++DE 
Sbjct: 123 LRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +RSLNG RV D+IL LVP    F   LRC+K WA++R +Y+N+ GF GGV WA+L AR+
Sbjct: 183 DLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV +++V +FF +Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL- 372
           TPAYP M +++N+++ST  +++ +F+ G  I  ++ + K +W  LF  + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLC 362

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
            V     +A++ L W G VES+LR L   +E  T G    HPY   + D
Sbjct: 363 VVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410


>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
          Length = 600

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 175/412 (42%), Positives = 260/412 (63%), Gaps = 6/412 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT P+S A PT A++  N +L   L     +E+  E E+R+Q L  I+++  ++
Sbjct: 5   PTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEF 64

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE---DFFF 128
           VK ++R +G S   ++ A   IFT+GSYRLGV+GPG+DID L VGP +VS E+   DF  
Sbjct: 65  VKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPP 124

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           IL N +A    + +L  V DA+VP++K +  G+SIDL+YA +    V  +LD+ +  +L 
Sbjct: 125 ILEN-MAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPPNLDLRNKDLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+
Sbjct: 184 GLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S +V +FFR+   W+WP PV+L  I+E  L   VW+P+    DK H
Sbjct: 244 LVARVCQLYPQATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPAYP M +++NVS ST  V++ + + G  I +++ + +  W+ LF  + FF + 
Sbjct: 304 LMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQD 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           Y+ YL +   + + D    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 364 YKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
          Length = 501

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 176/482 (36%), Positives = 293/482 (60%), Gaps = 24/482 (4%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGV+  I++ GPT  D++ N +L   L    L+E+++   KRE +L  + ++  +++  +
Sbjct: 14  YGVSTSITLDGPTPEDIEANEQLLTLLRSLNLFETEKGLRKRELILASLNRLLHNFIHSV 73

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
             ++G  +    D +A + TFGSYRLGV GP +DIDALC+ P  ++R  DFF + ++ILA
Sbjct: 74  CIMQGLDEDDANDVSARLLTFGSYRLGVIGPDSDIDALCLCPQRITRN-DFFTVFYDILA 132

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
               V+++  V DA+ P++K  +D + ID+L+A +    +  +L I D  +L ++D+ T 
Sbjct: 133 NHPNVSKIHAVADAYTPLIKLVYDDIDIDILFAILPIPTISPNLSILDDDILRNLDDITA 192

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RS+NGCRVA  +L  VPN  +F  TLR +K WA++RG+YSN+ G+LGGV WA+L ARVCQ
Sbjct: 193 RSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVAWAILTARVCQ 252

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTHHM 310
           LYPN +P+ ++ +FF+VY +W W  PV++  I +       + F VWDP+ N +D+ H M
Sbjct: 253 LYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQDRLHLM 312

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           PIITPA+P MNS++NV+ +T RVM+++F+  + + +    ++  W+ L EP   F  +++
Sbjct: 313 PIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELLKTQ--SQMTWNDLLEPANIFNEFKH 370

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 430
           +L + +VA++      W GW+ESR+R L   +E   + +L+  P+PH          +  
Sbjct: 371 FLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTELR--PWPHSITMEDPDWTNSK 428

Query: 431 F-FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK------PGMEICVSHIRRKQ 483
           + F+GL         E  QFDIR  ++EFK   N+   W+        +++ + ++++ Q
Sbjct: 429 WIFIGLSYNK----TEESQFDIRTPIKEFK---NLIFSWQELTSYESKVDVRIEYMKKSQ 481

Query: 484 IP 485
           +P
Sbjct: 482 LP 483


>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
 gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
          Length = 513

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 190/496 (38%), Positives = 280/496 (56%), Gaps = 32/496 (6%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           MSS      +G+++PISM  P + D+  N+ L + L     +E  EE  +R +VL ++  
Sbjct: 1   MSSTMSAPTFGISQPISMDFPNKKDLLLNKSLTETLKSFNCFEPSEETSQRVKVLNKLNF 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           + K W+  LT  R   D    DA   +  FGSYRLGVH  G+DID L + P +V+R +  
Sbjct: 61  LVKKWIHLLTITRIPMDV---DAGGKLIAFGSYRLGVHSSGSDIDTLVLAPRHVTRLD-- 115

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
            FIL N                A VP+M FK+ G+ IDLL+A +    V +++D+SD ++
Sbjct: 116 -FILEN--------------FTAFVPIMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNI 160

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L ++D  +VRSLNGCRVA+Q+LK VPN   FC TLR +K WAK  G+YSN  GF GG+ W
Sbjct: 161 LKNLDPESVRSLNGCRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAW 220

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI----DEAELGFSVWDPRKN 302
           A+LVAR CQLYPNA PS L+ + F V++ W WP+PV+L  +    D   L   VWDPR+N
Sbjct: 221 AILVARTCQLYPNAAPSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRN 280

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITP++P  NS++NVS STL+V+ ++ +    ICE V+  KA W  L E  
Sbjct: 281 YADRLHLMPIITPSFPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLEET 340

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
            FF  YR+ + V I A    +   + G+ ESR+RQL  ++ER++  ++Q           
Sbjct: 341 NFFCKYRHLIAVSINAEKEKEDTDFAGFFESRIRQLVQLLERNS--QVQIAQVNTRKFKA 398

Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG-MEICVSHIRR 481
                   +F+GL     E +Q  +  D+   ++ FK  I      K G ++I  +++++
Sbjct: 399 PFSPGKSQWFIGL-----EFIQAAKNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKK 453

Query: 482 KQIPPYVFPEGYKRTR 497
            ++  Y+     KR +
Sbjct: 454 SKLITYISAAELKRGK 469


>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
 gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
          Length = 600

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 174/410 (42%), Positives = 258/410 (62%), Gaps = 6/410 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+GVT PIS A PT +++  N +L   L +   +ES  E E+R+Q L  I+++  ++VK
Sbjct: 7   RQWGVTPPISTALPTPSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRVTVEFVK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G S   ++ A   IFT+GSYRLGV+GPG+DID L VGP +VS E DFF     +
Sbjct: 67  VVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPL 125

Query: 134 LAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L +M     + +L PV DA VP++K +  G+SIDL+YA +    V  +LD+ +  +L  +
Sbjct: 126 LEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+LV
Sbjct: 186 DEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+   W WP PV+L  I+E  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           PIITPAYP M +++NVS ST  V++ + + G  I +++ L +  W+ LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            YL +   +   +    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 366 YYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSSIEV-AHPFPKGF 414


>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
          Length = 594

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/412 (42%), Positives = 260/412 (63%), Gaps = 6/412 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT P+S A PT A++  N +L   L     +E+  E E+R+Q L  I+++  ++
Sbjct: 5   PTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEF 64

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE---DFFF 128
           VK ++R +G S   ++ A   IFT+GSYRLGV+GPG+DID L VGP +VS E+   DF  
Sbjct: 65  VKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPP 124

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           IL N +A    + +L  V DA+VP++K +  G+SIDL+YA +    V  +LD+ +  +L 
Sbjct: 125 ILEN-MAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+
Sbjct: 184 GLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S +V +FFR+   W+WP PV+L  I+E  L   VW+P+    DK H
Sbjct: 244 LVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPAYP M +++NVS ST  V++ + + G  I +++ + +  W+ LF  + FF + 
Sbjct: 304 LMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQD 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           Y+ YL +   + + D    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 364 YKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
 gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
          Length = 594

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/412 (42%), Positives = 260/412 (63%), Gaps = 6/412 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT P+S A PT A++  N +L   L     +E+  E E+R+Q L  I+++  ++
Sbjct: 5   PTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRVTVEF 64

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE---DFFF 128
           VK ++R +G S   ++ A   IFT+GSYRLGV+GPG+DID L VGP +VS E+   DF  
Sbjct: 65  VKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFEDFFSDFPP 124

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           IL N +A    + +L  V DA+VP++K +  G+SIDL+YA +    V  +LD+ +  +L 
Sbjct: 125 ILEN-MAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+
Sbjct: 184 GLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S +V +FFR+   W+WP PV+L  I+E  L   VW+P+    DK H
Sbjct: 244 LVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPAYP M +++NVS ST  V++ + + G  I +++ + +  W+ LF  + FF + 
Sbjct: 304 LMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQD 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           Y+ YL +   + + D    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 364 YKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 643

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 207/601 (34%), Positives = 312/601 (51%), Gaps = 52/601 (8%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           M+S PP K  GVT PI+   P   D++ +  L   LV    +ES +E + RE++L  I Q
Sbjct: 1   MTSNPPVKFLGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQ 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           +   +V +++   G S+++  +A   I+T GSYRLGVHGPG+DID +CV P ++ RE  F
Sbjct: 61  LVAKFVHDVSIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-F 119

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F    ++L     VTE+  V  A VPVMK    G+ +DLL+A ++     + LDI    +
Sbjct: 120 FGEFQDMLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEI 179

Query: 187 LNDVDEPTVRSLN-GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           L  VD+ + RSLN G RV D IL LVP+V  F T LR ++ WAKRRG+YSNV GF GGV 
Sbjct: 180 LRGVDDASQRSLNAGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVA 239

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNR 303
           WALL AR+CQLYP A P+ +V +FF +Y  W WP PV+L  ID     +  SVW+P+ +R
Sbjct: 240 WALLTARICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDR 299

Query: 304 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-ELNKAQWSALFEPY 362
           RD+ H MP+ITPAYP M S++N+++ST+ ++  +      I +E+ +   + W  LFE  
Sbjct: 300 RDQAHRMPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKV 359

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP-------- 414
            FF  Y+ Y+QV   A+ +D +  W G VESR+R L   +E +T   +  HP        
Sbjct: 360 DFFSMYKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRV 418

Query: 415 ----------------YPHEYVDTS---------KPCAHCAFFMGLQRKPGEVVQEGQQF 449
                              E +D +         +     +FF+GL+ +       G+  
Sbjct: 419 FYCLTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVL 478

Query: 450 DIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           ++    ++F  +  N   + +  M + +   +R ++P YVFP+G  +++      QQ  S
Sbjct: 479 NLFYPSKKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNGS 538

Query: 509 ENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEP 568
            +        G             GP KR        ++  P    P+ V    G++  P
Sbjct: 539 GDAGMNDGSEG------------QGPSKRTKSEQTLINNFEPQQQLPNGVPVPNGADPVP 586

Query: 569 V 569
           +
Sbjct: 587 L 587


>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
          Length = 698

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 208/561 (37%), Positives = 297/561 (52%), Gaps = 86/561 (15%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKRE------------------ 58
           G+T P+ +A P+  D++ +R+LE+ L +  L+E++EE + R+                  
Sbjct: 10  GMTPPLLIADPSPRDVELSRQLEQTLRDHDLFETEEEAQTRQLLLCSSDLIDLFSLTVAL 69

Query: 59  ------------------------------QVLGRIRQIAKDWVKELTRLRGYSDQMVED 88
                                          VL R+  I K WV ++   +   ++M  D
Sbjct: 70  GRSTFVALPSSSPVPPPPPPSPLLPMLHSHMVLARLDSIVKQWVIQVLTAK---NEMPPD 126

Query: 89  A--NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPV 146
                 +FTFGSYRLGVHG GADID LC+ P  V+R+ DFF  L  +L E  E +EL PV
Sbjct: 127 TEPGGKVFTFGSYRLGVHGRGADIDTLCIAPRGVTRD-DFFQSLVELLREQSETSELTPV 185

Query: 147 LDAHVPVMKFKFDG-----------LSIDLLYASI-SRLVVREDLDISDMSVLNDVDEPT 194
             A  P++  KF G           L IDLL+A +   L V E+L++ D ++L + D  T
Sbjct: 186 TGAFTPIITLKFSGVDNRSLASSAPLKIDLLFAELPGVLSVSENLNVMDNAILRNCDMAT 245

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           VRS+NG RVA+ IL+LVP+ ++F   LR +K WA  RGVYSN  GFLGG+ WA+LVAR C
Sbjct: 246 VRSVNGSRVANYILQLVPDRDNFRMALRAIKLWANNRGVYSNKLGFLGGIAWAILVARTC 305

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTHHMPII 313
           QLYP +  S +V+RFFRV+  W WP PV L A++E   L    W+P  N  D  H MPII
Sbjct: 306 QLYPKSSASTIVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPII 365

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP MNS++NVS STLRVM ++F  G  +  ++E+ K  W  LFE   FF  Y+ Y+Q
Sbjct: 366 TPAYPSMNSTHNVSMSTLRVMTEEFARGMQVTLDIEVGKVGWPVLFEKNNFFTRYKTYIQ 425

Query: 374 VDI-VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-----VDTSKPCA 427
           +      N D+   W+G+VES+LR     +E    G    HPYP  +      ++ +P  
Sbjct: 426 ISARTEENQDEHRQWEGFVESKLRMFLQWLE-SAPGVDYVHPYPKTFSQTDTTESGQPVY 484

Query: 428 HCAFFMGLQRKPGEVVQEGQQ---FDIRGSVEEFKLSI---NMYMFWKPGMEICVSHIRR 481
              F+ G+  K     QEG      ++   V +F+ +I   N      P +++ V  ++R
Sbjct: 485 LTIFYFGMMFKK----QEGTDPRVIELGNIVRDFREAIKNQNASFVNNPRVDLVVLPMKR 540

Query: 482 KQIPPYVFPEGYK--RTRHPR 500
            Q+P  VF  G +   T+ P+
Sbjct: 541 PQLPENVFEGGVRPAPTKRPK 561


>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
          Length = 528

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 203/520 (39%), Positives = 299/520 (57%), Gaps = 25/520 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGV++PIS+A PT  D+     L + L   G +E+KEE  KR QVL  +    K W++
Sbjct: 14  KIYGVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQ 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++  R  + +  E A   + +FGSYRLGVH  G DID++ + P  VSR  DFF  L +I
Sbjct: 74  GISSARLPNGKFFE-AGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDI 131

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L     V  L  V  A VP+M F+F G+ +DLL+A +   V+ + +D++D ++L ++D+ 
Sbjct: 132 LIRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQE 191

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNG RVA+++L+LVPN E FC TLR +K WAK  GVYSN  GF GG+ WALLVAR 
Sbjct: 192 SVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVART 251

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDPRKNRRDKTH 308
           CQLYPNA PS LV + F V++ W +P+P++LC       D   L    W   +N  D+ H
Sbjct: 252 CQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWG--RNHADRFH 309

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPA+P  NS++NVS ST+ V+  +      IC ++   K  W  LFE   F+  Y
Sbjct: 310 LMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFDGKCDWKFLFEEVNFYSQY 369

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
           ++++ + + A   +   ++ G++ESR RQL    ER+  G    H  P +   TSK  A 
Sbjct: 370 KHFVVMKLDAKKEETENSYGGFLESRFRQLIGAFERNR-GIKMAHLNPKKCQPTSK--AQ 426

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIP 485
             +F+GL+    +VV   +  D+   ++ FK ++N+      G   +E+ +S+ +R Q+ 
Sbjct: 427 SLWFIGLEF--DDVV---KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYAKRSQLI 481

Query: 486 PYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 525
            Y+ P   K+    R    + S+E+  E     GLKRK D
Sbjct: 482 KYMPPAELKKG---RFFVAKGSAEDNKE--NAGGLKRKCD 516


>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
          Length = 599

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 193/555 (34%), Positives = 294/555 (52%), Gaps = 68/555 (12%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  KQ+G T PIS A PT +++  N  L   L     +E+  E EKR Q+L  I+++  +
Sbjct: 4   PQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK + R +G S   ++ +   IF +GSYRLGV+GPG+DID L VGP +V+ E DFF   
Sbjct: 64  FVKTVGRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDF 122

Query: 131 HNILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
              L  M   + + +L PV DA+VP++K +  G+SIDL++A +    +  DLD+ +  +L
Sbjct: 123 PPTLERMAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+ R +YSNV GF GGV WA
Sbjct: 183 RGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++NVS ST  V++ + + G  I E++ L + +WS LF  + FF +
Sbjct: 303 HLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSK 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------- 419
            Y+ YL +   + + +    W G VE++LR L + +++     +  HP+P  +       
Sbjct: 363 DYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIDV-AHPFPKGFERVHSCK 421

Query: 420 ------------------------VDTSKPCAHCA------------------------- 430
                                    D +   AH A                         
Sbjct: 422 DEKEIEVAKSGLTRFQVKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEDSNNHTL 481

Query: 431 ----FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIP 485
               +++GL+ KP  V    +  DI      FK     +  ++PG+ ++ ++H+R   +P
Sbjct: 482 HTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQPGINDVTITHVRNYDLP 540

Query: 486 PYVFPEGYKRTRHPR 500
             VF  G  R   P+
Sbjct: 541 EDVFHPGETRPVRPK 555


>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
          Length = 579

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 176/413 (42%), Positives = 256/413 (61%), Gaps = 6/413 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP +Q+GVT PIS   PT  ++  N +L   L     +ES  E E+R+QVL  I+++  +
Sbjct: 4   PPVRQWGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L VGP +V  + DFF   
Sbjct: 64  FVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIID-DFFSDF 122

Query: 131 HNILAEMEE---VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             IL +M     + ++ PV DA+VP++K +  G+SIDL++A +    +  +LD+ +   L
Sbjct: 123 PPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA
Sbjct: 183 RGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++NVS ST  V++ + Q G  I +++ L + +W  LF  + FF +
Sbjct: 303 HLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTK 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            Y+ YL +   +   +    W G VES++R L   ++R     +  HP+P  +
Sbjct: 363 DYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKATIAI-AHPFPKGF 414


>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
 gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
 gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
          Length = 580

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 176/415 (42%), Positives = 258/415 (62%), Gaps = 6/415 (1%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           S PP +Q+GVT PIS A PT  ++  N +L   L     +ES  E E+R+QVL  ++++ 
Sbjct: 2   STPPVRQWGVTPPISTALPTPEELAANDDLISELKAQNNFESPAETERRKQVLQLLQRVT 61

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
            ++VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L VGP +V   +DFF 
Sbjct: 62  HEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHV-LIDDFFS 120

Query: 129 ILHNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
               +L +M     + ++ PV DA VP++K +  G+SIDL++A +    V  +LD+ +  
Sbjct: 121 DFPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNND 180

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
            L  +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV 
Sbjct: 181 YLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVA 240

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           WA+LVARVCQLYP+A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D
Sbjct: 241 WAMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGD 300

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYP M +++N+S ST  V++ + Q G  I +++ L +  W+ LF  + FF
Sbjct: 301 RFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFF 360

Query: 366 -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            + Y+ YL +   +   +    W G VES++R L   ++R     +  HP+P  +
Sbjct: 361 TQDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGF 414


>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
 gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
          Length = 599

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 197/554 (35%), Positives = 294/554 (53%), Gaps = 68/554 (12%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT PISM  PT  ++  N +L   L     +E   E E+R+Q L  I+++  ++
Sbjct: 5   PTRQWGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPAETERRQQTLQLIQKVVIEF 64

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK + R +G S  ++E A   IFT+GSYRLGV+GPG+DID L V P +V   +DFF    
Sbjct: 65  VKTVGRRKGLSPAVLEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHV-LIDDFFSDFP 123

Query: 132 NILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
            IL  M     + ++ PV DA VP++K +F G+S+DL++A +    +  +LD+ +   L 
Sbjct: 124 PILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNNDYLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +D+  VRSLNG RV DQIL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+
Sbjct: 184 GLDDKEVRSLNGTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S++V +FFR+ T W WP PV+L  I++  L   VW+P+    D+ H
Sbjct: 244 LVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPAYP M +++N+S ST  V++ + Q G  I +++   +  W+ LF  + FF + 
Sbjct: 304 LMPIITPAYPSMCATHNISLSTKAVILRELQRGGDIVDKIFAKQLTWNDLFTRHTFFSKD 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH---------- 417
           Y+ YLQ+   +   +    W G VES+LR L   ++R     +  HP+P           
Sbjct: 364 YKYYLQITASSKTKEADSVWSGLVESKLRHLVGALDRKNIIAV-AHPFPKGFERIHVVKD 422

Query: 418 ---------------------EYVDTSKPCAHCA-------------------------- 430
                                E  D +K  AH A                          
Sbjct: 423 DAEAEQVKNGSTKYQAQGTKTETTDQTKDPAHTAAAENGAQDIQVPDPETKGAVDSRTIY 482

Query: 431 ---FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPP 486
              +++GL+ KP E     +  DI      FK +   +  ++ G+ ++ ++H+R   +P 
Sbjct: 483 TTTYYIGLELKPLE-PGASRSLDISTDANIFKSTCTSWQGFQEGINDLSITHVRSFDLPD 541

Query: 487 YVFPEGYKRTRHPR 500
            VF  G  R   P+
Sbjct: 542 DVFEPGETRPVRPK 555


>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
          Length = 587

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 176/403 (43%), Positives = 256/403 (63%), Gaps = 7/403 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS+A PT  D + N  L K L   G +ES+    KR +VL  ++++ + +V  +
Sbjct: 8   YGVTPPISLANPTPKDNELNDLLIKELKLRGSFESEAATRKRVKVLNTLQKLTETFVYNV 67

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +R +  S+ M  DA   +FTFGSYRLGV+GP +DIDAL V P Y++RE DFF     +L 
Sbjct: 68  SRSKNMSEAMARDAGGKLFTFGSYRLGVYGPSSDIDALVVFPRYITRE-DFFTEFEKLLR 126

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           E  E+ E+  V +A VP++K +FDG+SIDL++A +    + +DL ++D ++L ++DE  +
Sbjct: 127 ERPELEEINSVREAFVPIIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKNIDEKDL 186

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           R+LNG RV D+IL LVP    F   LR +K WA++R +Y+NV GF GGV WA+LVAR+CQ
Sbjct: 187 RALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAMLVARICQ 246

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV S +V +FF++Y+ W WP PV+L  I++  L   VW+P+    D+ H MP+ITP
Sbjct: 247 LYPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPVITP 306

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N++ ST ++++D+FQ G TI   +      W  L + + FF  Y+ YL V 
Sbjct: 307 AYPSMCATHNITASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDFFHRYKFYLCV- 365

Query: 376 IVAANA---DDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
            VAA     ++ L + G  ES+LR L   +E    G    HPY
Sbjct: 366 -VAATKSTYEEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPY 406


>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
          Length = 547

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 180/414 (43%), Positives = 265/414 (64%), Gaps = 11/414 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS+A  T  ++  N EL K L   G +ES+   ++R +VL  ++++ +++V  ++
Sbjct: 7   GVTPPISVANATPKEISLNDELIKELKIRGSFESENATKRRVEVLNIMQKLTEEFVYIVS 66

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           + +  SD M +DA   IFTFGSYRLGV+G G+DID L V P +V+R+ DFF +  ++L +
Sbjct: 67  KRKNMSDGMAKDAGGKIFTFGSYRLGVYGQGSDIDTLVVVPKHVNRQ-DFFDVFVDLLKK 125

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
             E+ E+  V DA VP++K +F G+SIDL++A +    V  DL + + ++L ++DE  +R
Sbjct: 126 RSELEEITSVPDAFVPIIKMEFGGISIDLIFAKLDIPRVPRDLTLDNKNLLKNLDEKDLR 185

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNG RV D+IL LVP    F   LRC+K WA++R +Y+NV GF GGV WA+LVAR+CQL
Sbjct: 186 SLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQL 245

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPN V +++V +FF++Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+ITPA
Sbjct: 246 YPNTVSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPA 305

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP M +++N++ ST  V+M +F  G  +  ++    A W  LFE + FF  Y+ YL   I
Sbjct: 306 YPSMCATHNITKSTKDVIMSEFNRGVNVMAQIHAGTASWGLLFERHRFFFQYKFYLC--I 363

Query: 377 VAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY--PHE--YVDTS 423
           VAA   ++ + L W G +ES++R L   +E  T G    HPY  P E  YV TS
Sbjct: 364 VAATKSSSAEHLKWSGMIESKVRLLVQKLEL-TEGITLAHPYVKPFENSYVGTS 416


>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
          Length = 908

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 177/405 (43%), Positives = 258/405 (63%), Gaps = 7/405 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT  IS AGP+  + + N  L   L   G +ES+    KR +VL  ++Q+ +++V 
Sbjct: 360 KTYGVTPAISTAGPSSEETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVY 419

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +   + M +DA   IFTFGSYRLGV+GPG+DID L V P +++RE DFF +   I
Sbjct: 420 SVSKSKNMDEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKI 478

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  E+ E+Q V DA VP++K +FDG+SIDL+ A +    V  +L + D ++L ++DE 
Sbjct: 479 LRQRPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEK 538

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL LVP    F   LR +K WA+RR VY NV GF GGV WA+LVAR+
Sbjct: 539 DLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARI 598

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV ++++S+FF +   W WP PV+L  I++  L   VW+PR    DK H MP+I
Sbjct: 599 CQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVI 658

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +FQ G+ I  E+     +WS LF  + FF  Y+ YL 
Sbjct: 659 TPAYPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLT 718

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           V  +AA   ++++   + G VES+LR L   +E +    L  HP+
Sbjct: 719 V--IAATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 760


>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
          Length = 523

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 182/492 (36%), Positives = 290/492 (58%), Gaps = 11/492 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YG+T+P++  GP+  D++ + E+   L    L+E+ E  ++RE VL  + ++ + +V+
Sbjct: 11  KRYGITEPVTTQGPSNDDLKASEEITALLKSYNLFETDEGKQRRELVLEALNRLLQQFVR 70

Query: 74  -ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            +  + +G S+      +  + TFGSYRLG+  P +DID LC+ P  V+RE  FF   + 
Sbjct: 71  RQAKKNQGISESEANTISGKLLTFGSYRLGIVAPDSDIDVLCLCPKCVTRES-FFSDFYI 129

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
            L ++E +++LQ V DA+ PV+K  +  +SID+L+A++    V  ++++ D ++L ++++
Sbjct: 130 SLTKVEAISKLQAVPDAYTPVIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMND 189

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            TVRS+NGCRVA  IL  VPN  +F  TLR +K WA RR +YS V G+LGGV WA+L AR
Sbjct: 190 STVRSINGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTAR 249

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKT 307
           VCQLYPN VP+ L+ +FFRVY++W W  PV LC I +       + F VWDP+ N  D+ 
Sbjct: 250 VCQLYPNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQ 309

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-FFE 366
           H MPIITPA+P MNS++NV+ +T RVM D+ +    I +     K Q   L       F 
Sbjct: 310 HLMPIITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEEDIFS 369

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
           SY+++L +++  A+      W+GW+ SR+R L   +E     +++  P   ++ D+    
Sbjct: 370 SYKHFLIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNTQIRPLPGFFKFEDSEWEY 429

Query: 427 AHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQ 483
           A  AFF        +  Q  +  DIR S++ FK  IN +      K  +++ + H++  Q
Sbjct: 430 ASSAFFALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRHVKSSQ 489

Query: 484 IPPYVFPEGYKR 495
           +P YV  +  K+
Sbjct: 490 LPDYVQAKNSKK 501


>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
          Length = 527

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 205/520 (39%), Positives = 299/520 (57%), Gaps = 25/520 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGV++PIS+A PT  D+     L + L   G +E KEE  KR QVL  +    K W++
Sbjct: 13  KIYGVSQPISLAQPTPKDLSLTCSLLQELKSFGSFEEKEETTKRIQVLQFLNATVKKWIQ 72

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++  R  + +  E A   + +FGSYRLGVH  G DID++ + P  V+R  DFF  L +I
Sbjct: 73  SISATRLPNGKFFE-AGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRS-DFFTSLKDI 130

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L     V  L  V  A VP+M F+F G+ +DLL+A +   V+ E +D++D ++L ++D+ 
Sbjct: 131 LLRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQE 190

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNG RVA+++L+LVPN E FC TLR +K WAK  GVYSN  GF GG+ WALLVAR 
Sbjct: 191 SVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVART 250

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDPRKNRRDKTH 308
           CQLYPNA PS LV + F V++ W +P+P++LC       D   L    W   +N  D+ H
Sbjct: 251 CQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWG--RNHADRFH 308

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPA+P  NS++NVS ST+ V+  +      IC +V   K  W  LFE   F+  Y
Sbjct: 309 LMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLFEELNFYSQY 368

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
           ++++ + + A   +   ++ G++ESRLR L    ER+   KL  H  P +   TSK  A 
Sbjct: 369 KHFVVLKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSK--AQ 425

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIP 485
             +F+GL+    EVV   +  D+   ++ FK ++N+     PG   +E+ +S+++R Q+ 
Sbjct: 426 SLWFIGLEF--DEVV---KNMDLTREIDNFKWNLNVQAKQIPGFEDVELDISYVKRSQLI 480

Query: 486 PYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 525
            Y+     K+ R        + S + N+   G  LKRK D
Sbjct: 481 KYLPAAELKKGRF----HVAKGSSDDNKENAGV-LKRKCD 515


>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
          Length = 526

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 206/529 (38%), Positives = 304/529 (57%), Gaps = 29/529 (5%)

Query: 7   MSSPPPP----KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           MSS  P     K YGV++PIS+A PT  D+     L + L   G +E+KEE  KR QVL 
Sbjct: 1   MSSATPAATTTKIYGVSQPISLANPTPQDLSLTCSLLQELKSFGSFEAKEETTKRIQVLQ 60

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
            +    K W++ ++  R  + +  E A   + +FGSYRLGVH  G DID++ + P  V+R
Sbjct: 61  FLNVTVKKWIQGISAARLPNGKFFE-AGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTR 119

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
             DFF  L +IL     V  L  V  A VP+M F+F G+ +DLL+A +   V+ + +D++
Sbjct: 120 T-DFFTSLKDILIRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLT 178

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D ++L ++D+ +VRSLNG RVA+++L+LVPN E FC TLR +K WAK  GVYSN  GF G
Sbjct: 179 DDNLLKNMDQKSVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFG 238

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVW 297
           G+ WA+LVAR CQLYPNA PS LV + F V++ W +P+P++LC       D   L    W
Sbjct: 239 GITWAILVARTCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCW 298

Query: 298 DPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA 357
              +N  D+ H MPIITPA+P  NS++NVS ST+ V+  +      IC ++   K+ W  
Sbjct: 299 G--RNHADRFHLMPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDIFEGKSDWKF 356

Query: 358 LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
           LFE   F+  Y++++ + + A   +   ++ G++ESRLR L    ER+   KL  H  P 
Sbjct: 357 LFEEVNFYSQYKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPK 415

Query: 418 EYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEI 474
           +   TSK  A   +F+GL+    EVV   +  D+   ++ FK ++N+      G   +E+
Sbjct: 416 KCQPTSK--AQSIWFIGLEFD--EVV---KNMDLTREIDNFKWNLNVQAKQIAGFEEVEL 468

Query: 475 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRK 523
            +S+++R Q+  Y+     K+    R    + SSE+  E     GLKRK
Sbjct: 469 DISYVKRSQLIKYLPAAELKKG---RFFVAKGSSEDNKE--NAGGLKRK 512


>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
          Length = 555

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 177/403 (43%), Positives = 257/403 (63%), Gaps = 7/403 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS+A  T  + + N  L K L   G +ES+   +KR +VL  ++ + +++V ++
Sbjct: 6   YGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKV 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  +  S+ M  D    IFTFGSYRLGV+GPG+DID L V P +VSR  DFF + + +L 
Sbjct: 66  SIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLK 124

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
              E+ E+ PV DA VP++K +F G+SIDL++A +    V  DL + D ++L ++DE  +
Sbjct: 125 GRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDL 184

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           R+LNG RV D+IL+LVP    F   LRC+K WA++R VY N+ GF GGV WA+LVAR+CQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV +++V +FF +Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITP 304

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N+++ST +V++ +FQ G  +  ++ + K  WS L E + FF  Y+ YL   
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC-- 362

Query: 376 IVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           IVAA      + L + G VES+LR L   +E    G    HPY
Sbjct: 363 IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404


>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
 gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
           adenylyltransferase a
 gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
 gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
          Length = 555

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 177/403 (43%), Positives = 257/403 (63%), Gaps = 7/403 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS+A  T  + + N  L K L   G +ES+   +KR +VL  ++ + +++V ++
Sbjct: 6   YGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKV 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           +  +  S+ M  D    IFTFGSYRLGV+GPG+DID L V P +VSR  DFF + + +L 
Sbjct: 66  SIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLK 124

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
              E+ E+ PV DA VP++K +F G+SIDL++A +    V  DL + D ++L ++DE  +
Sbjct: 125 GRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDL 184

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           R+LNG RV D+IL+LVP    F   LRC+K WA++R VY N+ GF GGV WA+LVAR+CQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           LYPNAV +++V +FF +Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITP 304

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP M +++N+++ST +V++ +FQ G  +  ++ + K  WS L E + FF  Y+ YL   
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC-- 362

Query: 376 IVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           IVAA      + L + G VES+LR L   +E    G    HPY
Sbjct: 363 IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404


>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
 gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
          Length = 551

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 177/405 (43%), Positives = 258/405 (63%), Gaps = 7/405 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGVT  IS AGP+  + + N  L   L   G +ES+    KR +VL  ++Q+ +++V 
Sbjct: 3   KTYGVTPAISTAGPSSEETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVY 62

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +   + M +DA   IFTFGSYRLGV+GPG+DID L V P +++RE DFF +   I
Sbjct: 63  SVSKSKNMDEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKI 121

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +  E+ E+Q V DA VP++K +FDG+SIDL+ A +    V  +L + D ++L ++DE 
Sbjct: 122 LRQRPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEK 181

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL LVP    F   LR +K WA+RR VY NV GF GGV WA+LVAR+
Sbjct: 182 DLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARI 241

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV ++++S+FF +   W WP PV+L  I++  L   VW+PR    DK H MP+I
Sbjct: 242 CQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVI 301

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +V++ +FQ G+ I  E+     +WS LF  + FF  Y+ YL 
Sbjct: 302 TPAYPSMCATHNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLT 361

Query: 374 VDIVAA---NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           V  +AA   ++++   + G VES+LR L   +E +    L  HP+
Sbjct: 362 V--IAATKGSSEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 403


>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
 gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
 gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
           [Aspergillus nidulans FGSC A4]
          Length = 601

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 198/558 (35%), Positives = 297/558 (53%), Gaps = 69/558 (12%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           ++P   +Q+GVT PIS   PT  ++  N +L   L     +ES  E E+R+QVL  ++++
Sbjct: 3   AAPSTTRQWGVTPPISTTLPTAQELSANDDLIAELKLQNNFESPAETERRKQVLQLLQRV 62

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
             ++VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L +GP +V  + DFF
Sbjct: 63  TIEFVKVVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVLGPKHVVID-DFF 121

Query: 128 FILHNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDM 184
                +L  M     V ++ PV DA VP++K +  G+SIDL++A +    +  +LD+ + 
Sbjct: 122 AEFPPLLESMAPQGAVEKITPVPDAFVPLIKLELSGISIDLIFARLIVPSIPLNLDLKNN 181

Query: 185 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
             L  +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV
Sbjct: 182 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 241

Query: 245 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 304
            WA+LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    
Sbjct: 242 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 301

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 364
           D+ H MPIITPAYP M +++N+S ST  V++ + Q G  I +++   +A W+ LF+ + F
Sbjct: 302 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIWAKQATWNDLFKKHSF 361

Query: 365 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH------ 417
           F + Y+ YL V   +   +    W G VES++R L   ++R     +  HP+P       
Sbjct: 362 FTNDYKYYLGVTASSRTKEAESVWSGLVESKVRHLVGALDRKPTIAV-AHPFPKGFERIH 420

Query: 418 -------------------------EYVDTSKPCAHCA---------------------- 430
                                    E  D  K  AH A                      
Sbjct: 421 IVSNEEEAEAVKNGSLKYQDKGTKTETTDEIKDAAHQAAAQSGREDTDVPGAANNTAAND 480

Query: 431 --------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRR 481
                   +++GL+ KP E     +  DI    + FK     +  ++PG+ ++ ++H+R 
Sbjct: 481 GRIIYTTTYYIGLELKPVE-PGASRSLDISSDAQFFKSMCTSWPGYQPGINDLSITHVRN 539

Query: 482 KQIPPYVFPEGYKRTRHP 499
             +P  +F EG  R   P
Sbjct: 540 YDLPEDLFQEGEARPTRP 557


>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
          Length = 587

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 173/408 (42%), Positives = 261/408 (63%), Gaps = 5/408 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  +QYGVT PIS+A PT+ +++RN+ L + L + G +E  EE +KR  VL  ++ + + 
Sbjct: 4   PARQQYGVTPPISVATPTDKEVERNQALIEELKKQGSFEGAEESQKRVLVLNTLQNLTEG 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK++   +G  + +++++   IFT+GSYRLGV+ PG+DID L V P++++R  DFF  L
Sbjct: 64  FVKKVCANKGMPEHIIKNSGGKIFTYGSYRLGVYAPGSDIDTLLVTPAHITRH-DFFATL 122

Query: 131 HNILAEMEEVTE-LQPVLDAHVPVMKFKFDGLSIDLLYASISRL-VVREDLDISDMSVLN 188
             +L E+    E L  V DA VP++KFK   +SIDL++A ++ +  V +D+ +SD  +L 
Sbjct: 123 PAMLQELVPPPEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKELLR 182

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
             DE  +R LNG RV D+IL LVP    F   LR +K WA+RR +Y+NV GF GGV WA+
Sbjct: 183 GCDEVNLRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAM 242

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVAR+CQLYP AV ++++S+FF++   W WP PV+L  I++  L   VW+P+    D+ H
Sbjct: 243 LVARICQLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGH 302

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES- 367
            MPIITPAYP M +++N++ ST  +++ + ++   I + + +    W  LFE + FF + 
Sbjct: 303 LMPIITPAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFFTNG 362

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           YR YL V   A + D LL W G VES+LR L + +E     KL  HP+
Sbjct: 363 YRYYLSVVAAAKDKDTLLGWSGLVESKLRHLVMKLEILETIKL-AHPF 409


>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 599

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 192/552 (34%), Positives = 294/552 (53%), Gaps = 68/552 (12%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+G T PIS A PT +++  N  L   L     +E+  E EKR Q+L  I+++  ++VK
Sbjct: 7   KQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVEFVK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            + R +G S   ++ +   IF +GSYRLGV+GPG+DID L VGP +V+ E DFF      
Sbjct: 67  TVGRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDFPPT 125

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A  + + +L PV DA+VP++K +  G+SIDL++A +    +  DLD+ +  +L  +
Sbjct: 126 LERLAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+ R +YSNV GF GGV WA+LV
Sbjct: 186 DEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           PIITPAYP M +++NVS ST  V++ + + G  I E++ L + +WS LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---------- 419
            YL +   + + +    W G VE++LR L + +++    ++  HP+P  +          
Sbjct: 366 YYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIEV-AHPFPKGFERVHRCKDEK 424

Query: 420 ---------------------VDTSKPCAHCA---------------------------- 430
                                 D +   AH A                            
Sbjct: 425 EIEVAKSGLTRFQVKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEESNNHTLHTT 484

Query: 431 -FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYV 488
            +++GL+ KP  V    +  DI      FK     +  ++PG+ ++ ++H+R   +P  V
Sbjct: 485 TYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQPGINDLTITHVRNYDLPEDV 543

Query: 489 FPEGYKRTRHPR 500
           F  G  R   P+
Sbjct: 544 FHPGETRPVRPK 555


>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
 gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
          Length = 552

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 174/407 (42%), Positives = 258/407 (63%), Gaps = 3/407 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS++ PT  + + N  L K L   G YES+    KR +VL  ++++ + +V 
Sbjct: 4   QSYGVTPPISLSDPTSKEKELNDLLIKELKLRGSYESESATLKRVEVLTTLQKLTEQFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  R  S  M +DA   IFTFGSY+LGV+GP +DIDAL V P +V+R+ DFF +   I
Sbjct: 64  EVSLQRNMSQGMAKDAGGKIFTFGSYKLGVYGPSSDIDALVVVPRHVTRD-DFFTVFEKI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L   +E+ E+  V +A VP++K +F G+SIDLL+A +    V  DL + D ++L ++DE 
Sbjct: 123 LRGRQELEEINCVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA++R +Y+NV GF GGV WA+LVAR+
Sbjct: 183 DMRALNGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV ++++ +FF++Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL- 372
           TPAYP M +++N+++ST +++M +F  G  I   V   +  WS L E + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDFFHKYKFYLC 362

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            V    +N ++   + G VES+LR L   +E+   G    HPY   +
Sbjct: 363 VVAATKSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSF 408


>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
           8797]
          Length = 576

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/413 (42%), Positives = 256/413 (61%), Gaps = 13/413 (3%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T P+S+ GPT  + + N  L + L     +ES+ E   R ++L  ++ + + +V 
Sbjct: 5   KVYGITGPVSVVGPTAPENKLNDLLIQELKSENSFESEAETATRVKILEVLQALTEKFVY 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ R  SD M  D    +FTFGSYRLGVHGPG+DID L V P +VSR+ DFF +   +
Sbjct: 65  TVSKRRNMSDGMARDGGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFDVFDKL 123

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E  E+ E+ PV DA VP++K KF G+SIDLL A +    V + L +SD ++L ++DE 
Sbjct: 124 LRERPELDEIAPVPDAFVPIIKIKFSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNLDEK 183

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA+RR VY NV GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARI 243

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA  +++++RFF++Y+ W+WP PV+L  I++  L   VW+P+   +D++H MP+I
Sbjct: 244 CQLYPNACSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST  +++ + Q G  I  ++  NK  W+ LF+ + FF  Y+ YL 
Sbjct: 304 TPAYPSMCATHNITESTKSIILQELQRGIQITNDIFTNKKTWNDLFKRHDFFYKYKFYLT 363

Query: 374 VDIVA--ANADD---------LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           +         DD          L W G VES+ R L + +E    G    HPY
Sbjct: 364 ITASTREHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLEA-LEGIKVAHPY 415


>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
          Length = 544

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 172/408 (42%), Positives = 255/408 (62%), Gaps = 7/408 (1%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P+Q G+T P+S A PT+A+ Q    L + + +  L+ES+ + EKR  VL  ++ I +++V
Sbjct: 6   PRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITEEFV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K + R +   + +V +A   IFT+GS+RLGV+GPG+DID L V P  VSREE +F +  +
Sbjct: 66  KRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YFELFPD 124

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVLN 188
           +L EM     + +L PV +A VP++KF++ G+SIDL++A I  L  +   L ++D ++L 
Sbjct: 125 LLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLT 184

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +RSLNG RV D IL LVP    F T LR +K WA+RR +Y+N+ GF GGV WA+
Sbjct: 185 GLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAM 244

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S ++ +FFR+ + W+WP PV+L AI   +L   VW+PR  + D  H
Sbjct: 245 LVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYH 304

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITP+YP M +++N++ ST  ++  +   G  I + +   KA W  LF  + FF ++
Sbjct: 305 LMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKN 364

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           Y+ YL V   +   +  L W G VES++R L   +E      L  HP+
Sbjct: 365 YKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPF 411


>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
 gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
          Length = 599

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 177/413 (42%), Positives = 252/413 (61%), Gaps = 6/413 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP +Q+GVT PIS   PT  ++  N +L   L     +ES  E E R+  L  I+++  +
Sbjct: 4   PPVRQWGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L VGP +V  + DFF   
Sbjct: 64  FVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVID-DFFSDF 122

Query: 131 HNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             +L  M     V ++ PV DA VP++K +F G+SIDL+YA +    V  +LD+ +   L
Sbjct: 123 PPVLERMAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA
Sbjct: 183 RGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++NVS ST  V++ + Q G  I +++ L +  W+ LF  + FF  
Sbjct: 303 HLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTR 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            Y+ YL +   +   +    W G VES++R L   ++R +   +  HP+P  +
Sbjct: 363 DYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKSTIAV-AHPFPKGF 414


>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
 gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
          Length = 609

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 177/413 (42%), Positives = 252/413 (61%), Gaps = 6/413 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP +Q+GVT PIS   PT  ++  N +L   L     +ES  E E R+  L  I+++  +
Sbjct: 4   PPVRQWGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK ++R +G S   VE A   IFT+GSYRLGV+GPG+DID L VGP +V  + DFF   
Sbjct: 64  FVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVID-DFFSDF 122

Query: 131 HNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             +L  M     V ++ PV DA VP++K +F G+SIDL+YA +    V  +LD+ +   L
Sbjct: 123 PPVLERMAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA
Sbjct: 183 RGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++NVS ST  V++ + Q G  I +++ L +  W+ LF  + FF  
Sbjct: 303 HLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTR 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            Y+ YL +   +   +    W G VES++R L   ++R +   +  HP+P  +
Sbjct: 363 DYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKSTIAV-AHPFPKGF 414


>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 590

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 200/577 (34%), Positives = 299/577 (51%), Gaps = 81/577 (14%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP +Q+GVT PIS   PT+ ++  N +L   L     +E   E E+R+QVL  ++++  +
Sbjct: 4   PPVRQWGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +V+ ++R +G S   VE +   IFT+GSYRLGV+GPG+DID L VGP +V   +DFF   
Sbjct: 64  FVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHV-LIDDFFAEF 122

Query: 131 HNILAEMEE---VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             +L  M     + ++ PV DA VP++K +  G+SIDL++A +    +  +LD+ +   L
Sbjct: 123 PPVLERMASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPSIPMNLDLKNNDYL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA
Sbjct: 183 RGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++N+S ST  V++ + Q G  + +++ + +  W  LF  + FF  
Sbjct: 303 HLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDMVDKIFMKQLSWHDLFARHTFFTH 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------- 419
            Y+ YL +   +   +    W G VES+LR L   ++R     +  HP+P  +       
Sbjct: 363 DYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPIIAV-AHPFPKGFERVHLIK 421

Query: 420 ------------------------VDTSKPCAHCA------------------------- 430
                                    D +K  AH A                         
Sbjct: 422 NEQDMEAVKNGSTQHQAKGTKTAMTDETKDAAHQAAVQNTLENAEVPGPAEGTVEGTVDN 481

Query: 431 ---------FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG-----MEICV 476
                    +++GL+ KP E  Q  +  DI    + FK +   +    PG     ME+ V
Sbjct: 482 EGQTVYTTTYYIGLELKPLEPGQ-SRSLDISTDSQIFKSTCTSW----PGYQEEVMELAV 536

Query: 477 SHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNE 513
           +H+R   +P  VF  G  R   P+    +RS   G +
Sbjct: 537 THVRSFDLPDDVFQPGETRASRPKKKVTKRSETAGQK 573


>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
          Length = 573

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 172/408 (42%), Positives = 255/408 (62%), Gaps = 7/408 (1%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P+Q G+T P+S A PT+A+ Q    L + + +  L+ES+ + EKR  VL  ++ I +++V
Sbjct: 6   PRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSITEEFV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K + R +   + +V +A   IFT+GS+RLGV+GPG+DID L V P  VSREE +F +  +
Sbjct: 66  KRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YFELFPD 124

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVLN 188
           +L EM     + +L PV +A VP++KF++ G+SIDL++A I  L  +   L ++D ++L 
Sbjct: 125 LLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLT 184

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +RSLNG RV D IL LVP    F T LR +K WA+RR +Y+N+ GF GGV WA+
Sbjct: 185 GLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAM 244

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S ++ +FFR+ + W+WP PV+L AI   +L   VW+PR  + D  H
Sbjct: 245 LVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYH 304

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITP+YP M +++N++ ST  ++  +   G  I + +   KA W  LF  + FF ++
Sbjct: 305 LMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKN 364

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           Y+ YL V   +   +  L W G VES++R L   +E      L  HP+
Sbjct: 365 YKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPF 411


>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
          Length = 528

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 202/520 (38%), Positives = 299/520 (57%), Gaps = 25/520 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YGV++PIS+A PT  D+     L + L   G +E+KEE  KR QVL  +    K W++
Sbjct: 14  KIYGVSQPISLAQPTPKDISLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNATVKKWIQ 73

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++  R  + +  E A   + +FGSYRLGVH  G DID++ + P  VSR  DFF  L +I
Sbjct: 74  GISASRLPNGKFFE-AGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRA-DFFTSLKDI 131

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L     V  L  V  A VP+M F+F G+ +DLL+A +   V+ E +D++D ++L ++D+ 
Sbjct: 132 LIRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQE 191

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSLNG RVA+++L+LVPN E FC TLR +K WAK  GVYSN  GF GG+ WA+LVAR 
Sbjct: 192 SVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARA 251

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCA-----IDEAELGFSVWDPRKNRRDKTH 308
           CQLYPNA PS LV + F V++ W +P+P++LC       D   L    W   +N  D+ H
Sbjct: 252 CQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFH 309

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITPA+P  NS++NVS ST+ V+  +     TIC +V   K  W  LFE   F+  Y
Sbjct: 310 LMPIITPAFPEQNSTHNVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLFEEVNFYSQY 369

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
           ++++ + + A   +   ++ G++ESRLR L    ER+   KL  H  P +   TSK  + 
Sbjct: 370 KHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSK--SQ 426

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIP 485
             +F+GL+    EVV   +  D+   +  FK ++N+      G   +E+ +S+++R  + 
Sbjct: 427 SLWFIGLEF--DEVV---KNMDLTREINNFKWNLNVQAKQIAGFEDVELDISYVKRSHLI 481

Query: 486 PYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKD 525
            Y+     K+ R     ++  S +N    +   G+KRK D
Sbjct: 482 KYLPAAELKKGRF--FVAKASSDDNK---ENAGGMKRKCD 516


>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
 gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
          Length = 599

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 173/410 (42%), Positives = 251/410 (61%), Gaps = 6/410 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+GVT PISM  PT  ++  N +L   L     +E   E E+R+Q L  I+++  ++VK
Sbjct: 7   RQWGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPSETERRQQTLQLIQRVVIEFVK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            + R +G S   +E A   IFT+GSYRLGV+GPG+DID L V P +V  + DFF     I
Sbjct: 67  TVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVMID-DFFSDFPPI 125

Query: 134 LAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L  M     + ++ PV DA VP++K +F G+SIDL++A +    V  +LD+ +   L  +
Sbjct: 126 LERMSPPGAIEKMTPVPDAFVPIIKLEFSGISIDLIFARLILPSVPLNLDLKNNDYLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D+  VRSLNG RV DQIL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+LV
Sbjct: 186 DDKEVRSLNGTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+ T W WP PV+L  I++  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           PIITPAYP M +++N+S ST  V++ + Q G  + +++   +  W+ LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNISLSTKAVILRELQRGGDMVDKIFAKQLTWNDLFTRHTFFSKDYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            YLQ+   +   +    W G VES+LR L   ++R     +  HP+P  +
Sbjct: 366 YYLQITASSKTKEAESVWSGLVESKLRHLVGALDRKNIIAI-AHPFPKGF 414


>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
          Length = 643

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 198/565 (35%), Positives = 308/565 (54%), Gaps = 53/565 (9%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +G+T  +S+ GPTE D     +L+K +   G +++ +    R QVL ++ ++ KD+V+++
Sbjct: 2   FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
            +     + +  +    I+TFGSYRLGVH    DID LCV P +V+R   FF I  ++L 
Sbjct: 62  AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLK 120

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISR-LVVREDLDISDMSVLNDVDEPT 194
           + E VTE + + +A VP++K  FDG+ +D+L+A ++    V ED D+ ++ +L +++E  
Sbjct: 121 KTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKC 180

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           VRSLNGCRV D+IL LVPN+E F  TLR +K WA+R+G+Y N  GF+GGV WA+LVAR C
Sbjct: 181 VRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTC 240

Query: 255 -------------QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS--VWDP 299
                        QLYPNA PS L+ +FF +++ W WP PV L   ++A  GF+  VWDP
Sbjct: 241 QVGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDP 300

Query: 300 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVM----MDQFQYGNTICEEV----ELN 351
           R N  D++H MPIITPAYP  NS++NVS STL VM     D ++    I ++     E N
Sbjct: 301 RFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPN 360

Query: 352 KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQ 411
              W+ LF    FF  Y++++ +   A   +    W G VES +R+L   +ER+ Y  + 
Sbjct: 361 TRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEYILI- 419

Query: 412 CHPYPHEYVDT---------SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFK--- 459
                H  VD+           P   C +F+GL     EV       ++   ++ F    
Sbjct: 420 ----AHVNVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEV---KPNINLTSDIQRFTDLL 472

Query: 460 ----LSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ 515
               +S N Y    P M +   +++R  +  ++ PE   RT     + + R S+   + Q
Sbjct: 473 HQAAISHNNYT---PDMRVEARYVKRHNLVKFLTPE-LARTLKLSKSKEGRKSKTNAQNQ 528

Query: 516 TGSGLKRKKDPESVDQDGPEKRQSI 540
           +    K+ ++ ES +    E ++ +
Sbjct: 529 SNGNTKKAEESESKNSQSKENKEKL 553


>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
 gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
          Length = 599

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 171/413 (41%), Positives = 256/413 (61%), Gaps = 6/413 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP +Q+GVT PIS   PT  ++  N +L   L     +ES  E E+R++VL  ++++  +
Sbjct: 4   PPVRQWGVTPPISTVLPTPDELAANDDLIAELKRQNNFESPAETEQRKEVLKLLQRVTIE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK ++R +G S+  VE A   IFT+GSYRLGV+GPG+DID L VGP  V   +DFF   
Sbjct: 64  FVKVVSRKKGLSEAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKQV-LIDDFFSDF 122

Query: 131 HNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             +L  M     + ++ PV DA+VP++K +  G+SIDL++A +    +  +LD+ +   L
Sbjct: 123 PPVLERMAPPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPINLDLKNNDYL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA
Sbjct: 183 RGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++NVS ST  V++ + Q G  + +++ + +  W+ LF  + FF +
Sbjct: 303 HLMPIITPAYPSMCATHNVSMSTKNVILRELQRGGDMVDKIFMKQLTWNDLFARHSFFTK 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            Y+ YL++   +   +    W G VES++R L   ++R     +  HP+P  +
Sbjct: 363 DYKYYLRITAASTTKEADSVWSGLVESKIRHLVGALDRKPTIAV-AHPFPKGF 414


>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
 gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
          Length = 404

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 177/384 (46%), Positives = 245/384 (63%), Gaps = 15/384 (3%)

Query: 31  DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDAN 90
           D++ + +LE  L    ++E+ EE  +RE+VLG I +  + W +  +  +G  + +  D  
Sbjct: 2   DLKLSADLEARLHLENVFEAPEECTRREEVLGEINEALQQWCRARSASKGIEEDL--DPR 59

Query: 91  ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF----------FILHNILAEMEEV 140
             ++TFGSYRLGVHGP ADID LC+GP +++R EDFF          F L   +      
Sbjct: 60  CNLYTFGSYRLGVHGPAADIDTLCIGPRHLTRAEDFFGSEWTGYEGSFYLE--MKNHPGT 117

Query: 141 TELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVLNDVDEPTVRSLN 199
            ++  V DA VP +K  F G  ID+ Y  +   V V EDLD+   ++L ++D+ +V+SLN
Sbjct: 118 DQVVAVPDAVVPELKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLN 177

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRVADQ+L+LVPN + F   LR L+ WAK RGVYSNV G+ GGVN ALLVARVCQLYPN
Sbjct: 178 GCRVADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPN 237

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A PSMLV  FF+++  W+W  PVML  I +   G  VWD R N+ ++   M IITPAYP 
Sbjct: 238 AAPSMLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPA 297

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
            NS++NV+ STL V+ ++F+ G  +C EV ++K +W +L+EP  FF  +++YLQV I A 
Sbjct: 298 QNSTFNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPFFTMHKHYLQVTIAAV 357

Query: 380 NADDLLAWKGWVESRLRQLTLMIE 403
           + DD   W+GWV SRLR L   +E
Sbjct: 358 SEDDFKKWEGWVHSRLRMLVQGVE 381


>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
          Length = 598

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 169/407 (41%), Positives = 253/407 (62%), Gaps = 7/407 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T P+S A PT+++ Q +  L + L     YES  + +KR + L  ++ I ++++K
Sbjct: 7   KPLGITAPLSTALPTDSENQASSALIEELKRQNNYESVVDTQKRTEALKALQAITEEFIK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++++ +G  D +   A+  IFT+GS+RLGV GPG+DID L VGP +V+R+ DFF    ++
Sbjct: 67  QVSKAQGLPDSVANSASGKIFTYGSFRLGVFGPGSDIDTLVVGPKHVTRD-DFFKYFPDL 125

Query: 134 LAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRL-VVREDLDISDMSVLND 189
           L  M     +T+L PV+D+ VP++KF++ G+SIDL+++ I+ L  + + L + D ++L  
Sbjct: 126 LVTMSPPGAITDLTPVVDSFVPIIKFEYAGISIDLIFSRIAVLNQIPQSLTLQDSNLLRG 185

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +DE  +RSLNG RV D IL LVP    F T LR +K WA+RR +Y+N+ GF GGV WA+L
Sbjct: 186 LDEADLRSLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGGVAWAML 245

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VARVCQLYP A  S +V +FFR+   W+WP PV+L  I    L   VW+PR  + D  H 
Sbjct: 246 VARVCQLYPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHL 305

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESY 368
           MPIITPAYP M +++N++ ST  ++  + + G  I +++   K QW  LF  + FF E Y
Sbjct: 306 MPIITPAYPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTFFTEGY 365

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           + YL V   +   +    W G VES++R L L +E      L  HP+
Sbjct: 366 KYYLSVISASTTREAQNIWGGLVESKIRLLVLSLEGHDSIAL-AHPF 411


>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
          Length = 604

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 172/396 (43%), Positives = 255/396 (64%), Gaps = 9/396 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS A PTEA+   N+ + + L +   +ES  E +KR QVL +++ I  ++VK++ 
Sbjct: 9   GVTPPISTALPTEAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEFVKQVA 68

Query: 77  RLRGY-SDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           R R   S+ +++DA   IFT+GS+RLGV+GPG+DID L V P YV+R+ D+F I   +L 
Sbjct: 69  RKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRD-DYFEIFPGLLQ 127

Query: 136 EM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLY---ASISRLVVREDLDISDMSVLND 189
           +M   + +T+L  V DA VP++KF+F G+SIDL++   AS+ +L       ++D ++L  
Sbjct: 128 KMTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRG 187

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +DE  +RSLNG RV D+I+ LVP    F   LR +K WA+RR +Y+N+ GF GGV WA+L
Sbjct: 188 LDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAML 247

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VARVCQLYP A  S++V++FF +   W WP PV+L A++E  L   VW+P+  R D+ H 
Sbjct: 248 VARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHL 307

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-Y 368
           MPIITPAYP M +++N++ S + V+  + Q G  I + V L+K  W  LF  + FF S Y
Sbjct: 308 MPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGY 367

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           + Y+ V   +   +    W G+VES++R L   +E+
Sbjct: 368 KYYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQ 403


>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
 gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
          Length = 583

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 194/579 (33%), Positives = 313/579 (54%), Gaps = 53/579 (9%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+G+T P+S A PT A++  N  L   L     +E+  E EKR+Q L  ++++  +++K
Sbjct: 7   RQWGITPPLSSALPTPAELTENDALIAELKLQNNFETPSETEKRKQTLHLLQRVTIEFIK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +G S   ++ +   IFT+GSYRLGV+GPG+DID L V P +V RE DFF     +
Sbjct: 67  VVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPTV 125

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A  + + ++ PV DA VP++K +  G+SIDL++A +    V  +LD+ +  +L  +
Sbjct: 126 LEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+LV
Sbjct: 186 DEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           PIITPAYP M +++NVS ST  V++ + + G  + +++ + + +WS LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNVSMSTKSVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTL----------MIERDTYG--KLQCHPYPH 417
            YL ++  +   +    W G VES+LR L             I+    G  K Q      
Sbjct: 366 YYLSINSTSTTKEAQAIWSGLVESKLRHLGFERVHICKTDAEIDAVKAGSMKYQADDTKT 425

Query: 418 EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEVVQEGQQ 448
              D +    H A                             +++GL+ KP       + 
Sbjct: 426 ATTDETNDPTHVAAAENANENVAIAEAEKPAEENKYTVYTTTYYIGLELKP-LAPGASRS 484

Query: 449 FDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRS 507
            DI      FK +   +  ++PG+ ++ +SH+R   +P  VF  G  R   P+    +++
Sbjct: 485 LDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRPKKKVVKKA 544

Query: 508 SENGNEYQTGSGLKRKKDPES-----VDQDGPEKRQSIS 541
            ++ ++ +T   +  ++ PES     V Q+G   + +I+
Sbjct: 545 EQSVSQKRTIDAVDGQELPESASKRHVSQNGMVTQATIA 583


>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
          Length = 620

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 179/431 (41%), Positives = 264/431 (61%), Gaps = 24/431 (5%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS+  PTEA+ + +  L + L     +ES  + EKR  VL  +++I  ++V+
Sbjct: 5   QNYGVTPPISVTLPTEAENRASDALLEELRRQKTFESPSDTEKRHAVLKSLQEICNEFVR 64

Query: 74  ELTRLRG-YSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           ++ R R   +D ++++A   +FT+GS+RLGV+GPG+DID L V P YV+RE D+F    +
Sbjct: 65  KVAREREPKNDILIKNARGKVFTYGSFRLGVYGPGSDIDTLIVAPKYVTRE-DYFNYFPD 123

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD-ISDMSVLN 188
           +L  M     +T+L  V DA VP++KF++ G+SIDL+++ I +  +  D D + D S+L 
Sbjct: 124 LLVSMAPPGAITDLTVVKDAFVPIIKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY+N+ GF GGV WA+
Sbjct: 184 GLDEAELRSLNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S++V++FF V   WRWP PV+L  ID   L   VW+P+  + D  H
Sbjct: 244 LVARVCQLYPKATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES- 367
            MP+ITPAYP M +++N++ S++ ++  + + G  I E++ + K  WS LF  + FF S 
Sbjct: 304 LMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSG 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA 427
           YR Y+ V   + + +    W G+VES++R L          KL+ HP        S   A
Sbjct: 364 YRYYISVISASKDKEAHKIWSGYVESKVRMLV--------QKLEQHP--------SIALA 407

Query: 428 HCAFFMGLQRK 438
           H AF  G  R+
Sbjct: 408 H-AFNKGYDRR 417


>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
 gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
          Length = 649

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 173/465 (37%), Positives = 277/465 (59%), Gaps = 47/465 (10%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PI++  PTE D+++  ++ + L    L+E+++  +KRE+VLG I ++  ++V E
Sbjct: 92  KYGVSDPITLNYPTEEDLKKANDVVELLKSYNLFETEQALKKRERVLGMINKLFHEFVVE 151

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +G +++  +  +  ++TFGSYRLGV  P +DID + + P  ++RE  FF   +  L
Sbjct: 152 ISISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 210

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE-DLDISDMSVLNDVDEP 193
            +   V +LQ + + + P+++F +D + IDLL A++    +++    + +  +L ++DE 
Sbjct: 211 QQDRNVRKLQSLPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 270

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNG RVAD IL  VP+ +HF  TLR +K WAK RG+YSN+ GFLGG++WALL A++
Sbjct: 271 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKI 330

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTH 308
           CQLYPN   S L+ +FFRVY++W W  PV++  I++         FSVWDP KN +DK H
Sbjct: 331 CQLYPNYNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLH 390

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN----------------- 351
            MPIITPA+PCMNS++NV+  T  +++D+F+  + I   +E N                 
Sbjct: 391 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVT 450

Query: 352 --------------------KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 391
                                + W+ + +P   F SY+++L + I+A N     +WKGW+
Sbjct: 451 PVSAPTTSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWI 510

Query: 392 ESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 435
           ES++R L   +E  T  +L+  PYP  YV       +C +FF+GL
Sbjct: 511 ESKIRLLFKKLE--TINELKIRPYPKFYVYKKDKFYYCSSFFIGL 553


>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
            thermophila]
 gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
            thermophila SB210]
          Length = 1765

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 167/417 (40%), Positives = 266/417 (63%), Gaps = 26/417 (6%)

Query: 22   ISMAGP-----TEADMQRN--RELEKFL-VEAGLY---ESKEEDEKREQVLGRIRQIAKD 70
            IS+  P     T    Q+N  +++++ L V  G Y   E++EE +++++ L ++RQI +D
Sbjct: 1110 ISLQNPHMPIDTSVHKQQNSEKQMQQILDVLEGEYKYSETEEETKQKDEKLKQLRQIIRD 1169

Query: 71   WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
            W++ +     +    +     L+F FGSY+L V+   +DID +C+ P++V R++ FF  L
Sbjct: 1170 WIQAIAEENNH---QLTFGGELLF-FGSYKLKVNSHDSDIDTVCLVPNFVDRDQHFFGDL 1225

Query: 131  HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
             NIL   +EVTEL P+ +A VP++K KF G+  DL +A        E++D++   +L  +
Sbjct: 1226 VNILQNRKEVTELFPIKEASVPIIKMKFSGILFDLSFARAPPQYNGENIDLTSNQMLLSM 1285

Query: 191  DEPTVRSLNGCRVADQILKL--VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            DE + RS NGCRVA+ +++   + N E+F  TL+C+K WA  RG+YSN+ G+L G+ W +
Sbjct: 1286 DERSYRSFNGCRVAEWLIRKDNIQNYENFKITLKCIKLWATNRGIYSNIIGYLSGIGWTI 1345

Query: 249  LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDE----AELGFSVWDPRKNR 303
            LVA++CQLYPN  P+ L+ RFF +Y+ W+W + PV +  I E     +L    W P    
Sbjct: 1346 LVAKICQLYPNYPPNQLIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPEFRD 1405

Query: 304  RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 363
            R+    M IITP +PCMN+++NVS +TLR++ +Q QYGN I  +++ N+  +S LF+P+ 
Sbjct: 1406 RNS---MMIITPCFPCMNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEKTFSDLFKPFN 1462

Query: 364  FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEY 419
            FF+ Y+++LQ++IVA N +D + WKG VESRLR+LT + E+  + KL Q HPYP+ +
Sbjct: 1463 FFKRYKHFLQINIVATNKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519


>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
          Length = 372

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 167/370 (45%), Positives = 241/370 (65%), Gaps = 3/370 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS+  PT  D + N  L K L   G YES+    KR +VL  ++++ +D+V 
Sbjct: 4   QTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDFVY 63

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E++  +  +  M +DA   IFTFGSYRLGV+GP +DIDAL V P +V+RE DFF +   I
Sbjct: 64  EVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFEKI 122

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L    E+ E+  V +A VP++K +F G+SIDLL+A +    V  DL + D ++L ++DE 
Sbjct: 123 LRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEK 182

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R+LNG RV D+IL+LVP    F   LR +K WA++R VY+NV GF GGV WA+LVAR+
Sbjct: 183 DMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARI 242

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNAV ++++ +FF++Y+ W WP PV+L  I++  L   VW+PR    D+ H MP+I
Sbjct: 243 CQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVI 302

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++N++ ST +++M++F  G  I  E+   +  WS L E + FF  Y+ YL 
Sbjct: 303 TPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLC 362

Query: 374 VDIVAANADD 383
           V  VAA   +
Sbjct: 363 V--VAATKSN 370


>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
 gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
          Length = 597

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 170/413 (41%), Positives = 251/413 (60%), Gaps = 6/413 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  +Q+GVT PIS   PT+ ++  N +L   L     +E   E E+R+QVL  ++++  +
Sbjct: 4   PSVRQWGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +V+ ++R +G S   VE +   IFT+GSYRLGV+GPG+DID L VGP +V   +DFF   
Sbjct: 64  FVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHV-LIDDFFAEF 122

Query: 131 HNILAEMEE---VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             IL  M     + ++ PV DA VP++K +  G+SIDL++A +    +  +LD+ +   L
Sbjct: 123 PPILQRMASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPAIPMNLDLKNNDYL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  VRSLNG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA
Sbjct: 183 RGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 242

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 243 MLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRF 302

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++N+S ST  V++ + Q G  I +++ + +  W  LF  + FF  
Sbjct: 303 HLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFMKQLSWQDLFARHTFFTH 362

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            Y+ YL +   +   +    W G VES+LR L   ++R     +  HP+P  +
Sbjct: 363 DYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPIVAV-AHPFPKGF 414


>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
           knowlesi strain H]
 gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
           [Plasmodium knowlesi strain H]
          Length = 637

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 172/458 (37%), Positives = 276/458 (60%), Gaps = 40/458 (8%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PIS+  PTE D+++  ++ + L    LYE++   +KRE+VLG I ++  ++V E
Sbjct: 89  KYGVSDPISLNYPTEEDLRKGNDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVE 148

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +G +++  +  +  ++TFGSYRLGV  P +DID + + P  ++RE  FF   +  L
Sbjct: 149 ISISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 207

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE-DLDISDMSVLNDVDEP 193
            + + V +LQ + + + P+++F +D + IDLL A++    +++    + +  +L ++DE 
Sbjct: 208 QQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 267

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNG RVAD IL  VP+ +HF  TLR +K WAK RG+YSN+ GFLGG++WALL A++
Sbjct: 268 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKI 327

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTH 308
           CQLYPN   S L+ +FFRVY++W W  PV++  I++         FSVWDP KN +DK H
Sbjct: 328 CQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLH 387

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-------------- 354
            MPIITPA+PCMNS++NV+  T  +++D+F+  + I   +E+N                 
Sbjct: 388 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVT 447

Query: 355 ----------------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
                           W+ + +P   F +Y+++L + I+A +     +WKGW+ES++R L
Sbjct: 448 PVSAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLL 507

Query: 399 TLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 435
              +E  T  +L+  PYP  YV       +C +FF+ L
Sbjct: 508 FKKLE--TINELKIRPYPKFYVYQKDKFDYCSSFFIAL 543


>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1294

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 169/399 (42%), Positives = 245/399 (61%), Gaps = 8/399 (2%)

Query: 12   PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
            PP+Q+GVT  IS + PT+ +++ N +L + L     +ES EE +KR  VL R+++I +D+
Sbjct: 686  PPRQWGVTPAISHSMPTDQEIKVNNDLIEELKAMNSFESAEESQKRVDVLKRLQRITEDF 745

Query: 72   VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
            VK++   +  ++     A   +FT+GSYRLGV GPG+DID L V P  V+RE DFF    
Sbjct: 746  VKQVYTSKNQNELATNSAGGKVFTYGSYRLGVVGPGSDIDTLVVAPKLVTRE-DFFKFYP 804

Query: 132  NILAEMEE------VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
             +L  + +      + EL PV DA VP++KF   G+SIDL++  +    V  D+ + D +
Sbjct: 805  PLLKALNKPNEPQIIEELAPVPDAFVPIIKFVMSGISIDLIFCRLGVTQVPADMSLEDKN 864

Query: 186  VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
            +L  +DE  +RSLNG RV D+IL LVP    F   LR +K WAK + +Y NV GF GGV 
Sbjct: 865  LLRGLDEKELRSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGVA 924

Query: 246  WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
            WA+LVAR+CQLYP+AV +++VS+FFR+   W WP PV+L  I++  L   VW+PR    D
Sbjct: 925  WAMLVARICQLYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPSD 984

Query: 306  KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
            K H MPIITPAYP M S++N++ ST   ++ +      I + +   K  W  LFE + FF
Sbjct: 985  KNHLMPIITPAYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFERHTFF 1044

Query: 366  -ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
             + Y+ YL V+  A   +  + W G VES++R L + +E
Sbjct: 1045 TKDYKYYLAVNASAKEQEASVKWSGLVESKIRHLVMKLE 1083


>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
 gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
          Length = 616

 Score =  337 bits (865), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 170/430 (39%), Positives = 258/430 (60%), Gaps = 23/430 (5%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR------------- 57
           P  KQ+GVT PIS   PT A++  N  L   L     +E+  E E+R             
Sbjct: 4   PQAKQWGVTPPISTVLPTPAELTENDNLIAELKHQNNFEAPSETERRLGTNIPYRFALLN 63

Query: 58  ----EQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDAL 113
               +Q+L  ++++  +++K + R +G S   ++ A   IFTFGSYRLGV+GPG+DID L
Sbjct: 64  INPRKQILHLLQRVTIEFIKSVGRKKGLSQGAIDAAGGKIFTFGSYRLGVYGPGSDIDTL 123

Query: 114 CVGPSYVSREEDFFFILHNILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI 170
            VGP +V+RE DFF    + L ++   + + +L  V DA VP+MK +  G+SIDL++A +
Sbjct: 124 VVGPKHVTRE-DFFADFPSTLEQLAPKDSIEKLTSVPDAFVPIMKLELSGISIDLIFARL 182

Query: 171 SRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKR 230
               V  +LD+ +  +L  +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+ 
Sbjct: 183 VVHSVPLNLDLKNKELLRGLDERELRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQS 242

Query: 231 RGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA 290
           R +YSNV GF GGV WA+LVARVCQLYP A  S+++ +FFR+   W WP PV+L  I++ 
Sbjct: 243 RAIYSNVVGFPGGVAWAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWPQPVLLKPIEDG 302

Query: 291 ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL 350
            L   VW+P+    D+ H MPIITPAYP M +++N+S ST  V++ + + G  I +++ +
Sbjct: 303 PLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISLSTKAVILRELKRGGDIVDKIFM 362

Query: 351 NKAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 409
            + +WS LF  + FF + Y+ YL +   +   +    W G VES+LR L L ++R +  +
Sbjct: 363 GQLRWSDLFAKHSFFSKDYKYYLSITASSTTKEAQSVWSGLVESKLRHLVLALDRKSSIE 422

Query: 410 LQCHPYPHEY 419
           +  HP+P  +
Sbjct: 423 V-AHPFPKGF 431


>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 612

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 165/397 (41%), Positives = 253/397 (63%), Gaps = 7/397 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS   PT+A+++    L + L     +ES+ +  KRE+VL  I+ IA  +++
Sbjct: 5   QAYGVTPPISSQLPTDAELRATDALLEELKRQKTFESQADTAKREEVLASIQNIANAFIR 64

Query: 74  ELTRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           ++ + +   +D ++ +A   +FT+GSYRLGV+GPG+DID L + P YV+R+ D+F    +
Sbjct: 65  QVAQEKEPKNDVLIRNARGRVFTYGSYRLGVYGPGSDIDTLIIAPKYVTRD-DYFKYFPD 123

Query: 133 ILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLN 188
           +L  M   + +T L  V DA VP++KF++ G+SIDL+++ I +  +  D  ++ D  +L 
Sbjct: 124 LLVSMAPKDAITGLAVVTDAFVPIIKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSGLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY+N+ GF GGV WA+
Sbjct: 184 GLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A PS++V++FF V + WRWP PV+L  I+   L   VW+PR  + D  H
Sbjct: 244 LVARVCQLYPKATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MP+ITPAYP M +++N++ S+++V+  +      I E + + K  WS LF  + FF + 
Sbjct: 304 LMPVITPAYPSMCATFNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFFTQG 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           Y+ Y+ V   A + +D   W G+VES++R L   +E+
Sbjct: 364 YKYYISVISSAKSKEDHKIWSGYVESKVRMLVQKLEQ 400


>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
          Length = 601

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/410 (39%), Positives = 257/410 (62%), Gaps = 6/410 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+G+T P+S A PT +++  N  L   L     +E   E EKR+Q L  ++++  +++K
Sbjct: 7   RQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +G S   ++ +   IFT+GSYRLGV+GPG+DID L V P +V RE DFF     +
Sbjct: 67  VVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPTV 125

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A  + + ++ PV DA VP++K +  G+SIDL++A +    V  +LD+ +  +L  +
Sbjct: 126 LEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+LV
Sbjct: 186 DEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           PIITPAYP M +++NVS ST  V++ + + G  + +++ + + +WS LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            YL ++  + + +    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 366 YYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
          Length = 601

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/410 (39%), Positives = 257/410 (62%), Gaps = 6/410 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+G+T P+S A PT +++  N  L   L     +E   E EKR+Q L  ++++  +++K
Sbjct: 7   RQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +G S   ++ +   IFT+GSYRLGV+GPG+DID L V P +V RE DFF     +
Sbjct: 67  VVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPTV 125

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A  + + ++ PV DA VP++K +  G+SIDL++A +    V  +LD+ +  +L  +
Sbjct: 126 LEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+LV
Sbjct: 186 DEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           PIITPAYP M +++NVS ST  V++ + + G  + +++ + + +WS LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            YL ++  + + +    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 366 YYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
 gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
          Length = 601

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/410 (39%), Positives = 257/410 (62%), Gaps = 6/410 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+G+T P+S A PT +++  N  L   L     +E   E EKR+Q L  ++++  +++K
Sbjct: 7   RQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRVTIEFIK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            +++ +G S   ++ +   IFT+GSYRLGV+GPG+DID L V P +V RE DFF     +
Sbjct: 67  VVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFFAHFPAV 125

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A  + + ++ PV DA VP++K +  G+SIDL++A +    V  +LD+ +  +L  +
Sbjct: 126 LEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+LV
Sbjct: 186 DEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ H M
Sbjct: 246 ARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           PIITPAYP M +++NVS ST  V++ + + G  + +++ + + +WS LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            YL ++  + + +    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 366 YYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 414


>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
           1558]
          Length = 648

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 169/401 (42%), Positives = 247/401 (61%), Gaps = 5/401 (1%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS   P  +D+Q +  L K L+    +ES++E + RE++L  I Q+   +V +++
Sbjct: 7   GVTPPISTDPPRPSDIQASEALMKDLIALNQFESEQERKVRERLLSNIAQLVTKFVHDVS 66

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
              G S+++  +A   I+T GSYRLGVHGPG+DID +CV P +V +E  FF     +L  
Sbjct: 67  IKSGLSEKVASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHVFKEH-FFGEFKEMLRA 125

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
              VTE+  V  A VPVMK    G+ +DLL+A ++     + LD+    +L  VD+ + R
Sbjct: 126 WPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLAEAGDKLDLEKDEILRGVDDASQR 185

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
            LNG RV D IL LVP+V  F T LR ++ WAKRRG+YSNV GF GGV WALL AR+CQL
Sbjct: 186 GLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQL 245

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDKTHHMPIIT 314
           YP A P+ +V++FF ++  W WPNPV+L  I+     +  SVW+P+ +RRD  H MPIIT
Sbjct: 246 YPTAAPATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIIT 305

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK-AQWSALFEPYLFFESYRNYLQ 373
           PAYP M +++N++ ST+ V+ ++      + + +  N  + W  LFE   FF  Y++Y+Q
Sbjct: 306 PAYPSMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGSSWMELFEQIDFFSMYKSYVQ 365

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
           V   A+ ++ +  W G VESR+R L   +E ++   +  HP
Sbjct: 366 VIASASTSEGIKDWGGTVESRIRTLVQDLE-NSDNIITAHP 405


>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
          Length = 628

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 173/457 (37%), Positives = 273/457 (59%), Gaps = 41/457 (8%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ PIS+  PT+ D++R  ++ + L    LYE++   +KRE+VLG I ++  ++V E
Sbjct: 94  KYGVSDPISLNYPTDEDLKRANDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVE 153

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           ++  +G +++  +  +  ++TFGSYRLGV  P +DID + + P  ++RE  FF   +  L
Sbjct: 154 ISISQGINEEDAKYIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREI-FFNEFYLKL 212

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE-DLDISDMSVLNDVDEP 193
            + + V +LQ + + + P+++F +D + IDLL A++    +++    + +  +L ++DE 
Sbjct: 213 QQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 272

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNG RVAD IL  VP+ +HF  TLR +K WAK RG+YSN+ GFLGG++WALL A+V
Sbjct: 273 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKV 332

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-----LGFSVWDPRKNRRDKTH 308
           CQLYPN   S L+ +FFRVY++W W  PV++  I++         FSVWDP KN +DK H
Sbjct: 333 CQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLH 392

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-------------- 354
            MPIITPA+PCMNS++NV+  T  +++D+F+  + I   +E+N                 
Sbjct: 393 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVT 452

Query: 355 ----------------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
                           W+ + +P   F +Y+++L + I+A N     +WKGW+ES++R L
Sbjct: 453 PVSTPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLL 512

Query: 399 TLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
              +E  T  +L+  PYP  YV   K    C F   +
Sbjct: 513 FKKLE--TINELRIRPYPKFYV--YKKDNTCVFLKNI 545


>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
 gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
          Length = 506

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 188/500 (37%), Positives = 291/500 (58%), Gaps = 28/500 (5%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           M +SER        +YGVT P+SM   TE D++ + E++ +L E G +E  +E + RE+V
Sbjct: 1   MEASER------SYKYGVTGPLSMKESTEEDIRLSEEMDTYLQERGFFEDCKEGQTRERV 54

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDA-NALIFTFGSYRLGVHGPGADIDALCVGPSY 119
           LG++  + K++V  + + +G  D   E A    IFTFGSYRLGVHG G DIDALC+ P +
Sbjct: 55  LGKLNFMVKEFVARMAKNKGNGDG--EKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRH 112

Query: 120 VSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL 179
           V+R  DFF   +  L E   +  +  + DA VP++KF+F G+ IDL++A ++  VV++ +
Sbjct: 113 VTRS-DFFTYFYEELKEDPNIEGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGI 171

Query: 180 DISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTG 239
           ++ + ++L  +DE  + SLNG RV D++L LVPNV+ F + LRC+K+WAKRR VY N  G
Sbjct: 172 NLLNDTLLKSMDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYG 231

Query: 240 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDP 299
           + GGV ++L VARVCQLYPNA    +V +FF +++ W+WP PV+L  + +      VWDP
Sbjct: 232 YFGGVAFSLCVARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDP 291

Query: 300 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF 359
           +    DK H MP+ITPAYP M +++NVS ST  V+  +F   + I    E N   +  +F
Sbjct: 292 KVYPSDKYHRMPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNPEKN--DFRRIF 349

Query: 360 EPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP--- 416
           E   FF  Y+ +++V  ++ + +    W+G+VES++R L    E      L   P+P   
Sbjct: 350 ELSDFFSRYKLFVEVLAMSTSEEGFAKWEGYVESKIRILASKFEA-VDDILYAIPFPKAF 408

Query: 417 ---HEYVDTSKPCAH-----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW 468
               E +   +P A       AFF+ +   P     +G++  +   V+EF   I  Y   
Sbjct: 409 RVGEESIRKIRPGASEVKKCTAFFIAIDIIP----VKGKKVVVEQQVKEFMEFIKEYEGK 464

Query: 469 KPGMEICVSHIRRKQIPPYV 488
           +  M I V+ +++K I  ++
Sbjct: 465 ESSMRIEVNSLKKKDIQGFL 484


>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
 gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
          Length = 626

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 168/469 (35%), Positives = 278/469 (59%), Gaps = 51/469 (10%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ P+S+  PTE D+++  ++ + L    L+E+++  +KRE+VLG I ++  ++V E
Sbjct: 80  EYGVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIE 139

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           L+  +G +++  ++    ++TFGSYRLGV  P +DID + + P  ++RE  FF   +  L
Sbjct: 140 LSINQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 198

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE-DLDISDMSVLNDVDEP 193
            +   V +LQ + + + P+++F +D + IDLL A++    +++    + +  +L ++DE 
Sbjct: 199 QKDRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEV 258

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNG RVAD IL  VPN ++F  TLR +K WAKRRG+YSN+ GFLGG++WALL A++
Sbjct: 259 TVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKI 318

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHH 309
           CQ+YPN   S L+ +FFRVY++W W  PV++  I +  +     F++WDP KN +DK H 
Sbjct: 319 CQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHI 378

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN------------------ 351
           MPIITPA+PCMNS++NV+  T  +++++F+  ++I   ++LN                  
Sbjct: 379 MPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSY 438

Query: 352 ------------------------KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAW 387
                                    + WS + EP+  F++Y+++L + I+  N      W
Sbjct: 439 GNAININNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLW 498

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 435
           KGW+ES++R L   +E  T  +L+  P+P  Y        +C +FF+ L
Sbjct: 499 KGWIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545


>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
 gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 573

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 168/408 (41%), Positives = 251/408 (61%), Gaps = 7/408 (1%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PKQ G+T P+S A PT+A+ Q    L + L     +ES+ + +KR  VL  ++ I +++V
Sbjct: 6   PKQLGITPPLSTALPTDAEKQATDALIEELTRENNFESRADTDKRTAVLASLQNITEEFV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K + R +   +  + +A   IFT+GS+RLGV+GPG+DID L V P  VSREE +F +  +
Sbjct: 66  KRVCRKQNLPENYINNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YFEMFPD 124

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVLN 188
           +L EM     + +L PV +A+VP++KF++ G+SIDL++A I  L  V   L + D ++L 
Sbjct: 125 LLVEMAPKGAIEDLTPVQEAYVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKDDNLLT 184

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +D+  +RS+NG RV D I+ LVP    F   LR +K WA+RR +Y+N+ GF GGV WA+
Sbjct: 185 GLDDAGLRSVNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGVAWAM 244

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S ++ +FFR+   W+WP PV+L  I   +L   VW+PR  + D  H
Sbjct: 245 LVARVCQLYPQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDSFH 304

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITP+YP M +++NV+ ST  ++  +   G  I + + + KA W  LF+ + FF ++
Sbjct: 305 LMPIITPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTFFTKN 364

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           Y+ YL V   +   +  L W G VES++R L   +E      L  HP+
Sbjct: 365 YKYYLSVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIAL-AHPF 411


>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
          Length = 763

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 199/554 (35%), Positives = 284/554 (51%), Gaps = 79/554 (14%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P K YG+T  IS+A P E D    ++L   +   G++E +EE   R  VLG++    K+W
Sbjct: 14  PQKHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHRLAVLGKLNNFVKEW 73

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           + E++ L+      +      IFTFGSYRLGVH  GADIDALCV P +V R  DFF    
Sbjct: 74  IAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQSFF 132

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L + EE+ +L+ V DA VPV+KFKFDG+ IDLL+A ++   + ++LD+   S+L ++D
Sbjct: 133 EKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILRNLD 192

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              +RSLNGCRV D+IL LVPN E+F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVA
Sbjct: 193 IRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVA 252

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQLYPNAV + LV +FF V++ W WPNPV+L   +++ L   VWDPR +         
Sbjct: 253 RTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS--------- 303

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
            ITP +                                            YL      +Y
Sbjct: 304 -ITPVF--------------------------------------------YLLM--VLHY 316

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
           + +   A+  ++ L W G VES++R L   +ER+ Y  L  H  P  +  + +      F
Sbjct: 317 IVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDF 375

Query: 432 ----FMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
               F+G+  K     E V     +DI+   +      N     K GM+I  +H+++KQ+
Sbjct: 376 VSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 435

Query: 485 PPYVFPEGYKRTRHPRLASQQRSSENGNEYQ-------------TGSGLKRKKDPESVDQ 531
             Y+ PE  ++ +   +A   RSS  G+  +             T SG      P    +
Sbjct: 436 HQYLPPEVVQKKKR-SIAELNRSSNGGSSKRFSLDNSHLDSSRDTDSGTPFNSPPSKTSK 494

Query: 532 DGPEKRQSISPQKQ 545
              +   S+SP KQ
Sbjct: 495 PASDTDDSVSPPKQ 508


>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
          Length = 653

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 187/505 (37%), Positives = 286/505 (56%), Gaps = 32/505 (6%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
             GV++PIS   P + D+    +L   L +   YE KEE EKR +VL  + ++ K+WVK+
Sbjct: 11  HLGVSQPISTLRPDQKDIVMTDQLIATLKKFNSYEPKEETEKRMEVLRSLNRLVKEWVKK 70

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           +T ++  S +   +A   +FTFGSYRLGVH  GADID L V P ++ R  DFF     +L
Sbjct: 71  VTAIKIPSGEGA-NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSFKEML 128

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
            +   VTEL  V +A VPVMK K+ G+ +D+L+A ++   V +  D+ D  +L ++D+ +
Sbjct: 129 RQDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNLDQES 188

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           VRSLNGCRVA+ +LKLVP  + FC  LR +K WAK  G+YSN  GF GG++WA+LVAR C
Sbjct: 189 VRSLNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILVARAC 248

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-----AELGFSVWDPRKNRRDKTHH 309
           QLYPNA  S +V R F +++ W WP+PV+L A+D+       L   +WDPRK   D+ H 
Sbjct: 249 QLYPNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHL 308

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPA+P  NS++NV+ ST  ++ ++   G  IC+++   KA W  LF+   FF  Y+
Sbjct: 309 MPIITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFKEVKFFSRYK 368

Query: 370 NYLQVD----IVAANADDLLAWKGWVESRLRQLTLMIERD-----TYGKLQCH-PYPHEY 419
           +Y+ +     I      +L  W+ ++ESR+R L   +ER+      +     H P P+  
Sbjct: 369 HYIGISDHGYIHRRRGIEL--WR-FLESRIRLLVQSLERNQDILIAHNDTNKHRPSPNAK 425

Query: 420 VDTSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM------ 472
            D          +F+GL     E  +     D+   ++ F+ ++ +      G+      
Sbjct: 426 FDVRPENTRITIWFIGL-----EFAEHATNLDLTSEIQRFRTNVELQASGVKGIGPNSQV 480

Query: 473 EICVSHIRRKQIPPYVFPEGYKRTR 497
           EI + +++R ++   +     K+ R
Sbjct: 481 EIDMFYMKRTRLFSIIGAAALKKGR 505


>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
          Length = 631

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 169/398 (42%), Positives = 250/398 (62%), Gaps = 11/398 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR----EQVLGRIRQIAKDWV 72
           GVT PIS+A PTEA+    + L   L     +ES  + EKR    E VL  + +I  ++V
Sbjct: 9   GVTPPISLALPTEAENHAMQTLIDELRRQNTFESPTDTEKRQALSETVLEHLARICDEFV 68

Query: 73  KELTRLRGY-SDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           K + R R   +D ++ DA   IFT+GSYRLGV+GPG+DID L V P YV+R  D+F I  
Sbjct: 69  KRVARKREEGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIFP 127

Query: 132 NILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVL 187
           ++L EM     +T++  V DA VP++KF+F G+SIDL+++ I+ L  + +D ++ D  +L
Sbjct: 128 DLLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLL 187

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR +Y+N+ GF GGV WA
Sbjct: 188 RGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWA 247

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V++FF +   W WP PV+L  ++   L   VW+P+  + D+ 
Sbjct: 248 MLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQF 307

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MP+ITPAYP M ++YN++ S + V+  + Q G  I + + L ++ WS LF  + FF +
Sbjct: 308 HLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRSPWSDLFVKHTFFTQ 367

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
            Y+ Y+ V   + + +    W G+VES++R L   +E+
Sbjct: 368 GYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQ 405


>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
 gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
 gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
          Length = 505

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 285/487 (58%), Gaps = 24/487 (4%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGVT P+S    TE +++ + E++K+L E G +E  +E + RE+VLG++  + +++V  
Sbjct: 9   KYGVTGPLSTRESTEEEIRLSGEMDKYLQERGFFEDDKEGQTRERVLGKLNFMVREFVAR 68

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           + R +G  D         IFTFGSYRLGVH  GADIDALC+ P +VSR  DFF   +  L
Sbjct: 69  MARNKGSGDGE-RPCGGKIFTFGSYRLGVHSKGADIDALCIVPRHVSRS-DFFTHFYEEL 126

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
                + E+  + DA VP++K KF G+ IDL++A +S  VV++ +++ + ++L  +DE  
Sbjct: 127 KGDPNIEEVTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKSMDEKC 186

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           + SLNG RV D++L LVP+V+ F + LRC+K+WAKRR VY N  G+ GGV ++L VARVC
Sbjct: 187 ILSLNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVC 246

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QLYPNA    +V +FF +++ W+WP PV+L  + +      VWDP+    DK H MP+IT
Sbjct: 247 QLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVIT 306

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP M +++NVS ST  V+  +F   + I  + E N   +  +FE   FF  YR +++V
Sbjct: 307 PAYPSMCATHNVSNSTQHVITMEFTRAHKILSDPERN--DFRRIFELSDFFSRYRLFVEV 364

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-------------VD 421
             +++  +D   W+G++ES++R L    E      L   P+P  +             ++
Sbjct: 365 LAMSSCEEDFPKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEESIEKIGPRME 423

Query: 422 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRR 481
             K C   AFF+ +   P     +G++  +   V+EF   +  Y     GM I V+ ++R
Sbjct: 424 GMKKCT--AFFIAIDVIP----VKGKKVIVEQQVKEFIEFVREYEGRASGMRIEVNSLKR 477

Query: 482 KQIPPYV 488
           K +  ++
Sbjct: 478 KDVQGFL 484


>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
 gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
          Length = 575

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 169/392 (43%), Positives = 254/392 (64%), Gaps = 9/392 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT PIS A PT+A+   N+ + + L +   +ES  E +KR QVL +++ I  ++VK++ 
Sbjct: 9   GVTPPISTALPTDAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEFVKQVA 68

Query: 77  RLRGY-SDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           R R   S+ +++DA   IFT+GS+RLGV+GPG+DID L V P YV+R+ D+F I   +L 
Sbjct: 69  RKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRD-DYFEIFPGLLQ 127

Query: 136 EM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLY---ASISRLVVREDLDISDMSVLND 189
           +M   + +T+L  V DA VP++KF+F G+SIDL++   AS+ +L       ++D ++L  
Sbjct: 128 KMTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRG 187

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +DE  +RSLNG RV D+I+ LVP    F   LR +K WA+RR +Y+N+ GF GGV WA+L
Sbjct: 188 LDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAML 247

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VARVCQLYP A  S++V++FF +   W WP PV+L A++E  L   VW+P+  R D+ H 
Sbjct: 248 VARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHL 307

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-Y 368
           MPIITPAYP M +++N++ S + V+  + Q G  I + V L+K  W  LF  + FF S Y
Sbjct: 308 MPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGY 367

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTL 400
           + Y+ V   +   +    W G+VES++++ +L
Sbjct: 368 KYYISVVTTSTTKEAHKIWSGYVESKVQEGSL 399


>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
           206040]
          Length = 572

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 197/579 (34%), Positives = 302/579 (52%), Gaps = 71/579 (12%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS+  PTEA+ + +  L+  L     +ES  E +KR +VL  ++ I  ++V+++
Sbjct: 7   YGVTPPISVNLPTEAEKRASDALKDELRRQKTFESPSETDKRWKVLDSLQLICNEFVRKV 66

Query: 76  -TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
            T     ++ ++++A   +FT+GS+RLGV GPG+DID L V P YV+RE D+F    ++L
Sbjct: 67  ATEKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKYFPDLL 125

Query: 135 AEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDV 190
             M     +T+L  V DA VP++KF++  +SIDL+++ I +  +  D  D+ D S+L  +
Sbjct: 126 VAMAPAGAITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFADLKDSSLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LV
Sbjct: 186 DEAELRSLNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V++FF V   WRWP PV+L  I    L   VW+P+  + D  H M
Sbjct: 246 ARVCQLYPKAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           P+ITPAYP M +++N++ S++ ++  + + G  I EE+ + K  WS LF  + FF + YR
Sbjct: 306 PVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTFFTQGYR 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---------- 419
            Y+ V   + N +    W G+VES++R L   +E+ +   L  HP+   Y          
Sbjct: 366 YYISVVSASKNKEAHKVWSGYVESKVRMLVQKLEQHSSIAL-AHPFNKGYDRRHLCKNDH 424

Query: 420 ---------------------------------VDTSKPCAHCAFFMGLQRKPGEVVQEG 446
                                             D+S P +    +        E+ +  
Sbjct: 425 EIEQVQEGSLEFVIKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIGIELEEGA 484

Query: 447 QQFDIRGSVEEFKLSINMYMFW----KPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 502
           +  D+   V+EFK+    +  +    +P + + V H+R   +P  VF  G          
Sbjct: 485 KSLDLSYQVDEFKVLCTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFEAG---------- 534

Query: 503 SQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSIS 541
                 E   + ++   L  KK   + D   P KRQ  S
Sbjct: 535 ------ETKPQKKSAKSLASKKRGPTEDNTPPAKRQQAS 567


>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
          Length = 505

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 183/486 (37%), Positives = 285/486 (58%), Gaps = 22/486 (4%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           ++GVT P+SM   TE D++ + E++ +L E G +E  EE + RE+VLG++  + K++V  
Sbjct: 9   KHGVTGPLSMKESTEEDVKLSEEMDMYLQERGFFEDDEEGQTRERVLGKLNFMVKEFVAR 68

Query: 75  LTRLRGYSDQMVEDA-NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + + +G  D   E A    IFTFGSYRLGVHG G DIDALC+ P +V+R  DFF   +  
Sbjct: 69  MAKNKGNGDG--EKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTYFYEE 125

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L     +  +  + DA VP++KF+F G+ IDL++A ++  VV++ +++ + ++L  +DE 
Sbjct: 126 LKGDPNIKGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEK 185

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            + SLNG RV D++L LVPNV+ F + LRC+K+WAKRR VY N  G+ GGV ++L VARV
Sbjct: 186 CILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARV 245

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA    +V +FF +++ W+WP PV+L  + +      VWDP+    DK H MP+I
Sbjct: 246 CQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVI 305

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++NVS ST  V+  +F   + I   +E N   +  +FE   FF  Y+ +++
Sbjct: 306 TPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNLEKN--DFRRIFELSDFFGRYKLFVE 363

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP------HEYVDTSKPCA 427
           V  ++   +    W+G+VESR+R L    E      L   P+P       E +   KP A
Sbjct: 364 VLAMSTLEEGFTKWEGYVESRIRILASKFEA-VDDILYAIPFPKAFRVLEESIGKIKPGA 422

Query: 428 H-----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 482
                  AFF+ +   P     +G++  +   V+EF   +  Y   +  M I ++ ++RK
Sbjct: 423 EEVKRCTAFFIAIDVIP----VKGKKVVVEQQVKEFMEFVKEYEGKESNMWIEINSLKRK 478

Query: 483 QIPPYV 488
            +  ++
Sbjct: 479 DVQGFL 484


>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
          Length = 593

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 195/568 (34%), Positives = 301/568 (52%), Gaps = 78/568 (13%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEK----REQVLGRIRQIAKDW 71
           YGVT PIS++ PTE + + +  L + L     +ES  + +K    R  VL  +++I  ++
Sbjct: 7   YGVTPPISVSLPTENEKRISESLIEELRRQKTFESPSDTQKSLSNRHTVLESLQKITDEF 66

Query: 72  VKELTRLRG-YSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           V+++ R +   +D ++++A   +FT+GS+RLGV GPG+DID L V P YV+RE D+F   
Sbjct: 67  VRKVAREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKYF 125

Query: 131 HNILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSV 186
             +LAEM   + +T+L  V DA VP++KF++ G+SIDL+++ I +  +  D  D+ D  +
Sbjct: 126 PELLAEMAPKDSITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGL 185

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY N+ GF GGV W
Sbjct: 186 LRGLDEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAW 245

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVARVCQLYP A  S++V++FF V + WRWP PV+L  I+   L   VW+P+  + D 
Sbjct: 246 AMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDS 305

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MPIITPAYP M +++N++ S++ ++  + Q G  I E+V + K  W+ LF  + FF 
Sbjct: 306 FHLMPIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFFT 365

Query: 367 S-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV----- 420
           + Y+ Y+ V   +   D    W G++ES++R L   +E   +  L  HP+   Y      
Sbjct: 366 TGYKYYISVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKGYSRRHLC 424

Query: 421 ---------------------------------------------DTSKPCAHCAFFMGL 435
                                                         TS        ++GL
Sbjct: 425 KDETQIEQVQEGSLDFVVSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEVFTTTHYIGL 484

Query: 436 QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFW----KPGMEICVSHIRRKQIPPYVFPE 491
           + + G      +  D+   V+EFK+    +  +    KP + I V H+R   +P  VF  
Sbjct: 485 ELEEG-----AKSLDLSYQVDEFKVLCTAWQKYQDELKPLVSIGVQHVRNFNLPDDVFGA 539

Query: 492 GYKRTRHPRLASQQRSSENGNEYQTGSG 519
             K+        Q++SS+  N  + G+ 
Sbjct: 540 DEKK-------PQKKSSKGANGKKRGAA 560


>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
 gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
          Length = 631

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 170/450 (37%), Positives = 273/450 (60%), Gaps = 34/450 (7%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GVT+PIS+  P+E D++R+ ++ + L    L+E +   +KRE VLG I ++  +++ EL+
Sbjct: 83  GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +G S++   + +  ++TFGSYRLGV  P +DID + + P  ++RE  FF   +  L +
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTRE-IFFNEFYLKLQQ 201

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE-DLDISDMSVLNDVDEPTV 195
              V +LQ + + + P+++F +D + IDLL A++    +++    + +  +L ++DE TV
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNG RVAD IL  VPN ++F  TLR +K WAK RG+YSN+ GFLGG++WALL A++CQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMP 311
           LYPN   S L+ +FF+VY++W W  PV+L  I +  +     F VWDP KN +DK H MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE----------LNK--------- 352
           IITPA+PCMNS++NV+  T  +++++F+  ++I + +E          +NK         
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMNKLWPNNNVNN 441

Query: 353 ------AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDT 406
                   W  + EP   F +Y+++L + I+  N     +WKGW+ES++R L   +E  T
Sbjct: 442 INNSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--T 499

Query: 407 YGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 435
             +L+  P+P  Y    +   +C +FF+ L
Sbjct: 500 INELKIRPFPKFYFYKKEKSYYCSSFFIAL 529


>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
          Length = 624

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 167/410 (40%), Positives = 254/410 (61%), Gaps = 8/410 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT PIS+  PTEA+++++  L + L     +ES  E  KRE+VL  I+ I   +V+ +
Sbjct: 7   FGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVRRV 66

Query: 76  TRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
              +   ++ +V +A   +FT+GSYRLGV+GPG+DID L V P YV+RE D+F    ++L
Sbjct: 67  AEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKYFPDLL 125

Query: 135 AEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDV 190
             M   + +T++  V DA VP++KF++ G+SIDL+++ I +  +  D  D+ D  +L  +
Sbjct: 126 VSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY+N+ GF GGV WA+LV
Sbjct: 186 DEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A P+++V++FF V + WRWP PV+L  I+   L   VW+P+  + D  H M
Sbjct: 246 ARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           P+ITPAYP M +++N++ S++ ++  + +    I E + +    WS LF  + FF + Y+
Sbjct: 306 PVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            Y+ V   A   +    W G+VES++R L   +E+     L  HP+   Y
Sbjct: 366 YYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414


>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
 gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
          Length = 613

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 167/469 (35%), Positives = 277/469 (59%), Gaps = 51/469 (10%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ P+S+  PTE D+++  ++ + L    L+E+++  +KRE+VLG I ++  ++V E
Sbjct: 80  EYGVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIE 139

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           L+  +G +++  ++    ++TFGSYRLGV  P +DID + + P  ++RE  FF   +  L
Sbjct: 140 LSINQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREI-FFNEFYLKL 198

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRED-LDISDMSVLNDVDEP 193
            +   V +LQ + + + P+++F +D + IDLL A++    +++    + +  +L ++DE 
Sbjct: 199 QQDRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCCYTLDNDYILKNLDEV 258

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           TVRSLNG RVAD IL  VPN ++F  TLR +K WAKRRG+YSN+ GFLGG++WALL A++
Sbjct: 259 TVRSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKI 318

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHH 309
           CQ+YPN   S L+ +FFRVY++W W  PV++  I +  +     F++WDP KN +DK H 
Sbjct: 319 CQIYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHI 378

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN------------------ 351
           MPIITPA+PCMNS++NV+  T  +++++F+  ++I   ++ N                  
Sbjct: 379 MPIITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSH 438

Query: 352 ------------------------KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAW 387
                                    + WS + EP+  F++Y+++L + I+  N      W
Sbjct: 439 GNAININNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLW 498

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC-AFFMGL 435
           KGW+ES++R L   +E  T  +L+  P+P  Y        +C +FF+ L
Sbjct: 499 KGWIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545


>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
          Length = 632

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 183/490 (37%), Positives = 284/490 (57%), Gaps = 22/490 (4%)

Query: 1   MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEED----EK 56
           M+S ER         YGVT PIS A PTE + Q    L + L +   +E+++ +    E 
Sbjct: 1   MASEERA--------YGVTPPISTALPTELENQAKEALIEELKKQNTFETRQSNPFLGES 52

Query: 57  REQVLGRIRQIAKDWVKELTRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCV 115
           R QV+  ++QI  ++VK + R R   ++ ++ DA   IFT+GS+RLGV+GPG+DID L V
Sbjct: 53  RYQVINHLQQICDEFVKRVARKREEGNEALIRDARGQIFTYGSFRLGVYGPGSDIDTLVV 112

Query: 116 GPSYVSREEDFFFILHNILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISR 172
            P YV+R  D+F I   +L EM   + +T++  V DA VP++KF+F G+SIDL+++ I+ 
Sbjct: 113 APKYVTRS-DYFEIFPGLLKEMAPSDAITDMAVVEDAFVPIIKFEFFGISIDLIFSRIAM 171

Query: 173 LV-VREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRR 231
           L  + ++ ++ D  +L  +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR
Sbjct: 172 LKQLPKEFNVQDSGLLRGLDEAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRR 231

Query: 232 GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE 291
            +Y+N+ GF GGV WA+LVARVCQLYP A  S++V++FF +   W WP PV+L  ++   
Sbjct: 232 AIYANIMGFPGGVAWAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGP 291

Query: 292 LGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN 351
           L   VW+P+  + D+ H MP+ITPAYP M ++YN++ S + V+  +   G  I + + + 
Sbjct: 292 LQVRVWNPKVYKGDQFHLMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVG 351

Query: 352 KAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 410
           K  WS LF  + FF + Y+ Y+ V   + + +    W G+VES++R L   +E+     L
Sbjct: 352 KNPWSDLFVKHTFFTQGYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQHQSIAL 411

Query: 411 QCHPYPHEYVDTSKPCAHCAFFMGLQRKP-GEVVQEGQQFDIRGSVEEFKLSINMYMFWK 469
             H +   Y +    C        +Q      +V++ Q  D  G+++E KL     +   
Sbjct: 412 -AHAFNKGY-ERRHRCTSDEEVQQIQAGSLNFLVKDSQATDDAGALKEEKLETKAELNGI 469

Query: 470 PGMEICVSHI 479
           PG++    +I
Sbjct: 470 PGLKTETDNI 479


>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
          Length = 635

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 162/397 (40%), Positives = 251/397 (63%), Gaps = 7/397 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS+  PTEA+++++  L + L     +ES  E  KRE+VL  I+ I   +V+
Sbjct: 5   QAYGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQTICDAFVR 64

Query: 74  ELTRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            + + +   ++ ++ +A   +FT+GSYRLGV+GPG+DID L V P YV+RE D+F    +
Sbjct: 65  RVAQEKEPKNEVLIRNARGKVFTYGSYRLGVYGPGSDIDTLIVAPKYVTRE-DYFKFFPD 123

Query: 133 ILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLN 188
           +L  M   + +T++  V DA VP++KF++ G+SIDL+++ + +  +  D  D+ D  +L 
Sbjct: 124 LLLSMAPKDAITDMAVVTDAFVPIIKFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY+N+ GF GGV WA+
Sbjct: 184 GLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A  S++V++FF V + WRWP PV+L  I+   L   +W+P+  + D  H
Sbjct: 244 LVARVCQLYPKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES- 367
            MP+ITPAYP M +++N++ S++ ++  + +    I E + + K  WS LF  + FF + 
Sbjct: 304 LMPVITPAYPSMCATFNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFFTAG 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           Y+ Y+ V   A   +    W G+VES++R L   +E+
Sbjct: 364 YKYYISVTSAAKTKEAHTIWSGYVESKVRMLVQKLEQ 400


>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
          Length = 596

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 168/398 (42%), Positives = 250/398 (62%), Gaps = 8/398 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQYGVT P+S   PTE   ++   L + L + G +ES  E +KR +VL  +R +A  +VK
Sbjct: 5   KQYGVTPPLSTEMPTEEQRRQTDALLEELRQQGTFESTAETQKRFKVLESLRMVADAFVK 64

Query: 74  ELTRLRGYSD-QMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            + + +   +  +  DA A IFT+GS+RLGV+ PG+DID L V P YVSRE D+F     
Sbjct: 65  RVAKEKAPDNPTLFRDACAKIFTYGSFRLGVYMPGSDIDTLVVAPKYVSRE-DYFNYFPE 123

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASI--SRLVVREDLDISDMSVL 187
           +L  M     +T+L PV DA VP++KF+++G+SIDL+++ +  ++L   +   + D ++L
Sbjct: 124 MLQAMTPPGSITDLTPVEDAFVPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLL 183

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  +RS+NG RV D+IL LVP    F   LR +K WA+RR +Y+N+ GF GGV WA
Sbjct: 184 RGLDEAELRSVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWA 243

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           ++VARVCQLYP A  +++VS+FF +   W WPNPV+L  I++  L   VW+P+  R D+ 
Sbjct: 244 MMVARVCQLYPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQF 303

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP M ++YN+S S+L ++  + +  + I + +   + QW  LF  + FF S
Sbjct: 304 HIMPIITPAYPSMCATYNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTFFTS 363

Query: 368 -YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
            Y+ Y+ V   +   D    W G+VES++R L   +ER
Sbjct: 364 DYKYYISVISASTEKDAQNTWSGFVESKVRVLVQGLER 401


>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
          Length = 619

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 168/398 (42%), Positives = 249/398 (62%), Gaps = 11/398 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR----EQVLGRIRQIAKDWV 72
           GVT PIS A PTEA+    + L   L     +ES  + +KR    E+VL  + +I  ++V
Sbjct: 9   GVTPPISSALPTEAENHAMQTLIDELRRQNTFESPADTQKRQMPSEKVLEHLARICDEFV 68

Query: 73  KELTRLRGY-SDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           K + R R   +D ++ DA   IFT+GSYRLGV+GPG+DID L V P YV+R  D+F I  
Sbjct: 69  KRVAREREKGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIFP 127

Query: 132 NILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSVL 187
           ++L EM     +T++  V DA VP++KF+F G+SIDL+++ I+ L  + +D ++ D  +L
Sbjct: 128 DLLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLL 187

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR +Y+N+ GF GGV WA
Sbjct: 188 RGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWA 247

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V++FF +   W WP PV+L  ++   L   VW+P+  + D+ 
Sbjct: 248 MLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQF 307

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MP+ITPAYP M ++YN++ S + V+  + Q G  I + + L +  WS LF  + FF +
Sbjct: 308 HLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFFTQ 367

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
            Y+ Y+ V   + + +    W G+VES++R L   +E+
Sbjct: 368 GYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQ 405


>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
          Length = 608

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 169/410 (41%), Positives = 255/410 (62%), Gaps = 8/410 (1%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS++ PTE + + +  L + L     +ES  + + R  VL  ++ I  ++VK++
Sbjct: 7   YGVTPPISVSLPTEIEKRVSESLIEELRRQKTFESPSDTQNRFTVLESLQIITDEFVKKV 66

Query: 76  TRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
            R +   +D ++++A   +FT+GS+RLGV GPG+DID L V P YV+RE D+F    ++L
Sbjct: 67  AREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKYFPDLL 125

Query: 135 AEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDV 190
            EM   + +T++  V DA VP++KF++ G+SIDL+++ I +  +  D  D+ D   L  +
Sbjct: 126 TEMAPKDSITDITAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSGFLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY N+ GF GGV WA+LV
Sbjct: 186 DEAELRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V++FF V + WRWP PV+L  I+   L   VW+P+  + D  H M
Sbjct: 246 ARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           PIITPAYP M +++N++ S++ ++  + Q G  I E+V + K  WS LF  + FF + Y+
Sbjct: 306 PIITPAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFTTGYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            Y+ V   +   +    W G++ES++R L   +E+  +  L  HPY   Y
Sbjct: 366 YYISVVSASKAKEPHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGY 414


>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
          Length = 575

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 196/568 (34%), Positives = 310/568 (54%), Gaps = 67/568 (11%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGL---------------YESKEE 53
           S    +Q  +    +   P   + +R   LEK   E  L               YES+ +
Sbjct: 11  STTAQQQKQIGSAATATEPITTNFERRYYLEKSTYEDTLESKQIVEILKNDFNQYESEGD 70

Query: 54  DEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDAL 113
            +KR+ +LG++ QI  +W++ + +  G  D  V+++   IFTFGSYRLGVH P  DIDAL
Sbjct: 71  RKKRDAILGKLNQIIVEWIQNVGKREGKDDDTVKNSGGKIFTFGSYRLGVHSPDTDIDAL 130

Query: 114 CVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASIS-R 172
           CV P ++ R   FF  L +IL     V +L  V +A+VPV+   F+G+ IDLL+A +  +
Sbjct: 131 CVAPRHIERTRHFFGELSDILKNHPGVQKLTEVQEAYVPVINMVFEGVEIDLLFARVELK 190

Query: 173 LVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRG 232
            V +E +++ D ++L + D+ ++RSLNGCRV D IL+LVPN E F TTLR +K WAK RG
Sbjct: 191 EVGQELVNLLDDNILRNCDKESIRSLNGCRVTDSILQLVPNQESFRTTLRVIKLWAKVRG 250

Query: 233 VYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRW--PNPVMLCAI--D 288
           +YSNV GFLGGV WA+LVA +C   PN  P+ L++ FF+ YT W W   NP++L  I  D
Sbjct: 251 IYSNVMGFLGGVAWAILVANICITCPNLEPNKLLNYFFKAYTQWEWNYQNPILLTEIKND 310

Query: 289 EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV 348
              + F++         +T  MPIITPA+P MN+++NVS ST R M+ +F+ G  I E +
Sbjct: 311 RNSVNFTIEADLFYEEKQTDLMPIITPAFPSMNATFNVSHSTKRAMLIEFEKGLKITEAL 370

Query: 349 ------------ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 396
                       E+N   W  LF+ + FF+SY +++Q+ I++ +A+D   W G++ES++R
Sbjct: 371 LARNEDGSKLHQEMN---WRRLFKKFNFFKSYVHFIQIQILSKSAEDHKKWTGFIESKIR 427

Query: 397 QLTLMIERDTYGKLQC---HPYPHEY---VDTSKPCAHCAFFMGLQRKPGEVVQEGQQFD 450
           +L   +E+    K  C    P+P  Y    +   P     +F G++ K  E   +  + D
Sbjct: 428 KLLQQLEKLNELKGGCMEFRPWPKSYHLENNLDFPMDDTYYF-GIRIKKNESDAQ-MRID 485

Query: 451 IRGSVEEFK------LSIN---MYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRL 501
           +  +++ F       +S++   M M     ++I +++IRR+ +P  + P G         
Sbjct: 486 LTDTIKIFYKKLREWISVDHKLMQMIVDKLVDIKINYIRRETLPDVIRPRG--------- 536

Query: 502 ASQQRSSENGNEYQTGSGLKRKKDPESV 529
                 ++N NE  +  G +++ D + +
Sbjct: 537 ------AQNLNEQDSALGKRQRVDSQRI 558


>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
          Length = 611

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 168/401 (41%), Positives = 255/401 (63%), Gaps = 11/401 (2%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PKQ+GV+ PIS A P   D ++  EL + L     YE  +E +KR   L  + ++ +++V
Sbjct: 9   PKQWGVSPPISTALPEPLDNEKTAELIEELKRENNYEPMDETKKRMSTLALLNRVTQEFV 68

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           +E++R +      ++     I+ +GSYRLGV GPG+DID L V P +V+RE DFF     
Sbjct: 69  REVSRRQRLPPSQIDQFGGKIYPYGSYRLGVFGPGSDIDTLAVAPRHVTRE-DFFEYFPA 127

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRL-VVREDLDISDMSVLN 188
           +L  M     VT L  V D+ VP++K   +G+ IDL++ASI+ L  + +DL ++D ++L 
Sbjct: 128 VLERMAGPGAVTSLTAVPDSFVPIIKLVLNGIEIDLIFASIASLQTIPKDLTLNDNNLLM 187

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +D+PTVR++ G RV D+IL LVP  + F T LR +K WA+RR +Y+N+ G+ GGV WA+
Sbjct: 188 GLDQPTVRAVTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGVAWAM 247

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE---AEL--GFSVWDPRKNR 303
           LVARVCQLYP+AV + +V +FF V + W WP PVML  I++   A+L  GF VW+P    
Sbjct: 248 LVARVCQLYPHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYP 307

Query: 304 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 363
            D+ + MPIITPA+P M ++YN+S S  +V++++ + G  I  ++   KA+WS LF+ + 
Sbjct: 308 GDRKNIMPIITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLFKKHT 367

Query: 364 FFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           FF + ++ YL +   + NAD   AW G VES++R   + +E
Sbjct: 368 FFTADHKYYLSITASSLNADSAKAWAGLVESKVRIFVMQLE 408


>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
 gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
          Length = 496

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 171/410 (41%), Positives = 245/410 (59%), Gaps = 8/410 (1%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  G T  +S   PTE D +  +ELE  L +  ++E++EE  +R + L R+++I+  W
Sbjct: 12  PARCLGETGALSFKKPTEQDFRDTQELEASLAQLNIFETQEEISQRREALVRLQEISNAW 71

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           +++    +     +       IFTFGSYRLGV+  GADID+L V P +++REE FF    
Sbjct: 72  IRQKALEQNLPAHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQ 130

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS--VLND 189
            +LAE   V +L  V+DA VPV+K KF G+ IDLL+A I ++ + E+  + + +  ++ +
Sbjct: 131 TVLAENSNVEDLHAVVDAFVPVLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRN 190

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +DE  VRS+NG RV + IL LV N   F   L+ ++ WAKRR VYSN  GFLGGV+WA+L
Sbjct: 191 MDERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAIL 250

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTH 308
           V+R+CQLYP A PSM+V  FF +++ W WP PV L   +  A L   VWDPR N  D+ H
Sbjct: 251 VSRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYH 310

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPI+TP+YP  NS+YNV  S   ++  + + G  +     ++K  WS LFE   FF+ Y
Sbjct: 311 LMPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEAAFFFQ-Y 369

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL---QCHPY 415
           R+Y+ V +V       +   G VESRLR L    E + Y K+    CH Y
Sbjct: 370 RHYVVVIVVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAY 419


>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
          Length = 661

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 172/398 (43%), Positives = 252/398 (63%), Gaps = 13/398 (3%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS A PTEA+ + ++ L + L   G +ES+ E E R++V+ ++ +I   +VK+ 
Sbjct: 6   YGVTPPISTALPTEAEKRMHQALHEELRAQGTFESRAETEARKKVIAQLEKITTAFVKKA 65

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           T     +  MV +A   +FT+GSYRLGV+GPG+DID L V P +V+ E+ +F +   +L 
Sbjct: 66  T-AETQNSFMVREAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKHVTTEQ-YFRLFPPLLV 123

Query: 136 EME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VRED--LDISDMSVLND 189
           EM     +T+L PV DA VP++KF+F G+SIDL++ SI  L  + ED   +++D ++L  
Sbjct: 124 EMAPPGAITDLTPVPDAFVPIIKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTLLRG 183

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           + E  VRSLNG RV D+IL LVP    F   LR +K WA+R+ +Y+N+ GF GGV WA+L
Sbjct: 184 LSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAML 243

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS---VWDPRKNRRDK 306
           VARVCQLYP A  +++V++FF +   W WP PV+L  I E  +  +   VW+P+    D+
Sbjct: 244 VARVCQLYPKATSAVVVNKFFHIMLKWPWPLPVLLKDI-EYNISVTRAPVWNPKLYSSDR 302

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MPIITPAYP M +++N++ S+  V+M + + G  + EE+   +A W ALF  + FF 
Sbjct: 303 NHRMPIITPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTKHTFFT 362

Query: 367 S-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           S +R YL V   +   D    W G++ESR+R L   IE
Sbjct: 363 SDFRYYLTVISSSRTKDAQNVWSGFIESRVRVLVNKIE 400


>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
          Length = 711

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 167/412 (40%), Positives = 255/412 (61%), Gaps = 8/412 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + +GVT PIS+  PTEA+++++  L + L     +ES  E  KRE+VL  I+ I   +V+
Sbjct: 5   QAFGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDAFVR 64

Query: 74  ELTRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            +   +   ++ +V +A   +FT+GSYRLGV+GPG+DID L V P YV+RE D+F    +
Sbjct: 65  RVAEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKYFPD 123

Query: 133 ILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLN 188
           +L  M   + +T++  V DA VP++KF++ G+SIDL+++ I +  +  D  D+ D  +L 
Sbjct: 124 LLVSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLR 183

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY+N+ GF GGV WA+
Sbjct: 184 GLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAM 243

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVARVCQLYP A P+++V++FF V + WRWP PV+L  I+   L   VW+P+  + D  H
Sbjct: 244 LVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFH 303

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES- 367
            MP+ITPAYP M +++N++ S++ ++  + +    I E + +    WS LF  + FF + 
Sbjct: 304 LMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAG 363

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           Y+ Y+ V   A   +    W G+VES++R L   +E+     L  HP+   Y
Sbjct: 364 YKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414


>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
 gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
          Length = 553

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 280/482 (58%), Gaps = 17/482 (3%)

Query: 21  PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRG 80
           PIS AGPT AD+++N  + +FL  A    SKE+ EKRE+ L  +  +  DW+ E+   +G
Sbjct: 21  PISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQG 80

Query: 81  YSDQMV--EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME 138
            + +    +  N  +FTFGS+RLG+  P +DID LCV P +V+RE  FF  L   L +M+
Sbjct: 81  MTAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQQMD 139

Query: 139 EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSL 198
           EV  + PV DA+ P++K     + IDLL+A ++        D+    +L ++D+ +VR +
Sbjct: 140 EVETVTPVPDAYAPIIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCV 199

Query: 199 NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           NG RVAD ILKLVP    F   LR +K WAKRRG+Y+N+ GF GG+ WA+LVARVCQ++P
Sbjct: 200 NGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFP 259

Query: 259 NAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG---FSVWDPRKNRRDKTHHMPIIT 314
           N     LV RFF + + W W NPV LC I + +E+G   F VW+P++   D++H MP+IT
Sbjct: 260 NMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVIT 319

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PA+P MNS+YNV+ +T R++M + +  + +    +  +  W  L   + FF +Y  Y+Q+
Sbjct: 320 PAFPSMNSTYNVTETTKRIIMGEIERAHKLTLPKK-EQVDWELLCHKFPFFCNYLYYVQI 378

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---VDTSKPCAHCAF 431
            + A ++     +KG+VESRLR L  M+E +T G     P+P E    VD       C +
Sbjct: 379 RVSALSSTAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPYVVDGEVRENSCCW 437

Query: 432 FMGLQRKPGEVVQEGQQF--DIRGSVEEFKLSINMYM---FWKPGMEICVSHIRRKQIPP 486
           ++GL       +  GQ    D+R     F   IN +     +    E+ +++I R ++P 
Sbjct: 438 YIGLDFPKLSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFEMDIAYISRPKLPE 497

Query: 487 YV 488
           ++
Sbjct: 498 HL 499


>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
          Length = 704

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 197/568 (34%), Positives = 298/568 (52%), Gaps = 29/568 (5%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  G T  +S   PTE D++  +ELE  L +  ++E++EE  +R + L R+++I+  W
Sbjct: 8   PARCLGETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGW 67

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           +++    +     +       IFTFGSYRLGV+  GADID+L V P +++REE FF    
Sbjct: 68  IRQKALEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQ 126

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS--VLND 189
            +LAE   V +L  V+DA VPV+K KF G+ IDLL+A I ++ + E+  + + +  ++ +
Sbjct: 127 TVLAENPNVEDLHAVVDAFVPVVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRN 186

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +DE  VRS+NG RV + IL LV N   F   L+ ++ WAKRR VYSN  GFLGGV+WA+L
Sbjct: 187 MDERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAIL 246

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRKNRRDKTH 308
           V+R+CQLYP A PSM+V  FF +++ W WP PV L   +  A L   VWDPR N  D+ H
Sbjct: 247 VSRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYH 306

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPI+TP+YP  NS+YNV  S   ++  + + G  +     ++K  WS LFE   FF+ Y
Sbjct: 307 LMPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEAAFFFQ-Y 365

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL---QCHPYPHEYVDTSKP 425
           R+Y+ V +V       +   G VESRLR L    E + Y K+    C  Y     D    
Sbjct: 366 RHYVVVIVVGNVKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAYGKGPNDDDAN 425

Query: 426 CAHCAFFMGLQ--RKPGEVVQEGQQFDIRGSVEEFK--LSINMYMFWKP--------GME 473
                +F+G++  R    +       +  G        LS N+  F K          + 
Sbjct: 426 FVR-KWFIGMEFDRNTNSLTSTVHNSNTAGEKPTLNVDLSENISSFEKSIERGLSSEDLS 484

Query: 474 ICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTG-------SGLKRKKDP 526
           + V ++++ Q+  ++  E     +    A+   +  N  E   G       + L     P
Sbjct: 485 VTVKYVKKSQLAQFISAEDMDEIKRQAAAAALSNVNNSTENLKGVRQLPSNNALSTMSSP 544

Query: 527 -ESVDQDGPEKRQSISPQKQDSLSPDHL 553
             S++    E+  S S + Q+S+S   L
Sbjct: 545 ASSIELSTSEEASSPSNRLQNSVSTSSL 572


>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
          Length = 572

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 175/429 (40%), Positives = 260/429 (60%), Gaps = 24/429 (5%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT PIS+  PTEA+ + +  L + L     +ES  + +KR +VL  ++ I  ++VK +
Sbjct: 7   FGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRYKVLESLQAICDEFVKRV 66

Query: 76  TRLRG-YSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
            R +   +D ++++A   +FT+GS+RLGV GPG+DID L V P YV+RE D+F    ++L
Sbjct: 67  AREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKYFPDLL 125

Query: 135 AEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDV 190
             M     +T+L  V DA VP++KF++ G+SIDL+++ I +  +  D  D+ D  +L  +
Sbjct: 126 EAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY N+ GF GGV WA+LV
Sbjct: 186 DEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V++FF V + WRWP PV+L  I+   L   VW+P+  + D  H M
Sbjct: 246 ARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           P+ITPAYP M +++N+S S++ ++  + + G  I E + + K  WS LF  + FF S Y+
Sbjct: 306 PVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFFTSDYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 429
            Y+ V   + + +    W G+VES++R L          KL+ HP        S   AH 
Sbjct: 366 YYISVISASKSKEAHNVWSGYVESKVRMLV--------QKLEQHP--------SIALAH- 408

Query: 430 AFFMGLQRK 438
           AF  G +R+
Sbjct: 409 AFNKGYERR 417


>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
           50506]
 gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
           50506]
          Length = 505

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 283/488 (57%), Gaps = 26/488 (5%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGVT P+SM   TE +M+ + E++ +L E G +E  +E + RE+VLG++  + +++V  
Sbjct: 9   KYGVTGPLSMKESTEKEMKLSEEMDMYLQERGFFEDDKEGQTRERVLGKLNFMVREFVAR 68

Query: 75  LTRLRGYSDQMVEDA-NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + + RG  D   E A    IFTFGSYRLGVHG G DIDALC+ P +V+R  DFF   +  
Sbjct: 69  MGKGRGSGDG--EKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTHFYEE 125

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L     + E+  + DA VP++KF+F G+ IDL++A ++  VV++ +++ + ++L  +DE 
Sbjct: 126 LKGDPNIKEVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEK 185

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            + SLNG RV D++L LVPNV  F + LRC+K+WAKRR VY N  G+ GGV ++L VARV
Sbjct: 186 CILSLNGSRVTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARV 245

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA    +V +FF +++ W+WP PV+L  + +      VWDP+    DK H MP+I
Sbjct: 246 CQLYPNASSFSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRMPVI 305

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M +++NVS ST  V+  +F   + I    E N   +  +F+   FF  Y+ + +
Sbjct: 306 TPAYPSMCATHNVSNSTQHVISMEFARAHEILSSPEKN--DFRKIFDLSDFFSRYKLFAE 363

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-------------V 420
           +  ++   +    W+G+VES++R L    E      L   P+P  +             +
Sbjct: 364 ILAMSTEEEGFPKWEGYVESKVRILASKFEA-VDDILYAIPFPKAFRVAEENIGKIKYGM 422

Query: 421 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR 480
              K C   AFF+ +   P     +G++  +   V+EF   +N Y   +  M I ++ ++
Sbjct: 423 QDLKKCT--AFFIAIDVIP----VKGKKVVVEQQVKEFVDFMNEYEGKERSMRIEINSLK 476

Query: 481 RKQIPPYV 488
           +K +  ++
Sbjct: 477 KKDVQNFL 484


>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
          Length = 570

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 174/429 (40%), Positives = 260/429 (60%), Gaps = 24/429 (5%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT PIS+  PTEA+ + +  L + L     +ES  + +KR +VL  ++ I  ++VK +
Sbjct: 7   FGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRFKVLESLQAICDEFVKRV 66

Query: 76  TRLRG-YSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
            R +   +D ++++A   +FT+GS+RLGV GPG+DID L V P YV+R+ D+F    ++L
Sbjct: 67  AREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRD-DYFKYFPDLL 125

Query: 135 AEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDV 190
             M     +T+L  V DA VP++KF++ G+SIDL+++ I +  +  D  D+ D  +L  +
Sbjct: 126 EAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY N+ GF GGV WA+LV
Sbjct: 186 DEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V++FF V + WRWP PV+L  I+   L   VW+P+  + D  H M
Sbjct: 246 ARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           P+ITPAYP M +++N+S S++ ++  + + G  I E + + K  WS LF  + FF S Y+
Sbjct: 306 PVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFFTSDYK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 429
            Y+ V   + + +    W G+VES++R L          KL+ HP        S   AH 
Sbjct: 366 YYISVISASKSKEAHNVWSGYVESKVRMLV--------QKLEQHP--------SIALAH- 408

Query: 430 AFFMGLQRK 438
           AF  G +R+
Sbjct: 409 AFNKGYERR 417


>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 579

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 169/395 (42%), Positives = 246/395 (62%), Gaps = 6/395 (1%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           + P  K  GVT P++ A PT AD   N EL   L     YE+ EE  KR  VL  ++ I 
Sbjct: 2   ATPYAKALGVTPPLTSAAPTAADEAANDELISELKRQNNYETPEETAKRSAVLKSLQAIT 61

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           +++V+++TR +G ++  V+ A   I TFGS++LGV GPG+DID L V P  +++ E FF 
Sbjct: 62  EEFVRQVTRAQGSAESAVKSAGGKIETFGSFKLGVIGPGSDIDTLVVVPKNITKAE-FFQ 120

Query: 129 ILHNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRL-VVREDLDISDM 184
               I+ +      +TEL    DA+VP++ FKF G+ IDLL+  I+ L  + +DL ++D 
Sbjct: 121 FFPEIMEKSTPPGTITELMSKPDAYVPILTFKFSGVDIDLLFGRIASLNQIPKDLKMTDH 180

Query: 185 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
            +L  ++E   RSLNG RVAD++L LVP  + F T LR +K W+ RRG+  N+ GF GGV
Sbjct: 181 DLLRGLEEQEARSLNGVRVADEMLTLVPQTKVFRTALRTIKLWSARRGIVGNIYGFPGGV 240

Query: 245 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 304
            WA+LVARVCQLYP A  S +V +FF++   W+WP PV+L  I+   L   VW+P+ N  
Sbjct: 241 AWAILVARVCQLYPKATGSTIVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHT 300

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 364
           D+ H MPIITPAYP M +++NV+ ST+ V+  + + G  I + V + KA+W  LFE + F
Sbjct: 301 DRRHIMPIITPAYPSMCTTHNVTRSTMAVIHKELKRGGEIADRVMMGKAKWKDLFEKHTF 360

Query: 365 F-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
           F  SY+ YL +   + +++    W G+VES++R L
Sbjct: 361 FTSSYKYYLCIITASTSSEAQTKWAGFVESKVRLL 395


>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
 gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
          Length = 652

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 166/400 (41%), Positives = 245/400 (61%), Gaps = 11/400 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           + YGVT PIS A PTE +   N+ L   L   G +ES+ E EKR++VL ++ +I   +V+
Sbjct: 4   RTYGVTPPISTALPTEQEKALNKALHDELRAQGTFESRAETEKRKEVLAQLEKITNAFVQ 63

Query: 74  ELTRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
              R + G +  ++ DA   +FT+GSYRLGV+GPG+D+D L V P YV+ E+ +F I   
Sbjct: 64  RAAREKHGKNAILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPE 122

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV---VREDLDISDMSV 186
           +L EM     +T+L PV +A VP++KF+F G+SIDL++ SI  L+     +   ++D ++
Sbjct: 123 VLVEMAPPAAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNL 182

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  + E  VRSLNG RV D+IL LVP    F   LR +K WA+R+ +Y+N+ G+ GGV W
Sbjct: 183 LRGLSENAVRSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAW 242

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE--AELGFSVWDPRKNRR 304
           A+LVARVCQLYP A  +++V++FF +   W WP PV+L  I+         VW+P+    
Sbjct: 243 AMLVARVCQLYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYAS 302

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 364
           D+ H MPIITPAYP M +++NV  S++ V+  + + G  + EE+ L +  W  LF  + F
Sbjct: 303 DRNHKMPIITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKHTF 362

Query: 365 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           F S ++ YL V   +        W G++ESR+R L   IE
Sbjct: 363 FTSGFKYYLTVISSSRTKKAQNVWSGFIESRVRLLVNKIE 402


>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
          Length = 575

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 165/399 (41%), Positives = 251/399 (62%), Gaps = 11/399 (2%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKRE----QVLGRIRQIAKDW 71
           YGVT PIS+  PTEA+ + +  L + L     +ES  + +KR     +VL  +++I  ++
Sbjct: 7   YGVTPPISVTLPTEAEKRASDALIEELRRQKTFESPSDTDKRHSFRYKVLASLQEICNEF 66

Query: 72  VKELTRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           V+++ R +   ++ ++++A   +FT+GS+RLGV GPG+DID L V P YV+RE D+F   
Sbjct: 67  VRKVAREKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKHF 125

Query: 131 HNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD-ISDMSV 186
            ++L  M     +T+L  V DA VP++KF++  +SIDL+++ I +  +  D D + D S+
Sbjct: 126 PDLLVSMAPPGSITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFDNLKDSSL 185

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  +DE  +RSLNG RV D+IL LVP    F   LR +K WA+RR VY+N+ GF GGV W
Sbjct: 186 LRGLDEAELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFPGGVAW 245

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVARVCQLYP A  S++V++FF V   WRWP PV+L  I    L   VW+P+  + D 
Sbjct: 246 AMLVARVCQLYPKAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDS 305

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MP+ITPAYP M +++N++ S++ V+  + + G  I E++ + K  WS LF  + FF 
Sbjct: 306 FHLMPVITPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFT 365

Query: 367 S-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           S YR Y+ V   + + +    W G+VES++R L   +E+
Sbjct: 366 SGYRYYISVVSASKDKEAHKVWSGYVESKVRMLVQKLEQ 404


>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 675

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 169/411 (41%), Positives = 248/411 (60%), Gaps = 19/411 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+GVT PIS A PTE + + +  L K L   G +ES  E  KRE+VL  + +I   +VK
Sbjct: 5   RQWGVTPPISTALPTENEKRLHDALHKELRAQGTFESPAERAKREKVLAELEKITNVFVK 64

Query: 74  ELTRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
              + +   +  ++ DA   +FT+GSYRLGV+GPG+DID L V P YV+ E+ +F I   
Sbjct: 65  RAAQEKQPKNSILIRDAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKYVTVEQ-YFRIFPQ 123

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV---VREDLDISDMSV 186
           +L EM     + +L PV +A VP++KF+FDG+SIDL++ SI  L+      +  ++D ++
Sbjct: 124 VLVEMAPPGAIKDLTPVPEAFVPIIKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNL 183

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  + E  VRSLNG RV D+IL LVP    F   LR +K WA+R+ +Y+N+ GF GGV W
Sbjct: 184 LRGLSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAW 243

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRR 304
           A+LVARVCQLYP A  +++V++FF +   W WP PV+L  I+        +VW+P+    
Sbjct: 244 AMLVARVCQLYPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYAS 303

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 364
           D+ H MPIITPAYP M +++NV  ST+ V+  + + G  I +E+ + +  W  LF  + F
Sbjct: 304 DRNHKMPIITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDLFTKHTF 363

Query: 365 FES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
           F + ++ YL V   +       AW G++ESR+R L          KL+ HP
Sbjct: 364 FTNGFKYYLTVISSSRTKQAQNAWSGFIESRVRLLV--------NKLEMHP 406


>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
          Length = 694

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 217/651 (33%), Positives = 339/651 (52%), Gaps = 56/651 (8%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           K I    P   D++++ +L+ F+ E    ES     +R  +L  +R I + WVK++   +
Sbjct: 18  KAIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDK 77

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           G  ++M  DA   I   GSYRLGV+ PGADID +CV P +V+RE DFF  L  I  +  +
Sbjct: 78  GVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLQHPK 136

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           V+ L  +  A VP++ F ++ ++IDL  A + R  + E+L+I D  VL  VD  T +SLN
Sbjct: 137 VSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLN 196

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           G RV + ++KL PN E F + LR ++ WAKRRG+YSN  G+LGGVNW +LV  + QLYP 
Sbjct: 197 GPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPT 256

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A PS L+ RFF V   W+WP  + LC   +A LG  VW+      ++   MPI+TPAYP 
Sbjct: 257 AAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HNRYQVMPILTPAYPS 315

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYLFFESYRNYLQVDIV 377
           MNSS+NVST +L VM ++F+ G TI ++V L+K  ++W  LFEP  FF  +++YL V++ 
Sbjct: 316 MNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSDFFAVHQHYLAVEVY 374

Query: 378 AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPHEYVDTSKPCA---- 427
               ++  AW G+ ESR+R+L   +E   Y    C        +P  +V   +  A    
Sbjct: 375 TEKQEEEAAWCGFCESRMRKL---VESLAYNPALCRLRAYTKKFPLSFVTGGEAPAGEQP 431

Query: 428 -----------HCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK--PGMEI 474
                         F++G      ++    ++  I  SVE FK + ++Y + K  P M++
Sbjct: 432 NGAALAQPSKFGVCFYVGFDIDRRQL--RSREVSIDNSVEYFK-NNDLYRWNKRTPTMDV 488

Query: 475 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD---- 530
            V+ +  K +P  VF +   R    R+A ++   +   + +            S D    
Sbjct: 489 RVTPVVWKALPESVFEDMGGRAVA-RVARREFMKKKKEDEKKAEEAAAPSPSPSGDEGTH 547

Query: 531 --QDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSN 588
             +DG E   S   QK  SL+ D      + +G GS  +P  PD      E+  G +  N
Sbjct: 548 SQEDGDELSCS---QKAASLAND------MANGKGSISQPGSPDPAADGAEVTNGTESVN 598

Query: 589 SS------VITSVTSEVGSCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSD 633
           ++      V++S + E+    D   +++AG+   +   +  + N  S+ ++
Sbjct: 599 NTPVKPKKVVSSGSPEMTGKRDRDGKALAGAGSPDVKPLGAALNSASTSTN 649


>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 579

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 183/526 (34%), Positives = 283/526 (53%), Gaps = 46/526 (8%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT  IS A PTE D+++N  L   L +  ++E+ E +++RE VL  I+ + +++
Sbjct: 7   PTRQFGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEF 66

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           V+ + + +G    +++ A   IFTFGS+ LGVHGP +DID L V P +VS + DFF I  
Sbjct: 67  VRRVGKKKGVQQSIIDAAGGKIFTFGSFALGVHGPKSDIDTLVVAPKFVSID-DFFAIFP 125

Query: 132 NILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI-SRLVVREDLDISDMSVL 187
           +   E+   +++ E  PV DA VP++K ++ G+SIDLL+ S+  R  +  ++   +   L
Sbjct: 126 STFKELCNEKDIQEFVPVEDAFVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIEKKDL 185

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             + E   RS+NG RV +++L  VP    F   LR +K W+ RRG+Y  V G+ GGV WA
Sbjct: 186 EGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWA 245

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           ++VAR+CQLYP A  + +VS+FF +   W WP PVML  I+E ++G  VW+P+    D+ 
Sbjct: 246 IMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRA 305

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPA+P M +++ V  STLR+M ++F   ++I +++  NK  W ALFE + FF +
Sbjct: 306 HLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHTFFTK 365

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY------PHEYV 420
            ++ YL V   +   +    + G V+S++R +   I+    G     PY       H   
Sbjct: 366 DHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRIT 425

Query: 421 DTS-KPCAH-----------------------------CAFFMGLQRKPGEVVQEGQQFD 450
           D   K  A                                F++GL    GE     +  D
Sbjct: 426 DDQFKEVAQGSLDYLIPKSEADAEGTLEANGDTTIVHTTTFYIGLTLPTGEAT---KSLD 482

Query: 451 IRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 495
           I   V +FK  I +  ++ +  M + V H R   +P  VF EG  R
Sbjct: 483 ISYPVSQFKSYITDSDLYNEDLMSVKVVHTRSSALPDDVFVEGETR 528


>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
 gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
          Length = 575

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 188/530 (35%), Positives = 288/530 (54%), Gaps = 48/530 (9%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           M  P  PK +G+T  IS A PTEAD + N  L + L    ++E+ E +++RE+VL  +++
Sbjct: 1   MDEPKKPK-WGITHSISEAPPTEADNKLNDNLIETLTRLNVFETLEGNKRREEVLAHVQK 59

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           + +++V+   +L+G +   ++ A   IF FGSY LGVHGP +DID L V P +V  E DF
Sbjct: 60  VVEEFVRRAGKLKGIAQSTLDVAGGKIFFFGSYALGVHGPTSDIDTLIVVPKHVFIE-DF 118

Query: 127 FFILHNILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDIS 182
           F I  +I  E+   E+++EL PV DA+VP++K ++ G+S+DLL+AS+  +  V ++L+  
Sbjct: 119 FKIFPSIFRELSNAEDISELVPVEDAYVPIIKMEYRGVSLDLLFASMPTMSSVPKELETV 178

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D SVL  ++E T+RS+NG RV  ++L  VP   HF   LR +K WA RR +Y  V G+ G
Sbjct: 179 DKSVLRHLEETTIRSVNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPG 238

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN 302
           G+ WA++VAR+CQLYP A  + ++S+FF +   W+WP PVML   +  E G  VW+P   
Sbjct: 239 GIAWAIMVARICQLYPMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQ 298

Query: 303 RR--DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
               D  H MP+ITPA+P M S++ V+TST ++MM++FQ  + I  +V   +  W ALF 
Sbjct: 299 SYPPDARHLMPVITPAFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFN 358

Query: 361 PYLFF-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            + FF + ++ YL V   +   +  L + G V+S++R L   I+    G     P+P  +
Sbjct: 359 NHSFFTQDHKYYLSVIAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGF 418

Query: 420 -------------------VDTSKPCAHC--------------AFFMGLQRKPGEVVQEG 446
                              +D   P +                 F++GL R P    +E 
Sbjct: 419 ERVHRCKNEDEVEAVTKGSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGL-RLP----KER 473

Query: 447 QQFDIRGSVEEFKLSINMYMFWKPG-MEICVSHIRRKQIPPYVFPEGYKR 495
              DI      F+  I     +  G M + V H R   +P  +F  G  R
Sbjct: 474 STLDISYITNHFRSKITESKLYDEGTMSVKVVHTRNTALPDDLFKPGEVR 523


>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
          Length = 501

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 169/423 (39%), Positives = 260/423 (61%), Gaps = 21/423 (4%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           M+S  P  +YG+T P S+   T+   Q   +++K+L E+  +ES++  + RE+VLGR+  
Sbjct: 1   MNSANP--KYGITGPASLKESTQESTQLANQMDKYLRESNFFESEDAGQTRERVLGRLDF 58

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           + K +V E T   G      ++    IFTFGSYRLGVH  GADID LCV P +VSR+ DF
Sbjct: 59  LVKKFV-EKTAPEGEQ----KNYGGKIFTFGSYRLGVHDRGADIDVLCVVPRHVSRK-DF 112

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F I +  L + E V E+  + DA+VP++   +DG+ IDL +A ++  V+ E++ + + ++
Sbjct: 113 FTIFYEELGQDENVKEISKIEDAYVPIISLTYDGIPIDLTFARLNLPVIAENISLLNDTI 172

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  +DE  + SLNG RV D IL+L+P V+ F + LR +KFWAKRR +Y N  G+ GGV +
Sbjct: 173 LRSMDEKCILSLNGSRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGVTF 232

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           ++ VAR+CQ+YPN     +V +FF  Y+ W+WP PV LC+I +      VWDP+    DK
Sbjct: 233 SICVARICQMYPNLCAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADK 292

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MP+ITP YP +NS++NV+ ST  ++  +   GN    E+  +KA +S LFE   FF+
Sbjct: 293 YHKMPVITPVYPSINSTHNVTQSTFILICSELARGN----ELMRSKAPFSKLFEVSGFFK 348

Query: 367 SYRNYLQVDIVAANADDLLA---WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 423
            ++ +++V I   N++DL A   W+G+++S++R L   +E      L   P+P  +  T 
Sbjct: 349 KHKMFIEVRI---NSEDLQAFNIWEGYIQSKIRILCTKLENLENISLAA-PFPKAF--TG 402

Query: 424 KPC 426
           + C
Sbjct: 403 RSC 405


>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
 gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
          Length = 593

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 163/430 (37%), Positives = 256/430 (59%), Gaps = 23/430 (5%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  +Q+G+T P+S A PT +++  N  L   L     +E+  E EKR+Q L  ++++  +
Sbjct: 4   PQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEAPSETEKRKQTLHLLQRVTIE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGP-----------------GADIDAL 113
           ++K +++ +G S   ++ +   IFT+GSYRLGV+GP                 G+DID L
Sbjct: 64  FIKVVSKEKGLSQAAIDVSGGKIFTYGSYRLGVYGPAVMNGDISLMYSLRQFAGSDIDTL 123

Query: 114 CVGPSYVSREEDFFFILHNIL---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI 170
            V P +V RE DFF     +L   A  + + ++ PV DA VP++K +  G+SIDL++A +
Sbjct: 124 VVAPKHVMRE-DFFAHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARL 182

Query: 171 SRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKR 230
               V  +LD+ +  +L  +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+R
Sbjct: 183 IVPSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQR 242

Query: 231 RGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA 290
           R +YSN+ GF GGV WA+LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++ 
Sbjct: 243 RAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDG 302

Query: 291 ELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL 350
            L   VW+P+    D+ H MPIITPAYP M +++N+S ST  V++ + + G  + + + +
Sbjct: 303 PLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELRRGGDMVDNIFV 362

Query: 351 NKAQWSALFEPYLFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGK 409
            + +WS LF  + FF   Y+ YL ++  +   +    W G VES+LR L   ++R +  +
Sbjct: 363 GQRRWSDLFARHSFFSGDYKYYLSINSTSTTKEAQAIWSGLVESKLRHLVGALDRKSSIE 422

Query: 410 LQCHPYPHEY 419
           +  HP+P  +
Sbjct: 423 I-AHPFPKGF 431


>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
           IPO323]
 gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
           IPO323]
          Length = 559

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 162/394 (41%), Positives = 247/394 (62%), Gaps = 5/394 (1%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           QYGV+ PIS   P   D+  +  L + L     +ES +E +KR  VL R++++    V+ 
Sbjct: 8   QYGVSPPISTDPPKPQDLALSESLMEELKAQNNFESPDETKKRGDVLARLQKLLHQLVQI 67

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           + + +   +++++++   IFT+GSYRLGV+GPG+DID L V P +V+RE DFF  +  +L
Sbjct: 68  VGKQKKLPNEILKESGGKIFTYGSYRLGVYGPGSDIDTLMVAPRHVTRE-DFFEHMPTLL 126

Query: 135 AEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +    +E+TEL PV    VP++K +  G+SIDL+++++ R  V ++L+++D ++L  + 
Sbjct: 127 RQATTPDELTELTPVPGITVPIIKLELCGVSIDLIFSALDRASVPKNLELTDNNLLRGLT 186

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E  +R +NG RV D+IL+LVP    F   LR +K WA+RR +Y NV GF GGV +A++VA
Sbjct: 187 EVDLRCVNGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGVAYAMMVA 246

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R+CQLYP A   M+V +FF V + W+WP  + L   ++  L    WDP  NR DK H MP
Sbjct: 247 RICQLYPRAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMP 306

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRN 370
           +ITPAYPCMNS+ ++  ST  V++ + + G+ I EE+   K QW  LF    FF E+Y++
Sbjct: 307 VITPAYPCMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKFFSEAYQH 366

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           Y+ V       +   AW G V+SRLR+L   IE+
Sbjct: 367 YICVITAGKTKEAQQAWSGLVQSRLRRLIQGIEQ 400


>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
          Length = 587

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 185/555 (33%), Positives = 285/555 (51%), Gaps = 80/555 (14%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  KQ+G T PIS A PT +++  N  L   L     +E+  E EKR Q+L  I+++  +
Sbjct: 4   PQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRVTVE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +VK + R +G S   ++ +   IF +GSYRLGV+GPG+DID L VGP +V+ E DFF   
Sbjct: 64  FVKTVGRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFFLDF 122

Query: 131 HNILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
              L  M   + + +L PV DA+VP++K +  G+SIDL++A +    +  DLD+ +  +L
Sbjct: 123 PPTLERMAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELL 182

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +DE  +R +NG RV D+IL+LVP  + F   LR +K WA+             GV WA
Sbjct: 183 RGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGVAWA 230

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVARVCQLYP A  S++V +FFR+   W WP PV+L  I++  L   VW+P+    D+ 
Sbjct: 231 MLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRF 290

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPAYP M +++NVS ST  V++ + + G  I E++ L + +WS LF  + FF +
Sbjct: 291 HLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSK 350

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY------- 419
            Y+ YL +   + + +    W G VE++LR L + +++     +  HP+P  +       
Sbjct: 351 DYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKASIDV-AHPFPKGFERVHSCK 409

Query: 420 ------------------------VDTSKPCAHCA------------------------- 430
                                    D +   AH A                         
Sbjct: 410 DEKEIEVAKSGLTRFQVKGTKTATTDETNDPAHVAALESANGSINMPGLGQTEDSNNHTL 469

Query: 431 ----FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIP 485
               +++GL+ KP  V    +  DI      FK     +  ++PG+ ++ ++H+R   +P
Sbjct: 470 HTTTYYIGLELKP-LVPGASRSLDISSETHMFKNMCTSWAQYQPGINDVTITHVRNYDLP 528

Query: 486 PYVFPEGYKRTRHPR 500
             VF  G  R   P+
Sbjct: 529 EDVFHPGETRPVRPK 543


>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
 gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
           adhaerens]
          Length = 405

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 172/407 (42%), Positives = 248/407 (60%), Gaps = 9/407 (2%)

Query: 31  DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDAN 90
           D++    L + ++   + ES +E + R  VL ++ Q+ K W+ +++  +     +     
Sbjct: 1   DIKLTDALIQAIIPFDVIESNDEMQHRMNVLAKVNQLVKQWIVDVSLSKNMPLSIANSVG 60

Query: 91  ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
             +FTFGSYRLGVH  GADIDALCV P +V R   FF    ++L    EVT++  V DA 
Sbjct: 61  GNVFTFGSYRLGVHTKGADIDALCVAPRHVDRTS-FFASFVDLLKSQTEVTQITVVEDAF 119

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           VPV+K  FDG+ +D+L+A +    + E+LD+ D+ +L ++D   VRSLNGCRV D IL L
Sbjct: 120 VPVIKMVFDGIEMDMLFARLGLQNIPENLDLLDLELLRNLDMKCVRSLNGCRVTDAILSL 179

Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 270
           VPN + F T LR +K WAKRRG+YSN  G+LGGV+WA+LVAR CQLYPNAV + +V +FF
Sbjct: 180 VPNADSFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAVAATIVQKFF 239

Query: 271 RVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTST 330
            V+  W W  PV+L  + E++L  + W P  N  D++  M IITP YP  NS++NVS ST
Sbjct: 240 LVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTFNVSKST 298

Query: 331 LRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 390
             +++++ + G  IC E+ L  A+W+  FEP  FF  Y++Y+ +   A + D+   W G 
Sbjct: 299 KTILLEEIERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVLTAKATSEDNYKEWIGL 358

Query: 391 VESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA------HCAF 431
           VES+LR+L L +ER+ Y  +  H  P  Y    +  A      HC F
Sbjct: 359 VESKLRKLVLTLERNEYFDI-VHINPKSYPGDPQRYAFWFKLLHCIF 404


>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
 gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
          Length = 691

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 215/646 (33%), Positives = 335/646 (51%), Gaps = 56/646 (8%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           K I    P   D++++ +L+ ++ E    ES     +R  +L  +R I + WVK++   +
Sbjct: 18  KAIRTTPPEPKDLEQSAKLQTYMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEK 77

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           G  ++M  DA   I   GSYRLGV+ PGADID +CV P +V+RE DFF  L  I  +  +
Sbjct: 78  GVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLKHPK 136

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           V++L  +  A VP++ F ++ ++IDL  A + R  + E+L+I D  VL  VD  T +SLN
Sbjct: 137 VSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLN 196

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           G RV + ++KL PN E F + LR ++ WAKRRG+YSN  G+LGGVNW +LV  + QLYP 
Sbjct: 197 GPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPT 256

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A PS L+ RFF V   W+WP  + LC   +A+LG  VW+      ++   MPI+TPAYP 
Sbjct: 257 AAPSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HNRYQVMPILTPAYPS 315

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYLFFESYRNYLQVDIV 377
           MNSS+NVST +L VM ++F+ G TI ++V L+K  ++W  LFEP  FF  +++YL V++ 
Sbjct: 316 MNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSEFFAVHQHYLAVEVY 374

Query: 378 AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPHEYV----------D 421
               D+  AW  + ESR+R+L   +E   Y    C        +   YV           
Sbjct: 375 TEKQDEEQAWCSFCESRMRKL---VESLAYNPALCRLRVYTKKFSLSYVTAGEAPVGGQS 431

Query: 422 TSKPCAH-----CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK--PGMEI 474
             +P A        F++G      ++    ++  I  SVE FK + ++Y + K  P M++
Sbjct: 432 NGQPPAQPSKFGACFYVGFDIDRRQL--RSREVSIDSSVEYFK-NNDLYRWNKRTPTMDV 488

Query: 475 CVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGP 534
            V+ +  K +P  VF E   RT     A+++   +   E +  +       P     +G 
Sbjct: 489 RVTPVLWKALPESVFEEMGGRTVA--RAARREFMKKKKEEEKKAEEAAAPSPSPSGDEGT 546

Query: 535 EKRQS----ISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSS 590
             ++        QK  SL+      + + +G GS  +P  PD        A+GG+V+ + 
Sbjct: 547 HSQEDGDDLTCSQKAASLA------TEMANGKGSISQPGSPDP------AADGGEVNGTD 594

Query: 591 VITSVTSEVGSCEDVGNESVAGSSEGNNGSVEG----SNNPVSSQS 632
            + +   +        +    G  + ++ +VEG      NP+S  S
Sbjct: 595 SVNNTPVKAKQVVSTTSPEKTGKRDRDDKAVEGVGGSDGNPLSDNS 640


>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
          Length = 496

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/438 (42%), Positives = 258/438 (58%), Gaps = 20/438 (4%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P Q      IS   P   D+  ++ELEKFL   GLYE+ E  ++R+ VL  + ++ K+W 
Sbjct: 6   PMQQHFGAVISDREPESKDLAASQELEKFLKAMGLYENAEGSKRRKAVLLMLLKLVKEWS 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            ++    G   + V  A   + TFGSY LGVH P ADID LC+ P + SRE  FF     
Sbjct: 66  GKIAAEEGLDKEEVSPAT--LKTFGSYHLGVHTPDADIDVLCLAPRHCSRE-SFFTSFCQ 122

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           IL    E+ EL PV +A+ PV+KFK  G+SID+L+ S+    +    ++     L  +D+
Sbjct: 123 ILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDD 182

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             VRSLNG RVA+ IL LVPN + F TTLR +K WA+RRG+YSNV G LGGVNWA+LVA 
Sbjct: 183 AGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAF 242

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG----------FSVWDPRKN 302
           V Q YPNA PS+L+++FF +Y  W+WPN V L  +   +             +VW+P  N
Sbjct: 243 VVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVAN 302

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
            RDK H MPIITPAYP MNSSYNV    +R++ ++   G  I + + L  A W+ LFE  
Sbjct: 303 PRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWANLFERS 362

Query: 363 LFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY----PHE 418
            FF  +  Y+QVDI A +A D   W GW+ESR+R  + ++  D    ++ +P+    P+ 
Sbjct: 363 DFFWRFELYVQVDISARSAADHRLWFGWIESRMR--SFLVCLDQIDMVEAYPFVNPLPNP 420

Query: 419 YVDTSKPCA-HCAFFMGL 435
           Y+  ++  A   +FF+GL
Sbjct: 421 YLTNAETGAVGNSFFIGL 438


>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 539

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 172/460 (37%), Positives = 267/460 (58%), Gaps = 10/460 (2%)

Query: 42  LVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRL 101
           L +  L+E       RE VL ++ +I K++        G  +   +     + TFGSYRL
Sbjct: 31  LKDLQLFEDGNRLMSRELVLKKVDKILKEFALHEAINEGIEEMQAKKLRIQLKTFGSYRL 90

Query: 102 GVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGL 161
           G H P ADID LC+ P + +R + FF  L  +L     V++L  + +A VPV+KFK DG+
Sbjct: 91  GCHHPDADIDVLCLAPRHCTRVK-FFQKLPILLEVSSFVSDLHVIPNAFVPVIKFKVDGI 149

Query: 162 SIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL 221
           ++D+L++ +    + E ++I D   LN +D+ +VRSLNGCRV ++IL+L+ + E+F  TL
Sbjct: 150 AVDMLFSCLYLESIPEHINILDDQFLNGLDDVSVRSLNGCRVTEKILQLISHQEYFRITL 209

Query: 222 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
             +K+WA+ RG+YSNV GFLGGVN A++ A+VCQLYP+A+P  L+ +FF +Y +W WPNP
Sbjct: 210 TAIKYWARNRGIYSNVLGFLGGVNLAIMAAKVCQLYPDALPPTLLIKFFHLYHLWNWPNP 269

Query: 282 VMLC-AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
           + +   I+  +LGF  W+P+   +D+ H MPIITP YP +NSSYNV +STL VM  +F+ 
Sbjct: 270 LSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSSYNVMSSTLDVMKTEFKN 329

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 400
            +     V      WS L     FF+ YR++LQV I + + +D   W  WVESRLR   +
Sbjct: 330 ASLQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEEDFGRWVTWVESRLRTFFI 389

Query: 401 MIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGLQ-RKPGEVVQEGQQ----FDIRGS 454
            +E   + +++  P+   +       A+ + FF+ L  ++P +  Q  Q+     D   +
Sbjct: 390 RLEAIPFVRIR--PFARFFNFQELKGAYISWFFVALDFQRPEDKRQNAQEPELTIDFSDA 447

Query: 455 VEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYK 494
           V  F   ++ +      M++ V H+ R QIP +V    Y+
Sbjct: 448 VRAFANHVDQWEERNSTMDLEVKHVVRSQIPAWVIDATYR 487


>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
 gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
          Length = 566

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 184/526 (34%), Positives = 280/526 (53%), Gaps = 46/526 (8%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT  IS A PTE D+++N  L   L +  ++E+ E +++RE VL  I+ + +++
Sbjct: 7   PTRQFGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEF 66

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           V+ + R +G    +++ A   IFTFGS+ LGVHGP +DID L V P +VS + DFF +  
Sbjct: 67  VRRVGRKKGVQQPIIDAAGGKIFTFGSFALGVHGPSSDIDTLVVAPKFVSID-DFFALFP 125

Query: 132 NILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI-SRLVVREDLDISDMSVL 187
               E+   +++ E  PV DA VP++K ++ G+SIDLL+ S+  R  +   +   D   L
Sbjct: 126 PTFRELCDEKDIQEFVPVEDAFVPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTIDKKDL 185

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             + E   RS+NG RV +++L  VP    F   LR +K W+ RRG+Y  V G+ GGV WA
Sbjct: 186 EGLSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWA 245

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           ++VAR+CQLYP A  + +VS+FF +   W WP PVML  I+E ++G  VW+P+    D+ 
Sbjct: 246 IMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRA 305

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-E 366
           H MPIITPA+P M +++ V  STLR+M ++F   + I +++  NK  W ALFE + FF +
Sbjct: 306 HLMPIITPAFPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHTFFTK 365

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY------PHEYV 420
            ++ YL V   +   +    + G V+S++R +   I+    G     PY       H   
Sbjct: 366 DHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRIT 425

Query: 421 DTS-KPCAHCAF-----------------------------FMGLQRKPGEVVQEGQQFD 450
           D   K  A  +                              ++GL    GE     +  D
Sbjct: 426 DDQFKEVAQGSLDYHIPKSEMDAEGALEANGDTTVVYTTTFYIGLTLPTGEAT---KSLD 482

Query: 451 IRGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 495
           I   V +FK  I +  +F +  M + V H R   +P  VF EG  R
Sbjct: 483 ISYPVSQFKSYITDSDLFNEDLMSVKVVHTRSSALPDDVFVEGETR 528


>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
          Length = 677

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 185/509 (36%), Positives = 284/509 (55%), Gaps = 40/509 (7%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P K     K I +  P   D++++++L+ ++ +    E+     +R  +L  +R I +DW
Sbjct: 10  PSKLEQAYKAIRVTPPEPIDLEQSKKLKDYMDKHFPTENMVNITRRSLILAELRTIFRDW 69

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           VK++   +G  +++  DA  LI   GSYRLGV+ PGADID +CV P  ++RE DFF  L 
Sbjct: 70  VKQVCIRKGVPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITRE-DFFTSLK 128

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            I  +  +VT L  +  A VP++ F ++ ++IDL  A + R  + EDL+I +  +L  VD
Sbjct: 129 KIFMQHSKVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVD 188

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
             T +SLNG RV + ++KL PN + F + LR ++ WAKRRG+YSN  G+LGGVNW +LV 
Sbjct: 189 AATEKSLNGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVC 248

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
            + QLYP A P+ L+ RFF V   W+WP  + LC  ++ +LG  VW+      ++ H MP
Sbjct: 249 FINQLYPTAAPTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NNRYHVMP 307

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK--AQWSALFEPYLFFESYR 369
           I+TPAYP MNSS+NVST +L VM  +F+    I +E+ LN+   +W  LFE   FF   +
Sbjct: 308 ILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEI-LNRGAVEWDPLFESSDFFAVQQ 366

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH------PYPHEYV--- 420
           +YL VD+   N +D  AW  + ESR+R+L   IE   Y  + CH       +P  +V   
Sbjct: 367 HYLAVDVYTTNREDEQAWCSFCESRIRKL---IESLAYIPMLCHLRAFPKRFPLSFVGQD 423

Query: 421 ----------------DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM 464
                           +T K  A   F++G      ++    ++  I  SV+ FK + ++
Sbjct: 424 QDEKIETPTDRNNEEKETFKYGA--CFYVGFDIDRRQL--RSREVSIDSSVDYFKHN-DL 478

Query: 465 YMFWK--PGMEICVSHIRRKQIPPYVFPE 491
           Y + K    M++ ++ +  K +P YVF E
Sbjct: 479 YRWNKRSDSMDVRITPVLWKNLPDYVFEE 507


>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
           42464]
 gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
           42464]
          Length = 654

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 167/409 (40%), Positives = 246/409 (60%), Gaps = 19/409 (4%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS A PTE + + N  L + L   G +ES  E EKR++VL ++ +I   +V+  
Sbjct: 6   YGVTPPISTALPTEEEKRLNNALHQELRAQGTFESPAETEKRKEVLRQLEKITNVFVQRA 65

Query: 76  TRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
              +   +  ++ DA   +FT+GSYRLGV+GPG+D+D L V P YV+ E+ +F I   +L
Sbjct: 66  AAEKEPKNTILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPEVL 124

Query: 135 AEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASI---SRLVVREDLDISDMSVLN 188
            EM     +T+L PV +A VP++KF+F G+SIDL++ SI    +L   ++  ++D ++L 
Sbjct: 125 VEMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLR 184

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            + E  VRSLNG RV D IL LVP    F   LR +K WA+R+ +Y+N+ G+ GGV WA+
Sbjct: 185 GLSENEVRSLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAM 244

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA--ELGFSVWDPRKNRRDK 306
           LVARVCQLYP A  +++V++FF +   W WP PV+L  I+        +VW+P+    D+
Sbjct: 245 LVARVCQLYPKATSAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDR 304

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MPIITP+YP M +++NV  S++ V+ D+ + G  + E++   K  W  LF  + FF 
Sbjct: 305 NHRMPIITPSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDLFTKHTFFT 364

Query: 367 S-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
           S +R YL V   +        W G+VESR+R L          KL+ HP
Sbjct: 365 SGFRYYLTVISSSRTKKAQNVWSGFVESRVRLLV--------NKLEMHP 405


>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
 gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
          Length = 632

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/413 (40%), Positives = 254/413 (61%), Gaps = 19/413 (4%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P    GVT PIS A PT+A+ ++   L K L   G +ES+ E +KR  VL  +++I  ++
Sbjct: 4   PEHTLGVTPPISTALPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEF 63

Query: 72  VKELTRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           VK   + +  ++  ++ DA   IFT+GS+RLGV+GPG+DID L V P YV+ ++ +F I 
Sbjct: 64  VKRAAQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFDIF 122

Query: 131 HNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASIS---RLVVREDLDISDM 184
            N+L EM     +T+L PV +A VP++KF++ G+SIDL++ SI    +L   +D +++  
Sbjct: 123 PNLLVEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSN 182

Query: 185 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
           ++L  + E  VRSLNG RV D+IL LVP  + F   LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 183 NLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGV 242

Query: 245 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKN 302
            WA+LVARVCQLYP A  +++V +FF +   W WP PV+L  I+  ++    +VW+P+  
Sbjct: 243 AWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIY 302

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITP+YP M +++NV  S++ V+  + + G  I EE+ L K  W  LFE +
Sbjct: 303 PSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKH 362

Query: 363 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
            FF + ++ YL V       +    W G+VESR+R L          KL+ HP
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLV--------QKLELHP 407


>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 633

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 170/444 (38%), Positives = 261/444 (58%), Gaps = 28/444 (6%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q GVT P+S++ P+E ++Q    L   L     +ES  E EKR +VL  ++ IA  +VK
Sbjct: 5   RQLGVTPPVSVSLPSEFELQATDALLAELRAQNSFESPLETEKRHRVLASLQTIADAFVK 64

Query: 74  ELTRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            + + R  ++  +++DA A +F +GS RLGV GPG+DID L VGP YV+RE D+F    +
Sbjct: 65  VVAKEREPHNAVLIKDARAKVFAYGSLRLGVWGPGSDIDTLVVGPRYVTRE-DYFQHFPD 123

Query: 133 ILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLY---ASISRLVVREDLDISDMSV 186
           +L +M     +T+L  V +A VP++KF++ G+SIDL++   A++ +L       + D ++
Sbjct: 124 LLVKMAPPGAITDLTVVEEAFVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNL 183

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  +DE  +RS+NG RV D+IL LVP    F T LR +K WA+RR +Y N+ GF GGV W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAW 243

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVARVCQLYP A  S++V++FF +   W WP PV+L  I +  L   VW+PR  + D 
Sbjct: 244 AMLVARVCQLYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDS 303

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 365
            H MP+ITPAYP M +++NV+ S++ V+  + Q    I   +  +   W  +F  + FF 
Sbjct: 304 YHLMPVITPAYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTFFT 363

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           + ++ Y+QV   + + +    W G+VES++R L   +ER            HE +  ++P
Sbjct: 364 KDFKYYMQVISASRDKEAHKIWSGFVESKVRMLVQSLER------------HESIAVARP 411

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQF 449
                F  G +R      + G+QF
Sbjct: 412 -----FIKGFER--FHRYRNGEQF 428


>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
 gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
          Length = 632

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 168/413 (40%), Positives = 254/413 (61%), Gaps = 19/413 (4%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  GVT PIS   PT+A+ ++   L K L   G +ES+ E +KR  VL  +++I  ++
Sbjct: 4   PEQTLGVTPPISTTLPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEF 63

Query: 72  VKELTRLR-GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           VK   + +  ++  ++ DA   IFT+GS+RLGV+GPG+DID L V P YV+ ++ +F I 
Sbjct: 64  VKRAAQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFDIF 122

Query: 131 HNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASIS---RLVVREDLDISDM 184
            N+L EM     +T+L PV +A VP++KF++ G+SIDL++ SI    +L   +D +++  
Sbjct: 123 PNLLVEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSN 182

Query: 185 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
           ++L  + E  VRSLNG RV D+IL LVP  + F   LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 183 NLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGV 242

Query: 245 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKN 302
            WA+LVARVCQLYP A  +++V +FF +   W WP PV+L  I+  ++    +VW+P+  
Sbjct: 243 AWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIY 302

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITP+YP M +++NV  S++ V+  + + G  I EE+ L K  W  LFE +
Sbjct: 303 PSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKH 362

Query: 363 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
            FF + ++ YL V       +    W G+VESR+R L          KL+ HP
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLV--------QKLELHP 407


>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
 gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
          Length = 577

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 159/411 (38%), Positives = 248/411 (60%), Gaps = 6/411 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  KQYGVT  IS AGP   + + N  L + L    ++E+ E ++KR+ V+  ++ + ++
Sbjct: 4   PKNKQYGVTSAISTAGPGPEEAKLNDSLVETLTRKNVFETPEGNKKRDDVIRHLQTVVEE 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           +V+ + + +G     ++ A   +FTFGSY LGVHGP +DID+L V P  VS + DFF   
Sbjct: 64  FVRRVCKQKGVKQAAIDVAGGKVFTFGSYALGVHGPTSDIDSLVVVPKQVSID-DFFRNF 122

Query: 131 HNILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV-VREDLDISDMSV 186
            +I  EM   E++TEL PV DA VP++K ++ G+S+DL++AS+ +L  V  D++  +   
Sbjct: 123 PSIFREMSKSEDITELNPVEDAFVPIIKMEYRGVSLDLIFASLPKLSSVPRDMETIEKKN 182

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L+ + E  +RS+NG RV  ++L  VP+   F   LR +K W+  RG+Y  V G+ GGV W
Sbjct: 183 LDGLAEQAMRSVNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAW 242

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A++VAR+CQLYP A  + +VS+FF +   W WP PV+L  I+E  +G  VW+P+    D+
Sbjct: 243 AIMVARICQLYPFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDR 302

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 365
           +H MPIITPA+P M S++ V  STLR+M ++FQ  + I + +      W ALFE + FF 
Sbjct: 303 SHLMPIITPAFPSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFT 362

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 416
           + ++ YL +   +   +    + G V+S++R +   I+    G     PYP
Sbjct: 363 KDHKYYLTIVAASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYP 413


>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
          Length = 590

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 163/447 (36%), Positives = 268/447 (59%), Gaps = 20/447 (4%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +++GVT PIS A PT+A++  +  L   L     +E+ EE EKR   L  +++  +++V+
Sbjct: 7   RRWGVTDPISRAPPTDAELALDATLLDELRSQNTFEAPEETEKRGAALQTLQKAVEEFVR 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            + +++G +  ++++A   I TFGSYRLGV+GPG+DID L + P +V+R+ DFF    N+
Sbjct: 67  HVGQVKGLAPSVIDNAGGKICTFGSYRLGVYGPGSDIDTLVLAPKHVTRD-DFFAHFINV 125

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A    + +  PV DA  P++K  F G+ IDL++A ++   V  DLD+ D S+L  +
Sbjct: 126 LERVAPSGAIEKFSPVPDAFTPIIKMDFMGIDIDLIFARLAIASVPLDLDLKDNSLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +RS+NG RV D++L LVP  + F    R +K WA+RR +Y+N+ GF GG+ WA++V
Sbjct: 186 DETDLRSVNGTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGIAWAMMV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR+CQLYP A  ++++ RFF + + W WP P+ML  I++  L   VW+P+    DK H M
Sbjct: 246 ARICQLYPMACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKRHLM 305

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           PIITPAYP M +++N++ ST +V+  +    + I  ++   K +W  LF+ + FF + ++
Sbjct: 306 PIITPAYPSMCATHNITHSTQKVIKRELLRASQITSDILSEKRRWRDLFDRHTFFTQDFK 365

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 429
            YL +   + + +    W   VES++R+L  +IE+           P E V+ ++P    
Sbjct: 366 YYLSIVAASHDKEAQDNWSSSVESKVRKLVGLIEQS----------PAEDVELAQP---- 411

Query: 430 AFFMGLQRKPGEVVQEGQQFDIRGSVE 456
            F  G +R      +E ++  ++GSV+
Sbjct: 412 -FNKGFKRVHHCKTEEEKEEVLQGSVK 437


>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
           NZE10]
          Length = 610

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 163/407 (40%), Positives = 254/407 (62%), Gaps = 10/407 (2%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV+ P+S   PTE D++ + +L   L     +E  E  +KRE+VL ++  + K+ V+++ 
Sbjct: 9   GVSAPLSTDSPTERDLKLSADLMTELKAQNNFEPPEATQKREEVLVKLEGLLKELVRKVG 68

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           + +G  +++++ A   IFT+GSYRL V GPG+DIDAL + P +V+RE DFF  + +++ +
Sbjct: 69  KSKGLPEEILQQAGGKIFTYGSYRLKVFGPGSDIDALMIAPRHVTRE-DFFKYMPDMIRQ 127

Query: 137 ---MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
               E++TEL PV  A+VP++K + DG+++DL+++++    V +DL + D ++L  + E 
Sbjct: 128 STPTEQLTELVPVEAANVPIIKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNLLRGLSET 187

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            +R +NG RV D++L+LVP  + F   LR +K WA RRGVY NV GF GGV +A++V R+
Sbjct: 188 DLRCVNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGVGYAMMVVRM 247

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPI 312
           CQLYP A   ++V++FF V   WRWP+PV LC  + A +LG  V    +N  +K   MPI
Sbjct: 248 CQLYPRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMPI 307

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNY 371
           ITP +PCMN++  ++ S L V++ +FQ    I  ++   K +W ALF    FF E Y++Y
Sbjct: 308 ITPVFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQTFFTEDYKHY 367

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIE---RDTYGKLQCHPY 415
           L +   +   +   AW G+V SRLR+L   IE     T  KL  HP+
Sbjct: 368 LCLVTGSRTKEAQQAWSGFVSSRLRKLVSSIESPQSKTAVKL-IHPF 413


>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
          Length = 603

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 158/365 (43%), Positives = 227/365 (62%), Gaps = 8/365 (2%)

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           +  L+ V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L  +D   +RSLN
Sbjct: 6   IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 65

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR CQLYPN
Sbjct: 66  GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 125

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H MPIITPAYP 
Sbjct: 126 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 185

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
            NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  FF+ YR+Y+ +   A+
Sbjct: 186 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASAS 245

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGL 435
             ++ L W G VES++R L   +ER+ +  L  H  P  +    +      +    F+G+
Sbjct: 246 TEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYISMWFLGI 304

Query: 436 ---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
              + +  E V     +DI+   +      N     K GM+I  +H+++KQ+  Y+  E 
Sbjct: 305 IFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEI 364

Query: 493 YKRTR 497
            ++ +
Sbjct: 365 LQKKK 369


>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 173/467 (37%), Positives = 268/467 (57%), Gaps = 18/467 (3%)

Query: 31  DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDAN 90
           + +R+  L +F+   GL  S EE+ KR+ V+ ++++I   WVK +   R    Q +   +
Sbjct: 113 EHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTS 172

Query: 91  ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
           A I T+GSY LGVHGP +DIDALCVGP + S  +DFF +L N+L    EV+E+  V DA 
Sbjct: 173 ATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAK 232

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           VP+M+FKFDG+S+DL YA +  L V E+L++ +   L ++DE + +SL+G R  + IL+L
Sbjct: 233 VPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQL 292

Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 270
           VPNVE+F + LRC+K WAKRRGVY N+ G+ GGV+ A+L A VCQ  P+A  ++L+S FF
Sbjct: 293 VPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFF 352

Query: 271 RVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTST 330
           + ++ W WP PV   A+++  L      P    R+    MPI  P  P      N++ ST
Sbjct: 353 KTFSGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKST 403

Query: 331 LRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 390
              +  +   G+ +  ++      W+ +FEP+ + + Y  ++++ + ++N D+L  W GW
Sbjct: 404 FYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGW 463

Query: 391 VESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFD 450
           V+SR R L   +E +  G   C P P E++D      +  FF G+Q  PG +       D
Sbjct: 464 VKSRFRFLLAKVE-EVQG--LCDPNPTEFIDPDAGEPNVVFFWGVQ--PGRI----NFSD 514

Query: 451 IRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTR 497
           I    ++F  +IN   +  P  ++ +S I   Q+P Y   +   R R
Sbjct: 515 IDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLDTGSRNR 561


>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
 gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
          Length = 631

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 168/394 (42%), Positives = 235/394 (59%), Gaps = 18/394 (4%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           G+T  IS+A     D  +  EL+K L          E   R ++L ++  + K    +  
Sbjct: 244 GMTSAISLAETKPEDHTKTVELQKAL----------ELNHRMEILPKLNTLVKH--AQCF 291

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
            L+ +    V      I+TFGSYRLGV+  GA+IDALCV P  + R  D+F     +L +
Sbjct: 292 HLKEH----VAKLGGKIYTFGSYRLGVNHKGANIDALCVAPRNIERL-DYFGSFFELLKK 346

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
             EVTE + V +A VPV+K  FDG+ IDLL+A ++   +  + D+ D  +L ++D   VR
Sbjct: 347 QPEVTECRAVEEALVPVVKMNFDGIKIDLLFARLALKEIPNNFDLGDDMLLKNLDPKLVR 406

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SLNGCR  D+IL+LVPN+++F   LR +K WAK+ G+YSN  G+ GGV+W +LVAR CQL
Sbjct: 407 SLNGCRATDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL 466

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
            PN V +  V +FF V+  W+WP PV L   D   LGF VWD R N +D+ H MPIITPA
Sbjct: 467 -PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITPA 525

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI 376
           YP  NS+++VS+ST +VM+++F  G  I +E+ L KA W  LFE   FF  YR  + + +
Sbjct: 526 YPQPNSTFHVSSSTRKVMLNEFNSGMQITDEIMLGKAGWDKLFEAPSFFFKYRYVIVLLV 585

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 410
            + N DD L W   VES++R L   +ER  +  L
Sbjct: 586 TSNNTDDHLEWCEMVESKIRYLIQNLERILHINL 619


>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
 gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
          Length = 616

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/399 (40%), Positives = 245/399 (61%), Gaps = 9/399 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q GVT P+S+  PTE + Q    L   L     +E   E EKR  VL  +++IA  +VK
Sbjct: 5   RQLGVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVK 64

Query: 74  ELTRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            + R +   +  +++DA   +F +GS RLGV GPG+DID L V P YV+RE D+F     
Sbjct: 65  TVARKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPG 123

Query: 133 ILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLY---ASISRLVVREDLDISDMSV 186
           +L EM     +T+L  V+DA VP++KF+F G+SIDL++   A++ +L    + ++SD ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  +DE  +RS+NG RV D+I+ LVP    F T LR +K WA+RR +Y N+ GF GGV W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVARVCQLYP A  S++V++FF +   W WP PV+L AI++  L   +W+P+    D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 365
            H MPIITPAYP M +++N++ S+  V+  +      +   + + K  W  LF+ + FF 
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFT 363

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           + ++ Y+QV   + + +    W G+VES++R L   +ER
Sbjct: 364 KDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 402


>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
          Length = 621

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 170/379 (44%), Positives = 236/379 (62%), Gaps = 15/379 (3%)

Query: 116 GPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVV 175
            P +V R  DFF   +  L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   +
Sbjct: 2   APRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTI 60

Query: 176 REDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYS 235
            EDLD+ D S+L ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YS
Sbjct: 61  PEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYS 120

Query: 236 NVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS 295
           N+ GFLGGV+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   
Sbjct: 121 NILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLP 180

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 355
           VWDPR N  D+ H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+W
Sbjct: 181 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 240

Query: 356 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL----- 410
           S LFE   FF+ Y++Y+ +   A      L W G VES++R L   +E++ +  L     
Sbjct: 241 SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNP 300

Query: 411 QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMY 465
           Q  P P E  D  K      + +GL  K  E   E    D+   ++ F     + +IN  
Sbjct: 301 QSFPAPKENPD--KEEYRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSK 357

Query: 466 MFWKPGMEICVSHIRRKQI 484
           MF +  M+I   H++RKQ+
Sbjct: 358 MF-EMDMKIAARHVKRKQL 375


>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
 gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 171/455 (37%), Positives = 264/455 (58%), Gaps = 18/455 (3%)

Query: 33  QRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANAL 92
           +R+  L +F+   GL  S EE+ KR+ V+ ++++I   WVK +   R    Q +   +A 
Sbjct: 74  RRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQRQRPKQQIAVTSAT 133

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
           I T+GSY LGVHGP +DIDALCVGP + S  +DFF +L N+L    EV+E+  V DA VP
Sbjct: 134 ILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVP 193

Query: 153 VMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP 212
           +M+FKFDG+S+DL YA +  L V E+L++ +   L ++DE + +SL+G R  + IL+LVP
Sbjct: 194 LMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVP 253

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRV 272
           NVE+F + LRC+K WAKRRGVY N+ G+ GGV+ A+L A VCQ  P+A  ++L+S FF+ 
Sbjct: 254 NVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKT 313

Query: 273 YTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 332
           ++ W WP PV   A+++  L      P    R+    MPI  P  P      N++ ST  
Sbjct: 314 FSGWPWPTPV---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFY 364

Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
            +  +   G+ +  ++      W+ +FEP+ + + Y  ++++ + ++N D+L  W GWV+
Sbjct: 365 RITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVK 424

Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 452
           SR R L   +E +  G   C P P E++D      +  FF G+Q  PG +       DI 
Sbjct: 425 SRFRFLLAKVE-EVQG--LCDPNPTEFIDPDAGGPNVVFFWGVQ--PGRI----NFSDID 475

Query: 453 GSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPY 487
              ++F  +IN   +  P  ++ +S I   Q+P Y
Sbjct: 476 VVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510


>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
          Length = 611

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 161/399 (40%), Positives = 245/399 (61%), Gaps = 9/399 (2%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q GVT P+S+  PTE + Q    L   L     +E   E EKR  VL  +++IA  +VK
Sbjct: 5   RQLGVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVK 64

Query: 74  ELTRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
            + R +   +  +++DA   +F +GS RLGV GPG+DID L V P YV+RE D+F     
Sbjct: 65  TVARKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPG 123

Query: 133 ILAEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLY---ASISRLVVREDLDISDMSV 186
           +L EM     +T+L  V+DA VP++KF+F G+SIDL++   A++ +L    + ++SD ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L  +DE  +RS+NG RV D+I+ LVP    F T LR +K WA+RR +Y N+ GF GGV W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVARVCQLYP A  S++V++FF +   W WP PV+L AI++  L   +W+P+    D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF- 365
            H MPIITPAYP M +++N++ S+  V+  +      +   + + K  W  LF+ + FF 
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFT 363

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           + ++ Y+QV   + + +    W G+VES++R L   +ER
Sbjct: 364 KDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 402


>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
 gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
          Length = 395

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 159/389 (40%), Positives = 237/389 (60%), Gaps = 14/389 (3%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           +T  IS+A P   D  +  EL+K L    ++E + +   R ++L ++  + K WV+ ++ 
Sbjct: 1   MTSAISLAEPKTEDHTKTVELQKSLEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNVSI 60

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF--FFILHNILA 135
            +   + + E     I+TFGSYRL V+  G +IDALCV P  + R++ F  FF L     
Sbjct: 61  SKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQDYFGSFFEL----- 115

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
            +++  E + V +A VPV+K KFDG+ IDLL+A ++   + ++ D+ +  +L ++D   V
Sbjct: 116 -LKKQPEYRAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLV 174

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSLNGCR  D+IL+ VPN+++F   LR +K WAK+ G+YSN  G+ GGV+W +LVAR CQ
Sbjct: 175 RSLNGCRATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQ 234

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           L PN V +  V +FF V+  W+WP PV L   D   LGF VWD R N +D+ H M IITP
Sbjct: 235 L-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITP 293

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
           AYP  NS+++VS+ST +VM+++F     I +E+ L KA W  LFE   FF  YR ++ + 
Sbjct: 294 AYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLL 353

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIER 404
           + + N DD L      ES++R L   +ER
Sbjct: 354 VTSNNTDDHLE-----ESKIRYLIQNLER 377


>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
           10762]
          Length = 594

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 154/394 (39%), Positives = 236/394 (59%), Gaps = 5/394 (1%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQ+GVT+P S   PT AD++ N  L   L     +    + E+R+ V+ +++ + +  V+
Sbjct: 5   KQWGVTQPFSNDAPTPADLKLNDSLIAELKAQDNFPPSSDTERRDAVIAKLKGLLRQMVQ 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            + + +G    ++E A   ++T+GS+RLGV+GP +D+D L V P +V+REE FF  + ++
Sbjct: 65  IVGKKKGLPAGILETAGGEVYTYGSFRLGVYGPNSDVDTLMVAPKHVTREE-FFEYMPDL 123

Query: 134 L---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L   A   E+TEL PV     P++K K  G+ IDL++ S+    V + +D++D ++L  +
Sbjct: 124 LRKSAAPGEITELVPVPGIGTPIIKLKIQGVDIDLIFCSLQVQSVPDKMDLADDNLLRGL 183

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D+  VR +NG RV ++IL+LVP  + F   LR +K WA+RR +Y N+ G+ GGV WA+LV
Sbjct: 184 DDTDVRCVNGTRVTNRILQLVPQTKTFRYALRAIKLWAQRRAIYGNIVGYPGGVAWAILV 243

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP AV  ++V RFF +   W WP PV L    E+ L    WDP  +R D  H M
Sbjct: 244 ARVCQLYPKAVAPLIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLM 303

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YR 369
           PI+TPA P  N+++ V  ST  VMM + + G  I  ++      W ALFE + FF + Y+
Sbjct: 304 PILTPAVPSTNTAHTVGPSTKMVMMRELERGEQIIADIYSKSKPWKALFERHNFFTTAYK 363

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           +Y+ V   + + D   AW G V+S+++ L   IE
Sbjct: 364 HYICVVTASKSKDAQDAWAGLVQSKIKWLVQGIE 397


>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
 gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 632

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 169/413 (40%), Positives = 251/413 (60%), Gaps = 19/413 (4%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P    GVT PIS A PT+A+ ++   L K L   G +ES+ E EKR  VL  +++I  ++
Sbjct: 4   PEHSLGVTPPISTALPTDAEKRQTDALFKELRAQGTFESQAETEKRWAVLADLQRITDEF 63

Query: 72  VKELTR-LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           VK   +    ++  ++ DA   IFT+GS+RLGV+GPG+DID L V P YV+ ++ +F I 
Sbjct: 64  VKRAAQESEPHNSILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFDIF 122

Query: 131 HNILAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRED---LDISDM 184
             +L EM     +T+L PV +A VP++KF++ G+SIDL++ SI  L    D    ++++ 
Sbjct: 123 PKLLEEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNN 182

Query: 185 SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
           ++L  + E  VRSLNG RV D+IL LVP  + F   LR +K WA+RR +Y+N+ G+ GGV
Sbjct: 183 NLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGV 242

Query: 245 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID--EAELGFSVWDPRKN 302
            WA+LVARVCQLYP A  +++V +FF +   W WP PV+L  I+  ++    +VW+P+  
Sbjct: 243 AWAMLVARVCQLYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIY 302

Query: 303 RRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY 362
             D+ H MPIITP+YP M +++NV  S++ V+  + + G  I EE+ L K  W  LFE +
Sbjct: 303 PSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKH 362

Query: 363 LFFES-YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
            FF + ++ YL V       +    W G+VESR+R L          KL+ HP
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLV--------QKLELHP 407


>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
           heterostrophus C5]
          Length = 578

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 178/525 (33%), Positives = 282/525 (53%), Gaps = 45/525 (8%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT  IS A PTE D++ N +L + L    ++E+ E + +RE+V+  I+++ +++
Sbjct: 7   PSRQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEF 66

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           ++ + + +G    +++ A   IFTFGSY LGVHGP +DID L V P +V+  E F F   
Sbjct: 67  IRRVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPP 126

Query: 132 NI--LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI-SRLVVREDLDISDMSVLN 188
               ++ ++++ E  PV DA VP++K ++  +SIDLL+AS+  R  +  ++D  +   L 
Sbjct: 127 TFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLE 186

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            + E   RS+NG RV +++L  VP    F   LR +K W+ RRG+Y  V G+ GGV WA+
Sbjct: 187 GLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAI 246

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           +VAR+CQLYP A  + +VS+FF +   W WP PVML  I+E +LG  VW+P+    D+ H
Sbjct: 247 MVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAH 306

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPA+P M +++ V  STLR+M D+F   + I + +      W+ALFE + FF + 
Sbjct: 307 LMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKD 366

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH---------- 417
           ++ YL V   +   +    + G V+S++R +   I+    G     PY +          
Sbjct: 367 HKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKD 426

Query: 418 -----------EYV--------DTSKPC---AH----CAFFMGLQRKPGEVVQEGQQFDI 451
                      EY+        D + P     H      F++GL   P       +  DI
Sbjct: 427 DQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLTLPPDAT----KSLDI 482

Query: 452 RGSVEEFKLSI-NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKR 495
              V +F+  I +  ++ +  M + V H R   +P  VF  G  R
Sbjct: 483 SYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527


>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
           ND90Pr]
          Length = 571

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 155/408 (37%), Positives = 245/408 (60%), Gaps = 4/408 (0%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +Q+GVT  IS A PTE D++ N +L + L    ++E+ E + +RE+V+  I+++ +++
Sbjct: 7   PSRQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEF 66

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           ++ + + +G    +++ A   IFTFGSY LGVHGP +DID L V P +V+  E F F   
Sbjct: 67  IRRVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPP 126

Query: 132 NI--LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI-SRLVVREDLDISDMSVLN 188
               ++ ++++ E  PV DA VP++K ++  +SIDLL+AS+  R  +  ++D  +   L 
Sbjct: 127 TFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLE 186

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            + E   RS+NG RV +++L  VP    F   LR +K W+ RRG+Y  V G+ GGV WA+
Sbjct: 187 GLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAI 246

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           +VAR+CQLYP A  + +VS+FF +   W WP PVML  I+E +LG  VW+P+    D+ H
Sbjct: 247 MVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAH 306

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ES 367
            MPIITPA+P M +++ V  STLR+M D+F   + I + +      W+ALFE + FF + 
Sbjct: 307 LMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKD 366

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           ++ YL V   +   +    + G V+S++R +   I+    G     PY
Sbjct: 367 HKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPY 414


>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 612

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 156/394 (39%), Positives = 244/394 (61%), Gaps = 5/394 (1%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           Q+GV+ P+S A P+  D +    L   L     +ES EE  KR  VL +++++ +  V++
Sbjct: 8   QFGVSSPLSTAPPSRQDTELGETLLTELKAQNNFESPEETAKRNSVLQKLQKLLQKLVQD 67

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           + + +G S +++++A   IFT+GSYRLGV+GPG+DID+L V P +VSR+ DFF  +  ++
Sbjct: 68  VGKKKGMSPELLKEAGGKIFTYGSYRLGVYGPGSDIDSLMVAPKHVSRD-DFFERMPGMI 126

Query: 135 AEM---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
                 EE+TE+  V  A VP++K K  G+ IDL++A++ R  +  +LD+ D ++L  +D
Sbjct: 127 RATFKPEEITEMVVVAAAAVPIIKTKLMGVDIDLIFANLQRDSIPTNLDLGDTNLLRGLD 186

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           +  ++ +NG RV D+IL LVP    F   LR +K WA++R VY  +  + GGV + ++VA
Sbjct: 187 DTDLKCVNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGVAYGMIVA 246

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           RVCQLYPNA    +V +FF +   W WP+P+ L A ++  LG + WDP  N  DK H MP
Sbjct: 247 RVCQLYPNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMP 306

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRN 370
           +ITPAYPCMNS++ ++ ST+ V+  +   G  I  E+   K  W  LF  + FF ++Y++
Sbjct: 307 VITPAYPCMNSTHTITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAKHTFFSDAYQH 366

Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           Y+ +   A   D   AW G V+SR+++L   IE+
Sbjct: 367 YICIITAARTKDAQQAWSGLVQSRVKRLLAGIEQ 400


>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
 gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
          Length = 492

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 160/404 (39%), Positives = 238/404 (58%), Gaps = 11/404 (2%)

Query: 33  QRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANAL 92
           +R+  L KF+   GL  S  E+EKR+ V+  ++QI   W K++   R      +   NA 
Sbjct: 4   ERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIASTNAT 63

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
           I T+GSY LGV+GP +DIDA+CVGP + +  EDFF +L N+L    EV+ +  V DA VP
Sbjct: 64  ILTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVP 123

Query: 153 VMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP 212
           +M+FKFDG+SIDL YA +  L V +++D+ +   L ++DE + +SL+G R   +IL+ VP
Sbjct: 124 LMRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVP 183

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRV 272
           N+E+F + LRC+K WA+RRGV  N+ GFLGGV+ A+L A VCQ YPNA  S L+S FF  
Sbjct: 184 NLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFAT 243

Query: 273 YTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 332
           Y  W WP PVML      + G S   P ++  +    MPI  P  P      N++ ST  
Sbjct: 244 YATWPWPTPVML------QDGMS--SPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYY 295

Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
            +  +F  G+++ +++      W+ +FEP+ + + Y  ++++ + A + D++  W GWV+
Sbjct: 296 RIRTEFLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVK 355

Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
           SR R L L +E     + QC P P EY D      +  F+ GL 
Sbjct: 356 SRFRALLLKLEG---LQGQCDPSPVEYADRDVSEPNVVFYWGLN 396


>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
 gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
          Length = 473

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 174/476 (36%), Positives = 275/476 (57%), Gaps = 20/476 (4%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           ++GVT P ++   T+  +++++ L  FL E   +ES+E+ + RE+ LGR+  + K +V++
Sbjct: 9   KHGVTGPATLDSSTKDSLEKSKILINFLKENDFFESEEDAKTRERALGRLSFLLKKFVRQ 68

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
            +  +G +    +D   +I TFGSYRLGVH  GADIDALCV P ++SR+ DFF I +N L
Sbjct: 69  QSLSKGET----KDCGGIICTFGSYRLGVHDKGADIDALCVVPRHISRK-DFFNIFYNQL 123

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
            E   VTEL  V DA+VPV+K  +  + IDL  A ++  VV  +LD+ + ++L  +DE  
Sbjct: 124 LEDSNVTELSKVEDAYVPVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKTMDEKC 183

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           + S+NG RV D +L L+PN E F   LR +KFWAKRR +Y N  G+ GGV +++ VAR+C
Sbjct: 184 ILSINGSRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSISVARIC 243

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
           QLYPN     +V ++F  Y+ W WP P++L  I +      VWD +K   D+ H MPIIT
Sbjct: 244 QLYPNKSSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIIT 303

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PAYP M S++NV  ST  ++  +F+    I     +N   +  +F+   FF  Y+ Y+ +
Sbjct: 304 PAYPSMCSTHNVFQSTFDLICREFRRSTEIINN-SINSTDFLQIFDNTDFFRKYKLYINI 362

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMG 434
             V A+ + + +W G+VES++R L    E      +   P+P  ++        C FF+G
Sbjct: 363 K-VKADKESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPFIKDET----CNFFIG 416

Query: 435 LQRKPGEVVQEGQQ---FDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPY 487
           +     E+++ G Q     + G ++EF   +N +      M+I +S  ++K +  +
Sbjct: 417 I-----EILKTGSQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF 467


>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
 gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
          Length = 642

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 154/262 (58%), Positives = 191/262 (72%), Gaps = 7/262 (2%)

Query: 347 EVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDT 406
           ++ELNK QWSALFEPYLFFE+Y+NYLQVDIVAA+A DLLAWKGWVESRLRQLTL IERDT
Sbjct: 210 KIELNKEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDT 269

Query: 407 YGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYM 466
            G LQCHPYP+EY+D SK CAHCAFFMGLQRK G   QEGQQFDIRG+V+EF+  INMY+
Sbjct: 270 DGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYL 329

Query: 467 FWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSG---LK 521
            WKPGM+I VSH+RR+Q+P +VFP+GYKR+R  R  +QQ  R+SE+    Q+GS    +K
Sbjct: 330 PWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVK 389

Query: 522 RKKDPESVDQD--GPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQE 579
           RK D E  D     PEKR S SPQ+  S+SP   A  S  +   S+ E VI     +   
Sbjct: 390 RKNDCEMADLKPVKPEKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILGCSTIGDI 449

Query: 580 IAEGGDVSNSSVITSVTSEVGS 601
           ++   DV+++S + S + ++ S
Sbjct: 450 VSNCEDVASNSEVRSTSWQLES 471



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/203 (59%), Positives = 136/203 (66%), Gaps = 48/203 (23%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K+YG+ KPIS+AGPTE D+ RN ELEK        + +  +E+R    G  R    DWVK
Sbjct: 13  KRYGIMKPISVAGPTEPDLHRNAELEK--------QRRGYEERR--CSGPYR---SDWVK 59

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            LTR RGY+DQMVE+ANA+IFTFGSYRLGVHGPGADID LCVGPSYV+RE          
Sbjct: 60  RLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNRE---------- 109

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           LAEMEEVTELQPV DAHVP                         DLDIS+ SVL +VDE 
Sbjct: 110 LAEMEEVTELQPVPDAHVP-------------------------DLDISNGSVLYEVDEQ 144

Query: 194 TVRSLNGCRVADQILKLVPNVEH 216
           TVRSLNGCRVADQILKLVPNVE+
Sbjct: 145 TVRSLNGCRVADQILKLVPNVEY 167


>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
 gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
          Length = 483

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 163/398 (40%), Positives = 237/398 (59%), Gaps = 13/398 (3%)

Query: 42  LVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRL 101
           +V  GL+ S EEDEKR+ ++ +++ I   W K++   R    Q +   +A I T+GSY L
Sbjct: 1   MVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAATSATILTYGSYGL 60

Query: 102 GVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGL 161
           G H P +DIDALCVGP + +  EDFF +LHNIL    E++E+  V D+ VP+M+F FDG+
Sbjct: 61  GFHDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGI 120

Query: 162 SIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL 221
           S+DL YA +  L V E++DI ++S+L ++DE + +SL+G R   +IL LVPN+ +F + L
Sbjct: 121 SVDLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSML 180

Query: 222 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
           RCLK WAKRRGVY N+ GFLGGV+ A+L A VCQ  PNA    L+S FF  Y MW WP P
Sbjct: 181 RCLKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTP 240

Query: 282 VMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
           VML    +  +  +V D  + R     +MPI  P  P      NV+ ST   +  +F  G
Sbjct: 241 VML----QDGMSSNVEDVIETR----FYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRG 292

Query: 342 NTICEEVELNK--AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLT 399
           +++  ++   K  +    +FEP+ +  +Y  ++++ + A + D+L  W GWV+S  R L 
Sbjct: 293 HSMTRDLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLL 352

Query: 400 LMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQR 437
           L +E     +  C P P EYVD      +  F+ GL R
Sbjct: 353 LKLEA---VQGFCDPNPMEYVDMDASEPNVVFYWGLNR 387


>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
          Length = 304

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 201/290 (69%), Gaps = 1/290 (0%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRVLILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303


>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
          Length = 317

 Score =  298 bits (763), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 201/290 (69%), Gaps = 1/290 (0%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303


>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
          Length = 317

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 144/290 (49%), Positives = 201/290 (69%), Gaps = 1/290 (0%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 194 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 253

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR
Sbjct: 254 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303


>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 532

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 180/493 (36%), Positives = 261/493 (52%), Gaps = 44/493 (8%)

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
           + +FGSYRL VH P +DID L + P +++R+ DFF      L     V EL PV  A+ P
Sbjct: 48  LLSFGSYRLSVHTPSSDIDCLVLAPPHLTRD-DFFTTWVTALQNEARVKELHPVSGAYTP 106

Query: 153 VMKFKFDGLSIDLLYASISRLVV--REDLD-ISDM----SVLNDVDEPTVRSLNGCRVAD 205
           V+KF+ +G+ IDL++A ++   +   ++LD I +M    ++L  +DE +VRS+NG RVA 
Sbjct: 107 VIKFEIEGVKIDLIFARLNEPTINNHDELDEIKEMELDDTLLIGLDETSVRSINGVRVAQ 166

Query: 206 QILKLV-------------PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            +L  +               V++F  TLR +K WA+  G+YSNV GFLGGVNWA+LV  
Sbjct: 167 YLLSTLETTDKNRKNYDSATQVDNFRLTLRAVKEWARVHGLYSNVLGFLGGVNWAILVCW 226

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID----EAELGFSVWDPRKNRRDKTH 308
           VC+ YP+A  S L+  FF+ ++ W+WP PV+L        E      VWDP  N RD  H
Sbjct: 227 VCKRYPDAPASTLLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKH 286

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
            MPIITP YP MNSSYNV    LR + D+F   + +C +V     +W  LFE   FF+ +
Sbjct: 287 LMPIITPCYPSMNSSYNVGEPQLRRLRDEFARASKLCSDVAFGTKKWGVLFEWNEFFQQH 346

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP---HEYVDTSKP 425
            NYLQVD VA N DD  AW G  E+R+R L   +E   +G ++ +P+    H   D    
Sbjct: 347 ANYLQVDTVATNEDDFRAWFGLCEARMRLLIAGLESPGFG-VRAYPFAKFFHRREDGGGG 405

Query: 426 CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
               +FF+ L+        +  + D+   V +F   IN +   +P M++ +  + RK +P
Sbjct: 406 NYIASFFIALR-----FANKVWKVDLAPLVTDFLTVINSWDGREPTMDLMIRLVSRKDLP 460

Query: 486 PYVFPEGYKRTRH---PRL------ASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEK 536
            +VF +  KR  H   P L      +S  R+ E+  E Q  +     K  E         
Sbjct: 461 SFVF-DAEKREEHITKPVLKPNNQQSSANRTDEDDVENQVNATTPSAKKNELDGSSTSSP 519

Query: 537 RQSISPQKQDSLS 549
            + ISP K+  +S
Sbjct: 520 SEFISPLKRTRIS 532


>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
          Length = 303

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 144/290 (49%), Positives = 201/290 (69%), Gaps = 1/290 (0%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 1   PPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 60

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 61  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSF 119

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 120 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 179

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LV
Sbjct: 180 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLV 239

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           AR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR
Sbjct: 240 ARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289


>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
          Length = 607

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 152/385 (39%), Positives = 243/385 (63%), Gaps = 6/385 (1%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           GV+ P+S   P   D + + +L   L     +ES EE  KR+ VL +++++    V+ + 
Sbjct: 10  GVSPPLSTEPPKPRDNELHDQLLAELKAQNNFESPEETAKRQNVLVKLQKLLLQLVQRVG 69

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
           + +G + +++++A   IFT+GS+RLGV+GPG+DID L + P +V+RE DFF  + +++ +
Sbjct: 70  KKKGLNPELLKEAGGKIFTYGSFRLGVYGPGSDIDTLMLSPKHVTRE-DFFEYMPDMIRQ 128

Query: 137 M---EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
               E++TEL PV    VP++K + +G+SIDL++ ++ +  V  +L+++D  +L  + E 
Sbjct: 129 AIPAEDITELVPVPGIGVPIIKTEIEGISIDLIWCTLHKDRVPPNLELNDSELLRGLSET 188

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            ++ +NG RV D+IL LVP    F   LR +K WA++RG+Y NV G+ GGV +A++VARV
Sbjct: 189 DLKCVNGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGVAYAMMVARV 248

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNRRDKTHHMPI 312
           CQLYP A  S +V++FF V   W+WP+P+ L A ++   L    WDP+KN RDK H MP+
Sbjct: 249 CQLYPRAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDKRHLMPV 308

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNY 371
           ITPAYP MN+++ ++ ST  V++ +   G+ I  ++   K QW  L   + FF S Y++Y
Sbjct: 309 ITPAYPVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEFFTSAYQHY 368

Query: 372 LQVDIVAANADDLLAWKGWVESRLR 396
           + +   +   DD  AW G V SRLR
Sbjct: 369 IVIVTASKTKDDQQAWAGLVTSRLR 393


>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
          Length = 449

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 178/448 (39%), Positives = 233/448 (52%), Gaps = 43/448 (9%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           SS  P    GVT PI+   P E D   +  L   L E G+YES      R  VL R+R I
Sbjct: 5   SSEAPKAHLGVTPPINTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAI 64

Query: 68  AKDWVKELTRL----RGYSDQMVEDANAL-------IFTFGSYRLGVHGPGADIDALCVG 116
           A  W +    L    R       E A A        + TFGS RL VH P ADID + V 
Sbjct: 65  ADAWCENEWALAIAERACDGADCERALAASAPPRCELRTFGSVRLDVHTPDADIDVVLVA 124

Query: 117 PSYVSREEDFFFILHNILAEMEEVTE--LQPVLDAHVPVMKFKFDGLSIDLLYASISRLV 174
           P + +R   FF  L   L     +    +  V DA+ PV+K +     +DLL+A ++   
Sbjct: 125 PRHCTRRA-FFDTLVAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAPLACDE 183

Query: 175 VREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVY 234
           + E LD+ D +VL  +DE  +RSLNG RVA+ +L LVP+   F   LR +K WA+ +G+Y
Sbjct: 184 LPEPLDVMDDAVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLY 243

Query: 235 SNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI------- 287
           SNV G LGGVN A+L A VCQ YPNA PS +V RFFR++  W WPNPV++ A        
Sbjct: 244 SNVLGLLGGVNCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGAPPSSA 303

Query: 288 -DEAELG-FSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTIC 345
            DE+    ++ W+PR N RD+ H  PI+TPA+P MNSSYNV    LR + D+   G    
Sbjct: 304 GDESVASRYAAWNPRLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETT 363

Query: 346 EEVELNKAQWSA------------------LFEPYLFFESYRNYLQVDIVAANADDLLAW 387
             VE   A W A                  LF P  FF  +R+Y+QVD+ AA+   L  W
Sbjct: 364 RRVEKLAAHWRADESPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDAGLRKW 423

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPY 415
             W ESRLR L + +  DT G ++  P+
Sbjct: 424 NAWCESRLRNLVVAL--DTPGYVRARPH 449


>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
          Length = 1210

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 148/341 (43%), Positives = 221/341 (64%), Gaps = 15/341 (4%)

Query: 7    MSSPP----PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
            MSS P    PP+  G T  +S   PTE D++ ++ELE  L +  ++E+ EE  +R + L 
Sbjct: 871  MSSKPGDEIPPQCLGETGALSFKKPTEQDLKDSQELETTLAQLDIFETPEEITQRREALM 930

Query: 63   RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
            R+++I+  W+K+    +     + +     IFTFGSYRLGV+  GAD+D+L V P +++R
Sbjct: 931  RLQEISNKWIKQKAVEQNLPPHVAKATTGKIFTFGSYRLGVNFKGADVDSLLVVPRFITR 990

Query: 123  EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
            +E FF    ++L+E   V ++  V+DA VPV+K KF G+ IDLL+A I ++ + E+ ++ 
Sbjct: 991  QE-FFSEFQSVLSENPHVEDIHAVVDAFVPVLKLKFMGVEIDLLFAQIDQMNIAENFNLC 1049

Query: 183  DMS--VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
            + +  ++ ++DE  VRS+NG RV + IL LV N   F   L+ ++FWAKRR +YSN  GF
Sbjct: 1050 ENTEVLMRNMDEHDVRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGF 1109

Query: 241  LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE----LGFSV 296
            LGGV+WA+LV+R+CQLYP A PSMLV  FF++++ W WP PV L    E+E    L   V
Sbjct: 1110 LGGVSWAILVSRICQLYPYASPSMLVYLFFKIFSQWPWPKPVRL---RESEYIPSLCLPV 1166

Query: 297  WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQ 337
            WDPR N  D+ H MPI+TP+YP  NS+YNV  S  R+++++
Sbjct: 1167 WDPRLNLMDQYHLMPILTPSYPSQNSAYNVQRSN-RIILER 1206


>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
          Length = 472

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 152/325 (46%), Positives = 222/325 (68%), Gaps = 19/325 (5%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+GVT P+S+  PTE +++   +L K L E  L+E+ +E ++R         I K++V 
Sbjct: 7   QQWGVTAPVSLNKPTEHELKLTNDLLKTLHEYNLFETDKEAKQR---------IVKEFVY 57

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           ++++L+G S+ +   A   IFTFGSY+LGVHG GADID LCV P +V+RE  FF I+ N+
Sbjct: 58  KVSKLQGLSESVARSAGGKIFTFGSYQLGVHGAGADIDTLCVFPQHVTREH-FFSIMFNM 116

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L E+ EVTEL  V++A+VPV++  F G+ ID + A +    + EDLD+SD S+L  ++E 
Sbjct: 117 LNELPEVTELTSVVEAYVPVIRMHFSGIPIDFVCARLLLPSIPEDLDLSDDSLLVGLEEK 176

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            VRS++G RV ++IL+LVP+V  F  +LR +K WAK+RG+YSNV GFLGGV WA+LVARV
Sbjct: 177 CVRSVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAMLVARV 236

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQ+YPNA  + +VSRFF + + W WP PV+L  ++E  +  +         DK H MPII
Sbjct: 237 CQMYPNACTASIVSRFFHIMSKWEWPQPVLLKPMEEGPIYPA---------DKAHRMPII 287

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQF 338
           TP +P M +++NV+ ST  +MM++F
Sbjct: 288 TPGFPSMCATHNVTNSTRSIMMNEF 312


>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 507

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/448 (37%), Positives = 243/448 (54%), Gaps = 20/448 (4%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
           L + +V  GL  S E+ EKR  V+ ++R+I   WVK +          ++  NA I  +G
Sbjct: 23  LRQLMVNEGLIPSLEDQEKRRVVINKLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYG 82

Query: 98  SYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFK 157
           SY LGV+G  +DIDALC+GP + S  EDFF  L ++L    EV+E+  V DA VP+++FK
Sbjct: 83  SYGLGVYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLIRFK 142

Query: 158 FDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHF 217
           FDG+ +DL YA +  L +  ++D+ +   L D+DE + +SL+G R    IL+LVP++E F
Sbjct: 143 FDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELF 202

Query: 218 CTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR 277
            + LRC+K WAKRRGVY N+ GFLGGV+ A+L A VC    NA  S L++ FF ++  W+
Sbjct: 203 QSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQ 262

Query: 278 WPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQ 337
           WP PV+L        G                MPI  P       + N++ ST   +M +
Sbjct: 263 WPTPVVLLEDTYPATG-----------APPGLMPIQLPCGSHQYCNSNITRSTFYKIMAE 311

Query: 338 FQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQ 397
           F  G+ + ++       W  LFE Y +  +Y  + ++ + AAN +DL  W GWV+SR R 
Sbjct: 312 FLRGHNLTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRC 371

Query: 398 LTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEE 457
           L   IE + YG   C P P EYV+T     +  F+ GLQ +   V       DI     E
Sbjct: 372 LLSKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS------DIESVETE 422

Query: 458 FKLSINMYMFWKPGMEICVSHIRRKQIP 485
           F  ++N   F  P   I +S ++  Q+P
Sbjct: 423 FLKNLNSGSFQGPVGRIQLSVVKESQLP 450


>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
           anophagefferens]
          Length = 402

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 233/397 (58%), Gaps = 30/397 (7%)

Query: 49  ESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGA 108
           ES  E  +RE+V+G ++++ + WV+ + + +G SD++  +A   ++T GSYRL VH PGA
Sbjct: 8   ESDGELRRRERVMGELKRLFQAWVRSVCKAKGLSDELASEAGGKLYTSGSYRLRVHEPGA 67

Query: 109 DIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYA 168
           DID++CV P++ +RE DFF  L  +L E  +V  L+ V  A VP+M F  DG++IDLL+A
Sbjct: 68  DIDSICVAPNHCTRE-DFFDTLKAMLLEHPQVENLRSVETAVVPIMTFDLDGVNIDLLFA 126

Query: 169 SISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFW 227
            +    +   LDI + +VL  VDE T +SLNG RV + I KLV  N E F   LR  + W
Sbjct: 127 HLPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARVW 186

Query: 228 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI 287
           AKRRG+YSN  G+ GG+N+ +LVA +CQL+P A PS L+ +FF ++  W WP P +LC  
Sbjct: 187 AKRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCRP 246

Query: 288 DEAELGFSVW--DPRKNRRDKTHH------MPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 339
            +   GF VW  +  + R    +H      MPI+TPAYP MNS+ NV+  +  V+ D+F 
Sbjct: 247 LDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFA 306

Query: 340 YGNTICEEVELNKAQ---------------WSALFEPYLFFESYRNYLQVDIVA-ANADD 383
            G  +C+ +    A+               W  L E   FF+ Y  YL V+++     +D
Sbjct: 307 RGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKED 366

Query: 384 LLAWKGWVESRLRQLTLMIERDTYGKLQ-CHPYPHEY 419
              +KG++ SRLR+L   +E+  +  L+  H +P EY
Sbjct: 367 FDNFKGFLSSRLRKL---VEKMGHLPLKMIHLFPKEY 400


>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 590

 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 156/410 (38%), Positives = 235/410 (57%), Gaps = 39/410 (9%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+GVT PIS A PT +++  N +L   L +   +ES  E E+R+Q L  I+++  ++VK
Sbjct: 7   RQWGVTPPISTALPTTSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRVTVEFVK 66

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            ++R +G S   ++ A   IFT+GSYRLGV+GPG+DID L VGP +VS E DFF     +
Sbjct: 67  VVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFFSDFPPL 125

Query: 134 LAEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           L +M     + +L PV DA VP++K +  G+SIDL+YA +    V  +LD+ +  +L  +
Sbjct: 126 LEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGL 185

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +R +NG RV D+IL+LVP  + F   LR +K WA+RR +YSN+ GF GGV WA+LV
Sbjct: 186 DEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLV 245

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           AR                                  I+E  L   VW+P+    D+ H M
Sbjct: 246 AR---------------------------------PIEEGPLQMKVWNPKIYHGDRYHLM 272

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           PIITPAYP M +++NVS ST  V++ + + G  I +++ L +  W+ LF  + FF + Y+
Sbjct: 273 PIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYK 332

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            YL +   +   +    W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 333 YYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKSSIEV-AHPFPKGF 381


>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
          Length = 629

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 173/485 (35%), Positives = 265/485 (54%), Gaps = 53/485 (10%)

Query: 47  LYESKEEDEKREQVLGRIRQIAKDW----VKELTRLRGYSDQMVEDANALIFTFGSYRLG 102
           L ES++   +R++ + +++++ +DW    VK     +  +     +   ++ +FGSYRLG
Sbjct: 103 LIESEDGTARRKKAMRKLQRMLQDWSGSLVKGKKAKKARAKAAGAETPPILLSFGSYRLG 162

Query: 103 VHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLS 162
           VH P AD+D L + P + +R+ DFF     IL + + V +L PV  A+ PV+KF  DG+ 
Sbjct: 163 VHTPDADVDCLVLAPRHATRD-DFFGSWVRILKQKKGVEDLHPVSSAYTPVIKFVMDGVK 221

Query: 163 IDLLYASISRLV-VRE-------------------DLDISDMSVLNDVDEPTVRSLNGCR 202
           IDL++ASIS  V +RE                   ++D+ D S+L  +DE +VRS+NG R
Sbjct: 222 IDLIFASISNEVWLREHAQCVKSGDGGAEDGGSEREVDVDD-SLLVGLDEASVRSVNGVR 280

Query: 203 VADQILKLVPN---VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           VA  +L  + +   +E++  TLR +K WA+ +G+YSNV G+LGGVNWA+LV  VC  +P+
Sbjct: 281 VAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSNVLGYLGGVNWAILVCFVCIRHPD 340

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL------GFSVWDPRKNRRDKTHHMPII 313
           A  + L+  FF  +  W WP+PVML       +         VWDPR+N RDK H MPII
Sbjct: 341 ASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPVWDPRENYRDKLHVMPII 400

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV-------ELNKAQWSALFEPYLFFE 366
           TP YP MNSS+NV    LR M D+F+    +  E+       E  K  WS+LFE   FF 
Sbjct: 401 TPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGEDGKKGWSSLFERSGFFG 460

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
            +  YL+VD+ A   D+ L W G  E+R+R L   +E D   +++ +P+   Y   +K  
Sbjct: 461 QHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGLESD---EIRAYPFARFYRRDTKEE 517

Query: 427 AHCAFFMGLQRKPGEVVQEGQQFDIRGS--VEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
              +FF+ L+         G   D+R    V E+   +N +     GM++ +  ++R  +
Sbjct: 518 YVSSFFVALR------FASGVDRDVRWGERVSEYLHVVNSFEGRTAGMDLRLELLKRADL 571

Query: 485 PPYVF 489
           P +VF
Sbjct: 572 PRFVF 576


>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
           [Otolemur garnettii]
          Length = 735

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/486 (36%), Positives = 271/486 (55%), Gaps = 19/486 (3%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP +Q G   P+S A P   D +R + L +    +G+ E +EE + R  + G++  + K+
Sbjct: 15  PPQRQCGF--PVSSAAPQGTDCKRLQRLTETXKPSGVSEEEEELQCRILIWGKLNNLVKE 72

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGS---YRLGVHGPGADIDALCVGPSYVSREEDFF 127
           W++ L   +     + E+     F   +   + L     GAD DALC  P +V+   DFF
Sbjct: 73  WIRGLNESKKLPXPVTENVGRNFFLLVNQCHHLLSGLTKGADTDALCAVPRHVN-XRDFF 131

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
              +  L   EEV +L+ V +A VPV+K  FDG  ID+L+A ++   + EDLD+ D S+L
Sbjct: 132 TSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGTKIDILFARLALQTIPEDLDLXDDSLL 191

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             +D   +RSLNGC++ ++IL LV N+++F  TLRC+K WAK   VYSN+ GF+ GV+WA
Sbjct: 192 KRLDIRCIRSLNGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWA 251

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +L AR CQLYP A+ S LV  FF V++ W  PNPV++   ++  L   VWD R N  D+ 
Sbjct: 252 MLGARTCQLYPIAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRY 311

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
              PIITPAYP  NS+Y+ S ST  V++++F+   +I + + L+K + S LFE  +FF+ 
Sbjct: 312 QFAPIITPAYPQQNSTYSASISTQMVVVEEFKXSLSITDXL-LSKVEXSKLFEAPIFFQK 370

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 422
           Y++Y+ +   A      L W G VES++  L   +E++ +  L     Q  P P E  D 
Sbjct: 371 YKDYIVLLAGAPTEKQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDK 430

Query: 423 SKPCAHCAFFMGLQRKPGEVVQE---GQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSH 478
            + C    + +GL  K  E  +        DI+   +  ++ + N  MF +  M I  +H
Sbjct: 431 KEFCT--VWVIGLVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMF-EVDMRIAATH 487

Query: 479 IRRKQI 484
           ++RKQ+
Sbjct: 488 VKRKQL 493


>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
          Length = 843

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 184/538 (34%), Positives = 276/538 (51%), Gaps = 60/538 (11%)

Query: 22  ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGY 81
           +  + PT A++     L+KF+      ES E  + RE+VL ++ ++ ++WV+ +   RG 
Sbjct: 22  VDGSSPTPAELSFQSTLQKFVDANVSLESSEGIKTRERVLVQMGRLHREWVRSVAIKRGL 81

Query: 82  SDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF---FI--------- 129
           S    + A   ++T GSYRLGVH PGADID + V PS+ SR+ DFF   ++         
Sbjct: 82  SPDAADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSFCSRD-DFFGSNYVPPGDAMDEG 140

Query: 130 -------------LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR 176
                        L   +     VT   PV +A VP++ F ++G++IDLL+A +S   + 
Sbjct: 141 DDEDGEQARDPDSLAERIRRQPHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIP 200

Query: 177 EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEH----FCTTLRCLKFWAKRRG 232
            + DI +  VL+ VD  T +SLNG RV + I  LV   E     F T +R ++ WAK RG
Sbjct: 201 RNFDIDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRG 260

Query: 233 VYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL 292
           +YSN  G+ GGVN  + VA V QLYPNA P+  + +FF V+  WRWPNPVML    +AEL
Sbjct: 261 LYSNKMGYWGGVNINMAVALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAEL 320

Query: 293 GFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN- 351
           G  VW+  +   +     P+ITPAYP MNS+ +VS  TL+++ ++F  G+ I +++  + 
Sbjct: 321 GLQVWNSHQA-ANMRQVAPMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDY 379

Query: 352 ------------KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL- 398
                          W  LFEP  FF +Y  YL + I      D  AW G+VESRLR+L 
Sbjct: 380 QRGAIDPADVESGGMWGELFEPSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLV 439

Query: 399 TLMIERDT-YGKLQCHPYPHEY--VDTSKPCAHC------AFFMGLQRKPGEVVQEGQQF 449
           + M+ R     K+Q  P   +    D +    H        +F+G   +  ++   G+Q 
Sbjct: 440 SDMLGRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGF--RVDKLRMRGEQL 497

Query: 450 DIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQR 506
           DI   +  F K  +  +    PGM+I       K++P   F   Y+     +LA+ +R
Sbjct: 498 DIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYEGG---KLAAMKR 552


>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
 gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
          Length = 309

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 138/285 (48%), Positives = 189/285 (66%), Gaps = 1/285 (0%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT PIS A  TE + +    L + L + G +ES+EE + RE VLGR+  + K +VK++
Sbjct: 2   WGVTPPISTAESTEREKEVTESLMEELRQQGTFESEEEAQTRELVLGRVSALVKKFVKKV 61

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
              RG S+     A   IFTFGSYRLGVHGP +DID LCV P +V RE DFF +   +L 
Sbjct: 62  GMARGLSEAAATAAGGKIFTFGSYRLGVHGPSSDIDTLCVVPKHVQRE-DFFEVFEPMLR 120

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
           E E  TE+  V +A+VP++     G+ +D L A ++   + EDL + D ++L ++DE  V
Sbjct: 121 EFEGATEVAGVPEAYVPIITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDERCV 180

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
           RSL G RVA++IL+LVPNV+ F  +LRC+K WA+RR +YSNV GF GGV WA++VAR+CQ
Sbjct: 181 RSLGGSRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVARICQ 240

Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
           LYPNA+   +VSRFF +   W WP PV+L  I+E  L   VW+P+
Sbjct: 241 LYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPK 285


>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
          Length = 494

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 264/475 (55%), Gaps = 8/475 (1%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           KP +  GPT A++Q + EL++F+ +     ++E+  KR++VL +I+ +  ++V+ + +  
Sbjct: 10  KPQTEEGPTGAELQASIELQRFIDKYDAPATEEQKTKRQEVLSKIKILINEFVRIIAKKT 69

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           G + + +E+  + +  +GSYRLGV   G+DID + V PS+V R  DFF   + ++     
Sbjct: 70  GNTAEGLENVESQLVPYGSYRLGVVSEGSDIDCIVVAPSFVKRS-DFFNTFYEMMINHPS 128

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           V EL  V +A+ P+M F +DG+ IDL +AS++   V ED D +D  +L++VDE +VRSLN
Sbjct: 129 VKELVKVENAYSPIMSFHYDGIEIDLSFASLAMTTVAEDTDFADDHILDNVDEESVRSLN 188

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           G RV D +L+LVPN + F   LR L+ WAK+R VY NV G+LGGVN A+L A +CQ YP 
Sbjct: 189 GRRVNDMLLQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVNLAILAAFICQRYPK 248

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
             P+ ++  FF     W WP P+ +          S WDP + ++D    MPIITPAYP 
Sbjct: 249 KSPAYIIVMFFNDLATWTWPEPIYINTPTTGNR--SNWDPTR-QQDHKDCMPIITPAYPT 305

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
           +NS ++ + S+   M  +F+ G  +      ++A W  + +   FF  +R +++V +VA 
Sbjct: 306 INSLHSATKSSRNRMTVEFKRGFKVASACLKSEASWERIIDSPKFFVRHRKFVEVLVVAT 365

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-VDTSKPCAHCA-FFMGLQR 437
                  +  +V+SR+R L + IE         + +P E+  +  +    C+ F++GL  
Sbjct: 366 EEKVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYRGNEFCSVFYIGLSY 425

Query: 438 KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
              +   + +  D+    +++   I       P  ++ +  +  K +P ++FP G
Sbjct: 426 HVPKDENQSRTLDLTSPAKKWVDDIRQKA--PPNADVILDVVDTKDLPSFLFPNG 478


>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
          Length = 483

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 162/444 (36%), Positives = 242/444 (54%), Gaps = 20/444 (4%)

Query: 42  LVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRL 101
           +V  GL  S E++ KR  V+ ++R+I   WVK +          ++  NA I  +GSY L
Sbjct: 1   MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGL 60

Query: 102 GVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGL 161
           GV+G  +DIDALC+GP + S  EDFF  L ++L    EV+EL  V DA VP+++FKFDG+
Sbjct: 61  GVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGI 120

Query: 162 SIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL 221
            +DL YA +  L +  ++D+ +   L D+DE + +SL+G R    IL+LVP++E F + L
Sbjct: 121 LVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLL 180

Query: 222 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
           RC+K WAKRRGVY N+ GFLGGV+ A+L A VC   PNA  S L++ FF  + +W+WP P
Sbjct: 181 RCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTP 240

Query: 282 VMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
           V+L             D   +       MPI  P       +  ++ ST   ++ +F  G
Sbjct: 241 VVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLG 289

Query: 342 NTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM 401
           + + ++       W  LFE Y +  +Y  + ++ + AAN +DL  W GWV+SR R L + 
Sbjct: 290 HNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIK 349

Query: 402 IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLS 461
           IE + YG   C P P EYV+T     +  F+ GLQ +   V       DI     +F  +
Sbjct: 350 IE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS------DIESVKIDFLKN 400

Query: 462 INMYMFWKPGMEICVSHIRRKQIP 485
           +N   F      I ++ ++  Q+P
Sbjct: 401 VNSGSFRGTVGRIQLTLVKASQLP 424


>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
 gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
 gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
          Length = 507

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 163/455 (35%), Positives = 245/455 (53%), Gaps = 20/455 (4%)

Query: 31  DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDAN 90
           D + +  L + +V  GL  S E++ KR  V+ ++R+I   WVK +          ++  N
Sbjct: 14  DDESSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATN 73

Query: 91  ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
           A I  +GSY LGV+G  +DIDALC+GP + S  EDFF  L ++L    EV+EL  V DA 
Sbjct: 74  ATILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAK 133

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           VP+++FKFDG+ +DL YA +  L +  ++D+ +   L D+DE + + L+G R    IL+L
Sbjct: 134 VPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQL 193

Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 270
           VP++E F + LRC+K WAKRRGVY N+ GFLGGV+ A+L A VC   PNA  S L++ FF
Sbjct: 194 VPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFF 253

Query: 271 RVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTST 330
             +  W+WP PV+L             D   +       MPI  P       +  ++ ST
Sbjct: 254 YTFAHWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNSTITRST 302

Query: 331 LRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 390
              ++ +F  G+ + ++       W  LFE Y +  +Y  + ++ + AAN +DL  W GW
Sbjct: 303 FYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGW 362

Query: 391 VESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFD 450
           V+SR R L + IE + YG   C P P EYV+T     +  F+ GLQ +   V       D
Sbjct: 363 VKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS------D 413

Query: 451 IRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
           I     +F  ++N   F      I ++ ++  Q+P
Sbjct: 414 IESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 448


>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
 gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
          Length = 343

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 205/336 (61%), Gaps = 20/336 (5%)

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  VL  +DE +VRS NG RV ++IL+LVPN E F TTL  +K WA+ RG+YSNV GFLG
Sbjct: 3   DDQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLG 62

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRK 301
           GVNWA+LVAR+CQ YPN++P+ L+SRFFR+Y MW WPNP+ML  +D    LGFS W+P+ 
Sbjct: 63  GVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKI 122

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
           N RD++H MPIITPAYP +NSSYNV  STL V+  +F  G     E+E  K  W+ LF  
Sbjct: 123 NVRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLFVA 182

Query: 362 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH--EY 419
             FF+  +++L+V+I A +A D   W GWVESRLR L L +E      ++ HP+    ++
Sbjct: 183 PAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE--ALSDIRIHPFARFFDF 240

Query: 420 VDT--------SKPCAHCAF-FMGLQR---KPGEVVQEGQQFDIRGSVEEFKLSINMYMF 467
           +DT        SK   H ++ F+GL+    K   V       D+   + +F    + +  
Sbjct: 241 IDTKDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWEG 300

Query: 468 WKPGMEICVSHIRRKQIPPYVF---PEGYKRTRHPR 500
              GM++ + H+ R QIP +V      G   ++H R
Sbjct: 301 RHGGMDMQIDHVTRSQIPEWVLESVASGADDSKHVR 336


>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
          Length = 283

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 133/272 (48%), Positives = 188/272 (69%), Gaps = 1/272 (0%)

Query: 3   SSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG 62
           +S+  ++ P PK YG+T PIS+A P EAD+   R+L + L   G++E + E ++R  VLG
Sbjct: 6   TSQVQTAQPTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLG 65

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++  + K W++E++  +     +++     IFTFGSYRLGVH  GADIDALCV P +V R
Sbjct: 66  KLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER 125

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
             DFF   +  L E EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + E+LD+ 
Sbjct: 126 T-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLR 184

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D  +L ++D   +RSLNGCRV D+IL LVPN+E+F  TLR +K WAKR  +YSN+ GFLG
Sbjct: 185 DDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLG 244

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYT 274
           GV+WA+LVAR CQLYPNAV + LV +FF V++
Sbjct: 245 GVSWAMLVARTCQLYPNAVAATLVHKFFLVFS 276


>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
          Length = 343

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/322 (45%), Positives = 199/322 (61%), Gaps = 17/322 (5%)

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D   L  +DE +VRS NG RV ++IL+LVPN E F TTL  +K WA+ RG+YSNV GFLG
Sbjct: 3   DDRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLG 62

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELGFSVWDPRK 301
           GVNWA+LVAR+CQ YPN++P+ L+SRFFR+Y MW WPNP+ML  +D    LGFS W+P+ 
Sbjct: 63  GVNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKI 122

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
           N RD++H MPIITPAYP +NSSYNV  STL ++  +F  G     E+E  K+ W+ LF  
Sbjct: 123 NVRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFIA 182

Query: 362 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY-- 419
            +FF+  +++L+V I A NA+D   W GWVESRLR L L +E     +L+ HP+   +  
Sbjct: 183 PVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLE--ALPELRIHPFARFFDF 240

Query: 420 --------VDTSKPCAHCAF-FMGLQR-KPGEVVQEG--QQFDIRGSVEEFKLSINMYMF 467
                     +SK   H ++ F+GL    P  V   G     D+   + +F    + +  
Sbjct: 241 GETKGATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWEA 300

Query: 468 WKPGMEICVSHIRRKQIPPYVF 489
              GM++ + H+ R QIP +V 
Sbjct: 301 RHGGMDMQIDHVTRSQIPEWVL 322


>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
          Length = 572

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 167/508 (32%), Positives = 276/508 (54%), Gaps = 32/508 (6%)

Query: 15  QYGVTK---PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           +Y V K   P+S  GP+ ADMQ N +L + L + G YE KE +++REQ L  I +I K W
Sbjct: 23  EYKVNKKAQPLSFDGPSVADMQLNDKLMETLKQLGAYEDKECNKRREQALENIEKIMKTW 82

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
             E+ + +  S     D +  +  FGSY LGVH   +DID LC+ P  V+R E FF  + 
Sbjct: 83  TCEICKTKNISLDF--DCSCRVAPFGSYCLGVHSHDSDIDLLCIIPEVVNRSE-FFSRVP 139

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS-DMSVLNDV 190
             LAE+E +T ++ + DA  PV+KF++ G  IDL    +    +  DL+I+ D  +L   
Sbjct: 140 AKLAEVEGITCIKSLADAFAPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIE 199

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +  LNG RV  ++L+ VPN+E+F   LR +K WA+RR +YS + GF GGV W ++ 
Sbjct: 200 DTKDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMA 259

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-------LGFSVWDPRKNR 303
           A+V QLYP   PS+L+ +FF +Y  W++ + +++   +E +            WDP + R
Sbjct: 260 AQVAQLYPKMCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTR-R 318

Query: 304 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 363
                 + +ITP YP  NS++NV+ S L V+ ++    N++ + +   ++ ++ LFEP +
Sbjct: 319 HFSRRPLTVITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAM 378

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH-------PYP 416
           FF+ Y  ++Q++++ +    + A+ G+VES++R+L   +     G    H       P P
Sbjct: 379 FFKQYGTFVQIEVLGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIP 437

Query: 417 HEYVDTSK----PCAHCAFFMGLQRKPGEVVQ---EGQQFDIRGSVEEFKLSINMYMFWK 469
            E++        P  +  F++GL+     V      GQ  D    V+EF L I++    +
Sbjct: 438 AEHLGGGDPEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFLLGIHITDPTQ 497

Query: 470 PGMEICVSHIRRKQIPPYVFPEGYKRTR 497
             + I V  ++R+ +P +V  E Y +++
Sbjct: 498 TSISIKV--VKRRALPEWVKKEYYSQSK 523


>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 533

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 218/392 (55%), Gaps = 32/392 (8%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           +PI+ + P++ D++ + +LE F+ +     +  +  +REQVLG+IR +   WV +     
Sbjct: 30  EPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEA 89

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           G S++  + A   I+T GSYRL +H P +DIDA+CV P + + E  FF  L   L     
Sbjct: 90  GMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSEL-FFTTLKERLIAHPL 148

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           V  +  +  A VP+++  FD + IDL  A +    V   LDI D                
Sbjct: 149 VANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDD---------------- 192

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
                DQ    VPN + F   +RC++ WAK RG+YSN  G+LGGVN+ ++VA  CQ+YPN
Sbjct: 193 -----DQ----VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPN 243

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A PS L+ RFF++   W WPN + L    +AELG  VW+ R N     H MPIITPAYP 
Sbjct: 244 AGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPV 300

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSA---LFEPYLFFESYRNYLQVDI 376
           MNSS NVS  TL VM  +F  G  +   +   K   SA   LFEP  FF  Y +YL VD+
Sbjct: 301 MNSSANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDM 360

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYG 408
           +A++ D+  AW GWVESRLR++T     ++ G
Sbjct: 361 MASSEDEHRAWVGWVESRLRKVTNRFRMESVG 392


>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
 gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
          Length = 328

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 199/320 (62%), Gaps = 11/320 (3%)

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQ 144
           + E    +I+TFGSYRLGV+   A+IDALCV P  + R+ D+F     +L +  EVTE +
Sbjct: 2   LAEKLGGMIYTFGSYRLGVNHKRANIDALCVAPRNIERQ-DYFGSFLELLKKQPEVTECR 60

Query: 145 PVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVA 204
            V +  VP +K   DG+ IDLL+A ++   + ++ D+ +  +L ++D   VRSLN CR  
Sbjct: 61  AVEEVLVPDVKMNLDGIKIDLLFARLALKEIPDNFDLCEDMLLKNLDPKLVRSLNRCRAT 120

Query: 205 DQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 264
           D+IL+LVPN+++F   LR  K WAK+ G+YSN  G+ GGV+WA+LVAR CQL PN V + 
Sbjct: 121 DEILRLVPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQL-PNVVAAT 179

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
            V +FF V++ W+W +PV L   D   LGF VWDPR N + + H MPIITPAYP      
Sbjct: 180 QVHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYP------ 233

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDL 384
               ST +VM+++F  G  I +E+ L KA W  LFE   FF  YR  + + + + N DDL
Sbjct: 234 ---HSTRKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYIIVLLVTSNNTDDL 290

Query: 385 LAWKGWVESRLRQLTLMIER 404
           L W   VES++R L   +ER
Sbjct: 291 LEWCELVESKIRYLIQNLER 310


>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
          Length = 367

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 155/368 (42%), Positives = 221/368 (60%), Gaps = 19/368 (5%)

Query: 49  ESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGA 108
           ES E  ++RE+VL ++  + ++WVK +   +G +   VE A   +FT GSYRLGVH PGA
Sbjct: 2   ESTEGIQRRERVLVKMGNLMREWVKGVAVKKGLNRDAVEGAGGELFTSGSYRLGVHEPGA 61

Query: 109 DIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYA 168
           DID + V P+  +RE DFF  L   +    +VT   PV +A VP++ F ++G++IDLL+A
Sbjct: 62  DIDTIAVAPNICTRE-DFFDSLAERIRRHPDVTNFVPVENAAVPILTFDWEGINIDLLFA 120

Query: 169 SISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEH----FCTTLRCL 224
            ++   V  D DI +  VL+ VD  T +SLNG RV + I  LV   +     F T +R +
Sbjct: 121 RLNASSVPRDFDIDNDLVLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFLTVVRLV 180

Query: 225 KFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML 284
           + WAK RG+YSN  G+ GGVN  + VA V QLYPNA P+ L+ +FF V+  WRWPNPVML
Sbjct: 181 RKWAKARGLYSNKMGYWGGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRWPNPVML 240

Query: 285 CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTI 344
               +AELG  VW+  +   +     P++TPAYP MNS+ +VS  TL+++ ++F  G+ +
Sbjct: 241 TKPHDAELGLPVWNSFQ-AANMRQVAPMVTPAYPAMNSTLSVSRQTLQILHEEFCRGHNV 299

Query: 345 CEEV-------ELNKAQ------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 391
            +++        L+K +      W  LFEP  FF  Y  YL + IV  +  D  AW G+V
Sbjct: 300 VDKLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPYYLSLCIVGPSQADAQAWAGFV 359

Query: 392 ESRLRQLT 399
           ESRLR+L 
Sbjct: 360 ESRLRKLV 367


>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
          Length = 507

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 224/381 (58%), Gaps = 11/381 (2%)

Query: 29  EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVED 88
           E +    +++ ++L   G +E + E  +RE+VLG +  +   ++ ++ +     +++  D
Sbjct: 7   ETERSNEKKVVEYLQTKGFFEDENESIQRERVLGMLSNLVNKFIMDIAK----RNEIPID 62

Query: 89  ANAL--IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPV 146
           + +L  IFTFGSYRLGVH  GADID LCV P++VSR E FF + ++ L     +TE+  V
Sbjct: 63  SKSLSKIFTFGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTVFYDELCSKSYITEISKV 121

Query: 147 LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
            +  VP++KFK   + IDL++A +    +  ++D+ +  +L  + E  + SLNG RV D+
Sbjct: 122 TNTFVPLIKFKIKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLNGNRVTDE 181

Query: 207 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLV 266
           IL  VPN+E F  TLR +K+WA++R VY +  G++GGV +AL VA+VCQ+YP+A     +
Sbjct: 182 ILAQVPNIETFHKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPSADAFKTI 241

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
            +FF V++ W WP PV++  + +      VW+P+ N   K   MP+ITP YP + S++N+
Sbjct: 242 EKFFEVFSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHNI 301

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQ----WSALFEPYLFFESYRNYLQVDIVAANAD 382
           +TSTL VM  +FQ G  I  E   NK +       L E   FF  ++ Y  + +   N+ 
Sbjct: 302 TTSTLFVMKREFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNSK 361

Query: 383 DLLAWKGWVESRLRQLTLMIE 403
           +   + G+ E+R+R     +E
Sbjct: 362 EFGRFMGFAETRVRMFAQKLE 382


>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
          Length = 554

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 146/408 (35%), Positives = 231/408 (56%), Gaps = 27/408 (6%)

Query: 21  PISMAGPT----EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           PI++  P     EAD +R+  L +FL   G   + EED+ REQV+ ++++I  DW K + 
Sbjct: 75  PIAVRVPPAFLFEADFRRSHSLVQFLENEGAVPTVEEDKTREQVIRKLKEIVMDWAKVVA 134

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +    + V    A + T+GSY LG HGP +DIDALCVGP   + +  FF  L  IL  
Sbjct: 135 YEQRVPPRRV---TATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHHFFVALRQILER 191

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
             EV+ +Q V +A VP+M+F F G+S+DL YA +  +   E ++ S    L  +D  + R
Sbjct: 192 RLEVSGMQTVENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWR 251

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
           SL+G RV +QI++LVPN + F   LR +K WA+RRG++ ++ GF  G++ A+L A +CQ 
Sbjct: 252 SLSGVRVNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQR 311

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
           YPNA  + L + FF ++  W W  PV L              P   +R   ++MPI+ P 
Sbjct: 312 YPNATANGLFTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSDGYYMPIVMPC 360

Query: 317 YP---CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
            P   CM+   N++  T + + ++   G  + +++  +  +W+ LF P+ +   Y+ +L+
Sbjct: 361 TPPELCMS---NMTKCTFKKIREELMRGYALTKDLWRHDFEWTWLFAPFPYATRYQQFLR 417

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
           + + +  +++L  W GWV+SR RQL L +ER+    L+C PY  E VD
Sbjct: 418 IALCSPTSEELRDWTGWVKSRFRQLILKLERN---GLECDPYSSEEVD 462


>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
          Length = 604

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 171/541 (31%), Positives = 279/541 (51%), Gaps = 74/541 (13%)

Query: 32  MQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR-GYSDQMVEDAN 90
           M+  + LE  L   G+ ++ E  ++R  VL ++ ++ + WVK+ ++    + ++     +
Sbjct: 1   MEDTKALEAALEPEGVIDTDENMQQRCLVLSKLNELVQAWVKKASKEEYNFEEEAANQVD 60

Query: 91  ALIFTFGSYRLGVHG----------------PGADIDALCVGPSYVSREEDFFFILHNIL 134
           A +FTFGSYRLGV                     DID L   P ++ RE  FF   + +L
Sbjct: 61  ARLFTFGSYRLGVQSRYDMSSIQLFQMQFSRDAGDIDTLLCFPHHIKRES-FFGTFYQLL 119

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
            E   VT+L     A VPV+K   DG+ +DLL+AS+    +   L + D+ +L  + E  
Sbjct: 120 KETPGVTDLHAAEGAFVPVIKLAMDGVELDLLFASLPVDRLEPTLSLQDVDLLKKIHEDE 179

Query: 195 V-RSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKR-------------RGVYSNVTG 239
           + RS+NGCRVAD +L+++P N++ F T LR +K WAK              RGVYSNV G
Sbjct: 180 IMRSINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQTVRTSGRGVYSNVHG 239

Query: 240 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW-----------------RWPN-P 281
           + GG++  +LV R+CQLYPNA  S ++ +FFRVY+ W                  W N P
Sbjct: 240 YFGGIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSP 299

Query: 282 VMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
           + +  +D+  LG   WDPR N RD+   MPIITP YP  N+++NV+ STL  ++ +F  G
Sbjct: 300 IKIKDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRG 359

Query: 342 NTICEEV--ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLT 399
           + +C+++    +   WSA++EP  FF+ Y+ +++V   AA   D   ++G VES +R L 
Sbjct: 360 HRVCQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVRHLV 419

Query: 400 LMIERDTYGKLQCHPYPHEYVD-----------TSKPCAHCAFFMGLQ---RKPGEVVQE 445
           L ++  T        YP  Y +           T+ P    A+++ L+   ++ G +   
Sbjct: 420 LNLQY-TDNVAYAMAYPKAYHEDPVADKDGTEATTGPW-RTAWYLALEFGIKQEGRIEPA 477

Query: 446 GQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPR 500
             + D++G +  F       ++ M  + +  M + V  +++ ++P Y++P G    R  R
Sbjct: 478 PSKLDLQGPLVAFYGRLRDRTVTMSRYDETTMNVDVQAMKQSKLPGYLYPGGVNPHRKVR 537

Query: 501 L 501
           L
Sbjct: 538 L 538


>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
 gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
          Length = 700

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/452 (33%), Positives = 244/452 (53%), Gaps = 64/452 (14%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR---------------- 57
           +Q+G+T P+S A PT +++  N  L   L     +E   E EKR                
Sbjct: 7   RQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRFVWLFKNAFACLGNTN 66

Query: 58  -------EQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADI 110
                  +Q L  ++++  +++K +++ +G S   ++ +                 G+DI
Sbjct: 67  SSGLFFRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASG----------------GSDI 110

Query: 111 DALCVGPSYVSREEDFFFILHNIL---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLY 167
           D L V P +V RE DFF     +L   A  + + ++ PV DA VP++K +  G+SIDL++
Sbjct: 111 DTLVVAPKHVMRE-DFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIF 169

Query: 168 ASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFW 227
           A +    V  +LD+ +  +L  +DE  +R +NG RV D+IL+LVP  + F   LR +K W
Sbjct: 170 ARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLW 229

Query: 228 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI 287
           A+RR +YSN+ GF GGV WA+LVARVCQLYP A  S++V +FFR+   W WP PV+L  I
Sbjct: 230 AQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHI 289

Query: 288 DEAELGFSVWDPRKNRR-------------------DKTHHMPIITPAYPCMNSSYNVST 328
           ++  L   VW+P+   +                   D+ H MPIITPAYP M +++NVS 
Sbjct: 290 EDGPLHMKVWNPKVGSQLCFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCATHNVSM 349

Query: 329 STLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANADDLLAW 387
           ST  V++ + + G  + +++ + + +WS LF  + FF + Y+ YL ++  + + +    W
Sbjct: 350 STKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIW 409

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 410 SGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 440


>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
           vaginalis G3]
 gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
           vaginalis G3]
          Length = 508

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 266/484 (54%), Gaps = 13/484 (2%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           P    + KP+S A PT  D++ +R+L +FL  AG     E  + R+ V   + +I   ++
Sbjct: 12  PAWIPLYKPVSEAEPTPIDIEASRKLVEFLDSAGAIADAEAMKHRQAVFETVSKIVDQFI 71

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           +++   +       E     +F  GSY+LGV  P +DID + + P +V +EE FF I + 
Sbjct: 72  EKVRVNKKMEPPEGEVYKGKLFYSGSYKLGVCSPKSDIDCVILAPQFVQKEE-FFSIFYE 130

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
           +LA   +V  L  V +A+VP++K  +D +  D+ +A++    + +D+D+S  SVL ++ +
Sbjct: 131 LLAADTKVKGLIKVEEAYVPIIKLTYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSK 190

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            +VR+LN  RV + ++KLVPN+++F T L+ +++WA +RG+Y NV G+ GGVN A+L A 
Sbjct: 191 LSVRALNSLRVNNMVIKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAF 250

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           VCQ YP A P+ML   FF   + W WP P+ +   +  EL    WDP     D    MPI
Sbjct: 251 VCQRYPTASPAMLALYFFSEISQWTWPTPIYINRPNYGEL--LSWDP-TTESDHNDVMPI 307

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           ITPAYP  NS  + +TS+   ++ +      I   +      WSA+ E + FFESY+NY+
Sbjct: 308 ITPAYPSTNSQRSATTSSRNRIIQEMVKALQIMPNIITGDLPWSAVCEDHEFFESYKNYI 367

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP-YPHEYVDTSKPCAHCAF 431
           ++DI A    D   WKG V S++++L   +E     +++C P +P  +   +      + 
Sbjct: 368 EIDIRAEGLADYNWWKGTVISKVKRLITSLE--AIERVKCAPIFPSSFDRENNNKYQGSI 425

Query: 432 FMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSH---IRRKQIPPYV 488
           F+GL+ +  +   EG++ +   +++++   I  Y      +   + +   I RK+IP + 
Sbjct: 426 FIGLETEKTK-DDEGKKVNPSAAIKKYLEEI--YKLTNRPLSTKIENPQVINRKKIPDFC 482

Query: 489 FPEG 492
           FP G
Sbjct: 483 FPNG 486


>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
 gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
          Length = 599

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/453 (33%), Positives = 244/453 (53%), Gaps = 65/453 (14%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKR---------------- 57
           +Q+G+T P+S A PT +++  N  L   L     +E   E EKR                
Sbjct: 7   RQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRFVWLIKMLLTCLGNTN 66

Query: 58  -------EQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADI 110
                  +Q L  ++++  +++K +++ +G S   ++ +                 G+DI
Sbjct: 67  SSGLVFRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASG----------------GSDI 110

Query: 111 DALCVGPSYVSREEDFFFILHNIL---AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLY 167
           D L V P +V RE DFF     IL   A  + + ++ PV DA VP++K +  G+SIDL++
Sbjct: 111 DTLVVAPKHVMRE-DFFAHFPAILEKHAPKDAIEKMTPVPDAFVPIIKIEIFGISIDLIF 169

Query: 168 ASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFW 227
           A +    V  +LD+ +  +L  +DE  +R +NG RV D+IL+LVP  + F   LR +K W
Sbjct: 170 ARLIVSSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLW 229

Query: 228 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI 287
           A+RR +YSN+ GF GGV WA+LVARVCQLYP A  S++V +FFR+   W WP PV+L  I
Sbjct: 230 AQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHI 289

Query: 288 DEAELGFSVWDPRKNRR--------------------DKTHHMPIITPAYPCMNSSYNVS 327
           ++  L   VW+P+   +                    D+ H MPIITPAYP M +++NVS
Sbjct: 290 EDGPLHMKVWNPKVGSQLCFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMCATHNVS 349

Query: 328 TSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES-YRNYLQVDIVAANADDLLA 386
            ST  V++ + + G  + +++ + + +WS LF  + FF + Y+ YL ++  + + +    
Sbjct: 350 MSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKEAQAI 409

Query: 387 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           W G VES+LR L   ++R +  ++  HP+P  +
Sbjct: 410 WSGLVESKLRHLVGALDRKSSIEI-AHPFPKGF 441


>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
          Length = 482

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 160/444 (36%), Positives = 239/444 (53%), Gaps = 21/444 (4%)

Query: 42  LVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRL 101
           +V  GL  S E++ KR  V+ ++R+I   WVK +          ++  NA I  +GSY L
Sbjct: 1   MVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGL 60

Query: 102 GVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGL 161
           GV+G  +DIDALC+GP + S   DFF  L ++L    EV+EL  V DA VP+++FKFDG+
Sbjct: 61  GVYGSESDIDALCIGPFFAS-IADFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGI 119

Query: 162 SIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL 221
            +DL YA +  L +  ++D+ +   L D+DE + + L+G R    IL+LVP++E F + L
Sbjct: 120 LVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLL 179

Query: 222 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
           RC+K WAKRRGVY N+ GFLGGV+ A+L A VC   PNA  S L++ FF  +  W+WP P
Sbjct: 180 RCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTP 239

Query: 282 VMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
           V+L             D   +       MPI  P       +  ++ ST   ++ +F  G
Sbjct: 240 VVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLG 288

Query: 342 NTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM 401
           + + ++       W  LFE Y +  +Y  + ++ + AAN +DL  W GWV+SR R L + 
Sbjct: 289 HNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIK 348

Query: 402 IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLS 461
           IE + YG   C P P EYV+T     +  F+ GLQ +   V       DI     +F  +
Sbjct: 349 IE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS------DIESVKIDFLKN 399

Query: 462 INMYMFWKPGMEICVSHIRRKQIP 485
           +N   F      I ++ ++  Q+P
Sbjct: 400 VNSGSFRGTVGRIQLTLVKASQLP 423


>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
           binding, putative [Ichthyophthirius multifiliis]
          Length = 512

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 145/428 (33%), Positives = 247/428 (57%), Gaps = 29/428 (6%)

Query: 44  EAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGV 103
           E    E++EE +++++ + ++R+I  +W+ ++        Q+    N  +  FGSY+L V
Sbjct: 50  EYNYSETEEEIKQKDKKVQKLREIILNWISQVAE----EKQIDFKYNGDLLIFGSYKLKV 105

Query: 104 HGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSI 163
           +   +DIDA+C  PS+V  ++ FF  L +IL++ +EV ++  +    VP++K ++ G+  
Sbjct: 106 NQKNSDIDAVCFVPSFVECKKHFFGDLFHILSQKKEVEDIFSIQHTSVPLIKMRYFGIPF 165

Query: 164 DLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRC 223
           D+ ++  S+   + DLDI  + +L  +DE ++R+LNG RVA+   + + N + F   L+C
Sbjct: 166 DISFSKQSQSQFKSDLDIKSIQILQGMDEKSIRALNGYRVAEWFNQNIKNKDTFKKALKC 225

Query: 224 LKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PV 282
           +K WA+ R +YSN+ G+L G+ W++LVA++CQLYPN     ++ RFF +Y+ W+W +  V
Sbjct: 226 IKLWAQNRCIYSNILGYLNGIAWSILVAKICQLYPNYFVYGIIERFFFLYSRWKWHDMAV 285

Query: 283 MLCAIDEAELGFSV----WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQF 338
            +  I E      +    W P         +M IITP +PC+N +YNV+ STLRV+ +QF
Sbjct: 286 QIEYIQEDIYNQMICGNQWVP---ENKGISNMMIITPCFPCINCAYNVTESTLRVIQEQF 342

Query: 339 QYGNTICEEVELNKAQWSA--LFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 396
           QYG  I +E++ N++ +    LF+P+ FF+ Y  +LQ+ I+A N ++   WKG VE  LR
Sbjct: 343 QYGYRILDEIQKNQSHYDYQDLFKPFEFFKRYNAFLQIRILAKNKNEYFQWKGHVEINLR 402

Query: 397 QLTLMIERDTYGK-LQCHPYPHEYVDTSKP------CAHCAFFMGLQRKPGEVVQEGQQF 449
           +LT +IE     K +  HP+  +++D             C +F G++ K         Q 
Sbjct: 403 KLTKIIENGKLSKIILIHPFS-KFIDLCLKEQLGDYSLGCVYFYGIKVKDN-------QN 454

Query: 450 DIRGSVEE 457
           DI+ S EE
Sbjct: 455 DIQISFEE 462


>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
          Length = 279

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 132/268 (49%), Positives = 187/268 (69%), Gaps = 1/268 (0%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           + PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + 
Sbjct: 13  TQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLV 72

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF 
Sbjct: 73  KEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFT 131

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 132 SFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 191

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKW 279


>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
 gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
 gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
 gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
 gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
          Length = 285

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 132/268 (49%), Positives = 187/268 (69%), Gaps = 1/268 (0%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           + PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + 
Sbjct: 13  TQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLV 72

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF 
Sbjct: 73  KEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFT 131

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 132 SFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 191

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKW 279


>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
           [Nasonia vitripennis]
          Length = 383

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 221/381 (58%), Gaps = 8/381 (2%)

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           H +L   +EV +L+ + +A V V+K  FDG+ ID+L+A +    + + +D +D  +L  +
Sbjct: 4   HELLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYL 63

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHF-CTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           D+  VRSLNGCRV  +IL+ V N+E+F  TTL+ +K  AK  G+YSNV G+LG V+WA+L
Sbjct: 64  DQKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAIL 123

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK--T 307
           VAR CQLYPNA P+ L+ +FF ++++W WP PV+L ++ +  LG  VWDPR N  D+   
Sbjct: 124 VARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPY 183

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS++NV+ ST  +M +  +    I +++ + KA W  LFEP  FF+ 
Sbjct: 184 HLMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPSNFFDE 243

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSK 424
            ++++ +   +      + W G++ES++R L    +R+   T+  +    +P   +   +
Sbjct: 244 XKHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNPNITFAHINPKSFPP--LKPEE 301

Query: 425 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQI 484
               C + +GL  +  E +      DI+  ++  +  +     +K GM     ++RRK +
Sbjct: 302 DEHGCMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYVRRKNL 361

Query: 485 PPYVFPEGYKRTRHPRLASQQ 505
             Y+     KR R    ++QQ
Sbjct: 362 SNYIAANQIKRGRKTSSSTQQ 382


>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
 gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
          Length = 506

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/460 (33%), Positives = 251/460 (54%), Gaps = 28/460 (6%)

Query: 28  TEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVE 87
           TE +   + ++ ++L   G +E + E  +RE+VLG++  +   ++ ++ +     +Q+  
Sbjct: 6   TETERTNDEKVVEYLHSKGFFEDESESIQRERVLGKLSNLVNKFIMDIAK----RNQIPI 61

Query: 88  DANAL--IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQP 145
           D  +L  IFTFGSYRLGVH  GADID LCV P++VSR E FF   ++ L   + +TE+  
Sbjct: 62  DKKSLSKIFTFGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTTFYDELCSKDYITEISK 120

Query: 146 VLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVAD 205
           V +  VP++KFK   + IDL++A +    +  ++D+ +  +L  + E  + SLNG RV D
Sbjct: 121 VTNTFVPLIKFKIKTIPIDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLNGNRVTD 180

Query: 206 QILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSML 265
           +IL  VPN+  F  TLR +K+WA++R VY +  G++GGV +AL VA+VCQLYP A     
Sbjct: 181 EILAQVPNISTFHKTLRFIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPGADAFET 240

Query: 266 VSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYN 325
           + +FF V++ W WP PV++  + +      VW+P+ N + K   MP+ITP YP + S++N
Sbjct: 241 IEKFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHN 300

Query: 326 VSTSTLRVMMDQFQYGNTICEEVELNK---AQWSALFEPYLFFESYRNYLQVDIVAANAD 382
           ++ STL V   +F  G  I  E    K        L E   FF  ++ Y  + +   N  
Sbjct: 301 ITNSTLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPK 360

Query: 383 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV---DTSK--------PC----- 426
           +   + G+ E+R+R     +E +       + +P +Y+    TSK         C     
Sbjct: 361 EFSRFMGFAETRVRMFAQKLE-NIENIEYAYTFPKKYILEDVTSKNVPLLKELKCGDDSY 419

Query: 427 AHCAFFMGLQRKPGEV-VQEGQQFDIRGSVEEFKLSINMY 465
           A  AFF+G+     ++ +   ++ +++  V EFK S+  Y
Sbjct: 420 AFGAFFIGIDFSTVKLPLNASKKMNLKKPVLEFKSSLETY 459


>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
 gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 293

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 131/268 (48%), Positives = 187/268 (69%), Gaps = 1/268 (0%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           + PP + YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + 
Sbjct: 13  TQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLV 72

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF 
Sbjct: 73  KEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFT 131

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 132 SFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 191

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+
Sbjct: 192 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAM 251

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 252 LVARTCQLYPNAIASTLVHKFFLVFSKW 279


>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
          Length = 613

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 250/444 (56%), Gaps = 27/444 (6%)

Query: 15  QYGVTK---PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           +Y V K   P+S  GP+ ADM+ N +L + L + G YE KE +++REQ L  I +I K W
Sbjct: 23  EYKVNKKAQPLSFDGPSVADMKLNDKLMETLKQLGAYEDKECNQRREQALENIEKIMKTW 82

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
             E+ + +  S     D +  +  FGSY LGVH   +DID LC+ P  V+R E FF  + 
Sbjct: 83  TCEICKTKNISLDF--DCSCRVVPFGSYCLGVHSHDSDIDLLCIIPEVVNRSE-FFSRVP 139

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS-DMSVLNDV 190
             LAE+E +T ++ + DA VPV+KF++ G  IDL    +    +  DL+I+ D  +L   
Sbjct: 140 AKLAEVEGITCIKSLADAFVPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIE 199

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +  LNG RV  ++L+ VPN+E+F   LR +K WA+RR +YSN+ GF GGV W ++ 
Sbjct: 200 DTKDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMA 259

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-------LGFSVWDPRKNR 303
           A+V QLYP   PS+L+ +FF +Y  W++ + +++   +E +            WDP ++ 
Sbjct: 260 AQVAQLYPKMCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHH 319

Query: 304 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 363
             +   + +ITP YP  NS++N++ S L V+ ++    N++ + +   ++ ++ LFEP +
Sbjct: 320 FSR-RPLTVITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAM 378

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCH-------PYP 416
           FF+ Y  ++Q++++ +    + A+ G+VES++R+L   +     G    H       P P
Sbjct: 379 FFKQYGTFVQIEVLGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIP 437

Query: 417 HEYVDTSK----PCAHCAFFMGLQ 436
            E++        P  +  F++GL+
Sbjct: 438 AEHLGGGDPEDGPWQNIFFYLGLK 461


>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
          Length = 840

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/503 (33%), Positives = 252/503 (50%), Gaps = 44/503 (8%)

Query: 20  KPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLR 79
           +P+S   P+   +   R+LE  L + G+ ES E  E+R +VL  +    KDW+ + +   
Sbjct: 4   EPLSTEHPSLEQLMSTRKLETCLKKEGIMESTEGYEQRNRVLANLNAFVKDWLYKYSLEH 63

Query: 80  GYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE 139
           G S +  +   A IFTFGS+RLGVH    DIDAL   P  V+R   FF   ++ LA+ ++
Sbjct: 64  GKSPEAAQLIRAKIFTFGSFRLGVHSKNGDIDALICFPQSVTRAA-FFSSFYDALAQRDD 122

Query: 140 VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
           V +L     A VP +K  F G+ +DLL A +    +   LD+SD  +L ++ E  VRS+N
Sbjct: 123 VEDLHSAESAAVPAIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPETCVRSIN 182

Query: 200 GCRVADQILKLVPNV-EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           G RV D+IL+L P   E F   LR +K WAKRRG+Y N   ++GGV+ A+LVA++CQL+P
Sbjct: 183 GRRVTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAKICQLFP 242

Query: 259 NAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS---VWDPRKNRRDKTHHMPIITP 315
            A  S LV +FF  Y  W W  PV L  ++  +LG +    W P  N  D +  M I+TP
Sbjct: 243 YATASTLVEKFFWHYKRWDWAIPVELQHVE--DLGITHIPHWSPINNYHDMS-VMKILTP 299

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
            YP  N+SY V+ STL  +  +     ++ +++   KA W  L++   FF  Y +Y+ V 
Sbjct: 300 VYPSQNASYTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQIPFFGVYSHYICVQ 359

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMI--------------------ERD--TYGKLQCH 413
            +  +  D   ++G VES +R L   +                    E+D  T      H
Sbjct: 360 ALTNSEQDRTLYEGLVESTVRNLVTSLEFHPAVTYAIPIPKAFRRSPEKDPSTLEDEDTH 419

Query: 414 PYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINM----YMFWK 469
             P EY      C    +F+GL   P    +  +Q DI   + +F+  +         + 
Sbjct: 420 ERPPEY------CWRTLWFIGLVFDP----KATEQLDILTVMSDFERRVRFKESRMTRYD 469

Query: 470 PGMEICVSHIRRKQIPPYVFPEG 492
           P M   V  + R +IP ++  E 
Sbjct: 470 PSMRYTVDPMARDEIPTWLHAEA 492


>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
 gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
          Length = 505

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/418 (36%), Positives = 232/418 (55%), Gaps = 27/418 (6%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S PP P   GVT P+S   PT AD +   EL  F+      ES     KR +VL  I ++
Sbjct: 30  SLPPWP---GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERM 86

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
              W+ +++     + ++   + A + TFGS+RLGV  P +DID L + P+ +SR++ F 
Sbjct: 87  VNKWIYDVS-----AGEI--QSKARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFT 139

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
             +  +L     VTE  PV  AHVP++K K+ G+ +D+L A +   V+  D+D     ++
Sbjct: 140 DFVETMLNRSPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELI 199

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
            DV++  ++S+NG RVAD++L LV + + F    R +K+WA++R +YSN  G++GGV+WA
Sbjct: 200 YDVEKRCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWA 259

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           ++V RVCQLYPN     +V RFF VY  W+W            + G S    R+   D+ 
Sbjct: 260 VMVGRVCQLYPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNVPLRRYTSDRH 311

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ---------WSAL 358
           H MP+ITP +P  N++YNV  S  RV++ + + G  I E + +NK+          W+ L
Sbjct: 312 HVMPVITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADL 371

Query: 359 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 416
             P+ FF+ YR +L ++I A      L +KG VESR+R L   +E     K+   P+P
Sbjct: 372 CAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHP 429


>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
           magnipapillata]
          Length = 351

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/355 (40%), Positives = 221/355 (62%), Gaps = 15/355 (4%)

Query: 163 IDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLR 222
           IDLL+A ++   + EDLD+ D ++L ++D   VRSLNGCRV D+IL LVPN+ +F  TLR
Sbjct: 1   IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60

Query: 223 CLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPV 282
            +K WAK + VYSNV GFLGGV+WA+LVAR+CQLYPNA+ + LV +FF +Y+ W WP PV
Sbjct: 61  AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120

Query: 283 MLCAI-DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
           +L  +  E +L F +WDPR N  D+ H MPIITPAYP  NS++NVS S+  VM D F+ G
Sbjct: 121 LLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRG 180

Query: 342 NTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM 401
             + EE+    + W ALF P  FF+ Y++Y+ +   + +++  L W+G VES++R L + 
Sbjct: 181 FQVMEEIYSKTSTWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILIVN 240

Query: 402 IERDTYGKL-QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKL 460
           +ER+ + KL   +P  ++ +  S+      +F+GL+ +  E  +   + DI   ++ F  
Sbjct: 241 LERNQFVKLAHVNPKSYDPILKSESGTVSRWFIGLEFQKPEGTK-NVKVDITAEIQYFTS 299

Query: 461 SIN----MYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENG 511
           +++        ++ GM     H+++KQ+  Y+ P    R +       ++SS NG
Sbjct: 300 TVHKQACQIAIFREGMRTEARHVKKKQLSNYL-PNTVLRLK-------KKSSLNG 346


>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
 gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
          Length = 436

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/403 (36%), Positives = 226/403 (56%), Gaps = 27/403 (6%)

Query: 10  PPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAK 69
           PP P   GVT P+S   PT AD +   EL  F+      ES     KR +VL  I ++  
Sbjct: 32  PPWP---GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVN 88

Query: 70  DWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI 129
            W+ +++     + ++   + A + TFGS+RLGV  P +DID L + P+ +SR++ F   
Sbjct: 89  KWIYDVS-----AGEI--QSKARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDF 141

Query: 130 LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLND 189
           +  +L     VTE  PV  AHVP++K K+ G+ +D+L A +   V+  D+D     ++ D
Sbjct: 142 VETMLNRSPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYD 201

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           V++  ++S+NG RVAD++L LV + + F    R +K+WA++R +YSN  G++GGV+WA++
Sbjct: 202 VEKRCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVM 261

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           V RVCQLYPN     +V RFF VY  W+W            + G S    R+   D+ H 
Sbjct: 262 VGRVCQLYPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHV 313

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ---------WSALFE 360
           MP+ITP +P  N++YNV  S  RV++ + + G  I E + +NK+          W+ L  
Sbjct: 314 MPVITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCA 373

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           P+ FF+ YR +L ++I A      L +KG VESR+R L   +E
Sbjct: 374 PFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLE 416


>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
 gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
          Length = 554

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/393 (37%), Positives = 224/393 (56%), Gaps = 35/393 (8%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K  G+T  IS+A P + D  +  EL+K L    ++E + +   R ++L ++  + K WV+
Sbjct: 177 KLMGMTSAISLAEPKKEDHTKTVELQKALEPYNVFEDESKLNHRMEILSKLNTLVKQWVR 236

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF--FFILH 131
            ++  +   + + E     I+TFGSYRL V+  G +IDALCV P  + R++ F  FF L 
Sbjct: 237 NVSISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQDYFGSFFEL- 295

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
                +++  E + V +A VPV+K KFDG+ IDLL+A ++   + +  D+ +  +L ++D
Sbjct: 296 -----LKKQPEYRAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDKFDLREDMLLKNLD 350

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              VRSLNGCR  D+IL+ VPN+++F   L        + G+YSN  G+ GGV+WA+LVA
Sbjct: 351 PKLVRSLNGCRATDEILRPVPNIDNFRLAL--------QHGIYSNSLGYFGGVSWAMLVA 402

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           R CQL  N V +  V + F V++ W+              LGF +WDPR N + + H M 
Sbjct: 403 RTCQLL-NVVAATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQGQFHLMS 451

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
           IITPAYP  NS+++VS ST +VM+++F  G  I +E+ L+KA W  L        SY   
Sbjct: 452 IITPAYPQQNSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKAGWDKLIATL----SYSTL 507

Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
               + + N DD L W G VES++R L   +ER
Sbjct: 508 ----VTSNNTDDHLEWCGLVESKIRYLIQNLER 536


>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
          Length = 540

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 189/313 (60%), Gaps = 21/313 (6%)

Query: 200 GCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
           GCRV D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR CQLYPN
Sbjct: 4   GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ H MPIITPAYP 
Sbjct: 64  AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
            NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y++Y+ +   A 
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAP 183

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMG 434
                L W G VES++R L   +E++ +  L     Q  P P E  D  +      + +G
Sbjct: 184 TEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FRTMWVIG 241

Query: 435 LQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IP 485
           L  K  E   E    D+   ++ F     + +IN  MF +  M+I   H++RKQ    +P
Sbjct: 242 LVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLP 299

Query: 486 PYVFPEGYKRTRH 498
            +V     KR +H
Sbjct: 300 SHVL---QKRKKH 309


>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
           binding, putative [Ichthyophthirius multifiliis]
          Length = 502

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 156/451 (34%), Positives = 268/451 (59%), Gaps = 36/451 (7%)

Query: 55  EKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANA--LIFTFGSYRLGVHGPGADIDA 112
           +K+++   ++R I K+W++++      +++ +E+ +   L+F FGSY+L V+  G+DIDA
Sbjct: 60  QKKDEAAKQLRIIIKNWIQQIN-----AEKQIENNHGGDLLF-FGSYKLKVNSRGSDIDA 113

Query: 113 LCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISR 172
           +C+ P YV RE++FF  L +IL++ +E+TEL P+ +A VP++K +F G+  DL +A    
Sbjct: 114 VCLCPFYVEREKNFFGDLVHILSQKKEITELFPIQEASVPIIKMQFQGILFDLSFARAPT 173

Query: 173 LVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL--VPNVEHFCTTLRCLKFWAKR 230
               + +D++   +L  +DE + +S NG RVA+ + K   + N E+F + L+C+K WA+ 
Sbjct: 174 QFQSDKIDLTSNQMLLGMDERSCKSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQN 233

Query: 231 RGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVMLCAIDE 289
           RG+YSN+ G+L G+ W +LV+++CQL+PN   + L+ RFF +Y+ WRW + PV +  I +
Sbjct: 234 RGIYSNIIGYLSGIGWTILVSKICQLFPNYSLNQLLERFFFLYSRWRWQDFPVQVEYIVD 293

Query: 290 ----AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTI 344
               ++L    W P     +    M IITP +PCMN ++NVS++TLR++ +Q  +G  TI
Sbjct: 294 DVANSKLSADQWRP-----EYKSSMMIITPCFPCMNCAHNVSSTTLRIIQEQLWHGYETI 348

Query: 345 CEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
           C +++     +S LF+ + FF+ Y+++L++ I+A N +D   WKG VES LR+LT + E 
Sbjct: 349 C-KIQNGSKNYSDLFKSFKFFKKYKHFLEIKILATNKNDYTVWKGHVESGLRKLTRLFES 407

Query: 405 DTY-GKLQCHPYP---HEYVDTS-----KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSV 455
             Y   L+ HPYP     ++D +     K    C ++ GL     E     +  +++ + 
Sbjct: 408 PQYMNLLEVHPYPSYIENFLDDTQSQKNKYKFQCKYYYGLMCLQSE---NNESINLKEAC 464

Query: 456 EEFKLSINMYMFWK--PGMEICVSHIRRKQI 484
             F   + MY   K    M I  SH+ R ++
Sbjct: 465 VYFVEQLEMYPMNKVLESMNIQCSHLLRSEL 495


>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
          Length = 275

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 129/266 (48%), Positives = 184/266 (69%), Gaps = 1/266 (0%)

Query: 9   SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
           + PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + 
Sbjct: 10  TQPPQKHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLV 69

Query: 69  KDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF 128
           K+W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF 
Sbjct: 70  KEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFT 128

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
             ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L 
Sbjct: 129 SFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLK 188

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
           ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K WA    +YSN+ GFLGGV+WA+
Sbjct: 189 NLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAM 248

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYT 274
           LVAR CQLYPNA+ S LV +FF V++
Sbjct: 249 LVARTCQLYPNAIASTLVHKFFLVFS 274


>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 546

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/471 (32%), Positives = 243/471 (51%), Gaps = 26/471 (5%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           Q+ +   +  A     D  R++ L  F+   G+  S EE+ KR+ V+  + +I   W K 
Sbjct: 62  QHLIICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAK- 120

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
             R+     +   +  A + TFGSY LG +GP +DIDA+CVGP   S +  FF +L  +L
Sbjct: 121 --RVAYDQREQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQML 178

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
            E  EV++L  + +A VP+M+FKF+G+ +D  Y  +  +   E +   D  +L  V+EP+
Sbjct: 179 EERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPS 238

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
            R L+G RV  QI++L+PN++ F   LRCLK WA++RG++ ++ GF  G++ A+L A VC
Sbjct: 239 WRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVC 298

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
            ++P+A  S L + FF +++ W WP PV L  +D+         P   R      MPI+ 
Sbjct: 299 IMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVM 347

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           P  P    + +++ ST   + ++ Q G  + +        W+ LF P+ +   Y+++L++
Sbjct: 348 PCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRI 407

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMG 434
            + A  A++L  W GWV+SR R L L +E  + G + C P P E  D S    +  FF G
Sbjct: 408 VLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWG 464

Query: 435 LQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
           L  +           E   +    DI G  +     I M + W   +  CV
Sbjct: 465 LMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 515


>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
          Length = 459

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 203/368 (55%), Gaps = 47/368 (12%)

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV WA+L
Sbjct: 1   LDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAML 60

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           VAR CQLYPNA  + LV +FF V++ W+WPNPV+L   D   L F VWDPR N  D+ H 
Sbjct: 61  VARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHP 120

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP  NS++NVS ST +V++ +F  G  I +E+ L +  W  LFE   FF  YR
Sbjct: 121 MPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYR 180

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVD------- 421
           +++ + + +  ADD L W G VES++R L   +ER+ +  L   +P   E+         
Sbjct: 181 HFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIALAHVNPKCFEFKKGQSANNS 240

Query: 422 --------------------TSKP-CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKL 460
                               TS P C+   +F+GL+ +  E +      D+  S++ F  
Sbjct: 241 QNNSGNEDDLKQSQGNQSAVTSAPFCS--MWFIGLEFERSENL----NVDLTESIQNFTE 294

Query: 461 SINMY----MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT 516
            + M+       K GM I   H++RKQ+  Y+  +  KR R        +S E+ N +  
Sbjct: 295 HVMMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRER--------KSMESHNNFNN 346

Query: 517 GSGLKRKK 524
                RK+
Sbjct: 347 TLLANRKR 354


>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
          Length = 554

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 119/211 (56%), Positives = 157/211 (74%), Gaps = 1/211 (0%)

Query: 130 LHNILAE-MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           L+N++ E + +V+E + V DA VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L 
Sbjct: 67  LNNLVKEWISDVSESKAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLR 126

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +D   +RSLNGCRV D+IL LVPN E F  TLR +K WAKRRG+YSN+ GFLGGV+WA+
Sbjct: 127 SLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAM 186

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTH 308
           LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWDPR N  D+ H
Sbjct: 187 LVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYH 246

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 339
            MPIITPAYP  NS+YNVSTST  VM+++F+
Sbjct: 247 LMPIITPAYPQQNSTYNVSTSTRTVMVEEFK 277


>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
          Length = 537

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 148/433 (34%), Positives = 237/433 (54%), Gaps = 21/433 (4%)

Query: 25  AGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQ 84
           A     D+ R+  L KF+  AG+  S+EE+++RE+V+  + +I  DW K++       DQ
Sbjct: 66  ATTVHMDVVRSVSLLKFIAGAGVVPSQEEEQRREEVVRELDKIVMDWAKQVAY-----DQ 120

Query: 85  MVED--ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTE 142
             +       + TFGSY LG +GP +DIDA+CVGP   S +  FF +L  +L E  EV++
Sbjct: 121 RDKHWITTGTVLTFGSYALGAYGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPEVSD 180

Query: 143 LQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCR 202
           L  +  A VP+M+FKF+G+S+D  Y  +  +   E +   D  +L  VD  + R L+G R
Sbjct: 181 LHSIESARVPLMRFKFNGVSVDFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLSGVR 240

Query: 203 VADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVP 262
           V  QI++LVPN++ F   LRCLK WA++RG+Y ++ G+  G++ A+L A VC+ +PNA  
Sbjct: 241 VNRQIMQLVPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPNASV 300

Query: 263 SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 322
           + L S FF +++ W WP PV L   D+A L    W P     D    MPI+ P +P    
Sbjct: 301 NTLFSMFFDIFSHWPWPLPVALH--DQAPL----WGP-----DGCSLMPIVMPCFPPEFC 349

Query: 323 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 382
           + +++ ST   + ++ + G  + +++      W+ +F PY +   Y ++L + + A   +
Sbjct: 350 ASSITKSTFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTE 409

Query: 383 DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEV 442
           +L  W GWV+SR R L L +E      + C P P E V+ +    +  FF GL  +  ++
Sbjct: 410 ELRDWVGWVKSRFRNLILKLES---LDVDCDPDPSEKVNHTIAAPNVVFFWGLIYRSTKI 466

Query: 443 VQEGQQFDIRGSV 455
                + D   SV
Sbjct: 467 SASSLKNDFMKSV 479


>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
          Length = 472

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/426 (33%), Positives = 224/426 (52%), Gaps = 34/426 (7%)

Query: 35  NRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMV--EDANAL 92
           +R     L + G   S E D+KREQV+ ++ +I  DW K +       +Q V    A A 
Sbjct: 18  SRRTTSLLQDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAY-----EQRVPPRRATAT 72

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
           + T+GSY LG HGP +DIDALCVGP   + +  FF +L  IL +  EV+ELQ V  A VP
Sbjct: 73  VLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESAKVP 132

Query: 153 VMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP 212
           +M+F+F G+S+D  YA +  ++       S+  +L  +D  + RSL+G RV +QI++LVP
Sbjct: 133 LMRFRFSGISVDFTYAQLPAIIT------SNPHLLQKLDSLSWRSLSGVRVNEQIVQLVP 186

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRV 272
           N + F   LRC+K WAKRRG++ ++ GF  G++ A+L A VCQ YP    + L + FF +
Sbjct: 187 NAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDI 246

Query: 273 YTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 332
           +  W W  PV L              P   RR     MPI+ P  P    + N++  T +
Sbjct: 247 FAHWNWQIPVSLHG-----------QPTNCRRPDGSFMPILLPCTPPEFCTSNMTKGTFK 295

Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
            + ++   G  + +E   +  +W  LF P+ +   Y  +L++ + A  +++L  W GWV+
Sbjct: 296 KIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWVK 355

Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 452
           SR     L+++ ++ G ++C P      D+++   H  F   +    G + +     DI 
Sbjct: 356 SR---FNLILKLESIG-VECDP------DSTEEVDHTVFEPSIVCHWGLIYKTSTHIDIS 405

Query: 453 GSVEEF 458
              E+F
Sbjct: 406 SLGEDF 411


>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
           [Anolis carolinensis]
          Length = 678

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 227/399 (56%), Gaps = 17/399 (4%)

Query: 130 LHNILAE-MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
           L+N++ E + EV + + V DA+VPV+KF+FDG+ IDL++A ++   + ++LD+ D S L 
Sbjct: 91  LNNLVKEWIAEVGKNKAVEDAYVPVIKFEFDGIEIDLVFARLALPTISDNLDLRDDSSLK 150

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF--LGGVNW 246
            +D   +RSLNG RV D+IL LVPN E+F  TLR +K WAKR+ + + +  +  L  ++W
Sbjct: 151 SLDIRCIRSLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLCLISW 210

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+L    C++Y N   S  V+R +  ++   WPNPV+L   +E+ L   VWDPR N  D+
Sbjct: 211 AVLSXITCKIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDR 270

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MPIITPAYP  NS+YNVSTST  +M+++F++G  + +E+   K+ W  L EP  FF+
Sbjct: 271 YHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPPNFFQ 330

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTS 423
            Y++Y+ +   ++  +  L W G VES++R L   +ER+   T   +    +P       
Sbjct: 331 KYKHYIVLTASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNRTQPK 390

Query: 424 KPCAHCAFFMGLQRKP---GEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR 480
           +      +F+G+  K     E V     +DI+   +      N     K GM+I  +H++
Sbjct: 391 ESDYVSLWFLGIIFKKAENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVK 450

Query: 481 RKQIPPYVFPEGYKRT--------RHPRLASQQRSSENG 511
           +KQ+  Y+  +  ++         RH RL  ++ S +N 
Sbjct: 451 KKQLHYYLPADLLQKRKKSMPDVGRHTRLVLKRTSLDNS 489



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           ++YG+T PIS+A P + D     +L + +   G++E +EE  +R  VL ++  + K+W+ 
Sbjct: 41  RRYGITSPISVAFPRDVDRIYTEKLIEAMKPFGVFEDEEELNRRVVVLDKLNNLVKEWIA 100

Query: 74  ELTRLRGYSDQMVEDANALIFTF 96
           E+ +     ++ VEDA   +  F
Sbjct: 101 EVGK-----NKAVEDAYVPVIKF 118


>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
 gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
          Length = 592

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 128/298 (42%), Positives = 188/298 (63%), Gaps = 10/298 (3%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YGVT PIS   PTE + + N  L + L   G +ES +E EKR++VL ++ +I   +V+  
Sbjct: 6   YGVTPPISTTLPTEPEKRLNHALHQELRAQGTFESPQETEKRKEVLRQLEKITTVFVQRA 65

Query: 76  TRLRGYSDQ-MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
              +   +  M+ DA   +FT+GSYRLGV+GPG+D+D L V P YV+ E+ +F I   +L
Sbjct: 66  AAQKEPKNTFMIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFEIFPEVL 124

Query: 135 AEME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASI---SRLVVREDLDISDMSVLN 188
            EM     +T+L PV +A VP++KF+F G+SIDL++ SI    +L   ++  ++D ++L 
Sbjct: 125 VEMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLLR 184

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            + E  VRSLNG RV D IL LVP    F   LR +K WA+R+ +Y+N+ G+ GGV WA+
Sbjct: 185 GLSENEVRSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAM 244

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE--LGFSVWDPRKNRR 304
           LVARVCQLYP A  +++V++FF +   W WP PV+L  I+         VW+P+ +RR
Sbjct: 245 LVARVCQLYPKATSAVVVNKFFHIMFKWPWPLPVLLKDIEYGSPVTRVPVWNPKSSRR 302


>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
          Length = 756

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/481 (34%), Positives = 246/481 (51%), Gaps = 58/481 (12%)

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           ++ ++WV+ +   RG S    + A   ++T GSYRLGVH PGADID + V PS+ SR+ D
Sbjct: 3   RLHREWVRSVAIKRGLSPDAADSAGGELYTSGSYRLGVHEPGADIDTIAVAPSFCSRD-D 61

Query: 126 FF---FI----------------------LHNILAEMEEVTELQPVLDAHVPVMKFKFDG 160
           FF   ++                      L   +     VT   PV +A VP++ F ++G
Sbjct: 62  FFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQPHVTNFVPVENAAVPILTFDWEG 121

Query: 161 LSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEH---- 216
           ++IDLL+A +S   +  + DI +  VL+ VD  T +SLNG RV + I  LV   E     
Sbjct: 122 INIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKSLNGPRVTNLIAALVGGTEQRYQT 181

Query: 217 FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           F T +R ++ WAK RG+YSN  G+ GGVN  + VA V QLYPNA P+  + +FF V+  W
Sbjct: 182 FLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALVLQLYPNACPASALRKFFLVFKSW 241

Query: 277 RWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMD 336
           RWPNPVML    +AELG  VW+  +   +     P+ITPAYP MNS+ +VS  TL+++ +
Sbjct: 242 RWPNPVMLTRPHDAELGLQVWNSHQA-ANMRQVAPMITPAYPAMNSTLSVSRQTLQILHE 300

Query: 337 QFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 396
           +F  G+ I ++          L++ Y      R   ++ I      D  AW G+VESRLR
Sbjct: 301 EFCRGHGIVDK----------LYKDYQRGRD-RPGGRLCITGPTLHDAQAWAGFVESRLR 349

Query: 397 QL-TLMIERDT-YGKLQCHPYPHEY--VDTSKPCAHC------AFFMGLQRKPGEVVQEG 446
           +L + M+ R     K+Q  P   +    D +    H        +F+G   +  ++   G
Sbjct: 350 KLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGF--RVDKLRMRG 407

Query: 447 QQFDIRGSVEEF-KLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 505
           +Q DI   +  F K  +  +    PGM+I       K++P   F   Y+     +LA+ +
Sbjct: 408 EQLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYEGG---KLAAMK 464

Query: 506 R 506
           R
Sbjct: 465 R 465


>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
          Length = 664

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 249/495 (50%), Gaps = 26/495 (5%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           PP  + V +P+ +   ++ D+Q    L ++           +   R   +  ++++   W
Sbjct: 150 PPYLHPVVQPLYLGPTSDFDVQNTHSLLRYFHSIAKLPRSSDLSHRHLAIEELQRVVDLW 209

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSRE---EDFFF 128
           + +  +   Y D  +      +F  GS+ L      +D+D +   P++V+ +    D + 
Sbjct: 210 LVQ--KFPEYPDSKIA-----LFLGGSWHLKAGFSDSDLDIVAFAPNFVTLDCFLTDLYV 262

Query: 129 ILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN 188
            L N+     ++T+L  +  A VP++ FK +G+ ID L A  + L V   L I    +L+
Sbjct: 263 YLSNL--PNSKITKLVAMKKATVPILAFKLNGVHIDFLLARSTELKVPTHLPICCDEILS 320

Query: 189 DVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
            +D  ++RS++  RV+  +L+LVP    F + +R ++ WAKRRG+YSN TGFLGG++W L
Sbjct: 321 GMDSISIRSMSIARVSSLVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFLGGISWTL 380

Query: 249 LVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC--AIDEAELGFSVWDPRKNRRDK 306
           L   +CQ+ P A  S+L+ RFF V++ W WP PV +    +  AE     W P+ N  D+
Sbjct: 381 LAVFICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNHHDR 440

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEPYLF 364
            H MPIITP YP +NS+ NV+ +TLR+M ++FQ G  I EE+    A   W  LF P  F
Sbjct: 441 AHLMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTPSEF 500

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 424
              Y NYL + + A N +DL  W  ++ SRLR+L   +E     +   HPYP     T  
Sbjct: 501 LVRYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVESLEVAIPIR-SVHPYPVLMPGTQD 559

Query: 425 PCAHCA--FFMGLQ---RKPG----EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEIC 475
           P  + +  + +G +   RK G     + +E +   +          ++     KPGM+I 
Sbjct: 560 PGVNASGYYLLGFEVENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGMKID 619

Query: 476 VSHIRRKQIPPYVFP 490
           + +     +P  V P
Sbjct: 620 LQYANWNALPLCVLP 634


>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
          Length = 545

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/432 (32%), Positives = 227/432 (52%), Gaps = 42/432 (9%)

Query: 29  EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVED 88
           E D +R+  L +FL + G   S E++ KRE+V+  +++I   W   +   +     +   
Sbjct: 76  EVDHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL--- 132

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           A A + T+GSY LG HGP +DID LC+GP   + +  FF +L  IL    EV+E+  V  
Sbjct: 133 ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 192

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VP+M+F+F G+++DL YA +  +   + ++     +L  +D  + RSL+G RV +QI+
Sbjct: 193 AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 252

Query: 209 KLVPNVEHFC----------TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           +LVPN E FC          T LRC+K WA++RG++ +  GF  G++ A+L A VC+ +P
Sbjct: 253 QLVPNAE-FCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFP 311

Query: 259 NAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +A  S L + FF+ +  W W  PV L      C   E  L                 MPI
Sbjct: 312 DASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL-----------------MPI 354

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           + P  P    +  V+  +L+ + ++   G  +  +   +  QWS LFEP+ + + Y+ +L
Sbjct: 355 VMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFL 414

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           ++ + A    +L  W GWV+SR R L L +ER     ++C P P E VD +    +  F+
Sbjct: 415 RIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPNVVFY 471

Query: 433 MGLQRKPGEVVQ 444
            GL   P  ++Q
Sbjct: 472 WGL--IPKRIIQ 481


>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
 gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
          Length = 534

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 259/507 (51%), Gaps = 47/507 (9%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +Q+GV+ P+S++  T  D+     + K L E     S+EE +  ++V   + ++  +W K
Sbjct: 10  QQWGVSPPVSLSKATPKDIAATDVMMKVLDEEAPPASEEERQLHKRVFELMSRLVTEWGK 69

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           E     G  +   ED    +   GS RLG+  P +DID + V    V+R+  FF +    
Sbjct: 70  EYAFSTGLKE---EDCRCELMAIGSARLGLQDPSSDIDCVVVAAHKVTRDA-FFELFPLK 125

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L+E+ +VT L PV  A VPV+K KF G+ +D+LY  ++  +    +D +D ++L  +DE 
Sbjct: 126 LSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPADDNLLCGMDEK 185

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           + RS+NG RV+D I   VP+  HF   LR ++ WA+RRG+YSN  G+LGGV+WA+LVARV
Sbjct: 186 SARSINGVRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGVSWAILVARV 245

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GF---SVWDPRKNRRDK 306
           CQL+PN  PS LV RFFRVY+ W W        +  +E     GF    VW P   R   
Sbjct: 246 CQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTT 305

Query: 307 THHMP-------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE--VELNKAQ-WS 356
              +P       +ITPAYP MNS++ V+  T+  +  + + G  I     V+L   + W 
Sbjct: 306 DQPLPLAASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSRECWE 365

Query: 357 ALFEPYLFFE----SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM----IERDTYG 408
            L EP  FF+     Y+ +LQ++I  A+     + +G V S+L+ L L     +  +   
Sbjct: 366 TLLEPIHFFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRKMPEVAPEDTN 425

Query: 409 KLQCHPYPHEYV--DTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEF------K 459
           K     +       D  K   +C A F+GL   PG         D+R +V EF      +
Sbjct: 426 KAPYRAWTGAVALEDPYKEYPYCSALFVGLSIPPG--------MDLRPAVREFMERLGIE 477

Query: 460 LSINMYMFWKPGM-EICVSHIRRKQIP 485
           L+  M  +   GM ++ V H+    +P
Sbjct: 478 LATQMPEYKAGGMFDVRVRHVAGPSLP 504


>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
          Length = 338

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 5/320 (1%)

Query: 46  GLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANAL-IFTFGSYRLGVH 104
            L  S+ E  +R + L ++ ++ +D+VK +       +Q  E+     + TFGSYRL VH
Sbjct: 5   NLLPSESESARRVRTLAKLNEMCRDFVKRVYEKNNLMEQYSEENPPYQLRTFGSYRLDVH 64

Query: 105 GPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSID 164
            PGAD+D + +   ++ R+ D F  L+  +   +++T L  V +A VPV+KF+ D    D
Sbjct: 65  LPGADMDTVMIVTRHIHRD-DMFNDLYVAMQARKDITNLIKVQEARVPVIKFQMDEFEFD 123

Query: 165 LLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCL 224
           L  A +S   + ED D++D   L +VD+ +V SLNG RV D I  LVP ++     +R L
Sbjct: 124 LAMARLSYATIPEDFDVTDDKHLKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLKYCIRAL 183

Query: 225 KFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML 284
           K WAK+RGVY NV GFLGG++  ++ AR+ QLYP A+PS L+  FF  Y+ W+WP PV L
Sbjct: 184 KLWAKKRGVYKNVLGFLGGISLEIMAARIGQLYPKALPSRLLYFFFFTYSQWKWPQPVGL 243

Query: 285 CAI--DEAELGFSVWD-PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
             +  +  +L   VW        D+ H MPIITP YP  N++ NVS STL+VM ++F   
Sbjct: 244 TEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQNATANVSKSTLKVMQEEFTRA 303

Query: 342 NTICEEVELNKAQWSALFEP 361
             IC+++    A+WS LFEP
Sbjct: 304 KDICKQILEGNAEWSDLFEP 323


>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
 gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
          Length = 375

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/403 (36%), Positives = 211/403 (52%), Gaps = 68/403 (16%)

Query: 108 ADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLY 167
            +IDALCV P  + R+ D+F     +L +  EVTE + V +  VP +K  FDG+ IDLL+
Sbjct: 35  TNIDALCVAPRNIERQ-DYFGSFLELLEKQPEVTECRAVEEMLVPDVKMNFDGIKIDLLF 93

Query: 168 ASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFW 227
           A ++   + ++ D+ +  +L ++D   +RSLNGCR  D+IL+LVPN+++F   LR  K W
Sbjct: 94  ARLALKEIPDNFDLREDMLLKNLDPKLMRSLNGCRATDEILRLVPNIDNFRLALRSTKLW 153

Query: 228 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI 287
           AK+ G+YS   G+ GGV+WA+LVAR CQL PN V                   PV L   
Sbjct: 154 AKKHGIYSTSLGYFGGVSWAMLVARTCQL-PNVV-------------------PVFLKRP 193

Query: 288 DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE 347
           D   LGF VWDPR N + +   MPIITPAYP  NS+++VS+ST ++M+++F  G  I +E
Sbjct: 194 DTVNLGFQVWDPRVNVQGRFDLMPIITPAYPQQNSTFHVSSSTRKIMLNEFNRGMQITDE 253

Query: 348 VELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY 407
           + L KA W  LFE   FF  YR ++ + + + N DDLL W G VES++R L   +ER  +
Sbjct: 254 IMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNTDDLLEWCGLVESKIRYLIQNLERILH 313

Query: 408 GKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMF 467
             L                AH         K  E  ++G + + R               
Sbjct: 314 INL----------------AHVHI------KVLETTRDGMKTEAR--------------- 336

Query: 468 WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSEN 510
                     H+RRKQ+  Y+ P   KR R  +   ++R   N
Sbjct: 337 ----------HVRRKQLNQYLDPNLLKRERKNQRLLRRRKCAN 369


>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 413

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 127/286 (44%), Positives = 180/286 (62%), Gaps = 7/286 (2%)

Query: 21  PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRG 80
           PIS AGPT AD+++N  + +FL  A    SKE+ EKRE+ L  +  +  DW+ E+   +G
Sbjct: 21  PISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGVQQG 80

Query: 81  YSDQMV--EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME 138
            + +    +  N  +FTFGS+RLG+  P +DID LCV P +V+RE  FF  L   L +M+
Sbjct: 81  MTAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQQMD 139

Query: 139 EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSL 198
           EV  + PV DA+ P++K    G+ IDLL+A ++        D+    +L ++D+ +VR +
Sbjct: 140 EVETVTPVPDAYAPIIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSVRCV 199

Query: 199 NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           NG RVAD ILKLVP    F   LR +K WAKRRG+Y+N+ GF GG+ WA+LVARVCQ++P
Sbjct: 200 NGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQMFP 259

Query: 259 NAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG---FSVWDPR 300
           N     LV RFF + + W W NPV LC I + +E+G   F VW+P+
Sbjct: 260 NMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305


>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
 gi|195654767|gb|ACG46851.1| poly [Zea mays]
 gi|238006566|gb|ACR34318.1| unknown [Zea mays]
 gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
          Length = 535

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 169/506 (33%), Positives = 261/506 (51%), Gaps = 44/506 (8%)

Query: 22  ISMAGPTEA----DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           + MA P E     D  R+R L KF+ +AG+  S E++ +RE+V+  + +I  DW K +  
Sbjct: 56  MHMALPREVIIYMDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMDWAKRVAY 115

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM 137
            +G    +   A+A + TFGSY LG +GP +DID LC+GP   S +  FF +L  +L   
Sbjct: 116 EQGNWHWI---ASATVLTFGSYALGAYGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGR 172

Query: 138 EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRS 197
            EV+EL  +  A VP+M+FKF+G+ +D  Y  +  +   E +   D  VL +VD P+ R 
Sbjct: 173 PEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRC 232

Query: 198 LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 257
           L+G R   QI++LVPN++ F   LRCLK WA++RG++ ++ GF  G++ A+L A VC+ +
Sbjct: 233 LSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRH 292

Query: 258 PNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR--DKTHHMPIITP 315
           PNA  + L+S FF ++  W WP PV            S+ DP    R  D    MPI+ P
Sbjct: 293 PNASINTLLSLFFDIFVHWPWPLPV------------SLLDPPVPCRGPDGCSLMPIMLP 340

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
             P    S + + ST   + ++   G  + ++       WS LF P+ +   Y+ +L++ 
Sbjct: 341 CIPPEFCSSSTTESTFSKIKEELWRGYALSKDTRSTDFNWSWLFAPFPYGARYKCFLRIV 400

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
           + A   ++L  W GWV+SR R L L +E  + G + C P P E VD +    +  FF GL
Sbjct: 401 LSAPMGEELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSEQVDHTITDPNVVFFWGL 457

Query: 436 QRKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMFWKPGMEIC------VSHIRRKQIPPY 487
                 + +   Q  I    E+F  S+  N+Y     G E C      +S +   Q+P  
Sbjct: 458 ------IYRRNIQICISSLKEDFMKSVCNNIY-----GKEKCAHSDITMSIVGPPQLPKS 506

Query: 488 VFPEGYKRTRHPR-LASQQRSSENGN 512
           VF       + P+ +   Q   +N N
Sbjct: 507 VFDLSVYSEKLPQHMMGHQLMKQNYN 532


>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
          Length = 1061

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 253/498 (50%), Gaps = 66/498 (13%)

Query: 59  QVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPS 118
           QVL ++  +   WVK + R R  S++ +      +F  GSYRLG+  P +DIDA+CV P 
Sbjct: 491 QVLKQLSDLLTKWVKMVGRERELSEEHIALTKGSLFLAGSYRLGLDDPNSDIDAVCVAPW 550

Query: 119 YVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRED 178
           +V+  +DFF    ++L +   V+ L PV +A+VP++   F G+ +DLL+A +    V  +
Sbjct: 551 HVT-HDDFFSSFCHLLEQTPGVSHLAPVPNAYVPLISLSFLGVRMDLLFARLPVSSVEPN 609

Query: 179 LDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVT 238
            +I    +L  V E ++++LN  RV+  +L LVP    +   LR ++ WA+RRG+YS   
Sbjct: 610 QNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKL 669

Query: 239 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWD 298
           G+LGG++WA+LVA VCQLYPNA P+ +  RFF+V + W+WP PVML  I +A LGF +WD
Sbjct: 670 GYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWD 729

Query: 299 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE------------ 346
           PR++  D++H MPIITPAYP MNSS  VS  T  V+ ++      + E            
Sbjct: 730 PRQSVFDRSHIMPIITPAYPHMNSSVQVSQPTFSVIYEELWRARYLAEIAVGISKPFPTA 789

Query: 347 -------EVELNKA-----------------------------------QWSALFEPYLF 364
                  E +L  A                                    W  LF+P  F
Sbjct: 790 APSPESSEADLKAAVVCMATSMPSFDQPLNAVDSTEGVVQTTQGFGEGSAWDKLFQPSNF 849

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER-DTYGKLQCHP--YPHEYVD 421
           F  Y +Y+  +  AA+   +  W  +V+SRLR+L   +       ++   P  +PH   D
Sbjct: 850 FIRYSSYMVFNFQAASESAMHKWGKFVQSRLRKLVDNLHHMSPVSRVHAFPRYFPHT-CD 908

Query: 422 TSKPCAHCAFFMGLQ--RKPGEVVQEGQQFDIRGSVEE---FKLSINMYMF--WKPGMEI 474
             +       F+G++   +  + +Q     +++ ++E+   F L+ ++      +P M  
Sbjct: 909 AERRGPGSCMFIGIEFHYRRHQTIQPKDDPEVKKTLEQAIRFFLATDLQQMEDKQPDMTA 968

Query: 475 CVSHIRRKQIPPYVFPEG 492
               +  +++P +VF  G
Sbjct: 969 DAKVLSWEELPEFVFRLG 986


>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
          Length = 508

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/450 (34%), Positives = 240/450 (53%), Gaps = 21/450 (4%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQ----RNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           PP     +  PI +A P E  M     R+R L KF+  AG+  S E++ +RE+V+  + +
Sbjct: 45  PPTTGALLPLPIPVALPHEVIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGK 104

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           I  DW + +   +G    +    +A + TFGSY LG +GP +DID LC+GP   S +  F
Sbjct: 105 IVMDWARRVAYEQGKQHWI---TSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHF 161

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F +L  +L    EV+EL  +  A VP+M+FKF+G+ +D  Y  +  +   E +   D  V
Sbjct: 162 FVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHV 221

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L +VD P+ R L+G R   QI++LVPN++ F   LRCLK WA++RG+  ++ GF  G++ 
Sbjct: 222 LENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHL 281

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+L A VC+ +PNA  + L+S FF ++  W WP PV L  +D   L            D 
Sbjct: 282 AILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPVSL--LDPPVLC--------GGPDG 331

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
              MPI+ P  P    S + + ST   + ++ + G  + ++     + WS LF P+ +  
Sbjct: 332 CSLMPIMLPCIPPEFCSSSTTESTFSKIKEELRRGYALSKDTRSTDSDWSWLFAPFPYGA 391

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
            Y+ +L++ + A   D+L  W GWV+SR R L L +E  + G + C P P + VD +   
Sbjct: 392 RYKCFLRIVLSAPMEDELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSKQVDHTITD 448

Query: 427 AHCAFFMGL-QRKPGEVVQEGQQFDIRGSV 455
            +  FF GL  R+  ++     + D   SV
Sbjct: 449 PNVVFFWGLIYRRSIQICTNSLKEDFMKSV 478


>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
          Length = 379

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 123/260 (47%), Positives = 173/260 (66%), Gaps = 1/260 (0%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+  P E D    ++L + L   G++E ++E ++R  +LG++  + K+
Sbjct: 115 PPQKHYGITSPISLVAPKETDCILTQKLIETLKPFGVFEEEKELQRRILILGKLNNLVKE 174

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W+ E++  +     + E+    IFTFGSYRLGVH  GADIDALCV P +V  + DFF   
Sbjct: 175 WIWEISESKNLPQSVNENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVD-QSDFFTSF 233

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +  L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++     EDLD+ D S+L ++
Sbjct: 234 YEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTFPEDLDLHDDSLLKNL 293

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D   +RSLNGCRV D+IL LVPN+++F  TLR +K WAK   +YSN+ GFLGGV+WA+LV
Sbjct: 294 DIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWAMLV 353

Query: 251 ARVCQLYPNAVPSMLVSRFF 270
           AR CQLYPNA+ S   S  +
Sbjct: 354 ARTCQLYPNAIASTQTSAHY 373


>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
          Length = 264

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/262 (43%), Positives = 174/262 (66%), Gaps = 5/262 (1%)

Query: 12  PPKQY-GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P K Y G+T PIS+ GP   D++ + +LE+ +   G++ES+EE   R ++L RI  + + 
Sbjct: 3   PTKNYPGITSPISLEGPKLVDLKLSEKLEEAMRPHGVFESEEEMSHRMEILNRINTLVRK 62

Query: 71  WVKELTRLRGYSDQMVEDANAL---IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
           W+K+++R +   + +    NA    +  FGSYRLG H  GADID +C+ P +V R  DFF
Sbjct: 63  WIKDVSRQKSEINYLEYKINAFGGKVCIFGSYRLGAHTKGADIDTVCIAPGHVDRS-DFF 121

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L    EV +L+ + +A+VP++K  FDG+ +D+++A ++   + +++D+ D S+L
Sbjct: 122 SSFVEVLKHTPEVKDLRAIEEAYVPLIKMTFDGIELDMVFARLTLPQIPDEIDLRDESLL 181

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
             ++   VRSLNGCRV D+IL LVPN  +F  TL  +K WAK++G+YS V GFLGGV+WA
Sbjct: 182 RHLNTKCVRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWA 241

Query: 248 LLVARVCQLYPNAVPSMLVSRF 269
           +LVARVCQLYPNA P+ L+ +F
Sbjct: 242 ILVARVCQLYPNAAPATLLHKF 263


>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 540

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/409 (33%), Positives = 221/409 (54%), Gaps = 21/409 (5%)

Query: 29  EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMV-- 86
           E D +R   L +FL + G   + EE+E RE V+  +++I  DW K +      S++ V  
Sbjct: 72  EMDYRRTHSLIQFLTDEGAIPTPEEEETRELVIRELKKIVTDWAKGVA-----SEERVPP 126

Query: 87  EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPV 146
               A + T+GSY LG HGP +DIDALCVGP   +    FF +L  IL    EV+ LQ V
Sbjct: 127 RRVTATVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFVVLRQILKCRPEVSGLQTV 186

Query: 147 LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
            +A VP+M+F+F G+S+DL YA +  L   + ++ S    L  +D  + +SL+G RV +Q
Sbjct: 187 ENAKVPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRRLDSRSWKSLSGVRVNEQ 246

Query: 207 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLV 266
           I++LVPN E F   LRC+K WA+RRG++ ++ G   G++ A+L A VCQ +PNA  + L 
Sbjct: 247 IVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHLAILAAYVCQRFPNATANGLF 306

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
           + FF ++  W W  PV L              P   R      MPI+ P  P    + N+
Sbjct: 307 TMFFGIFAHWPWHIPVDLHG-----------QPTNCRHSDGCLMPIVMPCTPPELCASNM 355

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLA 386
           +  T R + ++   G  + +++  +  +W+ +FEP+ +  +Y  +L++ + A  +++L  
Sbjct: 356 TEGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPFPYSTTYGQFLRIALCAPTSEELHD 415

Query: 387 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
           W GWV+SR   L L +E      ++C P   + VD +    +  +  GL
Sbjct: 416 WIGWVKSRFPYLILKLENI---GIECDPNSSQEVDHTVIKPNTVYHWGL 461


>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
          Length = 487

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 234/428 (54%), Gaps = 38/428 (8%)

Query: 46  GLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHG 105
             ++ +   + +++++  +RQ    W      L+ Y     E A  L   FGSYR G +G
Sbjct: 46  NFFDDEISKKTKDKLIEELRQNIIRW------LKLYQSVEQEFAGELA-VFGSYRFGANG 98

Query: 106 PGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDL 165
             +DID + + P  + RE  FF  L +IL+   +VT L  + +A VP+++FKF G+  DL
Sbjct: 99  KDSDIDLIILAPPQIDRELHFFQQLPSILSSNSKVTNLYCIQEAMVPLIRFKFAGIQFDL 158

Query: 166 LYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           ++A + ++       +  +S  + VDE + RSLNG +V+D   K   + + + + L+ +K
Sbjct: 159 VFACVKKI-------MKPLSQSDPVDEKSSRSLNGLKVSDYFSKYC-HQKSYLSFLKFIK 210

Query: 226 FWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN-PVML 284
            WA  RG+Y NV G+LGG++W +L  ++ QLYPN     L+ RFF +++ W+W   PV++
Sbjct: 211 AWAINRGIYGNVMGYLGGISWQILTHKIFQLYPNYSVQGLIERFFFIFSQWKWNELPVVI 270

Query: 285 CAIDEAELGFSVWDPRKNRRDKTHH--MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGN 342
              DE      +W      + +  H  M I+TP YP +NS+YNVS  T  ++ +Q +  N
Sbjct: 271 QKCDE------IWRNSLFEQQQKQHNVMSILTPVYPYINSAYNVSNCTFTIIEEQLKLAN 324

Query: 343 TICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI 402
            I +++ L++ QWS L +   FF+ Y  YLQ+  ++ N DDL+ WK  +ES+LR+L  M+
Sbjct: 325 IIMQKICLSELQWSDLLKKIQFFDIYYTYLQIRALSKNKDDLIQWKSHIESKLRKLNKML 384

Query: 403 -ERDTYGKLQCHPYPH----EYV-----DTSKPCAHC--AFFMGLQRKPGEVVQEGQQFD 450
            E D    ++ H YP     +YV     DT     +   +FF G++ K  E+V+E  + D
Sbjct: 385 DEGDVNKAIEFHLYPKSFQTDYVQGDENDTPGSLFNFSESFFYGIRIKDEELVKE--KLD 442

Query: 451 IRGSVEEF 458
           I   + +F
Sbjct: 443 IENIIRQF 450


>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
 gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
          Length = 431

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 212/398 (53%), Gaps = 23/398 (5%)

Query: 88  DANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVL 147
           +  A + TFGSY LG +GP +DIDA+CVGP   S +  FF +L  +L E  EV++L  + 
Sbjct: 17  NTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIE 76

Query: 148 DAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQI 207
           +A VP+M+FKF+G+ +D  Y  +  +   E +   D  +L  V+EP+ R L+G RV  QI
Sbjct: 77  NAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVRVNRQI 136

Query: 208 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 267
           ++L+PN++ F   LRCLK WA++RG++ ++ GF  G++ A+L A VC ++P+A  S L +
Sbjct: 137 MQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFN 196

Query: 268 RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVS 327
            FF +++ W WP PV L  +D+         P   R      MPI+ P  P    + +++
Sbjct: 197 SFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVMPCSPPEFCASSIT 245

Query: 328 TSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAW 387
            ST   + ++ Q G  + +        W+ LF P+ +   Y+++L++ + A  A++L  W
Sbjct: 246 RSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDW 305

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG------- 440
            GWV+SR R L L +E  + G + C P P E  D S    +  FF GL  +         
Sbjct: 306 VGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNICIDS 362

Query: 441 --EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
             E   +    DI G  +     I M + W   +  CV
Sbjct: 363 VKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 400


>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
 gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
          Length = 531

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 126/344 (36%), Positives = 191/344 (55%), Gaps = 24/344 (6%)

Query: 17  GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
           G+T  IS+A P   D  +  EL+K      ++E + +   R ++L +++ + K WV+ ++
Sbjct: 2   GMTSAISLAEPKTEDHTKTVELQKAFEPYNVFEDEPKLNHRMEILSKLKTLVKQWVRNVS 61

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
             +   + + E     I+TFGSYRL V+  G +IDALC  P  + R+ D+F     +L +
Sbjct: 62  ISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCEAPRNIERQ-DYFGSFFELLKK 120

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
             EVT  + V +A VPV+   FDG+ IDLL+A ++   + ++ D+ +  +L ++D   V 
Sbjct: 121 QPEVTGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVE 180

Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
            +   R         P  EH               G+YSN  G+ GGV+W +LVAR CQL
Sbjct: 181 RVPRHRRD-------PTAEH---------------GIYSNSLGYFGGVSWGMLVARTCQL 218

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPA 316
            PN + +  V +FF V+  W+WP PV L   D   LGF VWD R N +D+ H M IITPA
Sbjct: 219 -PNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPA 277

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
           YP  NS+++VS+ST +VM+++F     I +E+ L KA W  LFE
Sbjct: 278 YPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFE 321


>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
           Group]
          Length = 431

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 212/398 (53%), Gaps = 23/398 (5%)

Query: 88  DANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVL 147
           +  A + TFGSY LG +GP +DIDA+CVGP   S +  FF +L  +L E  EV++L  + 
Sbjct: 17  NTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIE 76

Query: 148 DAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQI 207
           +A VP+M+FKF+G+ +D  Y  +  +   E +   D  +L  V+EP+ R L+G RV  QI
Sbjct: 77  NAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAVVNEPSWRCLSGVRVNRQI 136

Query: 208 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 267
           ++L+PN++ F   LRCLK WA++RG++ ++ GF  G++ A+L A VC ++P+A  S L +
Sbjct: 137 MQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFN 196

Query: 268 RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVS 327
            FF +++ W WP PV L  +D+         P   R      MPI+ P  P    + +++
Sbjct: 197 SFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVMPCSPPEFCASSIT 245

Query: 328 TSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAW 387
            ST   + ++ Q G  + +        W+ LF P+ +   Y+++L++ + A  A++L  W
Sbjct: 246 RSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDW 305

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG------- 440
            GWV+SR R L L +E  + G + C P P E  D S    +  FF GL  +         
Sbjct: 306 VGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNICIDS 362

Query: 441 --EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
             E   +    DI G  +     I M + W   +  CV
Sbjct: 363 VKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 400


>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
           infestans T30-4]
 gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
           infestans T30-4]
          Length = 677

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 251/517 (48%), Gaps = 49/517 (9%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           +  P  +  PTE D++    L K +       + E+   +   +  ++++   W++    
Sbjct: 141 IVVPAELVPPTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRRTLD 200

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM 137
                 +      A +   GS+ L V    +D+D +   P  V+  E FF  L   L + 
Sbjct: 201 KLATDSETKSTETATLLLGGSWHLKVGNAESDLDVVAFMPHTVT-AEIFFSSLCEHLGQE 259

Query: 138 EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRL-VVREDLDI---SDMSVLNDVDEP 193
             V++L     A VPV+ F+ + + IDLL+A  ++   V + L      DM V+  +D  
Sbjct: 260 SSVSDLVARRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMDAT 319

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSL+  RVA  IL+LVPN   + + LR ++ WA+RRG+YSN  GFLGG++WA+LV  V
Sbjct: 320 SVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFV 379

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC-----AIDEAELGFSVWDPRKNRRDKTH 308
           CQ++P A  + LV RFF V   WRWP P+++         + E+    WDP+ N  D+ H
Sbjct: 380 CQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQ---WDPQHNIHDRAH 436

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWSALFEPYLF 364
            MPIITP +P +N++ NV+ STLRV+ ++F  G  I +++      + + W+ LF P   
Sbjct: 437 LMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEV 496

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-------H 417
              Y +++ +++ A N + L  W  +V SR R+L   ++  T      HP P       H
Sbjct: 497 LVRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHPLPDLVRAQGH 555

Query: 418 EYVDTSKPCAHCAFFMGL--------QRKPGE---------VVQEGQQFDIRGSVEE--- 457
           E  ++     +  FF+G         Q + G+         + +  Q+   + SV     
Sbjct: 556 ETDESDAVVGY--FFIGYTVNVPSTPQPRRGDRRHSARSPVITKNSQEELAKNSVASATR 613

Query: 458 --FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
                 +N     KPGM++ +++     +P  +FP G
Sbjct: 614 YFLATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650


>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
 gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
          Length = 677

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 251/517 (48%), Gaps = 49/517 (9%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           +  P  +  PTE D++    L K +       + E+   +   +  ++++   W++    
Sbjct: 141 IVVPAELVPPTEYDLRSTNGLTKCVNAIAPMPTAEQMSAKHLAINELQRVVDIWLRRTLD 200

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM 137
                 +      A +   GS+ L V    +D+D +   P  V+  E FF  L   L + 
Sbjct: 201 KLATDSETKSTETATLLLGGSWHLKVGNAESDLDVVAFMPHTVT-AEIFFSSLCEHLGQE 259

Query: 138 EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRL-VVREDLDI---SDMSVLNDVDEP 193
             V++L     A VPV+ F+ + + IDLL+A  ++   V + L      DM V+  +D  
Sbjct: 260 SSVSDLVARRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMDAT 319

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           +VRSL+  RVA  IL+LVPN   + + LR ++ WA+RRG+YSN  GFLGG++WA+LV  V
Sbjct: 320 SVRSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFV 379

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC-----AIDEAELGFSVWDPRKNRRDKTH 308
           CQ++P A  + LV RFF V   WRWP P+++         + E+    WDP+ N  D+ H
Sbjct: 380 CQMFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQ---WDPQHNIHDRAH 436

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWSALFEPYLF 364
            MPIITP +P +N++ NV+ STLRV+ ++F  G  I +++      + + W+ LF P   
Sbjct: 437 LMPIITPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEV 496

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP-------H 417
              Y +++ +++ A N + L  W  +V SR R+L   ++  T      HP P       H
Sbjct: 497 LVRYDHHVAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSISALHPLPDLVRAQGH 555

Query: 418 EYVDTSKPCAHCAFFMGL--------QRKPGE---------VVQEGQQFDIRGSVEE--- 457
           E  ++     +  FF+G         Q + G+         + +  Q+   + SV     
Sbjct: 556 ETDESDAVVGY--FFIGYTVNVPPTPQPRRGDRRHSARSPVITKNSQEELAKNSVASATR 613

Query: 458 --FKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEG 492
                 +N     KPGM++ +++     +P  +FP G
Sbjct: 614 YFLATELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650


>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
           CCAP 1055/1]
 gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
           CCAP 1055/1]
          Length = 336

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 195/340 (57%), Gaps = 32/340 (9%)

Query: 57  REQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVG 116
           RE+VL R+ ++ +DW++ +   +G S  +V  A   +FT GSYRLGVH PGADID + V 
Sbjct: 1   RERVLNRMGELCRDWIRTVCIKKGLSTDVVNVAGGQLFTSGSYRLGVHEPGADIDTILVS 60

Query: 117 PSYVSREEDFF--FILHNI-----------LAE----MEEVTELQPVLDAHVPVMKFKFD 159
           P+   R  DFF   IL  +           LAE      +VT   PV  A VP++ F ++
Sbjct: 61  PNACQRM-DFFGTTILSTVEGEEGTRDPTSLAERIRTHPDVTNFVPVESAAVPILTFDWE 119

Query: 160 GLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEH--- 216
           G++IDLL+A ++   V  D DI + +VL+  D  T +SLNG RV + I  LV        
Sbjct: 120 GINIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLNGPRVTNLIAALVSGTPQRYQ 179

Query: 217 -FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTM 275
            F T +RC++ WAK RG+YSN  G+ GGVN  + VA V QLYPNA  + L+ +FF V+  
Sbjct: 180 VFLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQLYPNACGASLLRKFFLVFKT 239

Query: 276 WRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMM 335
           WRWP P++L    +A  G  VW      R      P+ITPAYP MNS+  VS  TL+++ 
Sbjct: 240 WRWPQPLLLTKPHDAGYGLPVWSVATAVR---QVAPMITPAYPAMNSTLAVSRQTLQILQ 296

Query: 336 DQFQYGNTICEEV----ELNKAQ---WSALFEPYLFFESY 368
           ++F  G+T+ +++    + N AQ   W+ LFEP  FF +Y
Sbjct: 297 EEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336


>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
 gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 687

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/427 (35%), Positives = 216/427 (50%), Gaps = 34/427 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K IS  GP+ A+   N  L ++   AG+ E +EE  +R  VL  I  I + W++
Sbjct: 6   KSFLAKKIISSDGPSPAEEDHNVPLVEWCA-AGI-EPEEEANRRRSVLEHINCIVRAWIR 63

Query: 74  ELT----RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI 129
                  R+   +   VE     IF  GSYR  VHG G+DID + + P+ ++RE  FF  
Sbjct: 64  STMIAEFRMPAEAAAQVE---GRIFATGSYRYNVHGSGSDIDIVLIAPNRITREH-FFNT 119

Query: 130 LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLND 189
           L   L+    +TEL  + DA VP++    DG+ IDL + SI +  V E   I+D  +L  
Sbjct: 120 LAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPEV--ITD-DLLQG 176

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +D+ +V S N  RVA  I+ LVP+   F   LR +K W K RG+YSN  GF  G+ WA+L
Sbjct: 177 LDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAIL 236

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDP 299
           VA VCQ +PN   + +V RFFR+Y  W  PNP         + L      +      WDP
Sbjct: 237 VAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDP 296

Query: 300 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE-----VELNKAQ 354
           R+++ D     P++TPA P  N+ YNV+ + LR + D+F  G+ IC       VE  K +
Sbjct: 297 RESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMK 356

Query: 355 ------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG 408
                 WS + EP  FF  Y+ YL V +   +A+    +   VES++R L          
Sbjct: 357 LGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQ 416

Query: 409 KLQCHPY 415
            L+  P+
Sbjct: 417 SLESFPH 423


>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
          Length = 493

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 111/259 (42%), Positives = 163/259 (62%), Gaps = 2/259 (0%)

Query: 162 SIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL 221
           SIDL+YA +    V  +LD+ +  +L  +DE  +R +NG RV D+IL+LVP  + F   L
Sbjct: 50  SIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLAL 109

Query: 222 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
           R +K WA+RR +YSN+ GF GGV WA+LVARVCQLYP A  S +V +FFR+   W+WP P
Sbjct: 110 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQP 169

Query: 282 VMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
           V+L  I+E  L   VW+P+    DK H MPIITPAYP M +++NVS ST  V++ + + G
Sbjct: 170 VLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRG 229

Query: 342 NTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 400
             I +++ + +  W+ LF  + FF + Y+ YL +   + + D    W G VES+LR L  
Sbjct: 230 GDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVG 289

Query: 401 MIERDTYGKLQCHPYPHEY 419
            ++R +  ++  HP+P  +
Sbjct: 290 ALDRKSSIEI-AHPFPKGF 307


>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 706

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 227/444 (51%), Gaps = 38/444 (8%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S+    K +   K +S  GP   ++  +  L ++ +     E +EE  +R  VL RI  +
Sbjct: 3   SATATDKDFLAKKIVSADGPKGGEVVHDVSLSEWCIT--RIEPEEESNRRRSVLERIVNV 60

Query: 68  AKDWVKE--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
            + W++   +T  R   +         IF  GSYR  VH  G+DID + + PS ++RE  
Sbjct: 61  VRVWIRHTMITEFR-MPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH- 118

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF  L   L     VTEL  + ++ VP++    DG+ IDL + SI +  V E   I+D  
Sbjct: 119 FFNTLAPRLKGEPWVTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPEV--ITD-D 175

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           +L  +DE +V S N  RVA  I+ LVPN   F  TLR +K W K R +YSN  GF  G+ 
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGF 294
           WA+L A VCQ YPN   + +++RFFR Y  W  PNP      + A            LG 
Sbjct: 236 WAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295

Query: 295 SVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKA 353
             WDPR+++ D     P++TPA P  N+ YNV+ + LR + D+FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354

Query: 354 Q----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----- 398
           +          WS + EP  FF  +++YLQ+ +  ++A+   A+   VESR+R L     
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414

Query: 399 -TLMIERDTYGKLQCHPYPHEYVD 421
            +     + Y +L+ H  PH + D
Sbjct: 415 SSRGHTLEDYRQLRLHLNPHRFED 438


>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 687

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/427 (34%), Positives = 215/427 (50%), Gaps = 34/427 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K IS  GP+ A+   N  L ++   AG+ E +EE  +R  VL  I  I + W++
Sbjct: 6   KSFLAKKIISSDGPSPAEEDHNVPLVEWCA-AGI-EPEEEANRRRSVLEHINCIVRAWIR 63

Query: 74  ELT----RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI 129
                  R+   +   VE     IF  GSYR  VHG G+DID + + P+ ++RE  FF  
Sbjct: 64  STMIAEFRMPAEAAAQVE---GRIFATGSYRYNVHGSGSDIDIVLIAPNRITREH-FFNT 119

Query: 130 LHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLND 189
           L   L+    +TEL  + DA VP++    DG+ IDL + SI +  V E   I+D  +L  
Sbjct: 120 LAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPEV--ITD-DLLQG 176

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           +D+ +V S N  RVA  I+ L P+   F   LR +K W K RG+YSN  GF  G+ WA+L
Sbjct: 177 LDDQSVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAIL 236

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDP 299
           VA VCQ +PN   + +V RFFR+Y  W  PNP         + L      +      WDP
Sbjct: 237 VAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDP 296

Query: 300 RKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE-----VELNKAQ 354
           R+++ D     P++TPA P  N+ YNV+ + LR + D+F  G+ IC       VE  K +
Sbjct: 297 RESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMK 356

Query: 355 ------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYG 408
                 WS + EP  FF  Y+ YL V +   +A+    +   VES++R L          
Sbjct: 357 LGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQ 416

Query: 409 KLQCHPY 415
            L+  P+
Sbjct: 417 SLESFPH 423


>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
          Length = 484

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/275 (40%), Positives = 175/275 (63%), Gaps = 4/275 (1%)

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLY---ASISRLVVREDLDISDMSVLNDV 190
           +A    +T+L  V+DA VP++KF+F G+SIDL++   A++ +L    + ++SD ++L  +
Sbjct: 1   MAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGL 60

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           DE  +RS+NG RV D+I+ LVP    F T LR +K WA+RR +Y N+ GF GGV WA+LV
Sbjct: 61  DEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLV 120

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM 310
           ARVCQLYP A  S++V++FF +   W WP PV+L AI++  L   +W+P+    D+ H M
Sbjct: 121 ARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLM 180

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYR 369
           PIITPAYP M +++N++ S+  V+  +      +   + + K  W  LF+ + FF + ++
Sbjct: 181 PIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFK 240

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
            Y+QV   + + +    W G+VES++R L   +ER
Sbjct: 241 YYIQVIAASKDKESHKLWSGFVESKVRLLVQGLER 275


>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
          Length = 799

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/423 (34%), Positives = 218/423 (51%), Gaps = 34/423 (8%)

Query: 41  FLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYR 100
           F+      E++E    + ++L  I      W+K L    G + + +      +F  GSYR
Sbjct: 276 FIDHLAPVETEETKPMKVRMLKSISDALNRWIKVLGYEVGLTQEQIAITQGALFLAGSYR 335

Query: 101 LGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDG 160
           LG+H P +DID +C  P +VS   DFF     +L  M +VTEL  V +A VP++   +  
Sbjct: 336 LGLHDPDSDIDVVCAVPYHVS-HRDFFCGFSAVLTRMTQVTELVTVPNASVPLISLSYQS 394

Query: 161 LSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTT 220
           + +DLL+A +  L +  DLDI    +L  V   +V+SLN  RV+  IL LVPN + F   
Sbjct: 395 IKLDLLFAQLPLLSIGADLDIHSDHILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRV 454

Query: 221 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN 280
            R ++ WA+RRG+YS+  G+L G+NWALL A VCQL+P    S +   FF V + W+WP 
Sbjct: 455 SRAIRAWARRRGIYSSKLGYLSGINWALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPK 514

Query: 281 PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
           P+ML    +A+LG   W  +   RD+TH MPIITPAYP MNSS  V+ STL V+ ++   
Sbjct: 515 PIMLNIPYDAKLGLECWSFQ--LRDRTHVMPIITPAYPQMNSSAQVTASTLSVIKEELWR 572

Query: 341 GNTICEEVELNKA-------------------------QWSALFEPYLFFESYRNYLQVD 375
              + E   L+                            W  L++P  FF  Y  Y+ + 
Sbjct: 573 ARDLLEREILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLT 632

Query: 376 IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
           I   ++ +L  W+ +V SRL +L  M++      L  H YP   V+     A  + F+GL
Sbjct: 633 I-QIDSSELGRWETFVCSRLHKLVKMLQDLPMIDL-VHGYPQFLVNK----AGSSLFLGL 686

Query: 436 QRK 438
           +R+
Sbjct: 687 KRR 689


>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
          Length = 677

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 225/435 (51%), Gaps = 36/435 (8%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K IS  GP+ ++ + N  L ++ V AG+ E +EE  +R  VL  I  I + W++
Sbjct: 6   KSFLAKKIISNDGPSPSEEEHNAPLVEWCV-AGI-EPEEEANRRRSVLEHINCIVRAWIR 63

Query: 74  E--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
              +T  R  ++   +     IF  GSYR  VHG G+DID + + P+ ++RE  FF  L 
Sbjct: 64  STMITEFRMPAEAAAQ-VEGRIFATGSYRYNVHGSGSDIDIVLIAPNRITREH-FFNTLA 121

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L+    +T+L  + DA VP++    DG+ IDL + SI +  V E   I+D  +L  +D
Sbjct: 122 PRLSHEPRITKLHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPEV--ITD-DLLQGLD 178

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           + +V S N  RVA  I+ LVP+   F   LR +K W K RG+YSN  GF  G+ WA+LVA
Sbjct: 179 DQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVA 238

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFS-VWDPRK 301
            VCQ +PN   + +V RFFR+Y  W  PNP         + L      +      WDPR+
Sbjct: 239 FVCQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGRCWDPRE 298

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE---VELNKAQ---- 354
           ++ D     P++TPA P  N+ +NV+ + LR +  +F  G+ IC     + +N+ +    
Sbjct: 299 SKSDALALFPVLTPAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNETKEKFG 358

Query: 355 ----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL------TLMIER 404
               WS + EP  FF  Y+ Y+ V +  ++A+    +   VES++R L      +     
Sbjct: 359 PHGLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAESRAQSI 418

Query: 405 DTYGKLQCHPYPHEY 419
           +++  +Q H  P  Y
Sbjct: 419 ESFPHIQLHLNPRRY 433


>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
          Length = 695

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 219/411 (53%), Gaps = 16/411 (3%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE-LT 76
           +  P  ++ P E D++    L K +       + E+   +  V+  +++I   W++  L 
Sbjct: 160 IVVPAELSPPNEYDLRSTNGLMKCVNAIAPLPTPEQLSAKHLVINELQRIVDIWLRRTLD 219

Query: 77  RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
            L G ++    +   L+   GS+ L V    +D+D +   P  ++  E FF  L   L +
Sbjct: 220 ALEGATETKSTETATLLLG-GSWHLKVGMAESDLDVVAFMPHAIT-SEIFFSSLCEHLGK 277

Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASIS-RLVVREDLDI---SDMSVLNDVDE 192
              V++L     A VPV+ F+   + +DLL+A  + +  V + L      D+ V+  +D 
Sbjct: 278 EASVSDLVARRKAAVPVLSFQLSSVRVDLLFARYAQKQAVPKHLPFLPGDDVQVMRGMDA 337

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
            +VRSL+  RVA  IL+LVPN   F +TLR ++ WA+RRG+YSN  G+LGG++WALLV  
Sbjct: 338 TSVRSLSVARVASLILELVPNASVFRSTLRVIRLWARRRGLYSNKAGYLGGISWALLVCF 397

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAID---EAELGFSVWDPRKNRRDKTHH 309
           VCQ++P A  + LV RFF V   WRWP P+++       + + G   WDP  N  D+ H 
Sbjct: 398 VCQMFPRASVASLVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQ-WDPAHNIHDRAHL 456

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVEL----NKAQWSALFEPYLFF 365
           MPIITP +P +N++ NV+ STLRV+ ++F  G  I +++      + + W+ LF P    
Sbjct: 457 MPIITPGFPAVNTAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVL 516

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 416
             Y +++ +++ A N + L  W  +V SR R+L   ++  T      HP P
Sbjct: 517 VRYDHHIAIELRAPNEEALAEWSSFVASRTRKLVETLQH-TPSVATLHPLP 566


>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
           CBS 2479]
 gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 573

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 176/592 (29%), Positives = 271/592 (45%), Gaps = 116/592 (19%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +  GVT PIS+  P EAD++ +    +  V AG          +  +L  I Q+   +V 
Sbjct: 8   RMLGVTPPISLDPPKEADVKAS----EVRVGAG---------AQSPLLSNIAQLVTKFVH 54

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++   G S+++  +A   I+T  ++RLGVHGPG+DID +CV P +V RE  FF     +
Sbjct: 55  DVSIKNGLSEKVATEAGGRIYT-SAFRLGVHGPGSDIDTICVCPKHVYREH-FFGEFQQM 112

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
           L +    TE+     A VPVMK    G+ +DLL+A ++     + LDI    +L  VD+ 
Sbjct: 113 LRDWPACTEIS---SAFVPVMKTVISGVEVDLLFARVNLPEAGDKLDIEKDEILRGVDDA 169

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
           + RSLN   V D IL LVP+V  F T LR ++ WAK          F GGV WALL AR+
Sbjct: 170 SQRSLN---VTDMILNLVPDVATFRTALRTIRLWAK---------SFPGGVAWALLTARI 217

Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
           CQLYPNA PS +VS+FF +Y  W                                 MP+I
Sbjct: 218 CQLYPNAAPSTIVSKFFPIYYQW---------------------------------MPVI 244

Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
           TPAYP M S++N++ ST+ ++ ++      +        + W  LF P  FF  YR Y+Q
Sbjct: 245 TPAYPSMCSTHNITQSTMTIIKNEMLRDKIVNNP----GSSWVELFTPVDFFSLYRTYVQ 300

Query: 374 VDIVAANADDLLAWKGWVESRLRQLTL--------------------MIERDTYGKLQCH 413
           V   A++A DL   K W+ + ++ L +                    + E +     Q  
Sbjct: 301 VVASASSAQDL---KDWLRTLVQDLEMTDNVLLAHPQVNGISKTYICLTEEEQAQASQGE 357

Query: 414 PYP-------HEYVDTSKPCAHCA-FFMGL--QRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
             P        +Y D      +   FF+GL  ++KP +  Q+ +Q ++  + + F  +  
Sbjct: 358 LPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKD-GQQPRQLNLYYASKRFCFACQ 416

Query: 464 MY-MFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRS------SENGNEYQT 516
            +  + +  M + +   +R ++P + FP+G    +     +QQ        +      QT
Sbjct: 417 SWDKYNEQDMSVILRPCKRSELPAFCFPDGQPPKKKKGKRAQQEKVGDAALATEAEGGQT 476

Query: 517 GSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEP 568
           GS    +   E  D+ GP KR    P       P+   P  V S TG++  P
Sbjct: 477 GSQQAGESAGEITDEQGPSKRSKAEP------DPNGAVP--VPSATGADPAP 520


>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
 gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
 gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
 gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
          Length = 709

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/448 (33%), Positives = 227/448 (50%), Gaps = 46/448 (10%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S+    K +   K +S  GP   ++  +  L ++ +     E +EE  +R  VL RI  +
Sbjct: 3   STTATDKDFLAKKIVSADGPRGGEVVHDVSLSEWCIT--RIEPEEESNRRRSVLERIVNV 60

Query: 68  AKDWVKE--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
            + W++   +T  R   +         IF  GSYR  VH  G+DID + + PS ++RE  
Sbjct: 61  VRVWIRHTMITEFR-MPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH- 118

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF  L   L     VT+L  + ++ VP++    DG+ IDL + SI +  V E   I+D  
Sbjct: 119 FFNTLAPRLKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPEV--ITD-D 175

Query: 186 VLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           +L  +DE +V S N  RVA  I+ LVPN   F  TLR +K W K R +YSN  GF  G+ 
Sbjct: 176 LLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIG 235

Query: 246 WALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGF 294
           WA+L A VCQ YPN   + +V+RFFR Y  W  PNP      + A            LG 
Sbjct: 236 WAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR 295

Query: 295 SVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKA 353
             WDPR+++ D     P++TPA P  N+ YNV+ + LR + D+FQ G + + +++ ++ A
Sbjct: 296 G-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAA 354

Query: 354 Q----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL----- 398
           +          WS + EP  FF  +++YLQ+ +  ++A+   A+   VESR+R L     
Sbjct: 355 EAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNA 414

Query: 399 -----TLMIERDTYGKLQCHPYPHEYVD 421
                TL    + Y +L+ H  P  + D
Sbjct: 415 SSRGHTL----EDYRQLRLHLNPRRFED 438


>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
           strain Friedlin]
 gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
           strain Friedlin]
          Length = 700

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/438 (33%), Positives = 223/438 (50%), Gaps = 38/438 (8%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K +S  GP   ++     L ++ +     E +EE  +R  VL RI  + + W++
Sbjct: 9   KDFLAKKIVSADGPKGGEVVHELSLSEWCITR--IEPEEESNRRRSVLERIVNVVRVWIR 66

Query: 74  E--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
              +T  R   +         IF  GSYR  VH  G+DID + + PS ++RE  FF  L 
Sbjct: 67  HTMITEFR-MPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNTLA 124

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L     VT+L  + ++ VP++    DG+ IDL + SI +  V E   I+D  +L  +D
Sbjct: 125 PRLKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPEV--ITD-DLLQGLD 181

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           E +V S N  RVA  I+ LVPN   F  TLR +K W K R +YSN  GF  G+ WA+L A
Sbjct: 182 EQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTA 241

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------ELGFSVWDPR 300
            VCQ YPN   + +V+RFFR Y  W  PNP      + A            LG   WDPR
Sbjct: 242 FVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRG-WDPR 300

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELNKAQ----- 354
           +++ D     P++TPA P  N+ YNV+ + LR + D+FQ G + + +++ ++ A+     
Sbjct: 301 ESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKF 360

Query: 355 -----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL------TLMIE 403
                WS + EP  FF  +++YLQ+ +  ++A+   A+   VESR+R L      +    
Sbjct: 361 GPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHT 420

Query: 404 RDTYGKLQCHPYPHEYVD 421
            + Y +L+ H  P  + D
Sbjct: 421 LEDYRQLRLHLNPRRFED 438


>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
          Length = 455

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/432 (32%), Positives = 210/432 (48%), Gaps = 54/432 (12%)

Query: 29  EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMV-- 86
           + D +R   L +FL + G   S E D+KREQV+ ++ +I  DW K +       +Q V  
Sbjct: 15  QMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAY-----EQRVPP 69

Query: 87  EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPV 146
             A A + T+GSY LG HGP +DIDALCVGP   + +  FF +L  IL +  EV+ELQ V
Sbjct: 70  RRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTV 129

Query: 147 LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
             A                           + +  S+  +L  +D  + RSL+G RV +Q
Sbjct: 130 ESA---------------------------KAIITSNPHLLQKLDSRSWRSLSGVRVNEQ 162

Query: 207 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLV 266
           I++LVPN + F   LRC+K WAKRRG++ ++ GF  G++ A+L A VCQ YP    + L 
Sbjct: 163 IVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLF 222

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
           + FF ++  W W  PV L              P   RR     MPI+ P  P    + N+
Sbjct: 223 TIFFDIFAHWNWQIPVSLHG-----------QPTNCRRPDGSFMPILLPCTPPEFCTSNM 271

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLA 386
           +  T + + ++   G  + +E   +  +W  LF P+ +   Y  +L++ + A  +++L  
Sbjct: 272 TKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRD 331

Query: 387 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEG 446
           W GWV+SR R L L +E      ++C P   E VD      H  F   +    G + +  
Sbjct: 332 WAGWVKSRFRNLILKLESI---GVECDPDSTEEVD------HTVFEPSIVCHWGLIYKTS 382

Query: 447 QQFDIRGSVEEF 458
              DI    E+F
Sbjct: 383 THIDISSLGEDF 394


>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
           putative [Trypanosoma cruzi marinkellei]
          Length = 645

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 143/408 (35%), Positives = 210/408 (51%), Gaps = 30/408 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K IS  GP+  + + N  L  + V AG+ E +EE  +R  VL  I  I + W++
Sbjct: 6   KAFLAKKVISSDGPSPKEEEHNVSLVDWCV-AGI-EPEEEANRRRSVLEHINNIVRAWIR 63

Query: 74  E--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
              +T  R  ++   +     IF  GSYR  VH  G+DID + + P+ ++RE  FF  L 
Sbjct: 64  STMITEFRMPAEAATQ-VEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFNTLA 121

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L     +TEL  + DA VP++    DG+ IDL + SI +  V E   I+D  +L  +D
Sbjct: 122 PRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPEV--ITD-DLLQGLD 178

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           + +V S N  RVA  I+ LVP+   F   LR +K W K RG+YSN  GF  G+ WA+LVA
Sbjct: 179 DQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVA 238

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRK 301
            VCQ +PN   + +V RFFR+Y  W  PNP         + L      +      WDPR+
Sbjct: 239 FVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRE 298

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ------- 354
           ++ D     P++TPA P  N+ +NV+ + LR +  +F  G+ IC    +  A+       
Sbjct: 299 SKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEEAKSRFG 358

Query: 355 ----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
               WS L EP  FF +Y+ YL V +   +A+    +   VES++R L
Sbjct: 359 PHGIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406


>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
 gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
          Length = 645

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/408 (35%), Positives = 209/408 (51%), Gaps = 30/408 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K IS  GP+  + + N  L  + V AG+ E +EE  +R  VL  I  I + W++
Sbjct: 6   KAFLAKKVISSDGPSPKEEEHNVSLVDWCV-AGI-EPEEEANRRRSVLEHINNIVRAWIR 63

Query: 74  E--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
              +T  R  ++   +     IF  GSYR  VH  G+DID + + P+ ++RE  FF  L 
Sbjct: 64  STMITEFRMPAEAATQ-VEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFNTLA 121

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L     +TEL  + DA VP++    DG+ IDL + SI +  V E   I+D  +L  +D
Sbjct: 122 PRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPEV--ITD-DLLQGLD 178

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           + +V S N  RVA  I+ LVP+   F   LR +K W K RG+YSN  GF  G+ WA+LVA
Sbjct: 179 DQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVA 238

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRK 301
            VCQ +PN   + +V RFFR+Y  W  PNP         + L      +      WDPR+
Sbjct: 239 FVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRE 298

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ------- 354
           ++ D     P++TPA P  N+ +NV+ + LR +  +F  G+ IC    +  A+       
Sbjct: 299 SKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFG 358

Query: 355 ----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
               WS L EP  FF  ++ YL V +   +A+    +   VESR+R L
Sbjct: 359 PHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406


>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
 gi|194707762|gb|ACF87965.1| unknown [Zea mays]
          Length = 430

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 198/372 (53%), Gaps = 39/372 (10%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           A A + T+GSY LG HGP +DID LC+GP   + +  FF +L  IL    EV+E+  V  
Sbjct: 18  ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 77

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VP+M+F+F G+++DL YA +  +   + ++     +L  +D  + RSL+G RV +QI+
Sbjct: 78  AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 137

Query: 209 KLVPNVEHFC----------TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           +LVPN E FC          T LRC+K WA++RG++ +  GF  G++ A+L A VC+ +P
Sbjct: 138 QLVPNAE-FCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFP 196

Query: 259 NAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +A  S L + FF+ +  W W  PV L      C   E  L                 MPI
Sbjct: 197 DASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL-----------------MPI 239

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           + P  P    +  V+  +L+ + ++   G  +  +   +  QWS LFEP+ + + Y+ +L
Sbjct: 240 VMPCTPLEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFL 299

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           ++ + A    +L  W GWV+SR R L L +ER     ++C P P E VD +    +  F+
Sbjct: 300 RIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPNVVFY 356

Query: 433 MGLQRKPGEVVQ 444
            GL   P  ++Q
Sbjct: 357 WGL--IPKRIIQ 366


>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
           putative [Trypanosoma cruzi]
          Length = 645

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/408 (34%), Positives = 209/408 (51%), Gaps = 30/408 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K IS  GP+  + + N  L  + V AG+ E +EE  +R  VL  I  I + W++
Sbjct: 6   KAFLAKKVISSDGPSPKEEEHNVSLVDWCV-AGI-EPEEEANRRRSVLEHINNIVRAWIR 63

Query: 74  E--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
              +T  R  ++   +     IF  GSYR  VH  G+DID + + P+ ++RE  FF  L 
Sbjct: 64  STMITEFRMPAEAATQ-VEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFNTLA 121

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L     +TEL  + DA VP++    DG+ IDL + SI +  V E   I+D  +L  +D
Sbjct: 122 PRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPEV--ITD-DLLQGLD 178

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           + +V S N  RVA  I+ LVP+   F   LR +K W K RG+YSN  GF  G+ WA+LVA
Sbjct: 179 DQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVA 238

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRK 301
            VCQ +PN   + +V RFFR+Y  W  PNP         + L      +      WDPR+
Sbjct: 239 FVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRE 298

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ------- 354
           ++ D     P++TPA P  N+ +NV+ + LR +  +F  G+ IC    +  A+       
Sbjct: 299 SKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFG 358

Query: 355 ----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
               WS L EP  FF  ++ YL V +   +A+    +   VES++R L
Sbjct: 359 PHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406


>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
          Length = 430

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 198/372 (53%), Gaps = 39/372 (10%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           A A + T+GSY LG HGP +DID LC+GP   + +  FF +L  IL    EV+E+  V  
Sbjct: 18  ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEK 77

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VP+M+F+F G+++DL YA +  +   + ++     +L  +D  + RSL+G RV +QI+
Sbjct: 78  AKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIV 137

Query: 209 KLVPNVEHFC----------TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           +LVPN E FC          T LRC+K WA++RG++ +  GF  G++ A+L A VC+ +P
Sbjct: 138 QLVPNAE-FCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFP 196

Query: 259 NAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           +A  S L + FF+ +  W W  PV L      C   E  L                 MPI
Sbjct: 197 DASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL-----------------MPI 239

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
           + P  P    +  V+  +L+ + ++   G  +  +   +  QWS LFEP+ + + Y+ +L
Sbjct: 240 VMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFL 299

Query: 373 QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
           ++ + A    +L  W GWV+SR R L L +ER     ++C P P E VD +    +  F+
Sbjct: 300 RIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEEVDHTDNDPNVVFY 356

Query: 433 MGLQRKPGEVVQ 444
            GL   P  ++Q
Sbjct: 357 WGL--IPKRIIQ 366


>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
          Length = 438

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 140/400 (35%), Positives = 194/400 (48%), Gaps = 83/400 (20%)

Query: 46  GLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHG 105
           G +E++EE ++RE VLGR+  + K +V  +   +G S    E +   IFTFGSYRLGVHG
Sbjct: 8   GTFETEEEAKRREIVLGRLASLVKRFVTRIGIKQGLSQAAAEASGGKIFTFGSYRLGVHG 67

Query: 106 PGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDL 165
           PG+DID LCV P +VSRE DFF     +L   E V E   V DA+VP++K K  G+ IDL
Sbjct: 68  PGSDIDTLCVVPKHVSRE-DFFEDFEEMLKATEGVDEASAVPDAYVPIIKTKISGIPIDL 126

Query: 166 LYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           L A   RL +     I D   L D               D +L+   N++  C       
Sbjct: 127 LMA---RLALS---SIPDTLTLQD---------------DNLLR---NLDERC------- 155

Query: 226 FWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLC 285
                                         LYPNA+   +VSRFF +   W WP PV+L 
Sbjct: 156 ------------------------------LYPNAIAGAIVSRFFIIMYQWTWPQPVLLK 185

Query: 286 AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ------ 339
            I+E  L   VW+P+    D+ H MPIITPAYP M +++NV+ ST  +M ++F+      
Sbjct: 186 QIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTASTQMIMTEEFKKGQLEF 245

Query: 340 ----------YGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKG 389
                      G+ I + V +  A WS LF  + FF  YR YLQV     +++  + W G
Sbjct: 246 YSPGRYLLFLAGSEIVDRVIVGSADWSELFSKHDFFHKYRYYLQVIASTGSSELQIKWAG 305

Query: 390 WVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 429
            VESR+RQL + +E      +      H ++   +   HC
Sbjct: 306 TVESRIRQLVMKLEY-----VDSLTLAHPFIKGFEQVLHC 340


>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 709

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 151/450 (33%), Positives = 227/450 (50%), Gaps = 50/450 (11%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S+    K +   K +S  GP   ++  +  L ++ +     E +EE  +R  VL RI  +
Sbjct: 3   SAAATDKDFLAKKIVSADGPKGGEVVHDVSLGEWCITR--IEPEEESNRRRSVLERIVNV 60

Query: 68  AKDWVKELTRLRGYSDQMVEDANA----LIFTFGSYRLGVHGPGADIDALCVGPSYVSRE 123
            + W++  T +  +  +M E A A     IF  GSYR  VH  G+DID + + PS ++RE
Sbjct: 61  VRVWIRH-TMIAEF--RMPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITRE 117

Query: 124 EDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISD 183
             FF  L   L     VTEL  + ++ VP++    DG+ IDL + SI +  V E   I+D
Sbjct: 118 H-FFNTLAPRLKGEPWVTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPEV--ITD 174

Query: 184 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 243
             +L  +DE +V S N  RVA  I+ LVPN   F   LR +K W K R +YSN  GF  G
Sbjct: 175 -DLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQALRFVKAWGKARSIYSNTFGFPSG 233

Query: 244 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-----------EL 292
           + WA+L A VCQ YPN   + +++RFFR Y  W  PNP      + A            L
Sbjct: 234 IGWAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHL 293

Query: 293 GFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG-NTICEEVELN 351
           G   WDPR+++ D     P++TPA P  N+ YNV+ + LR + D+FQ G + +  ++ ++
Sbjct: 294 GRG-WDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMS 352

Query: 352 KAQ----------WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL--- 398
             +          WS + EP  FF  +R+YL + +  ++A+   A+   VESR+R L   
Sbjct: 353 AVEAEAKFGPFGVWSRVLEPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRILWAG 412

Query: 399 -------TLMIERDTYGKLQCHPYPHEYVD 421
                  TL    + Y +L+ H  P  + D
Sbjct: 413 NASSRGHTL----EDYRQLRLHLNPRRFED 438


>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
          Length = 671

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/408 (34%), Positives = 210/408 (51%), Gaps = 30/408 (7%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +   K IS  GP+ A+ + N  L ++ V AG+ E +EE  +R  VL  +  I + W++
Sbjct: 6   KSFLAKKVISADGPSPAEEEHNAPLVEWCV-AGI-EPEEEANRRRSVLEHLNCIVRAWIR 63

Query: 74  E--LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
              +T  R  ++   +     IF  GSYR  VH  G+DID + + P+ ++RE  FF  L 
Sbjct: 64  STMITEFRMPAEAAAQ-VEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-FFDTLA 121

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
             L+    VTEL  + DA VP++    DG+ IDL + SI +  V E   I+D  +L  +D
Sbjct: 122 PRLSHEARVTELHCIRDARVPLIAMVVDGIDIDLSFGSIRQDRVPEV--ITD-DLLRGLD 178

Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
           + +V S N  RVA  I+ LVP+   F   LR +K W K RG+YSN  GF  G+ WA+LVA
Sbjct: 179 DQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVA 238

Query: 252 RVCQLYPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFS-VWDPRK 301
            V Q +PN   + +V RFFR+Y  W  PNP         + L      +      WDPR+
Sbjct: 239 FVSQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLGRCWDPRE 298

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE---VELNKAQ---- 354
           ++ D     P++TPA P  N+ YNV+ + LR +  +F  G+ IC     + +N  +    
Sbjct: 299 SKSDALALFPVLTPAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVNDTRTKFG 358

Query: 355 ----WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
               W+ + EP   F  YR YL + I   + +    +   VES++R L
Sbjct: 359 KYGLWNKILEPVKVFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFL 406


>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
          Length = 454

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 212/432 (49%), Gaps = 55/432 (12%)

Query: 29  EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMV-- 86
           + D +R   L +FL + G   S E D+KREQV+ ++ +I  DW K +       +Q V  
Sbjct: 15  QMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAY-----EQRVPP 69

Query: 87  EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPV 146
             A A + T+GSY LG HGP +DIDALCVGP   + +  FF +L  IL +  EV+ELQ V
Sbjct: 70  RRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTV 129

Query: 147 LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
             A                           + +  S+  +L  +D  + RSL+G RV +Q
Sbjct: 130 ESA---------------------------KAIITSNPHLLQKLDSLSWRSLSGVRVNEQ 162

Query: 207 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLV 266
           I++LVPN + F   LRC+K WAKRRG++ ++ GF  G++ A+L A VCQ YP    + L 
Sbjct: 163 IVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLF 222

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
           + FF ++  W W  PV L              P   RR     MPI+ P  P    + N+
Sbjct: 223 TIFFDIFAHWNWQIPVSLHG-----------QPTNCRRPDGSFMPILLPCTPPEFCTSNM 271

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLA 386
           +  T + + ++   G  + +E   +  +W  LF P+ +   Y  +L++ + A  +++L  
Sbjct: 272 TKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRD 331

Query: 387 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEG 446
           W GWV+SR     L+++ ++ G ++C P   E VD      H  F   +    G + +  
Sbjct: 332 WAGWVKSR---FNLILKLESIG-VECDPDSTEEVD------HTVFEPSIVCHWGLIYKTS 381

Query: 447 QQFDIRGSVEEF 458
              DI    E+F
Sbjct: 382 THIDISSLGEDF 393


>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
          Length = 519

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 227/471 (48%), Gaps = 53/471 (11%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           Q+ +   +  A     D  R++ L  F+   G+  S EE+ KR+ V+  + +I   W K 
Sbjct: 62  QHLIICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAK- 120

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
             R+     +   +  A + TFGSY LG +GP +DIDA+CVGP   S +  FF +L  +L
Sbjct: 121 --RVAYDQREQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQML 178

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
            E  EV++L  + +A                           + +   D  +L  V+EP+
Sbjct: 179 EERPEVSDLHSIENA---------------------------KAIHAFDPRLLAAVNEPS 211

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
            R L+G RV  QI++L+PN++ F   LRCLK WA++RG++ ++ GF  G++ A+L A VC
Sbjct: 212 WRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVC 271

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
            ++P+A  S L + FF +++ W WP PV L  +D+         P   R      MPI+ 
Sbjct: 272 IMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ---------PTPWRPHCCSFMPIVM 320

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           P  P    + +++ ST   + ++ Q G  + +        W+ LF P+ +   Y+++L++
Sbjct: 321 PCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRI 380

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMG 434
            + A  A++L  W GWV+SR R L L +E  + G + C P P E  D S    +  FF G
Sbjct: 381 VLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWG 437

Query: 435 LQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
           L  +           E   +    DI G  +     I M + W   +  CV
Sbjct: 438 LMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 488


>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
          Length = 244

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/207 (54%), Positives = 151/207 (72%), Gaps = 2/207 (0%)

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQ 144
           ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   ++ L   EEV +L+
Sbjct: 18  VIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLR 76

Query: 145 PVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVA 204
            V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++D   +RSLNGCRV 
Sbjct: 77  AVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVT 136

Query: 205 DQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 264
           D+IL LVPN+++F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR CQLYPNA+ S 
Sbjct: 137 DEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIAST 196

Query: 265 LVSRFFRVYTMWRW-PNPVMLCAIDEA 290
           LV +FF V++ W+W P PV+L   D++
Sbjct: 197 LVHKFFLVFSKWQWHPTPVLLVKPDKS 223


>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
          Length = 519

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 226/471 (47%), Gaps = 53/471 (11%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           Q+ +   +  A     D  R++ L  F+   G+  S EE+ KR+ V+  + +I   W K 
Sbjct: 62  QHLIICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAK- 120

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
             R+     +   +  A + TFGSY LG +GP +DIDA+CVGP   S +  FF +L  +L
Sbjct: 121 --RVAYDQREQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQML 178

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
            E  EV++L  + +A                           + +   D  +L  V+EP+
Sbjct: 179 EERPEVSDLHSIENA---------------------------KAIHAFDPRLLAVVNEPS 211

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
            R L+G RV  QI++L+PN++ F   LRCLK WA++RG++ ++ GF  G++ A+L A VC
Sbjct: 212 WRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVC 271

Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
            ++P+A  S L + FF +++ W WP PV L   D+         P   R      MPI+ 
Sbjct: 272 IMHPHATLSSLFNSFFDIFSHWHWPLPVSL--FDQ---------PTPWRPHCCSFMPIVM 320

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           P  P    + +++ ST   + ++ Q G  + +        W+ LF P+ +   Y+++L++
Sbjct: 321 PCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRI 380

Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMG 434
            + A  A++L  W GWV+SR R L L +E  + G + C P P E  D S    +  FF G
Sbjct: 381 VLSAPVAEELRDWVGWVKSRFRNLLLKLE--SIG-VDCDPDPSEQADHSMIEPNVVFFWG 437

Query: 435 LQRKPG---------EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
           L  +           E   +    DI G  +     I M + W   +  CV
Sbjct: 438 LMYRTSTNICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIVWPTHLPKCV 488


>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
 gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
          Length = 990

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 169/263 (64%), Gaps = 1/263 (0%)

Query: 59  QVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPS 118
           QVL ++  +   WVK + R R  S++ +      +F  GSYRLG+  P +DIDA+CV P 
Sbjct: 448 QVLKQLSDLLTKWVKRVGRERELSEEHITLTKGSLFLAGSYRLGLDDPNSDIDAVCVAPW 507

Query: 119 YVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRED 178
           +V+  +DFF     +LA+   V+ L PV  A+VP++   F G+ +DLL++ +    V  +
Sbjct: 508 HVT-HDDFFGSFCQLLAQTPGVSHLAPVRSAYVPLISLSFLGVRMDLLFSRLPMSSVESN 566

Query: 179 LDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVT 238
            +I    +L  V E ++++LN  RV+  +L LVP    +   LR ++ WA+RRG+YS   
Sbjct: 567 QNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKL 626

Query: 239 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWD 298
           G+LGG++WA+LVA VCQLYPNA P+ +  RFF+V + W+WP PVML  I +A LGF +WD
Sbjct: 627 GYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWD 686

Query: 299 PRKNRRDKTHHMPIITPAYPCMN 321
           PR++  D++H MPIITPAYP MN
Sbjct: 687 PRQSVFDRSHIMPIITPAYPHMN 709


>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
          Length = 255

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/237 (45%), Positives = 151/237 (63%), Gaps = 1/237 (0%)

Query: 8   SSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
           S  PP KQ G+T  IS+A P   D+QR  EL   L    ++ES++E   R ++L ++  +
Sbjct: 20  SGGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTL 79

Query: 68  AKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFF 127
            K WVKE++  +   +   E     I+TFGSYRLGVH  GADIDALCV P  + R  D+F
Sbjct: 80  VKQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYF 138

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL 187
                +L +  EVTE + V +A VPV+K  FDG+ IDLL+A +S   + +D D+ D ++L
Sbjct: 139 QSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLL 198

Query: 188 NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
            ++D  +VRSLNGCRV D+IL LVPN+E+F   LR +K WAK+ G+YSN  G+ GGV
Sbjct: 199 RNLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255


>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
           CCMP2712]
          Length = 336

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/319 (37%), Positives = 174/319 (54%), Gaps = 7/319 (2%)

Query: 111 DALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASI 170
           DA+ +   Y+ R  D F  L+  +   E++ +L  V +A  PV+KF+ D     L  A +
Sbjct: 1   DAVMIVTRYIDRS-DMFDDLYVAMQAREDIKDLIKVQEARAPVIKFRMDDFEFKLSMARL 59

Query: 171 SRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKR 230
           +   + ED D++D   L +VD  +V SLN  RV D I  LVPN+  F   ++ LKFWAK+
Sbjct: 60  NYATLPEDFDVTDDKHLKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKK 119

Query: 231 RGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--D 288
           RGVY+N  GFLG ++  ++ AR+CQLYP A+PS L+  FF  Y  W+WP PV L  I  +
Sbjct: 120 RGVYNNGLGFLGSISLEIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVAN 179

Query: 289 EAELGFSVWD-PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE 347
             +L   VW        D+ H MPII+P YP  N++  VS STL++M + F     +C++
Sbjct: 180 SHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQ 239

Query: 348 VELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER--D 405
           +   KA W  LFEP   F +Y N+LQ+   A +  D   WKG+  + +  +   +ER  D
Sbjct: 240 IHEGKAGWCDLFEPVDLFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLERCPD 299

Query: 406 TYGKLQCHPYPHEYVDTSK 424
            Y   + HP    Y    K
Sbjct: 300 AYLD-RAHPIQRSYAKPRK 317


>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
          Length = 430

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 110/277 (39%), Positives = 161/277 (58%), Gaps = 8/277 (2%)

Query: 239 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWD 298
           GFLGGV+WA+LVAR CQLYPNA  S LV +FF V++ W WPNPV+L   +E+ L   VWD
Sbjct: 3   GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62

Query: 299 PRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL 358
           PR N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L
Sbjct: 63  PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKL 122

Query: 359 FEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHE 418
            EP  FF+ YR+Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  
Sbjct: 123 LEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQS 181

Query: 419 YVDTSKPCAH----CAFFMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG 471
           +    +          +F+G+   + +  E V     +DI+   +      N     K G
Sbjct: 182 FPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEG 241

Query: 472 MEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSS 508
           M+I  +H+++KQ+  Y+  E  ++ +   L+   RSS
Sbjct: 242 MKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSS 278


>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
          Length = 360

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 99/216 (45%), Positives = 142/216 (65%), Gaps = 6/216 (2%)

Query: 210 LVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRF 269
           LVP    F   LRC+K WA++R VY N+ GF GGV WA+LVAR+CQLYPNAV S++V +F
Sbjct: 1   LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60

Query: 270 FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 329
           F +YT W WP PV+L +I++  L   VW+PR    D+ H MP+ITPAYP M +++N+++S
Sbjct: 61  FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120

Query: 330 TLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA---NADDLLA 386
           T +V++ +   G++I +++   K  WS LFE + FF  Y+ YL V  VAA   +A++   
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCV--VAATIDSAEEHKK 178

Query: 387 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
           W G++ES+LRQL L +E    G    HPY  ++  T
Sbjct: 179 WSGFIESKLRQLVLKLEVAE-GVEIAHPYVKDFSHT 213


>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
 gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
          Length = 343

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 202/380 (53%), Gaps = 61/380 (16%)

Query: 158 FDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHF 217
           + G+ +D+L+A + +  + E++D+SD S+L ++DE ++RSLNG RVA+Q+LKLVPN + F
Sbjct: 3   YSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTF 62

Query: 218 CTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR 277
           C +LR +K WAK  GVYSN  GF GG+ WA+LVA+ CQLYPNA PS ++ + F V++ W+
Sbjct: 63  CQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWK 122

Query: 278 WPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQ 337
           WP+PV+L                                + C++S      STL ++ ++
Sbjct: 123 WPSPVVL------------------------------KQFGCVDSKLANLKSTLHIIQEE 152

Query: 338 FQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQ 397
            +    IC++++   A W+ LFE   FF  Y++++ + I   N D  +   G+ ES++RQ
Sbjct: 153 MKSALEICDQIQKGNATWNDLFEEINFFSRYKHFVALTI---NEDTNI---GFFESKIRQ 206

Query: 398 LTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEE 457
           L  +IER++  K   H  P +  +         +F+GL     E  +  +  D+   +E 
Sbjct: 207 LVQIIERNSQVK-TAHINPRKLKNIRN---ESTWFLGL-----EFTENAKNLDLTSEIEG 257

Query: 458 FKLSINMYMFWKPG----MEICVSHIRRKQIPPYVFPEGYKRTRHPR---LASQQRSSEN 510
           FK   NM      G    +++  ++++R  +  ++     KR R  +    A+++R + +
Sbjct: 258 FKR--NMARQQSKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFVKSKTAANRKRPASS 315

Query: 511 GNEYQTGSGLKRKKDPESVD 530
           G+  +T       K P  +D
Sbjct: 316 GDSTET-------KKPRVID 328


>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 1230

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/409 (33%), Positives = 216/409 (52%), Gaps = 49/409 (11%)

Query: 38   LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
            L ++LV    Y+  ++ ++R+  +  + Q  K+ ++     + Y+ Q+  +   L+   G
Sbjct: 731  LYRYLVANKSYDLDQQRKQRQAAVRLVSQACKEVIE-----KNYNGQVNCEVLHLL---G 782

Query: 98   SYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFK 157
            S ++GV    +D+DALCVGP  +S    FF  L   L + +++   + V DA VPV+K +
Sbjct: 783  SCQMGVQTADSDVDALCVGPDTMSCSR-FFMELRVALEKTKKLQSAREVHDAKVPVLKLQ 841

Query: 158  FDGLSIDLLYASI-SRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEH 216
             +G+ +DLLY    S + +     I D S L   +   +RS++GCR  D IL+ VPNV H
Sbjct: 842  INGVEVDLLYGPYPSSVPITPPSQIDDRS-LRKFEPAVLRSISGCRDGDAILRSVPNVSH 900

Query: 217  FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC---QLYPNAVPSM--------- 264
            F T LR +K WAKRRG+YSN  GFLGG +W++LVA VC   +LY  +  +          
Sbjct: 901  FQTVLRAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIE 960

Query: 265  --LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 322
              L++ FF VY  W W  PV +        G + + P      K+  MPI+TP  P  NS
Sbjct: 961  ERLLAEFFEVYNHWDWQQPVAITP------GSARYKPGH----KSDKMPIVTPTPPFNNS 1010

Query: 323  SYNVSTSTLRVMMDQFQYGNTICEEVELN-KAQWSALFEPYLFFESYRNYLQVDIVAANA 381
            + NV+ STL  M  +F     I +  + N +A  + L +P  FF+ Y  YL V++ + ++
Sbjct: 1011 ARNVARSTLTEMQQEFFRAFDITQASQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSS 1070

Query: 382  DDLLAWK-------GWVESRLRQLTLMIERD--TYGKLQCHPYPHEYVD 421
            D++  W        GW+ESRL  L   +E++  TY +    P+P  +V+
Sbjct: 1071 DEVTKWPTNFSLSLGWLESRLIALIFDLEKNPQTYAR----PFPGTFVN 1115


>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
          Length = 167

 Score =  206 bits (525), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 91/167 (54%), Positives = 119/167 (71%)

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VPV+K  FD + ID+L+A ++   + E+LD+ D  +L ++D   +RSLNGCRV D+IL
Sbjct: 1   AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 268
            LVPN+E+F  TLR +K WAKR  +YSN+ GFLGGV+WA+LVAR CQLYPNAV S LV +
Sbjct: 61  HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120

Query: 269 FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
           FF V++ W WPNPV+L   ++  L   VW PR    D+ H MPIITP
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167


>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
           sativa Japonica Group]
          Length = 550

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 231/502 (46%), Gaps = 84/502 (16%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           Q+ +   +  A     D  R++ L  F+   G+  S EE+ KR+ V+  + +I   W K 
Sbjct: 62  QHLIICGLDPAAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAK- 120

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLG-----------------------VHGPGADID 111
             R+     +   +  A + TFGSY LG                        +GP +DID
Sbjct: 121 --RVAYDQREQYWNTTATVLTFGSYALGEFPFEIFNISYCDKRCLKCSALKAYGPESDID 178

Query: 112 ALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASIS 171
           A+CVGP   S +  FF +L  +L E  EV++L  + +A                      
Sbjct: 179 AVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENA---------------------- 216

Query: 172 RLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRR 231
                + +   D  +L  V+EP+ R L+G RV  QI++L+PN++ F   LRCLK WA++R
Sbjct: 217 -----KAIHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKR 271

Query: 232 GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE 291
           G++ ++ GF  G++ A+L A VC ++P+A  S L + FF +++ W WP PV L  +D+  
Sbjct: 272 GLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQ-- 327

Query: 292 LGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNT-----IC- 345
                  P   R      MPI+ P  P    + +++ ST   + ++ Q G       +C 
Sbjct: 328 -------PTPWRPHCCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCT 380

Query: 346 -EEVELN-KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
            E+ + N    W+ LF P+ +   Y+++L++ + A  A++L  W GWV+SR R L L +E
Sbjct: 381 VEQGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLE 440

Query: 404 RDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG---------EVVQEGQQFDIRGS 454
             + G + C P P E  D S    +  FF GL  +           E   +    DI G 
Sbjct: 441 --SIG-VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNICIDSVKEDFMKSVTNDIYGK 497

Query: 455 VEEFKLSINMYMFWKPGMEICV 476
            +     I M + W   +  CV
Sbjct: 498 EKCTHSDITMSIVWPTHLPKCV 519


>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
          Length = 1051

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 266/543 (48%), Gaps = 110/543 (20%)

Query: 22   ISMAGPTEA-DMQRNRELEKFLVEAGLYESK-EEDEKREQVLGRIR-QIAKDWVKELTRL 78
            I++   TE  D+  +  L +FL E   ++S+  E+ +   +   ++ Q AK  +K  T L
Sbjct: 507  INIKKTTEVIDLPNHNNLSQFLDEKSEFQSQISENSESNNICNALKAQSAKTNIKNNTNL 566

Query: 79   RGYSDQ-----MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
              Y ++     M +D+N +     SY   ++   +D+    +G  +  +++       N+
Sbjct: 567  --YDEKLKNISMEKDSNEI-----SYPEVINTKKSDVK---LGQEHTDKDK-------NL 609

Query: 134  LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
            ++ ++ +T L  + DA+VP++KF+ + +SIDLL+  +    +     + D  + N +D+ 
Sbjct: 610  ISGIK-ITNLHKIEDAYVPLIKFEINYISIDLLFTRVPLPSLSNLNLLDDTLLKN-MDDK 667

Query: 194  TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
            ++ S+NG RV D ++ LVPNV+ F + LR +K+WAKRRG+Y N  G+ GGV +A+LVAR+
Sbjct: 668  SILSINGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAILVARI 727

Query: 254  CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
            CQ YPN     ++ +FF +Y+ W+WPNPV+L    +      +WDP+ ++ D+ H MPII
Sbjct: 728  CQYYPNKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPII 787

Query: 314  TPAYPCMNSSYNVSTST-------LRVMMDQFQ--------------YGN---------- 342
            TPAYP + S++NV+ +T       L+  +D F+              +G+          
Sbjct: 788  TPAYPSICSTHNVTNTTLGVINEELKRCLDIFKESKNIDSSFDETKIFGHESDINCASKQ 847

Query: 343  ---------TICEEVELN---KAQW---------------------SALFEPYLFFESYR 369
                      I E+ E N   K +W                       LF+   FF+ Y+
Sbjct: 848  SIDPKSKKLKIGEDHENNINTKVKWDLNNLSFDNLKVFYEKFYGLLKKLFQQSDFFKKYK 907

Query: 370  NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD---TYG-KLQCHPYPHEYVDTSKP 425
             YL + +     DD   WKG++ES++R L   +E     + G  ++  P+P  +V     
Sbjct: 908  FYLNIKLTN---DD--KWKGFIESKIRLLCAKLENSEGFSIGYMIKAVPFPQSFVYND-- 960

Query: 426  CAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIP 485
                 FF+GL  K      +  + +I   V +F   +N +     G EI +   ++K+I 
Sbjct: 961  --FVHFFVGLDYK------DRIKINIDKPVNDFLRILNDWDKKDEGSEISIKINKKKEIG 1012

Query: 486  PYV 488
             ++
Sbjct: 1013 EFL 1015



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 20/136 (14%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K +G+T P+SM+G    DM +++ +  FLV++  +E+ ++   RE+VLG +  +A  + K
Sbjct: 5   KTHGITGPLSMSGSKLIDMYKSQIINDFLVKSNFFEAHQDSVSRERVLGYLSFLADKFCK 64

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE---DFFFIL 130
                              IFTFGSYRLGVH  GADID L V  S V+  +    FF +L
Sbjct: 65  -----------------GKIFTFGSYRLGVHQKGADIDTLLVSASDVTLIDFFNGFFEML 107

Query: 131 HNILAEMEEVTELQPV 146
              +A+ ++++   PV
Sbjct: 108 KEYVADEKDISLENPV 123


>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
           thermophila]
 gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 707

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 244/473 (51%), Gaps = 38/473 (8%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           MS+  P  + G    +S   P E D Q +  +++ +++   Y   E+++ +EQ++ +I++
Sbjct: 124 MSNIDPRAEPGYI--LSQEYPQEQDYQESSYIKQ-MIDKYFYHP-EKEKLKEQIIMKIQE 179

Query: 67  IAKDWVKELT-RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           I   W+  +    R   +Q+     A +  FGSY LGV     D+D +C+ P++V R + 
Sbjct: 180 IVNQWMVNININERKIPEQVAHMQLARVLPFGSYFLGVSSVDGDVDLVCIAPNFVDRFKH 239

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD--ISD 183
           F   L+++++ M+ V     V+DA VP+M+F+  G+ ID+ +A +    + +D+D  I D
Sbjct: 240 FNGQLYDMISNMDGVEYHNNVIDAKVPIMQFEIQGVPIDISFAQLDVETLPDDIDKQIPD 299

Query: 184 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEH----------FCTTLRCLKFWAKRRGV 233
            + L  +DE    S+NG R    I++ V   EH          F  +L+ +K WA+  G+
Sbjct: 300 -THLTMMDERDKLSINGYRCNQAIIRYV--TEHSEDKQQSKQRFQESLKVIKIWARNNGI 356

Query: 234 YSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELG 293
           Y N  G+LGG++WALL+A++CQ++PN   + ++ +FF  Y+ W+WP   +L         
Sbjct: 357 YENRLGYLGGISWALLLAKICQMFPNLEVNGIIEQFFLQYSSWKWPTMEVLLG------P 410

Query: 294 FSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTIC-EEVELNK 352
           FS   P + ++++   M I TPAYP  NS+  V    L ++  + +  N I  EE++  +
Sbjct: 411 FS--QPEERQKNQKFEMSIYTPAYPEYNSTERVKKINLEIIDYKIKEANRIIQEEIKTGQ 468

Query: 353 AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRL--RQLTL--MIERDTYG 408
           A W  L +   F   Y  ++++D++    D+ +      + +L  + LTL     +    
Sbjct: 469 APWDRLIQEEDFLNKYTKFIEIDLIRIERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQ 528

Query: 409 KLQCHPYPHEYVDTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKL 460
           +L+  P+P  Y    +    C AF +G++ K    +QE  ++  +  ++EF +
Sbjct: 529 ELEIRPWPFFYKKKDQKYPQCSAFLIGIKAKSH--IQE--EYSFKNCIQEFAM 577


>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
 gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
          Length = 447

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 203/432 (46%), Gaps = 71/432 (16%)

Query: 28  TEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMV- 86
            + D +R   L +FL + G   S E D+KREQV+ ++ +I  DW K +     Y  ++  
Sbjct: 57  AQMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVV----AYEQRVPP 112

Query: 87  EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPV 146
             A A + T+GSY LG HGP +DIDALCVGP   + +  FF +L  IL +  EV+ELQ V
Sbjct: 113 RRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTV 172

Query: 147 LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
             A   +                            S+  +L  +D  + RSL+G RV +Q
Sbjct: 173 ESAKAIIT---------------------------SNPHLLQKLDSLSWRSLSGVRVNEQ 205

Query: 207 ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLV 266
           I++LVPN + F   LRC+K WAKRRG++ ++ GF  G++ A+L A VCQ YP        
Sbjct: 206 IVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYG------ 259

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
                               I+ +  G     P   RR     MPI+ P  P    + N+
Sbjct: 260 -------------------TINVSLHG----QPTNCRRPDGSFMPILLPCTPPEFCTSNM 296

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLA 386
           +  T + + ++   G  + +E   +  +W  LF P+ +   Y  +L++ + A  +++L  
Sbjct: 297 TKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRD 356

Query: 387 WKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEG 446
           W GWV+SR     L+++ ++ G ++C P   E VD      H  F   +    G + +  
Sbjct: 357 WAGWVKSR---FNLILKLESIG-VECDPDSTEEVD------HTVFEPSIVCHWGLIYKTS 406

Query: 447 QQFDIRGSVEEF 458
              DI    E+F
Sbjct: 407 THIDISSLGEDF 418


>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
          Length = 388

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/166 (56%), Positives = 125/166 (75%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           +GVT+PIS++GPTE  + +  E+EK+L +A LYE ++E   RE+VLG++ Q  K W+K+ 
Sbjct: 148 HGVTEPISLSGPTEKYLMQTDEVEKYLSDARLYERQDEAILREEVLGKLDQTVKAWIKKA 207

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
           TR+ GY +Q V +ANA  FTFGSY LGVHGP ADID LCVGP + +R E FF  LH+ILA
Sbjct: 208 TRINGYGEQFVHEANAKTFTFGSYCLGVHGPDADIDTLCVGPRHATRNEYFFRWLHDILA 267

Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDI 181
           EM EV+EL PV DAHVPV+ FK +G+SIDLLYA+++  V+ E  +I
Sbjct: 268 EMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPESREI 313


>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
          Length = 550

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 228/436 (52%), Gaps = 24/436 (5%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           +L  F+    L   +E  +K + +   + QI K W ++  + +  ++  ++  +A++  +
Sbjct: 49  QLLSFIETDSLQAIEENQQKSKDIQAYLGQIVKRWSQQCAKEKRINEDHLKYCSAVLLPY 108

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKF 156
           GS  LGV    +DID +C+ P ++ R E FF  L  +L+  + + ++  +     P++K 
Sbjct: 109 GSVLLGVADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKIESTSNPIIKM 168

Query: 157 KFDGLSIDLLYASISRLVVREDLDISDMSVLNDV---DEPTVRSLNGCRVADQILKLVPN 213
            + G  ID+ +A ++   V E++D +   +  ++   ++ ++ +LNG +    I K +P+
Sbjct: 169 IYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSMYALNGRKNGILISKSMPD 228

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVY 273
              F   LR +K WAK+R V SN+ G+LGG++WA+L+A++CQL+P       VS FF++Y
Sbjct: 229 HSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDLCQTVSLFFQIY 288

Query: 274 TMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRV 333
           + W W  PV++   ++  + + + D  K R DK   M IITPAYP  N+++ V   T + 
Sbjct: 289 SQWNWKVPVVIDESEQEIICYYLQDEDK-RNDKI--MQIITPAYPFFNTTFKVHKITFQT 345

Query: 334 MMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVES 393
           +  +FQ G             W+ +  P+ FF+ ++ ++ + IV+  +++   W G+ E+
Sbjct: 346 IFQEFQIGAQ-------KLGDWNEVLRPFDFFDCFQYFVALSIVSKTSENFHKWTGFCEA 398

Query: 394 RLRQLTLMI--ERDTYG----KLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQ 447
           +L +L  ++    + Y     +L+  P   E ++         +F+G+++    + QE  
Sbjct: 399 QLPKLLKLVGNNEEVYDTKSFELRITPEGEENLERDH-AKSLTYFLGIKK----LKQEAW 453

Query: 448 QFDIRGSVEEFKLSIN 463
              +R  + +F + +N
Sbjct: 454 PLFLRLPITQFAIELN 469


>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
          Length = 493

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 189/350 (54%), Gaps = 12/350 (3%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
           L + L +   YE +    +R +V+ R+    + W+  +   +G  + +       +  FG
Sbjct: 38  LRQLLYQQKQYECERRVSERHEVINRMLSFLRAWLFSMMESKGLREALNSMPTFRLRQFG 97

Query: 98  SYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM-EEVTELQPVLDAHVPVMKF 156
           S RLGV    +DID   V P +V+REE FF     +L +   E+T+L  +  A+VPV++ 
Sbjct: 98  SLRLGVQDFYSDIDLCFVAPRWVTREE-FFTGFPRMLEQYSHEITKLSVLPSAYVPVIRA 156

Query: 157 KFDGLSIDLLYASISRLVVREDLDI----SDMSVLNDVDEPTVRSLNGCRVADQILKLVP 212
               + +D+++A      +  +LD+    +  S+++D+    VRSLNG RV + +L+ VP
Sbjct: 157 TCHDIQVDIVFARTEVDEISRELDLLAGANIESLISDIR--CVRSLNGYRVTEMVLRFVP 214

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRV 272
               F   L+ +++WAK + +YS+  G+LGGV+WA+LVA+VC ++P A  + ++++FF V
Sbjct: 215 RYRVFQLALKAIRYWAKCQKIYSHTLGYLGGVSWAILVAKVCTMFPKAGAARILNKFFLV 274

Query: 273 YTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 332
            + WRWP PVML   +   +   +W   +   D    MPIITP YP  NSS+NVS STL 
Sbjct: 275 MSQWRWPEPVMLLP-EGYGVSSQLWSITQMPWDI---MPIITPVYPQQNSSFNVSKSTLL 330

Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD 382
           VM +    G  I +++ + +  W + F P    + Y +Y+ +       D
Sbjct: 331 VMKNALTEGVRITDDILMERCDWKSFFHPVHIADMYEHYVVLQTFRYTTD 380


>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
 gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
 gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
          Length = 482

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 154/257 (59%), Gaps = 5/257 (1%)

Query: 28  TEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVE 87
            E D +R+  L +FL + G   S E++ KRE+V+  +++I   W   +   +     +  
Sbjct: 75  AEVDHRRSSSLVQFLKDEGAVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL-- 132

Query: 88  DANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVL 147
            A A + T+GSY LG HGP +DID LC+GP   + +  FF +L  IL    EV+E+  V 
Sbjct: 133 -ATATVLTYGSYTLGAHGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVE 191

Query: 148 DAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQI 207
            A VP+M+F+F G+++DL YA +  +   + ++     +L  +D  + RSL+G RV +QI
Sbjct: 192 KAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQI 251

Query: 208 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 267
           ++LVPN E F T LRC+K WA++RG++ +  GF  G++ A+L A VC+ +P+A  S L +
Sbjct: 252 VQLVPNAEKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFA 311

Query: 268 RFFRVYTMWRW--PNPV 282
            FF+ +  W W  P+P+
Sbjct: 312 VFFQTFAHWPWQVPDPL 328


>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
          Length = 370

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/275 (38%), Positives = 161/275 (58%), Gaps = 7/275 (2%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQ----RNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           PP     +  PI +A P E  M     R+R L KF+  AG+  S E++ +RE+V+  + +
Sbjct: 45  PPTTGALLPLPIPVALPHEVIMYMDECRSRSLLKFISNAGIEPSLEDERRRERVVRELGK 104

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           I  DW + +   +G    +    +A + TFGSY LG +GP +DID LC+GP   S +  F
Sbjct: 105 IVMDWARRVAYEQGKQHWI---TSATVLTFGSYALGAYGPESDIDVLCIGPYIASLQHHF 161

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSV 186
           F +L  +L    EV+EL  +  A VP+M+FKF+G+ +D  Y  +  +   E +   D  V
Sbjct: 162 FVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHV 221

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L +VD P+ R L+G R   QI++LVPN++ F   LRCLK WA++RG+  ++ GF  G++ 
Sbjct: 222 LENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHL 281

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
           A+L A VC+ +PNA  + L+S FF ++  W WP P
Sbjct: 282 AILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLP 316


>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
 gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
          Length = 386

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/253 (45%), Positives = 150/253 (59%), Gaps = 53/253 (20%)

Query: 343 TICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI 402
           T  +E+ELNKAQWSALFEPYLFFE+Y+NYLQVDIVAA+A DLLAWKGWVESRLRQLT   
Sbjct: 27  TTTKEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLT--- 83

Query: 403 ERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 462
                                           L+RK G   QEGQQFDIR +V+EF+  I
Sbjct: 84  --------------------------------LKRKEGVTGQEGQQFDIRETVDEFRQDI 111

Query: 463 NMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ--RSSENGNEYQTGSG- 519
           NMY+ WK GM+I VSH+RR+Q+P +VFP+GYKR+R  R  +QQ  R+SE+    Q+GS  
Sbjct: 112 NMYLPWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAE 171

Query: 520 --LKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLN 577
             +KRK D E  +         + P    S+SP   A  S  +   S+ E VI  +  + 
Sbjct: 172 RHVKRKNDCEMAN---------LKP----SVSPSSSAGRSGVTSLASSCEGVILGRPTIG 218

Query: 578 QEIAEGGDVSNSS 590
             ++   DV+++S
Sbjct: 219 DIVSNCEDVASNS 231


>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
 gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
          Length = 274

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 155/272 (56%), Gaps = 22/272 (8%)

Query: 124 EDFFFILHNI-LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
            D FF L  + L+E+ +VT L PV  A VPV+K KF G+ +D+LY  ++  +    +D +
Sbjct: 3   RDAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPA 62

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           D ++L  +DE + RS+NG RV+D I   VP+  HF   LR ++ WA+RRG+YSN  G+LG
Sbjct: 63  DDNLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLG 122

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GF---S 295
           GV+WA+LVARVCQL+PN  PS LV RFFRVY+ W W        +  +E     GF    
Sbjct: 123 GVSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHK 182

Query: 296 VWDPRKNRRDKTHHMP-------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE- 347
           VW P   R      +P       +ITPAYP MNS++ V+  ++  +  + + G  I    
Sbjct: 183 VWCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSK 242

Query: 348 -VELNKAQ-WSALFEPYLFFE----SYRNYLQ 373
            V+L   + W  L EP  FF+     Y+ +LQ
Sbjct: 243 GVDLRSRECWETLLEPIHFFDYDQGGYKQFLQ 274


>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
           hominis]
          Length = 696

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 191/372 (51%), Gaps = 48/372 (12%)

Query: 152 PVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLV 211
           P +  K   + IDL++A ++   +   L++ D S+L ++DE +V SLNG RV D+IL LV
Sbjct: 316 PGLNKKMVEIKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLV 375

Query: 212 PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 271
           PN   F   LRC+K+WAKRR +  ++ G+ GGV +A+ VAR+CQL+PN     ++ ++F 
Sbjct: 376 PNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFE 435

Query: 272 VYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTL 331
           +Y  W+WP PVML  I+       VWDP+ +  DK H MP+ITP+YP M S++N+  ST+
Sbjct: 436 LYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIMNSTM 495

Query: 332 RVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANA-----DDLLA 386
           +   ++ +  + +  E     A+W+  F    FF+ YR++L V I+  NA     +D  +
Sbjct: 496 KRYKEELERAHKLLVE----GAEWNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNNDARS 551

Query: 387 --------------------WKGWVESRLRQLTLMIER--------------DTYGKLQC 412
                               W+G V SR+R L+  +E               D  G L  
Sbjct: 552 EQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLETVEQLDSAPPFPQTFDMCGFLGL 611

Query: 413 HPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM 472
           HP    ++  +  C+    F+ L     + +   + F I   +EEFK  +  +      M
Sbjct: 612 HPLA--FIPKNALCSLT--FIALDMADSKQLLRKKVF-IDAPIEEFKEMVFDWDKRTEDM 666

Query: 473 EICVSHIRRKQI 484
           ++ +  ++RK +
Sbjct: 667 DLVMRAMKRKDV 678



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 9/151 (5%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  K++G+T P+S+   ++ D+ R   L  FLV + +Y++ EE   RE+VLGR+  +  +
Sbjct: 4   PHSKKHGITGPLSLKESSQDDIARTSSLHAFLVSSKIYDTDEEAIIRERVLGRLSYMFDN 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSRE---EDFF 127
           ++K +   +G +D  +  A   I+TFGSYRLGVH  G+DID LCV P YV R+   E+F+
Sbjct: 64  FIKAIGTKKGLADSDIRTATGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKEFFEEFY 123

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKF 158
            +L+++ AE+E+V       DA+VP+M+  +
Sbjct: 124 VMLNDVFAEVEKVE------DAYVPLMQLVY 148


>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
          Length = 428

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 169/354 (47%), Gaps = 66/354 (18%)

Query: 208 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 267
           LK+  N E    T R L  WA+RR +YSN+ GF GGV WA+LVARVCQLYP A  S++V 
Sbjct: 35  LKVQNNFESPAETERSL--WAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVG 92

Query: 268 RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVS 327
           +FFR+   W WP PV+L  I++  L   VW+P+    D+ H MPIITPAYP M +++NVS
Sbjct: 93  KFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVS 152

Query: 328 TSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLA 386
            ST  V++ + Q G  I +++ L + +W  LF  + FF + Y+ YL +   +   +    
Sbjct: 153 MSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESV 212

Query: 387 WKGWVESRLRQLTLMIERDTYGKLQCHPYPH----------------------------- 417
           W G VES++R L   ++R     +  HP+P                              
Sbjct: 213 WSGLVESKIRHLVGALDRKATIAI-AHPFPKGFERVHRVSSEEEIEAVKTGSTKYQDKGT 271

Query: 418 --EYVDTSKPCAHCA-----------------------------FFMGLQRKPGEVVQEG 446
             E  D  K  AH A                             +++GL+ KP E     
Sbjct: 272 KTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLE-PGAS 330

Query: 447 QQFDIRGSVEEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHP 499
           +  DI    + FK +   +  ++PG+ ++ ++H+R   +P  VF  G  R   P
Sbjct: 331 RSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRP 384


>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
          Length = 170

 Score =  190 bits (482), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 94/170 (55%), Positives = 125/170 (73%), Gaps = 1/170 (0%)

Query: 107 GADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLL 166
           GADIDALCV P +V R  DFF   +  L + EEV +L+ V +A VPV+K  FDG+ ID+L
Sbjct: 2   GADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60

Query: 167 YASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKF 226
           +A ++   + EDLD+ D S+L ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K 
Sbjct: 61  FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120

Query: 227 WAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           WAKR  +YSN+ GFLGGV+WA+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170


>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
          Length = 533

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 191/348 (54%), Gaps = 22/348 (6%)

Query: 66  QIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED 125
           +I K W ++  + +  ++  ++  +A++  +GS  LGV    +DID +C+ P ++ R E 
Sbjct: 54  KIVKKWSQQCAKEKRINEDHLKYCSAVLLPYGSVLLGVADSKSDIDLICIAPEFIDRREQ 113

Query: 126 FFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
           FF  L  +L+  + + ++  +     P++K  + G  ID+ +A ++   V E++D +   
Sbjct: 114 FFNGLFYLLSNEQGMEQINKIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLDE 173

Query: 186 VLNDV---DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           +  ++   ++ ++ +LNG +    I K +P+   F   LR +K WAK+R V SN+ G+LG
Sbjct: 174 LRRNLLQSEDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLG 233

Query: 243 GVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS------- 295
           G++WA+L+A++CQL+P       VS FF++Y+ W W  PV+   IDE+E  F        
Sbjct: 234 GISWAILMAKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVV---IDESEQDFIQIETFKT 290

Query: 296 -VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ 354
             W   +++R+    M IITPAYP  N+++ V+  T + +  +FQ G             
Sbjct: 291 LCWKRDEDKRN-DKIMQIITPAYPFFNTTFKVNKITFQTIFQEFQIGAQ-------KLGD 342

Query: 355 WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMI 402
           W+ +  P  FF+ ++ ++ + IV+ ++++   W G+ E++L +L  +I
Sbjct: 343 WNEVLRPLDFFDCFQYFVAISIVSKSSENFHKWTGFCEAQLPKLLKLI 390


>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
          Length = 560

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 152/267 (56%), Gaps = 30/267 (11%)

Query: 240 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEA-------EL 292
           FLGGV+WA+LVAR CQLYPNA P+ L+ +FF V+T W WP+PV+L   D+          
Sbjct: 50  FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109

Query: 293 GFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK 352
              VWDPR    D+ H MPIITPA+P  NS++NV+ ST +V+M++ + G  I  E+   K
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGK 169

Query: 353 AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 412
           A+WS LF+   FF  Y++++ +  VAAN +D L W G VES++R L   +ER+    L C
Sbjct: 170 AEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL-C 228

Query: 413 HPYPHEYVDTS---------KPCAHCAFFMGLQ-----RKPGEVVQEGQQF-DIRGSVEE 457
           H  P  +   S          PC    +F+G++     +K  ++  E QQF D      +
Sbjct: 229 HINPQHFTPISPLPIEISIENPCCQ-MWFIGMELNKQLKKNIDLTDEIQQFNDAVMRAAD 287

Query: 458 FKLSINMYMFWKPGMEICVSHIRRKQI 484
           F+   N+Y    PGM +  S++RR  +
Sbjct: 288 FQ---NVYC---PGMAVLPSYVRRADL 308


>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
          Length = 348

 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/170 (55%), Positives = 121/170 (71%), Gaps = 8/170 (4%)

Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 452
           SR RQLTL IERDT G L CHP P+EYVDT++   HCAFFMGLQR  G   QE QQFDIR
Sbjct: 1   SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60

Query: 453 GSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLAS--QQRSSEN 510
           G+V+EF+  +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY+R R  R  +    +S E+
Sbjct: 61  GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120

Query: 511 GNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQKQDSLSPDHLA 554
           G+   +GS +    KRK D E +D   + PEKR S+SPQ  D +SP++ A
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSA 170


>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
          Length = 708

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 139/217 (64%), Gaps = 4/217 (1%)

Query: 161 LSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTT 220
           + IDL++A ++   +   L++ D S+L ++DE +V SLNG RV D+IL LVPN + F   
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373

Query: 221 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN 280
           LRC+K+WAKRRG+  ++ G+ GGV +A+ VAR+CQL+PN     ++ ++F +Y  W+WP 
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433

Query: 281 PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
           PVML  I+       VWDP+ +  DK H MP+ITP+YP M S++N+  ST++   ++ + 
Sbjct: 434 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKEELER 493

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIV 377
           G+ +  E +    +W   F    FF+ Y+++L V I+
Sbjct: 494 GHRLLAEGK----EWKEFFRSTDFFQRYKSFLAVFIL 526



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 100/157 (63%), Gaps = 9/157 (5%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           P  K+YG+T P+S+    E D+ R+  L+ FL+ + +YE+ EE   RE+VLGR+  +  +
Sbjct: 4   PHSKKYGITGPLSVKESPEDDIARSSSLQAFLLSSKIYETNEEAITRERVLGRLSYMFDN 63

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSRE---EDFF 127
           ++K +   +G +D  ++ A+  I+TFGSYRLGVH  G+DID LCV P YV R+   E+F+
Sbjct: 64  FIKAIGTKKGLTDSDIKAASGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKEFFEEFY 123

Query: 128 FILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSID 164
            +L ++ AE+E+V       DA+VP+M+  +    ID
Sbjct: 124 SMLSDVFAEVEKVE------DAYVPLMQLVYREHRID 154


>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
 gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
 gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
          Length = 495

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 103/247 (41%), Positives = 143/247 (57%), Gaps = 14/247 (5%)

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ 
Sbjct: 1   MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ 
Sbjct: 61  HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 422
           Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D 
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD- 179

Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 477
            K      + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   
Sbjct: 180 -KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 236

Query: 478 HIRRKQI 484
           H++RKQ+
Sbjct: 237 HVKRKQL 243


>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
           boliviensis]
          Length = 495

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/247 (41%), Positives = 143/247 (57%), Gaps = 14/247 (5%)

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ 
Sbjct: 1   MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ 
Sbjct: 61  HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 422
           Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D 
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD- 179

Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 477
            K      + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   
Sbjct: 180 -KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 236

Query: 478 HIRRKQI 484
           H++RKQ+
Sbjct: 237 HVKRKQL 243


>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
          Length = 170

 Score =  188 bits (477), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 94/170 (55%), Positives = 124/170 (72%), Gaps = 1/170 (0%)

Query: 107 GADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLL 166
           GADIDALCV P +V R  DFF   +  L   EEV +L+ V +A VPV+K  FDG+ ID+L
Sbjct: 2   GADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60

Query: 167 YASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKF 226
           +A ++   + EDLD+ D S+L ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K 
Sbjct: 61  FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120

Query: 227 WAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           WAKR  +YSN+ GFLGGV+WA+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170


>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
          Length = 170

 Score =  187 bits (476), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 94/170 (55%), Positives = 124/170 (72%), Gaps = 1/170 (0%)

Query: 107 GADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLL 166
           GADIDALCV P +V R  DFF   +  L   EEV +L+ V +A VPV+K  FDG+ ID+L
Sbjct: 2   GADIDALCVAPRHVDRS-DFFTSXYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60

Query: 167 YASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKF 226
           +A ++   + EDLD+ D S+L ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K 
Sbjct: 61  FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120

Query: 227 WAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           WAKR  +YSN+ GFLGGV+WA+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170


>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
           AltName: Full=Polynucleotide adenylyltransferase alpha-B
 gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
          Length = 484

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/263 (39%), Positives = 150/263 (57%), Gaps = 18/263 (6%)

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
           +LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+ 
Sbjct: 1   MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60

Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
           H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L KA+WS LF+   FF+ 
Sbjct: 61  HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQK 120

Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 422
           Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  ++
Sbjct: 121 YKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPSPSE--NS 178

Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 477
            K      + +GL  K  E   E    D+   ++ F     + +IN  MF +  ++I   
Sbjct: 179 EKEEFRTMWVIGLVFKKME-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-ETEIKIAAM 236

Query: 478 HIRRKQ----IPPYVFPEGYKRT 496
           H++RKQ    +P +V P+  K +
Sbjct: 237 HVKRKQLHQLLPSHVLPKKKKHS 259


>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
          Length = 393

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 183/390 (46%), Gaps = 76/390 (19%)

Query: 219 TTLRCL--KFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           T L C     WA+RR +YSN+ GF GGV WA+LVARVCQLYP A  S++V +FFR+   W
Sbjct: 3   TGLLCAPSSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKW 62

Query: 277 RWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMD 336
            WP PV+L  I++  L   VW+P+    D+ H MPIITPAYP M +++NVS ST  V++ 
Sbjct: 63  AWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILR 122

Query: 337 QFQYGNTICEEVELNKAQWSALFEPYLFF-ESYRNYLQVDIVAANADDLLAWKGWVESRL 395
           + Q G  I +++ L + +W  LF  + FF + Y+ YL +   +   +    W G VES++
Sbjct: 123 ELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVESKI 182

Query: 396 RQLTLMIERDTYGKLQCHPYPH-------------------------------EYVDTSK 424
           R L   ++R     +  HP+P                                E  D  K
Sbjct: 183 RHLVGALDRKATIAI-AHPFPKGFERVHRVSSEEEIEAVKTGSTKYQDKGTKTETTDEMK 241

Query: 425 PCAHCA-----------------------------FFMGLQRKPGEVVQEGQQFDIRGSV 455
             AH A                             +++GL+ KP E     +  DI    
Sbjct: 242 DAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLELKPLE-PGASRSLDISTDA 300

Query: 456 EEFKLSINMYMFWKPGM-EICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEY 514
           + FK +   +  ++PG+ ++ ++H+R   +P  VF  G  R   P+    +++  +G   
Sbjct: 301 QIFKSTCTSWPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKKKIIKKAEISG--- 357

Query: 515 QTGSGLKRKKDPESVDQDGPEKRQSISPQK 544
                  +K++ ES+D    +K +    Q+
Sbjct: 358 -------QKRNIESLDVSARKKAKVAYEQR 380


>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
          Length = 352

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/248 (41%), Positives = 144/248 (58%), Gaps = 14/248 (5%)

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR N  D+
Sbjct: 1   AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
            H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+
Sbjct: 61  YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQ 120

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVD 421
            Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D
Sbjct: 121 KYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD 180

Query: 422 TSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICV 476
             K      + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I  
Sbjct: 181 --KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAA 236

Query: 477 SHIRRKQI 484
            H++RKQ+
Sbjct: 237 MHVKRKQL 244


>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
          Length = 497

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 143/249 (57%), Gaps = 16/249 (6%)

Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRK--NRRD 305
           +LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L   +E  L   VWDPR   N  D
Sbjct: 1   MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
           + H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF
Sbjct: 61  RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFF 120

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYV 420
           + Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  
Sbjct: 121 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 180

Query: 421 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEIC 475
           D  K      + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I 
Sbjct: 181 D--KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIA 236

Query: 476 VSHIRRKQI 484
             H++RKQ+
Sbjct: 237 AMHVKRKQL 245


>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
          Length = 170

 Score =  183 bits (464), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 92/170 (54%), Positives = 121/170 (71%), Gaps = 1/170 (0%)

Query: 107 GADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLL 166
           GADIDALCV P  V R  DFF   +      EEV +L+ V +A VPV+K  FDG+ ID+L
Sbjct: 2   GADIDALCVAPRXVDRS-DFFTSFYEKXKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60

Query: 167 YASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKF 226
           +A ++   + EDLD+ D S+L ++D   +RSLNGCRV D+IL LVPN+++F  TLR +K 
Sbjct: 61  FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120

Query: 227 WAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 276
           WAKR  +YSN+ GF GGV+WA+LVAR CQLYPNA+ S LV +FF V++ W
Sbjct: 121 WAKRHNIYSNILGFXGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170


>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
          Length = 482

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 208/411 (50%), Gaps = 20/411 (4%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           EL  +L + G+Y + EE ++RE+ +  + ++ + W K++   +  + +  +   A IFT+
Sbjct: 4   ELRGYLEKNGMYPTPEEKKEREKAISYLNEVVEKWGKKIYISKTGTSENTDVCAAKIFTY 63

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKF 156
           GSYRL V+G  ADIDA  V  S + R EDFF  L+  L    +V E++ +     P++  
Sbjct: 64  GSYRLDVYGNNADIDACVVTNSTIER-EDFFNDLYEDLKNNPDVREIRQIKSVRAPILTM 122

Query: 157 KFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP--NV 214
            +  + IDL +A  +   + +++DI    +L+++DE + R++NG R  D I   VP  +V
Sbjct: 123 TYMKIDIDLNFARTAHTTLPKEMDILSERILDEMDELSTRAINGRRNTDMINNFVPPHSV 182

Query: 215 EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYT 274
           E F   +R +K W+K+RG+Y  V  +L G++  +LVA+V           L+ +FF  Y 
Sbjct: 183 EAFKVIVRAIKMWSKKRGIYGYVYSYLNGISIEILVAQVISENYQLDNVRLLEKFFHAYA 242

Query: 275 MWRWP-NPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRV 333
            W W  NPVML           V D R  R+ K   + +ITPA P  NS YN++ S+L +
Sbjct: 243 TWDWARNPVML----------GVSDDRPERK-KEEMVQVITPAAPRENSMYNMTRSSLEL 291

Query: 334 MMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
           +  +   G  I +  +      W+ LF+    F  Y  +++   V  + + L    G  E
Sbjct: 292 LKREMLRGERIVKGYKSEGGNDWNLLFKKRHCFCGYYIFVEFS-VRGSLESLENKIGMFE 350

Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVV 443
           S++ +    +E +    ++ +  P  Y++      +  +++G+  K   +V
Sbjct: 351 SKIVRFVRSLE-EMEEVIEVNVIPEGYLEVENAVDY--YYVGMNVKKDLLV 398


>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 777

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/345 (33%), Positives = 165/345 (47%), Gaps = 48/345 (13%)

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNV--EHFCTTLRCLKFWAKRRGVYSNVTGF 240
           D S L D D   VRSLNG RV   +L LV  V  E F   L  +K WA+ +GVYSNV GF
Sbjct: 314 DDSDLCDQDPAGVRSLNGARVTQTLLDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGF 373

Query: 241 LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL-----GFS 295
            GGVNWA+LVA VC+ YP +  +  V  FF  +  W+WP PV L  +++A +     G +
Sbjct: 374 WGGVNWAILVAYVCRAYPESSIADTVQLFFETFANWKWPTPVSLIDLNDASITTPPPGAA 433

Query: 296 V---WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY-GNTICEEVELN 351
           V   W+P  + RD  H  PI+TPAYP MNSSYNV+   LR M +  QY  + I   V+ +
Sbjct: 434 VLPSWNPAIHIRDGLHVCPILTPAYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRS 493

Query: 352 ------------KAQWSALFE---PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 396
                       K  W  L+     ++F   +++Y+   I A   +  + W   VESRLR
Sbjct: 494 HTTYNRGVPVRRKIPWHRLWSLNAGWVF--RHQHYVHATIRAPQGEAFVTWFRLVESRLR 551

Query: 397 QLTLMIERDTYGKLQCHPYPH-EYVDTSKPCA---------HCAFFMGLQRKPGEVVQEG 446
            L   +E         H +PH  +   + P A            FF+GL+          
Sbjct: 552 VLISSLETP-----DSHAWPHGRFFYRNVPIAPYDELNGLREAHFFIGLR-----FASHV 601

Query: 447 QQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPE 491
              D+R    +F   +N ++     M++ + H+    +P +V  E
Sbjct: 602 DTADVRTLTLDFLRQVNGWIGRDSSMDLSLGHVTLPNLPRFVLDE 646



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 16/133 (12%)

Query: 52  EEDEKREQVLGRIRQIAKDWVKEL-----TRLRGYS-DQMVEDANALIFTFGSYRLGVHG 105
           +E+  R   +  + ++   W   L     T   G S DQ+       I  FGSYRLGVH 
Sbjct: 116 QEERVRRDAMDDLTRLLAQWAGTLAASVMTSTSGMSRDQL--SVYPTIVPFGSYRLGVHR 173

Query: 106 PG-ADIDALCVGPSYVSREEDFFFILHNILA-----EMEEVTELQPVLDAHVPVMKFKF- 158
           PG +D+D L + P + SR E FF     +L+          T++  +  A+ PV+K ++ 
Sbjct: 174 PGSSDLDVLVIAPPHCSRNE-FFTSFVELLSTPANGSQNTFTQIHAIPTAYTPVLKCQYA 232

Query: 159 DGLSIDLLYASIS 171
             L +D+L+ S++
Sbjct: 233 SSLPMDMLFVSVA 245


>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
 gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
          Length = 589

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 38/334 (11%)

Query: 104 HGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSI 163
           +GP +DID LC+GP   + +  FF +L  +L    EV+ELQ +  A VP+M+FKF+G+ +
Sbjct: 214 YGPESDIDVLCIGPYIATLQHHFFVVLRQMLEGRPEVSELQSIEGAKVPLMRFKFNGILV 273

Query: 164 DLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRC 223
           D  Y  +  +   E +   D  VL +VD P+ R L+G R   QI++LVPN++        
Sbjct: 274 DFPYVQLPFINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMK-------- 325

Query: 224 LKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVM 283
                        + GF  G++ A+L A VC+ +PNA  + L+S FF ++  W WP PV 
Sbjct: 326 -------------LLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPLPV- 371

Query: 284 LCAIDEAELGFSVWDPRKNRR--DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
                      S+ DP    R  D    MPI+ P  P    S + + ST   + ++ + G
Sbjct: 372 -----------SLLDPPVLCRGPDGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEELRRG 420

Query: 342 NTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM 401
             + ++       WS LF  + +   Y+ +L++ + A   ++L  W GWV+SR R L L 
Sbjct: 421 YALTKDTRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLK 480

Query: 402 IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
           +E  + G + C P   E VD +    +  FF GL
Sbjct: 481 LE--SLG-VYCDPDSSEQVDHTITEPNVVFFWGL 511



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 7/89 (7%)

Query: 18  VTKPISMAGPTEA----DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           +++PI MA P E     D  R+R L KF+ +AG+  S E++ +RE+V+  + +I  +W K
Sbjct: 52  LSRPIPMALPREVIVYMDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMEWAK 111

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLG 102
            +   +G    +    +A + TFGSY LG
Sbjct: 112 RVAYEQGKQHWI---TSATVLTFGSYALG 137


>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
          Length = 522

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 188/367 (51%), Gaps = 18/367 (4%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL-TRLRGYSDQMVEDANALIFT 95
           EL++FLV+  +Y   ++ EK+ + + ++ +  + W K++     G +D     A A I+ 
Sbjct: 4   ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKA-ATIYV 62

Query: 96  FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMK 155
           +GSYRL V+G  +DIDA  V  S ++R+ DF+  L+  L    +V EL+ +     P + 
Sbjct: 63  YGSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLS 121

Query: 156 FKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPN-- 213
             +  +  DL ++  +   + ++LDI + ++L ++DE   R++NG R  D I   VPN  
Sbjct: 122 MIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHS 181

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVY 273
            E F   +R +K W K+RG+Y  V  FL G++  +LVA+V           L+ +FF+VY
Sbjct: 182 EEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVY 241

Query: 274 TMWRW-PNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 332
           + W W   PVML   D+            N + K   + I+TPA P  N++++++  +L 
Sbjct: 242 SSWDWLRTPVMLGTNDDF-----------NDKKKEGIIQILTPASPSENAAFSITKFSLE 290

Query: 333 VMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 391
           ++  + + G  I  E        W+ LF+P   F  Y  +++  + +++ + L    G  
Sbjct: 291 MIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKF 350

Query: 392 ESRLRQL 398
           ES L  L
Sbjct: 351 ESGLVNL 357


>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
 gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
           AltName: Full=Polynucleotide adenylyltransferase
 gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
 gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
          Length = 522

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 188/367 (51%), Gaps = 18/367 (4%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL-TRLRGYSDQMVEDANALIFT 95
           EL++FLV+  +Y   ++ EK+ + + ++ +  + W K++     G +D     A A I+ 
Sbjct: 4   ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVKA-ATIYV 62

Query: 96  FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMK 155
           +GSYRL V+G  +DIDA  V  S ++R+ DF+  L+  L    +V EL+ +     P + 
Sbjct: 63  YGSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLS 121

Query: 156 FKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPN-- 213
             +  +  DL ++  +   + ++LDI + ++L ++DE   R++NG R  D I   VPN  
Sbjct: 122 MIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHS 181

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVY 273
            E F   +R +K W K+RG+Y  V  FL G++  +LVA+V           L+ +FF+VY
Sbjct: 182 EEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVY 241

Query: 274 TMWRW-PNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 332
           + W W   PVML   D+            N + K   + I+TPA P  N++++++  +L 
Sbjct: 242 SSWDWLRTPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLE 290

Query: 333 VMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 391
           ++  + + G  I  E        W+ LF+P   F  Y  +++  + +++ + L    G  
Sbjct: 291 MIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKF 350

Query: 392 ESRLRQL 398
           ES L  L
Sbjct: 351 ESGLVNL 357


>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
 gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
          Length = 521

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 188/367 (51%), Gaps = 18/367 (4%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL-TRLRGYSDQMVEDANALIFT 95
           EL++FLV+  +Y   ++ EK+ + + ++ +  + W K++     G +D     A A I+ 
Sbjct: 4   ELKEFLVKNDMYPMGDQVEKKRKAISKMTEYIQQWGKKIYIESAGVADDTDVRA-ATIYV 62

Query: 96  FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMK 155
           +GSYRL V+G  +DIDA  V  S ++R+ DF+  L+  L    +V EL+ +     P + 
Sbjct: 63  YGSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLS 121

Query: 156 FKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPN-- 213
             +  +  DL ++  +   + ++LDI + ++L ++DE   R++NG R  D I   VPN  
Sbjct: 122 MIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHS 181

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVY 273
            E F   +R +K W K+RG+Y  V  FL G++  +LVA+V           L+ +FF+VY
Sbjct: 182 EEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVY 241

Query: 274 TMWRWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLR 332
           + W W   PVML   D+            N + K   + I+TPA P  N++++++  +L 
Sbjct: 242 SSWDWLRAPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLE 290

Query: 333 VMMDQFQYGNTICEEVELNKAQ-WSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 391
           ++  + + G  I  E        W+ LF+P   F  Y  +++  + +++ + L    G  
Sbjct: 291 LIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKF 350

Query: 392 ESRLRQL 398
           ES L  L
Sbjct: 351 ESGLVNL 357


>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
          Length = 204

 Score =  161 bits (408), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/160 (41%), Positives = 103/160 (64%)

Query: 244 VNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 303
           V WA++VAR+CQLYPNAV S++V++FFR+   W WP P++L  I++  L   +W+P+   
Sbjct: 1   VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60

Query: 304 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 363
            DK H MPIITPAYP M +++N++ ST  +++ +      I +++ +    WSALF+ + 
Sbjct: 61  SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHD 120

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIE 403
           FF  Y++YL +   A  A+  L W G VES+LR L   +E
Sbjct: 121 FFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 160


>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
          Length = 1239

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 195/465 (41%), Gaps = 123/465 (26%)

Query: 40  KFLVEAG--LYESKEEDEKREQVLGRIRQIAKDW-----VKELTRLRGYSDQMVEDANAL 92
           KFL+     +YE +E+  KR+++L +++ I   W     VK+   LR    +  E  +A 
Sbjct: 109 KFLMREKYTIYEDQEQKRKRQEILAKLKDILDKWQIECAVKDRKILR----EDAEKRHAS 164

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
           I  FGSY L  H P  D+D +CV PSY+  + DFF    N++   EEVT +  V+DA VP
Sbjct: 165 IHPFGSYELQAHFPETDMDVICVLPSYILHD-DFFNKFKNLITSYEEVTNVIDVVDARVP 223

Query: 153 VMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP 212
           V+KFKF G  ID+LYA I   ++  +  I  M                            
Sbjct: 224 VLKFKFQGFQIDMLYACIDYKLIENNPKIPKM---------------------------- 255

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRV 272
                           K   +++ ++   GGV++A+LVA++CQ   +     ++ +FF V
Sbjct: 256 ---------------IKDETIFNKLSQ--GGVSYAILVAKICQDNTDLYLCDIIYKFFEV 298

Query: 273 YTMWRWPNPVML------CAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
           Y  W+W +PV +                 V D           MPI+TP     NS+Y V
Sbjct: 299 YADWKWFDPVFIRVGKKKDKTKLDLNKLQVLDAY-----SQDIMPILTPNTNPKNSAYRV 353

Query: 327 STSTLRVMMDQFQYGNTICEEV-------------------------------------- 348
            + T   +  +F  G  + +E+                                      
Sbjct: 354 CSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVDALQIQESN 413

Query: 349 -----------ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQ 397
                      +  K  W  LF+ + FF+ Y ++L++DI++ +    L W G+VES+LR+
Sbjct: 414 QESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLGYVESQLRR 473

Query: 398 L-TLMIERDTYGKLQCHPYP---HEYVDTSKPCAHC--AFFMGLQ 436
           L  L+ + +    L+ +P      E  DT      C  ++F+G++
Sbjct: 474 LMQLLQDIEQISGLRIYPRSFNREETQDTINNAFKCCDSYFIGIK 518


>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
 gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
 gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
          Length = 238

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 138/220 (62%), Gaps = 3/220 (1%)

Query: 11  PPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD 70
           PP K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+
Sbjct: 15  PPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKE 74

Query: 71  WVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           W++E++  +     ++E+    IFTFGSYRLGVH  GADIDALCV P +V R  DFF   
Sbjct: 75  WIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDR-SDFFTSF 133

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           ++ L   EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+ D S+L ++
Sbjct: 134 YDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNL 193

Query: 191 DEPTVRSLNGCR--VADQILKLVPNVEHFCTTLRCLKFWA 228
           D   +RSLNG R   +  +L+ + ++  F T+     F A
Sbjct: 194 DIRCIRSLNGMRKPTSFCVLQFLSDISCFYTSFVLKLFIA 233


>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
            DW4/3-1]
 gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
            DW4/3-1]
          Length = 1080

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 204/452 (45%), Gaps = 72/452 (15%)

Query: 48   YESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPG 107
            +ES E    R Q + R+ ++      EL                  + +GS+ +G  G G
Sbjct: 673  WESSEAHRARIQAVKRLNEVCSRLGLEL------------------YPYGSFLMGTSGTG 714

Query: 108  ADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLY 167
            +D+DA+ +GP+++SRE DF   L   L + ++    + + DA +P++K    G+  D+ Y
Sbjct: 715  SDVDAVVIGPAHLSRE-DFAGALLQALTQEKDCEGARFIADAAIPLVKLSLGGVHFDVSY 773

Query: 168  AS---------ISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLV----P 212
            AS          + L+ R  E LD++             RSL G    D +L+ V     
Sbjct: 774  ASRPEGVAPCPPAELLARQGERLDLAGF-----------RSLTGWADTDALLECVGREEA 822

Query: 213  NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP---NAVPSMLVSRF 269
            ++E F T LR +K WAK RGVYS+  G+LGG +WA+L A  C   P   +     L+  F
Sbjct: 823  DLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAPRDSSRTEEQLLDYF 882

Query: 270  FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 329
            F ++  W WP PV L        G + + P + +RD+   MP++ PA P  N++ NVS S
Sbjct: 883  FEMFAAWPWPLPVTLTP------GTARYVP-EGKRDQ---MPVVAPALPPRNTARNVSRS 932

Query: 330  TLRVMMDQFQYGNTICEEV--ELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAW 387
            TLRV+ ++    +        E     W ALF P          + V + A   +D    
Sbjct: 933  TLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAKAHEDRQVA 992

Query: 388  KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK---PGEVVQ 444
             GW+   L  L   +E D   +L   P+P      S+P     F +GL  +    G+ + 
Sbjct: 993  AGWILGHLTALVYRLEGDR--RLFLRPFP-----PSQP--EGPFRIGLSAQGPEAGQALS 1043

Query: 445  EGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
                  ++ +++EF+ S + +    PG  + V
Sbjct: 1044 HHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1075


>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
            [Stigmatella aurantiaca DW4/3-1]
 gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
            aurantiaca DW4/3-1]
          Length = 1024

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 192/407 (47%), Gaps = 54/407 (13%)

Query: 93   IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
            ++ +GS+ +G  G G+D+DA+ +GP+++SRE DF   L   L + ++    + + DA +P
Sbjct: 644  LYPYGSFLMGTSGTGSDVDAVVIGPAHLSRE-DFAGALLQALTQEKDCEGARFIADAAIP 702

Query: 153  VMKFKFDGLSIDLLYAS---------ISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGC 201
            ++K    G+  D+ YAS          + L+ R  E LD++             RSL G 
Sbjct: 703  LVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERLDLAGF-----------RSLTGW 751

Query: 202  RVADQILKLV----PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 257
               D +L+ V     ++E F T LR +K WAK RGVYS+  G+LGG +WA+L A  C   
Sbjct: 752  ADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRA 811

Query: 258  P---NAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
            P   +     L+  FF ++  W WP PV L        G + + P + +RD+   MP++ 
Sbjct: 812  PRDSSRTEEQLLDYFFEMFAAWPWPLPVTLTP------GTARYVP-EGKRDQ---MPVVA 861

Query: 315  PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV--ELNKAQWSALFEPYLFFESYRNYL 372
            PA P  N++ NVS STLRV+ ++    +        E     W ALF P          +
Sbjct: 862  PALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQV 921

Query: 373  QVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFF 432
             V + A   +D     GW+   L  L   +E D   +L   P+P      S+P     F 
Sbjct: 922  VVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDR--RLFLRPFP-----PSQP--EGPFR 972

Query: 433  MGLQRK---PGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICV 476
            +GL  +    G+ +       ++ +++EF+ S + +    PG  + V
Sbjct: 973  IGLSAQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1019


>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
           2259]
 gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
           2259]
          Length = 1021

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 181/404 (44%), Gaps = 51/404 (12%)

Query: 16  YGVTKPISMA-GPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           + V + I +A  P       +  L + L   G  ES E    R   + ++RQ        
Sbjct: 574 FEVIRRIPLAQAPRAIPEHEDAPLREALASIGAVESHEGHAARTAAVEQLRQ-------- 625

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
                       E   A +  +GSY LG  G G+D+DA+ +GP+ +SR+  F   L   L
Sbjct: 626 ----------HCERIGATLHPYGSYLLGTDGAGSDVDAVAIGPAELSRDA-FAQSLLQAL 674

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLN----DV 190
           A        + V DA +P++K    G+S DL YA     V  ED     +++L      +
Sbjct: 675 AP----GSARYVADAAIPLVKLTLGGVSFDLAYAGRPEGVPPED----PLTLLGLHGEQL 726

Query: 191 DEPTVRSLNGCR----VADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           D   +R++ G      + D + +     E F T LR +K WA+ RG+YS+  G+LGG++W
Sbjct: 727 DPAGLRAVLGLADTLGLMDAVARDAARTERFRTLLRAVKAWARARGIYSHALGYLGGLSW 786

Query: 247 ALLVARVC-QLYPNAVPS--MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNR 303
            LL A  C +  P+A+ S   L+S FF  +  W WP PV L               R   
Sbjct: 787 TLLAAWACTRATPDAMRSDAALLSHFFGTFAAWPWPQPVTLTPETA----------RYRP 836

Query: 304 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEP 361
             K   +P+I PA P  N++ NVS ST RV+ ++      +      ++A   W+ALF+P
Sbjct: 837 EGKRDLLPVIAPALPARNTARNVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQP 896

Query: 362 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD 405
               E+    L++ + A  A+D     GW+   +  L   +E D
Sbjct: 897 LSAHETSPAALRLSVDAPTAEDREVVAGWILGHVTALVYRLEGD 940


>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
 gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
          Length = 460

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 129/254 (50%), Gaps = 41/254 (16%)

Query: 28  TEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVE 87
            E D +R+  L +FL + G   S E+++KRE+V+  +++I   W   +   +     +  
Sbjct: 81  AEVDQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKIVMHWANAVAYEQSVPQGL-- 138

Query: 88  DANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVL 147
            A A + T+GSY LG HGP +DID LCVGP   + +  FF +L  +L    EV+ELQ + 
Sbjct: 139 -ATATVLTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLRQLLEGRPEVSELQTIE 197

Query: 148 DAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQI 207
            A VP+M+F+F G+++D  YA                                       
Sbjct: 198 KAKVPLMRFRFTGIAVDFTYAQ-------------------------------------- 219

Query: 208 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS 267
           L ++  ++ F   LRC+K WA++RG++ +  GF  G++ A+L A VC+ +P+A  + L +
Sbjct: 220 LPVIDALKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGLFA 279

Query: 268 RFFRVYTMWRWPNP 281
            FF+ +  W W  P
Sbjct: 280 VFFQTFAHWPWQVP 293



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
           H+ I+  AY C             V    F +      +   +  QW+ LFEP+ + + Y
Sbjct: 257 HLAILA-AYVCRKFPDASVNGLFAVFFQTFAHWPWQVPDSLRHDFQWTWLFEPFPYDKKY 315

Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
           + +L++ + A    +L  W GWV+SR R L L +ER     ++C P P E VD +    +
Sbjct: 316 QQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLER---AGIECDPCPSEEVDHTDNDPN 372

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
             F+ GL   P  ++    Q D     E+F  SI 
Sbjct: 373 VVFYWGL--IPERII----QVDTSSLKEDFMESIT 401


>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
          Length = 494

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 213/446 (47%), Gaps = 34/446 (7%)

Query: 35  NRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIF 94
           N +   +L    + E++EE  KR+ V+  ++ I  ++ + +T+   +      D    + 
Sbjct: 10  NEDWLSYLERYNIIETEEEKIKRKNVIDLLQHILVNFQRAVTKDLDWKRG---DIECFLS 66

Query: 95  TFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVM 154
            FGSY LG +   ADID + V P  V R+  FF     +L +   V+ ++ +  A+VP++
Sbjct: 67  PFGSYALGGYIRDADIDLVLVCPIQVLRKY-FFKFFPQLLKQQTLVSNVESIQKANVPII 125

Query: 155 KFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRV----ADQILKL 210
           K   D +SID+ +  +    V ++++  D S+L D+DE  + S++G RV     +QI + 
Sbjct: 126 KCTIDNISIDISFVRLKVERVAQNINFLDDSLLKDIDETCLASMDGPRVNQFCKNQIYR- 184

Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA---VPSMLVS 267
             +V  F   L+C+K WA +RG+YS   G+L G +W LL+ +      N      +M++S
Sbjct: 185 -QHVRLFQVCLQCIKHWATQRGIYSKPIGYLNGSSWTLLLVKAYMSIKNKELLSVTMILS 243

Query: 268 RFFRVYTMWRWPNPVMLC----AIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 323
           RFF +++ W W  PVML      I+  ++ ++      N       MPI++P +P  N +
Sbjct: 244 RFFSMWSQWPWQMPVMLTDYIPGINGTKIEYNSLAEFDNAV-----MPIVSPCHPVCNVA 298

Query: 324 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 383
             V+ ST R+M  +F+ G T+  +     A    LF P  + + Y++++ +   +     
Sbjct: 299 PYVTKSTRRIMQIEFERGWTLLNKNAHPFAIIDKLFNPVNYTQRYKHFINIVTSSTTITS 358

Query: 384 LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRK----P 439
              W   + +++ +   +IE D    LQ  P         KP      +  +Q K     
Sbjct: 359 HDTWVRKMATQIPRYLELIESDP-NILQAQP-------IMKPKQITIRYRTIQEKISLQN 410

Query: 440 GEVVQEGQQFDIRGSVEEFKLSINMY 465
           G+ +QE +  D  G++    L +  Y
Sbjct: 411 GDTLQEAKLNDFAGTLSPGTLYLAYY 436


>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
 gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
          Length = 1067

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 32/330 (9%)

Query: 96   FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTE-LQPVLDAHVPVM 154
             GSYRLGV  P +D+D +C  P+Y+S  +DF   L N+   ++ + E +Q VLDA VP++
Sbjct: 722  LGSYRLGVESPESDLDVVCQIPTYLS-GDDF---LKNVQQRLKGLCESIQLVLDAKVPLL 777

Query: 155  KFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPN- 213
            + K +G+S+DLLY  +         D +  S +N     +  ++ GC  AD I + V   
Sbjct: 778  RLKLEGISLDLLYTGV---------DKNWASGINPKPTKSEMAIIGCWEADFIREFVQEY 828

Query: 214  --VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL--YPNAVPSMLVSRF 269
               + F   LR ++ WAK R +Y N  GFLGG++WALL A  CQ     +  P  L++ F
Sbjct: 829  VPFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHTQPDKLLANF 888

Query: 270  FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 329
            F     + W  P+   A+ +A   +SV  PR         +PIIT   PC N++ N++ S
Sbjct: 889  FNHLNQYNWRQPI---ALTDAGKQYSVQVPRD-------LLPIITSIEPCQNTARNITRS 938

Query: 330  TLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKG 389
            T  ++  +F     + +E+      WS+LFEP    +    +L + ++  +   L    G
Sbjct: 939  TAEILSGEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKECG 998

Query: 390  WVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
            ++E  +  ++L+I+ + +G +   P+   Y
Sbjct: 999  YLEGYI--ISLIIQLENHG-IFVRPWAEMY 1025


>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
          Length = 269

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 136/240 (56%), Gaps = 7/240 (2%)

Query: 91  ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
           A +  FGS+ LGV     DID +C  P ++ RE  F   L+ I    + + EL+ +++A+
Sbjct: 4   AKLLPFGSFLLGVSFKEGDIDMVCASPQFIKRETHFHEDLYKIFKANKNIKELKNIIEAN 63

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLD--ISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           +P++ F ++   ID+ +A     ++ E+++  I +  +L D+ E  V SLNG R    I+
Sbjct: 64  IPIISFIYNDQDIDISFAQFKLNILPENIEGEIPE-ELLEDMTEKDVDSLNGRRCNQSII 122

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 268
             V + E F  TL+ +K WAK +GVY+N+ GFLGG++WA+LVA++CQ++PN   + L++ 
Sbjct: 123 NSVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGISWAILVAKICQMFPNYEVNQLINE 182

Query: 269 FFRVYTMWRWPN-PVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVS 327
           FF  YT W +   P+    I E             +R ++  M ++T  +P  NS+ ++S
Sbjct: 183 FFYYYTHWDFSQIPI---KIKEYYENTKHKHYNIKKRKESIFMNVMTSCFPEYNSTAHLS 239


>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 500

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 205/438 (46%), Gaps = 56/438 (12%)

Query: 55  EKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADID--A 112
           EK ++V+  +RQ+ +  ++        ++     A   ++ FGS  LG    G+DID  A
Sbjct: 39  EKTDEVVRLVRQLLEKLLQ--------AEPSAAAAWTQVYVFGSSGLGAAITGSDIDLIA 90

Query: 113 LCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISR 172
           LC      S     FF      AE   + ++  V  A VP++KF ++G+ +DLL+AS+  
Sbjct: 91  LCSA----SVNTSLFFQKFPRSAE-GRLQDVVVVTSARVPLIKFSYNGVHVDLLFASVDM 145

Query: 173 LVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRR 231
               +  ++     L+ V  P   ++NG R   +I + +P  ++ +   LR +K+WA RR
Sbjct: 146 RTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVKYWAARR 205

Query: 232 GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW----RWPNPVMLCAI 287
            VY N+  F  GV  A++VAR CQL P A  S+++  FF +Y  W       +PV +   
Sbjct: 206 QVYGNLYTFPNGVCLAIMVARACQLCPVADSSVILRFFFSLYVWWLQRGTRIDPVSIVPT 265

Query: 288 DEAELGFSV------WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
           DE      V      WD   +  D     P++ PA P +N+++ V  S L++ + +    
Sbjct: 266 DENVAIARVPGMPPPWDAVWDAADL---FPVLNPARPTVNAAHAVGRSGLQLFLKELLRA 322

Query: 342 NTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI------VAANADDLLAWKGWVESRL 395
             +C  V +    +SAL+EPY   + +R ++ V I      +AA  D + AWKG+VES+L
Sbjct: 323 EQLCSLVPM---PYSALWEPYNVLDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKL 379

Query: 396 RQLTLMIERDTYGKLQCHPYPHEYVD----------TSKPCAHCAFFMGLQRKPGEVVQE 445
           R     +E       +  P+P   VD           +  C   AFF G++    +V   
Sbjct: 380 RMFVYALE----CVAEVRPFPCPVVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNKDVAHS 435

Query: 446 GQQFDIRGSVEEFKLSIN 463
               D+  +  EF+ ++ 
Sbjct: 436 ----DVESAFREFEFAVT 449


>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
          Length = 359

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 115/195 (58%), Gaps = 5/195 (2%)

Query: 228 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI 287
           A +RG+Y NVTG+LGGVN ALL      LYPNA  S+++   FR++  W W  PV++  +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168

Query: 288 D-EAELGFS--VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTI 344
               ELG    VW+P++N R +    PI+TP YP  NS+YNV  ST  VM+ +F+    +
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228

Query: 345 CEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
              +   +  W+ LF+ + FF SY+ Y+Q+++ A  ++    W G+VES++R+ T MIE 
Sbjct: 229 TLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMIEG 288

Query: 405 DTYGKLQCHPYPHEY 419
           +    +  H YP  +
Sbjct: 289 NK--SIVIHVYPTSF 301



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 3/104 (2%)

Query: 47  LYESKEEDEKREQVLGRIRQIAKDWVKE-LTRLRGYSDQMVEDANALIFTFGSYRLGVHG 105
           LYESK E + RE++L  ++ I ++ VK+ LT    YS+Q  E+  +L +TFGS+R+ VH 
Sbjct: 7   LYESKNEIDHREELLKSLQSILRECVKKILTAKNLYSNQEPEELASL-YTFGSFRMMVHE 65

Query: 106 PGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
           P ADID +CVGP  V+REE FF ++ + L   E       V+D 
Sbjct: 66  PWADIDTMCVGPGSVTREE-FFSVVSSALQGEETCATDVNVIDT 108


>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
          Length = 253

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/269 (38%), Positives = 125/269 (46%), Gaps = 70/269 (26%)

Query: 156 FKFDGLSIDLLYASISRLVVREDLD--ISDMSVLNDVDE-PTVRSLNGCRVADQILKLVP 212
            +F G+ +DL+YA +              D SVL  +D+  T RSLNG RVAD+IL+LVP
Sbjct: 1   MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRV 272
               F T LRC+K WAK RGVYSNV GFLGG+ WA+LVAR+CQLYPN  P+         
Sbjct: 61  ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPACCSRASSAA 120

Query: 273 YTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTST 330
                 P  VML AI  D+ ELG         RR                          
Sbjct: 121 LRGGSGPARVMLRAIEHDDGELGL--------RRH------------------------- 147

Query: 331 LRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGW 390
           LRV  +Q   G+ +C+E                            IV A A     W GW
Sbjct: 148 LRVTTEQLAVGDDVCQE----------------------------IVKAGA----MWVGW 175

Query: 391 VESRLRQLTLMIERDTYGKLQCHPYPHEY 419
           VESRLRQL+  +E DT G L CH +P  Y
Sbjct: 176 VESRLRQLSARVEADTSGVLLCHLHPQAY 204


>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
           thermophila]
 gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 641

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 143/251 (56%), Gaps = 6/251 (2%)

Query: 29  EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR-LRGYSDQMVE 87
           + D +R++E++  +     + ++E +  +++ +  +++I   W  EL + + G S +  +
Sbjct: 42  KKDRERSQEIDYMM--KPYFGTEETELSKQRYVNELQEIVTKWSTELAQQILGVSSEESK 99

Query: 88  DANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVL 147
              A + TFGS  LGV     DID +C  P+++ R   F   L  IL   E V +L  + 
Sbjct: 100 KYTAKLLTFGSSILGVSSKKGDIDMVCTCPNFIKRNPHFEEELCQILLNNENVKQLSNIR 159

Query: 148 DAHVPVMKFKFDGLSIDLLYASISRLVVREDLD--ISDMSVLNDVDEPTVRSLNGCRVAD 205
            A VP++ F++    ID+ +A +    +   ++  +SD  +L +++E  + SL+G R   
Sbjct: 160 TAKVPIITFQYKEQDIDISFAQLQLPQLPPTIEEYVSD-DLLQNMEERDILSLSGRRCNQ 218

Query: 206 QILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSML 265
            I++ VPN+++F  T R +K WA+ +G+Y N  GFLGG++WA+LVA++CQ++PN   + L
Sbjct: 219 AIVRSVPNLQNFQITCRFIKLWAQSKGIYENSIGFLGGISWAILVAKICQMFPNYEANQL 278

Query: 266 VSRFFRVYTMW 276
           +  FF  Y+ W
Sbjct: 279 LDEFFYYYSNW 289


>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
 gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
          Length = 74

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 69/74 (93%)

Query: 245 NWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR 304
           N ALLVARVCQLYPNA+PSMLVSRFFRVYT WRWPNPVMLC I+E ELGFSVWDPRKN R
Sbjct: 1   NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60

Query: 305 DKTHHMPIITPAYP 318
           D+THHMPIITPAYP
Sbjct: 61  DRTHHMPIITPAYP 74


>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
 gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
          Length = 500

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 40/396 (10%)

Query: 93  IFTFGSYRLGVHGPGADID--ALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
           ++ FGS  L     G+DID  ALC      S    FFF      AE   + ++  V  A 
Sbjct: 69  VYVFGSSGLDAAITGSDIDLIALCSA----SVNTSFFFQTFPRSAE-GRLQDVVVVTSAR 123

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           VP++KF ++G+ +DLL+AS+      +  ++     L+ V  P   ++NG R   +I + 
Sbjct: 124 VPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRR 183

Query: 211 VP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRF 269
           +P  ++ +   LR +K+WA +R VY N+  F  GV  A++VAR CQL P A   +++  F
Sbjct: 184 LPLPLDAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGVILRFF 243

Query: 270 FRVYTMWRWPN----PVMLCAIDEAELGFSV------WDPRKNRRDKTHHMPIITPAYPC 319
           F +Y  W   +    PV +   DE      V      WD      D     P++ PA P 
Sbjct: 244 FSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPPPWDAVW---DAADLFPVLNPARPT 300

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI--- 376
           +N+++ V  S L++ + +      +C  V ++   +SAL+EPY   + +R ++ V I   
Sbjct: 301 VNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWEPYNILDEHRFFVGVHISSE 357

Query: 377 ---VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY---PHEYVDTSKPCAHC- 429
              +AA  D + AWKG+VES+LR     +E     +    P    P   V       HC 
Sbjct: 358 HQSLAACEDTINAWKGYVESKLRMFVYALECVAEVRPFSRPVVDEPPRVVTRRGVKVHCR 417

Query: 430 --AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
             AFF G++    +V    +  D+  +  EF+ ++ 
Sbjct: 418 SRAFFFGVRNGNKDV----EHSDVEAAFREFEFAVT 449


>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 420

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 107/193 (55%), Gaps = 39/193 (20%)

Query: 64  IRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSRE 123
           I+++  ++VK + R +G S   +E A   IFT+GSYRLGV+GP                 
Sbjct: 21  IQRVVIEFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGP----------------- 63

Query: 124 EDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISD 183
                                 V DA VP++K +F G+S+DL++A +    +  +LD+ +
Sbjct: 64  ----------------------VPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKN 101

Query: 184 MSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 243
              L  +D+  VRSLNG RV DQIL+LV   + F   LR +K WA+RR +YSN+ GF GG
Sbjct: 102 NGYLRGLDDKEVRSLNGTRVTDQILELVAQQKTFRLALRAIKLWAQRRAIYSNIVGFPGG 161

Query: 244 VNWALLVARVCQL 256
           V WA+LVARVCQL
Sbjct: 162 VAWAMLVARVCQL 174


>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
           vaginalis G3]
 gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
           vaginalis G3]
          Length = 467

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 210/443 (47%), Gaps = 30/443 (6%)

Query: 45  AGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVH 104
           + L  + E+ + R+ V+  I+ IA  + +   RL    +   +     I   GSY +   
Sbjct: 30  SKLMPTLEDYQSRKIVVYIIKNIAIKFAERKQRLSFSMNTDPKSPEIFIHENGSYLMDTW 89

Query: 105 GPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSID 164
            P +D+D + + P Y + + DFF   +  L     + E   V +A VP++K   + +S+D
Sbjct: 90  EPDSDVDVILIAPKYFTYK-DFFEGFYEELIRHPSIKETIKVENAFVPIIKTVCNDISVD 148

Query: 165 LLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNG---CRVADQILKLVPNVEHFCTTL 221
           + +A ++  +  ++L+      ++ ++     SLNG   C +   ++K  PN  +F    
Sbjct: 149 ISFAPLNNQIKIKNLNNIKKEDMDKLEPKAQLSLNGYLNCLLIRDLMKNHPNFPYFT--- 205

Query: 222 RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNP 281
           R ++ WA++R ++ N+ G+L G+N +++ A +C  +PN   SML+  FF  ++ W W   
Sbjct: 206 RFIRNWAQKREIFGNLYGYLKGINISMMCAIICNQHPNCSLSMLIFHFFEYFSSWDWD-- 263

Query: 282 VMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG 341
            +   +D     F + DP          M ++T +YP +NS   V+TS+ + ++ + Q  
Sbjct: 264 -IQLNLDSNTPDFQLNDP----------MILMTQSYPQINSLRAVTTSSRKRIIKELQRA 312

Query: 342 NTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLM 401
               ++  ++   W  LF+   FF  YR +L +D++  N+       G++ S+L +L  +
Sbjct: 313 LETTKKALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQIKDEIIGFLSSKLTRLVKI 372

Query: 402 IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLS 461
           +E +  G  + + +P +     K      F++GL  K G    + +  DI  +   F   
Sbjct: 373 LE-EIPGICEANIWPSKISYGGK----IIFYIGLNTKSG----QSKTIDINHAKNNFISY 423

Query: 462 INMYMFWKPGMEICVSHIRRKQI 484
           I+     K  M I    IR+K++
Sbjct: 424 ISSSTLGK-AMSINFKIIRKKEL 445


>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
 gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
          Length = 500

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 185/400 (46%), Gaps = 48/400 (12%)

Query: 93  IFTFGSYRLGVHGPGADID--ALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
           ++ FGS  L     G+DID  ALC      S     FF      AE   +  +  V  A 
Sbjct: 69  VYVFGSSGLDAAITGSDIDLIALCSA----SVNTSLFFQTFPRSAE-GRLQNVVVVTSAR 123

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           VP++KF ++G+ +DLL+AS+      +  ++     L+ V  P   ++NG R   +I + 
Sbjct: 124 VPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRR 183

Query: 211 VPNV-EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRF 269
           +P +   +   LR +K+WA +R VY N+  F  GV  A++VAR CQL P A   +++  F
Sbjct: 184 LPLLLAAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGVILRFF 243

Query: 270 FRVYTMWRWPN----PVMLCAIDEAELGFSV------WDPRKNRRDKTHHMPIITPAYPC 319
           F +Y  W   +    PV +  +DE      V      WD      D     P++ PA P 
Sbjct: 244 FSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVW---DAADLFPVLNPARPT 300

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI--- 376
           +N+++ V  S L++ + +      +C  V ++   +SAL+ PY   + +R ++ V I   
Sbjct: 301 VNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWAPYNILDEHRFFVGVHISSE 357

Query: 377 ---VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD----------TS 423
              +AA  + + AWKG+VES+LR     +E       +  P+P   VD           +
Sbjct: 358 HQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPVVDEPPRAVTRRGVT 413

Query: 424 KPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
             C   AFF G++    +V       D+  +  EF+ ++ 
Sbjct: 414 VHCRSRAFFFGVRNGNNDVAHS----DVEAAFREFEFAVT 449


>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
 gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
          Length = 1037

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 197/431 (45%), Gaps = 48/431 (11%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           V K I   G        N EL + + E     +  +   R+ V+  ++Q         T 
Sbjct: 580 VVKHIVGVGKLRPKAIENSELIELITEIEPVLTDAQQSHRDTVVAVVKQAC-------TE 632

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM 137
             G++        A +   GS RLGV    +D+D +C+ P Y++ E  F   + + L  +
Sbjct: 633 CLGFA--------ASLHLLGSARLGVASSTSDLDVVCLIPDYLTGES-FLTRVADCLQGL 683

Query: 138 EEVTE------LQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDM-SVLNDV 190
            +  E       Q VLDA  PV++ + +G+S+DLLY  ++     E  +I D+ S + D 
Sbjct: 684 CDSPEERLCQRSQVVLDAKYPVLRLEIEGISLDLLYTQVAVSDGWETRNIRDLRSQIKDT 743

Query: 191 DEPTVRSLNGCRVADQILKLVPN---VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWA 247
                +S+ GC  AD I+ LV     +E F   L+ ++ WAK RG+Y N  GFLGG +W+
Sbjct: 744 -----KSIVGCWEADLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWS 798

Query: 248 LLVARVCQLY--PNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           LL A  C  Y  P+   + L++ FF++ +   W   + L      ELG      +   + 
Sbjct: 799 LLCAYTCIDYRGPDKSLAALLANFFQILSQHNWRQTIAL-----TELG-----KQHQVKL 848

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
               +PII+   PC N++ N++ ST +++ D+F     I   + + K  W++L+EP    
Sbjct: 849 PQDLLPIISSIEPCKNTARNITRSTAKILRDEFARAAEISTNILVGKDAWTSLYEPIDLT 908

Query: 366 ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
                 L ++I+  +          +ES +  LT+ +E     +L     P+  + TS+ 
Sbjct: 909 IGTNALLSIEILDTDEQCRQKCSDLLESTIIGLTIQLE-----QLDVFVRPNPQISTSES 963

Query: 426 CAHCAFFMGLQ 436
            +    F+ L+
Sbjct: 964 KSIFTLFLQLR 974


>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
          Length = 323

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 130/237 (54%), Gaps = 15/237 (6%)

Query: 278 WPNPVMLCAI---DEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVM 334
           WP PV+L ++   ++  L F VWDPR N  D  H MPIITP YP  N+++ V+ S+  +M
Sbjct: 3   WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62

Query: 335 MDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESR 394
            ++ + G  I  ++   + +W ALFEP  FF+ Y++YL + +      D L W G+ ES+
Sbjct: 63  TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122

Query: 395 LRQLTLMIERDTYGKL-QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQF-DIR 452
           LR L   +ER+   KL   HP P   ++ S     C +F+GL      V  E Q F D+ 
Sbjct: 123 LRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGLTF----VKIENQNFVDLT 178

Query: 453 GSVEEFKLSINMYMF----WKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 505
             ++ F  +++   +     K GM++ + H++R+Q+  YV PE   +++  R+A+ Q
Sbjct: 179 FDIQSFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLYVPPEILLQSK--RVAAAQ 233


>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 417

 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 164/345 (47%), Gaps = 41/345 (11%)

Query: 146 VLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVAD 205
           V  A VP++KF + G+ +DLL+AS+      +  ++     L+ V  P   ++NG R   
Sbjct: 36  VTSARVPLIKFSYKGVHVDLLFASVDMRTAPDTSELLRDDFLSLVSLPCRATVNGIRTIL 95

Query: 206 QILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 264
           +I + +P  ++ +   LR +K+WA +R VY N+  F  GV  A++VAR CQ  P A   +
Sbjct: 96  EIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQFCPVADSGV 155

Query: 265 LVSRFFRVYTMWRW----PNPVMLCAIDEAELGFSV------WDPRKNRRDKTHHMPIIT 314
           ++  FF +Y  W       +PV +   +E      V      WD      D     P++ 
Sbjct: 156 ILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPPPWD---AVWDAADLFPVLN 212

Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
           PA P +N+++ V  S L++   +      +C  V L+   +S L++PY   + +R ++ V
Sbjct: 213 PAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVPLS---YSELWKPYNILDEHRFFVGV 269

Query: 375 DI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK---- 424
            I      +AA  D + AWKG+VES+LR L   +E       +  P+P   VD S     
Sbjct: 270 HISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----CVAEVRPFPRPVVDESPREVT 325

Query: 425 ---PCAHC---AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
                 HC   AFF G++    +V +     D+  +  EF+ S+ 
Sbjct: 326 RSGVTMHCRSRAFFFGVRNGNKDVARS----DVEAAFSEFEFSVT 366


>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
 gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
          Length = 1016

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 160/342 (46%), Gaps = 26/342 (7%)

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           + RL G    + E     +  +GSY LG    G+D+DA+ +GPS +SR++    +L  + 
Sbjct: 619 VARLHG----LCERIGTSLHPYGSYLLGTDEAGSDVDAVAIGPSSLSRDDFAHALLREVA 674

Query: 135 AEM-EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR-EDLDISDMSVLNDVDE 192
               E  +  + V DA +P++K    G+S D+ YAS    V   E L +        +D 
Sbjct: 675 TSAPEAASSARFVADAAIPLVKLSLGGVSFDVSYASRPEGVTPCEPLTLLAQHA-PQLDT 733

Query: 193 PTVRSLNGCRVADQILKLV----PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAL 248
             +RS+ G   +  +L  +       E F   LR +K WAK RG+YS+  G++GG++W +
Sbjct: 734 SGLRSVLGVADSQGVLDALGTDEATHERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTV 793

Query: 249 LVARVC-QLYPNAVPS--MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
           L A  C +  P+A  S   L++ FF+ +  W WP PV   A+ +   G+        +RD
Sbjct: 794 LAAWACTRGAPDAAKSDAELLAHFFQTFASWPWPQPV---ALTQETAGYRP----DGKRD 846

Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA--QWSALFEPYL 363
               MP+I PA P  N++ NVS ST R + ++      +      + +   W  LF+P  
Sbjct: 847 L---MPVIAPAEPLRNTARNVSRSTFRTVREELVRARELVTGARASSSPHAWEPLFQPVD 903

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERD 405
                   L++ + A   +   A  GWV   L  L   +E D
Sbjct: 904 APRDLPARLRLSVEAPTPEAHEAAMGWVLGHLTALVYRLEGD 945


>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
          Length = 487

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 192/452 (42%), Gaps = 57/452 (12%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YG TKP+ +  P + D   +  L   L E               VL  +  +A       
Sbjct: 5   YGPTKPLEVPRPQDHDYDESEMLYGVLAEC-------PSISPNPVLTLVESMA------- 50

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF-----IL 130
            R+     Q  ++  A  + FGS  L      +D+D   + PS ++   D FF     +L
Sbjct: 51  LRIVQRHSQNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLT--TDIFFDEFPRLL 108

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +N +  +        V+ A VPV+KF++ G ++D+++ S+       +  + D S L  V
Sbjct: 109 YNSVGPVS-------VVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKV 161

Query: 191 DEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
              T  S NG R   +I + +P   + F   L+ +K WA RR VY NV  +  G   A++
Sbjct: 162 ARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIM 221

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----SVWDPRK 301
           VARVCQ+ P++ PS L+  FF  YT W   +    PV L A  E           W P K
Sbjct: 222 VARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSK 281

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
           + +      P+I+PAYP +N + +V    L  +  +      I  EV     +   ++EP
Sbjct: 282 D-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEITRVQCILTEVRTLPLE--EMWEP 338

Query: 362 YLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           Y   E Y  +L V +      +A     L  W  +V SRLR L   IER      Q  P 
Sbjct: 339 YRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPC 394

Query: 416 PHE-------YVDTSKPCAHCAFFMGLQRKPG 440
           P +       +V  S       F +G++ K G
Sbjct: 395 PRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEG 426


>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
 gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
 gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 487

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 189/448 (42%), Gaps = 49/448 (10%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YG TKP+ +  P + D   +  L   L E               VL  +  +A       
Sbjct: 5   YGPTKPLEVPRPQDHDYDESEMLYGVLAEC-------PSISPNPVLTLVESMA------- 50

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF-----IL 130
            R+     Q  ++  A  + FGS  L      +D+D   + PS ++   D FF     +L
Sbjct: 51  LRIVQRHSQNTQEQWARAYPFGSCGLSASVAESDLDVALICPSVLT--TDIFFDEFPRLL 108

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +N +  +        V+ A VPV+KF++ G ++D+++ S+       +  + D S L  V
Sbjct: 109 YNSVGPVS-------VVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKV 161

Query: 191 DEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
              T  S NG R   +I + +P   + F   L+ +K WA RR VY NV  +  G   A++
Sbjct: 162 ARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIM 221

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----SVWDPRK 301
           VARVCQ+ P++ PS L+  FF  YT W   +    PV L A  E           W P K
Sbjct: 222 VARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSK 281

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
           + +      P+I+PAYP +N + +V    L  +  +       C   E        ++EP
Sbjct: 282 D-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEIT--RVQCILTEARTLPLEEMWEP 338

Query: 362 YLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGK---LQC 412
           Y   E Y  +L V +      +A     L  W  +V SRLR L   IER    +    + 
Sbjct: 339 YRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHAQARPCPRKI 398

Query: 413 HPYPHEYVDTSKPCAHCAFFMGLQRKPG 440
            P    +V  S       F +G++ K G
Sbjct: 399 RPKKDNHVGGSSCFLSVNFLIGVKAKEG 426


>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
 gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
          Length = 485

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 203/462 (43%), Gaps = 59/462 (12%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG-RIRQIAKDWVKE 74
           YG TKP+ +      D+                ESK   E    V+  R+R+ A D + E
Sbjct: 5   YGPTKPLEVPPAQPRDLA---------------ESKRLCETMATVVADRVRE-AIDLI-E 47

Query: 75  LTRLRGYSDQMV---EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           LT  R   DQ+    E+     + FGS  LG     +D+D + +  S+    E FF    
Sbjct: 48  LTAHR-LVDQITAEPEERWVRAYPFGSCGLGASVADSDLD-IVLFCSFKVTAEVFFREFP 105

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L  +     L P   A VPV+KF + G S+D+++ S +         + D S L  V 
Sbjct: 106 PLLQPVVGNVVLVP---ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVA 162

Query: 192 EPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
             T  S+NG R   ++ + +P   + F T L+ +K WA RR VY N+  +  GV  A++V
Sbjct: 163 RDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMV 222

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----SVWDPRKN 302
           AR+CQ+ P + P++L+  FF  YT W   +    PV +    E+          WDPR++
Sbjct: 223 ARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLPDSWDPRRD 282

Query: 303 R-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
             RD    +P+I PAYP +N + NV   +L V   +  Y   +   +E       A++EP
Sbjct: 283 ACRDDL--LPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLE---TPLEAIWEP 337

Query: 362 YLFFESYRNYLQVDIVAANADD------LLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           Y   + Y  +  V +     ++      L  W  +V S+LR L   +ER     +   PY
Sbjct: 338 YHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----IVDARPY 393

Query: 416 PHEYVD--------TSKPCAHCAFFMGLQRKPGEVVQEGQQF 449
           P +  D        + +      F +G++ K G    +   F
Sbjct: 394 PQKLNDGPPRSAPKSGRFLKGSCFIVGIKEKVGRRFPQKNMF 435


>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
          Length = 487

 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 190/452 (42%), Gaps = 57/452 (12%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
           YG TKP+ +  P + D   +  L   L E               VL  +  +A       
Sbjct: 5   YGPTKPLEVPRPQDHDYDESEMLYGVLAEC-------PSISPNPVLTLVESMA------- 50

Query: 76  TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFF-----IL 130
            R+     Q  ++  A  + FGS  L      +D+D   + PS ++   D FF     +L
Sbjct: 51  LRIVQRHSQNTQEQWARAYPFGSCGLSAAVAESDLDVALICPSVLT--TDIFFDEFPRLL 108

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
           +N +  +        V+ A VPV+KF++ G ++D+++ S+       +  + D S L  V
Sbjct: 109 YNSVGPVS-------VVAARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKV 161

Query: 191 DEPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
              T  S NG R   +I + +P   + F   L+ +K WA RR VY NV  +  G   A++
Sbjct: 162 ARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIM 221

Query: 250 VARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLCAIDEAELGF----SVWDPRK 301
           VARVCQ+ P++ PS L+  FF  YT W   +    PV L A  E           W P K
Sbjct: 222 VARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSK 281

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
           + +      P+I+PAYP +N + +V    L  +  +       C   E        ++EP
Sbjct: 282 D-KICCDLFPVISPAYPYVNDASSVGRCGLEALYSEIT--RVQCILTEARTLPLEEMWEP 338

Query: 362 YLFFESYRNYLQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           Y   E Y  +L V +      +A     L  W  +V SRLR L   IER      Q  P 
Sbjct: 339 YRIEEEYSTFLVVGVSCAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPC 394

Query: 416 PHE-------YVDTSKPCAHCAFFMGLQRKPG 440
           P +       +V  S       F +G++ K G
Sbjct: 395 PRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEG 426


>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
 gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
          Length = 199

 Score =  129 bits (323), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 68/192 (35%), Positives = 122/192 (63%), Gaps = 2/192 (1%)

Query: 15  QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
           +YGV+ P+S+  PTE D+++  ++ + L    L+E+++  +KRE+VLG I ++  ++V E
Sbjct: 8   EYGVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIE 67

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           L+  +G +++  ++    ++TFGSYRLGV  P +DID + + P  V+R E FF   +  L
Sbjct: 68  LSISQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNVTR-EIFFNEFYLKL 126

Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVRE-DLDISDMSVLNDVDEP 193
            +   V +LQ + + + P+++F +D + IDLL A++    +++    + +  +L ++DE 
Sbjct: 127 QQDRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEV 186

Query: 194 TVRSLNGCRVAD 205
           TVRSLNG RVAD
Sbjct: 187 TVRSLNGIRVAD 198


>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
          Length = 528

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 90/151 (59%), Gaps = 1/151 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L   +   G++E +EE   R  VLG++  + K+W+ 
Sbjct: 67  KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 126

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           +++  +     +V      IFTFGSYRLGVH  GADIDALCV P +V R  DFF      
Sbjct: 127 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEK 185

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSID 164
           L   + +  L+ V DA VPV+KF+FDG+ ++
Sbjct: 186 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEVN 216



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 30/38 (78%)

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 339
           N  D+ H MPIITPAYP  NS+YNVSTST  VM+++F+
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFK 253


>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
 gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
          Length = 311

 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 37/178 (20%)

Query: 187 LNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNW 246
           L DV     + LNG RVA+Q+L  VPN + FC +LR +K WAK  GVYSN  GF GG+ W
Sbjct: 61  LIDVRISNGKILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITW 118

Query: 247 ALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDK 306
           A+LVAR CQLYPNA PS ++ + F V++ W WP+PV+L   D                  
Sbjct: 119 AILVARTCQLYPNAAPSKIIQKVFLVFSTWNWPSPVILKHFD------------------ 160

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 364
                       C++S      +TL ++  + +    IC  ++   A W+ L   + F
Sbjct: 161 ------------CVDSK-----TTLHIIQKEMKAALKICNRIQKGNATWNDLANWFRF 201



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 37/63 (58%)

Query: 17 GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
          GV +PIS+  P + D+  +  L ++L ++  +ESKEE  +R   L ++  + K W+K L 
Sbjct: 3  GVPQPISLDTPNKNDISLSNSLNEYLKQSKCFESKEEASQRVNTLSKLNLLVKKWIKSLI 62

Query: 77 RLR 79
           +R
Sbjct: 63 DVR 65


>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 113

 Score =  122 bits (306), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/104 (49%), Positives = 74/104 (71%), Gaps = 4/104 (3%)

Query: 240 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDE-AELG---FS 295
           F GG+ WA+LVARVCQ++PN     LV RFF + + W W NPV LC I + +E+G   F 
Sbjct: 1   FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 339
           VW+P++   D++H MP+ITPA+P MNS+YNV+ +T R++M + +
Sbjct: 61  VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIE 104


>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
           IL3000]
          Length = 356

 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 152/307 (49%), Gaps = 42/307 (13%)

Query: 161 LSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEH--FC 218
           +S+D+++ S++         + D S L  V   T  S+NG R   ++ + +P V H  F 
Sbjct: 1   MSVDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLP-VPHKVFA 59

Query: 219 TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWR- 277
           T L+ +KFWA RR VY N+  +  G  +A++VARVCQ+ P+  PS+L+  FF  YT W  
Sbjct: 60  TVLKAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMS 119

Query: 278 ---WPNPVMLCAIDEAELGF----SVWDPRKNR--RDKTHHMPIITPAYPCMNSSYNVST 328
                +PV L A  E+          W P KN   RD     P+I+PAYP +N + NV  
Sbjct: 120 RHDHISPVYLTATLESRGRIPGLPESWKPAKNECFRDL---FPVISPAYPYVNDASNVGR 176

Query: 329 STLRVM---MDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA-----AN 380
             L  +   + Q Q   +  + + L K     L+ PY   E + ++L V++ +     A+
Sbjct: 177 CGLESLYSEITQAQRVISASDTLSLEK-----LWRPYCIMEDFAHFLLVEVSSLGDDMAD 231

Query: 381 ADDLLA-WKGWVESRLRQLTLMIERDTYGKLQCHPYPHE--------YVDTSKPCAHCAF 431
           A+ +L  W  +V S+LR L   +ER  + +    P+PH+        +VD    C+   F
Sbjct: 232 AERILGRWGSYVGSKLRFLIYSVERFVHAR----PHPHKLRAKMDGTFVDRKVCCSSIYF 287

Query: 432 FMGLQRK 438
            +G++ K
Sbjct: 288 LIGVRSK 294


>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
          Length = 426

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 39/284 (13%)

Query: 163 IDLLYASISRLVVREDLDISDM--SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTT 220
           +DL+ + ++   + + LD       +  ++D  +VRSL+G  +A ++ K++    HF   
Sbjct: 51  VDLVISRLATSYIPQQLDFEQTPGDLYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPL 110

Query: 221 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ-LYPNAVPSM--------------- 264
           LR ++ W + R + S V GF   + W ++V  +C+ L  N+  S                
Sbjct: 111 LRVIRTWVRARAIGSYVYGFPASIAWTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEP 170

Query: 265 --------------------LVSRFFRVYTMWRWPNPVMLCAIDEA-ELGFSVWDPRKNR 303
                               LV  FF  +  W WP+PV + +I  A +L    WDP++N 
Sbjct: 171 AAERNSGEESLASRSHALFCLVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNA 230

Query: 304 RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL 363
           +D    MPI+TP +P  N+++ V  +T +++ D+      I  +V      W  LFE Y 
Sbjct: 231 QDGRDLMPILTPVFPNKNAAFTVRQATRKIVTDELIRARDIVSDVLRGSGTWEKLFERYD 290

Query: 364 FFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTY 407
             + +R++L + +   + ++L+   G ++SRLR L   +E + Y
Sbjct: 291 LRDDHRHFLLLTLQTTSKEELVVVGGLIDSRLRDLAQALEDEQY 334


>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
 gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
 gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
          Length = 129

 Score =  119 bits (297), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 60/110 (54%), Positives = 74/110 (67%), Gaps = 3/110 (2%)

Query: 157 KFDGLSIDLLYASISRLVVREDLD--ISDMSVLNDVDE-PTVRSLNGCRVADQILKLVPN 213
           +F G+ +DL+YA +              D SVL  +D+  T RSLNG RVAD+IL+LVP 
Sbjct: 2   RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 263
              F T LRC+K WAK RGVYSNV GFLGG+ WA+LVAR+CQLYPN  P+
Sbjct: 62  TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111


>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
           Y486]
          Length = 486

 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 40/395 (10%)

Query: 94  FTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPV 153
           + FGS  L      +D+D +   P  V+    F    H     ++ V     V+ A VPV
Sbjct: 69  YPFGSCGLAASVADSDLDIVLFCPFKVTAAVFF----HEFPLLLQTVVGHVIVVAARVPV 124

Query: 154 MKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP- 212
           +KF  +G  +DL++ S++         + D S L  V   T  S+NG R   +I + +P 
Sbjct: 125 VKFAHEGTLVDLVFVSVALAAPPTTEQLLDDSFLLQVARETRHSVNGIRFTLEIKRRLPV 184

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRV 272
             + F T L+ +K WA +R VY N+  +  GV  A++VAR CQ+ P + P++++  FF  
Sbjct: 185 TYDVFSTVLKVVKLWAMKRQVYGNLYTYPSGVVLAIMVARACQVMPASHPNVVLRFFFLF 244

Query: 273 YTMWRWPN----PVMLCAIDEAELGF----SVWDPRKNRRDKTHH--MPIITPAYPCMNS 322
           YT W   +    PV +    +           WDP     +K  H  +P++ PAYP +N 
Sbjct: 245 YTQWMSRHDRISPVYITTSLQGRGRVPGMPEPWDPAL---EKFSHDLLPVLNPAYPFVND 301

Query: 323 SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVA---- 378
           +  V    L V   +    + +    E        +++PY   + + ++L V +      
Sbjct: 302 ANAVGRCGLEVFYSEVTRAHHLLSTTE--SFPLEDVWKPYSITDDFSSFLLVQVSCDGNS 359

Query: 379 --ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA--------H 428
                +DL  W  +V S+LR L   +E      +   PYPH+  D               
Sbjct: 360 EEGVENDLEVWSSYVASKLRILIYAVE----CIVDARPYPHKLKDRVATSLLGPQHIRRG 415

Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
           C F +G++ +     Q+  Q     +++EF+ ++ 
Sbjct: 416 CVFLIGVRERKDR--QKLHQSMFSSALDEFRYAVQ 448


>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1251

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 154/339 (45%), Gaps = 45/339 (13%)

Query: 90   NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
            +A I   GS++LGV    +D+D LC+GP  +S   D F        E   +  ++PV DA
Sbjct: 821  HASIQLTGSHQLGVDTSDSDLDVLCLGPHSLSL--DAFQAAAVNEFEAIGLRSVRPVCDA 878

Query: 150  HVPVMKFKF-DGLSIDLLYASISRLVVREDLDISDMSV----LNDVDEPTVRSLNGCRVA 204
             VP++K  F  G   DLLY    RL     L  +   +    L  +D     +L G    
Sbjct: 879  LVPLVKLVFRSGAEADLLYV---RLPADAHLPCTPAQIKPRSLKAMDSTAQLTLQGWLEN 935

Query: 205  DQILKLVPN--VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR-VCQLYPNAV 261
            D ++  +P   +  F + LR +K WA  RG+YSN  GFLGG +W++LVA  + +  P+ +
Sbjct: 936  DALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGFSWSVLVAHFMVKTKPSPL 995

Query: 262  ----------PSM-LVSRFFRVYTMWRWPNPVML-----CAIDEAELGFSVWDPRKNRRD 305
                      P + L+  FF     W WP P++L       +    +G SV         
Sbjct: 996  GDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATLPADAIGESV--------- 1046

Query: 306  KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFF 365
                MP++TP +P  NS+  VS STL VM  + Q G  +    + + A   A+ +P    
Sbjct: 1047 ----MPVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLTAAADCSLA---AVADPLGVS 1099

Query: 366  ESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIER 404
               +  L V +   N  +L    GW+ SRL  L   +ER
Sbjct: 1100 TLAKGILVVQLQCLNKSELERGAGWLLSRLGVLVHELER 1138


>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
          Length = 79

 Score =  117 bits (294), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/76 (63%), Positives = 60/76 (78%)

Query: 201 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA 260
           CRVAD+IL+LVPN+ +F   LR +K WAK  G+YSNV G+LGGV+WA+LVAR CQLYPN 
Sbjct: 1   CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60

Query: 261 VPSMLVSRFFRVYTMW 276
            P+ LV +FF +YT W
Sbjct: 61  GPARLVQKFFLLYTKW 76


>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
          Length = 358

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 14/193 (7%)

Query: 302 NRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP 361
           N  D+ H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE 
Sbjct: 2   NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEA 61

Query: 362 YLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYP 416
             FF+ Y++Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P
Sbjct: 62  PNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAP 121

Query: 417 HEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPG 471
            E  D  K      + +GL  K  E   E    D+   ++ F     + +IN  MF +  
Sbjct: 122 KENPD--KEEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVD 177

Query: 472 MEICVSHIRRKQI 484
           M+I   H++RKQ+
Sbjct: 178 MKIAAMHVKRKQL 190


>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
          Length = 425

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%)

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  FF+ YR
Sbjct: 1   MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 429
           +Y+ +   A+  ++ L W G VES++R L   +ER+ +  L  H  P  +    +     
Sbjct: 61  HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDN 119

Query: 430 AF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRK 482
            +    F+G+   + +  E V     +DI+   +      N     K GM+I  +H+++K
Sbjct: 120 NYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKK 179

Query: 483 QIPPYVFPEGYKRTRHPRLASQQRSS 508
           Q+  Y+  E  ++ +   L+   RSS
Sbjct: 180 QLHHYLPAEILQKKKKQSLSDVNRSS 205


>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
 gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
          Length = 674

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 14/229 (6%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE------LTRLRGYSDQ--MVEDA 89
           L  +L    LY S EE  K+E +L  +  I  DWV E      L  ++ Y  Q  M    
Sbjct: 96  LLSYLKNCKLYVSSEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 155

Query: 90  NAL-IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
             + ++ FGSY LG++ P +D+D + + P YV R  DFF     I+ +M +V+    + D
Sbjct: 156 RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYV-RIADFFDKFPTIIGQMPQVSYFDCIRD 214

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VP++   +D +  DL  A ++   V + +   D     ++ E ++ SLNG R    + 
Sbjct: 215 AKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 274

Query: 209 KLVPNVEHFCTTL----RCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
                   F +T     R L+ W KR+ +YSN  GF GG+N  +LVA V
Sbjct: 275 SQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 323


>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
          Length = 129

 Score =  115 bits (288), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 3/110 (2%)

Query: 157 KFDGLSIDLLYASISRLVVREDLD--ISDMSVLNDVDE-PTVRSLNGCRVADQILKLVPN 213
           +F G+ +DL+YA +              D SVL  +D+  T  SLNG RVAD+IL+LVP 
Sbjct: 2   RFRGVQVDLVYAGVCLPWCPTTWSGPQRDRSVLRGLDDLATAHSLNGIRVADEILRLVPE 61

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 263
              F T LRC+  WAK RGVYSNV GFLGG+ WA+LVAR+CQLYPN  P+
Sbjct: 62  TAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111


>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
          Length = 609

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 14/229 (6%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE------LTRLRGYSDQ--MVEDA 89
           L  +L +  LY S EE  K+E +L  +  I  DWV E      +  ++ Y  Q  M    
Sbjct: 39  LLSYLKDCKLYVSPEEARKKEAILRTLELIISDWVYETYKDAFMANMQFYRKQPNMPRSE 98

Query: 90  NAL-IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
             + ++ FGSY LG++ P +D+D + V P YV R  DFF     I+ +M +V+    + D
Sbjct: 99  RLVRLYPFGSYYLGINEPSSDVDTVVVFPQYV-RIADFFDKFPTIIGQMPQVSYFDCIRD 157

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VP++   +D +  DL  A ++   + + +   D     ++ E ++ SLNG R    + 
Sbjct: 158 AKVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 217

Query: 209 KLVPNVEHFCTTL----RCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
                   F  T     R L+ W+KR+ +YSN  GF GG+N  +LVA V
Sbjct: 218 SQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGINCIILVANV 266


>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
          Length = 617

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 113/229 (49%), Gaps = 14/229 (6%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE------LTRLRGYSDQ--MVEDA 89
           L  +L +  LY S EE  K+E +L  +  I  DWV E      L  ++ Y  Q  M    
Sbjct: 39  LLSYLKDCKLYVSPEETRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSE 98

Query: 90  NAL-IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
             + ++ FGSY LG++ P +D+D + + P YV R  DFF     I+ +M +V+    + D
Sbjct: 99  RLVRLYPFGSYYLGINEPSSDVDTVVIFPQYV-RIVDFFDKFPTIIGQMPQVSYFDCIRD 157

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VP++   +D +  DL  A ++   V + +   D     ++ E ++ SLNG R    + 
Sbjct: 158 AKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVK 217

Query: 209 KLVPNVEHFCTTL----RCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
                   F +T     R L+ W KR+ +YSN  GF GG+N  +LVA V
Sbjct: 218 SQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCIILVANV 266


>gi|76154117|gb|AAX25625.2| SJCHGC06256 protein [Schistosoma japonicum]
          Length = 166

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 1/147 (0%)

Query: 12  PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDW 71
           P +  G T  +S   PTE D++  +ELE  L +  ++E++EE  +R + L R+++I+  W
Sbjct: 17  PARCLGETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGW 76

Query: 72  VKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           +++    +     +       IFTFGSYRLGV+  GADID+L V P +++REE FF    
Sbjct: 77  IRQKALEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQ 135

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKF 158
            +LAE   V +L  V+DA VPV+K KF
Sbjct: 136 TVLAENPNVEDLHAVVDAFVPVLKMKF 162


>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
          Length = 83

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/83 (62%), Positives = 59/83 (71%)

Query: 240 FLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDP 299
           FLGGV+WA+LVAR CQLYPNA+ S LV +FF V   W WPNPV+L   +E  L   VWDP
Sbjct: 1   FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60

Query: 300 RKNRRDKTHHMPIITPAYPCMNS 322
           R N  D+ H MPIITPAYP  NS
Sbjct: 61  RVNPSDRYHLMPIITPAYPQQNS 83


>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
          Length = 435

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 305 DKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLF 364
           D+ H MPIITPAYP  NS+YNVSTST  VM+++F+ G  + +E+   K+ WS L EP  F
Sbjct: 1   DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 60

Query: 365 FESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 424
           F+ YR+Y+ +   A+  ++   W G VES++R L   +ER+ +  L  H  P  +    +
Sbjct: 61  FQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 119

Query: 425 PCAHCAF----FMGL---QRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVS 477
                 +    F+G+   + +  E V     +DI+   +      N     K GM+I  +
Sbjct: 120 HHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEAT 179

Query: 478 HIRRKQIPPYVFPEGYKRTR 497
           H+++KQ+  Y+  E  ++ +
Sbjct: 180 HVKKKQLHHYLPAEILQKKK 199


>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
 gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
          Length = 388

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 2/148 (1%)

Query: 7   MSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQ 66
           MS  P  K YGV++PIS   PT++D +    L + L +   YESKEE   R +VL ++  
Sbjct: 1   MSCAPSTKIYGVSQPISTNAPTKSDFKLTDSLNESLHQFECYESKEESMTRIKVLSKLNA 60

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDF 126
           + K W+K LT  R  +   +     LI +FGSYRLGVH  GADIDAL + P +V+R  DF
Sbjct: 61  LVKQWIKTLTAQRIPNGHELNAGGKLI-SFGSYRLGVHNSGADIDALVIAPRHVAR-LDF 118

Query: 127 FFILHNILAEMEEVTELQPVLDAHVPVM 154
           F     +L E   V  L  V +A VP+M
Sbjct: 119 FTSFKKMLLENSSVKNLACVENAFVPIM 146



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 15/167 (8%)

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 355
           VWDPR N  D+ H MPIITPA+P  NS++NVS STL ++ ++ +    IC+++    A W
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSATW 215

Query: 356 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
           + LFE   FF  YR+++ + +   + +      G+ ESR+RQL  ++ER+   KL  H  
Sbjct: 216 NNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AHIN 268

Query: 416 PHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSI 462
           P ++           +F+GL     E+++  +  D+   +E FK ++
Sbjct: 269 PKKFKSVQNA---SVWFLGL-----ELIENVKNLDLTAEIEGFKKNV 307


>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
          Length = 432

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 14/185 (7%)

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y+
Sbjct: 1   MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60

Query: 370 NYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSK 424
           +Y+ +   A      L W G VES++R L   +E++ +  L     Q  P P E  D  K
Sbjct: 61  HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPD--K 118

Query: 425 PCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHI 479
                 + +GL  K  E   E    D+   ++ F     + +IN  MF +  M+I   H+
Sbjct: 119 EEFRTMWVIGLVFKKTE-NSENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHV 176

Query: 480 RRKQI 484
           +RKQ+
Sbjct: 177 KRKQL 181


>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
 gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
          Length = 1034

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 162/360 (45%), Gaps = 55/360 (15%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHV 151
           L+   GS R+GV    +D+D +C+ P  ++  E F   + N LA + + ++L  V  A V
Sbjct: 631 LLQQIGSGRIGVQSTHSDLDLICIIPVPLT-GETFLKQVQNRLAGLCDRSQL--VKSARV 687

Query: 152 PVMKFKFDGLSIDLLYAS-ISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           PV++ + +G+++DLL A+ + +  + E L  +        D  +  +  G   AD I+ +
Sbjct: 688 PVLRMEIEGVAVDLLSATTMGQSQIIEPLSEAARPFF---DAASWSAAVGILEADLIVDI 744

Query: 211 V-PNV--EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA--------------RV 253
           V P++  + F   LR ++ WAK R ++ N  GFLG  +WALL A              R+
Sbjct: 745 VSPHLSWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSPRL 804

Query: 254 CQ-----------------LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV 296
                              L  + +  +L++ FF++ +   W  P+ L        G   
Sbjct: 805 LHSQENDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPIALTE------GGKQ 858

Query: 297 WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWS 356
           +  RK+R       P+IT   PC NS+ NV+ ST  ++  +   G  I EEV      W+
Sbjct: 859 YPVRKSR----EWFPVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAEEVLAGNTAWT 914

Query: 357 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 416
            LFE     E    +L + + +A   +L    GW+E     L + +E+    KL  H  P
Sbjct: 915 TLFESADLPEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQ----KLNIHVRP 970


>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
            thermophilum DSM 1495]
          Length = 1213

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 181/421 (42%), Gaps = 69/421 (16%)

Query: 38   LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE-----LTRLRGYSDQMVEDANAL 92
            +EK L++ G+  S+EE+  R+Q +  +R    D +       L+R +         A  +
Sbjct: 613  VEKALIQLGVIPSQEEEATRKQAVDLLRNTITDVIASTVPSGLSRFQ---------APIV 663

Query: 93   IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM--EEVTELQPVLDAH 150
            I   GSY LGV    +D+D LC+GP      + FF ++   L ++  +++  ++ V    
Sbjct: 664  IVPVGSYGLGVWTSSSDLDVLCIGPFSA---QTFFALVTRALRKVPPQDIKIIRRVRANT 720

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ +  G+  DL     + +  R  + L  +    + D+   ++  L   R  D + 
Sbjct: 721  GTMLELEIHGIKTDLQCCPATTIAERWGDVLRTAPNDPVWDLSPQSLLKLKAVRDMDYLR 780

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN--------A 260
            + VPN+  F    R ++ WAK RGVY++  GFL G+  A+LVARV +L  N         
Sbjct: 781  RTVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAILVARVAKLLANNPDVKTPIT 840

Query: 261  VPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM-----PIITP 315
            V   LV+ FF  Y  + W             L F   DP  +R    ++      PI   
Sbjct: 841  VEDFLVT-FFTHYASFPW----------STHLAF---DPFFHRNRLPYNRVPFREPIAIL 886

Query: 316  AY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY---------LF 364
             Y  P +N++   S S+ R + D+F+        V  N   W+                F
Sbjct: 887  GYFPPALNTAAAASPSSARTLADEFRRAGEAL--VSGNVTDWAFFLSGTGSNGTTGVQEF 944

Query: 365  FESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
              +Y+ Y+++D     +  +     L   GW+ESRL  L + I R T G L    +P  +
Sbjct: 945  LSAYKTYIRLDASYWGLSRSRGSQFL---GWLESRLVSLLVDISRRTNGVLHARIWPARF 1001

Query: 420  V 420
            V
Sbjct: 1002 V 1002


>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
 gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
          Length = 1297

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 183/410 (44%), Gaps = 56/410 (13%)

Query: 65  RQIAKDWVKELTRLRGYSDQMVEDANALIFTF-----GSYRLGVHGPGADIDALCVGPSY 119
           RQ A + +KEL   R   D  +     L   F     GSY  GV    +D+D L +G   
Sbjct: 608 RQEAFELIKELVNRR---DANLPAGTRLDLLFEVVAVGSYGFGVWNSSSDMDILVIG--Q 662

Query: 120 VSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR-- 176
           VS    F  ++  +  A   +V  L+ V  A   +++ +  G+ +DL Y + +R+V    
Sbjct: 663 VSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQYCAATRVVESWP 722

Query: 177 EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN 236
           + L++       D+   ++  LN  R    + + +P++  F    R +K WA+RRG+YS+
Sbjct: 723 QALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSS 782

Query: 237 VTGFLGGVNWALLVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAEL 292
             G+LGG++  LL+AR+C L      ++    +++ FF+ Y  + W   V          
Sbjct: 783 KLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQV---------- 832

Query: 293 GFSVWDPRKNRRDKTHHMP------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE 346
              V+DP   +    +  P      I++   P +N +   S  + R ++ +FQ  + +  
Sbjct: 833 ---VYDPSFYKSPPRYFRPQREPLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLS 889

Query: 347 EVELNKAQWSALFEPYL----FFESYRNYLQVDIV----AANADDLLAWKGWVESRLRQL 398
           + ++   Q +   E       F +SYR+Y +V++     AA    +L   GW+E R   L
Sbjct: 890 QQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLV--GWLEWRCVSL 947

Query: 399 TLMIERDTYGKLQCHPYPHEYVD------TSKPCAHCAFFMGLQRK--PG 440
            + I R  +  +    +P  + D      T+K    C + +GL R+  PG
Sbjct: 948 LVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQGC-YLIGLTRESTPG 995


>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
          Length = 1195

 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 205/474 (43%), Gaps = 76/474 (16%)

Query: 15  QYGVTKPISMAGPTEADMQRNREL---EKFLVEAG-------------LYESKEEDEKRE 58
            +GV   + + GP    ++  + L   EK  +  G              + S EE  +R+
Sbjct: 550 HWGVRATVKLNGPRSGGLESEKALITVEKAPLNLGGIDGLKGWLKGYLAFPSNEEITQRQ 609

Query: 59  QVLGRIRQIAKDWVKEL---TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCV 115
           +    I+++       L   TRL    D + E     +   GSY  GV    +D+D L +
Sbjct: 610 EAFELIKELVNRRDANLPAGTRL----DLLFE-----VVPVGSYGFGVWNSSSDMDILVI 660

Query: 116 GPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV 174
           G   VS    F  ++  +  A   +V  L+ V  A   +++ +  G+ +DL Y + +R+V
Sbjct: 661 G--QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQYCAATRVV 718

Query: 175 VR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRG 232
               + L++       D+   ++  LN  R    + + +P++  F    R +K WA+RRG
Sbjct: 719 ESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRG 778

Query: 233 VYSNVTGFLGGVNWALLVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAID 288
           +YS+  G+LGG++  LL+AR+C L      ++    +++ FF+ Y  + W   V      
Sbjct: 779 IYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQV------ 832

Query: 289 EAELGFSVWDPRKNRRDKTHHMP------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGN 342
                  V+DP   +    +  P      I++   P +N +   S  + R ++ +FQ  +
Sbjct: 833 -------VYDPSFYKSPPRYFRPQREPLVILSQHQPKVNVARAASIPSTRTLVQEFQRAD 885

Query: 343 TICEEVELNKAQWSALFEPYL----FFESYRNYLQVDIV----AANADDLLAWKGWVESR 394
            +  + ++   Q +   E       F +SYR+Y +V++     AA    +L   GW+E R
Sbjct: 886 KLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLV--GWLEWR 943

Query: 395 LRQLTLMIERDTYGKLQCHPYPHEYVD------TSKPCAHCAFFMGLQRK--PG 440
              L + I R  +  +    +P  + D      T+K    C + +GL R+  PG
Sbjct: 944 CVSLLVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQGC-YLIGLTRESTPG 995


>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
          Length = 351

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 34/263 (12%)

Query: 278 WPNPVML------CAIDEAELGFSVWDPRKNRRDKT------HHMPIITPAYPCMNSSYN 325
           WP+PV+L       A D   L   VWDPR    D+       H MPI+TPA+P  NS++N
Sbjct: 37  WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96

Query: 326 VSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 385
           V+ S+L+++M++ + G     ++   KA WSALFE   FF  Y+++L +  ++A   D L
Sbjct: 97  VTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDEL 156

Query: 386 AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY--------VDTSKPCAHC-AFFMGLQ 436
            W G VES++R L   +ER    ++ CH +   Y        V  S     C  +F+GL 
Sbjct: 157 VWCGLVESKIRFLIASLERRESIRV-CHVHTKYYQPRNDPFPVQVSLQNPRCRLWFIGLD 215

Query: 437 RKPGEVVQEGQQFDIRGSVEEFKLSINMYM----FWKPGMEICVSHIRRKQIPPYV---- 488
                     ++ DI+  V+ F   +N        +  GM +   ++R+ ++  ++    
Sbjct: 216 LNKT----VSRKIDIQHEVQSFMDLLNSMATTQNIYVEGMSVIPHYLRKAELVKWLKMED 271

Query: 489 FPEGYKRTRHPRLASQQRSSENG 511
              G K  +  R+A+ Q     G
Sbjct: 272 LTRGKKAPKRRRIATSQNQQATG 294


>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 1168

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 190/427 (44%), Gaps = 50/427 (11%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL---TRLRGYSDQMVEDANALI 93
           +L + L +   + S EE  +R++V+  IRQ+       L   TRLR          +  +
Sbjct: 559 QLMQSLWDHNAFPSPEEIRQRQEVVDLIRQVVNQRDPNLPTDTRLR---------FSFAV 609

Query: 94  FTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAHVP 152
              GSY LGV    +DID L +G   +S    F  ++  +   +  E+  L+ V  A   
Sbjct: 610 VPVGSYGLGVWNSSSDIDLLVIG--QLSARTFFALMVAKLRKAIHGEIKILRKVKAASGV 667

Query: 153 VMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           +++ +  G+ +DL Y + SR+V    + LD+ D      +   ++  LN  R    + + 
Sbjct: 668 MLELEARGVRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLLKLNPLRDMHYLQRT 727

Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL-YPNAVP---SMLV 266
           +P++  F +  R +K WA+RRGVYS   G+LGG++  LL++ VC+L +  A P   + ++
Sbjct: 728 IPDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLSFQKAGPLSAADMI 787

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
             FFR Y  ++W   ++       + GF    PR  R  +   + I+T   P +N +   
Sbjct: 788 CTFFRHYAQFQWDRTIVY------DPGFYKTAPRYFRTSR-EPIVILTQNTPKVNVARAA 840

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-------FFESYRNYLQVDI--- 376
           S  + R +  +F+  +      E+    W+ L            F  SY +Y +V++   
Sbjct: 841 SLPSARTLEQEFKRMDRQLASPEIT---WAGLLGAAGSSSGVEDFLTSYPSYAKVNVQYW 897

Query: 377 -VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA-----HCA 430
              A    LL   GW+E R   L + I+R  +  L    +P  + D  +           
Sbjct: 898 GAGAAKGRLLV--GWLEWRCVSLLVDIQR-RFPDLHARIWPARFTDMEEASESEGEYQGC 954

Query: 431 FFMGLQR 437
           F +GL R
Sbjct: 955 FLIGLTR 961


>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
          Length = 363

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 140/297 (47%), Gaps = 18/297 (6%)

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVAD- 205
           + VP+M  + DG+S+D+ +AS+     +  E LDI    +L +V E T+ SL GCR  + 
Sbjct: 6   SFVPIMTMEIDGVSVDISFASLPSYPFKLPEFLDILSNDILRNVSEHTLHSLTGCRCTEF 65

Query: 206 --QILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 263
             Q L+    ++ F  T   ++F+ K+  +Y NV G+LGGVN  +L+A    L  N   +
Sbjct: 66  VIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLAST-NLLENDFLT 124

Query: 264 MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV--WDPRKNRRDKTHHMPIITPAYPCMN 321
                F  V          M   +   ELGF    W  + +       + ++TP YP MN
Sbjct: 125 NTFHFFHFVADHLGSEIIAMTPQLSFPELGFDEENWSDKPSNFSNHDSLVLLTPTYPRMN 184

Query: 322 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF---EPYLFFESYRNYLQVDIVA 378
           ++  +S S+L+ +  Q      + E+++      S L    EPY FFE +  Y +V + A
Sbjct: 185 TARTISRSSLQFIRSQ---ARRVYEKIKSYVDGESTLLQMVEPYQFFEGFPIYFEVLVSA 241

Query: 379 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGL 435
           +   +   W G VES++R L   +       +  +P P   V  S   A C F++GL
Sbjct: 242 SANSEFKDWLGLVESKIRYLVFFLSLRI-ENVALNPNP--IVSKSNSNAAC-FYIGL 294


>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
          Length = 108

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/104 (50%), Positives = 69/104 (66%)

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQW 355
           VWDPR N  D+ H MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+W
Sbjct: 1   VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 60

Query: 356 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLT 399
           S LFE   FF+ Y++Y+ +   A      L W G VES++R L 
Sbjct: 61  SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILV 104


>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
            42464]
 gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
            42464]
          Length = 1260

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 153/356 (42%), Gaps = 44/356 (12%)

Query: 90   NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
              ++   GSY LGV    +DID LC+GP   S    F      +     +  +L   + A
Sbjct: 682  TVVVVPVGSYALGVWTSSSDIDVLCIGP--FSSNTFFALASQRVRKAAAQGIKLLRRVRA 739

Query: 150  HVPVM-KFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
            H   M + +  G+ +DL Y   + +  R  + L I     +  +   T+  L   R AD 
Sbjct: 740  HTGTMLELEVHGVKVDLQYCPAASVAERWPDVLRIPSSDPVWSLSAQTLSKLKAIRDADY 799

Query: 207  ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN-----AV 261
            + + VP++  F    R +K WAK RG+Y+   GFL G+  ++L+ARV +L          
Sbjct: 800  LRRSVPDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGAPPT 859

Query: 262  PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR----DKTHHMPIITPAY 317
            P  L+  FF  Y  + W           A+L F   DP  +RR     +T   P+    Y
Sbjct: 860  PEALIVTFFHHYAAFDW----------SAQLAF---DPLFHRRRLPYSRTAREPLAILGY 906

Query: 318  --PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL----FFESYRNY 371
              P +N++   S  + + +  +F+  +          A WS+L         F  +Y++Y
Sbjct: 907  FPPALNTALAASVPSTKTLAAEFRRASDALRSATDPPASWSSLLSVSAGRDEFLAAYKSY 966

Query: 372  LQVDI------VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
            +++D+      ++  A  L    GW+ESR   L + + R   G L    +P  +V+
Sbjct: 967  VKLDVQYWGLSLSRGAQFL----GWLESRCVMLLVDLHRRAPG-LHVRMWPARFVE 1017


>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
          Length = 1241

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 184/408 (45%), Gaps = 42/408 (10%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           ++ P S+A P  A++    +L+  L E  +  +KE+  KR  VL  +R +          
Sbjct: 606 ISIPSSLATP--ANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVD 663

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM 137
             G+S+   + A  L+   GSY LGV  P +D+D L +GP      + FF I    L   
Sbjct: 664 ENGHSNNEPDIAMVLV-PVGSYGLGVWSPSSDVDCLSIGPI---SSKIFFAIAEQRLRRA 719

Query: 138 EE--VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV---VREDLDISDMSVLNDVDE 192
            +  +  L+ V  A   +++ + +G+  DL Y   +R+V    R  L   D  +  D+  
Sbjct: 720 ADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSY 778

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             +  L   R  D I + +P++  F T  R +  WAK RGVY +  G+LGG++  ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838

Query: 253 VCQLYPNAV---PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH 309
           V +L+   V    + ++ RFF+ Y  + W +  +          F    PR  RR     
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVFDPF------FFESTPRY-RRYANEP 891

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL------ 363
           M I+T   P +N +   +  + R ++++ +    +  + ++    WS L    +      
Sbjct: 892 MVILTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDMT---WSKLLNSTVSTLEPS 947

Query: 364 --FFESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIER 404
             F  +Y +Y+++      I  A    LL   GW+ESR  +L   I+R
Sbjct: 948 EEFLTAYSSYIKIHVQYWGISLAKGKTLL---GWLESRCVRLLNDIDR 992


>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 1040

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 174/382 (45%), Gaps = 40/382 (10%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFT-F 96
           LE  L E+ +  ++ +  KR+ V+  +R +         R    S    E   A++    
Sbjct: 615 LELCLRESMMLPTEADVSKRQSVVDLLRDVITQ--GPAARAGDGSGNNPEPNIAMVLVPV 672

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE--VTELQPVLDAHVPVM 154
           GSY LGV  P +DID L +GP      + FF +    L +  +  +  L+ V  A   ++
Sbjct: 673 GSYGLGVWSPSSDIDCLVIGPI---SSKTFFAVAEKRLRKATDLGIRILRRVKAATGTML 729

Query: 155 KFKFDGLSIDLLYASISRLV---VREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLV 211
           + + +G+  DL Y   SR+V    R  L   D S    +    +  L   R  D I + +
Sbjct: 730 ELEVEGIKCDLQYCPASRVVEAWQRISLLPPDDSTFY-LSSQALTKLQAFRDVDYIRRSI 788

Query: 212 PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL--YPNAVPSM-LVSR 268
           P++  F    R +  WAKRRG+Y    G+LGG++  ++++RVC+L        SM ++ R
Sbjct: 789 PDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMMLSRVCKLSCRKGGATSMDMICR 848

Query: 269 FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVST 328
           FF+ YT + W   + LC  D +       D  + RR     M I+T   P +N + + S 
Sbjct: 849 FFKYYTNFDWEREI-LC--DPSFFK----DAPRYRRYANEPMVILTIHTPLVNIARSASK 901

Query: 329 STLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-------FFESYRNYLQVDI----- 376
           ++ R ++ + Q  + +    +++   WS L            F ++Y +Y+++ +     
Sbjct: 902 ASTRTIIKELQRMDELISTPDMS---WSGLVGNITASDSSQEFLKTYTSYIKIHVQYWGM 958

Query: 377 VAANADDLLAWKGWVESRLRQL 398
           + A    LL   GW+ESR  +L
Sbjct: 959 ILAKGSTLL---GWLESRCCRL 977


>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1151

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 188/429 (43%), Gaps = 56/429 (13%)

Query: 42  LVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRL 101
           L   G++ + E+  + +      RQI       L  L    D +  +   ++   GSY L
Sbjct: 539 LAAHGMFPTDEQTRQHQDAFETFRQIL------LGTLDATEDSIQPEIPFVMVPVGSYAL 592

Query: 102 GVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMKFKFDG 160
           GV    +DID LC+G   +S +  F      I+ ++   V  L+ V  +   +++   +G
Sbjct: 593 GVWTSDSDIDCLCIGT--ISSKTFFKLARQRIIKSDNRGVRILRKVEASTGTMLELSVNG 650

Query: 161 LSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFC 218
           + +DL Y   +++V R  E  +I     + ++   ++R L   R    I + +P++  F 
Sbjct: 651 VLMDLQYCPATQVVERWSEFRNIPASDPIFNLSLLSLRKLKPYRDLLYIQRTLPSLSSFR 710

Query: 219 TTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP----NAVPSMLVSRFFRVYT 274
              RC+K WA +RG+YS   GFLGGV+  L+++ +C+       +A  + LV+ FF  Y 
Sbjct: 711 LAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASAADLVTSFFHHYG 770

Query: 275 MWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVM 334
            + W N ++       ++ F    PR NR  +   M ++    P  N ++  +   L+ +
Sbjct: 771 QFDWTNEMVY------DVFFHKKRPRYNRSAR-EPMVVLGFHAPNSNIAHTSTVPGLQTL 823

Query: 335 MDQFQ-YGNTICEEVELNKAQWSALF----------EPYL----FFESYRNYLQVDI--- 376
           + +F+  G  +CE+       W A F           P L    F E+Y N+++VDI   
Sbjct: 824 VKEFKAAGERLCEQ----GMTWDAFFGLGPTLSSVSSPSLGAAGFLETYHNFVKVDIQFW 879

Query: 377 --VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA------H 428
                    L+   GWVESR   L + I + T    +   +P  + +     A      H
Sbjct: 880 GRTLTKGKSLV---GWVESRCISLIVEIHK-TLPNSEVRIWPGRFTNNETSAADESRDYH 935

Query: 429 CAFFMGLQR 437
             + +GL +
Sbjct: 936 GCYLIGLSK 944


>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
          Length = 508

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 44/169 (26%)

Query: 277 RWPNPVMLCAIDE--AELGFS------VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVST 328
           +WP P++L  I+E   EL FS      VW+PR    D+ H MPIITP+YP M S++NV+ 
Sbjct: 77  KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134

Query: 329 STLRVMMDQF------------------QYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
           ST+ VM D+F                  + G+ I E++   +A+WS LF  + FF+ YR 
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHDFFQKYRY 194

Query: 371 YLQVDIVAANADDLLAW----------------KGWVESRLRQLTLMIE 403
           YLQ+   +  A+D L W                 G VESRLRQL + +E
Sbjct: 195 YLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLE 243


>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
           Silveira]
          Length = 1241

 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 181/405 (44%), Gaps = 42/405 (10%)

Query: 21  PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRG 80
           P S+A P  A++    +L+  L E  +  +KE+  KR  VL  +R +            G
Sbjct: 609 PSSLATP--ANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVEENG 666

Query: 81  YSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE- 139
           +SD   + A  L+   GSY LGV  P +D+D L +GP      + FF I    L    + 
Sbjct: 667 HSDNEPDIAMVLV-PVGSYGLGVWSPSSDVDCLSIGPI---SSKIFFAIAEQRLRRAADS 722

Query: 140 -VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV---VREDLDISDMSVLNDVDEPTV 195
            +  L+ V  A   +++ + +G+  DL Y   +R+V    R  L   D  +  D+    +
Sbjct: 723 GIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSYQAL 781

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
             L   R  D I + +P++  F    R +  WAK RGVY +  G+LGG++  ++++RV +
Sbjct: 782 TKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFK 841

Query: 256 LYPNAV---PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           L+   V    + ++ RFF+ Y  + W +  +          F    PR  RR     M I
Sbjct: 842 LFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPF------FFESTPRY-RRYANEPMVI 894

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL--------F 364
           +T   P +N +   +  + R ++++ +    +  + ++    WS L    +        F
Sbjct: 895 LTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDMT---WSKLLNSTVSTLEPSEEF 950

Query: 365 FESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIER 404
             +Y +Y+++      I  A    LL   GW+ESR  +L   I+R
Sbjct: 951 LTAYSSYIKIHVQYWGISLAKGKMLL---GWLESRCVRLLNDIDR 992


>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
 gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
          Length = 1206

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 187/415 (45%), Gaps = 39/415 (9%)

Query: 19  TKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRL 78
           T P ++A    +D+  N  L  F     +  S+ E   R+Q+   IR   K       + 
Sbjct: 584 TGPRTLA----SDIHFNTILHDF----DMLPSEVEIAHRQQMFELIRSAVKQ------QA 629

Query: 79  RGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEM 137
            G S +   + + ++   GSY  GV  P +DID L +G   +S +     ++  +   E 
Sbjct: 630 IGTSVETRLNISFVVVPVGSYASGVWDPSSDIDCLVIGS--ISPKTFMALMVQKLRRPEW 687

Query: 138 EEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTV 195
           +E+  L+ V      +++ +  G+  DL Y + + +     + L +       D+   ++
Sbjct: 688 QEIHILRKVKATSGTMLEIQAGGVRFDLQYCAATSVTDSWPKALTLPSSDPTFDLPMQSL 747

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
             LN  R  + + + +P++  F    R +K WAK RG+YS+  G+LGG++  LL+ARVC+
Sbjct: 748 LKLNSHRDLEYLQRTIPDLATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLARVCK 807

Query: 256 LYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP 311
           L      +     ++S FF  Y  + W N ++       E  F    P+ +R  +   M 
Sbjct: 808 LSFREAGATSVSDIISDFFFYYENFDWKNDMVY------ETTFYTGTPKYHRLSR-EPMV 860

Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEP---YLFFESY 368
           I++   P +N ++  + S++  +  +F+    +  EV    A W  + +P     F E+Y
Sbjct: 861 ILSIHPPKVNVAHASTVSSVHTLEQEFKRAAQLISEV---GATWKNIADPSGVVQFLEAY 917

Query: 369 RNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
            +Y++VD+   A  A    A  GW+E R   L + I R  +  +    +P  + D
Sbjct: 918 SSYIKVDVHYWAKAAAKGRALFGWLEFRCVSLLVNINRG-FPDIHARIWPARFTD 971


>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
          Length = 973

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 167/379 (44%), Gaps = 57/379 (15%)

Query: 65  RQIAKDWVKELTRLRGYSDQMVEDANALIFTF-----GSYRLGVHGPGADIDALCVGPSY 119
           RQ A + +KEL   R   D  +     L   F     GSY  GV    +D+D L +G   
Sbjct: 608 RQEAFELIKELVNRR---DANLPAGTRLDLLFEVVPVGSYGFGVWNSSSDMDILVIG--Q 662

Query: 120 VSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR-- 176
           VS    F  I+  +  A   +V  L+ V  A   +++ +  G+ +DL Y + +R+V    
Sbjct: 663 VSPRTFFALIIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQYCAATRVVESWP 722

Query: 177 EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN 236
           + L++       D+   ++  LN  R    + + +P++  F    R +K WA+RRG+YS+
Sbjct: 723 QALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSS 782

Query: 237 VTGFLGGVNWALLVARVCQLYPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAEL 292
             G+LGG++  LL+AR+C L      ++    +++ FF+ Y  + W   V          
Sbjct: 783 KLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQV---------- 832

Query: 293 GFSVWDPRKNRRDKTHHMP------IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE 346
              V+DP   +    +  P      I++   P +N +   S  + R ++ +FQ  + +  
Sbjct: 833 ---VYDPSFYKSPPRYFRPQREPLVILSQHQPKVNVARAASIPSTRTLVQEFQRADKLLS 889

Query: 347 EVELNKAQWSALFEPYL----FFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQ 397
           + ++   Q +   E       F +SYR+Y +V++      A     L+ W  W     R 
Sbjct: 890 QQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLVGWLEW-----RC 944

Query: 398 LTLMIERDTYGKLQCHPYP 416
           ++L++ R        HP P
Sbjct: 945 VSLLVGR-------LHPLP 956


>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 1241

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 181/405 (44%), Gaps = 42/405 (10%)

Query: 21  PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRG 80
           P S+A P  A++    +L+  L E  +  +KE+  KR  VL  +R +            G
Sbjct: 609 PSSLATP--ANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVEENG 666

Query: 81  YSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE- 139
           +SD   + A  L+   GSY LGV  P +D+D L +GP      + FF I    L    + 
Sbjct: 667 HSDNEPDIAMVLV-PVGSYGLGVWSPSSDVDCLSIGPI---SSKIFFAIAEQRLRRAADS 722

Query: 140 -VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV---VREDLDISDMSVLNDVDEPTV 195
            +  L+ V  A   +++ + +G+  DL Y   +R+V    R  L   D  +  D+    +
Sbjct: 723 GIRILRKVKAATGTMIELEVNGIKCDLHYCPAARVVEGWQRISLSPPDDPIF-DLSYQAL 781

Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
             L   R  D I + +P++  F    R +  WAK RGVY +  G+LGG++  ++++RV +
Sbjct: 782 TKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFK 841

Query: 256 LYPNAV---PSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
           L+   V    + ++ RFF+ Y  + W +  +          F    PR  RR     M I
Sbjct: 842 LFCGEVRVTSTDMIYRFFQYYADFDWEHETVFDPF------FFESTPRY-RRYANEPMVI 894

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL--------F 364
           +T   P +N +   +  + R ++++ +    +  + ++    WS L    +        F
Sbjct: 895 LTINVPLINVA-RATAGSARTIVEELRRMAQLMSDPDMT---WSKLLNSTVSTLEPSEEF 950

Query: 365 FESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIER 404
             +Y +Y+++      I  A    LL   GW+ESR  +L   I+R
Sbjct: 951 LTAYSSYIKIHVQYWGISLAKGKMLL---GWLESRCVRLLNDIDR 992


>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 904

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 31/207 (14%)

Query: 232 GVYSNVTGFLGGVNWALLVARVCQ---LYPNAVPSM-----------LVSRFFRVYTMWR 277
           G+YSN  GFLGG +W++LVA VC+   LY  +  +            L++ FF VY  W 
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752

Query: 278 WPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQ 337
           W  PV +        G + + P  ++ DK   MPI+TP  P  NS+ NV+ STL  M  +
Sbjct: 753 WQQPVAITP------GSARYKP-GHKSDK---MPIVTPTPPFNNSARNVARSTLTEMQQE 802

Query: 338 FQYGNTICEEVELN-KAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLR 396
           F     I +  + N +A  + L +P  FF+ Y  YL V++ + ++D++    GW+ESRL 
Sbjct: 803 FFRAFDITQAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRLI 862

Query: 397 QLTLMIERD--TYGKLQCHPYPHEYVD 421
            L   +E++  TY +    P+P  +V+
Sbjct: 863 ALIFDLEKNPQTYAR----PFPGTFVN 885


>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
 gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
          Length = 91

 Score =  104 bits (259), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/65 (69%), Positives = 53/65 (81%)

Query: 199 NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
           +G RVAD+IL+LVP+   F T LRC+K WAK RGVYSNV GFLGG+ WA+LVARVCQLYP
Sbjct: 9   HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68

Query: 259 NAVPS 263
           N  P+
Sbjct: 69  NTSPA 73


>gi|449673865|ref|XP_004208051.1| PREDICTED: poly(A) polymerase alpha-like, partial [Hydra
           magnipapillata]
          Length = 144

 Score =  103 bits (258), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/131 (37%), Positives = 80/131 (61%), Gaps = 1/131 (0%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           KQYG+T PI+++GP E D +  + LE+ L + G++E++E+ + R  VL ++ ++A +W+ 
Sbjct: 15  KQYGITSPINLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMVVLEKLNKLALEWIV 74

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
           + +  +   + +       IFTFGS+RLGVH  GADID L V P ++ R  DFF   +  
Sbjct: 75  KTSIAKNMPESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIER-ADFFGSFYEF 133

Query: 134 LAEMEEVTELQ 144
           L   EE  +L+
Sbjct: 134 LKNREETKDLR 144


>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
            18188]
          Length = 1251

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 190/444 (42%), Gaps = 68/444 (15%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAH 150
            ++ T GSY LGV    +D+D LCVG   +S +  F   L  +    E +V  L+ V  A 
Sbjct: 680  VVTTVGSYGLGVWTDSSDVDCLCVGS--ISSKVFFELTLQRLKKGAEWDVKILRKVKAAT 737

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ + + +  DL Y   + +  R  E   +   S L D+    +  L   R    + 
Sbjct: 738  GTMLELEINSVKFDLQYCPAAAVAERWLEVPHLPRSSPLFDLALLPLMKLQPYRDQAYLQ 797

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM---- 264
            + VPN   F    R +K WAK RG+YS+  G+LGG++  +++++V +L P+  P+     
Sbjct: 798  RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAAD 857

Query: 265  LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH------MPIITPAYP 318
            ++  FF  Y  + W   VM             +DP  +++   +H      M I+T   P
Sbjct: 858  ILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAP 904

Query: 319  CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY----------LFFESY 368
             MN + + S  + R ++D+ +  + +  E   N A+   +               F  SY
Sbjct: 905  VMNVARSASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964

Query: 369  RNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 420
             +Y+++++       A    L+   GW+ESR   L   + R  +  +Q   +P  +    
Sbjct: 965  NSYIKINVQYWGLSLAKGSSLV---GWLESRCLVLLADLHR-KFPDIQTRIWPARFTQIE 1020

Query: 421  --DTSKPCA-----HCAFFMGLQRK-----PGEVVQEGQQF----DIRGSVEEFKLSINM 464
              D S P          + +GL +      P   + +  +      ++ S+++F  +I+ 
Sbjct: 1021 DHDDSTPAQEEREYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHN 1080

Query: 465  Y--MFWKPGMEICVSHIRRKQIPP 486
            Y   F      + VSH+++  + P
Sbjct: 1081 YKKYFDSASAWVDVSHVKQGNLGP 1104


>gi|385300970|gb|EIF45209.1| poly polymerase [Dekkera bruxellensis AWRI1499]
          Length = 122

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 79/118 (66%), Gaps = 1/118 (0%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWV 72
           PK YGVT P+S+A P+  +++ N  + + L     +E+++  +KR +VL  ++ I +++V
Sbjct: 6   PKHYGVTPPVSIASPSPEEVKMNDAMIEELRNQNSFETEDGVQKRRKVLATLQTIVQEFV 65

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
             ++R +  S+ M +DA   +FTFGSYRLGV+GPG+DID L V P +V++ EDFF + 
Sbjct: 66  YTVSRKKNMSEGMSKDAGGKLFTFGSYRLGVYGPGSDIDTLVVVPKHVTK-EDFFTVF 122


>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
 gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
          Length = 265

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 28/212 (13%)

Query: 239 GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVML------CAIDEAEL 292
           GF  G++ A+L A VC+ +P+A  S L + FF+ +  W W  PV L      C   E  L
Sbjct: 12  GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEGRL 71

Query: 293 GFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK 352
                            MPI+ P  P    +  V+  +L+ + ++   G  +  +   + 
Sbjct: 72  -----------------MPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRHD 114

Query: 353 AQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 412
            QWS LFEP+ + + Y+ +L++ + A    +L  W GWV+SR R L L +ER     ++C
Sbjct: 115 FQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIEC 171

Query: 413 HPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQ 444
            P P E VD +    +  F+ GL   P  ++Q
Sbjct: 172 DPCPSEEVDHTDNDPNVVFYWGL--IPKRIIQ 201


>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
           24927]
          Length = 1237

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 157/363 (43%), Gaps = 57/363 (15%)

Query: 97  GSYRLGVHGPGADIDALCVG----PSYVSREEDFFFILHNILAEMEEVT-------ELQP 145
           GS+ LG +   +D D L +G    P +    +          A+   +T       ++  
Sbjct: 627 GSFGLGTYTSTSDTDILAIGSISTPLFWRIAKQRIKRFRGKAADSSSLTSSDALSVKIVR 686

Query: 146 VLDAHVPVMKFKF-DGLSIDLLYASISRLVVREDLDISDMSVLN----DVDEPTVRSLNG 200
            +DA +P++     D + IDL Y +   + V  + D      LN    ++  PT++ L  
Sbjct: 687 YVDATIPMLILLIGDKIRIDLQYTTA--VSVLSNFDTIPFQPLNSPLWNLTVPTLKKLQA 744

Query: 201 CRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY-PN 259
            R    +L  +PN+  +    R +K WA+++GVYS+  GF GGV+ +LL+ARV  L  P 
Sbjct: 745 WRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGGVHISLLLARVAMLLPPT 804

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
           A  S L++ FF  Y+  +W + V+        L +     ++  RDK   M I+T   P 
Sbjct: 805 ATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRY-----QRATRDK---MVILTINTPV 856

Query: 320 MNSSYNVSTSTLRVMMDQFQ------------------YGNTICEEVELNKAQWSALFEP 361
           +N + N +  T+  +  + +                  +G+   +E+ +   +       
Sbjct: 857 INVAANATIHTVHTLSSELEKAAAKFELDATFSDVVGSFGDDTSKEIPIGVNE------- 909

Query: 362 YLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY 419
             F   Y  Y++VD+     N     A  GWVESRL  L + + R T G L    +P  +
Sbjct: 910 --FLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELGRQTPG-LDARIWPGRF 966

Query: 420 VDT 422
            +T
Sbjct: 967 HET 969


>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
 gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
          Length = 602

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 192/468 (41%), Gaps = 103/468 (22%)

Query: 88  DANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVT----EL 143
           D + ++  FGS  + +  P +DID + V  S V R   +   +  +L EME       + 
Sbjct: 93  DRDPILLVFGSTLMEITTPTSDIDTV-VLVSDVKRSA-YMKRVQKVLTEMEPFRSYCDDF 150

Query: 144 QPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVL---------------- 187
             + D+ VP +K  + G  +D+ +A +   V++E  D     V                 
Sbjct: 151 SLLADSLVPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQAEVHRVCTAGLLEPEGSAAA 210

Query: 188 ----NDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 243
               + VD+ T+RSLNG RV   +LK  P +  +   LR +K WAK RG+YSNV G+ GG
Sbjct: 211 DWSNSLVDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGG 270

Query: 244 VNWALLVARVCQLYPNAVPSM----------LVSRFFRVYTMWRWPNPVMLCAIDEAELG 293
           V WA+LV++V Q   NA  +M          ++ +FF   +   W +   + A DE   G
Sbjct: 271 VTWAILVSKVMQ--DNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEILNG 328

Query: 294 F--------------------SVWD----PRKNRRD-------------KTHHMPIITPA 316
           F                     V D    P+   RD             +   M ++TP 
Sbjct: 329 FVSAGSVEMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPV 388

Query: 317 YPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKA----QWSALFEPYLFFESYRNYL 372
            P  NSS+N       VM+ +F+    +     L+      +  A+      F  Y+  L
Sbjct: 389 LPTQNSSFNALDFNRYVMVQEFKRAAHMLSLFALSPQSCPFRLGAVCARVHPFRLYKRLL 448

Query: 373 QVDI--------VAANADDLLAWK---GWVESRLRQLTLMI-----ERDTYGKLQCHPYP 416
            V++          +N D  L  K     VES++R  T +      E  TY  L+ +P+P
Sbjct: 449 FVEVEIRPENQRTLSNDDVHLLQKRIAAMVESKVRIFTKLSAAAFHEEGTY--LRLYPHP 506

Query: 417 HEYVDTSKPCAHCAFFMGL-QRKPGEVVQEGQ-----QFDIRGSVEEF 458
                 +      AF +GL  R  GE   E +     + D+R S++EF
Sbjct: 507 QVTQPWTASGGGIAFLIGLASRLTGEENIEREEETHGKVDLRPSLQEF 554


>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
 gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
          Length = 1266

 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 189/444 (42%), Gaps = 68/444 (15%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAH 150
            ++ T GSY LGV    +D+D LCVG   +S +  F   L  +    E +V  L+ V  A 
Sbjct: 680  VVTTVGSYGLGVWTDSSDVDCLCVGS--ISSKVFFELTLQRLKKGAEWDVKILRKVKAAT 737

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ + + +  DL Y   + +  R  E   +   S L D+    +  L   R    + 
Sbjct: 738  GTMLELEINSVKFDLQYCPAAAVAERWLEVPHLPRSSPLFDLALLPLMKLQPYRDQAYLQ 797

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVP----SM 264
            + VPN   F    R +K WAK RG+YS+  G+LGG++  +++++V +L P+  P    + 
Sbjct: 798  RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAAD 857

Query: 265  LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH------MPIITPAYP 318
            ++  FF  Y  + W   VM             +DP  +++   +H      M I+T   P
Sbjct: 858  ILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAP 904

Query: 319  CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY----------LFFESY 368
             MN + + S  + R ++D+ +  + +  E   N A+   +               F  SY
Sbjct: 905  VMNVARSASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964

Query: 369  RNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 420
             +Y+++++       A    L+   GW+ESR   L   + R  +  +Q   +P  +    
Sbjct: 965  NSYIKINVQYWGLSLAKGSSLV---GWLESRCLVLLADLHR-KFPDIQTRIWPARFTQIE 1020

Query: 421  --DTSKPCA-----HCAFFMGLQRK-----PGEVVQEGQQF----DIRGSVEEFKLSI-- 462
              D S P          + +GL +      P   + +  +      ++ S+++F  +I  
Sbjct: 1021 DHDDSTPAQEEREYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHN 1080

Query: 463  NMYMFWKPGMEICVSHIRRKQIPP 486
            +   F      + VSH+++  + P
Sbjct: 1081 DKKYFDSASAWVDVSHVKQGNLGP 1104


>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
          Length = 306

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 135/284 (47%), Gaps = 23/284 (8%)

Query: 190 VDEPTVRSLNGCRVADQILKLV----PNVE----HFCTTLRCLKFWAKRRGVYSNVTGFL 241
           +D+  ++S+NG R    IL+ V    PN E     F   L+ +K WA+  G+Y N  GFL
Sbjct: 1   MDQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFL 60

Query: 242 GGVNWALLVARVCQLYPNAVPSMLVSRFFRVY-TMWRWPNPVMLCAIDEAELGFSVWDPR 300
            G++ A+++A++ QL+PN   + ++ +FF+ + + W W    +       E+   +    
Sbjct: 61  SGISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQM---- 116

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
           ++++ K  H  IITPAYP  N++  V      +++ +    N   +  +     W  + E
Sbjct: 117 QSQQRKCMH--IITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQNQK--NIVWEKIVE 172

Query: 361 PYLFFESYRNYLQVDIVAANADDL---LAWKGWVESRLRQLTLMIERDTYG--KLQCHPY 415
              F   Y+ ++++D++     ++   +A K +   RL  L   ++   Y   K++  P+
Sbjct: 173 KENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIEVRPW 232

Query: 416 PHEYVDTSKPCAHC-AFFMGLQRKPGEVVQEGQQFDIRGSVEEF 458
           P  +        +C AF +GL+ K  + VQ   Q  I G  ++ 
Sbjct: 233 PIFFDKKDPDYPYCAAFLIGLKNKMHQPVQYSLQEWIVGFAKQL 276


>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
 gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
          Length = 1204

 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 169/392 (43%), Gaps = 36/392 (9%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAH 150
            ++   GSY LG  GP +DID LC+GP  +S    F   +  +  A    +  ++ V  A 
Sbjct: 648  VLIPVGSYGLGTWGPNSDIDCLCIGP--ISTSTFFSLAIQRLKKASAHGIRIMRKVKAAT 705

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ +   + +DL Y   + +  R  E   I     + D+   ++  L   R  + I 
Sbjct: 706  GMMLELQAGNIKLDLQYCPAANIAKRWQEATKIPPHDPIFDLSIYSLSKLQPFRDQEYIK 765

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN-----AVPS 263
            ++VP++  F    RC+  WAK  GVYS+  G LGG++  ++++R+ QL         VP 
Sbjct: 766  RMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIHITMMLSRLHQLLHEDIGRVTVPE 825

Query: 264  MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 323
            +L + FF  Y  + W N V+      +          K RR     M I+T   P +N +
Sbjct: 826  LL-TMFFHHYANFDWKNKVVDSPGTRS----------KYRRLLREPMVILTVHIPTINVA 874

Query: 324  YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD 383
              V+ S+LR ++  F+    +  E   + A+WS +        + +   +  +VA N+  
Sbjct: 875  RAVTASSLRTIISAFKRVEELLAE---DGARWSNVLSDTSISHNNQTGAEKFLVAYNSYI 931

Query: 384  LLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC-AHCA-------FFMGL 435
             +  + W  S  +  +L+        +    +P  +     P   H A       + +GL
Sbjct: 932  KVNVQYWGASSTQASSLLDLGKQVPSVHGRIWPARFTSIDAPNDGHTAETEYVGCYLIGL 991

Query: 436  QRKPGEVVQEGQQFD----IRGSVEEFKLSIN 463
            +R  G +     + D    ++ ++ +F  S++
Sbjct: 992  ERLQGSLSSTASKEDGKRALQATLSQFTASLH 1023


>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
 gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
          Length = 1216

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 156/357 (43%), Gaps = 42/357 (11%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAH 150
           ++   GSY LG  GP +D+D LC+G   +S    F   +  +  A    +  ++ V  A 
Sbjct: 648 VLIPVGSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRRASALGIRIVRKVKAAT 705

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
             +++ +   + +DL Y   + +  R  E   I     + D+   ++  L   R  + I 
Sbjct: 706 GIMLELQSGHIKLDLQYCPAANIAERWQEVSRIPSHDPIFDLSLHSLSKLQPYRDQEYIK 765

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL----YPNAVPSM 264
           ++VP++  F    RC+  WAK  GVYS+  G LGG++  +++ R+ QL    +       
Sbjct: 766 RMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCRLHQLIHEKFGRVTVPE 825

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
           LV+ FF  Y  + W N +++    +           + RR     M I+T   P +N + 
Sbjct: 826 LVAMFFHHYAHFDWKNNMVVSPGVQT----------RYRRSLREPMVILTVHAPTINVAR 875

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-----------LFFESYRNYLQ 373
            V+T +LR ++  F+    +  E   + A+WS +                F  +Y++Y++
Sbjct: 876 AVTTPSLRTIVSAFKRAEELMGE---DGAKWSNILNDISISHNNQTGAEKFLAAYKSYIK 932

Query: 374 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           V++         A  L+   GW+ESR  +L   ++R   G +    +P  +     P
Sbjct: 933 VNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQVLG-IHGRIWPARFTSIDAP 985


>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
 gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
          Length = 1179

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 190/454 (41%), Gaps = 70/454 (15%)

Query: 22   ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGY 81
            +  AGP    + ++ EL+  L   G++ S+EE ++R+  L  ++++          + G 
Sbjct: 598  LKRAGPC---LSQSAELDSVLASGGMFPSEEEVQQRKDALEILKRV----------VYGT 644

Query: 82   SDQMV---EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME 138
            S   V    D   +I   GSY LGV   G+DID LC+G   +S +  F      ++   +
Sbjct: 645  SSDDVTSTSDVPMIIVPVGSYALGVWTSGSDIDCLCIGT--ISSKTFFKLARQRLVKAHD 702

Query: 139  EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSL 198
            +   +   ++A+   M           L++  + L   +   I ++S+L      ++R L
Sbjct: 703  QGVRVLRKVEANTGTML---------ELWSEFAGLPASDP--IFNLSIL------SLRKL 745

Query: 199  NGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
               R    I + +P++  F    RC+K WA RRG+YS   G+LGGV+  L+++   +   
Sbjct: 746  KPYRDLLYIQRTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWAAKCLA 805

Query: 259  NAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
            +   S+    LVS FF  +  + W N +M  A       F    PR +R  +   M ++ 
Sbjct: 806  HDSGSITAPDLVSSFFHHFAHFNWTNDMMYDAF------FHKQKPRYHRSAR-EPMVVLG 858

Query: 315  PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELN------------KAQWSALFEPY 362
               P  N ++  +   L  ++ + +  +    +  +             +A  S +    
Sbjct: 859  FHAPNSNIAHTSTLPGLHTLVSEMKAADEALSDPSMTWKKFFGSTDNSPQAALSPISGAS 918

Query: 363  LFFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPH 417
             F  ++ +Y+++DI       A    L+   GWVESR   L + I +     L    +P 
Sbjct: 919  DFLSAHSSYVKIDIQFWGRTLAKGKSLV---GWVESRCLSLVVDIYK-MLPDLAVRIWPA 974

Query: 418  EYVDTSKPCA---HCAFFMGLQRKPGEVVQEGQQ 448
             + D+        H  + +GL R   E     Q+
Sbjct: 975  RFTDSDTIEGGDYHGCYLIGLSRPSNEHALNTQE 1008


>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
          Length = 1241

 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 152/339 (44%), Gaps = 34/339 (10%)

Query: 51  KEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFT-FGSYRLGVHGPGAD 109
           K + + RE  +  +R+I    ++E   + G   +    A  +I    GSY LGVHG  +D
Sbjct: 644 KTDRDAREAAITSLREIL---LQEQESVLGVGFKPSRGAIPIILAPVGSYALGVHGRDSD 700

Query: 110 IDALCVGPSYVSREEDFFFILHNILAEM--EEVTELQPVLDAHVPVMKFKFDGLSIDLLY 167
           ID LCV  S +S  + FF +    +     E    L   +D+ VPV++ K   +  DL Y
Sbjct: 701 IDCLCV--STIS-AKTFFEVARKRIRRFGGERGIRLTRFVDSKVPVLEVKVGNIKFDLQY 757

Query: 168 ASISRLVVREDLDISDMSVLND----VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRC 223
                L + E      +   ND    +    ++SLN  R  + +L+ +PN+  F    R 
Sbjct: 758 CQ--SLAIIEHWSAIPLLPPNDSVFSLPASGLKSLNSYRDTEFLLRTIPNINVFRLAHRF 815

Query: 224 LKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY----PNAVPSMLVSRFFRVYTMWRWP 279
           +K WA   GV+S+  G+LGG +  LL+AR+C+L      +   + +V  FF  Y+   W 
Sbjct: 816 IKIWALASGVFSSRFGYLGGFHITLLLARICKLADGDPKDVTAAKIVRLFFAYYSKTEWL 875

Query: 280 NPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 339
             + +C   E   G S       +R     M + +   P +N + N +  ++  +  +F+
Sbjct: 876 TEI-ICD-PEFSAGASY------QRFSREPMAVTSIYAPVVNVARNATRHSVSALTREFE 927

Query: 340 YGNTICEEVELNKAQWS--ALFEPYLFFESYRNYLQVDI 376
                  E  L+  +W   ++     F   Y +Y+++D+
Sbjct: 928 LA-----EKALDSGRWDLRSMGRENEFLAEYESYVKIDV 961


>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
 gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
          Length = 1230

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 168/379 (44%), Gaps = 50/379 (13%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAH 150
            +I   GSY LGV    +DID LC+G   +S +  F      I+ ++   V  L+ V  + 
Sbjct: 662  VIVPVGSYALGVWTSDSDIDCLCIGT--ISSKTFFKLARQRIIRSDNRGVRVLRKVEAST 719

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++   +G+ +DL Y    ++V R  E  +I     + ++   ++R L   R    I 
Sbjct: 720  GTMLELSVNGVLMDLQYCPAIQVVERWSEFRNIPASDPMFNLSLLSLRKLKPYRDLLYIQ 779

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP----NAVPSM 264
            + +P+   F    RC+K WA +RG+YS   GFLGGV+  L+++ VC+       +A  + 
Sbjct: 780  RTLPSPSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASAAD 839

Query: 265  LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
            LV+ FF  Y  + W N ++       ++ F    PR NR  +   M ++    P  N ++
Sbjct: 840  LVASFFHHYGQFDWTNDMVY------DVFFHKKRPRYNRSTR-EPMVVLGFHTPNSNIAH 892

Query: 325  NVSTSTLRVMMDQFQYGNT-ICEEVELNKAQWSALFEP--------------YLFFESYR 369
              +   L++++ +F+  +  +CE        W A F P                F E+Y+
Sbjct: 893  TSTMPGLQILVKEFKAADKRLCEP----GMTWDAFFGPGSTLSPVSSPSLGAAGFLETYQ 948

Query: 370  NYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSK 424
            N+++VDI            L+   GWVESR   L + I +    K +   +P  + D   
Sbjct: 949  NFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK-ALPKSEVRIWPGRFTDNET 1004

Query: 425  PCA------HCAFFMGLQR 437
              A      H  + + L +
Sbjct: 1005 NVADQSKDYHGCYLISLSK 1023


>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
 gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
          Length = 1217

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 179/415 (43%), Gaps = 55/415 (13%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E+   L  + L  S E+ + R+ V   + QI  +       +R  S + ++    LI   
Sbjct: 601 EIVACLENSSLLPSSEDLKSRKAVAATLAQILTE------PIRDSSGRDIKTPLVLI-PV 653

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMK 155
           GSY LG   P +D+D LC+G   +S    F   +  +  A    +  ++ V  A   +++
Sbjct: 654 GSYGLGTWSPDSDVDCLCIGA--ISSTTFFSLAIQRLRKASALGIRIMRKVKAATGMMLE 711

Query: 156 FKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPN 213
            +   + +DL Y   + +  R  E   I     + D+   ++  L   R  + I ++VP+
Sbjct: 712 LQSGNIKLDLQYCPAANIAERWQEVSRIPSNDPIFDLSLHSLSKLQPYRDQEYIKRMVPD 771

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM----LVSRF 269
           +  F    RC+  WAK  GVY++  G LGG++  ++++R+ QL    V  +    LV+ F
Sbjct: 772 MNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITMMLSRLHQLLHGKVGRVTIPELVAMF 831

Query: 270 FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 329
           F  Y  + W N +++    ++          + RR     M I+T   P +N +  V+  
Sbjct: 832 FHHYAHFDWKNSMVVSPGVQS----------RYRRSMREPMVILTVHVPTVNVARAVTAH 881

Query: 330 TLRVMMDQFQYGNTICEEVELNKAQWSALFE-----------PYLFFESYRNYLQVDI-- 376
           +LR +   F+    +  E   N A+WS +                F  ++ +Y++V++  
Sbjct: 882 SLRTIASAFKRAEELLAE---NGARWSNILRDTSISHNKETGAEKFLGAHNSYIKVNVQY 938

Query: 377 ---VAANADDLLAWKGWVESRLRQLTLMIERD---TYGKLQCHPYPHEYVDTSKP 425
                  A  L+   GW+ESR  +L   ++R     YG++    +P  +     P
Sbjct: 939 WGPSPTQASSLV---GWIESRFFRLLNDLDRQVPGVYGRI----WPARFTSKDSP 986


>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1260

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 184/410 (44%), Gaps = 47/410 (11%)

Query: 37   ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANA--LIF 94
            +L+ FL +  ++ S E+ EKR+     ++ +    ++  +          E +N   ++ 
Sbjct: 628  DLKLFLADRSIFPSPEDAEKRKAAFECLKHL----IQHGSLPESGETHETERSNFSFIVT 683

Query: 95   TFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE-VTELQPVLDAHVPV 153
              GSY LGV    +D+D LCVGP  VS    F   +  +    +  V  L+ V  A   +
Sbjct: 684  AVGSYGLGVWTNSSDVDCLCVGP--VSSRTFFELAMQRLRKGADSGVKILRKVKAATGTM 741

Query: 154  MKFKFDGLSIDLLYASISRLVVREDLDISDM---SVLNDVDEPTVRSLNGCRVADQILKL 210
             + +  G+  DL Y     +  R  L++S +     L D+   ++  L   R    + + 
Sbjct: 742  WELEVRGVKFDLQYCPAGAVAERW-LEVSHLPRADPLFDLAYLSLVKLQPHRDQTYLQRT 800

Query: 211  VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LVSR 268
            + N   F    R +K WAK RG+YS+  G+LGG++  L+++R+ +L P    S+  ++  
Sbjct: 801  IQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTASVADILRT 860

Query: 269  FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVST 328
            FF  Y  + W   ++   I      F    PR NR  +   M I+T  YP MN +   S 
Sbjct: 861  FFNHYADFYWMEGMVYDMI------FHRKQPRYNRSPR-EGMVILTLHYPIMNVARTASI 913

Query: 329  STLRVMMDQFQYGNTICEEVELNKAQWSALF-------EPYL------FFESYRNYLQVD 375
            S++R ++D+    +T+  E  L   +W++L        +P L      F +SY +Y++++
Sbjct: 914  SSMRTIVDEMDRADTLISEGRL---RWTSLVGITPQAGQPTLSNSADEFLKSYNSYIKIN 970

Query: 376  I-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
            +       A    L+   GW+ESR   L   I R     LQ   +P  + 
Sbjct: 971  VQYWGLSLAKGSSLI---GWLESRCLFLLADIHR-KLPDLQTRIWPARFT 1016


>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
          Length = 1198

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 187/433 (43%), Gaps = 50/433 (11%)

Query: 97   GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE-------VTELQP-VLD 148
            GSY LGVH   +DID L VG   +S +  +      +LA+ ++       V +L+  V D
Sbjct: 616  GSYALGVHTCESDIDCLAVG--NISPQTFWLLARSRLLAQAKQQTGTGTTVVKLRRFVKD 673

Query: 149  AHVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQ 206
            A V +M+ +  G+ IDL Y    +LV R  E  +I   S L  +   ++ +L+  R    
Sbjct: 674  AAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPEIPVDSPLFALPASSLVTLSAYRDVLI 733

Query: 207  ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV---PS 263
            + +++P++  F    R LK +  RRG+     G+LGG +  LL+ RV    P++      
Sbjct: 734  LRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLPHSAGRSAP 793

Query: 264  MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSS 323
             LV  F R Y +W W    +      A +G   +     R  +   M +++ + P  N +
Sbjct: 794  HLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAY----KRVVQREPMAVLSISKPQKNIA 849

Query: 324  YNVSTSTLRVMMDQFQYGNTICEE--VELNKAQWSALFEPYLFFESYRNYLQVDIVAANA 381
             N S +++  +    Q  N   +     L+    + L     F + YR+++++++     
Sbjct: 850  SNASWNSVASLSHGLQTANATLQSGGTWLDVCGTNPLKS---FIDEYRSFVKIEVHYWGG 906

Query: 382  DDL--LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS--KPCA---HCAFFMG 434
            D +   A  GW+ES++  L + +   T  ++    +P   VD S   P     +  + +G
Sbjct: 907  DCMQGRALMGWLESKIVSLLVQLHM-TVPEVTARLWPQRLVDESVVDPNTRDPNSFYLLG 965

Query: 435  LQRKPGEVVQEGQQFDIRGSVEEFKLSI-------------NMYMFWKPGMEICVSHIRR 481
            L      +  +G +   R S  E + ++             N   +      I VSH +R
Sbjct: 966  LS-----LFSQGDEQTARRSSGELEAALLNALRTFEQNVRSNEKYYNAASTFISVSHAKR 1020

Query: 482  KQIPPYVFPEGYK 494
             Q+P  V  + +K
Sbjct: 1021 TQLPSSVLVDPFK 1033


>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
 gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
           ATCC 23134]
          Length = 982

 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 162/377 (42%), Gaps = 38/377 (10%)

Query: 35  NRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIF 94
           N+ L  ++ +    ++ +   KR+  L +++Q+  + + +   L+               
Sbjct: 582 NKSLIDWVNDQAPLQTTQTQLKRQAALAQVQQVCSEVLNQSVHLQ--------------- 626

Query: 95  TFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVM 154
            FGS  L +    +DID LC  P  ++ +  FF  L   L+++ +   L  V DA V  +
Sbjct: 627 VFGSELLKIAQAHSDIDVLCPLPPSLALDP-FFDQLQTALSQVAQGVHL--VTDARVTTL 683

Query: 155 KFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNV 214
           KF   G++ DLL        V   L           D  + +++ G     +IL L   V
Sbjct: 684 KFNLQGVNFDLLAVHHPSFPV--PLHQVKPEAFQQFDPLSWQNMVGYLEGQKILALGNKV 741

Query: 215 EH--FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC-QLYPNAVPSM--LVSRF 269
               F   +R ++ WA R+ +  NV GF G ++WA+L A  C        P++  L+  F
Sbjct: 742 GQTLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQNF 801

Query: 270 FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 329
           F +     W  P+ L      + G S +  RK+R      MP+++  YP  N++ N++ S
Sbjct: 802 FDLLAQHSWVIPIGL------QEGTSSYIVRKHR----DWMPVVSAFYPYKNTTRNLTQS 851

Query: 330 TLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKG 389
           T +V+  + Q    + +   +N   W   F      + Y   L +++ A+N  +L   +G
Sbjct: 852 TAKVIQGEIQKARLLLQNTSIN---WLTFFAATDVQKEYTQLLILELSASNEQNLELAQG 908

Query: 390 WVESRLRQLTLMIERDT 406
            +   L  + L +E+  
Sbjct: 909 KLLGSLLGVILALEQQV 925


>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
          Length = 1172

 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 15/275 (5%)

Query: 18  VTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTR 77
           ++ P S+A P  A++    +L+  L E  +  +KE+  KR  VL  +R +          
Sbjct: 606 ISIPSSLATP--ANLSDKHDLDLCLREHSMVPTKEDISKRTAVLDLLRNVIIHGSAARVD 663

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEM 137
             G+S+   + A  L+   GSY LGV  P +D+D L +GP      + FF I    L   
Sbjct: 664 ENGHSNNEPDIAMVLV-PVGSYGLGVWSPSSDVDCLSIGPI---SSKIFFAIAEQRLRRA 719

Query: 138 EE--VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLV---VREDLDISDMSVLNDVDE 192
            +  +  L+ V  A   +++ + +G+  DL Y   +R+V    R  L   D  +  D+  
Sbjct: 720 ADSGIRILRKVKAATGTMIELEVNGIKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSY 778

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             +  L   R  D I + +P++  F T  R +  WAK RGVY +  G+LGG++  ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838

Query: 253 VCQLYPNAV---PSMLVSRFFRVYTMWRWPNPVML 284
           V +L+   V    + ++ RFF+ Y  + W +  + 
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVF 873


>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
            JN3]
 gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
            JN3]
          Length = 1224

 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 188/439 (42%), Gaps = 68/439 (15%)

Query: 38   LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
            L+  L    +  ++++ E R+Q    ++ +    + +        D      +  +   G
Sbjct: 607  LQSMLYRQDMIPTEKQMEVRQQAFELLKNVVLGTIDK-------QDHASSGVSLNMVAVG 659

Query: 98   SYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE--VTELQPVLDAHVPVMK 155
            SY LGV    +D+D LCVG       + FF ++   LA      +  L+ V      +++
Sbjct: 660  SYALGVWTADSDLDCLCVGSV---SSKTFFKLVRQRLARARNRGIKILRKVEAKTGTMLE 716

Query: 156  FKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPN 213
               DG+S DL Y   +R+  R  E   +S    + ++   ++R L   R    I + +P+
Sbjct: 717  LSVDGISADLHYCPAARIAERWSEFHGLSASDPIFNLPALSLRKLKSYRDFLYIQRTLPS 776

Query: 214  VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC-----QLYPNAVPSMLVSR 268
            +  F T  RC+K WA +RG+YS+  G+L G +  L++  +C     Q      P M+VS 
Sbjct: 777  LSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITLMLTWICKKLRYQSGSVGPPDMVVS- 835

Query: 269  FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNSSYNV 326
            FF  Y  + W N ++  A       F    PR +R  +    P++   Y  P  N ++  
Sbjct: 836  FFSYYANFDWTNELLFDAF------FHESRPRYHRSARE---PMVILGYHAPHSNIAHTS 886

Query: 327  STSTLRVMMDQFQ----------------YGN--TICEEVELNKAQWSALFEPYLFFESY 368
            +T  L+++M++F+                +G+  ++ + V+L+ +Q +       F  + 
Sbjct: 887  TTPGLQILMNEFRAAADVLSSPGITWAKFFGDPSSLKDSVQLHLSQMTE-----HFLATQ 941

Query: 369  RNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS 423
             +++ V++       A    L+   GW+ESR   L + I +    +L+   +P  + +  
Sbjct: 942  HSFVTVEMQYWGRTLAKGKGLV---GWIESRCLSLVVDIHK-MLPELEVRIWPTRFTNDK 997

Query: 424  KPCA-----HCAFFMGLQR 437
                     H  + +GL R
Sbjct: 998  ADLKELKEYHGCYLIGLTR 1016


>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
          Length = 304

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 125/266 (46%), Gaps = 27/266 (10%)

Query: 16  YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLG-RIRQIAKDWVKE 74
           YG TKP+ +      D               L ESK   E    V+  R+R+ A D + E
Sbjct: 5   YGPTKPLEVPPAQPRD---------------LAESKRLCETMATVVADRVRE-AIDLI-E 47

Query: 75  LTRLRGYSDQMV---EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILH 131
           LT  R   DQ+    E+     + FGS  LG     +D+D +    S+    E FF    
Sbjct: 48  LTAHR-LVDQITAEPEERWVRAYPFGSCGLGASVADSDLDIVLFC-SFKVTAEVFFREFP 105

Query: 132 NILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVD 191
            +L  +     L P   A VPV+KF + G S+D+++ S +         + D S L  V 
Sbjct: 106 PLLQPVVGNVVLVP---ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVA 162

Query: 192 EPTVRSLNGCRVADQILKLVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
             T  S+NG R   ++ + +P   + F T L+ +K WA RR VY N+  +  GV  A++V
Sbjct: 163 RDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMV 222

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMW 276
           AR+CQ+ P + P++L+  FF  YT W
Sbjct: 223 ARICQVMPASHPNVLLRFFFLFYTQW 248


>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 1201

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 180/411 (43%), Gaps = 64/411 (15%)

Query: 52  EEDEK-REQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADI 110
           E+DE+ R+Q LG +R I   W  E T +    +Q       ++   GSY LGV    +DI
Sbjct: 598 EKDERTRKQALGLLRMIL--WENEQTNV----EQSRGQPALVLVPVGSYGLGVWSKSSDI 651

Query: 111 DALCVGPSYVSREEDFFFILHNILAEMEE-VTELQPVLDAHVPVMKFKFDGLSIDLLY-- 167
           D LC+G   +S    F    H +   + E V  L+ V      +++ +  GL  DL Y  
Sbjct: 652 DCLCIGS--ISPRVFFTLARHRLRKSVGEGVRILRQVKAKTGTMLEIEVLGLRCDLQYCQ 709

Query: 168 -ASISR----LVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLR 222
            AS++     L+ R   D +       +   T+  L   R    I + VP++  F    +
Sbjct: 710 AASVANQWPNLLKRPPSDAA-----FSLPTQTLLKLKPARDMYYIARSVPDLAQFRVCYQ 764

Query: 223 CLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM----LVSRFFRVYTMWRW 278
            +K WAK  G+Y+   G+LGGV+ ++++ RVC++  + + ++    +++ FF  Y  + W
Sbjct: 765 VIKTWAKANGIYAAKFGYLGGVHLSVMLVRVCKMLLHGMGTVSTADVIATFFDHYAHFDW 824

Query: 279 PNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP-----IITPAYPCMNSSYNVSTSTLRV 333
            N +             V+DP  +++ + H  P     ++    P +N++   S  T+++
Sbjct: 825 KNDI-------------VFDPFFHKQLRYHRTPREAMCLLGWHSPTLNTALIASVPTVKI 871

Query: 334 MMDQFQYGNTICEEVELNKAQW-SALFEPYL------------FFESYRNY--LQVDIVA 378
           +  + +  N    E     A W S L  P +            F  S++ +  L++    
Sbjct: 872 ISTELRQANAKFTE----GATWQSILSAPGMIAEKDLSQGAASFLSSFKTFVNLRIHYWG 927

Query: 379 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC 429
            + +      GW+ESR   L + I R    +L    +P  +VD + P + C
Sbjct: 928 GSLERGSRLVGWLESRCASLLVDINRKV-PELAPRIWPARFVDAATPNSQC 977


>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
          Length = 183

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/82 (59%), Positives = 61/82 (74%), Gaps = 7/82 (8%)

Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           +RSLNGCRV D+IL LVPN  +F +TLR +K WAKRRG+YS     LGG +WA+LVAR C
Sbjct: 5   IRSLNGCRVTDEILHLVPN--NFRSTLRAIKLWAKRRGIYSTFR-ILGG-SWAMLVARTC 60

Query: 255 QLYPNAVPSMLVSRFFRVYTMW 276
           QLY NA+ S LV +F+   +MW
Sbjct: 61  QLY-NAIASTLVHKFY--VSMW 79


>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
          Length = 1212

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 36/354 (10%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAH 150
           ++   GSY LG  GP +D+D LC+G   +S    F   +  +  A    +  ++ V  A 
Sbjct: 645 VLIPVGSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRKASALGIRIVRKVKAAT 702

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
             +++ +   + +DL Y   +++  R  E   I     + D+   ++  L   R  + + 
Sbjct: 703 GVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIPSHDPIFDLSLHSLSKLQPYRDQEYVK 762

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL----YPNAVPSM 264
           ++VP++  F    RC+  WAK  GVYS+  G LGG++  ++++R+ QL    +       
Sbjct: 763 RMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHERFGRVTVPE 822

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
           LV+ FF  Y  + W N +++        G       + RR     M I+T   P +N + 
Sbjct: 823 LVAMFFHHYAHFDWKNNMVVSP------GVHT----RYRRSLREPMVILTAHVPTVNVAR 872

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-----------LFFESYRNYLQ 373
            V+  +LR ++  F+    +  E   + A+WS +                F  +Y +Y++
Sbjct: 873 AVTAPSLRTIVSAFKRAEELIGE---DGAKWSNILNDISISQNNQTGAEKFLAAYNSYIK 929

Query: 374 VDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           V++     +     +  GW+ESR  +L   + R   G +    +P  +     P
Sbjct: 930 VNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGRIWPARFTSIDAP 982


>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
          Length = 1212

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 36/354 (10%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAH 150
           ++   GSY LG  GP +D+D LC+G   +S    F   +  +  A    +  ++ V  A 
Sbjct: 645 VLIPVGSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRKASALGIRIVRKVKAAT 702

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
             +++ +   + +DL Y   +++  R  E   I     + D+   ++  L   R  + + 
Sbjct: 703 GVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIPSHDPIFDLSLHSLSKLQPYRDQEYVK 762

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL----YPNAVPSM 264
           ++VP++  F    RC+  WAK  GVYS+  G LGG++  ++++R+ QL    +       
Sbjct: 763 RMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHERFGRVTVPE 822

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
           LV+ FF  Y  + W N +++        G       + RR     M I+T   P +N + 
Sbjct: 823 LVAMFFHHYAHFDWKNNMVVSP------GVHT----RYRRSLREPMVILTAHVPTVNVAR 872

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-----------LFFESYRNYLQ 373
            V+  +LR ++  F+    +  E   + A+WS +                F  +Y +Y++
Sbjct: 873 AVTAPSLRTIVSAFKRAEELIGE---DGAKWSNILNDISISQNNQTGAEKFLAAYNSYIK 929

Query: 374 VDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKP 425
           V++     +     +  GW+ESR  +L   + R   G +    +P  +     P
Sbjct: 930 VNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGRIWPARFTSIDAP 982


>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus heterostrophus
            C5]
          Length = 1226

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 182/427 (42%), Gaps = 67/427 (15%)

Query: 30   ADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDA 89
            A +  + ++   L   G+  + E+  +R++    +++I  D                EDA
Sbjct: 607  ATLTDSSDMSSALEVHGMIPNDEQTTQRQEAFALLQRIVSD--------------TSEDA 652

Query: 90   NA-------LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN---ILAEMEE 139
                     +I   GSY LGV    +DID LC+G    S     FF L     + A   +
Sbjct: 653  ETGQSGIPLVIVPVGSYALGVWTSSSDIDCLCIG----SISSKTFFKLARQRLVKAGNPQ 708

Query: 140  VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRS 197
            V  L+ V  A   +++   +G+ +DL Y   +++V R  E  +I     + ++   ++R 
Sbjct: 709  VRILRKVEAATGTMLELSINGILMDLQYCPAAQVVERWSELAEIPASDPIFNLSMLSLRK 768

Query: 198  LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 257
            L   R    + + +P+   F    R +K WA +RG+Y+   G+LGG++  L+++ VC+  
Sbjct: 769  LKPYRDLLYLQRTIPSRSIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITLMLSWVCKSL 828

Query: 258  PNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
             + V S+    +V  FF+ Y  + W N ++  A       F    PR NR  +   M I+
Sbjct: 829  AHNVGSVSIADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYNRSAR-EPMVIL 881

Query: 314  TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF--------EPYL-- 363
            +   P  N +   +   L+ ++ + +  +    E  +    W   F        EP L  
Sbjct: 882  SFHAPNSNFAQKSTVPGLQTLIKELKAADMKLSEPGMT---WQKFFSTSSDLASEPRLPY 938

Query: 364  ----FFESYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
                F  +Y +++++DI     + A    L+   GWVESR   + + I +   G  +   
Sbjct: 939  GAVEFLNTYNDFVKIDIQFWGRMLAKGKSLV---GWVESRCISIVVDIHKALPGS-EVRV 994

Query: 415  YPHEYVD 421
            +P  + D
Sbjct: 995  WPALFTD 1001


>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
          Length = 1226

 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 184/420 (43%), Gaps = 53/420 (12%)

Query: 30   ADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDA 89
            A +  + ++   L   G+  + E+  +R++    +++I  D  ++       +D +    
Sbjct: 607  ATLMDSSDMSSALEVHGMIPNDEQTTQRQEAFELLQRIVSDTSED-------ADTVQPGI 659

Query: 90   NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN---ILAEMEEVTELQPV 146
              +I   GSY LGV    +DID LC+G    S     FF L     + A   +V  L+ V
Sbjct: 660  PLVIVPVGSYALGVWTSSSDIDCLCIG----SISSKTFFKLARQRLVKAGNPQVRILRKV 715

Query: 147  LDAHVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVA 204
                  +++   +G+ +D+ Y   +++V R  E  DI     + ++   ++R L   R  
Sbjct: 716  EATTGTMLELSVNGILMDMQYCPAAQVVERWSEFADIPASDPIFNLSMLSLRKLKPYRDL 775

Query: 205  DQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM 264
              + + +P+   F    R +K W  +RG+Y+   G+LGG++  L+++ VC+   + V S+
Sbjct: 776  LYLQRTIPSRSLFRQAYRLIKLWGVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHDVGSV 835

Query: 265  ----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCM 320
                +V  FF+ Y  + W N ++  A       F    PR NR  +   M I++   P  
Sbjct: 836  NVADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYNRSTR-EPMVILSFHAPNS 888

Query: 321  NSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF--------EPYL------FFE 366
            N +   +   L++++ +F+  +    E  +    W   F        +P L      F  
Sbjct: 889  NFAQKSTVPGLQMLIKEFKAADMKLSEPGMT---WQKFFSTSSDLALKPCLPSGVVEFLN 945

Query: 367  SYRNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
            +Y +++++DI     + A    L+   GWVESR   + + I +   G  +   +P  + D
Sbjct: 946  AYSDFVKIDIQFWGRMLAKGKGLV---GWVESRCISIVVDIHKALPGS-EVRVWPALFTD 1001


>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
          Length = 1200

 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 100/464 (21%), Positives = 188/464 (40%), Gaps = 59/464 (12%)

Query: 2   SSSERMSSPPPPK-QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
           SS+  MS    P+ +  +  P+   G  E        LE FL   G   +++E E R Q 
Sbjct: 562 SSAREMSKAAVPEMKIKLQHPVPSLGEGEG-------LENFLENYGCLPTEQERENRAQA 614

Query: 61  LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV 120
           +  +    KD       L    D        ++   GSY LGV    +DID LC+GP   
Sbjct: 615 VRALEVALKD-----VDLPASEDDTRSGPPFVVVPVGSYGLGVWTSSSDIDCLCIGPF-- 667

Query: 121 SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR--ED 178
              + FF +    L    ++  ++ V      +++ +  G+ +DL Y + + +  R  E 
Sbjct: 668 -SSKTFFALAVQRLKRAADIRIIRRVKANSGYMLELEVHGIKVDLQYCAAASIAERWPEV 726

Query: 179 LDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVT 238
           +          +   T+  L   R    + + +P++  +      +K WA+ RG+YS   
Sbjct: 727 MKRPANDSAFALPFQTLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKF 786

Query: 239 GFLGGVNWALLVARVCQLYPNA----VPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGF 294
           GFLGG++ ++L+  +C+   +      P+ +V  FFR Y+ + W   ++       +L  
Sbjct: 787 GFLGGIHISVLLVPICKALASGSETVSPTDIVVTFFRHYSNFDWKTSMVFDPFFHKDL-- 844

Query: 295 SVWDPRKNRRDKTHHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNK 352
                   R ++T   P+    +  P +N++   S  T+  +  + +  N +  E   N 
Sbjct: 845 --------RYNRTFREPLCLIGWHAPALNTAPIASNPTVMTIAAEIERANRLLSE---NG 893

Query: 353 AQWSALF------------EPYLFFESYRNYLQVD--IVAANADDLLAWKGWVESRLRQL 398
             W+++                 F + ++ Y+++D      + +    + GW+ESR   L
Sbjct: 894 CTWNSVLGLQSAQEAGKSRGATEFLKEFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVML 953

Query: 399 TLMIERDTYGKLQCHPYPHEYVDTSKPCA-------HCAFFMGL 435
            + + R     L    +P  ++DTS   A       H  + +GL
Sbjct: 954 LVDVNRK-LQHLVARIWPSRFLDTSSGGAGGPGEEYHGCYLIGL 996


>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 1266

 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 189/444 (42%), Gaps = 68/444 (15%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAH 150
            ++ T GSY LGV    +D+D LCVG   +S +  F   L  +    E +V  L+ V  A 
Sbjct: 680  VVTTVGSYGLGVWTDSSDVDCLCVGS--ISSKVFFELTLQRLKKGAEWDVKILRKVKAAT 737

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ + + +  DL Y   + +  R  E   +   S L D+    +  L   R    + 
Sbjct: 738  GTMLELEINSVKFDLQYCPAAAVAERWLEVPHLPRSSPLFDLALLPLMKLQPYRDQAYLQ 797

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM---- 264
            + VPN   F    R +K WAK RG+YS+  G+LGG++  +++++V +L P+  P+     
Sbjct: 798  RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAAD 857

Query: 265  LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH------MPIITPAYP 318
            ++  FF  Y  + W   VM             +DP  +++   +H      M I+T   P
Sbjct: 858  ILCTFFNYYGNFNWKEGVM-------------YDPSFHKKPPLYHRTPQEGMVILTLHAP 904

Query: 319  CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY----------LFFESY 368
             MN + + S  + R ++D+ +  + +  E   N A+   +               F  SY
Sbjct: 905  VMNVARSASIPSTRTIVDEMKRADNLISEGNTNWAELVGIVANTGKSSLSVSGDEFLRSY 964

Query: 369  RNYLQVDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV--- 420
             +Y+++++       A    L+   GW+ESR   L   + R  +  +Q   +P  +    
Sbjct: 965  NSYIKINVQYWGLSLAKGSSLV---GWLESRCLVLLADLHR-KFPDIQTRIWPARFTQIE 1020

Query: 421  --DTSKPCA-----HCAFFMGLQRK-----PGEVVQEGQQF----DIRGSVEEFKLSINM 464
              D S P          + + L +      P   + +  +      ++ S+++F  +I+ 
Sbjct: 1021 DHDDSTPAQEEREYQGCYLISLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHN 1080

Query: 465  Y--MFWKPGMEICVSHIRRKQIPP 486
            Y   F      + VSH+++  + P
Sbjct: 1081 YKKYFDSASAWVDVSHVKQGNLGP 1104


>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
 gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
          Length = 1206

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/394 (21%), Positives = 174/394 (44%), Gaps = 25/394 (6%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           + +  L    +  S+EE   R Q+   I       V + T       +   + + ++   
Sbjct: 594 QFKTLLYGLNMIPSEEEFAHRHQMFKLIESAVHQRVFDATV------ETRLNISFVVVPV 647

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMK 155
           GSY LGV    +DID L +G   +S       ++  +   E +E+  L+ +  A   +++
Sbjct: 648 GSYGLGVWDTSSDIDCLVIGT--ISPRTFMALMVQKLRRPEWQEIHILRKIKAASGTMLE 705

Query: 156 FKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPN 213
            +  G+  DL Y + + +     + L++       D+   ++  LN  R  + + + +P+
Sbjct: 706 LQAGGVGFDLQYCAATSVAESWPKALELPSSDSTFDLPMQSLLKLNAVRDLEYLQRTIPD 765

Query: 214 VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL----YPNAVPSMLVSRF 269
           +  F    R +K WAK RG+YS+  G+LGG++  LL+A VC+L          S ++  F
Sbjct: 766 LATFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITLLLALVCKLSFRESGATHESDILCTF 825

Query: 270 FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTS 329
           F  Y  + W N ++       +  +   +P+ +R  +   + I++   P +N ++  +  
Sbjct: 826 FSYYAHFDWKNDLVY------DTTYYTVEPKYHRSSR-EPLVILSIHPPKVNVAHASTVP 878

Query: 330 TLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDI--VAANADDLLAW 387
           +++ + ++F   N +  +  ++    +     Y F  +Y +Y++VD+   A       A 
Sbjct: 879 SVKTLEEEFDRANRLISKAGVSWEDIAGQTGIYQFLNAYPSYIKVDVQYWAKAVAKGRAL 938

Query: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
            GW+E R   L + I R  +  +    +P  + +
Sbjct: 939 FGWLEFRCVSLLVDINR-RFANVHARIWPARFTN 971


>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
 gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
          Length = 1216

 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 41/340 (12%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAH 150
           ++   GSY LG  GP +D+D LC+G   +S    F   +  +  A    +  ++ V  A 
Sbjct: 648 VLIPVGSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRKASALGIRIVRKVKAAT 705

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
             +++ +   + +DL Y   + +  R  E   I     + D+   ++  L   R  + I 
Sbjct: 706 GIMLELQSGHIKLDLQYCPAANVAERWQEISRIPFNDPIFDLPPHSLSELQPYRDQEYIK 765

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM---- 264
           ++VP++  F    RC+  WAK  GVYS+  G LGG++  ++++R+ QL       +    
Sbjct: 766 RMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHEKCGRVTAPE 825

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
           LV+ FF  Y  + W N +++    +           + RR     M I+T   P +N + 
Sbjct: 826 LVAMFFHHYAHFDWKNNMVVSPGVQT----------RYRRSLREPMVILTVHVPTINVAR 875

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-----------LFFESYRNYLQ 373
            V+  +LR ++  F+    +  E   + A+WS +                F  +Y +Y++
Sbjct: 876 AVTAPSLRTIVSAFKRAEELMGE---DGARWSNILNDISISHNNQTGAEKFLAAYNSYIK 932

Query: 374 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYG 408
           V++         A  L+   GW+ESR  +L   ++R   G
Sbjct: 933 VNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQVLG 969


>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
 gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
 gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
 gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
          Length = 1238

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 183/436 (41%), Gaps = 59/436 (13%)

Query: 21   PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRG 80
            P+ +A   E+ M+  + L+  L   G   + EE+ +R+     +R +    + E     G
Sbjct: 595  PVDLARAPES-MRDPQVLKGMLESMGAIPAAEENPRRQAAFDALRHVVTGNLVE-----G 648

Query: 81   YSDQMVED---ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AE 136
             SD    D   ++ ++   GS+ LGV    +DID LC+GP  +S    F      I  A 
Sbjct: 649  VSDASEYDRLRSSIIMVPVGSWGLGVSTLSSDIDCLCIGP--LSSSTFFALTTQRIKKAS 706

Query: 137  ME---EVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVD 191
            +E   E+  L+ V      +++ +   + +DL Y + + +  +    L +     +  + 
Sbjct: 707  VESGLEIKLLRRVRANSGVMLELEVMSVRVDLQYCAATAVAEQWPAVLKLPPNDPIFALP 766

Query: 192  EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
              T+  L   R  D + + +P++  F    R +K WA+ RG+YS   G+LGG+  ++L+A
Sbjct: 767  AQTLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLA 826

Query: 252  RVCQLYPN------AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
            RVC+L         +VP +L S FF  Y  + W N +        +L +         R 
Sbjct: 827  RVCKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNY--------LRS 877

Query: 306  KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-- 363
                + I+    P +N++   +  +++ +  +    N +  E   +   W   F      
Sbjct: 878  AREPLAILGFFPPALNTTLAATVPSMKAIARELSQANELLNE---DGMTWDTFFGASSAG 934

Query: 364  -------------FFESYRNYLQVD-----IVAANADDLLAWKGWVESRLRQLTLMIERD 405
                         F  SY+++++++     I  +     +   GW+ESR   L + + R 
Sbjct: 935  GDKTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFI---GWLESRCPLLLVDMSR- 990

Query: 406  TYGKLQCHPYPHEYVD 421
               +L    +P  +V+
Sbjct: 991  RLPQLNFRIWPQRFVE 1006


>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
          Length = 771

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 147/351 (41%), Gaps = 75/351 (21%)

Query: 78  LRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGP----------SYVSREEDFF 127
           LR    Q++ + + LI  +GS  L      +D D + V            S + R++  F
Sbjct: 337 LRECIIQILNECDYLILQYGSSFLMAETQESDYDLILVNKLNDLQQTCENSDLIRQQFLF 396

Query: 128 FILHNILAEMEEVTELQ--PVLDAHVPVMKFKF-DGLSIDLLYASISRLVVREDLDISDM 184
             L   L     +  L+   +  A VP++K K+   ++IDL  A    +V   +  +S +
Sbjct: 397 EKLAEQLNMNFTIKNLEIFKIKHAKVPILKMKYKQQINIDLSLA----IVCNTEEKLSQI 452

Query: 185 SVLNDV--DEPTVRSLNGCRVADQILKLVP----NVEHFCTTLRCLKFWAKRRGVYSNVT 238
           S+ N +  D  +  S+N    + +I  LV     N E F   L+ +K WA+RR VY    
Sbjct: 453 SIQNYLLFDNQSEVSINAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQY 512

Query: 239 GFLGGVNWALLVARVCQLYPNAVPSM----------------LVSRFFRVYTMWRWPNPV 282
           G+LGG+ +A+L A + Q Y N    M                 + +FF+ Y+ W WPNP+
Sbjct: 513 GYLGGIAFAILCANIVQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPI 572

Query: 283 MLCAIDEAELGF-------------------SVWDPRKNRRDKTHHMPIITP-------- 315
           +L      + GF                    +W+P     D  H MPII+P        
Sbjct: 573 IL------DQGFYDQENLLNPNGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQK 626

Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSAL---FEPYL 363
                N++  V  S L++ + +F+    I +++   K +   L   FE ++
Sbjct: 627 TITSTNTADQVLNSNLQIYLYEFKRAYKIMKKIYKGKIKLKELGSAFESFI 677


>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1178

 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 39/352 (11%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAH 150
           ++ T GS  LGV    +DID LCVG   +S    F  I+  +   ++  V  ++ V  A 
Sbjct: 641 VVTTVGSSGLGVWTESSDIDCLCVGS--ISANVFFELIIQRLRNRIDLGVKIIRRVKPAF 698

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
             +++ + +G+  DL Y   + +  R  E  ++   S L ++       L   R    + 
Sbjct: 699 GTMLELEINGIKFDLQYCPAAAVAKRWLEVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 758

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 266
           + + N   F    R +K WAK RG+YS+  G+LGG++  L+++R+ +L P    S   ++
Sbjct: 759 RTIRNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 818

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
             FF  Y  + W    +   I   +       P +N R     M I T   P +N + + 
Sbjct: 819 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 871

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-------------LFFESYRNYLQ 373
           S  ++R ++D+ +    +  E     A W+ L   Y              F +SY +Y++
Sbjct: 872 SIPSMRKIVDEMKRAENLISE---GNANWAELLGVYPKPGKSALSSSADEFLKSYNSYIK 928

Query: 374 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           +++       A    L+   GWVESR   L   + R+ +  +Q   +P  + 
Sbjct: 929 INVQYWSLSLAKGSSLV---GWVESRCLDLLNDLYRE-FPDIQARIWPARFT 976


>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 1256

 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 187/439 (42%), Gaps = 60/439 (13%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAH 150
            ++ T GS  LGV    +DID LCV  S +S    F  I+  +   ++  V  ++ V  A 
Sbjct: 682  VVTTVGSSGLGVWTESSDIDCLCV--SSISANVFFELIIQRLRNRIDLGVKIIRRVKPAF 739

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ + +G+  DL Y   + +  R  E  ++   S L ++       L   R    + 
Sbjct: 740  GTMLELEINGIKFDLQYCPAAAVAERWLEVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 799

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 266
            + + N   F    R +K WAK RG+YS+  G+LGG++  L+++R+ +L P    S   ++
Sbjct: 800  RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 859

Query: 267  SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
              FF  Y  + W    +   I   +       P +N R     M I T   P +N + + 
Sbjct: 860  CTFFNHYGNFNWGKDAVYDPIFHGK-------PPRNYRPPREGMIIFTLHTPIINVARST 912

Query: 327  STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-------------FFESYRNYLQ 373
            S  ++R ++D+ +    +  E     A W+ L   Y              F +SY +Y++
Sbjct: 913  SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969

Query: 374  VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTS 423
            +++       A    L+   GWVESR   L   + R+ +  +Q   +P  +      + S
Sbjct: 970  INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYRE-FPDIQARIWPARFTQNEDHENS 1025

Query: 424  KPCA-----HCAFFMGLQ---------RKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMF 467
             P          + +GL+         R   ++ ++  Q  ++ S+++F  S+  N   F
Sbjct: 1026 TPAQEEHEYQGCYLIGLRKADHATDPTRTFSKLDRKLAQDTLQASMDQFASSVQSNKKYF 1085

Query: 468  WKPGMEICVSHIRRKQIPP 486
                  + V+H+++  + P
Sbjct: 1086 NLASAWVDVTHVKQDSLGP 1104


>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
 gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 973

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 137/354 (38%), Gaps = 35/354 (9%)

Query: 90  NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
           + ++   GS R+G    GAD+D +   P  V    D   +   + A + + T ++ V  A
Sbjct: 617 DGVVHVVGSRRMGCALAGADLDLVAALPGGV----DLADVRARVTAALPDGTRVRQVTGA 672

Query: 150 HVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILK 209
            VP ++ +   L +DL+  +   L   E      ++   ++D+    +L+    AD +  
Sbjct: 673 RVPGLRLRTGDLDVDLVVVATGTLDPGEA-----VARRAELDQAAAIALSAVSDADAVRA 727

Query: 210 LVPNVEHFCTTL-RCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 268
            V +     T L R +K WA  RG+ S   G L G+ W++L AR  +   ++    L+  
Sbjct: 728 AVGDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLLRH 787

Query: 269 FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII--TPAYPCMNSSYNV 326
           FF  +  W W +PV L                        H P++  TP  P  N +  V
Sbjct: 788 FFGTWAAWDWRDPVGLAPTGTGP-----------------HTPVVLMTPTDPVRNCTGQV 830

Query: 327 STSTLRVMMDQFQYGNTICE-EVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLL 385
                 ++ D+     TI E   + +   W  L  P      +  +  + +    A++  
Sbjct: 831 GAGFRDLLTDELYRAWTILETAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPAEEFE 890

Query: 386 AWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 439
              G V  RLR L   +E          P P E    + P     + +GL R P
Sbjct: 891 ETSGRVRGRLRALLTALEDAGAADAYAWPRPFE----TGP-GFVRYAIGLGRTP 939


>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
 gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
          Length = 1209

 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 41/340 (12%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAH 150
           ++   GSY LG  GP +D+D LC+G   +S    F   +  +  A    +  ++ V  A 
Sbjct: 648 VLIPVGSYGLGTWGPRSDVDCLCIGA--ISSTTFFALAIQRLRKASALGIRIVRKVKAAT 705

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
             +++ +   + +DL Y   + +  R  E   I     + D+   ++  L   R  + I 
Sbjct: 706 GVMLELQSGHIKLDLQYCPAANVAERWQEISRIPSHDPIFDLSLHSLSKLQPYRDQEYIK 765

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL----YPNAVPSM 264
           ++VP++  F    RC+   AK  GVYS+  G LGG++  ++++++ QL    +       
Sbjct: 766 RMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQLHQLVHEKFGRVTVPE 825

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSY 324
           LVS FF  Y  + W N +++    +           + RR     M I+T   P +N + 
Sbjct: 826 LVSMFFHYYAHFDWKNNMVVSPGVQT----------RYRRSLREPMVILTVHVPTINVAR 875

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPY-----------LFFESYRNYLQ 373
            V+  +LR ++  F     +  E   + A+WS +                F  +Y +Y++
Sbjct: 876 AVTAPSLRTIVSAFNRAEELMGE---DGARWSNILNDISISHNNQTGAEKFLTAYNSYIK 932

Query: 374 VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYG 408
           V++         A  L+   GW+ESR  +L   ++R   G
Sbjct: 933 VNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQALG 969


>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
 gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1302

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 177/435 (40%), Gaps = 41/435 (9%)

Query: 22   ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD------WVKEL 75
            I +  P    +     L + + E  ++ S EE  KR+     ++ I  D      + + +
Sbjct: 638  IKLITPPAGPLSEPGSLTEAMAELNIFPSHEEISKRKAAFHALKIILLDNPPPNQYPQAV 697

Query: 76   TRLRGYSD-QMVEDANALIFT-FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
            T     S+ Q   +   LI T  GS+ LGVH   +DID L +GP   +    FF +    
Sbjct: 698  TDTTTASETQARSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTN---TFFSLAIQR 754

Query: 134  LAEMEE---VTELQP-----VLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
            L         +  QP     +  +   +++   + +  DL Y   + +       +S   
Sbjct: 755  LRRASSSPLFSSYQPKILRRIYSSTGTMLELSVNQIKFDLQYCPAAHIASNWPRILSTAP 814

Query: 186  VLNDV---DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
              N V      T+  L   R  D + + VP++  F T  R ++ WAK RGVY+   G+LG
Sbjct: 815  PGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLG 874

Query: 243  GVNWALLVARV------CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAE 291
            G+  ++++ARV       Q         LV+ FF  Y  + W   ++   +      + E
Sbjct: 875  GIQISVMLARVYKALALTQGVTRVGVEELVASFFEEYARFHWGRDMVYDEVCPWFRQKRE 934

Query: 292  LGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYG--NTICEEVE 349
             G    +    RR     M ++    P +N+S   S  ++R + ++F+      + EEV 
Sbjct: 935  KGG---EKEVYRRTSREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFERARDQLVKEEVR 991

Query: 350  LNKAQWSALFEPYLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTY 407
              K           F   Y++Y++VD+     +      + GW+ESRL  L + + R   
Sbjct: 992  SWKEFLEGSSAAEEFLTGYKSYVKVDVQYWGLSPSRGAQFVGWLESRLVMLLVDLHRRAP 1051

Query: 408  GKLQCHPYPHEYVDT 422
            G +    +P  +V+ 
Sbjct: 1052 G-VYVRMWPARFVEA 1065


>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
 gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
          Length = 1221

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 62/424 (14%)

Query: 32  MQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANA 91
           + R   +++ LVE G   S EE  +RE  L  ++ +  D      +  G    +   +  
Sbjct: 592 LARPGSVKEALVELGAIPSAEETAQREAALDLLKSVLLD--TPAAKSAGTKSSL---SPV 646

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL--AEMEEVTELQPVLDA 149
           ++   GSY L V    +DID LC+GP       +FF +    L  A  + +  L+ V   
Sbjct: 647 VVVPVGSYALDVWTSSSDIDVLCIGPFST---HNFFALASQRLRKAAGQGIRILRRVRAN 703

Query: 150 HVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQI 207
              +++ + DG+ +DL Y   + +  R    L       +  +   T+  L   R  D I
Sbjct: 704 TGTMLEIEVDGIKMDLQYCPATSVAERWPHVLQTPASDPVWSLSAQTLSKLKAVRDVDYI 763

Query: 208 LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY-----PNAVP 262
            + VP++  F    R +K WAK RG+YS   GFL G+  ++L+ARV +L      P +V 
Sbjct: 764 RRSVPDLAAFRLAHRFIKTWAKSRGIYSARFGFLSGIQISILLARVQKLLARESGPCSVE 823

Query: 263 SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR----DKTHHMPIITPAY- 317
            +L + FF  Y  + W           A   F   DP  +R      +T   P+    Y 
Sbjct: 824 DLLAT-FFTHYAAFDW----------SARPAF---DPLFHRHRLPYTRTPREPLAVLGYF 869

Query: 318 -PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL------------- 363
            P +N++   S  +++ +  +F+           + +  S+  +P+              
Sbjct: 870 PPSLNTAAAASVPSVKTLAAEFRRAGAAFLSSSSSSSS-SSSSDPHPARSWSSLAAPSAA 928

Query: 364 --FFESYRNYLQVDIV-----AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 416
             F  ++R+Y+++D+       A    LL   GW+ESR   L + + R   G L    +P
Sbjct: 929 SDFLAAHRSYVRLDVQYWGLPRARGAQLL---GWLESRCAALLVDLHRRAPG-LHARMWP 984

Query: 417 HEYV 420
             +V
Sbjct: 985 GRFV 988


>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
           25435]
          Length = 930

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 147/360 (40%), Gaps = 48/360 (13%)

Query: 84  QMVEDA--NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVT 141
           ++V DA    ++   GS R+G   PGAD+D +   P            L ++  E+ E  
Sbjct: 581 RLVADAFPGGVVHVVGSRRMGCALPGADLDLVAALPGTAE--------LTSVQRELREAV 632

Query: 142 ELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD-ISDMSVLNDVDEPTVRSLNG 200
           +++ V+ A VP ++ + DG+++DL       +V    LD +  ++   ++ E    +L+ 
Sbjct: 633 DVREVVGARVPGLRLRLDGVNVDLA------VVATGSLDPVEAVARRTELGEAAAVALSA 686

Query: 201 CRVADQILKLVPNVE-HFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 259
              A+ +L  V   E  F    R +K WA+ RG+ S   G L G+ W++L AR      +
Sbjct: 687 VSDAEAVLASVGGHEPAFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGD 746

Query: 260 AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPC 319
             P  L+  FF  +  W W  PV         L  +                I+TP+ P 
Sbjct: 747 LPPDGLLRHFFATWAAWDWREPVGGPGGTSGRLPLT----------------IVTPSAPV 790

Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
              +  V+T    ++  +      + EE     + W+ L  P      +  +  V +   
Sbjct: 791 RPCTDQVTTGMRDLITQELFRAWELLEE----GSSWADLLTPPPLHRRHAAWAIVTVGGG 846

Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 439
            A   +A +G V  R+R L   +     G   CH +P  +  T+ P  +    +GL   P
Sbjct: 847 PAG--VADEGRVRGRMRALVTDLAEVAPG---CHAWPRPF--TTAPARYA---IGLGPTP 896


>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001]
          Length = 1198

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 104/465 (22%), Positives = 200/465 (43%), Gaps = 67/465 (14%)

Query: 47   LYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGP 106
            ++ +++++  R++ L  +RQI  D        +  +DQ       ++   GSY LG    
Sbjct: 596  VFPTEQDETTRKEALQLLRQILLD------SDQANADQTRGRPTVMLVPVGSYGLGTWSR 649

Query: 107  GADIDALCVGPSYVSREEDFFFILHNILAEMEE--VTELQPVLDAHVPVMKFKFDGLSID 164
             +DID LC+G S   R   FF +    L +  E  V  L+ V      +++ +  G+  D
Sbjct: 650  TSDIDCLCIG-SISPRI--FFTLARQRLRKSGESGVRLLRKVKAKTGTMLEVEVMGIKCD 706

Query: 165  LLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLR 222
            L Y     +V +  + L          +   T+  L   R    + + +P++  F  + +
Sbjct: 707  LQYCQAPSVVDQWPDMLKRPPSDPAFSLPMQTLLKLKPARDLFYLQRSIPDLAQFRVSFQ 766

Query: 223  CLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ--LYPNAVPSM--LVSRFFRVYTMWRW 278
             +K WAK RG+Y+   G+LGG++ ++++ +VC+  L    V S   +++ FF  Y+ + W
Sbjct: 767  AIKTWAKSRGIYAAKFGYLGGIHLSVMLVKVCKMLLRVGGVVSAVDIITTFFDHYSRFDW 826

Query: 279  PNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP-----IITPAYPCMNSSYNVSTSTLRV 333
             N V             V+DP  ++  + H  P     ++    P +N++   S  T+++
Sbjct: 827  QNDV-------------VFDPFFHKNLRYHRTPREAMCLLGWHSPTLNTALIASVPTVKI 873

Query: 334  MMDQFQYGNTICEEVELNKAQWSALF-------------EPYLFFESYRNY--LQVDIVA 378
            +  +  +  T   ++  + A W +L                  F  SYR++  L++    
Sbjct: 874  ISAELCHAAT---QLSGDGASWQSLLSIPDSSQDRNMTPSASKFLGSYRSFVNLRIHYWG 930

Query: 379  ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA-------HCAF 431
            A+ +      GW+ESR   L + I R    +L    +P  +VD+  P A         ++
Sbjct: 931  ASLERGSRLVGWLESRCASLLVDINRRV-PELSARIWPARFVDSLTPEADETRGDYQGSY 989

Query: 432  FMGL-----QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWKP 470
             +GL       KP     E  Q ++   +++F KL ++   ++ P
Sbjct: 990  LIGLDWMNSDEKPSRDDLETAQSNLWAVLQQFEKLIVSDEKYFDP 1034


>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
 gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
          Length = 406

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 21/163 (12%)

Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNP---------VMLCAIDEAELGFSV-WDPRKNRRDK 306
           +PN   + +V RFFR+Y  W  PNP         + L      +      WDPR+++ D 
Sbjct: 5   HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64

Query: 307 THHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQ-----------W 355
               P++TPA P  N+ +NV+ + LR +  +F  G+ IC    +  A+           W
Sbjct: 65  MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124

Query: 356 SALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQL 398
           S L EP  FF  ++ YL V +   +A+    +   VES++R L
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 167


>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 1228

 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 171/402 (42%), Gaps = 44/402 (10%)

Query: 28  TEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVE 87
           T  D     +L+  L +  ++ S E+ EKR+     ++ +       L       +    
Sbjct: 619 THPDFHDPADLKLCLADRSIFPSPEDAEKRKAAFKYLKHLILH--GSLPESGETHETGRS 676

Query: 88  DANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE-VTELQPV 146
           + + ++   GSY LGV    +D+D LCVGP  VS    F   +  +    +  V  L+ V
Sbjct: 677 NFSFIVTAVGSYGLGVWTNSSDVDCLCVGP--VSSTTFFELAMQRLRKGADSGVKILRKV 734

Query: 147 LDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDM---SVLNDVDEPTVRSLNGCRV 203
             A   + + + +G+  DL Y     +  R  L++S +     L D+   ++  L   R 
Sbjct: 735 KAATGTMWELEVNGVKFDLQYCPAGAVAERW-LEVSHLPRADPLFDLAYLSLVKLQPYRD 793

Query: 204 ADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 263
              + + + N   F    R +K WAK RG+YS+  G+LGG++  L+++R+ +L P    S
Sbjct: 794 QTYLQRTIKNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTTS 853

Query: 264 M--LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMN 321
           +  ++  FF  Y  + W   ++       ++ F    PR NR  +   M I+T  YP MN
Sbjct: 854 VADILRTFFNHYADFYWMEGMVY------DMNFHRKQPRYNRSPR-ECMVILTLHYPIMN 906

Query: 322 SSYNVSTSTLRVMMDQFQYGNTICEE---VELNKAQWSALFEPYLFFESYRNYLQVDIVA 378
            +   S S++R ++D+    +T+  E   +++N   W                    +  
Sbjct: 907 VARTASISSMRTIVDEMNRADTLISEGRYIKINVQYWG-------------------LSL 947

Query: 379 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           A    L+   GW+ESR   L   I R     LQ   +P  + 
Sbjct: 948 AKGSSLI---GWLESRCLLLLADIHR-KLPDLQTRIWPARFT 985


>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1224

 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/464 (20%), Positives = 189/464 (40%), Gaps = 56/464 (12%)

Query: 37   ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
            EL+  LV +G + +  + E R + +  ++    D     +      +        ++   
Sbjct: 609  ELKGCLVSSGQFPASSDAELRNEAISLLKTTLLD-----SDAESAGNSTRSQVQLVVIPV 663

Query: 97   GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMK 155
            GS+ LGV    +D+D LCVG   +S    F   +  +  A    +  L+ V      +++
Sbjct: 664  GSFGLGVWTSSSDVDCLCVG--NISSRTFFALAIQKLRKASANGIKILRRVKANSGTMLE 721

Query: 156  FKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL---VP 212
             +  G+  DL Y S +  + +   ++      + +    ++SL   + A  +  L   +P
Sbjct: 722  LEIRGIKFDLQYCSAA-AIAQGYPEVFKRPSSDPIFALPLQSLAKLKPARDLFYLRRSIP 780

Query: 213  NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN----AVPSMLVSR 268
            ++  +      +K WAK RG+Y+   G LGG++   ++  VC+   N    A  + +++ 
Sbjct: 781  DMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAASTADVLTS 840

Query: 269  FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNSSYNV 326
            FF  Y+ + W   V+       EL          R  +T   P+    +  P +N++ + 
Sbjct: 841  FFHHYSTFDWATGVVYDPFYHTEL----------RYHRTFREPLCLLGWHGPSLNTASSA 890

Query: 327  STSTLRVMMDQFQYGNTICEEVELNKAQW---------SALFEPYL--FFESYRNYLQVD 375
            S ST+  +  +F    T+  +  +  +++         S+L E     F +SYR Y+++ 
Sbjct: 891  SISTVNALASEFTRAATLLSQEGMTWSKFLGVEQSESPSSLLEKGAADFLDSYRTYIKIS 950

Query: 376  I--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEY---------VDTSK 424
                 ++      + GW+ESRL  + + I R + G +    +P  +          D   
Sbjct: 951  ARYWGSSQQKGRKYLGWLESRLISILVDISRKSPG-IVPRIWPARFTDEEQSSSNTDAEN 1009

Query: 425  PCAHCAFFMGLQRKPGEVVQEGQQFD-----IRGSVEEFKLSIN 463
            P     + +GL++      +           I+G ++EF+  I 
Sbjct: 1010 PELTACYLIGLKKDDAAANKSATSLTTAEGAIQGILQEFESRIQ 1053


>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
           putative [Trypanosoma cruzi marinkellei]
          Length = 285

 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 32/243 (13%)

Query: 230 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLC 285
           RR VY N+  +  GV  A++VARVCQ+ P + P++L+  FF  Y  W   +    PV + 
Sbjct: 2   RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61

Query: 286 AIDEAELGF----SVWDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
              E+          WDPR++  RD    +P+I PAYP +N + NVS   L V   +  Y
Sbjct: 62  TSLESRGRIPGLPDSWDPRRDACRDDL--LPVINPAYPYVNDARNVSRCGLEVFYAELTY 119

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESR 394
            + +    E        +++P+   ++Y  +  V++      +      L  W  +V S+
Sbjct: 120 AHRLLSNSE---TPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSK 176

Query: 395 LRQLTLMIERDTYGKLQCHPYPHEYVDT---SKPCAHC-----AFFMGLQRKPGEVVQEG 446
           LR L   +ER     +   PYP +  D    S P + C     +F +G++ K G    + 
Sbjct: 177 LRILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRFPQK 232

Query: 447 QQF 449
             F
Sbjct: 233 NMF 235


>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
            77-13-4]
 gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
            77-13-4]
          Length = 1208

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/477 (20%), Positives = 195/477 (40%), Gaps = 75/477 (15%)

Query: 30   ADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDA 89
            A +  N  LE FL   G   +  E   R + L  +     D    +++    S  ++   
Sbjct: 586  ATLADNEVLEHFLESQGFLPTAHERAARAEALKALEHALLDATSSVSQGDARSGPVL--- 642

Query: 90   NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
              ++   GSY LGV    +DID LC+G    S     FF L         V  L+  +  
Sbjct: 643  --ILVPVGSYGLGVWTSSSDIDCLCIG----SISPKIFFAL--------AVQRLRRAVTG 688

Query: 150  HVPVMK-----------FKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVR 196
             + +++            +  G+ +DL Y + + +  R  E +          +   T+ 
Sbjct: 689  GIRILRRVKANSGYMLELEVHGIKMDLQYCAAASIAERWPEVMKRPASDPAFALPFQTLA 748

Query: 197  SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
             L   R    + + +P++  +      +K WA+ RG+YS   GFLGG++ ++L+A +C++
Sbjct: 749  KLKPVRDLFYLRRSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAPLCKM 808

Query: 257  YPNAVPSM----LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
              N   ++    ++  FF+ Y  + W   ++       +L          R ++T   P+
Sbjct: 809  LANDGATVSTADIIFTFFQHYARFSWKTALVFDPFFHKDL----------RYNRTFREPL 858

Query: 313  ITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF--EP------- 361
                +  P +N++ N S  T+  +  +F+    +   + +    WS L   EP       
Sbjct: 859  CLLGWHAPALNTAVNASVPTVDAIAAEFERAERL---LSVENFSWSNLLGVEPDSPPSSL 915

Query: 362  -----YLFFESYRNYLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHP 414
                   F ++Y++Y+++D      + +    + GW+ESR   L + ++R     +    
Sbjct: 916  SGPGATEFLQNYKSYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKV-KNIHARI 974

Query: 415  YPHEYVDTSKPCA------HCAFFMGLQR---KPGEVVQEGQQFDIRGSVEEFKLSI 462
            +P  ++D +          H  + +GL R   +P +   +  Q  ++ +++EF+  I
Sbjct: 975  WPARFLDMASSVEGPGTEYHGHYLIGLSRNGEEPNKDDAKATQVALQAALQEFEARI 1031


>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
          Length = 1207

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/436 (22%), Positives = 176/436 (40%), Gaps = 54/436 (12%)

Query: 32   MQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANA 91
            +  +  LE FL   G   +++E   R + +  +  + KD    ++     S         
Sbjct: 592  LANSESLEDFLEGRGCLPNEQERTDRVEAIKTLEMVLKDATSSISENDSRSGPAF----- 646

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL--AEMEEVTELQPVLDA 149
            ++   GSY LGV    +DID LC+GP      + FF +    L  A    V  L+ V   
Sbjct: 647  IVVPVGSYGLGVWTSSSDIDCLCIGPF---SSKTFFALAVQRLKRATTLGVRILRRVKAN 703

Query: 150  HVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQI 207
               +++ + +G+ +DL Y + + +  R  E +          +    +  L   R    +
Sbjct: 704  SGNMLELEVNGIKVDLQYCAAASIAERWPEVMKRPASDPAFALSFQALAKLKPVRDLFYL 763

Query: 208  LKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ--LYPN--AVPS 263
             + +P++  +      +K WA+ RG+YS   GFLGG++ ++L+  VC+   Y N    P+
Sbjct: 764  RRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCKAVAYENETVTPA 823

Query: 264  MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMN 321
             +V  FF  Y+ + W N ++       EL          R ++T   P+    +  P +N
Sbjct: 824  DIVVTFFHYYSEFDWKNSMVFDPFFHKEL----------RYNRTFREPLCLIGWHAPALN 873

Query: 322  SSYNVSTSTLRVMMDQFQYGNTICE--------------EVELNKAQWSALFEPYLFFES 367
            ++   S  T+  +  +F     +                E  L   Q  A  E   F  +
Sbjct: 874  TAPIASIPTVATISSEFGRAKRMLSDDDCIWGKLLGIEPETALGSVQAPAATE---FLHA 930

Query: 368  YRNYLQVD--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD---- 421
            ++ Y+++D      + +    + GW+ESR   L + I R     L    +P  ++D    
Sbjct: 931  FKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINR-KLKHLLARIWPSRFLDVSAG 989

Query: 422  --TSKPCAHCAFFMGL 435
              TS    H  + +GL
Sbjct: 990  AETSGAEYHGCYLIGL 1005


>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
           putative [Trypanosoma cruzi]
          Length = 285

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 32/243 (13%)

Query: 230 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLC 285
           RR VY N+  +  GV  A++VAR+CQ+ P + P++L+  FF  YT W   +    PV + 
Sbjct: 2   RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61

Query: 286 AIDEAELGF----SVWDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
              E+          WDPR++  RD    +P+I PAYP +N + NV   +L V   +  Y
Sbjct: 62  TSLESRGRIPGLPDSWDPRRDACRDDL--LPVINPAYPYVNDARNVGRCSLEVFYAELTY 119

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESR 394
              +   +E        ++EPY   + Y  +  V +     ++      L  W  +V S+
Sbjct: 120 AYRLLSNLE---TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSK 176

Query: 395 LRQLTLMIERDTYGKLQCHPYPHEYVD--------TSKPCAHCAFFMGLQRKPGEVVQEG 446
           LR L   +ER     +   PYP +  D        + +      F +G++ K G    + 
Sbjct: 177 LRILLYALER----LVDARPYPQKLNDGPPRSVPKSGRFLKGSCFIVGIKEKVGRRFPQK 232

Query: 447 QQF 449
             F
Sbjct: 233 NLF 235


>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1263

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/418 (21%), Positives = 172/418 (41%), Gaps = 53/418 (12%)

Query: 38   LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
            L   L   G + +++E  +R++    +R +  +         G S         ++ + G
Sbjct: 620  LRDSLSALGAFPTEDEAARRQEAFELLRDLILENPTGTEVTDGASAAARPRPPLVVTSVG 679

Query: 98   SYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVM-KF 156
            SY LGV  P +DID +C+GP   S        +  I        +L   + A+   M + 
Sbjct: 680  SYGLGVWTPSSDIDVMCIGP--YSSAVFMALAVQRIRKAGARGFKLVRRVRANTGTMLEL 737

Query: 157  KFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNV 214
            +  G+ +DL Y + + +       LD      +  +   T+  L   R  D + + +P++
Sbjct: 738  EVQGVKMDLQYCAATSVAEGWPAVLDRPASDPVFSLPAQTLGKLKAARDLDYLRRSLPDL 797

Query: 215  EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ-LYPNAVPSMLVS----RF 269
              F    R ++ WA+ RG+YS   G+LGG+  ++L+ARVC+ L  +A P + V+     F
Sbjct: 798  AKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARVCKSLARDAGPGLSVADILVTF 857

Query: 270  FRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHH------MPIITPAYPCMNSS 323
            F  Y  + W          +  L F   DP  + +  ++H      + I+    P +N+S
Sbjct: 858  FHHYAAFDW----------QQNLAF---DPFFHNKKLSYHRTFREPLAILGFFPPMLNTS 904

Query: 324  YNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE------------------PYLFF 365
            +  +  ++R M  +F+    +    ++    W A F                      F 
Sbjct: 905  HAATIPSVRAMAGEFRRAAALLASEDVT---WDAFFRGGGPTTVPGPLSATLPSGAADFL 961

Query: 366  ESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
             SY++++++++     +      + GW ESR   + + + R     L    +P  +VD
Sbjct: 962  ASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDVSRRLPNVL-ARMWPERFVD 1018


>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
          Length = 1200

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/424 (21%), Positives = 172/424 (40%), Gaps = 45/424 (10%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
           LE FL   G   +++E   R Q +  +    KD       L    D        ++   G
Sbjct: 592 LEHFLENYGCLPTEQERANRAQAVRALEVALKD-----VDLSASEDDARSGPPFVVVPVG 646

Query: 98  SYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFK 157
           SY LGV    +DID LC+GP      + FF +    L    ++  ++ V      +++ +
Sbjct: 647 SYGLGVWTSSSDIDCLCIGPF---SSKTFFALAVQRLKRAADIRIIRRVKANSGYMLELE 703

Query: 158 FDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVE 215
             G+ +DL Y + + +  R  E +          +   T+  L   R    + + +P++ 
Sbjct: 704 VHGIKVDLQYCAAASIAERWPEVMKRPANDSAFALPFQTLAKLKPVRDLFYLRRSLPDMV 763

Query: 216 HFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNA----VPSMLVSRFFR 271
            +      +K WA+ RG+YS   GFLGG++ ++L+  +C+   +      P+ +V  FFR
Sbjct: 764 QYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSEIVSPTDIVVTFFR 823

Query: 272 VYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNSSYNVSTS 329
            Y+ + W   ++       +L          R ++T   P+    +  P +N++   S  
Sbjct: 824 HYSNFDWKTSMVFDPFFHKDL----------RYNRTFREPLCLIGWHAPALNTAPIASNP 873

Query: 330 TLRVMMDQFQYGNTICEE--------VELNKAQWSALFEPYL-FFESYRNYLQVD--IVA 378
           T+  +  + +  N +  E        + L  AQ +        F + ++ Y+++D     
Sbjct: 874 TVMAIAAEIERANRLLSEDGCTWNSVLGLQSAQEAGKSRGATEFLKEFKTYVKIDAHYWG 933

Query: 379 ANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCA-------HCAF 431
            + +    + GW+ESR   L + + R     L    +P  ++D     A       H  +
Sbjct: 934 PSQEKSGRFIGWLESRCVMLLVDVNR-KLQHLVARIWPSRFIDVFSGGAGGPGEEYHGCY 992

Query: 432 FMGL 435
            +GL
Sbjct: 993 LIGL 996


>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
          Length = 1223

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 172/405 (42%), Gaps = 42/405 (10%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFT- 95
           +L+K L+  G   +++++  R+Q +  +  +       L   +  SDQ       L+   
Sbjct: 600 DLKKTLLSHGYLPTEDDESMRKQAISVLDSVL------LGNDQTKSDQEARTPVGLVLVP 653

Query: 96  FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVM 154
            GS+ LGV    +D+D LC+G   +S +  F   L  +  A  + +  L+ VL     ++
Sbjct: 654 VGSFGLGVWMSSSDVDCLCIG--TISSKTFFRMALQRLRKASDQGIRVLRKVLANTGTML 711

Query: 155 KFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP--TVRSLNGCRVADQILKLVP 212
           + +  G+  DL Y + + +  +    ++  S   +   P  T+  L   R    +L+ +P
Sbjct: 712 ELQILGIKFDLHYCAATSVFEKFPSVMNLPSNHPEFSLPVQTLAKLKPARDMYYLLRSIP 771

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ----LYPNAVPSMLVSR 268
           ++  F      +K WA  RG+Y    G LGG++  +L+  +C+    L      + +++ 
Sbjct: 772 DLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVPICKQLATLSRVVSTTGILAT 831

Query: 269 FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNSSYNV 326
           FF  YT + W   V+L      EL          R  +T   P     +  P +N++   
Sbjct: 832 FFSHYTNFDWEKQVVLDPFFHKEL----------RYHRTSREPFCLLGWHAPALNTAMTA 881

Query: 327 STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL--------FFESYRNYLQVD--I 376
           ST T++ +  +    N++  +  +    W A+  P          F   +++Y++VD   
Sbjct: 882 STPTVKSIATEISKTNSLLSQPGVT---WDAILGPVGAAVAGVQDFLRGFKSYVKVDARF 938

Query: 377 VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
             ++      + GW+ESR   + + + R     L    +P  ++D
Sbjct: 939 WGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLP-RIWPGRFID 982


>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
 gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
          Length = 649

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 138/356 (38%), Gaps = 69/356 (19%)

Query: 90  NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
           + ++   GS R+G   PGAD+D +   P  V   E    +   I A + E   L+ V  A
Sbjct: 294 DGVVHLAGSRRMGCARPGADLDLVAALPGAVGGAE----VRERIAAALPEAERLREVRGA 349

Query: 150 HVPVMKFKFDGLSIDLLYASISRLVVREDLDISD-MSVLNDVDEPTVRSLNGCRVADQIL 208
            VP ++F+  GL +DL+      +V    LD +  ++   ++ E    +L+    AD + 
Sbjct: 350 RVPGLRFRVAGLDVDLV------VVATGGLDPAGALARRAELGEAAAVALSAVSDADAVR 403

Query: 209 KLVPNVEH--FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ----LYPNAVP 262
           + V   EH  F    R +K WA+ RG+ S   G L G+ WA+L AR  +    L P+ + 
Sbjct: 404 ESV-GAEHAAFARLAREVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALSPDGLS 462

Query: 263 ------SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP----- 311
                   L+  FF  +  W W +PV L                       HH P     
Sbjct: 463 PDGLSLDGLLREFFGAWAAWDWCDPVAL-----------------------HHPPPAPGS 499

Query: 312 -----IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFE 366
                ++TP+ P  + +  V    LR ++ +           EL +A  S    P     
Sbjct: 500 EGAVTVLTPSEPVRSCTAQVGPG-LRDLLGR-----------ELYEAWESPQAGPPAPHR 547

Query: 367 SYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT 422
            +  +  V +  A   +     G    RLR L   +E     +    P P E  DT
Sbjct: 548 RHAAWAVVTVRGATPQEFEESLGRTRGRLRALLGALEEGGVAEAHAWPRPFERGDT 603


>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
 gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
          Length = 285

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 32/243 (13%)

Query: 230 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPN----PVMLC 285
           RR VY N+  +  GV  A++VAR+CQ+ P + P++L+  FF  YT W   +    PV + 
Sbjct: 2   RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61

Query: 286 AIDEAELGF----SVWDPRKNR-RDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQY 340
              E+          WDPR++  RD    +P+I PAYP +N + NV    L V   +  Y
Sbjct: 62  TSLESRGRIPGLPDSWDPRRDACRDDL--LPVINPAYPYVNDARNVGRCGLEVFYAELTY 119

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADD------LLAWKGWVESR 394
              +   +E        ++EPY   + Y  +  V +     ++      L  W  +V S+
Sbjct: 120 AYRLLSNLE---TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSK 176

Query: 395 LRQLTLMIERDTYGKLQCHPYPHEYVD-----TSKP---CAHCAFFMGLQRKPGEVVQEG 446
           LR L   +ER     +   PYP +  D       KP        F +G++ K G    + 
Sbjct: 177 LRILLYALER----IVDARPYPQKLNDVPPRSVPKPGRFLKGSCFIVGIKEKVGRRFPQK 232

Query: 447 QQF 449
             F
Sbjct: 233 NMF 235


>gi|53136848|emb|CAG32753.1| hypothetical protein RCJMB04_34p17 [Gallus gallus]
          Length = 109

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/91 (39%), Positives = 59/91 (64%)

Query: 14  KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
           K YG+T PIS+A P E D    ++L + L   G++E +EE ++R  +LG++  + K+W++
Sbjct: 17  KHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 76

Query: 74  ELTRLRGYSDQMVEDANALIFTFGSYRLGVH 104
           E++  +     ++E+    IFTFGSYRLGVH
Sbjct: 77  EISESKNLPQSVIENVGGKIFTFGSYRLGVH 107


>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
 gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 925

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 148/368 (40%), Gaps = 65/368 (17%)

Query: 84  QMVEDA--NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVT 141
           ++V DA    ++   GS R+G   PGAD+D +   P  V         L ++  E+   +
Sbjct: 577 RLVADALPGGVVHVAGSRRMGCALPGADLDLVAALPGTVE--------LGSLRRELGGAS 628

Query: 142 ELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD---------ISDMSVLNDVDE 192
           E++ V+ A VP ++ +FDGL +DL   +   +   E +D            +S ++D  E
Sbjct: 629 EVREVVGARVPGLRLRFDGLDVDLAVVATGAMDPGEAVDRRAELGEAAALALSAVSDA-E 687

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 252
             + S+ G   A            F    R +K WA+ RG+ S   G L G+ W++L AR
Sbjct: 688 AVLASVGGRGPA------------FAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAAR 735

Query: 253 VCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPI 312
                 +  PS L+  FF  +  W W  PV    ++ A  G                + +
Sbjct: 736 TAGEAGDLPPSCLLRHFFATWAAWDWREPV--GGLEGAPAG---------------PLTV 778

Query: 313 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYL 372
            TP+ P  + +  V+     ++  +      + EE     A W+ +  P      +R + 
Sbjct: 779 ATPSAPVRSCTDQVTADMRDLITQELFRAWELLEE----GASWTEVLAPPPL---HRRHA 831

Query: 373 QVDIVAANAD-DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
              +V A A  D +  +G V  R+R L   +     G   CH +P  +       A   +
Sbjct: 832 AWAVVTAGAGTDGVVDEGRVRGRMRALITDLAGLAPG---CHAWPRPFA-----TAPVRY 883

Query: 432 FMGLQRKP 439
            +GL   P
Sbjct: 884 AIGLGPTP 891


>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
          Length = 62

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/43 (76%), Positives = 37/43 (86%)

Query: 221 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 263
           LRC+K WAK RGVYSNV GFLGG+ WA+LVARVCQLYPN  P+
Sbjct: 2   LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44


>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
 gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
          Length = 961

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 141/359 (39%), Gaps = 39/359 (10%)

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
           +   GS RLG   PGAD+D +   P  +    D   +   + + + E + ++ V    VP
Sbjct: 591 LHVTGSRRLGCALPGADLDLVAALPGPI----DLDAVEVQVRSALPEASTVRRVEAIRVP 646

Query: 153 VMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLV- 211
            ++    GL  DL         VR +  ++    L    E    +L+    AD +L+ V 
Sbjct: 647 CLELCAVGLDADLTLVDAG--AVRPEHAVARRLELG---EAAAMALSAVTDADALLEAVD 701

Query: 212 ---------PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVP 262
                       E F    R +K WA+ +G+ +   G L G+ W +L ARV    P+  P
Sbjct: 702 AASAPSAAPRRREAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDAPDLEP 761

Query: 263 SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV-WDPRKNRRDKTHHMPIITPAYPCMN 321
             L+SRFF  +  W +  P+   A+D +        DP +          I TP  P  +
Sbjct: 762 GPLLSRFFGAWAAWDFRRPI---ALDPSAPAVGTPGDPVR----------IATPTAPVRS 808

Query: 322 SSYNVSTSTLRVMMDQ-FQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAAN 380
            S  V  + L  + D+ +     +   +   +     L  P      +  +  + + A  
Sbjct: 809 CSDTVGAAALATLSDELYSAWEAVESALAAGRDPLPDLLAPPPLHRRHAAWAVITVEAPE 868

Query: 381 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKP 439
            + + +  GWV  R+R L    ER   G L+   +PH +    +   H    +GL + P
Sbjct: 869 PEGVASGLGWVRGRIRALLSSFERAGVGDLRA--WPHAFDRGPRLARHA---IGLGKSP 922


>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
 gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
          Length = 1368

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/441 (21%), Positives = 178/441 (40%), Gaps = 51/441 (11%)

Query: 22   ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGY 81
            I +  P +  +     L++ + E  +  S+EE +KR+     ++ I  D        +  
Sbjct: 703  IKLVTPLDGPLSEPGSLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPP 762

Query: 82   SD--------QMVEDANALIFT-FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL-- 130
            +         Q   +   LI T  GS+ LGVH   +DID L +GP   +     FF L  
Sbjct: 763  TTDLTTTSETQPRSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTTT----FFSLAI 818

Query: 131  --------HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
                      + ++  +   L+ +  +   +++     +  DL Y   + +       +S
Sbjct: 819  QRLRRASSSPLYSQEHQPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILS 878

Query: 183  DMSVLNDV---DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTG 239
                 N V      T+  L   R  D + + VP++  F    R ++ WAK RGVY+   G
Sbjct: 879  TAPPGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFG 938

Query: 240  FLGGVNWALLVARVCQLYP-------NAVPSMLVSRFFRVYTMWRWPNPVM---LCA--- 286
            +LGG+  ++++ARV +                LV+ FF  Y  + W   ++   +C    
Sbjct: 939  YLGGIQISVMLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWLR 998

Query: 287  IDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICE 346
            +   + G    +    RR     M ++    P +N+S   S  ++R + D+F+    +  
Sbjct: 999  LKREKGG----EKEVYRRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKDEFKRARDLLV 1054

Query: 347  EVELNKAQWSALFE---PYLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLM 401
            + E+    W    +      F   Y++Y++VD+     ++     + GW+ESR   L + 
Sbjct: 1055 KGEVKS--WKEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVD 1112

Query: 402  IERDTYGKLQCHPYPHEYVDT 422
            + R   G +    +P  +V+ 
Sbjct: 1113 LHRRAPG-VYVRMWPGRFVEA 1132


>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
          Length = 1215

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 178/411 (43%), Gaps = 48/411 (11%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           EL+  LV  G + +  + E R++ +  +++   +   + T         V+    ++   
Sbjct: 600 ELKDSLVSNGQFPTASDAELRQEAIALLQRTLLE--NDTTAAEAEKRSHVQ---LVLIPV 654

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPVMK 155
           GS+ LGV    +DID LCVG   +S +  F   +  +  A    +  L+ V+     +++
Sbjct: 655 GSFGLGVWTSLSDIDCLCVG--NISSKTFFSLAVQKLKKASTSGIKILRRVMANTGTMLE 712

Query: 156 FKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL---VP 212
            +  G+  DL Y + +  + +   D+      + V    V+S+   + A  ++ L   +P
Sbjct: 713 LEIHGIRFDLQYCAAAA-IAQGYPDVLKRPASDPVFSLPVQSIAKLKPARDLVYLRRSIP 771

Query: 213 NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN----AVPSMLVSR 268
           ++  +      +K WA+ RG+YS   G LGG++   L+  VC+   N    A  + +++ 
Sbjct: 772 DMTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLVPVCKALANEPEAASTADILTS 831

Query: 269 FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHM---PIITPAY--PCMNSS 323
           FF  Y+ + W   V             V+DP  +R  K H     P+    +  P +N++
Sbjct: 832 FFYHYSTFDWETGV-------------VFDPFYHRDLKYHRTFREPLCLLGWHGPSLNTA 878

Query: 324 YNVSTSTLRVMMDQFQYGNTICEEVELNKAQW---------SALFEPYL--FFESYRNYL 372
            + S ST+  +  +      +  +  +  +++         S+L E     F +SY+ Y+
Sbjct: 879 SSASISTVNALASELTRAAALLSQDGMTWSKFLGLELSGTPSSLIEKGAADFLDSYQTYI 938

Query: 373 QVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD 421
           ++      ++      + GW+ESR   + + I R T G L    +P  ++D
Sbjct: 939 KISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLG-LVPRIWPARFID 988


>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
          Length = 382

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
           VM+++F+ G  + +E+   K+ WS L EP  FF+ YR+Y+ +   A+  ++ L W G VE
Sbjct: 3   VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62

Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF----FMGL---QRKPGEVVQE 445
           S++R L   +ER+ +  L  H  P  +    +      +    F+G+   + +  E V  
Sbjct: 63  SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121

Query: 446 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 505
              +DI+   +      N     K GM+I  +H+++KQ+  Y+  E  ++ +   L+   
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVN 181

Query: 506 RSS 508
           RSS
Sbjct: 182 RSS 184


>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
          Length = 62

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/43 (74%), Positives = 37/43 (86%)

Query: 221 LRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS 263
           LRC+K WAK RGVYSNV GFLGG+ WA+LVAR+CQLYPN  P+
Sbjct: 2   LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44


>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
            2508]
          Length = 1329

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/439 (21%), Positives = 176/439 (40%), Gaps = 47/439 (10%)

Query: 22   ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGY 81
            I +  P +  +     L++ + E  +  S+EE +KR+     ++ I  D        +  
Sbjct: 664  IKLVKPLDGPLSEPGSLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPS 723

Query: 82   SD--------QMVEDANALIFT-FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI--- 129
            +         Q   +   LI T  GS+ LGVH   +DID L +GP   +    FF +   
Sbjct: 724  TTDLTTTSETQPRSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQ 780

Query: 130  -LHNILAEMEEVTELQPVLDAHV-----PVMKFKFDGLSIDLLYASISRLVVREDLDISD 183
             L    +      E QP +   +      +++     +  DL Y   + +       +S 
Sbjct: 781  RLRRAASSPLYSQEYQPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILST 840

Query: 184  MSVLNDV---DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
                N V      T+  L   R  D + + VP++  F    R ++ WAK RGVY+   G+
Sbjct: 841  APPGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGY 900

Query: 241  LGGVNWALLVARVCQLYP-------NAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----D 288
            LGG+  ++++ARV +                LV+ FF  Y  + W   ++   +      
Sbjct: 901  LGGIQISVMLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQ 960

Query: 289  EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV 348
            + E G    +    +R     M ++    P +N+S   S  ++R + ++F+    +  + 
Sbjct: 961  KREKGG---EKEVYKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDLLVKG 1017

Query: 349  ELNKAQWSALFE---PYLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIE 403
            E+    W    +      F   Y++Y++VD+     ++     + GW+ESR   L + + 
Sbjct: 1018 EVKS--WKEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLH 1075

Query: 404  RDTYGKLQCHPYPHEYVDT 422
            R   G +    +P  +V+ 
Sbjct: 1076 RRAPG-VYVRMWPGRFVEA 1093


>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
            2509]
          Length = 1330

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/439 (21%), Positives = 176/439 (40%), Gaps = 47/439 (10%)

Query: 22   ISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGY 81
            I +  P +  +     L++ + E  +  S+EE +KR+     ++ I  D        +  
Sbjct: 665  IKLVKPLDGPLSEPGSLKEAMAELNILPSQEETDKRKAAFQALKAILLDTPPPSQSPQPS 724

Query: 82   SD--------QMVEDANALIFT-FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFI--- 129
            +         Q   +   LI T  GS+ LGVH   +DID L +GP   +    FF +   
Sbjct: 725  TTDLTTTSETQPRSNQPPLIITPVGSFALGVHTSSSDIDVLAIGPFSTT---TFFSLAIQ 781

Query: 130  -LHNILAEMEEVTELQPVLDAHV-----PVMKFKFDGLSIDLLYASISRLVVREDLDISD 183
             L    +      E QP +   +      +++     +  DL Y   + +       +S 
Sbjct: 782  RLRRAASSPLYSQEYQPKILRRISSSTGTMLELSLCQIKFDLQYCPAAHIASHWPRILST 841

Query: 184  MSVLNDV---DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF 240
                N V      T+  L   R  D + + VP++  F    R ++ WAK RGVY+   G+
Sbjct: 842  APPGNAVWSLPALTLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGY 901

Query: 241  LGGVNWALLVARVCQLYP-------NAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----D 288
            LGG+  ++++ARV +                LV+ FF  Y  + W   ++   +      
Sbjct: 902  LGGIQISVMLARVYKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQ 961

Query: 289  EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV 348
            + E G    +    +R     M ++    P +N+S   S  ++R + ++F+    +  + 
Sbjct: 962  KREKGG---EKEVYKRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDLLVKG 1018

Query: 349  ELNKAQWSALFE---PYLFFESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIE 403
            E+    W    +      F   Y++Y++VD+     ++     + GW+ESR   L + + 
Sbjct: 1019 EVKS--WKEFLKGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLH 1076

Query: 404  RDTYGKLQCHPYPHEYVDT 422
            R   G +    +P  +V+ 
Sbjct: 1077 RRAPG-VYVRMWPGRFVEA 1094


>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
          Length = 1256

 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 187/439 (42%), Gaps = 60/439 (13%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAH 150
            ++ T GS  LGV    +DID LCVG   +S    F  I+  +   ++  V  ++ V  A 
Sbjct: 682  VVTTVGSSGLGVWTESSDIDCLCVGS--ISANVFFELIIQRLRNRIDLGVKIIRRVKPAF 739

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ + +G+  DL Y   + +  R  E  ++   S L ++       L   R    + 
Sbjct: 740  GTMLELEVNGIKFDLQYCPAAAVAERWLEVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 799

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 266
            + + N   F    R +K WAK RG+YS+  G+LGG++  L+++R+ +L P    S   ++
Sbjct: 800  RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859

Query: 267  SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
              FF  Y  + W    +   I   +       P +N R     M I T   P +N + + 
Sbjct: 860  CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912

Query: 327  STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-------------FFESYRNYLQ 373
            S  ++R ++D+ +    +  E     A W+ L   Y              F +SY +Y++
Sbjct: 913  SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969

Query: 374  VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTS 423
            +++       A    L+   GWVESR   L   + R+ +  +Q   +P  +      + S
Sbjct: 970  INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYRE-FPDIQARIWPARFTQNEDHENS 1025

Query: 424  KPCA-----HCAFFMGLQ---------RKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMF 467
             P          + +GL+         R   ++ ++  Q  ++ S+++F  S+  N   F
Sbjct: 1026 TPAQEKHEYQGCYLIGLRKADHATDPTRTFSKLDRKLAQDTLQASMDQFASSVQSNKKYF 1085

Query: 468  WKPGMEICVSHIRRKQIPP 486
                  + V+H+++  + P
Sbjct: 1086 NLASAWVDVTHVKQDSLGP 1104


>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
          Length = 1256

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 187/439 (42%), Gaps = 60/439 (13%)

Query: 92   LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEME-EVTELQPVLDAH 150
            ++ T GS  LGV    +DID LCVG   +S    F  I+  +   ++  V  ++ V  A 
Sbjct: 682  VVTTVGSSGLGVWTESSDIDCLCVGS--ISANVFFELIIQRLRNRIDLGVKIIRRVKPAF 739

Query: 151  VPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
              +++ + +G+  DL Y   + +  R  E  ++   S L ++       L   R    + 
Sbjct: 740  GTMLELEVNGIKFDLQYCPAAAVAERWLEVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 799

Query: 209  KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM--LV 266
            + + N   F    R +K WAK RG+YS+  G+LGG++  L+++R+ +L P    S   ++
Sbjct: 800  RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859

Query: 267  SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNV 326
              FF  Y  + W    +   I   +       P +N R     M I T   P +N + + 
Sbjct: 860  CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912

Query: 327  STSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-------------FFESYRNYLQ 373
            S  ++R ++D+ +    +  E     A W+ L   Y              F +SY +Y++
Sbjct: 913  SIPSMRKIVDEMKRAENLISE---GNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIK 969

Query: 374  VDI-----VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV-----DTS 423
            +++       A    L+   GWVESR   L   + R+ +  +Q   +P  +      + S
Sbjct: 970  INVQYWSLSLAKGSSLV---GWVESRCLDLLDDLYRE-FPDIQARIWPARFTQNEDHENS 1025

Query: 424  KPCA-----HCAFFMGLQ---------RKPGEVVQEGQQFDIRGSVEEFKLSI--NMYMF 467
             P          + +GL+         R   ++ ++  Q  ++ S+++F  S+  N   F
Sbjct: 1026 TPAQEEHEYQGCYLIGLRKADHATDPTRTFSKLDRKLAQDTLQASMDQFASSVQSNKKYF 1085

Query: 468  WKPGMEICVSHIRRKQIPP 486
                  + V+H+++  + P
Sbjct: 1086 NLASAWVDVTHVKQDSLGP 1104


>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
          Length = 281

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 41/272 (15%)

Query: 84  QMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTEL 143
           Q  +D   ++  FGS+ LG +     ++   V P  + R  DFF     +L E   +  +
Sbjct: 31  QTRQDIECILSPFGSFGLGGYIKNDVVELALVCPYQIHRS-DFFKFFPELLKEQSLINNI 89

Query: 144 QPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRV 203
           +                ++I  +   + R+  R  ++  D S+L D+D+ ++ +++G R+
Sbjct: 90  E----------------VNISFIRLKLERVTHR--INFLDNSLLQDMDDASLATMDGPRL 131

Query: 204 ADQILK--LVP-NVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV---CQLY 257
            +Q  K  + P NV  F  +L+C+K+WA +RG+Y+   G+L      LL+ +     Q  
Sbjct: 132 -NQFNKSQIKPSNVRLFQVSLQCIKYWAIQRGLYNAEIGYLNETACTLLLIKTFMFIQSK 190

Query: 258 PNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD-------KTHHM 310
                ++++  FF++++ W W  PV+L           + D   N+ +       +   M
Sbjct: 191 EKLSITIILQNFFQMWSKWPWKTPVILTN--------HIPDKNGNKLEYSSITGSQKAMM 242

Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGN 342
           PII+P YP  + +  V+  T + +  +F+ GN
Sbjct: 243 PIISPCYPVYSVTPYVTKLTQKTIQLEFERGN 274


>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 457

 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 45/261 (17%)

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM---- 264
           + +P++  F    R +K WA+RRG+YS+  G+LGG++  LL+AR+C L      ++    
Sbjct: 6   RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65

Query: 265 LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP------IITPAYP 318
           +++ FF+ Y  + W   V             V+DP   +    +  P      I++   P
Sbjct: 66  IITTFFKHYAQFNWEKQV-------------VYDPSFYKSPPRYFRPQREPLVILSQHQP 112

Query: 319 CMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL----FFESYRNYLQV 374
            +N +   S  + R ++ +FQ  + +  + ++   Q +   E       F +SYR+Y +V
Sbjct: 113 KVNVARAASIPSTRTLVQEFQRADKLLSQQDVTWEQLAGSIENSTGADEFLKSYRSYAKV 172

Query: 375 DIV----AANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHC- 429
           ++     AA    +L   GW+E R   ++L++     G+L   P    ++    P  H  
Sbjct: 173 NVQYWGGAATKGRMLV--GWLEWRC--VSLLV-----GRLHPLPTFQRHIHRKFPDIHAR 223

Query: 430 ---AFFMGLQRKPGEVVQEGQ 447
              A F  ++ + GE  +E Q
Sbjct: 224 IWPARFTDME-EVGETTKEYQ 243


>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 359

 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           A+  +   GS R+G   PGAD+D +   P       +   +   + A + E T ++ V+ 
Sbjct: 23  ADGCVHLVGSRRMGCELPGADLDLVAALPG----SPELAGVRARLTAALPEATGVREVVG 78

Query: 149 AHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           A VP ++    GL++DL+  +   +   E +         ++ E    +L+    AD +L
Sbjct: 79  ARVPGLRMSVGGLAVDLVVVATGAVDPAEAVGRR-----TELGEDAAIALSAVSDADALL 133

Query: 209 KLVPNV-EHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS-MLV 266
             V +  E F    R +K WAK RG+ S   G L G+ W++L AR  +    A+PS  L+
Sbjct: 134 DQVADRREAFTDLARRVKAWAKARGLDSAPFGGLPGLAWSVLAARTVR-EAGALPSDELL 192

Query: 267 SRFFRVYTMWRWPNPV 282
             FF  +  W W  PV
Sbjct: 193 RHFFATWAAWDWREPV 208


>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
          Length = 1195

 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 173/419 (41%), Gaps = 64/419 (15%)

Query: 83   DQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE--- 139
            DQ       ++   GSY LG     +DID LC+G    S     FFIL            
Sbjct: 623  DQTRGRPAIMLVPVGSYGLGTWSRTSDIDCLCIG----SISPRVFFILARQRLRKSGNPG 678

Query: 140  VTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLN 199
            V  L+ V      +++ +  G+  DL Y      VV +  D+      +      +++L 
Sbjct: 679  VRLLRKVKAKTGTMLEVEILGVKCDLQYCQAPS-VVEQWPDMLKRPPSDPAFSLPMQTLL 737

Query: 200  GCRVADQILKL---VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ- 255
              + A  +  L   VP++  F  + + +K WAK RG+Y+   G+LGG++ ++++ +VC+ 
Sbjct: 738  KLKPARDLFYLQRSVPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVKVCKM 797

Query: 256  -LYPNAVPSM--LVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP- 311
             L+   V S   +++ FF  Y+   W   +             V+DP  ++  K H  P 
Sbjct: 798  LLHDGGVVSTADIITTFFDHYSQLDWQRDM-------------VFDPFFHKNLKYHRTPR 844

Query: 312  ----IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE------- 360
                ++    P +N++   S  T +++  +     T   ++  +   W +L         
Sbjct: 845  EAMCLLGWHSPTLNTALTASVPTTKIISAELCQATT---QLSRDGTSWQSLLSIPDSSHS 901

Query: 361  ------PYLFFESYRNY--LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQC 412
                     F  S+R++  L+V    A+ +      GW+ESR   L + + +    +L  
Sbjct: 902  KNMTPGASNFLGSFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKRV-PELSA 960

Query: 413  HPYPHEYVDTSKPCA-------HCAFFMGLQ-----RKPGEVVQEGQQFDIRGSVEEFK 459
              +P  +VD+S   A         ++ +GL+      KP +   E    ++R  +++F+
Sbjct: 961  RIWPARFVDSSSSEAKGTQGDYQGSYLVGLEWMNSDEKPSKDDLEAAHSNLRAVLQQFE 1019


>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
          Length = 63

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/60 (56%), Positives = 45/60 (75%)

Query: 310 MPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYR 369
           MPIITPAYP  NS+YNVS ST  VM+++F+ G  I +E+ L+KA+WS LFE   FF+ Y+
Sbjct: 1   MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60


>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
 gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
          Length = 95

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 33/39 (84%)

Query: 402 IERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 440
           IERDT G LQCHPYP+EY+D SK C HCAFFMGLQRK G
Sbjct: 6   IERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEG 44


>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
 gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
          Length = 104

 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 43/57 (75%)

Query: 446 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLA 502
           G+QFDIR +V+EF+ S+ MY  WKPGMEI VSHI+R+ IP +VFP G +  R  +++
Sbjct: 1   GEQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTKMS 57


>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
           91-03]
 gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
           91-03]
          Length = 985

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 131/340 (38%), Gaps = 45/340 (13%)

Query: 90  NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
           + ++   GS R+G   PGAD+D +   P  V    +   +   +   + E  +++ V+ A
Sbjct: 638 DGVVHVVGSRRMGCALPGADLDLVAALPGTV----ELAAVQAELSKALPEAADVREVVGA 693

Query: 150 HVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILK 209
            VP ++ + D L +DL+  +   +   E +D        ++ E    +L+    AD +L 
Sbjct: 694 RVPGLRLRLDRLDVDLVVVATGSMDPAEAVDRR-----VELGEAAAVALSAVSDADAVLA 748

Query: 210 LV-PNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSR 268
               +   F    R +K WA+ RG+ S   G L G+ W++L AR      +  P  L+  
Sbjct: 749 SAGAHGPAFARLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLRH 808

Query: 269 FFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMP--IITPAYPCMNSSYNV 326
           FF  +  W W  PV                       ++H +P  I TP+ P    +  V
Sbjct: 809 FFATWAAWDWRTPVGPAG-------------------QSHALPLTITTPSAPIRPCTDQV 849

Query: 327 STSTLRVMMDQFQYGNTICEEVELN---KAQWSALFEPYLFFESYRNYLQVDIVAANADD 383
           +     ++  +      + E    +   +  W+ L  P      +R +    +V A    
Sbjct: 850 TAGMRDLVTQELFRAWEVLEGAPTDPTARYPWAELLAPPPL---HRRHAAWAVVTAG--- 903

Query: 384 LLAWKGWVESRLRQLTLMIERDTYGKL-QCHPYPHEYVDT 422
                G  E RLR  T  +  D       CH +P  +  T
Sbjct: 904 ----PGADEGRLRGRTRSLITDLAETTPDCHAWPRPFTTT 939


>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
          Length = 665

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 155/411 (37%), Gaps = 110/411 (26%)

Query: 96  FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTEL-QPVLDAHVPVM 154
           FGS   G     +DID L     ++   EDFF      L   E    + Q +  A +P++
Sbjct: 119 FGSGMFGGFDKHSDIDVLLSSFKFLLSREDFFSKFSAYLKSPEVGAIIHQEIPQAQIPII 178

Query: 155 KFKFDGLSIDLLYASI-------SRLVVREDLDISDMS--VLNDVDEPTVRSLNGCRVAD 205
           KF+F     D+LY S+        R  + +D    + S  V   VD  + R  + C+   
Sbjct: 179 KFEFMSKQFDVLYCSMLTPISQHQRCQLEKDQYFFEFSNVVQEKVDVFSFRGWSNCQYMY 238

Query: 206 QILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL--------- 256
           + +K   + E F   L+ +K WAK++G+Y    G+L G++  +++ +V ++         
Sbjct: 239 ERIK---DKEAFGWGLKIIKAWAKKKGLYGFNFGYLNGISLIIMLGKVDKMIRRERFQSD 295

Query: 257 -----------------YPNAVPSM----------LVSRFFRVYTMWRWPNPVMLCAIDE 289
                             PN               LV++FF VY+ W    P+     + 
Sbjct: 296 YCDDTLSRNVNNQLSFTIPNRTLKSNNKIEDRVCELVTKFFEVYSKWDSKQPIFFQDNNS 355

Query: 290 AELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV- 348
             +   ++             PI+TP  P   +++ ++TS+L  +M+Q Q    +C  + 
Sbjct: 356 WSMDQDLYSVCLKEV-----FPIVTPERPYKCTTHQINTSSLNHIMEQLQTAQNLCILIQ 410

Query: 349 ----------------------------------ELNKAQWSALFEPYLFFESYRNYLQV 374
                                             E  +  W  LF PY FF  +  +LQ+
Sbjct: 411 KRQLILDLVKYQNDNAFDKFGNPKKDNYNLSILKEFGQVTWKDLFNPYQFFTQHTIFLQI 470

Query: 375 DIVA------ANADDL---------------LAWKGWVESRLRQLTLMIER 404
           +++        N D++                 +KG  ESR + L LM+E+
Sbjct: 471 EVMTDVNISQYNYDNVPDDPIGQYEVVLKHHHEYKGLFESRFKLLQLMMEQ 521


>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
          Length = 1142

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/390 (21%), Positives = 159/390 (40%), Gaps = 37/390 (9%)

Query: 126 FFFIL---HNILAEMEEVTELQPVLDAHVPVM-KFKFDGLSIDLLYASISRLV--VREDL 179
            FF L   H   A  ++V  L+ V +AH   M +    G+ +DL Y + +++       L
Sbjct: 615 IFFTLAVKHLKNAAAQDVRILRKV-EAHSGTMLELNIQGIRLDLQYCAAAQIAGCWPAPL 673

Query: 180 DISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTG 239
            +     L  +   T+  L   R    +    P++  F    R L  WA+ RG+Y+   G
Sbjct: 674 SLPPTDPLFSLPLQTLSKLKAIRDLAHLQNTTPDLPAFQMAYRLLVVWARSRGIYAARFG 733

Query: 240 FLGGVNWALLVARVCQLYPNA----VPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFS 295
           +L G + +L++ R+ +L  ++      + LV  FFR Y  + W    +   +  A  G  
Sbjct: 734 YLSGTHISLMLDRIAKLLYHSNRDVTAADLVCAFFRYYAEFDWSKNTVEDPLARAIPGMG 793

Query: 296 VWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEV--ELNKA 353
               R  +R  +  M ++    P +N +   +   + V+ ++ Q  + +  +   + +  
Sbjct: 794 ----RPYQRHASEPMVVLGYHIPRVNIARAATVPAVGVLTEELQRAHALVTKQPEQGSTP 849

Query: 354 QWSALF-----EPYLFFESYRNYLQVDIVAANADDLLAWK--GWVESRLRQLTLMIERDT 406
            W+ +          F  +YR+Y++VD+       +   +  GWVESR   L + + R  
Sbjct: 850 TWAEIIGEERNSAAEFLSAYRSYIRVDVQYWGTSSVKGRQLIGWVESRCPTLLIDLNRKI 909

Query: 407 YGKLQCHPYPHEY---VDTSKPCAHCAFFMGLQRK-------PGEVVQEGQQFDIRGSVE 456
             ++    +P  +       K   H  + +GL ++         E  ++  Q  + G +E
Sbjct: 910 -PEIHARMWPLRFARGASNEKGDQHGCYLVGLAKRQDSDSDSKTEADRKLAQSKLDGVLE 968

Query: 457 EFKLSI--NMYMFWKPGMEICVSHIRRKQI 484
            F   I  N   F      + VSH+ R ++
Sbjct: 969 RFSDQIRGNEKFFDPTSGWVEVSHVSRAKL 998


>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
           206040]
          Length = 1209

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 80/398 (20%), Positives = 171/398 (42%), Gaps = 51/398 (12%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIA--KDWVKELTRLRGYSDQMVEDANALIF 94
           EL+  LV +G + +  E   R++ +  +++I   +D    +   R            ++ 
Sbjct: 596 ELKASLVSSGQFPTTAEANLRKEAIDLLQRILIEEDATAAVAETRS-------KVQLVLI 648

Query: 95  TFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AEMEEVTELQPVLDAHVPV 153
             GS+ LGV    +DID LCVG   +S    F   +  +  A  E V  L+ V+     +
Sbjct: 649 PVGSFGLGVWTDLSDIDCLCVG--NISTRVFFNLAVQKLRKASAEGVKILRRVMANTGTM 706

Query: 154 MKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL--- 210
           ++ +  G+  DL Y + +  + +   D+      + V    +++L   + A  +  L   
Sbjct: 707 LELEIRGIKFDLQYCAAAA-IAQGYPDVLKRPSSDPVFALPLQTLAKLKPARDLFYLRRS 765

Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSM----LV 266
           +P++  +      +K WA+ RG+Y+   G LGG++ + ++  +C+   N   ++    ++
Sbjct: 766 IPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGIHISSMLVPICKALANESEAVSTADIL 825

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKN---RRDKTHHMPIITPAY--PCMN 321
           + FF+ Y+ + W            E G  V+DP  +   +  +T   P+    +  P +N
Sbjct: 826 TTFFQHYSKFNW------------ETGM-VFDPFYHLGLKYHRTFREPLCLLGWHGPSLN 872

Query: 322 SSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-----------FFESYRN 370
           ++   S ST+  +  +      +  + ++  +++  L +              F  SYR+
Sbjct: 873 AASTASISTVNALTSELVRAAALFHQQDVTWSRFLGLEQSATPLTLIEKGAADFLNSYRS 932

Query: 371 YLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDT 406
           Y+++      ++      + GW+ESR   + + I R +
Sbjct: 933 YIKISARYWGSSQQKGRKYLGWLESRCISILVDISRKS 970


>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
 gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
          Length = 430

 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 33/264 (12%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHV 151
           L+ T GS R+G   PGAD+D + V P       D   +   + A +     L+ V  A V
Sbjct: 77  LVRTVGSRRMGCALPGADLDLVAVLPG----PADAAGVRARVAAALPGARRLREVTGARV 132

Query: 152 PVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLV 211
           P ++    GL +DL+      L    D  ++ ++   ++ E    +L+    AD + + V
Sbjct: 133 PGLRLHAYGLDVDLVLVGAGAL----DPGLA-VARRAELGEAAAVALSALDDADAVRESV 187

Query: 212 PNVEH--FCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAV-------P 262
               H  F +  R  K WA+ RG+ S   G L G+ WA+L AR  +    AV       P
Sbjct: 188 -GASHAAFASLAREAKAWARARGLDSAPFGGLPGLAWAVLAARTVR---EAVRDAADLSP 243

Query: 263 SMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNS 322
           + L   FF  +  W W  PV L   D A            R      + ++TP  P  + 
Sbjct: 244 AGLRREFFGTWAAWDWSEPVSLLPADGA-----------GRSPSPDPVTVLTPRAPVRSC 292

Query: 323 SYNVSTSTLRVMMDQFQYGNTICE 346
           +  V      +++ +      + E
Sbjct: 293 TAQVGPGMRDLLVRELYRAWEVLE 316


>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
          Length = 293

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 12/192 (6%)

Query: 301 KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE 360
           K RR     MPI+ P  P    + N++  T + + ++   G  + +E   +  +W  LF 
Sbjct: 84  KARRPDGSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFA 143

Query: 361 PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
           P+ +   Y  +L++ + A  +++L  W GWV+SR R L L +E  + G ++C P      
Sbjct: 144 PFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE--SIG-VECDP------ 194

Query: 421 DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWK---PGMEICVS 477
           D+++   H  F   +    G + +     DI    E+F   +   ++ K      ++ +S
Sbjct: 195 DSTEEVDHTVFEPSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMS 254

Query: 478 HIRRKQIPPYVF 489
            +R  Q+P  ++
Sbjct: 255 IVRSSQLPKSLY 266


>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
           44229]
 gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
           44229]
          Length = 892

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 131/356 (36%), Gaps = 63/356 (17%)

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVP 152
           +   GS R G   P  D+D + V  +  +       +   +   +   + L+PV+ A  P
Sbjct: 573 VHVVGSRRTGCALPDGDLDLITVASAADA-------VAERVRVALPAASALRPVVGARSP 625

Query: 153 VMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVP 212
             +    GL +DL  A           + +  S L D              A+ +L  V 
Sbjct: 626 GWRLDVGGLGVDLTVAVAG--------NPAAWSSLGD--------------AEAVLAAVG 663

Query: 213 N-VEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFR 271
           + V+ F    R +K WA+ RG+ S   G + GV WA+L AR      +      ++ FF 
Sbjct: 664 DRVDRFRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFDGGGLAEFFG 723

Query: 272 VYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTL 331
            +  W W +P+ L A+ E   G  V               I+TPA P  + +  V     
Sbjct: 724 TWAAWDWRDPIGLGAVPE-RTGAPV--------------TIMTPAAPVRSCTEQVGPGFR 768

Query: 332 RVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWV 391
            ++  +      + E    + A       P L    +R +    +V    D +    G V
Sbjct: 769 DLLTAELYRAWEVVEAGGTDLAT-----PPDL----HRVHAAWAVVTVPHDRV----GPV 815

Query: 392 ESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQ 447
             RLR L   +E          P P E    +       F +GL R+P +V + G+
Sbjct: 816 RGRLRALLTALETAGVADADAWPRPFERDRDA-----VRFAIGLGRRPPDVAELGR 866


>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
            ARSEF 2860]
          Length = 1233

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/429 (20%), Positives = 167/429 (38%), Gaps = 56/429 (13%)

Query: 37   ELEKFLVEAGLYESKEEDEKREQVLGRIRQI--AKDWVKELTRLRGYSDQMVEDANALIF 94
            +L++ L+  G   +  E   R Q +  +  +    D  K   + RG+          ++ 
Sbjct: 607  DLKRALLACGYVPTTSEQGTRRQAITILENVLLGIDQAKPEKQGRGH-------VGLILV 659

Query: 95   TFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEE--VTELQPVLDAHVP 152
              GSY LGV      +D LC+G       + FF +    L +  +  +  L+    +   
Sbjct: 660  PVGSYGLGVWTSSDHVDCLCIG---TMSSKTFFRMALQRLRKASDGGMRILRKASTSTGT 716

Query: 153  VMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP--TVRSLNGCRVADQILKL 210
            ++K +  G+   L Y + + +V +    ++  S   +   P  T+  L   R    +L+ 
Sbjct: 717  MLKLQILGIKFTLHYCAATSIVEKYPRVMNLPSDHPEFALPVQTLAKLKPARDLYYLLRS 776

Query: 211  VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVS--- 267
            +P++  F      +K WA  RG+Y    G L G++  +L+  +C+    A  SM VS   
Sbjct: 777  IPDLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPICKQL--AAISMAVSTTD 834

Query: 268  ---RFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNS 322
                FF  Y    W   V+L      EL          R  +T   P     +  P +N+
Sbjct: 835  ILTTFFSHYADLEWETHVVLDPFYHREL----------RYHRTSREPFCLLGWHAPALNT 884

Query: 323  SYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL--------FFESYRNYLQV 374
            +   ST T++ +  +    N++  +     A W  +  P          F +++++Y+++
Sbjct: 885  AMAASTPTVKSIAAELSKANSLLSQ---PGATWGTILGPASTAASGVRDFLQNFKSYVKI 941

Query: 375  D--IVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVD------TSKPC 426
            D      +      +  W+ESR   +   + R     L    +P  ++D       +   
Sbjct: 942  DARFWGPSPSSGRKFLSWLESRCVAVLADMTRKA-PSLLPRLWPGRFIDRPNTDTVTGSE 1000

Query: 427  AHCAFFMGL 435
             HC + +GL
Sbjct: 1001 YHCFYLIGL 1009


>gi|413933520|gb|AFW68071.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
          Length = 546

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
           L KFL + G+  S E++ KRE+V+  +++I   W   +   +     +   A A + T+ 
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL---ATATVLTYD 268

Query: 98  SYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           SY LG HGP ++ID LC+GP   + +  FF +L
Sbjct: 269 SYTLGAHGPESNIDLLCLGPCIATLQYHFFVVL 301


>gi|413933521|gb|AFW68072.1| hypothetical protein ZEAMMB73_464170 [Zea mays]
          Length = 763

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)

Query: 38  LEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFG 97
           L KFL + G+  S E++ KRE+V+  +++I   W   +   +     +   A A + T+ 
Sbjct: 212 LSKFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAVAYEQSVPQGL---ATATVLTYD 268

Query: 98  SYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           SY LG HGP ++ID LC+GP   + +  FF +L
Sbjct: 269 SYTLGAHGPESNIDLLCLGPCIATLQYHFFVVL 301


>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
          Length = 384

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)

Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
           V +++F+ G  I +E+ L+KA+WS  FE   FF+  ++Y+ +   A      L W G VE
Sbjct: 2   VAVEEFKQGLAITDEILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGLVE 61

Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIR 452
           S++R L   +E++ +  L  H  P E+           + +GL  K  E   E    D+ 
Sbjct: 62  SKIRILVGSLEKNEFITL-AHVNP-EF--------RTIWVIGLVFKKTE-NSENLNVDLT 110

Query: 453 GSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPEGYKRTRH 498
             ++ F     + +IN  MF +  M+    H++RKQ    +P YV     KR +H
Sbjct: 111 YDIQSFMDTVYRQAINSKMF-ELDMKTAAMHVKRKQLHQLLPSYVL---QKRKKH 161


>gi|351701159|gb|EHB04078.1| Poly(A) polymerase alpha [Heterocephalus glaber]
          Length = 298

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 51/81 (62%)

Query: 24  MAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSD 83
           ++ P E +    ++L + L   G++E +EE ++R  +LG++  + K+W++E++  +    
Sbjct: 73  LSTPKETNWVLTQKLNETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQ 132

Query: 84  QMVEDANALIFTFGSYRLGVH 104
            ++E+    +FTFGSYRLGVH
Sbjct: 133 SVIENVGGKMFTFGSYRLGVH 153


>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
          Length = 498

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)

Query: 218 CTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP-----------NAVPSMLV 266
            T  R +K WA+ RG+Y+   G+LGG+  A+L+ARV +L             +AVP +L 
Sbjct: 51  ATAYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILA 110

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAY--PCMNSSY 324
           + FFR Y  + W   +   A D    G       K    +T   P++   Y  P +N+S 
Sbjct: 111 T-FFRDYAGFDWATQM---AFDPFFHG------HKAPHVRTAGEPLVILGYHRPQLNTSM 160

Query: 325 NVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE-------------------PYLFF 365
           + S S++RV+  + +  + +       +  W A                         F 
Sbjct: 161 SASVSSVRVLAAELRRADRLLSA---GRISWDAFLGGGGDEGDSSTIVAGRLLSGAATFV 217

Query: 366 ESYRNYLQVDI--VAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV 420
            +YR Y+++D+     +     ++ GW+ESR   L + + R    +L  H +P  +V
Sbjct: 218 CAYRTYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVAR-RLPQLNTHIWPGRFV 273


>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
          Length = 349

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 21/180 (11%)

Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
           VM+++ + G  I +E+ L+KA+WS LFE   FF+ Y++Y+ +   A      L     VE
Sbjct: 2   VMVEELKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDLVE 61

Query: 393 SRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQ 447
           S++  L   +E++ + KL     Q  P P +  D  K      + +GL  K  E   E  
Sbjct: 62  SKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPD--KEEFRTMWVIGLVFKKTE-NSENL 118

Query: 448 QFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ----IPPYVFPEGYKRTRH 498
             D+   ++ F       +IN  MF +  M+I   H++RKQ    +P ++     KR +H
Sbjct: 119 SVDLTYDIQSFTDTVYSQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHML---QKRKKH 174


>gi|328847777|gb|EGF97110.1| hypothetical protein MELLADRAFT_87937 [Melampsora larici-populina
           98AG31]
          Length = 105

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 7   MSSPPP---PKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGR 63
           MS PP    PK YGVT PIS+ GPT  +      L   L     +ES E+   RE VLGR
Sbjct: 2   MSLPPNGLLPKTYGVTGPISINGPTCPEGFSTTVLMDELKARCTFESPEDARAREFVLGR 61

Query: 64  IRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYR 100
           +  + K++V +++   G SD +  +    IFTFG ++
Sbjct: 62  LNLLVKEFVIKVSPALGMSDHVARETGGNIFTFGQFK 98


>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
 gi|219888671|gb|ACL54710.1| unknown [Zea mays]
          Length = 214

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 5/84 (5%)

Query: 464 MYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLK 521
           MY  WKPGM++ V+H+ R+Q+P YVF +GYK+      A+QQ  S+    +     S LK
Sbjct: 1   MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHANQQEQSDGDGTFSPYLESQLK 60

Query: 522 RKKDPES---VDQDGPEKRQSISP 542
           RK   +    VD     KR S+SP
Sbjct: 61  RKYISDGDGHVDLCKSVKRASVSP 84


>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
 gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
          Length = 103

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 5/65 (7%)

Query: 251 ARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI--DEAELGFSVWDPRKNRR--DK 306
           ARV  L P  +PSML+ RFFRV+  W+WP+PVMLCAI  D+ ELG      R +R    +
Sbjct: 28  ARVPVL-PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLKRHPARHHRAACRR 86

Query: 307 THHMP 311
             H+P
Sbjct: 87  QRHLP 91


>gi|55296010|dbj|BAD68901.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|55296026|dbj|BAD69437.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 207

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 2/61 (3%)

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQ 144
           M + A AL+ +FGSY LGVH  G+DID L VGPSYV R  DFF  L   LAE   V ELQ
Sbjct: 1   MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFGALAAALAETAAVAELQ 58

Query: 145 P 145
           P
Sbjct: 59  P 59


>gi|125526971|gb|EAY75085.1| hypothetical protein OsI_02979 [Oryza sativa Indica Group]
          Length = 127

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 2/61 (3%)

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQ 144
           M + A AL+ +FGSY LGVH  G+DID L VGPSYV R  DFF  L   LAE   V ELQ
Sbjct: 1   MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFGALAATLAETAAVAELQ 58

Query: 145 P 145
           P
Sbjct: 59  P 59


>gi|125571299|gb|EAZ12814.1| hypothetical protein OsJ_02733 [Oryza sativa Japonica Group]
          Length = 127

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 2/61 (3%)

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQ 144
           M + A AL+ +FGSY LGVH  G+DID L VGPSYV R  DFF  L   LAE   V ELQ
Sbjct: 1   MADQATALVLSFGSYHLGVHSRGSDIDVLVVGPSYVDR--DFFGALAAALAETAAVAELQ 58

Query: 145 P 145
           P
Sbjct: 59  P 59


>gi|341888961|gb|EGT44896.1| hypothetical protein CAEBREN_24044 [Caenorhabditis brenneri]
          Length = 224

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 27/154 (17%)

Query: 32  MQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANA 91
           MQ  +E + F       E  E+ EKR  V+ ++  I   W+K +   R      V+    
Sbjct: 1   MQTLKEFKSF-------EPIEDTEKRVTVIKKLTDIGNTWIKMIIASRVSKGSNVKTEGK 53

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHV 151
            +  FG Y LGVH  G DID++ + PS                    ++ +L    +A V
Sbjct: 54  CV-AFGFYWLGVHSSGGDIDSVLIAPS-------------------SKIKKLNAAGNAFV 93

Query: 152 PVMKFKFDGLSIDLLYASISRLVVREDLDISDMS 185
            +M  + DG+ +DLL A +    +  +LD++  S
Sbjct: 94  LLMTMECDGVEVDLLIACMDLATIPANLDLTSDS 127


>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
          Length = 274

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 26/189 (13%)

Query: 224 LKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY----PNAVPSMLVSRFFRVYTMWRWP 279
           LK WAK RG+YS+  G LG +N ++++  +C+L     P+A  + +++ FF  Y  + W 
Sbjct: 11  LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70

Query: 280 NPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQ 339
             ++L  +    +        K  R +   M ++    P  N++ N + ST+ ++  +  
Sbjct: 71  TNMVLDPLFHGTV--------KYHRTQRESMCLLGWHTPSRNTALNATASTIHILSAEIM 122

Query: 340 YGNTICEEVELN-----KAQWSALFEPYL-------FFESYRNYLQVD--IVAANADDLL 385
             + +  +  +N     +   S L  P L       F +S++ Y++++   +  +     
Sbjct: 123 RASDLLSQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNASYLGCSPRKGK 182

Query: 386 AWKGWVESR 394
            + GW+ESR
Sbjct: 183 RFVGWLESR 191


>gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 1007

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 26/193 (13%)

Query: 91  ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
           A I   GS R   H P ADID +   P       D   +   +   +     ++ ++ A 
Sbjct: 681 ATIHLVGSRRTATHLPAADIDLVAAVPG----APDIGALERRVAKALGAGHRVRQLVAAR 736

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISD-MSVLNDVDEPTVRSLNGCRVADQILK 209
           VP ++     LS DL+ A         D+  +D ++   ++ E    SL+    A+ ++ 
Sbjct: 737 VPGLRIVTPRLSADLVLAPTG------DIPPADAVARRAELGETIASSLSAVSDAEALIA 790

Query: 210 LVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRF 269
           L P        +R  K WA+ RG+ +   G L G+ WAL+ AR   L          + F
Sbjct: 791 LRPGPH-----VRVAKAWARARGLDAAPLGGLPGLAWALMAARCRDL----------TDF 835

Query: 270 FRVYTMWRWPNPV 282
           F  +    W +P+
Sbjct: 836 FETWAAHSWQDPI 848


>gi|410730487|ref|XP_003671423.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
 gi|401780241|emb|CCD26180.2| hypothetical protein NDAI_0G04030 [Naumovozyma dairenensis CBS 421]
          Length = 582

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 65/240 (27%)

Query: 50  SKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGAD 109
           SKEE ++R   +GRIR                 +    DAN  +  FGSY   ++ PG+D
Sbjct: 183 SKEEIKERNDTIGRIRDAV--------------NHFWNDAN--LHVFGSYATDLYLPGSD 226

Query: 110 IDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKF--KFDGLSIDLLY 167
           ID + +            + L N L +    T+++ +  A VP++KF      + ID+ +
Sbjct: 227 IDCVIISEKGDKDSRSSLYALANFLKKRGLATDIEVIAKARVPIIKFIDPRSKIHIDVSF 286

Query: 168 ASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRC 223
             I+ L    ++RE L+          D P +R +                     TL  
Sbjct: 287 ERINGLEAAKLIREWLN----------DTPGLREI---------------------TLIV 315

Query: 224 LKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---------MLVSRFFRVY 273
            +F   RR   +NV TG LGG +   LV    Q++P  + +         +L+  FF +Y
Sbjct: 316 KQFLHARR--LNNVHTGGLGGFSIICLVFSFLQMHPRIISNEIDPMENLGVLLVEFFELY 373


>gi|50286703|ref|XP_445781.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525087|emb|CAG58700.1| unnamed protein product [Candida glabrata]
          Length = 485

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 61/252 (24%)

Query: 35  NRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIF 94
           N E+  F+  A +  SKEE E R + +G IR      VKEL              +A + 
Sbjct: 104 NYEILDFV--AYISPSKEEIETRNRTIGSIRSA----VKELW------------PDADLH 145

Query: 95  TFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVM 154
            FGSY   ++ PG+DID +        +  +  + L N L + E  TE++ V  A VP++
Sbjct: 146 VFGSYATDLYLPGSDIDCVVNSKQGDKQSRNNLYKLANFLKKKEIATEIEVVAKARVPII 205

Query: 155 KFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQI---LKLV 211
           KF                +  R  +DIS               LNG   A  I   L   
Sbjct: 206 KF--------------VEVESRTHMDIS------------FERLNGLEAAKLIRDWLAST 239

Query: 212 PNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS------- 263
           P +      ++  +F   RR   +NV +G LGG +   LV    +++P  + +       
Sbjct: 240 PGLRELVLVVK--QFLHSRR--LNNVHSGGLGGFSIICLVYSFLRMHPRIITAEIDPLEN 295

Query: 264 --MLVSRFFRVY 273
             +L+  FF +Y
Sbjct: 296 LGVLLIEFFELY 307


>gi|444314869|ref|XP_004178092.1| hypothetical protein TBLA_0A07840 [Tetrapisispora blattae CBS 6284]
 gi|387511131|emb|CCH58573.1| hypothetical protein TBLA_0A07840 [Tetrapisispora blattae CBS 6284]
          Length = 711

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 123/321 (38%), Gaps = 69/321 (21%)

Query: 29  EADMQRNRELEKFLVE------AGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYS 82
           + D  +  E+   L E      A +  S+EE E R Q +G+IR+  K   K         
Sbjct: 192 QHDHSKQNEVSDLLTEEIKDFVAYISPSREEIELRNQTIGKIRKAVKKLWK--------- 242

Query: 83  DQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTE 142
                  N+ ++ FGSY   ++ PG+DID + +  +         + L + L + +  T+
Sbjct: 243 -------NSDLYVFGSYATDLYLPGSDIDCVIISSAGDKENRHSLYQLSSWLKQNKLATK 295

Query: 143 LQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCR 202
           ++ +  A VP++KF     +I +                       DV       L   +
Sbjct: 296 VEVIAKARVPIIKFVEPSSNIHI-----------------------DVSFERSNGLEAAK 332

Query: 203 VADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVP 262
                L   P +      ++  +F   RR    ++ G LGG++   +V     L+P  + 
Sbjct: 333 TIRDWLNSTPGLRELVLIIK--QFLNSRRLNDVHLGG-LGGLSIICMVYSFLSLHPRILT 389

Query: 263 S---------MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD-----KTH 308
           +         +L+  FF +Y      + V L   D    G + + P+K  RD      T+
Sbjct: 390 NDIDPLDNLGVLLLDFFELYGKNFAYDDVALSFQD----GRAAYMPKKQWRDILPVRTTY 445

Query: 309 HMPIITPAYPCMN---SSYNV 326
            + I  P  P  N   SSYN+
Sbjct: 446 ALAIQDPNDPTNNISRSSYNL 466


>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
          Length = 285

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 27/32 (84%)

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           TVRSLNG RVAD+IL+LVP+   F TTLRC+K
Sbjct: 32  TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63


>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
          Length = 347

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 27/32 (84%)

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           TVRSLNG RVAD+IL+LVP+   F TTLRC+K
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189


>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
 gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
          Length = 319

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 27/32 (84%)

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           TVR+LNG RVAD+IL+LVP+   F TTLRC+K
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166


>gi|6324457|ref|NP_014526.1| non-canonical poly(A) polymerase PAP2 [Saccharomyces cerevisiae
           S288c]
 gi|1717744|sp|P53632.1|PAP2_YEAST RecName: Full=Poly(A) RNA polymerase protein 2; AltName: Full=DNA
           polymerase kappa; AltName: Full=DNA polymerase sigma;
           AltName: Full=Topoisomerase 1-related protein TRF4
 gi|663237|emb|CAA88145.1| ORF [Saccharomyces cerevisiae]
 gi|950226|gb|AAC49091.1| Trf4p [Saccharomyces cerevisiae]
 gi|1419987|emb|CAA99134.1| TRF4 [Saccharomyces cerevisiae]
 gi|51830518|gb|AAU09782.1| YOL115W [Saccharomyces cerevisiae]
 gi|285814775|tpg|DAA10668.1| TPA: non-canonical poly(A) polymerase PAP2 [Saccharomyces
           cerevisiae S288c]
 gi|392296670|gb|EIW07772.1| Pap2p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 584

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 75/282 (26%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E++ F+  A +  S+EE E R Q +  IR+  K              Q+  DA+  +  F
Sbjct: 182 EIKDFV--AYISPSREEIEIRNQTISTIREAVK--------------QLWPDAD--LHVF 223

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAHVPVM 154
           GSY   ++ PG+DID  CV  S +  +E  +  + L + L +    TE++ V  A VP++
Sbjct: 224 GSYSTDLYLPGSDID--CVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPII 281

Query: 155 KF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           KF     G+ ID+ +   + +    ++RE LD          D P +R L          
Sbjct: 282 KFVEPHSGIHIDVSFERTNGIEAAKLIREWLD----------DTPGLREL---------- 321

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---- 263
                       L   +F   RR   +NV TG LGG +   LV     ++P  + +    
Sbjct: 322 -----------VLIVKQFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368

Query: 264 -----MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                +L+  FF +Y      + V L + D    G+ V+ P+
Sbjct: 369 KDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 406


>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
          Length = 373

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 341 GNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTL 400
           G T+  +  L+K  WS LFEP  FF  YR+Y+ V +  +     L   G VESRLR L  
Sbjct: 32  GLTVSSDALLHKQPWSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVS 90

Query: 401 MIERDTYGKL---QCHPY 415
             E + Y K+    C  Y
Sbjct: 91  NFELNRYVKIAHVNCRSY 108


>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 266

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query: 190 VDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           +D  T RSLNG RVAD+IL+LVP+ + F TTLRC+K
Sbjct: 58  LDLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93


>gi|349581056|dbj|GAA26214.1| K7_Pap2p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 584

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 75/282 (26%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E++ F+  A +  S+EE E R Q +  IR+  K              Q+  DA+  +  F
Sbjct: 182 EIKDFV--AYISPSREEIEIRNQTISTIREAVK--------------QLWPDAD--LHVF 223

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAHVPVM 154
           GSY   ++ PG+DID  CV  S +  +E  +  + L + L +    TE++ V  A VP++
Sbjct: 224 GSYSTDLYLPGSDID--CVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPII 281

Query: 155 KF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           KF     G+ ID+ +   + +    ++RE LD          D P +R L          
Sbjct: 282 KFVEPHSGIHIDVSFERTNGIEAAKLIREWLD----------DTPGLREL---------- 321

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---- 263
                       L   +F   RR   +NV TG LGG +   LV     ++P  + +    
Sbjct: 322 -----------VLIVKQFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368

Query: 264 -----MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                +L+  FF +Y      + V L + D    G+ V+ P+
Sbjct: 369 KDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 406


>gi|255710469|ref|XP_002551518.1| KLTH0A01276p [Lachancea thermotolerans]
 gi|238932895|emb|CAR21076.1| KLTH0A01276p [Lachancea thermotolerans CBS 6340]
          Length = 609

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 61/280 (21%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKD-WVKELTRLRGYSDQMVEDANALIFT 95
           E++ F+  A +  S+EE   R   + +IR   KD W                  +A +  
Sbjct: 172 EIKDFV--AYISPSQEEIRVRNSTISKIRNAVKDLW-----------------PDADLHV 212

Query: 96  FGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMK 155
           FGS+   ++ PG+DID +    S      +  + L + L   +  T+++ +  A VP++K
Sbjct: 213 FGSFATDLYLPGSDIDCVINSSSGDKENRNCLYSLASFLKRRKLATQVEVISKARVPIIK 272

Query: 156 FKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVE 215
           F             IS++ +             D+    V  L   RV    LK  P + 
Sbjct: 273 F----------VEPISQIHI-------------DISFERVNGLEAARVIRGWLKETPGLR 309

Query: 216 HFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS---------MLV 266
                ++  +F A RR +    TG LGG +   LV    QL+P  + S         +L+
Sbjct: 310 ELVLIVK--QFLAARR-LNMVHTGGLGGFSIICLVYAFLQLHPRVISSDIDSMENLGILL 366

Query: 267 SRFFRVYTMWRWPNPVMLCAIDEA------ELGFSVWDPR 300
             FF +Y      + V +   D        EL  S+ +PR
Sbjct: 367 IDFFELYGKNFGYDHVAISVTDSGARYLSKELYGSLQNPR 406


>gi|256271045|gb|EEU06149.1| Pap2p [Saccharomyces cerevisiae JAY291]
          Length = 584

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 120/282 (42%), Gaps = 75/282 (26%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E++ F+  A +  S+EE E R + +  IR+  K              Q+  DA+  +  F
Sbjct: 182 EIKDFV--AYISPSREEIEIRNKTISTIREAVK--------------QLWPDAD--LHVF 223

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAHVPVM 154
           GSY   ++ PG+DID  CV  S +  +E  +  + L + L + +  TE++ V  A VP++
Sbjct: 224 GSYSTDLYLPGSDID--CVVTSKLGGKESRNNLYSLASHLKKKKLATEVEVVAKARVPII 281

Query: 155 KF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           KF     G+ ID+ +   + +    ++RE LD          D P +R L          
Sbjct: 282 KFVEPHSGIHIDVSFERTNGIEAAKLIREWLD----------DTPGLREL---------- 321

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---- 263
                       L   +F   RR   +NV TG LGG +   LV     ++P  + +    
Sbjct: 322 -----------VLIVKQFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368

Query: 264 -----MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                +L+  FF +Y      + V L + D    G+ V+ P+
Sbjct: 369 KDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 406


>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
          Length = 565

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)

Query: 92  LIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL--AEMEEVTELQPVLDA 149
           ++   GSY LGV    +DID  C+GP         F +  + L  A  + V  L+ V   
Sbjct: 405 VVVPVGSYALGVWTTSSDIDVCCIGPF---SSNTLFSVASSSLRKAATQGVRNLRRVKAN 461

Query: 150 HVPVMKFKFDGLSIDLLYASISRLVVR--EDLDISDMSVLNDVDEPTVRSLNGCRVADQI 207
              +++ +  G+ +DL Y   + +  +    L +     +  +   T+  L   R  D +
Sbjct: 462 TGTMLELEVQGVRMDLQYCPAASVAQQWPNVLRLPAKDPVWSLAPQTLNKLKAIRDIDYL 521

Query: 208 LKLVPNVEHFCTTLRCLKFWAKRRGVYS 235
            + +P++E F    R +K WA+ RGVYS
Sbjct: 522 RRSLPDIESFRLAHRFIKTWARSRGVYS 549


>gi|401623740|gb|EJS41828.1| trf4p [Saccharomyces arboricola H-6]
          Length = 573

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 75/282 (26%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E++ F+  A +  S+EE E R Q +  IR+  K              Q+  DA+  +  F
Sbjct: 174 EIKDFV--AYISPSREEIEVRNQTISMIREAVK--------------QLWPDAD--LHVF 215

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAHVPVM 154
           GSY   ++ PG+DID  CV  S +  +E  +  F L + L +    TE++ V  A VP++
Sbjct: 216 GSYSTDLYLPGSDID--CVITSELGGKESRNNLFSLASHLKKKNLATEIEVVAKARVPII 273

Query: 155 KF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           KF     G+ ID+ +   + L    ++RE L+          D P +R L          
Sbjct: 274 KFVEPNSGIHIDVSFERTNGLEAAKLIREWLN----------DTPGLREL---------- 313

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---- 263
                       L   +F   RR   +NV TG LGG +   LV     ++P  +      
Sbjct: 314 -----------VLIVKQFLHSRR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITKEIEA 360

Query: 264 -----MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                +L+  FF +Y      + V L + D    G+ V+ P+
Sbjct: 361 KDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 398


>gi|190407236|gb|EDV10503.1| DNA polymerase sigma [Saccharomyces cerevisiae RM11-1a]
 gi|259149371|emb|CAY86175.1| Pap2p [Saccharomyces cerevisiae EC1118]
          Length = 584

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 75/282 (26%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E++ F+  A +  S+EE E R + +  IR+  K              Q+  DA+  +  F
Sbjct: 182 EIKDFV--AYISPSREEIEIRNKTISTIREAVK--------------QLWPDAD--LHVF 223

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAHVPVM 154
           GSY   ++ PG+DID  CV  S +  +E  +  + L + L +    TE++ V  A VP++
Sbjct: 224 GSYSTDLYLPGSDID--CVVTSKLGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPII 281

Query: 155 KF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           KF     G+ ID+ +   + +    ++RE LD          D P +R L          
Sbjct: 282 KFVEPHSGIHIDVSFERTNGIEAAKLIREWLD----------DTPGLREL---------- 321

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---- 263
                       L   +F   RR   +NV TG LGG +   LV     ++P  + +    
Sbjct: 322 -----------VLIVKQFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368

Query: 264 -----MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                +L+  FF +Y      + V L + D    G+ V+ P+
Sbjct: 369 KDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 406


>gi|151945519|gb|EDN63760.1| DNA polymerase sigma [Saccharomyces cerevisiae YJM789]
          Length = 584

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 75/282 (26%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E++ F+  A +  S+EE E R + +  IR+  K              Q+  DA+  +  F
Sbjct: 182 EIKDFV--AYISPSREEIEIRNKTISTIREAVK--------------QLWPDAD--LHVF 223

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAHVPVM 154
           GSY   ++ PG+DID  CV  S +  +E  +  + L + L +    TE++ V  A VP++
Sbjct: 224 GSYSTDLYLPGSDID--CVVTSKLGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPII 281

Query: 155 KF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           KF     G+ ID+ +   + +    ++RE LD          D P +R L          
Sbjct: 282 KFVEPHSGIHIDVSFERTNGIEAAKLIREWLD----------DTPGLREL---------- 321

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---- 263
                       L   +F   RR   +NV TG LGG +   LV     ++P  + +    
Sbjct: 322 -----------VLIVKQFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 368

Query: 264 -----MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                +L+  FF +Y      + V L + D    G+ V+ P+
Sbjct: 369 KDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 406


>gi|355709244|gb|AES03527.1| poly polymerase gamma [Mustela putorius furo]
          Length = 92

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 1  MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV 60
          MS++  + S    K YG+T PIS+A P E D    ++L   +   G++E +EE   R  V
Sbjct: 18 MSANTMLDSQRQQKHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVV 77

Query: 61 LGRIRQIAKDWVKEL 75
          LG++  + K+W+ ++
Sbjct: 78 LGKLNNLVKEWISDV 92


>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
          Length = 248

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 26/32 (81%)

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           TVRSLNG RVAD+IL LVP+   F TTLRC+K
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142


>gi|402577076|gb|EJW71033.1| hypothetical protein WUBG_18059 [Wuchereria bancrofti]
          Length = 94

 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 42/63 (66%)

Query: 17 GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
          GV++PIS++GP E D+  + +L+++L   G +E++EE   R +VL +I    K WV+ ++
Sbjct: 29 GVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRIVS 88

Query: 77 RLR 79
          + R
Sbjct: 89 KRR 91


>gi|358394414|gb|EHK43807.1| hypothetical protein TRIATDRAFT_163212, partial [Trichoderma
           atroviride IMI 206040]
          Length = 690

 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 39/189 (20%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVS-------REEDFFFILHNILA--EMEE 139
           ANA +F FGS+  G++ P AD+D +   PS++          + + +    +L    + E
Sbjct: 404 ANAELFPFGSFMSGLYLPTADMDLVVCSPSFMRGGPPTFMSAKSWLYKFRKLLVAQRIAE 463

Query: 140 VTELQPVLDAHVPVMKF--KFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRS 197
              ++ +  A +P++KF  +  GL +D+ +                             +
Sbjct: 464 QDSIEVIAHARIPLVKFIDRATGLRVDVSF----------------------------EN 495

Query: 198 LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 257
           L G +  D  L+           +  +K +   RG+   V G LGG +   LV  + QL 
Sbjct: 496 LGGVKAIDTFLRWKKEFPAMPILVTVIKHFLLMRGLNEPVNGGLGGFSVICLVVSMLQLM 555

Query: 258 PNAVPSMLV 266
           P      L+
Sbjct: 556 PQVQSRSLI 564


>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
 gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
          Length = 169

 Score = 48.9 bits (115), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/32 (71%), Positives = 27/32 (84%)

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           TVRSLNG RVAD+IL+LVP+   F TTLRC+K
Sbjct: 42  TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73


>gi|366997671|ref|XP_003683572.1| hypothetical protein TPHA_0A00530 [Tetrapisispora phaffii CBS 4417]
 gi|357521867|emb|CCE61138.1| hypothetical protein TPHA_0A00530 [Tetrapisispora phaffii CBS 4417]
          Length = 678

 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 69/242 (28%)

Query: 50  SKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGAD 109
           S+EE + R +++  I+Q  +D              +  DA+ L+F  GSY   ++ PG+D
Sbjct: 190 SREEIKLRNRIIAAIKQAVRD--------------LWSDADLLVF--GSYATDLYLPGSD 233

Query: 110 IDALCVGPSYVSREEDFF--FILHNILAEMEEVTELQPVLDAHVPVMKF--KFDGLSIDL 165
           ID  CV  S    +E  +  +IL + L ++   T+++ +  A VP++KF      + ID+
Sbjct: 234 ID--CVINSEKGDKESRYNLYILASHLRQLNLATQVEVIAKARVPIIKFVEPKSQIHIDV 291

Query: 166 LYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTL 221
            +   + +    ++RE LD          D P +R L                      L
Sbjct: 292 SFERTNGVEAAKLIREWLD----------DTPGLREL---------------------VL 320

Query: 222 RCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYP----NAVPSM-----LVSRFFR 271
              +F A RR   +NV TG LGG +   LV    +++P    NA+  +     L+  FF 
Sbjct: 321 VIKQFLATRR--LNNVHTGGLGGFSIICLVFCFLKMHPKIITNAINELDNLGVLLIEFFE 378

Query: 272 VY 273
           +Y
Sbjct: 379 LY 380


>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 157

 Score = 48.5 bits (114), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 351 NKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL 410
           N+  W+ L  P+ FF+ YR +L ++I A      L +KG VESR+R L   +E     K+
Sbjct: 16  NEVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKV 75

Query: 411 QCHPYP 416
              P+P
Sbjct: 76  LPQPHP 81


>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
          Length = 608

 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
           TVRSLNG  VAD+IL+LVP+     TTLRC+K
Sbjct: 151 TVRSLNGVHVADEILRLVPDAAALHTTLRCVK 182


>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
          Length = 153

 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 34/48 (70%)

Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDI 181
           L + EEV +L+ V +A VPV+K  FDG+ ID+L+A ++   + EDLD+
Sbjct: 6   LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDL 53


>gi|290988093|ref|XP_002676756.1| predicted protein [Naegleria gruberi]
 gi|284090360|gb|EFC44012.1| predicted protein [Naegleria gruberi]
          Length = 604

 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 44/209 (21%)

Query: 49  ESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGA 108
           ++KEE+  RE+VL ++ ++ K+                 D N  I  FGSY  G+  PG+
Sbjct: 265 QTKEEELVRERVLEKVMRLCKNV----------------DPNCRIQMFGSYPAGLMLPGS 308

Query: 109 DIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYA 168
           D+D   +  S    ++ F   L+  L +  E  E+  + +A+VP++KFK + +S+     
Sbjct: 309 DLDLHVLSRSL--SQKVFLEKLNRELNKSTEFVEINFIRNANVPIIKFK-EAISL----- 360

Query: 169 SISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWA 228
                   +++D+S     N+ D  T  S+   R + +     P  ++ C     LK++ 
Sbjct: 361 --------QEVDVS----CNNAD--TDSSVEFIRRSSE---KYPAFKYLCY---FLKYFL 400

Query: 229 KRRGVYSNVTGFLGGVNWALLVARVCQLY 257
           K+R +   + G L     +L++    Q++
Sbjct: 401 KQRNLNMVLYGGLSSYGLSLMIVSHLQMH 429


>gi|401837753|gb|EJT41641.1| PAP2-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 592

 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 115/288 (39%), Gaps = 67/288 (23%)

Query: 31  DMQRNRELEKFLV------EAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQ 84
           D  R +E+  +L        A +  S+EE E R Q +  IR+  K              Q
Sbjct: 170 DHSRQKEISDWLTFEIKDFVAYISPSREEIEIRNQTISTIREALK--------------Q 215

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTE 142
           +  DA+  +  FGSY   ++ PG+DID  CV  S +  +E  +  + L + L +    TE
Sbjct: 216 LWPDAD--LHVFGSYSTDLYLPGSDID--CVVNSELGGKESRNNLYSLASHLKKNNLATE 271

Query: 143 LQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCR 202
           ++ V  A VP++KF              SR+ +             DV       L   +
Sbjct: 272 IEVVAKARVPIIKF----------VEPHSRIHI-------------DVSFERTNGLEAAK 308

Query: 203 VADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAV 261
           +  + L   P +      ++  +F   RR   +NV TG LGG +   LV     ++P  +
Sbjct: 309 LIREWLNDTPGLRELVLIVK--QFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRII 364

Query: 262 PS---------MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                      +L+  FF +Y      + V L + D    G+ ++ P+
Sbjct: 365 TKEIDSKDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPIYFPK 408


>gi|366992111|ref|XP_003675821.1| hypothetical protein NCAS_0C04670 [Naumovozyma castellii CBS 4309]
 gi|342301686|emb|CCC69457.1| hypothetical protein NCAS_0C04670 [Naumovozyma castellii CBS 4309]
          Length = 586

 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 92/234 (39%), Gaps = 53/234 (22%)

Query: 50  SKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGAD 109
           S+EE E R Q + ++R   K              Q+  DA+  +  FGSY   ++ PG+D
Sbjct: 191 SREEIESRNQTISKVRNAVK--------------QLWPDAD--LHVFGSYATDLYLPGSD 234

Query: 110 IDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYAS 169
           ID +    +      +  + L + L +    T+++ +    VP++KF     +I +    
Sbjct: 235 IDCVINSKAGDKENRNSLYSLASFLKQQGLATQIEVIAKTRVPIIKFVEPESNIHI---- 290

Query: 170 ISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAK 229
                              DV       L   ++  + L+  P +      ++  +F   
Sbjct: 291 -------------------DVSFERTNGLEAAKLIREWLQDTPGLRELVLIIK--QFLHS 329

Query: 230 RRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---------MLVSRFFRVY 273
           RR   +NV TG LGG +   +V    Q++P  + +         +L+  FF +Y
Sbjct: 330 RR--LNNVHTGGLGGFSIICIVFSFLQMHPRIITNEIDPMENLGVLLIEFFELY 381


>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
          Length = 134

 Score = 47.0 bits (110), Expect = 0.039,   Method: Composition-based stats.
 Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 2/34 (5%)

Query: 216 HFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALL 249
           HF TTL CLKFWAK RG+YSNV  FL  + W  L
Sbjct: 103 HFLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134


>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
          Length = 927

 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%)

Query: 178 DLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNV 214
           DLDI+  S   + +E TV SLNGCRV DQ L LVPN+
Sbjct: 679 DLDIAQGSDTTECNEQTVDSLNGCRVTDQFLHLVPNI 715


>gi|345563688|gb|EGX46674.1| hypothetical protein AOL_s00097g578 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1706

 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 44/196 (22%)

Query: 77   RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVG--------PSYVSREE--DF 126
            RLR       +DA+  I  FGS+   ++ P +D+D + +         P Y S  E    
Sbjct: 1300 RLRELIQSRFDDAD--IQAFGSFAAEIYLPTSDMDIVLLSRQYLETSRPKYDSVNEIRKL 1357

Query: 127  FFILHNILAEMEEVTELQPVLDAHVPVMKFK--FDGLSIDLLYASISRLVVREDLDISDM 184
              IL N  +++ +   L P+L A VP++K+K    GLS+D+ + + S L+          
Sbjct: 1358 ARILRN--SDLPQSGTLVPILSAKVPIIKYKDRLTGLSVDISFENPSGLIA--------- 1406

Query: 185  SVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGV 244
                      +R+ N  R   Q+   +P +         LK +   RG+     G LG  
Sbjct: 1407 ----------IRTFNQWR---QVFPEMPKLALL------LKQFLAIRGINEPFNGGLGSF 1447

Query: 245  NWALLVARVCQLYPNA 260
            +   ++  + QL P A
Sbjct: 1448 SLICMIVSMLQLMPEA 1463


>gi|365758533|gb|EHN00370.1| Pap2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 514

 Score = 46.2 bits (108), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 115/288 (39%), Gaps = 67/288 (23%)

Query: 31  DMQRNRELEKFLV------EAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQ 84
           D  R +E+  +L        A +  S+EE E R Q +  IR+  K              Q
Sbjct: 170 DHSRQKEISDWLTFEIKDFVAYISPSREEIEIRNQTISTIREALK--------------Q 215

Query: 85  MVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTE 142
           +  DA+  +  FGSY   ++ PG+DID  CV  S +  +E  +  + L + L +    TE
Sbjct: 216 LWPDAD--LHVFGSYSTDLYLPGSDID--CVVNSELGGKESRNNLYSLASHLKKNNLATE 271

Query: 143 LQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCR 202
           ++ V  A VP++KF              SR+ +             DV       L   +
Sbjct: 272 IEVVAKARVPIIKF----------VEPHSRIHI-------------DVSFERTNGLEAAK 308

Query: 203 VADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAV 261
           +  + L   P +      ++  +F   RR   +NV TG LGG +   LV     ++P  +
Sbjct: 309 LIREWLNDTPGLRELVLIVK--QFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRII 364

Query: 262 PS---------MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                      +L+  FF +Y      + V L + D    G+ ++ P+
Sbjct: 365 TKEIDSKDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPIYFPK 408


>gi|367014043|ref|XP_003681521.1| hypothetical protein TDEL_0E00670 [Torulaspora delbrueckii]
 gi|359749182|emb|CCE92310.1| hypothetical protein TDEL_0E00670 [Torulaspora delbrueckii]
          Length = 663

 Score = 46.2 bits (108), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 39/211 (18%)

Query: 73  KELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHN 132
           K ++++R    ++  DA+  +F  GSY   ++ PG+DID +           +  + L +
Sbjct: 230 KTISKIRAAVRELWPDADLQVF--GSYATDLYLPGSDIDCVVNSKGRDKENRNSLYSLAS 287

Query: 133 ILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDE 192
            L   E  T ++ +  A VP++KF      I +                       DV  
Sbjct: 288 FLKSKELATRVEVIAKARVPIIKFVEPQSQIHI-----------------------DVSF 324

Query: 193 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVA 251
             +  L   R+  + L+  P +      ++  +F   RR   +NV TG LGG +   LV 
Sbjct: 325 ERINGLEAARLIREWLEETPGLRELVLIVK--QFLHSRR--LNNVHTGGLGGFSIICLVY 380

Query: 252 RVCQLYPNAVPS---------MLVSRFFRVY 273
               L+P  V           +L+  FF +Y
Sbjct: 381 SFLHLHPRVVSDEIDPLDNLGVLLIDFFELY 411


>gi|134055884|emb|CAK37363.1| unnamed protein product [Aspergillus niger]
          Length = 67

 Score = 46.2 bits (108), Expect = 0.061,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 39/65 (60%)

Query: 9  SPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIA 68
          + PP +Q+GVT PIS   PT  ++  N +L   L     +ES  E E+R+QVL  I+++ 
Sbjct: 2  AAPPVRQWGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRVT 61

Query: 69 KDWVK 73
           ++VK
Sbjct: 62 VEFVK 66


>gi|302148910|pdb|3NYB|A Chain A, Structure And Function Of The Polymerase Core Of Tramp, A
           Rna Surveillance Complex
          Length = 323

 Score = 45.8 bits (107), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 75/282 (26%)

Query: 37  ELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTF 96
           E++ F+  A +  S+EE E R Q +  IR+  K              Q+  DA+  +  F
Sbjct: 24  EIKDFV--AYISPSREEIEIRNQTISTIREAVK--------------QLWPDAD--LHVF 65

Query: 97  GSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAHVPVM 154
           GSY   ++ PG+DID  CV  S +  +E  +  + L + L +    TE++ V  A VP++
Sbjct: 66  GSYSTDLYLPGSDID--CVVTSELGGKESRNNLYSLASHLKKKNLATEVEVVAKARVPII 123

Query: 155 KF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCRVADQIL 208
           KF     G+ I + +   + +    ++RE LD          D P +R L          
Sbjct: 124 KFVEPHSGIHIAVSFERTNGIEAAKLIREWLD----------DTPGLREL---------- 163

Query: 209 KLVPNVEHFCTTLRCLKFWAKRRGVYSNV-TGFLGGVNWALLVARVCQLYPNAVPS---- 263
                       L   +F   RR   +NV TG LGG +   LV     ++P  + +    
Sbjct: 164 -----------VLIVKQFLHARR--LNNVHTGGLGGFSIICLVFSFLHMHPRIITNEIDP 210

Query: 264 -----MLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
                +L+  FF +Y      + V L + D    G+ V+ P+
Sbjct: 211 KDNLGVLLIEFFELYGKNFGYDDVALGSSD----GYPVYFPK 248


>gi|346321528|gb|EGX91127.1| PAP/25A-associated [Cordyceps militaris CM01]
          Length = 703

 Score = 45.8 bits (107), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 50/218 (22%)

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           RIR    D +K+  R  G +      A+A +F FGS+  G++ P AD+D +    S++  
Sbjct: 389 RIRDNLVDNLKKAMRRDGRNF-----ASAHVFPFGSFMSGLYLPTADMDIVVCSASFMRG 443

Query: 123 EEDFFFILHNILAEMEEVTELQPVLD---------AHVPVMKF--KFDGLSIDLLYASIS 171
               +    + L + ++    Q V D         A +P++KF  KF GL +D+ +    
Sbjct: 444 GPPTYLGAKSWLYKFQKFLVTQRVADNDAIQVIAHARIPLVKFVDKFTGLRVDISF---- 499

Query: 172 RLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILK---LVPNVEHFCTTLRCLKFWA 228
                                    +L G    +  +K   L P +    T    +K + 
Sbjct: 500 ------------------------ENLGGVDAVETFVKWKQLYPAMPILVT---VIKHYL 532

Query: 229 KRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLV 266
             RG+   V G +GG +   LV  + QL P      LV
Sbjct: 533 LMRGLNEPVNGGIGGFSVICLVVSMLQLLPQVQSRTLV 570


>gi|340518876|gb|EGR49116.1| hypothetical protein TRIREDRAFT_61322 [Trichoderma reesei QM6a]
          Length = 679

 Score = 45.4 bits (106), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 71/189 (37%), Gaps = 39/189 (20%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           ANA +F FGS+  G++ P AD+D +    S++   +  +    N L +  ++   Q + +
Sbjct: 386 ANAQLFPFGSFVSGLYLPTADMDVVVCSESFMKGGDATYLSAKNWLYKFRKLLTSQRIAN 445

Query: 149 ---------AHVPVMKF--KFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRS 197
                    A +P++K+  K  GL +D+                            +  +
Sbjct: 446 FDSIEVIAHARIPLVKYVDKATGLRVDV----------------------------SFEN 477

Query: 198 LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 257
           L G R  +   +           +  +K +   RG+   V G LGG     LV  + QL 
Sbjct: 478 LGGVRAVETFQRWKKEYPAMPALVTVIKHYLLMRGLNEPVNGGLGGFTVICLVVSMLQLM 537

Query: 258 PNAVPSMLV 266
           P      LV
Sbjct: 538 PEVQSGSLV 546


>gi|389642869|ref|XP_003719067.1| DNA polymerase sigma [Magnaporthe oryzae 70-15]
 gi|351641620|gb|EHA49483.1| DNA polymerase sigma [Magnaporthe oryzae 70-15]
 gi|440474598|gb|ELQ43333.1| DNA polymerase sigma [Magnaporthe oryzae Y34]
 gi|440486580|gb|ELQ66430.1| DNA polymerase sigma [Magnaporthe oryzae P131]
          Length = 703

 Score = 45.4 bits (106), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 59/335 (17%)

Query: 63  RIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSR 122
           ++RQ   D + +L R   + D       A ++ FGS++  ++ P  D+D +    SY+S 
Sbjct: 393 KLRQGLIDELAKLIRNSQFRD-------ATVYPFGSFKSNLYLPTGDMDLVFCSDSYMSG 445

Query: 123 EEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDIS 182
               +   +++      +   Q  +D HV     K     + L+    SR  ++ D+   
Sbjct: 446 RAARYSSKNHVFKFGAFIERKQLAVDNHVE----KISKARVPLVKYVDSRTGLKVDVSFE 501

Query: 183 DMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLG 242
           +++              G R  +  L            + C+K +   RG+     G +G
Sbjct: 502 NIT--------------GIRAIETFLAWREQFPDMPVLVTCIKHFLAMRGLNEPANGGIG 547

Query: 243 GVNWALLVARVCQLYPNA-----VP----SMLVSRFFRVYTMWRWPNPVMLCA-----ID 288
           G     LV  + QL P+       P      L+ RFF +Y      + V +       I 
Sbjct: 548 GTTVICLVVSMLQLSPDVQSRSMTPESHLGQLLLRFFDLYGNRFSYDRVAISMNPPRYIP 607

Query: 289 EAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEE- 347
           ++++   V+         T  + II P  P   +  +  +  +R +   F   + +  E 
Sbjct: 608 KSQVTNIVY-------RNTDRLSIIDPNNP--ENDISGGSGNIRTIKAAFSQAHDLLRER 658

Query: 348 -----VELNKAQWSALFEP-----YLFFESYRNYL 372
                   NK  +S+L EP     Y  FE  R++L
Sbjct: 659 VATLTRSPNKQAFSSLLEPIFGGNYTSFEDQRDHL 693


>gi|67989518|ref|NP_001018181.1| poly(A) polymerase Cid14 [Schizosaccharomyces pombe 972h-]
 gi|81175166|sp|Q9UTN3.2|CID14_SCHPO RecName: Full=Poly(A) RNA polymerase cid14; Short=PAP; AltName:
           Full=Caffeine-induced death protein 14; AltName:
           Full=Polynucleotide adenylyltransferase cid14
 gi|62554069|emb|CAI79317.1| poly(A) polymerase Cid14 [Schizosaccharomyces pombe]
          Length = 684

 Score = 45.4 bits (106), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 29/168 (17%)

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSR--EEDFFFILHNILAEMEEVTELQPVLDAH 150
           ++ FGS+   ++ P +D+D + + P +  R  ++D F + H+ L +++  +E+Q +  A+
Sbjct: 282 LYVFGSFETKLYLPTSDLDLVIISPEHHYRGTKKDMFVLAHH-LKKLKLASEVQVITTAN 340

Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
           VP++KF      +D L         +  +DIS        ++P    L  C V +  +K 
Sbjct: 341 VPIIKF------VDPL--------TKVHVDIS-------FNQPG--GLKTCLVVNGFMKK 377

Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
            P +         +K +   R +     G L       LV    QL+P
Sbjct: 378 YPALRPLVI---IIKHFLNMRALNEVFLGGLSSYAIVCLVVSFLQLHP 422


>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
 gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
          Length = 891

 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 36/197 (18%)

Query: 202 RVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ------ 255
           R  D + + +P+   F    R +K WAK RG+Y+   GFL G+  ++L+ARV +      
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696

Query: 256 -----LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRR----DK 306
                      P  L++ FF  Y  + W +          +L F   DP  +R      +
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAH----------QLAF---DPFFHRHALPYTR 743

Query: 307 THHMPIITPAY--PCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALF----- 359
           T   P+    Y  P  N++   S  + + +  +F+    +    E     W+        
Sbjct: 744 TPREPLAVLGYFAPARNTALAASVPSTKTLAAEFRRAADVLRG-ENGALGWAGFLGGGSG 802

Query: 360 EPYLFFESYRNYLQVDI 376
               F  ++R+Y+++D+
Sbjct: 803 AKDDFLAAHRSYVKLDV 819


>gi|50557292|ref|XP_506054.1| YALI0F30525p [Yarrowia lipolytica]
 gi|49651924|emb|CAG78867.1| YALI0F30525p [Yarrowia lipolytica CLIB122]
          Length = 716

 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 75  LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
           + R+RG  + +  DA   +   GS+   +H P +DID +   P     E    + L +++
Sbjct: 274 VERVRGAVNGLWGDAK--VHVLGSFTTNMHLPQSDIDLVVCSPHGHYGERACIYQLSSVI 331

Query: 135 AEMEEVTELQPVLDAHVPVMKF--KFDGLSIDLLY 167
               +V ELQ +  A VP++KF     G+ +D+ +
Sbjct: 332 RSRMKVAELQTITKARVPIIKFIDSRTGVHVDISF 366


>gi|414870032|tpg|DAA48589.1| TPA: hypothetical protein ZEAMMB73_581254 [Zea mays]
          Length = 231

 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 29  EADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVED 88
           E D +R+  L +FL + G+  S E++ KRE+V+  +++I   W   +     Y   + + 
Sbjct: 158 EVDHRRSSSLVQFLKDEGVVLSPEDENKREKVIRELKKIVMHWANAV----AYEQSVPQG 213

Query: 89  -ANALIFTFGSYRLG 102
            A A++ T+ SY LG
Sbjct: 214 LATAIVLTYDSYTLG 228


>gi|322697398|gb|EFY89178.1| topoisomerase family protein TRF4 [Metarhizium acridum CQMa 102]
          Length = 702

 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 39/189 (20%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           A+A +  FGS+  G++ P AD+D +    SY+      +    + L + ++   +Q V D
Sbjct: 409 ASAQVHPFGSFMSGLYLPTADMDLVVCSASYMRGGPPTYLGAKSWLYKFQKFLVMQKVAD 468

Query: 149 ---------AHVPVMKF--KFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRS 197
                    A +P++KF  K  GL +D+ + +                            
Sbjct: 469 SDSIEVIAHARIPLVKFVDKLTGLKVDVSFEN---------------------------- 500

Query: 198 LNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLY 257
           L G    D  L            +  +K +   RG+   V G +GG +   LV  + Q+ 
Sbjct: 501 LGGVTAVDTFLSWKKQYPAMPILVTVIKHFLLMRGLNEPVNGGIGGFSVICLVVSMLQMM 560

Query: 258 PNAVPSMLV 266
           P+     L+
Sbjct: 561 PHVQSRSLI 569


>gi|328860813|gb|EGG09918.1| hypothetical protein MELLADRAFT_115680 [Melampsora larici-populina
           98AG31]
          Length = 987

 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 107/277 (38%), Gaps = 54/277 (19%)

Query: 34  RNRELEKFLVE------AGLYESKEEDEKREQVLGRIRQ-IAKDWVKELTRLRGYSDQMV 86
           +NR +++ L        A +  ++EEDE R  ++  IR+ +   W               
Sbjct: 226 KNRNVQQMLTAEIGSFVAYIRPTREEDELRLMIIEMIRKAVTMQW--------------- 270

Query: 87  EDANALIFTFGSYRLGVHGPGADIDALCVGPSYVS-REEDFFFILHNILAEMEEVTELQP 145
              +A +  FGS+   ++ PG DID + +    +   +    + L  +L E     ++  
Sbjct: 271 --PDADVVPFGSFGTKLYLPGGDIDLVILSTRMMKDAKSKILYRLAPLLREQNIGQDVVV 328

Query: 146 VLDAHVPVMKFK--FDGLSIDLLYASISRLVVREDLD--ISDMSVLNDVDEPTVRSLNGC 201
           +  A VP++KFK  F    +D+     + LV  E ++  + D+  L+       R     
Sbjct: 329 IAKAKVPIIKFKTIFGNFQVDISINQSNGLVALEKVNELLDDVKYLSKDLRAEQRHHQHS 388

Query: 202 RVADQ----------------ILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVN 245
           R   +                I K+V  +      +  +K   K+RG+    +G LG  +
Sbjct: 389 RNQSKRRNEETNLEMDEEEEAISKVVEELGAAKCMILVIKSVLKQRGMNEVYSGGLGSYS 448

Query: 246 WALLVARVCQLY---------PNAVPSMLVSRFFRVY 273
              LV    QL+         PN    +L+  FF +Y
Sbjct: 449 IICLVISFLQLHPKIQRGDIDPNKNLGVLLLEFFELY 485


>gi|302917206|ref|XP_003052397.1| hypothetical protein NECHADRAFT_1558 [Nectria haematococca mpVI
           77-13-4]
 gi|256733337|gb|EEU46684.1| hypothetical protein NECHADRAFT_1558 [Nectria haematococca mpVI
           77-13-4]
          Length = 630

 Score = 43.1 bits (100), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 45/192 (23%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           A+A +  FGSY  G++ P AD+D +    SY+      +    + L +  +    Q V D
Sbjct: 350 ASATVHPFGSYMSGLYLPTADMDLVVCSASYMRGGPPTYLAAKSWLYKFSKFLTSQRVAD 409

Query: 149 ---------AHVPVMKF--KFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRS 197
                    A VP++K+  K  GL +D+ +                             +
Sbjct: 410 PDSIEVIAHARVPLVKYVDKQTGLKVDISF----------------------------EN 441

Query: 198 LNGCRVADQILK---LVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
           L G +  D  L+   L P +    T    +K +   RG+   V G +GG +   LV  + 
Sbjct: 442 LGGVQAVDTFLRWKELYPAMPILVT---VIKHFLLMRGLNEPVNGGIGGFSVICLVVSML 498

Query: 255 QLYPNAVPSMLV 266
           QL P      LV
Sbjct: 499 QLNPQVQSRSLV 510


>gi|410075647|ref|XP_003955406.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
 gi|372461988|emb|CCF56271.1| hypothetical protein KAFR_0A08370 [Kazachstania africana CBS 2517]
          Length = 630

 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 38/176 (21%)

Query: 89  ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLD 148
           +++ +  FGSY   ++ PG+DID +    S       + + L   L +    T ++ +  
Sbjct: 206 SDSELLVFGSYATDLYLPGSDIDCVVNSASGNKEHRSYLYELARFLKKKNLATSIEVIAR 265

Query: 149 AHVPVMKF--KFDGLSIDLLYASISRL----VVREDLDISDMSVLNDVDEPTVRSLNGCR 202
           A VP++KF     G+ ID+ +   + +    ++RE LD++          P +R      
Sbjct: 266 ARVPIIKFIEPESGVHIDISFERTNGVEAAKLIREWLDMT----------PGLR------ 309

Query: 203 VADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYP 258
                 +LV  V+ F T  R          V+   TG LGG +   LV     L+P
Sbjct: 310 ------ELVLIVKQFLTARRL-------NDVH---TGGLGGFSIICLVYSFLHLHP 349


>gi|376259447|ref|YP_005146167.1| dockerin-like protein [Clostridium sp. BNL1100]
 gi|373943441|gb|AEY64362.1| dockerin-like protein [Clostridium sp. BNL1100]
          Length = 504

 Score = 42.4 bits (98), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 621 VEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHEELEL--NAGLGSVLQSTSGI 678
           + G    +++ SDC D D   ++EN  L    A  D +H EL+L  N G  +VL+S  GI
Sbjct: 264 ITGGTLNITATSDCIDTDGDIIIENGTL-ALSAGDDGIHSELDLTFNGGTTTVLKSYEGI 322

Query: 679 DSETVVQKPVMRLSLTST 696
           + +TV       +++T+T
Sbjct: 323 EGKTVTTVNNGTINITAT 340


>gi|255564100|ref|XP_002523048.1| nucleic acid binding protein, putative [Ricinus communis]
 gi|223537731|gb|EEF39352.1| nucleic acid binding protein, putative [Ricinus communis]
          Length = 644

 Score = 42.0 bits (97), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 33/233 (14%)

Query: 55  EKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANAL-IFTFGSYRLGVHGPGADIDAL 113
           EKR Q +  + Q +    ++   +  Y  ++++   A  +F FGS  L  + P  DID  
Sbjct: 37  EKRTQEILWVLQPSSSSEQKRKEVIDYIQRLIKHHYATEVFPFGSVPLKTYLPDGDIDLT 96

Query: 114 CVGPSYVSREEDFFFILHNIL--AEMEEVTELQPV--LDAHVPVMKFKFDGLSIDLLYAS 169
            +  S+ + EED    + +IL  AE    +E++ V  + A V V+K     +S+D+ +  
Sbjct: 97  AL--SHQNMEEDLAREVCDILTYAEQNLESEVKDVRYIQAQVKVVKCSVKNISVDISFNQ 154

Query: 170 ISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAK 229
           ++ L          +  L  VD+     L G    D +LK      H    ++   F+  
Sbjct: 155 MAGLCA--------LCFLEQVDQ-----LIG---KDHLLK------HSIILIKAWCFYES 192

Query: 230 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSML--VSRFFRVYTMWRWPN 280
           R  +     G L      +LV  +  ++ +++P  L  + RF   Y+ + W N
Sbjct: 193 R--ILGAHHGLLSTYALEILVLYIVNVFHSSLPGPLAVLYRFLEYYSTFDWDN 243


>gi|50294195|ref|XP_449509.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528823|emb|CAG62485.1| unnamed protein product [Candida glabrata]
          Length = 626

 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 51/248 (20%)

Query: 50  SKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGAD 109
           S+EE E R + + +IR+  K         R ++D       A +  FGSY   ++ PG+D
Sbjct: 201 SREEIETRNKTIAKIRRSVK---------RLWTD-------ADLQVFGSYATDMYLPGSD 244

Query: 110 IDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYAS 169
           ID +    S       + + L   L      T ++ +  + VP++KF             
Sbjct: 245 IDCVVNSKSGDKENRQYLYELARHLKNDGLATRVEVIAKSRVPIIKF------------- 291

Query: 170 ISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAK 229
                V  + DI        +D    RS NG   A  I + + +          +K +  
Sbjct: 292 -----VEPESDIH-------IDVSFERS-NGLEAAKLIREWIGDTPGLRELTLVVKQFLH 338

Query: 230 RRGVYSNVTGFLGGVNWALLVARVCQLYPNAVP---------SMLVSRFFRVYTMWRWPN 280
            R +    TG LGG +   LV    +L+P  +           +L+  FF +Y      +
Sbjct: 339 ARRLNDVHTGGLGGFSIICLVFSFLRLHPRIITGDIDPLDNLGVLLIEFFELYGKNFAYD 398

Query: 281 PVMLCAID 288
            V +C  D
Sbjct: 399 DVAICVDD 406


>gi|125581305|gb|EAZ22236.1| hypothetical protein OsJ_05891 [Oryza sativa Japonica Group]
          Length = 126

 Score = 42.0 bits (97), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 6/50 (12%)

Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGG 243
           TVRSLNG RVAD+IL+LVP+   F TT       A R G+   + GF G 
Sbjct: 32  TVRSLNGVRVADEILRLVPDAAAFHTTA------AVREGIDKLLRGFDGA 75


>gi|343172004|gb|AEL98706.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
          Length = 501

 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 43/211 (20%)

Query: 77  RLRGYSDQMVEDA------NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           R R  + Q V D       N  +  FGSYR G++ P +DID + +  S +   +     L
Sbjct: 142 RSRNSAIQRVSDVIKYIWPNCRVEVFGSYRTGLYLPSSDIDVVILD-SNIKSPQIGLQAL 200

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
              L++     ++Q +  A VP++KF                  V +  D+    V  DV
Sbjct: 201 SRALSQKGIAKKIQVIGKARVPIIKF------------------VEKVTDVQ-FDVSFDV 241

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D       NG + A+ I  ++  +         LK + ++R +    +G +G  ++ALL 
Sbjct: 242 D-------NGPKAAEYIKDVISRLPPLRPLCLILKVFLQQRELNEVYSGGIG--SYALLA 292

Query: 251 ARVCQL--------YPNAVPSMLVSRFFRVY 273
             +  L        YP     +L+ +FF  Y
Sbjct: 293 MLIAMLKSVNEGQRYPEHNLGVLLVKFFEFY 323


>gi|343172002|gb|AEL98705.1| Nucleotidyltransferase family protein, partial [Silene latifolia]
          Length = 501

 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 43/211 (20%)

Query: 77  RLRGYSDQMVEDA------NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFIL 130
           R R  + Q V D       N  +  FGSYR G++ P +DID + +  S +   +     L
Sbjct: 142 RSRNSAIQRVSDVIKYIWPNCRVEVFGSYRTGLYLPSSDIDVVILD-SNIKSPQIGLQAL 200

Query: 131 HNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDV 190
              L++     ++Q +  A VP++KF                  V +  D+    V  DV
Sbjct: 201 SRALSQKGIAKKIQVIGKARVPIIKF------------------VEKVTDVQ-FDVSFDV 241

Query: 191 DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 250
           D       NG + A+ I  ++  +         LK + ++R +    +G +G  ++ALL 
Sbjct: 242 D-------NGPKAAEYIQDVISRLPPLRPLCLILKVFLQQRELNEVYSGGIG--SYALLA 292

Query: 251 ARVCQL--------YPNAVPSMLVSRFFRVY 273
             +  L        YP     +L+ +FF  Y
Sbjct: 293 MLIAMLKSVNEGQRYPEHNLGVLLVKFFEFY 323


>gi|145533334|ref|XP_001452417.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420105|emb|CAK85020.1| unnamed protein product [Paramecium tetraurelia]
          Length = 361

 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 44/194 (22%)

Query: 50  SKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGAD 109
           + EE  +REQ + R+    K++  E+            D  A    FGS++  ++ P AD
Sbjct: 78  TSEEHRRREQAIMRVETFIKEFASEV------------DIQA----FGSFKTKLYLPNAD 121

Query: 110 IDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYAS 169
           ID + +  S  ++E   +  +   L + ++   +  + +A VP++KF      ++  Y  
Sbjct: 122 IDVVMIDKSMSAKE--LYKKVAQSLMKSDKFENVNLIANAKVPIIKF----FEVESQY-- 173

Query: 170 ISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAK 229
                 + D+  + M  L  +DE         R A     + P  ++    L+C+    K
Sbjct: 174 ------QFDISFNQMDGLKQIDE--------IRKA---FTIYPEFKYLIMILKCM---LK 213

Query: 230 RRGVYSNVTGFLGG 243
           +R +    +G +G 
Sbjct: 214 QRELNETYSGGIGS 227


>gi|444729496|gb|ELW69909.1| Ras-associating and dilute domain-containing protein [Tupaia
          chinensis]
          Length = 1158

 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 34/56 (60%)

Query: 12 PPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQI 67
          P K YG++ PIS+A P + D +  ++L + L   G++E +EE + R  +L ++  +
Sbjct: 17 PQKHYGISSPISLAAPKDTDCELTQKLIETLKPFGVFEEEEELQSRILILEKLNNL 72


>gi|366988339|ref|XP_003673936.1| hypothetical protein NCAS_0A09970 [Naumovozyma castellii CBS 4309]
 gi|342299799|emb|CCC67555.1| hypothetical protein NCAS_0A09970 [Naumovozyma castellii CBS 4309]
          Length = 683

 Score = 40.8 bits (94), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 18/108 (16%)

Query: 50  SKEEDEKREQVLGRIRQ-IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGA 108
           SK+E   R + L R+R+ +++ W                  +A +  FGSY   ++ PG+
Sbjct: 212 SKDEIHTRNRTLARLRKAVSEQW-----------------KDASLHVFGSYATDLYLPGS 254

Query: 109 DIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKF 156
           DID   +  +         + L   L +    T L+ +  A VP++KF
Sbjct: 255 DIDCAVISRNRDKDRRQCLYDLAKSLKQKGLATHLEVIAKARVPIIKF 302


>gi|410077415|ref|XP_003956289.1| hypothetical protein KAFR_0C01610 [Kazachstania africana CBS 2517]
 gi|372462873|emb|CCF57154.1| hypothetical protein KAFR_0C01610 [Kazachstania africana CBS 2517]
          Length = 537

 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 52/235 (22%), Positives = 86/235 (36%), Gaps = 55/235 (23%)

Query: 50  SKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGAD 109
           S  E E R   + RIR    D VKEL              +A +  FGSY   ++ PG+D
Sbjct: 159 SSTEIEDRNITISRIR----DAVKELW------------PDADLHVFGSYSTDLYLPGSD 202

Query: 110 IDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKF--KFDGLSIDLLY 167
           ID +          ++  + L   L   +  T+++ V  A VP++KF     G+ ID+ +
Sbjct: 203 IDCVVNSERGNKDSKNCLYQLAKFLTTKKLATDVEVVSKARVPIIKFVEPHTGIHIDVSF 262

Query: 168 ASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFW 227
                                          NG   A  I   + +       +  +K +
Sbjct: 263 ----------------------------ERTNGLEAAKLIRSWLDSTAGLRELVLVIKQF 294

Query: 228 AKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPS---------MLVSRFFRVY 273
              R + +  TG LGG +   LV     ++P  + +         +L+  FF +Y
Sbjct: 295 LHARRLNNVHTGGLGGFSIICLVFTFLHMHPRIITNEIDPIDNLGVLLIDFFELY 349


>gi|194696942|gb|ACF82555.1| unknown [Zea mays]
          Length = 131

 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 13/136 (9%)

Query: 381 ADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKPG 440
            ++L  W GWV+SR R L L +E  + G + C P P E VD +    +  FF GL     
Sbjct: 2   GEELRDWVGWVKSRFRNLLLKLE--SLG-VYCDPDPSEQVDHTITDPNVVFFWGL----- 53

Query: 441 EVVQEGQQFDIRGSVEEFKLSINMYMFWKPGM---EICVSHIRRKQIPPYVFPEGYKRTR 497
            + +   Q  I    E+F  S+   ++ K      +I +S +   Q+P  VF       +
Sbjct: 54  -IYRRNIQICISSLKEDFMKSVCNNIYGKEKCAHSDITMSIVGPPQLPKSVFDLSVYSEK 112

Query: 498 HPR-LASQQRSSENGN 512
            P+ +   Q   +N N
Sbjct: 113 LPQHMMGHQLMKQNYN 128


>gi|221484307|gb|EEE22603.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii GT1]
          Length = 593

 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 17/123 (13%)

Query: 507 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 557
           +S NG     G  L R+ D         P ++   GPEK  S+SP+ +  LS D  AP S
Sbjct: 20  ASSNGAMRSLGQRLSRQDDASGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78

Query: 558 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 611
               T +    V+       +    G + ++++V+T + SE       G C   G E V+
Sbjct: 79  ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNAVVTCICSECVTRLTDGCCARCGRECVS 137

Query: 612 GSS 614
            ++
Sbjct: 138 AAT 140


>gi|387196341|gb|AFJ68755.1| DNA polymerase sigma subunit, partial [Nannochloropsis gaditana
           CCMP526]
          Length = 419

 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 93  IFTFGSYRLGVHGPGADIDALCVGPSYVSREE--DFFFILHNILAEMEEVTELQPVLDAH 150
           +  FGS    V  P +DID + + P+ +   +     F L     + E V+ ++ +  A 
Sbjct: 108 VHVFGSEATKVFLPDSDIDMVVLPPTDLPLHQIRKNLFTLAEAFKQEESVSGMEIISQAR 167

Query: 151 VPVMKFKFDGLSIDLLYASISRL 173
           VP++K +F  L +D+ ++S S L
Sbjct: 168 VPIVKLRFQNLQVDISFSSDSGL 190


>gi|431822613|gb|AGA84149.1| heparin binding antigen, partial [Neisseria meningitidis]
          Length = 311

 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 12/139 (8%)

Query: 495 RTRHPRLASQQR---SSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPD 551
           R RHP   SQ     S+EN     TG+G     D    + +GP+     +    DSL+P+
Sbjct: 16  RARHPHKVSQDMAAVSAEN-----TGNGGAATTDKPKNEDEGPQNDMPQNAADTDSLTPN 70

Query: 552 HLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVGSCEDVGNESVA 611
           H    ++ +G   N  P   +      +     D++N+             E+ GN +  
Sbjct: 71  HTTAPNMPAGNMGNQAPDTGESAQPENKP----DMANAGDGIQGDDPSAGGENAGNTAAQ 126

Query: 612 GSSEGNNGSVEGSNNPVSS 630
           G+++  N    GS NP SS
Sbjct: 127 GTNQAENNQAAGSQNPASS 145


>gi|224128147|ref|XP_002329093.1| predicted protein [Populus trichocarpa]
 gi|222869762|gb|EEF06893.1| predicted protein [Populus trichocarpa]
          Length = 543

 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 90  NALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDA 149
           N  +  FGS+R G++ P +DID + +G S +   +     L   L++     ++Q +  A
Sbjct: 163 NCKVEVFGSFRTGLYLPTSDIDVVILG-SGLKSPQIGLNALSRALSQKGVAKKIQVIARA 221

Query: 150 HVPVMKF--KFDGLSIDLLY 167
            VP++KF  K  G+S D+ +
Sbjct: 222 RVPIVKFVEKRSGVSFDISF 241


>gi|221505715|gb|EEE31360.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii VEG]
          Length = 593

 Score = 39.3 bits (90), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)

Query: 507 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 557
           +S NG     G  L R+ D         P ++   GPEK  S+SP+ +  LS D  AP S
Sbjct: 20  ASSNGAMRSLGQRLSRQDDTSGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78

Query: 558 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 611
               T +    V+       +    G + +++ V+T + SE       G C   G E V+
Sbjct: 79  ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNGVVTCICSECVTRLTDGCCARCGRECVS 137

Query: 612 GSS 614
            ++
Sbjct: 138 AAT 140


>gi|237838251|ref|XP_002368423.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii ME49]
 gi|211966087|gb|EEB01283.1| 4-nitrophenylphosphatase, putative [Toxoplasma gondii ME49]
          Length = 593

 Score = 39.3 bits (90), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)

Query: 507 SSENGNEYQTGSGLKRKKD---------PESVDQDGPEKRQSISPQKQDSLSPDHLAPSS 557
           +S NG     G  L R+ D         P ++   GPEK  S+SP+ +  LS D  AP S
Sbjct: 20  ASSNGAMRSLGQRLSRQDDASGSCGSTCPAALSPSGPEKLHSLSPRAKSCLS-DSAAPPS 78

Query: 558 VRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEV------GSCEDVGNESVA 611
               T +    V+       +    G + +++ V+T + SE       G C   G E V+
Sbjct: 79  ASPLTLTRTA-VLTGSVTFREVPRAGAEATSNGVVTCICSECVTRLTDGCCARCGRECVS 137

Query: 612 GSS 614
            ++
Sbjct: 138 AAT 140


>gi|365982357|ref|XP_003668012.1| hypothetical protein NDAI_0A06140 [Naumovozyma dairenensis CBS 421]
 gi|343766778|emb|CCD22769.1| hypothetical protein NDAI_0A06140 [Naumovozyma dairenensis CBS 421]
          Length = 684

 Score = 38.9 bits (89), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 26/152 (17%)

Query: 13  PKQYGVTKPISMAGPTEADMQRNRELEKFLV------EAGLYESKEEDEKREQVLGRIRQ 66
           PK+  +T+          D  + RE+  +L        + +  S+EE E R + + ++R+
Sbjct: 176 PKKVNLTQNSDYPWILNQDHSKQREIADWLTLEIKDFVSYISPSREEIELRNKTISKLRK 235

Query: 67  IAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREED- 125
                VKEL     +SD  +         FGSY   ++ PG+DID  CV  S +  +E  
Sbjct: 236 A----VKEL-----WSDSQLH-------IFGSYATDLYLPGSDID--CVVNSKMGDKEQR 277

Query: 126 -FFFILHNILAEMEEVTELQPVLDAHVPVMKF 156
            + + L   L +    ++++ +  A VP++KF
Sbjct: 278 QYLYDLARHLKQKGLTSQVEVIAKARVPIIKF 309


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.133    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,254,998,379
Number of Sequences: 23463169
Number of extensions: 484459635
Number of successful extensions: 1395442
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 318
Number of HSP's that attempted gapping in prelim test: 1391686
Number of HSP's gapped (non-prelim): 2143
length of query: 697
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 547
effective length of database: 8,839,720,017
effective search space: 4835326849299
effective search space used: 4835326849299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)