BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005427
(697 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 141/315 (44%), Gaps = 68/315 (21%)
Query: 431 WGSFATCGRRETMEDTHFLMPHMYNQKE-----------------IHMFGIFDGHRGSAA 473
+G + CGRR MED+ +P H FG++DGH GS
Sbjct: 14 YGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQV 73
Query: 474 AEFSARAL------------PGFLQNLGSTTRPTDALLEAFIRTDVAFRNELDSLRKSKR 521
A + + P F + AL +F+R D +E++++ +
Sbjct: 74 ANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVD----SEIETVAHAPE 129
Query: 522 VVQKDWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERERVVS 581
V G T++ A++ +FVAN GD RA+LCRG P ALS DH +E R+ +
Sbjct: 130 TV------GSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEA 183
Query: 582 AGGNV-NWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEYLVMASDGL 640
AGG V W + RV L ++RSIGD LKP+V D+ L++ASDGL
Sbjct: 184 AGGKVIRW--NGARVF-GVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGL 240
Query: 641 WDVVSHVEAVGIIKDTV-----------------------KEPGMCS--KRLATEAAERG 675
WDV+++ E + + + K+P S + L+ A ++G
Sbjct: 241 WDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKG 300
Query: 676 SKDNITVIVVFLQPV 690
SKDNI+V+VV L+ +
Sbjct: 301 SKDNISVVVVDLKGI 315
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 139/310 (44%), Gaps = 65/310 (20%)
Query: 431 WGSFATCGRRETMEDTHFLMPHMYN-------------QKEIHMFGIFDGHRGSAAAEFS 477
+G + CGRR MED +P Q H FG++DGH GS A +
Sbjct: 11 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 70
Query: 478 ARALPGFLQNLGSTTRP------------TDALLEAFIRTDVAFRNELDSLRKSKRVVQK 525
+ L + +P AL +F+R D +E++S+
Sbjct: 71 RERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVD----SEIESVAPET----- 121
Query: 526 DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERERVVSAGGN 585
G T++ A++ + +FVAN GD RA+LCRG LS DH +E R+ +AGG
Sbjct: 122 ---VGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGK 178
Query: 586 VNWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEYLVMASDGLWDVVS 645
V Q + RV L ++RSIGD LKP++ D+ L++ASDG+WDV++
Sbjct: 179 V-IQWNGARVF-GVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMT 236
Query: 646 HVEAVGIIKDTV------------------------KEPGMCS--KRLATEAAERGSKDN 679
EA + + + K+P S + L+ A +RGSKDN
Sbjct: 237 DEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDN 296
Query: 680 ITVIVVFLQP 689
I+V+VV L+P
Sbjct: 297 ISVVVVDLKP 306
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 139/310 (44%), Gaps = 65/310 (20%)
Query: 431 WGSFATCGRRETMEDTHFLMPHMYN-------------QKEIHMFGIFDGHRGSAAAEFS 477
+G + CGRR MED +P Q H FG++DGH GS A +
Sbjct: 14 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 73
Query: 478 ARALPGFLQNLGSTTRP------------TDALLEAFIRTDVAFRNELDSLRKSKRVVQK 525
+ L + +P AL +F+R D +E++S+
Sbjct: 74 RERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVD----SEIESVAPET----- 124
Query: 526 DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERERVVSAGGN 585
G T++ A++ + +FVAN GD RA+LCRG LS DH +E R+ +AGG
Sbjct: 125 ---VGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGK 181
Query: 586 VNWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEYLVMASDGLWDVVS 645
V Q + RV L ++RSIGD LKP++ D+ L++ASDG+WDV++
Sbjct: 182 V-IQWNGARVF-GVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMT 239
Query: 646 HVEAVGIIKDTV------------------------KEPGMCS--KRLATEAAERGSKDN 679
EA + + + K+P S + L+ A +RGSKDN
Sbjct: 240 DEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDN 299
Query: 680 ITVIVVFLQP 689
I+V+VV L+P
Sbjct: 300 ISVVVVDLKP 309
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 142/317 (44%), Gaps = 65/317 (20%)
Query: 424 TYYPVLSWGSFATCGRRETMEDTHFLMPHMYN-------------QKEIHMFGIFDGHRG 470
++ V +G + CGRR MED +P Q H FG++DGH G
Sbjct: 19 SHMSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGG 78
Query: 471 SAAAEFSARALPGFLQNLGSTTRP------------TDALLEAFIRTDVAFRNELDSLRK 518
S A + + L + +P AL +F+R D +E++S+
Sbjct: 79 SQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVD----SEIESVAP 134
Query: 519 SKRVVQKDWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERER 578
G T++ A++ + +FVAN GD RA+LCRG LS DH +E R
Sbjct: 135 ET--------VGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAAR 186
Query: 579 VVSAGGNVNWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEYLVMASD 638
+ +AGG V Q + RV L ++RSIGD LKP++ D+ L++ASD
Sbjct: 187 IEAAGGKV-IQWNGARVF-GVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASD 244
Query: 639 GLWDVVSHVEAVGIIKDTV------------------------KEPGMCS--KRLATEAA 672
G+WDV++ EA + + + K+P S + L+ A
Sbjct: 245 GVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAI 304
Query: 673 ERGSKDNITVIVVFLQP 689
+RGSKDNI+V+VV L+P
Sbjct: 305 QRGSKDNISVVVVDLKP 321
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILST----SEELDNFHKELQLLC 116
+ +P + I G+ V+ A G VAVK IL +E ++ F +E+ ++
Sbjct: 32 MDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMK 89
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKA 174
+L HP + F+ A +PPN E+ +L LH +D+ L +A +AK
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 175 LQYLHNLG--IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGG 232
+ YLHN IVHRD+K N+L+D+ + DFGL+ K +
Sbjct: 150 MNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL----------------KASXF 193
Query: 233 FHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLE 292
K GT +MAPE+L+ E +EKSDVYSFG+ + EL T P+ +L
Sbjct: 194 LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL----------- 242
Query: 293 MNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
Q+ AAV G + + L + ++I+ CW P RPSF+ I
Sbjct: 243 ---NPAQVVAAV---GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 34/293 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 9 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH E + +++ IA Q A+ + YLH
Sbjct: 68 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L + + DFGLA + W +G + + G
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 172
Query: 241 TLIYMAPEILKKEI---HSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ + +S +SDVY+FGI + EL+TG +PY+++ Q ++EM
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEM---- 225
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
V G L P L+ + P + L+ C RPSF I E++
Sbjct: 226 ------VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 135/293 (46%), Gaps = 43/293 (14%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILST----SEELDNFHKELQLLC 116
+ +P + I G+ V+ A G VAVK IL +E ++ F +E+ ++
Sbjct: 32 MDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVK--ILMEQDFHAERVNEFLREVAIMK 89
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKA 174
+L HP + F+ A +PPN E+ +L LH +D+ L +A +AK
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 175 LQYLHNLG--IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGG 232
+ YLHN IVHR++K N+L+D+ + DFGL+ K +
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL----------------KASTF 193
Query: 233 FHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLE 292
K+ GT +MAPE+L+ E +EKSDVYSFG+ + EL T P+ +L
Sbjct: 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL----------- 242
Query: 293 MNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
Q+ AAV G + + L + ++I+ CW P RPSF+ I
Sbjct: 243 ---NPAQVVAAV---GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 34/293 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH E + +++ IA Q A+ + YLH
Sbjct: 80 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L + + DFGLA + W +G + + G
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS--------RW------SGSHQFEQLSG 184
Query: 241 TLIYMAPEILKKEI---HSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ + +S +SDVY+FGI + EL+TG +PY+++ Q ++EM
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEM---- 237
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
V G L P L+ + P + L+ C RPSF I E++
Sbjct: 238 ------VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 34/293 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ ++ P ++ E +L LH E + +++ IA Q A+ + YLH
Sbjct: 80 VNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L + + DFGLA + W +G + + G
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS--------RW------SGSHQFEQLSG 184
Query: 241 TLIYMAPEILKKEI---HSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ + +S +SDVY+FGI + EL+TG +PY+++ Q ++EM
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---IIEM---- 237
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
V G L P L+ + P + L+ C RPSF I E++
Sbjct: 238 ------VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 33 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 92 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 196
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 243
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 32 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 91 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 195
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 242
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 243 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 297
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 33 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 92 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS--------RW------SGSHQFEQLSG 196
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 243
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 10 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 69 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 173
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 220
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 25 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 84 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS--------RW------SGSHQFEQLSG 188
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 235
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 236 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 290
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 10 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 69 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 173
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 220
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 7 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 66 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 170
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 171 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 217
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 218 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 272
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 64 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 168
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 215
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ ++ P ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 64 VNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS--------RW------SGSHQFEQLSG 168
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 215
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDH 120
+P T+ I G+ VY+ G VAVK ++ T ++L F E+ +L K H
Sbjct: 5 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ F+ KP ++ E +L LH+ E + +++ IA Q A+ + YLH
Sbjct: 64 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ L +L + DFGLA + W +G + + G
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS--------RW------SGSHQFEQLSG 168
Query: 241 TLIYMAPEILK---KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
++++MAPE+++ K +S +SDVY+FGI + EL+TG +PY+++
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-------------NR 215
Query: 298 QQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q+ V G L P L+ + P ++ L+ C RP F I ++L+
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 135/302 (44%), Gaps = 52/302 (17%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVK----KPILSTSEELDNFHKELQLLCKLDHP 121
+ TL I G VY A G +VAVK P S+ ++N +E +L L HP
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN- 180
+ K PN EF L L + P D ++ A Q+A+ + YLH+
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--DILVNWAVQIARGMNYLHDE 124
Query: 181 --LGIVHRDVKPANVLLDR--------NLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
+ I+HRD+K +N+L+ + N + DFGLA + W + K +
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----------REWHRTTKMS 173
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTV 290
G +MAPE+++ + S+ SDV+S+G+ + ELLTG VP+ + A A+ V
Sbjct: 174 AA-------GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
Query: 291 LEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
MN + + P L++ CW+ +PH+RPSF++I +L
Sbjct: 227 -AMNKLALPIPSTC----------------PEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269
Query: 351 LV 352
+
Sbjct: 270 TI 271
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 429 LSWGSFATCGRRETMEDTHFLMPHMYNQKEIHMFGIFDGHRGSAAAEFSARALPGFLQNL 488
L+ GS + G R + ED H + + +Q F ++DGH G+ A++ + LP FL+ +
Sbjct: 23 LASGSSSMQGWRISQEDAHNCILNFDDQ--CSFFAVYDGHGGAEVAQYCSLHLPTFLKTV 80
Query: 489 GSTTRPT--DALLEAFIRTDVAFRNE--LDSLRK-SKRVVQKDWHPG----CTAIAALIV 539
+ R AL EAF+ D E ++ L+ S D PG CTA+ AL+
Sbjct: 81 EAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLH 140
Query: 540 RNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERERVVSAGGNVNWQVDTWRVGPPA 599
L+VANAGD R ++CR G +S DH E +R+ AGG V RV
Sbjct: 141 GKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTLD---GRVN-GG 196
Query: 600 LQVTRSIGDDDLK-----PA----VXXXXXXXXXXXXXXDEYLVMASDGLWDVVSHVEAV 650
L ++R+IGD K PA + DE++V+A DG+W+ ++ + V
Sbjct: 197 LNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVV 256
Query: 651 GIIKDTVKEPGMCSKRLATEAAE-------RGSK---DNITVIVV 685
+++ + +PGM ++ E + RG DN+T I+V
Sbjct: 257 QFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIV 301
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVK--KPILSTSEELDNFHKELQLLCKLDHPGL 123
S L + I G+ VY+ G VAVK K + T E+ F E+ +L K H +
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 124 AKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
F+ K N ++ E +L + LHV+E + Q++ IA Q A+ + YLH I
Sbjct: 95 LLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
+HRD+K N+ L L + DFGLA + W +G + G+++
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKS--------RW------SGSQQVEQPTGSVL 199
Query: 244 YMAPEILKKEIH---SEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQL 300
+MAPE+++ + + S +SDVYS+GI + EL+TG +PY+ + Q+
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-------------NRDQI 246
Query: 301 TAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEH 355
V G P L+ L P ++ L+ C RP F I ++L L+H
Sbjct: 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL-LQH 300
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 138/298 (46%), Gaps = 62/298 (20%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSE-------ELDNFHKELQLLCKLDHPGLA 124
I +G +V++ L D VA+K IL SE + F +E+ ++ L+HP +
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 125 KFVAAHAKPPNYMFFF----EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
K PP + F + Y L +K H +WS + +L IA ++Y+ N
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLY--HRLLDKAHPIKWSVKLRLMLDIAL----GIEYMQN 140
Query: 181 LG--IVHRDVKPANVLL---DRN--LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
IVHRD++ N+ L D N +C +ADFGL++ +++ +S
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVS-------------- 184
Query: 234 HKKNMVGTLIYMAPEIL--KKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
++G +MAPE + ++E ++EK+D YSF + + +LTG P+
Sbjct: 185 ---GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------------ 229
Query: 292 EMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALEL 349
E +Y + + + GLRP + P + ++I+ CW G+P RP FS I EL
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 102
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 103 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 163 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 207
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 208 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 249
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRKSLKEE 362
+CW +P RP F+++ +L +LE K+ +EE
Sbjct: 250 KCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 282
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 45/278 (16%)
Query: 74 IARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKP 133
+ RGA VV +A + VA+K+ + + E F EL+ L +++HP + K A P
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 134 PNYMFFFEFYESRNLAEKLHVEEWSP--SVDQVLMIAAQLAKALQYLHNL---GIVHRDV 188
E+ E +L LH E P + + Q ++ + YLH++ ++HRD+
Sbjct: 75 --VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 132
Query: 189 KPANVLL-DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
KP N+LL + DFG A + H N G+ +MAP
Sbjct: 133 KPPNLLLVAGGTVLKICDFGTACDIQT-------------------HMTNNKGSAAWMAP 173
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSG 307
E+ + +SEK DV+S+GI + E++T P+ ++ A ++ AV +G
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA------------FRIMWAVHNG 221
Query: 308 GLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
P++ + LP I SL+ RCW +P RPS +I
Sbjct: 222 TRPPLIKN----LPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 101
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 102 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 162 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 206
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 207 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 248
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRKSLKEE 362
+CW +P RP F+++ +L +LE K+ +EE
Sbjct: 249 KCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 281
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 62/298 (20%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSE-------ELDNFHKELQLLCKLDHPGLA 124
I +G +V++ L D VA+K IL SE + F +E+ ++ L+HP +
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 125 KFVAAHAKPPNYMFFF----EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
K PP + F + Y L +K H +WS + +L IA ++Y+ N
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLY--HRLLDKAHPIKWSVKLRLMLDIAL----GIEYMQN 140
Query: 181 LG--IVHRDVKPANVLL---DRN--LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
IVHRD++ N+ L D N +C +ADFG ++ +++ +S
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVS-------------- 184
Query: 234 HKKNMVGTLIYMAPEIL--KKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
++G +MAPE + ++E ++EK+D YSF + + +LTG P+
Sbjct: 185 ---GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------------ 229
Query: 292 EMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALEL 349
E +Y + + + GLRP + P + ++I+ CW G+P RP FS I EL
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 45/278 (16%)
Query: 74 IARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKP 133
+ RGA VV +A + VA+K+ + + E F EL+ L +++HP + K A P
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 134 PNYMFFFEFYESRNLAEKLHVEEWSP--SVDQVLMIAAQLAKALQYLHNL---GIVHRDV 188
E+ E +L LH E P + + Q ++ + YLH++ ++HRD+
Sbjct: 74 --VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 131
Query: 189 KPANVLL-DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
KP N+LL + DFG A + H N G+ +MAP
Sbjct: 132 KPPNLLLVAGGTVLKICDFGTACDIQT-------------------HMTNNKGSAAWMAP 172
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSG 307
E+ + +SEK DV+S+GI + E++T P+ ++ A ++ AV +G
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA------------FRIMWAVHNG 220
Query: 308 GLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
P++ + LP I SL+ RCW +P RPS +I
Sbjct: 221 TRPPLIKN----LPKPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 96
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 97 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 157 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 201
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 202 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 243
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRKSLKEE 362
+CW +P RP F+++ +L +LE K+ +EE
Sbjct: 244 KCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 276
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 21/262 (8%)
Query: 432 GSFATCGRRETMEDTHFLMPHMYNQKEIHMFGIFDGHRGSAAAEFSARALPGFLQNLGST 491
G + G+R+ ED F + + E+ F ++DGH G AAA+F + + +L
Sbjct: 125 GCASQIGKRKENED-RFDFAQLTD--EVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK 181
Query: 492 TRPTDALLE-AFIRTDVAFRNELDSLRKSKRVVQKDWHPGCTAIAALIVRN-RLFVANAG 549
+ + LL AF+ D AF + + + G TA AL+ L VA+ G
Sbjct: 182 EKNLETLLTLAFLEIDKAFSSHARLSADATLLTS-----GTTATVALLRDGIELVVASVG 236
Query: 550 DCRAILCRGGHPFALSRDHVASCLEERERVVSAGGNVNWQVDTWRVGPP----ALQVTRS 605
D RAILCR G P L+ DH +E+ER+ GG V W +G P L +TRS
Sbjct: 237 DSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN----SLGQPHVNGRLAMTRS 292
Query: 606 IGDDDLKPA--VXXXXXXXXXXXXXXDEYLVMASDGLWDVVSHVEAVGIIKDTVKEPGMC 663
IGD DLK + + D +LV+ +DG+ +V+ E + + +P
Sbjct: 293 IGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV-NQCHDPNEA 351
Query: 664 SKRLATEAAERGSKDNITVIVV 685
+ + +A + G++DN T +VV
Sbjct: 352 AHAVTEQAIQYGTEDNSTAVVV 373
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 62/298 (20%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSE-------ELDNFHKELQLLCKLDHPGLA 124
I +G +V++ L D VA+K IL SE + F +E+ ++ L+HP +
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 125 KFVAAHAKPPNYMFFF----EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
K PP + F + Y L +K H +WS + +L IA ++Y+ N
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLY--HRLLDKAHPIKWSVKLRLMLDIAL----GIEYMQN 140
Query: 181 LG--IVHRDVKPANVLL---DRN--LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
IVHRD++ N+ L D N +C +ADF L++ +++ +S
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVS-------------- 184
Query: 234 HKKNMVGTLIYMAPEIL--KKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
++G +MAPE + ++E ++EK+D YSF + + +LTG P+
Sbjct: 185 ---GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------------ 229
Query: 292 EMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALEL 349
E +Y + + + GLRP + P + ++I+ CW G+P RP FS I EL
Sbjct: 230 EYSYGKIKFINMIREEGLRPTIPE---DCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 37/278 (13%)
Query: 68 YTLLSPIARGAESVVY--EATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHPG 122
Y ++ + G S VY E T+ KVA+K P E L F +E+ +L H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHNL 181
+ + + Y E+ E L+E ++E P SVD + Q+ +++ H++
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSE--YIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+KP N+L+D N + DFG+A+ L E SL +++GT
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKA---LSETSLTQTN------------HVLGT 175
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ Y +PE K E E +D+YS GI + E+L G P+ T + + Q +
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF-------NGETAVSIAIKHIQDS 228
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
V+ +R +P S+ ++I R + + NR
Sbjct: 229 VPNVTTDVRK-------DIPQSLSNVILRATEKDKANR 259
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 21/262 (8%)
Query: 432 GSFATCGRRETMEDTHFLMPHMYNQKEIHMFGIFDGHRGSAAAEFSARALPGFLQNLGST 491
G + G+R+ ED F + + E+ F ++DGH G AAA+F + + +L
Sbjct: 11 GCASQIGKRKENED-RFDFAQLTD--EVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK 67
Query: 492 TRPTDALLE-AFIRTDVAFRNELDSLRKSKRVVQKDWHPGCTAIAALIVRN-RLFVANAG 549
+ + LL AF+ D AF + + + G TA AL+ L VA+ G
Sbjct: 68 EKNLETLLTLAFLEIDKAFSSHARLSADATLLTS-----GTTATVALLRDGIELVVASVG 122
Query: 550 DCRAILCRGGHPFALSRDHVASCLEERERVVSAGGNVNWQVDTWRVGPP----ALQVTRS 605
D RAILCR G P L+ DH +E+ER+ GG V W +G P L +TRS
Sbjct: 123 DSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN----SLGQPHVNGRLAMTRS 178
Query: 606 IGDDDLKPA--VXXXXXXXXXXXXXXDEYLVMASDGLWDVVSHVEAVGIIKDTVKEPGMC 663
IGD DLK + + D +LV+ +DG+ +V+ E + + +P
Sbjct: 179 IGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV-NQCHDPNEA 237
Query: 664 SKRLATEAAERGSKDNITVIVV 685
+ + +A + G++DN T +VV
Sbjct: 238 AHAVTEQAIQYGTEDNSTAVVV 259
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 61/316 (19%)
Query: 431 WGSFATCGRRETMEDTHFLMPH---------MYNQKEI---------HMFGIFDGHRGSA 472
WG+ + G R MED + PH M + + + H FG++DGH G
Sbjct: 19 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 78
Query: 473 AAEFSAR----ALPGFLQNL-----------GSTTRPTDALLEAFIRTDVAFRNELDS-- 515
A++ AL ++ + G + F+ D ++
Sbjct: 79 VADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAV 138
Query: 516 LRKSKRVVQK--DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCL 573
+ S +V++ G TA+ AL+ + + V+N GD RA+L RG LS DH
Sbjct: 139 VGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRE 198
Query: 574 EERERVVSAGGNV-NWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEY 632
+E R+ +AGG V WQ RV L ++RSIGD LKP V DE
Sbjct: 199 DEYARIENAGGKVIQWQ--GARV-FGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC 255
Query: 633 LVMASDGLWDVVSHVEAVGIIKDTV----KEPG----------------MCSKRLATEAA 672
L++ASDGLWDV+++ E I + + K+ G + L+ A
Sbjct: 256 LILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL 315
Query: 673 ERGSKDNITVIVVFLQ 688
++GSKDNI++IV+ L+
Sbjct: 316 QKGSKDNISIIVIDLK 331
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 61/316 (19%)
Query: 431 WGSFATCGRRETMEDTHFLMPH---------MYNQKEI---------HMFGIFDGHRGSA 472
WG+ + G R MED + PH M + + + H FG++DGH G
Sbjct: 29 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 88
Query: 473 AAEFSAR----ALPGFLQNL-----------GSTTRPTDALLEAFIRTDVAFRNELDS-- 515
A++ AL ++ + G + F+ D ++
Sbjct: 89 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAV 148
Query: 516 LRKSKRVVQK--DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCL 573
+ S +V++ G TA+ AL+ + + V+N GD RA+L RG LS DH
Sbjct: 149 VGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRE 208
Query: 574 EERERVVSAGGNV-NWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEY 632
+E R+ +AGG V WQ RV L ++RSIGD LKP V DE
Sbjct: 209 DEYARIENAGGKVIQWQ--GARV-FGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC 265
Query: 633 LVMASDGLWDVVSHVEAVGIIKDTV----KEPG----------------MCSKRLATEAA 672
L++ASDGLWDV+++ E I + + K+ G + L+ A
Sbjct: 266 LILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL 325
Query: 673 ERGSKDNITVIVVFLQ 688
++GSKDNI++IV+ L+
Sbjct: 326 QKGSKDNISIIVIDLK 341
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 61/316 (19%)
Query: 431 WGSFATCGRRETMEDTHFLMPH---------MYNQKEI---------HMFGIFDGHRGSA 472
WG+ + G R MED + PH M + + + H FG++DGH G
Sbjct: 22 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 81
Query: 473 AAEFSAR----ALPGFLQNL-----------GSTTRPTDALLEAFIRTDVAFRNELDS-- 515
A++ AL ++ + G + F+ D ++
Sbjct: 82 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAV 141
Query: 516 LRKSKRVVQK--DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCL 573
+ S +V++ G TA+ AL+ + + V+N GD RA+L RG LS DH
Sbjct: 142 VGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRE 201
Query: 574 EERERVVSAGGNV-NWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEY 632
+E R+ +AGG V WQ RV L ++RSIGD LKP V DE
Sbjct: 202 DEYARIENAGGKVIQWQ--GARV-FGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC 258
Query: 633 LVMASDGLWDVVSHVEAVGIIKDTV----KEPG----------------MCSKRLATEAA 672
L++ASDGLWDV+++ E I + + K+ G + L+ A
Sbjct: 259 LILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL 318
Query: 673 ERGSKDNITVIVVFLQ 688
++GSKDNI++IV+ L+
Sbjct: 319 QKGSKDNISIIVIDLK 334
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 61/316 (19%)
Query: 431 WGSFATCGRRETMEDTHFLMPH---------MYNQKEI---------HMFGIFDGHRGSA 472
WG+ + G R MED + PH M + + + H FG++DGH G
Sbjct: 20 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 79
Query: 473 AAEFSAR----ALPGFLQNL-----------GSTTRPTDALLEAFIRTDVAFRNELDS-- 515
A++ AL ++ + G + F+ D ++
Sbjct: 80 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAV 139
Query: 516 LRKSKRVVQK--DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCL 573
+ S +V++ G TA+ AL+ + + V+N GD RA+L RG LS DH
Sbjct: 140 VGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRE 199
Query: 574 EERERVVSAGGNV-NWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEY 632
+E R+ +AGG V WQ RV L ++RSIGD LKP V DE
Sbjct: 200 DEYARIENAGGKVIQWQ--GARV-FGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC 256
Query: 633 LVMASDGLWDVVSHVEAVGIIKDTV----KEPG----------------MCSKRLATEAA 672
L++ASDGLWDV+++ E I + + K+ G + L+ A
Sbjct: 257 LILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL 316
Query: 673 ERGSKDNITVIVVFLQ 688
++GSKDNI++IV+ L+
Sbjct: 317 QKGSKDNISIIVIDLK 332
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 61/316 (19%)
Query: 431 WGSFATCGRRETMEDTHFLMPH---------MYNQKEI---------HMFGIFDGHRGSA 472
WG+ + G R MED + PH M + + + H FG++DGH G
Sbjct: 16 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 75
Query: 473 AAEFSAR----ALPGFLQNL-----------GSTTRPTDALLEAFIRTDVAFRNELDS-- 515
A++ AL ++ + G + F+ D ++
Sbjct: 76 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAV 135
Query: 516 LRKSKRVVQK--DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCL 573
+ S +V++ G TA+ AL+ + + V+N GD RA+L RG LS DH
Sbjct: 136 VGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRE 195
Query: 574 EERERVVSAGGNV-NWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEY 632
+E R+ +AGG V WQ RV L ++RSIGD LKP V DE
Sbjct: 196 DEYARIENAGGKVIQWQ--GARV-FGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC 252
Query: 633 LVMASDGLWDVVSHVEAVGIIKDTV----KEPG----------------MCSKRLATEAA 672
L++ASDGLWDV+++ E I + + K+ G + L+ A
Sbjct: 253 LILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL 312
Query: 673 ERGSKDNITVIVVFLQ 688
++GSKDNI++IV+ L+
Sbjct: 313 QKGSKDNISIIVIDLK 328
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 74 IARGAESVVYEATLDGRKVAVKK---PILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAA 129
+ G VVY+ ++ VAVKK + T+EEL F +E++++ K H L + +
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVD--QVLMIAAQLAKALQYLHNLGIVHRD 187
+ + + + + +L ++L + +P + IA A + +LH +HRD
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+K AN+LLD ++DFGLA R+S K +VGT YMAP
Sbjct: 159 IKSANILLDEAFTAKISDFGLA--------------RASEKFAQTVMXSRIVGTTAYMAP 204
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQ 286
E L+ EI + KSD+YSFG+ + E++TG +P D E Q
Sbjct: 205 EALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQ 241
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 61/316 (19%)
Query: 431 WGSFATCGRRETMEDTHFLMPH---------MYNQKEI---------HMFGIFDGHRGSA 472
WG+ + G R MED + PH M + + + H FG++DGH G
Sbjct: 5 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK 64
Query: 473 AAEFSAR----ALPGFLQNL-----------GSTTRPTDALLEAFIRTDVAFRNELDS-- 515
A++ AL ++ + G + F+ D ++
Sbjct: 65 VADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAV 124
Query: 516 LRKSKRVVQK--DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCL 573
+ S +V++ G TA+ AL+ + + V+N GD RA+L RG LS DH
Sbjct: 125 VGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRE 184
Query: 574 EERERVVSAGGNV-NWQVDTWRVGPPALQVTRSIGDDDLKPAVXXXXXXXXXXXXXXDEY 632
+E R+ +AGG V WQ RV L ++RSIGD LKP V DE
Sbjct: 185 DEYARIENAGGKVIQWQ--GARV-FGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDEC 241
Query: 633 LVMASDGLWDVVSHVEAVGIIKDTV----KEPG----------------MCSKRLATEAA 672
L++ASDGLWDV+++ E I + + K+ G + L+ A
Sbjct: 242 LILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL 301
Query: 673 ERGSKDNITVIVVFLQ 688
++GSKDNI++IV+ L+
Sbjct: 302 QKGSKDNISIIVIDLK 317
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 74 IARGAESVVYEATLDGRKVAVKK---PILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAA 129
+ G VVY+ ++ VAVKK + T+EEL F +E++++ K H L + +
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVD--QVLMIAAQLAKALQYLHNLGIVHRD 187
+ + + + + +L ++L + +P + IA A + +LH +HRD
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 158
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+K AN+LLD ++DFGLA R+S K +VGT YMAP
Sbjct: 159 IKSANILLDEAFTAKISDFGLA--------------RASEKFAQTVMXXRIVGTTAYMAP 204
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQ 286
E L+ EI + KSD+YSFG+ + E++TG +P D E Q
Sbjct: 205 EALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQ 241
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 74 IARGAESVVYEATLDGRKVAVKK---PILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAA 129
+ G VVY+ ++ VAVKK + T+EEL F +E++++ K H L + +
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVD--QVLMIAAQLAKALQYLHNLGIVHRD 187
+ + + + + +L ++L + +P + IA A + +LH +HRD
Sbjct: 93 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD 152
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+K AN+LLD ++DFGLA R+S K +VGT YMAP
Sbjct: 153 IKSANILLDEAFTAKISDFGLA--------------RASEKFAQXVMXXRIVGTTAYMAP 198
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQ 286
E L+ EI + KSD+YSFG+ + E++TG +P D E Q
Sbjct: 199 EALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQ 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 36/269 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 104
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 105 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 165 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 209
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 210 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 251
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRKS 358
+CW +P RP F+++ +L +LE K+
Sbjct: 252 KCWAYDPSRRPRFTELKAQLSTILEEEKA 280
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 36/269 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 127
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 128 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 188 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 232
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 233 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 274
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRKS 358
+CW +P RP F+++ +L +LE K+
Sbjct: 275 KCWAYDPSRRPRFTELKAQLSTILEEEKA 303
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 99
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 100 FLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 160 YMED----STXXKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 205 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 246
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW +P RP F+++ +L +LE K
Sbjct: 247 KCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 99
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 100 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 160 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 205 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 246
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW +P RP F+++ +L +LE K
Sbjct: 247 KCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 99
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 100 FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 160 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 205 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 246
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW +P RP F+++ +L +LE K
Sbjct: 247 KCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 19/223 (8%)
Query: 66 SSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGL 123
S + ++ + +GA V +A LD R A+KK I T E+L E+ LL L+H +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 124 AKFVAAHAKPPNY------------MFF-FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQ 170
++ AA + N+ +F E+ E+R L + +H E + D+ + Q
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 171 LAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
+ +AL Y+H+ GI+HRD+KP N+ +D + + DFGLA + + + + S P
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA--KNVHRSLDILKLDSQNLPG 182
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIH-SEKSDVYSFGISINELL 272
+ + +GT +Y+A E+L H +EK D+YS GI E++
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 74 IARGAESVVYEATL-DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAK 132
I G VY+ L DG KVA+K+ +S+ ++ F E++ L HP L + +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 133 PPNYMFFFEFYESRNLAEKLH---VEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVK 189
+ +++ E+ NL L+ + S S +Q L I A+ L YLH I+HRDVK
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK 166
Query: 190 PANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV-GTLIYMAPE 248
N+LLD N P + DFG+++ G G H +V GTL Y+ PE
Sbjct: 167 SINILLDENFVPKITDFGISK---------------KGTELGQTHLXXVVKGTLGYIDPE 211
Query: 249 ILKKEIHSEKSDVYSFGISINELL 272
K +EKSDVYSFG+ + E+L
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 479
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ N C L DFGL+
Sbjct: 480 FLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 540 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 585 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 626
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW +P RP F+++ +L +LE K
Sbjct: 627 KCWAYDPSRRPRFTELKAQLSTILEEEK 654
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGLA E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 40/282 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 131
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
HRD+ N L+ N +ADFGL+ R T H + +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLS--------------RLMTGDTXTAHAGAKF-PIKW 176
Query: 245 MAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAA 303
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-SQVYELLEKDYRME----- 230
Query: 304 VVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 231 ------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 38/281 (13%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+ N L+ N +ADFGL+ L + P G + +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLS---------RLMTGDTYTAPAGAKF------PIKWT 180
Query: 246 APEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAV 304
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME------ 233
Query: 305 VSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 234 -----RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 38/281 (13%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+ N L+ N +ADFGL+ L + P G + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS---------RLMTGDTYTAPAGAKF------PIKWT 181
Query: 246 APEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAV 304
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME------ 234
Query: 305 VSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 235 -----RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 133
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--L 242
HRD+ N L+ N +ADFGL+ TG + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPI 176
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME--- 232
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 233 --------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 57 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 116
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 170
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 171 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 224 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 265
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 266 PKFEQIVSILDKLIRNPGSLK 286
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 74 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 133
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 187
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 188 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 240
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 241 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 282
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 283 PKFEQIVSILDKLIRNPGSLK 303
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 18/203 (8%)
Query: 74 IARGAESVVYEATL-DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAK 132
I G VY+ L DG KVA+K+ +S+ ++ F E++ L HP L + +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 133 PPNYMFFFEFYESRNLAEKLH---VEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVK 189
+ +++ E+ NL L+ + S S +Q L I A+ L YLH I+HRDVK
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK 166
Query: 190 PANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEI 249
N+LLD N P + DFG+++ L + L + GTL Y+ PE
Sbjct: 167 SINILLDENFVPKITDFGISKKGTELDQTHLXXV--------------VKGTLGYIDPEY 212
Query: 250 LKKEIHSEKSDVYSFGISINELL 272
K +EKSDVYSFG+ + E+L
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 133
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--L 242
HRD+ N L+ N +ADFGL+ TG + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPI 176
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME--- 232
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 233 --------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 140/283 (49%), Gaps = 39/283 (13%)
Query: 68 YTLLSPIARGA--ESVVYEATLDGRKVAVKKPILS--TSEELDNFHKELQLLCKLDHPGL 123
Y L I G+ ++++ ++T DGR+ +K+ +S +S+E + +E+ +L + HP +
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 124 AKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHNLG 182
++ + + + ++ E +L ++++ ++ DQ+L Q+ AL+++H+
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK 145
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL 242
I+HRD+K N+ L ++ L DFG+A + E++ + +GT
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA----------------RACIGTP 189
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
Y++PEI + + ++ KSD+++ G + EL T L+ +A ++ + L
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCT-------LKHAFEAGSM-------KNLVL 235
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
++SG P+ L + SL+ + + NP +RPS + I
Sbjct: 236 KIISGSFPPV----SLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 36/268 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 99
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ C L DFGL+
Sbjct: 100 FLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 159
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 160 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 204
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 205 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 246
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW +P RP F+++ +L +LE K
Sbjct: 247 KCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 133
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--L 242
HRD+ N L+ N +ADFGL+ TG + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPI 176
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME--- 232
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 233 --------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 40/282 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 131
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
HRD+ N L+ N +ADFGL+ R T H + +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLS--------------RLMTGDTXTAHAGAKF-PIKW 176
Query: 245 MAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAA 303
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-SQVYELLEKDYRME----- 230
Query: 304 VVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 231 ------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 84 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 197
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 198 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 250
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 251 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 292
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 293 PKFEQIVSILDKLIRNPGSLK 313
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 40/282 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 131
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
HRD+ N L+ N +ADFGL+ R T H + +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLS--------------RLMTGDTFTAHAGAKF-PIKW 176
Query: 245 MAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAA 303
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP-SQVYELLEKDYRME----- 230
Query: 304 VVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 231 ------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 138
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--L 242
HRD+ N L+ N +ADFGL+ TG + + +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPI 181
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME--- 237
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 238 --------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E+ E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 75 ARGAESVVYEATLDGRKVAVKK---PILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAH 130
G VVY+ ++ VAVKK + T+EEL F +E+++ K H L + +
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 131 AKPPNYMFFFEFYESRNLAEKLHVEEWSPSVD--QVLMIAAQLAKALQYLHNLGIVHRDV 188
+ + + + + +L ++L + +P + IA A + +LH +HRD+
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDI 150
Query: 189 KPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPE 248
K AN+LLD ++DFGLA R+S K +VGT Y APE
Sbjct: 151 KSANILLDEAFTAKISDFGLA--------------RASEKFAQXVXXSRIVGTTAYXAPE 196
Query: 249 ILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQ 286
L+ EI + KSD+YSFG+ + E++TG +P D E Q
Sbjct: 197 ALRGEI-TPKSDIYSFGVVLLEIITG-LPAVDEHREPQ 232
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 44/284 (15%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 133
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--L 242
HRD+ N L+ N +ADFGL+ TG + + +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPI 176
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME--- 232
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 233 --------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+ N L+ N +ADFGL+ R T H + +
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLS--------------RLMTGDTXTAHAGAKF-PIKWT 180
Query: 246 APEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAV 304
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME------ 233
Query: 305 VSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 234 -----RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 19/223 (8%)
Query: 66 SSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGL 123
S + ++ + +GA V +A LD R A+KK I T E+L E+ LL L+H +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 124 AKFVAAHAKPPNY------------MFF-FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQ 170
++ AA + N+ +F E+ E+ L + +H E + D+ + Q
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 171 LAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
+ +AL Y+H+ GI+HRD+KP N+ +D + + DFGLA + + + + S P
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA--KNVHRSLDILKLDSQNLPG 182
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIH-SEKSDVYSFGISINELL 272
+ + +GT +Y+A E+L H +EK D+YS GI E++
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 48/305 (15%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDH 120
+ L TLL + G VV G+ K I S D F +E Q + KL H
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSH 62
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL--HVEEWSPSVDQVLMIAAQLAKALQYL 178
P L KF +K E+ + L L H + PS Q+L + + + + +L
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS--QLLEMCYDVCEGMAFL 120
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
+ +HRD+ N L+DR+LC ++DFG+ Y + + +S
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS------------------S 162
Query: 239 VGT---LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMN 294
VGT + + APE+ +S KSDV++FGI + E+ + G +PY DL
Sbjct: 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY-DL------------- 208
Query: 295 YTEQQLTAAVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
YT ++ V G RP LAS +I ++ CW P RP+F + ++ +
Sbjct: 209 YTNSEVVLKVSQGHRLYRPHLAS------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
Query: 353 LEHRK 357
E K
Sbjct: 263 REKDK 267
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T + +F E ++ + DHP + + + M E+ E+ +L L + +
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
+ Q++ + + ++YL +LG VHRD+ NVL+D NL ++DFGL+ E+
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED------ 203
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + APE + S SDV+SFG+ + E+L G PY
Sbjct: 204 -------DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY- 255
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
N T + + ++V G P +G P ++ L+ CW + R
Sbjct: 256 -------------WNMTNRDVISSVEEGYRLPA----PMGCPHALHQLMLDCWHKDRAQR 298
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P FS I LD ++ +SL+
Sbjct: 299 PRFSQIVSVLDALIRSPESLR 319
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 182
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 237
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 238 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 36/268 (13%)
Query: 92 VAVKKPILSTSEEL-DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VA+K TS+ + + F +E + + DHP + K + + P ++ E L
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRS 479
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
L V ++S + +++ A QL+ AL YL + VHRD+ NVL+ C L DFGL+
Sbjct: 480 FLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 539
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
Y E+ S S GK + +MAPE + + SDV+ FG+ + E
Sbjct: 540 YMED----STYYKASKGKL-----------PIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+L GV P+ ++ + + +G P+ + P ++ SL+
Sbjct: 585 ILMHGVKPFQGVK--------------NNDVIGRIENGERLPMPPN----CPPTLYSLMT 626
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW +P RP F+++ +L +LE K
Sbjct: 627 KCWAYDPSRRPRFTELKAQLSTILEEEK 654
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E E+ +L L + +
Sbjct: 57 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 116
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 170
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 171 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 224 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 265
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 266 PKFEQIVSILDKLIRNPGSLK 286
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 22/268 (8%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKP--PNYMFFFEFYESR 146
G VAVK+ S ++ +F +E+Q+L L + K+ P P E+ S
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
L + L ++L+ ++Q+ K ++YL + VHRD+ N+L++ +ADF
Sbjct: 96 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 155
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GLA+ K+ + R G+ + + APE L I S +SDV+SFG+
Sbjct: 156 GLAKLLPLDKDXXVV--REPGQ-----------SPIFWYAPESLSDNIFSRQSDVWSFGV 202
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLEL--GLPASI 324
+ EL T Y D A L M E+ + A L L PA +
Sbjct: 203 VLYELFT----YCDKSCSPSAE-FLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEV 257
Query: 325 LSLIQRCWDGNPHNRPSFSDIALELDLV 352
L++ CW +P +RPSFS + +LD++
Sbjct: 258 HELMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+ N L+ N +ADFGL+ R T H + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS--------------RLMTGDTXTAHAGAKF-PIKWT 184
Query: 246 APEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAV 304
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME------ 237
Query: 305 VSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 238 -----RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 182
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 237
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 238 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 177
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 232
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 233 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T + +F E ++ + DHP + + + M E+ E+ +L L + +
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFT 149
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
+ Q++ + + ++YL +LG VHRD+ NVL+D NL ++DFGL+ E+ + +
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
TGG + + APE + S SDV+SFG+ + E+L G PY
Sbjct: 210 TT-------TGGKIP------IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY- 255
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
N T + + ++V G P +G P ++ L+ CW + R
Sbjct: 256 -------------WNMTNRDVISSVEEGYRLPA----PMGCPHALHQLMLDCWHKDRAQR 298
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P FS I LD ++ +SL+
Sbjct: 299 PRFSQIVSVLDALIRSPESLR 319
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 179
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 234
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 235 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 179
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 234
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 235 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 190
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 245
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 246 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 182
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 237
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 238 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+ N L+ N +ADFGL+ R T H + +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS--------------RLMTGDTYTAHAGAKF-PIKWT 179
Query: 246 APEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAV 304
APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME------ 232
Query: 305 VSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 233 -----RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + + K M E E+ +L L + +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 199
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + +PE + + SDV+S+GI + E+++ G PY
Sbjct: 200 -------DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ + Q + AV G P + PA++ L+ CW + +NR
Sbjct: 253 EM--------------SNQDVIKAVDEGYRLP----PPMDCPAALYQLMLDCWQKDRNNR 294
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 295 PKFEQIVSILDKLIRNPGSLK 315
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
RD+ N L+ N +ADFGL+ TG + + +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 181
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 236
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP G P + L++ CW NP +RPSF++I
Sbjct: 237 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 22/221 (9%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P + +L + G+ VY+A G+ VA+K+ + +L KE+ ++ + D P
Sbjct: 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQ--VPVESDLQEIIKEISIMQQCDSP 84
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K+ ++ K + E+ + ++++ + + + + D++ I K L+YLH +
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKN-MVG 240
+HRD+K N+LL+ LADFG+A G+ T K+N ++G
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVA-----------------GQLTDXMAKRNXVIG 187
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
T +MAPE++++ ++ +D++S GI+ E+ G PY D+
Sbjct: 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 134/307 (43%), Gaps = 44/307 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ P + EF NL + L + +E S V +L +A Q++ A++YL +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV--LLYMATQISSAMEYLEKKNFI 340
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--L 242
HR++ N L+ N +ADFGL+ TG + + +
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPI 383
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME--- 439
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKE 361
RP G P + L++ CW NP +RPSF++I + + + E
Sbjct: 440 --------RP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 485
Query: 362 EDLCAGK 368
+ GK
Sbjct: 486 VEKELGK 492
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 43/297 (14%)
Query: 74 IARGAESVVYEATL---DGRKVAVKKPILSTSEELDN---FHKELQLLCKLDHPGLAKFV 127
+ G VYE G K+ V LDN F E ++ LDHP + K +
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ P ++ E Y L L + S V +++ + Q+ KA+ YL ++ VHRD
Sbjct: 92 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 150
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI-YMA 246
+ N+L+ C L DFGL+ Y E+ ++K ++ I +M+
Sbjct: 151 IAVRNILVASPECVKLGDFGLSRYIED----------------EDYYKASVTRLPIKWMS 194
Query: 247 PEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVV 305
PE + + SDV+ F + + E+L+ G P+ + E + V+
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFF---------------WLENKDVIGVL 239
Query: 306 SGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEE 362
G R L +L P + +L+ RCWD +P +RP F+++ L V + K + E
Sbjct: 240 EKGDR--LPKPDL-CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 293
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 43/297 (14%)
Query: 74 IARGAESVVYEATL---DGRKVAVKKPILSTSEELDN---FHKELQLLCKLDHPGLAKFV 127
+ G VYE G K+ V LDN F E ++ LDHP + K +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ P ++ E Y L L + S V +++ + Q+ KA+ YL ++ VHRD
Sbjct: 80 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 138
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI-YMA 246
+ N+L+ C L DFGL+ Y E+ ++K ++ I +M+
Sbjct: 139 IAVRNILVASPECVKLGDFGLSRYIED----------------EDYYKASVTRLPIKWMS 182
Query: 247 PEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVV 305
PE + + SDV+ F + + E+L+ G P+ + E + V+
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFF---------------WLENKDVIGVL 227
Query: 306 SGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEE 362
G R L +L P + +L+ RCWD +P +RP F+++ L V + K + E
Sbjct: 228 EKGDR--LPKPDL-CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 281
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 19/217 (8%)
Query: 66 SSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGL 123
S + ++ + +GA V +A LD R A+KK I T E+L E+ LL L+H +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 124 AKFVAAHAKPPNYM-----------FFF--EFYESRNLAEKLHVEEWSPSVDQVLMIAAQ 170
++ AA + N++ F E+ E+R L + +H E + D+ + Q
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 171 LAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
+ +AL Y+H+ GI+HR++KP N+ +D + + DFGLA + + + + S P
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA--KNVHRSLDILKLDSQNLPG 182
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIH-SEKSDVYSFGI 266
+ + +GT Y+A E+L H +EK D YS GI
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGI 219
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 31/273 (11%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESR 146
G VAVKK ST E L +F +E+++L L H + K+ V A N EF
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
+L E L + ++L +Q+ K ++YL +HRD+ N+L++ + DF
Sbjct: 102 SLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GL + KE + G+ + + APE L + S SDV+SFG+
Sbjct: 162 GLTKVLPQDKEXX--KVKEPGE-----------SPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELG 319
+ EL T + ++++ + M ++Q L + + G P G
Sbjct: 209 VLYELFTYIE-----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----G 259
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
P I ++ CW+ N + RPSF D+AL +D +
Sbjct: 260 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 43/297 (14%)
Query: 74 IARGAESVVYEATL---DGRKVAVKKPILSTSEELDN---FHKELQLLCKLDHPGLAKFV 127
+ G VYE G K+ V LDN F E ++ LDHP + K +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ P ++ E Y L L + S V +++ + Q+ KA+ YL ++ VHRD
Sbjct: 76 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 134
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI-YMA 246
+ N+L+ C L DFGL+ Y E+ ++K ++ I +M+
Sbjct: 135 IAVRNILVASPECVKLGDFGLSRYIED----------------EDYYKASVTRLPIKWMS 178
Query: 247 PEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVV 305
PE + + SDV+ F + + E+L+ G P+ + E + V+
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFF---------------WLENKDVIGVL 223
Query: 306 SGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEE 362
G R L +L P + +L+ RCWD +P +RP F+++ L V + K + E
Sbjct: 224 EKGDR--LPKPDL-CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 277
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 41/305 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEATL---DGRK---VAVK--KPILSTSEELDNFHKELQLLC 116
PS T I G VY+ L G+K VA+K K + + +D F E ++
Sbjct: 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMG 101
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ H + + +K M E+ E+ L + L ++ SV Q++ + +A ++
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
YL N+ VHRD+ N+L++ NL ++DFGL+ E+ E + S GK
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT--SGGKI------- 212
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ + APE + + SDV+SFGI + E++T G PY +L H V++
Sbjct: 213 ----PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL----SNHEVMK--- 261
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEH 355
++ G R + P++I L+ +CW RP F+DI LD ++
Sbjct: 262 --------AINDGFR---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
Query: 356 RKSLK 360
SLK
Sbjct: 311 PDSLK 315
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 23/228 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPGLA 124
+ L+ + GA V A + AV I+ +D N KE+ + L+H +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 125 KFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
KF H + N + F E+ L +++ + P D QL + YLH +GI
Sbjct: 69 KFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGIGI 126
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVGTL 242
HRD+KP N+LLD ++DFGLA +R N +E L M GTL
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCGTL 171
Query: 243 IYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 23/228 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPGLA 124
+ L+ + GA V A + AV I+ +D N KE+ + L+H +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 125 KFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
KF H + N + F E+ L +++ + P D QL + YLH +GI
Sbjct: 68 KFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGIGI 125
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVGTL 242
HRD+KP N+LLD ++DFGLA +R N +E L M GTL
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCGTL 170
Query: 243 IYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 124
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 169
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 65 PSSYTLLSPIARGAESVVYEATL----DGRKV----AVKKPILSTSEELDNFHKELQLLC 116
PS + LL + +G+ V+ D R++ +KK L + + E +L
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILV 81
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+++HP + K A +F +L +L E D V A+LA AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALALD 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+LGI++RD+KP N+LLD L DFGL+ +E++ H+K
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS--KESID-----------------HEK 181
Query: 237 ---NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
+ GT+ YMAPE++ + H++ +D +SFG+ + E+LTG +P+
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 65 PSSYTLLSPIARGAESVVYEATL----DGRKV----AVKKPILSTSEELDNFHKELQLLC 116
PS + LL + +G+ V+ D R++ +KK L + + E +L
Sbjct: 24 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILV 82
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+++HP + K A +F +L +L E D V A+LA AL
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALALD 141
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+LGI++RD+KP N+LLD L DFGL+ +E++ H+K
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS--KESID-----------------HEK 182
Query: 237 ---NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
+ GT+ YMAPE++ + H++ +D +SFG+ + E+LTG +P+
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 42/292 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
R++ N L+ N +ADFGL+ TG + + +
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 381
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 436
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
RP G P + L++ CW NP +RPSF++I + + +
Sbjct: 437 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 475
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 124
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 169
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 124
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 169
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 124
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 169
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 131/312 (41%), Gaps = 41/312 (13%)
Query: 58 SIPLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKE 111
S P L + +G E Y+ D G VAVKK ST E L +F +E
Sbjct: 2 SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 112 LQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAA 169
+++L L H + K+ V A N E+ +L + L + ++L +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
Q+ K ++YL +HRD+ N+L++ + DFGL + KE
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE------------ 169
Query: 230 TGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQA 287
F K G + + APE L + S SDV+SFG+ + EL T + ++++
Sbjct: 170 ---FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPP 221
Query: 288 HTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRP 340
+ M ++Q L + + G P G P I ++ CW+ N + RP
Sbjct: 222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRP 277
Query: 341 SFSDIALELDLV 352
SF D+AL +D +
Sbjct: 278 SFRDLALRVDQI 289
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 65 PSSYTLLSPIARGAESVVYEATL----DGRKV----AVKKPILSTSEELDNFHKELQLLC 116
PS + LL + +G+ V+ D R++ +KK L + + E +L
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILV 81
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+++HP + K A +F +L +L E D V A+LA AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALALD 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+LGI++RD+KP N+LLD L DFGL+ +E++ H+K
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS--KESID-----------------HEK 181
Query: 237 ---NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
+ GT+ YMAPE++ + H++ +D +SFG+ + E+LTG +P+
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 42/292 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
T+ + G VYE + V K + + E++ F KE ++ ++ HP L + +
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLHNLGIVH 185
+ P + EF NL + L E V+ V L +A Q++ A++YL +H
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LI 243
R++ N L+ N +ADFGL+ TG + + +
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM-----------------TGDTYTAHAGAKFPIK 423
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+ APE L S KSDV++FG+ + E+ T G+ PY + +Q + +LE +Y +
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRME---- 478
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
RP G P + L++ CW NP +RPSF++I + + +
Sbjct: 479 -------RP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 517
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 19/266 (7%)
Query: 91 KVAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLA 149
+V V K ++ EE F KE++++ L+HP + KF+ K F E+ + L
Sbjct: 36 EVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR 95
Query: 150 EKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLA 209
+ + Q + A +A + YLH++ I+HRD+ N L+ N +ADFGLA
Sbjct: 96 GIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Query: 210 EYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISIN 269
+ K + RS KP + +VG +MAPE++ + EK DV+SFGI +
Sbjct: 156 RLMVDEK-TQPEGLRSLKKPDRK-KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLC 213
Query: 270 ELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
E++ R A +Y + + + G + P S +
Sbjct: 214 EIIG--------RVNADP------DYLPRTMDFGLNVRGF--LDRYCPPNCPPSFFPITV 257
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEH 355
RC D +P RPSF + L+ + H
Sbjct: 258 RCCDLDPEKRPSFVKLEHWLETLRMH 283
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMXG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 124
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMXG 169
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 40/301 (13%)
Query: 58 SIPLHLPPSSYTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLC 116
S+ + + PS T + I G +V+ L+ KVA+K I S D+F +E +++
Sbjct: 19 SLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT-IKEGSMSEDDFIEEAEVMM 77
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
KL HP L + + FEF E L++ L + + + +L + + + +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
YL ++HRD+ N L+ N ++DFG+ + L + +S T F K
Sbjct: 138 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGT-KFPVK 189
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ +PE+ +S KSDV+SFG+ + E+ + G +PY N
Sbjct: 190 -------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--------------NR 228
Query: 296 TEQQLTAAVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVL 353
+ ++ + +G +P LAS + ++ CW P +RP+FS + +L +
Sbjct: 229 SNSEVVEDISTGFRLYKPRLAS------THVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 282
Query: 354 E 354
E
Sbjct: 283 E 283
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 65 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 122
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 167
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 124
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 169
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMXG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 124
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMCG 169
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 131/313 (41%), Gaps = 37/313 (11%)
Query: 55 SSQSIPLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNF 108
S P L + +G E Y+ D G VAVKK ST E L +F
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 109 HKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
+E+++L L H + K+ V A N E+ +L + L + ++L
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSS 226
+Q+ K ++YL +HRD+ N+L++ + DFGL + KE +
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEP 179
Query: 227 GKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQ 286
G+ + + APE L + S SDV+SFG+ + EL T + ++++
Sbjct: 180 GE-----------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSP 223
Query: 287 AHTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
+ M ++Q L + + G P G P I ++ CW+ N + R
Sbjct: 224 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQR 279
Query: 340 PSFSDIALELDLV 352
PSF D+AL +D +
Sbjct: 280 PSFRDLALRVDQI 292
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 131/310 (42%), Gaps = 37/310 (11%)
Query: 58 SIPLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKE 111
S P L + +G E Y+ D G VAVKK ST E L +F +E
Sbjct: 2 SDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 61
Query: 112 LQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAA 169
+++L L H + K+ V A N E+ +L + L + ++L +
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
Q+ K ++YL +HRD+ N+L++ + DFGL + KE + G+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEPGE- 178
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
+ + APE L + S SDV+SFG+ + EL T + ++++
Sbjct: 179 ----------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAE 223
Query: 290 VLEMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ M ++Q L + + G P G P I ++ CW+ N + RPSF
Sbjct: 224 FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSF 279
Query: 343 SDIALELDLV 352
D+AL +D +
Sbjct: 280 RDLALRVDQI 289
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 22/234 (9%)
Query: 56 SQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGRK--VAVKKPILSTSE-ELDNFHKEL 112
S ++P + Y L I GA +VV A +K VA+K+ L + +D KE+
Sbjct: 5 SSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEI 64
Query: 113 QLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL-HV----EEWSPSVDQ--VL 165
Q + + HP + + + + ++ + + H+ E S +D+ +
Sbjct: 65 QAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 124
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRS 225
I ++ + L+YLH G +HRDVK N+LL + +ADFG++ + +I+ R
Sbjct: 125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR- 183
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKK-EIHSEKSDVYSFGISINELLTGVVPY 278
K VGT +MAPE++++ + K+D++SFGI+ EL TG PY
Sbjct: 184 ----------KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 60 PLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQ 113
P L + +G E Y+ D G VAVKK ST E L +F +E++
Sbjct: 9 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 68
Query: 114 LLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
+L L H + K+ V A N E+ +L + L + ++L +Q+
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
K ++YL +HRD+ N+L++ + DFGL + KE + G+
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEPGE--- 183
Query: 232 GFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
+ + APE L + S SDV+SFG+ + EL T + ++++ +
Sbjct: 184 --------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAEFM 230
Query: 292 EMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
M ++Q L + + G P G P I ++ CW+ N + RPSF D
Sbjct: 231 RMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 286
Query: 345 IALELDLV 352
+AL +D +
Sbjct: 287 LALRVDQI 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 31/280 (11%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESR 146
G VAVKK ST E L +F +E+++L L H + K+ V A N E+
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
+L + L + ++L +Q+ K ++YL +HRD+ N+L++ + DF
Sbjct: 103 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 162
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GL + KE + G+ + + APE L + S SDV+SFG+
Sbjct: 163 GLTKVLPQDKEXX--KVKEPGE-----------SPIFWYAPESLTESKFSVASDVWSFGV 209
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELG 319
+ EL T + ++++ + M ++Q L + + G P G
Sbjct: 210 VLYELFTYIE-----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----G 260
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSL 359
P I ++ CW+ N + RPSF D+AL +D + ++ L
Sbjct: 261 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGL 300
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 60 PLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQ 113
P L + +G E Y+ D G VAVKK ST E L +F +E++
Sbjct: 11 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 70
Query: 114 LLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
+L L H + K+ V A N E+ +L + L + ++L +Q+
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
K ++YL +HRD+ N+L++ + DFGL + KE + G+
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEPGE--- 185
Query: 232 GFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
+ + APE L + S SDV+SFG+ + EL T + ++++ +
Sbjct: 186 --------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAEFM 232
Query: 292 EMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
M ++Q L + + G P G P I ++ CW+ N + RPSF D
Sbjct: 233 RMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 288
Query: 345 IALELDLV 352
+AL +D +
Sbjct: 289 LALRVDQI 296
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMXG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 60 PLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQ 113
P L + +G E Y+ D G VAVKK ST E L +F +E++
Sbjct: 10 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 69
Query: 114 LLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
+L L H + K+ V A N E+ +L + L + ++L +Q+
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
K ++YL +HRD+ N+L++ + DFGL + KE + G+
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEPGE--- 184
Query: 232 GFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
+ + APE L + S SDV+SFG+ + EL T + ++++ +
Sbjct: 185 --------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAEFM 231
Query: 292 EMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
M ++Q L + + G P G P I ++ CW+ N + RPSF D
Sbjct: 232 RMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 287
Query: 345 IALELDLV 352
+AL +D +
Sbjct: 288 LALRVDQI 295
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 22/268 (8%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKP--PNYMFFFEFYESR 146
G VAVK+ S ++ +F +E+Q+L L + K+ P + E+ S
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
L + L ++L+ ++Q+ K ++YL + VHRD+ N+L++ +ADF
Sbjct: 100 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 159
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GLA+ K+ + R G+ + + APE L I S +SDV+SFG+
Sbjct: 160 GLAKLLPLDKDYYVV--REPGQ-----------SPIFWYAPESLSDNIFSRQSDVWSFGV 206
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLEL--GLPASI 324
+ EL T Y D A L M E+ + A L L PA +
Sbjct: 207 VLYELFT----YCDKSCSPSAE-FLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEV 261
Query: 325 LSLIQRCWDGNPHNRPSFSDIALELDLV 352
L++ CW +P +RPSFS + +LD++
Sbjct: 262 HELMKLCWAPSPQDRPSFSALGPQLDML 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 31/273 (11%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESR 146
G VAVKK ST E L +F +E+++L L H + K+ V A N E+
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
+L + L + ++L +Q+ K ++YL +HRD+ N+L++ + DF
Sbjct: 130 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 189
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GL + KE + G+ + + APE L + S SDV+SFG+
Sbjct: 190 GLTKVLPQDKEXX--KVKEPGE-----------SPIFWYAPESLTESKFSVASDVWSFGV 236
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELG 319
+ EL T + ++++ + M ++Q L + + G P G
Sbjct: 237 VLYELFTYIE-----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----G 287
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
P I ++ CW+ N + RPSF D+AL +D +
Sbjct: 288 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 60 PLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQ 113
P L + +G E Y+ D G VAVKK ST E L +F +E++
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 114 LLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
+L L H + K+ V A N E+ +L + L + ++L +Q+
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
K ++YL +HRD+ N+L++ + DFGL + KE + G+
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEPGE--- 178
Query: 232 GFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
+ + APE L + S SDV+SFG+ + EL T + ++++ +
Sbjct: 179 --------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAEFM 225
Query: 292 EMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
M ++Q L + + G P G P I ++ CW+ N + RPSF D
Sbjct: 226 RMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 345 IALELDLV 352
+AL +D +
Sbjct: 282 LALRVDQI 289
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 60 PLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQ 113
P L + +G E Y+ D G VAVKK ST E L +F +E++
Sbjct: 2 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 61
Query: 114 LLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
+L L H + K+ V A N E+ +L + L + ++L +Q+
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
K ++YL +HRD+ N+L++ + DFGL + KE + G+
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEPGE--- 176
Query: 232 GFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
+ + APE L + S SDV+SFG+ + EL T + ++++ +
Sbjct: 177 --------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAEFM 223
Query: 292 EMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
M ++Q L + + G P G P I ++ CW+ N + RPSF D
Sbjct: 224 RMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 279
Query: 345 IALELDLV 352
+AL +D +
Sbjct: 280 LALRVDQI 287
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD---NFHKELQLLCKLDHPG 122
+ L+ + GA V A + AV I+ +D N KE+ + L+H
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 123 LAKFVAAHAKPPNYMFFF-EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ KF H + N + F E+ L +++ + P D QL + YLH +
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH-QLMAGVVYLHGI 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
GI HRD+KP N+LLD ++DFGLA +R N +E L M G
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL---------------NKMXG 168
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
TL Y+APE+LK +E H+E DV+S GI + +L G +P+ Q ++
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS 218
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAE--------XTAREGAKFPIK 175
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 176 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 227
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 228 RM-----------VRPD------NCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 60 PLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQ 113
P L + +G E Y+ D G VAVKK ST E L +F +E++
Sbjct: 3 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 62
Query: 114 LLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
+L L H + K+ V A N E+ +L + L + ++L +Q+
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
K ++YL +HRD+ N+L++ + DFGL + KE + G+
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX--KVKEPGE--- 177
Query: 232 GFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVL 291
+ + APE L + S SDV+SFG+ + EL T + ++++ +
Sbjct: 178 --------SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAEFM 224
Query: 292 EMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
M ++Q L + + G P G P I ++ CW+ N + RPSF D
Sbjct: 225 RMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRD 280
Query: 345 IALELDLV 352
+AL +D +
Sbjct: 281 LALRVDQI 288
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 22/268 (8%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKP--PNYMFFFEFYESR 146
G VAVK+ S ++ +F +E+Q+L L + K+ P + E+ S
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
L + L ++L+ ++Q+ K ++YL + VHRD+ N+L++ +ADF
Sbjct: 99 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 158
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GLA+ K+ + R G+ + + APE L I S +SDV+SFG+
Sbjct: 159 GLAKLLPLDKDYYVV--REPGQ-----------SPIFWYAPESLSDNIFSRQSDVWSFGV 205
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLEL--GLPASI 324
+ EL T Y D A L M +E+ + A L L PA +
Sbjct: 206 VLYELFT----YCDKSCSPSAE-FLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEV 260
Query: 325 LSLIQRCWDGNPHNRPSFSDIALELDLV 352
L++ CW +P +RPSFS + +LD++
Sbjct: 261 HELMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 31/273 (11%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESR 146
G VAVKK ST E L +F +E+++L L H + K+ V A N E+
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
+L + L ++L +Q+ K ++YL +HRD+ N+L++ + DF
Sbjct: 102 SLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GL + KE + G+ + + APE L + S SDV+SFG+
Sbjct: 162 GLTKVLPQDKEXX--KVKEPGE-----------SPIFWYAPESLTESKFSVASDVWSFGV 208
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELG 319
+ EL T + ++++ + M ++Q L + + G P G
Sbjct: 209 VLYELFTYIE-----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----G 259
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
P I ++ CW+ N + RPSF D+AL +D +
Sbjct: 260 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 31/273 (11%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESR 146
G VAVKK ST E L +F +E+++L L H + K+ V A N E+
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
+L + L + ++L +Q+ K ++YL +HRD+ N+L++ + DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GL + KE + G+ + + APE L + S SDV+SFG+
Sbjct: 177 GLTKVLPQDKEXX--KVKEPGE-----------SPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELG 319
+ EL T + ++++ + M ++Q L + + G P G
Sbjct: 224 VLYELFTYIE-----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----G 274
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
P I ++ CW+ N + RPSF D+AL +D +
Sbjct: 275 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 31/273 (11%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESR 146
G VAVKK ST E L +F +E+++L L H + K+ V A N E+
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
+L + L + ++L +Q+ K ++YL +HRD+ N+L++ + DF
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GL + KE + G+ + + APE L + S SDV+SFG+
Sbjct: 177 GLTKVLPQDKEXX--KVKEPGE-----------SPIFWYAPESLTESKFSVASDVWSFGV 223
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQ-------LTAAVVSGGLRPILASLELG 319
+ EL T + ++++ + M ++Q L + + G P G
Sbjct: 224 VLYELFTYIE-----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----G 274
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
P I ++ CW+ N + RPSF D+AL +D +
Sbjct: 275 CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 22/268 (8%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKP--PNYMFFFEFYESR 146
G VAVK+ S ++ +F +E+Q+L L + K+ P + E+ S
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
L + L ++L+ ++Q+ K ++YL + VHRD+ N+L++ +ADF
Sbjct: 112 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 171
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GLA+ K+ + R G+ + + APE L I S +SDV+SFG+
Sbjct: 172 GLAKLLPLDKDYYVV--REPGQ-----------SPIFWYAPESLSDNIFSRQSDVWSFGV 218
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLEL--GLPASI 324
+ EL T Y D A L M E+ + A L L PA +
Sbjct: 219 VLYELFT----YCDKSCSPSAE-FLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEV 273
Query: 325 LSLIQRCWDGNPHNRPSFSDIALELDLV 352
L++ CW +P +RPSFS + +LD++
Sbjct: 274 HELMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 22/232 (9%)
Query: 58 SIPLHLPPSSYTLLSPIARGAESVVYEATLDGRK--VAVKKPILSTSE-ELDNFHKELQL 114
++P + Y L I GA +VV A +K VA+K+ L + +D KE+Q
Sbjct: 2 ALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQA 61
Query: 115 LCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL-HV----EEWSPSVDQ--VLMI 167
+ + HP + + + + ++ + + H+ E S +D+ + I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
++ + L+YLH G +HRDVK N+LL + +ADFG++ + +I+ R
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR--- 178
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKK-EIHSEKSDVYSFGISINELLTGVVPY 278
K VGT +MAPE++++ + K+D++SFGI+ EL TG PY
Sbjct: 179 --------KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 34/263 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + K M EF E+ +L L + +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++ VHRD+ N+L++ NL ++DFGL+ + E+
Sbjct: 134 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED------ 187
Query: 221 KNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+ PT + + G + + APE ++ + SDV+S+GI + E+++ G P
Sbjct: 188 ----DTSDPT---YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y D+ T Q + A+ P + P+++ L+ CW + +
Sbjct: 241 YWDM--------------TNQDVINAIEQDYRLP----PPMDCPSALHQLMLDCWQKDRN 282
Query: 338 NRPSFSDIALELDLVLEHRKSLK 360
+RP F I LD ++ + SLK
Sbjct: 283 HRPKFGQIVNTLDKMIRNPNSLK 305
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 41/310 (13%)
Query: 60 PLHLPPSSYTLLSPIARG----AESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQ 113
P L + +G E Y+ D G VAVKK ST E L +F +E++
Sbjct: 5 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 64
Query: 114 LLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
+L L H + K+ V A N E+ +L + L + ++L +Q+
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
K ++YL +HR++ N+L++ + DFGL + KE
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE-------------- 170
Query: 232 GFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
++K G + + APE L + S SDV+SFG+ + EL T + ++++
Sbjct: 171 -YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE-----KSKSPPAE 224
Query: 290 VLEMNYTEQQ-------LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ M ++Q L + + G P G P I ++ CW+ N + RPSF
Sbjct: 225 FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSF 280
Query: 343 SDIALELDLV 352
D+AL +D +
Sbjct: 281 RDLALRVDQI 290
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 50/327 (15%)
Query: 52 GCCSSQSIPL--------------HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKP 97
G C S+P +P S L + G V+ AT + K
Sbjct: 160 GLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT 219
Query: 98 ILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEW 157
+ S ++ F E ++ L H L K A K P Y+ EF +L + L +E
Sbjct: 220 MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEG 278
Query: 158 SPS-VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S + +++ +AQ+A+ + ++ +HRD++ AN+L+ +L +ADFGLA E+ +
Sbjct: 279 SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+ + F K + APE + + KSDV+SFGI + E++T G
Sbjct: 339 --------YTAREGAKFPIK-------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGN 335
+PY + + + LE Y RP P + +++ RCW
Sbjct: 384 IPYPGM-SNPEVIRALERGYRMP-----------RP------ENCPEELYNIMMRCWKNR 425
Query: 336 PHNRPSFSDIALELDLVLEHRKSLKEE 362
P RP+F I LD +S EE
Sbjct: 426 PEERPTFEYIQSVLDDFYTATESQXEE 452
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 70 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 124
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 125 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------XTAREGAKFPIK 176
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 177 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 228
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 229 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 258
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------XTAREGAKFPIK 175
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 176 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 227
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 228 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 71 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 125
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 126 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------XTAREGAKFPIK 177
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 178 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 229
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 230 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFS 343
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------YTAREGAKFPIK 175
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 176 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 227
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 228 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 257
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------XTAREGAKFPIK 175
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 176 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 227
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 228 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 32/256 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + K M E+ E+ +L L + +
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + ++ ++YL ++G VHRD+ N+L++ NL ++DFGL+ E+
Sbjct: 123 VIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED------ 176
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + APE + + SDV+S+GI + E+++ G PY
Sbjct: 177 -------DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYW 229
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
++ T Q + AV G P + PA++ L+ CW ++R
Sbjct: 230 EM--------------TNQDVIKAVEEGYRLP----SPMDCPAALYQLMLDCWQKERNSR 271
Query: 340 PSFSDIALELDLVLEH 355
P F +I LD ++ +
Sbjct: 272 PKFDEIVNMLDKLIRN 287
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 74 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 128
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 129 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------YTAREGAKFPIK 180
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 181 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 232
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 233 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 262
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
+KK ++T+ E+ +L +LDHP + K NY E Y L +++
Sbjct: 37 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII 96
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD---RNLCPHLADFGLAE 210
+ + VD + I Q+ YLH IVHRD+KP N+LL+ R+ + DFGL+
Sbjct: 97 LRQKFSEVDAAV-IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 155
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+ E GG K+ + GT Y+APE+L+K+ + EK DV+S G+ +
Sbjct: 156 HFE----------------VGGKMKERL-GTAYYIAPEVLRKK-YDEKCDVWSCGVILYI 197
Query: 271 LLTGVVPY 278
LL G P+
Sbjct: 198 LLCGYPPF 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 75 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 129
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------YTAREGAKFPIK 181
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 182 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 233
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 234 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 46/288 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGR-KVAVKKPILSTSEELDNFHKELQLLCKLDH 120
+P + L+ + G V+ +G KVAVK + S D F E L+ +L H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQH 75
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKAL 175
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 76 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGM 130
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F
Sbjct: 131 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------XTAREGAKFPI 182
Query: 236 KNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMN 294
K + APE + + KSDV+SFGI + E++T G +PY + + LE
Sbjct: 183 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERG 234
Query: 295 YTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
Y +RP P + L++ CW P +RP+F
Sbjct: 235 YR-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 265
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 25/272 (9%)
Query: 89 GRKVAVK--KPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYE 144
G +VAVK KP S + + KE+++L L H + K+ + EF
Sbjct: 50 GEQVAVKSLKP-ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 145 SRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLA 204
S +L E L + ++ Q L A Q+ K + YL + VHRD+ NVL++ +
Sbjct: 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168
Query: 205 DFGLAEYRENLKE-ISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYS 263
DFGL + E KE ++K+ R S + + APE L + SDV+S
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDS--------------PVFWYAPECLMQSKFYIASDVWS 214
Query: 264 FGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRP-ILASLELGLPA 322
FG++++ELLT Y D + A + + T Q+T + L+ P
Sbjct: 215 FGVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD 270
Query: 323 SILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
+ L+++CW+ P NR SF ++ + +L+
Sbjct: 271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
+KK ++T+ E+ +L +LDHP + K NY E Y L +++
Sbjct: 54 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII 113
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD---RNLCPHLADFGLAE 210
+ + VD + I Q+ YLH IVHRD+KP N+LL+ R+ + DFGL+
Sbjct: 114 LRQKFSEVDAAV-IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 172
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+ E GG K+ + GT Y+APE+L+K+ + EK DV+S G+ +
Sbjct: 173 HFE----------------VGGKMKERL-GTAYYIAPEVLRKK-YDEKCDVWSCGVILYI 214
Query: 271 LLTGVVPY 278
LL G P+
Sbjct: 215 LLCGYPPF 222
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 78 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 132
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 133 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------XTAREGAKFPIK 184
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 185 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 236
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 237 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 266
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 57/293 (19%)
Query: 429 LSWGSFATCGRRETMEDTHFL---MPHMYNQKEIHMFGIFDGHRGSAAAEF--------- 476
L +G + G R MED H +PH ++ F ++DGH GS A +
Sbjct: 24 LRYGLSSMQGWRVEMEDAHTAVVGIPH--GLEDWSFFAVYDGHAGSRVANYCSTHLLEHI 81
Query: 477 -----------SARALPGFLQNLGSTTRPTDALLEAFIRTDVAFRNELDSLRKSKRVVQK 525
S AL ++N+ + R ++ ++R RN +D
Sbjct: 82 TTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMD----------- 130
Query: 526 DWHPGCTAIAALIVRNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERERVVSAGGN 585
G TA+ +I ++ N GD RA+L R G ++DH E+ER+ +AGG+
Sbjct: 131 --RSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGS 188
Query: 586 VNWQVDTWRVGPPALQVTRSIGDDDLKPA---------VXXXXXXXXXXXXXXDEYLVMA 636
V Q RV +L V+R++GD D K V DE++++A
Sbjct: 189 VMIQ----RVN-GSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILA 243
Query: 637 SDGLWDVVSHVEAVGIIKDTVKEP----GMCSKRLATEAAERGSKDNITVIVV 685
DG+WDV+S+ E +K ++ +C+ + T +GS+DN+++++V
Sbjct: 244 XDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDT-CLHKGSRDNMSIVLV 295
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 46/288 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGR-KVAVKKPILSTSEELDNFHKELQLLCKLDH 120
+P + L+ + G V+ +G KVAVK + S D F E L+ +L H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQH 73
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKAL 175
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 74 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGM 128
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F
Sbjct: 129 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------XTAREGAKFPI 180
Query: 236 KNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMN 294
K + APE + + KSDV+SFGI + E++T G +PY + + LE
Sbjct: 181 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERG 232
Query: 295 YTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
Y +RP P + L++ CW P +RP+F
Sbjct: 233 YR-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 263
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 64 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 118
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 119 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------YTAREGAKFPIK 170
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 171 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 222
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 223 R-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 252
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFS 343
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 35/280 (12%)
Query: 429 LSWGSFATCGRRETMEDTHFLMPHMYNQKEI-HMFGIFDGHRGSAAAEFSARALPGFLQN 487
L +G + G R MED H + + + E F ++DGH GS A++ L + N
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN 81
Query: 488 ----LGSTTRPTDALLEAFIRTDVAFRNELDSLRKSKRVVQKDWH----PGCTAIAALIV 539
GS P+ ++ IRT E+D + RV+ + H G TA+ LI
Sbjct: 82 NQDFKGSAGAPSVENVKNGIRTGFL---EID---EHMRVMSEKKHGADRSGSTAVGVLIS 135
Query: 540 RNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERERVVSAGGNVNWQVDTWRVGPPA 599
+ N GD R +LCR ++DH S E+ER+ +AGG+V Q RV +
Sbjct: 136 PQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQ----RVN-GS 190
Query: 600 LQVTRSIGDDDLKPAVXXXXXXXXXX----------XXXXDEYLVMASDGLWDVVSHVEA 649
L V+R++GD D K D+++++A DG+WDV+ + E
Sbjct: 191 LAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEEL 250
Query: 650 VGIIKDTVKEPG----MCSKRLATEAAERGSKDNITVIVV 685
++ ++ +C++ + T +GS+DN++VI++
Sbjct: 251 CDFVRSRLEVTDDLEKVCNEVVDT-CLYKGSRDNMSVILI 289
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 35/280 (12%)
Query: 429 LSWGSFATCGRRETMEDTHFLMPHMYNQKEI-HMFGIFDGHRGSAAAEFSARALPGFLQN 487
L +G + G R MED H + + + E F ++DGH GS A++ L + N
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN 81
Query: 488 ----LGSTTRPTDALLEAFIRTDVAFRNELDSLRKSKRVVQKDWH----PGCTAIAALIV 539
GS P+ ++ IRT E+D + RV+ + H G TA+ LI
Sbjct: 82 NQDFKGSAGAPSVENVKNGIRTGFL---EID---EHMRVMSEKKHGADRSGSTAVGVLIS 135
Query: 540 RNRLFVANAGDCRAILCRGGHPFALSRDHVASCLEERERVVSAGGNVNWQVDTWRVGPPA 599
+ N GD R +LCR ++DH S E+ER+ +AGG+V Q RV +
Sbjct: 136 PQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQ----RVN-GS 190
Query: 600 LQVTRSIGDDDLKPAVXXXXXXXXXX----------XXXXDEYLVMASDGLWDVVSHVEA 649
L V+R++GD D K D+++++A DG+WDV+ + E
Sbjct: 191 LAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEEL 250
Query: 650 VGIIKDTVKEPG----MCSKRLATEAAERGSKDNITVIVV 685
++ ++ +C++ + T +GS+DN++VI++
Sbjct: 251 CDFVRSRLEVTDDLEKVCNEVVDT-CLYKGSRDNMSVILI 289
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 56/294 (19%)
Query: 100 STSEELDNFHKELQLLCKLDH-PGLAKFVAAHAKPPNYMFFFEFYESRNLAE---KLHVE 155
++ ++ +F EL++LCKL H P + + A E+ NL + K V
Sbjct: 54 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 113
Query: 156 EWSP------------SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL 203
E P S Q+L AA +A+ + YL +HRD+ N+L+ N +
Sbjct: 114 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 173
Query: 204 ADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDV 261
ADFGL+ +E + K +G L +MA E L +++ SDV
Sbjct: 174 ADFGLSRGQE-------------------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 214
Query: 262 YSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+S+G+ + E+++ G PY + A+ + L Y ++ L
Sbjct: 215 WSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEK-----------------PLNC 256
Query: 321 PASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEEDLCAGKSYVTYD 374
+ L+++CW P+ RPSF+ I + L+ +LE RK+ L +Y D
Sbjct: 257 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGID 310
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 56/294 (19%)
Query: 100 STSEELDNFHKELQLLCKLDH-PGLAKFVAAHAKPPNYMFFFEFYESRNLAE---KLHVE 155
++ ++ +F EL++LCKL H P + + A E+ NL + K V
Sbjct: 64 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 123
Query: 156 EWSP------------SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL 203
E P S Q+L AA +A+ + YL +HRD+ N+L+ N +
Sbjct: 124 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 183
Query: 204 ADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDV 261
ADFGL+ +E + K +G L +MA E L +++ SDV
Sbjct: 184 ADFGLSRGQE-------------------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 224
Query: 262 YSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+S+G+ + E+++ G PY + A+ + L Y ++ L
Sbjct: 225 WSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEK-----------------PLNC 266
Query: 321 PASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEEDLCAGKSYVTYD 374
+ L+++CW P+ RPSF+ I + L+ +LE RK+ L +Y D
Sbjct: 267 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGID 320
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 25/272 (9%)
Query: 89 GRKVAVK--KPILSTSEELDNFHKELQLLCKLDHPGLAKF--VAAHAKPPNYMFFFEFYE 144
G +VAVK KP S + + KE+++L L H + K+ + EF
Sbjct: 38 GEQVAVKSLKP-ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 145 SRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLA 204
S +L E L + ++ Q L A Q+ K + YL + VHRD+ NVL++ +
Sbjct: 97 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 156
Query: 205 DFGLAEYRENLKE-ISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYS 263
DFGL + E KE ++K+ R S + + APE L + SDV+S
Sbjct: 157 DFGLTKAIETDKEXXTVKDDRDS--------------PVFWYAPECLMQSKFYIASDVWS 202
Query: 264 FGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRP-ILASLELGLPA 322
FG++++ELLT Y D + A + + T Q+T + L+ P
Sbjct: 203 FGVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD 258
Query: 323 SILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
+ L+++CW+ P NR SF ++ + +L+
Sbjct: 259 EVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 290
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVC-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFS 343
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 46/288 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGR-KVAVKKPILSTSEELDNFHKELQLLCKLDH 120
+P + L+ + G V+ +G KVAVK + S D F E L+ +L H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMKQLQH 77
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKAL 175
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 78 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGM 132
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
++ +HRD++ AN+L+ L +ADFGLA E+ + + + F
Sbjct: 133 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------YTAREGAKFPI 184
Query: 236 KNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMN 294
K + APE + + KSDV+SFGI + E++T G +PY + + LE
Sbjct: 185 K-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERG 236
Query: 295 YTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
Y +RP P + L++ CW P +RP+F
Sbjct: 237 YR-----------MVRPD------NCPEELYQLMRLCWKERPEDRPTF 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 128/291 (43%), Gaps = 40/291 (13%)
Query: 63 LPPSSYTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+ PS T + I G +V+ L+ KVA+K I + ++F +E +++ KL HP
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHP 62
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + + FEF E L++ L + + + +L + + + + YL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+ N L+ N ++DFG+ + L + +S T F K
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGT-KFPVK----- 169
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQL 300
+ +PE+ +S KSDV+SFG+ + E+ + G +PY N + ++
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--------------NRSNSEV 213
Query: 301 TAAVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALEL 349
+ +G +P LAS + ++ CW P +RP+FS + +L
Sbjct: 214 VEDISTGFRLYKPRLAS------THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + G V+ AT + K + S ++ F E ++ L H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-VDQVLMIAAQLAKALQYLHN 180
L K A K P Y+ EF +L + L +E S + +++ +AQ+A+ + ++
Sbjct: 71 KLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+HRD++ AN+L+ +L +ADFGLA E+ + + + F K
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE--------YTAREGAKFPIK---- 177
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + + KSDV+SFGI + E++T G +PY + + + LE Y
Sbjct: 178 ---WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-SNPEVIRALERGYRMP- 232
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
RP P + +++ RCW P RP+F I LD
Sbjct: 233 ----------RP------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 63 LPPSSYTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+ PS T + I G +V+ L+ KVA+K I + ++F +E +++ KL HP
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHP 62
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + + FEF E L++ L + + + +L + + + + YL
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+ N L+ N ++DFG+ + L + +S T F K
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGT-KFPVK----- 169
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQL 300
+ +PE+ +S KSDV+SFG+ + E+ + G +PY N + ++
Sbjct: 170 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--------------NRSNSEV 213
Query: 301 TAAVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
+ +G +P LAS + ++ CW P +RP+FS + +L + E
Sbjct: 214 VEDISTGFRLYKPRLAS------THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 46/250 (18%)
Query: 105 LDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---HVEEWSPSV 161
++ E+++L LDHP + K N E E L E++ + S
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPH----LADFGLAEYRENLKE 217
V + Q+ AL Y H+ +VH+D+KP N+L ++ PH + DFGLAE
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAEL------ 176
Query: 218 ISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
++S H N GT +YMAPE+ K+++ + K D++S G+ + LLTG +P
Sbjct: 177 -----FKSDE------HSTNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLP 224
Query: 278 Y--TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGN 335
+ T L Q T E NY + RP L + L+++ +
Sbjct: 225 FTGTSLEEVQQKATYKEPNYAVE----------CRP--------LTPQAVDLLKQMLTKD 266
Query: 336 PHNRPSFSDI 345
P RPS + +
Sbjct: 267 PERRPSAAQV 276
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTF 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ ++AQ+A + Y+
Sbjct: 71 KLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ W + ++
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIED------NEWTA---------RQGAKF 174
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ + APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 220
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 221 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 63 LPPSSYTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+ PS T + I G +V+ L+ KVA+K I + ++F +E +++ KL HP
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHP 65
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + + FEF E L++ L + + + +L + + + + YL
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+ N L+ N ++DFG+ + L + +S T F K
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGT-KFPVK----- 172
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQL 300
+ +PE+ +S KSDV+SFG+ + E+ + G +PY N + ++
Sbjct: 173 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--------------NRSNSEV 216
Query: 301 TAAVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
+ +G +P LAS + ++ CW P +RP+FS + +L + E
Sbjct: 217 VEDISTGFRLYKPRLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 63 LPPSSYTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+ PS T + I G +V+ L+ KVA+K I + ++F +E +++ KL HP
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHP 60
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + + FEF E L++ L + + + +L + + + + YL
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+ N L+ N ++DFG+ + L + +S T F K
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGT-KFPVK----- 167
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQL 300
+ +PE+ +S KSDV+SFG+ + E+ + G +PY N + ++
Sbjct: 168 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--------------NRSNSEV 211
Query: 301 TAAVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
+ +G +P LAS + ++ CW P +RP+FS + +L + E
Sbjct: 212 VEDISTGFRLYKPRLAS------THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 42/287 (14%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGR-KVAVK--KPILSTSEELDNFHKELQLLCKL 118
+P S L+ + G V+ T +G KVA+K KP + E +F +E Q++ KL
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIMKKL 61
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQY 177
H L + A ++ P Y+ E+ +L + L E + ++ +AAQ+A + Y
Sbjct: 62 KHDKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 178 LHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKN 237
+ + +HRD++ AN+L+ L +ADFGLA E+ + + + + K
Sbjct: 121 IERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK--------- 171
Query: 238 MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYT 296
+ APE + KSDV+SFGI + EL+T G VPY + VLE
Sbjct: 172 ------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM----NNREVLEQ--- 218
Query: 297 EQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFS 343
V G R P S+ L+ CW +P RP+F
Sbjct: 219 --------VERGYR---MPCPQDCPISLHELMIHCWKKDPEERPTFE 254
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVM-EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFS 343
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 240 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + ++
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA---------------RQGAKF 343
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ + APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 389
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 390 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 428
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 240 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + ++
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA---------------RQGAKF 343
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ + APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 389
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 390 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 428
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 65 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 171
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 172 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 214
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFS 343
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 215 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 240 KLVQLYAVVSEEPIYIVG-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + ++
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA---------------RQGAKF 343
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ + APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 389
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 390 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 428
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 323 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + ++
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA---------------RQGAKF 426
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ + APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 472
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 473 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 511
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 63 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 169
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 170 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 212
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 213 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTF 251
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + K M E+ E+ +L L + +
Sbjct: 55 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 114
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + + ++YL ++ VHRD+ N+L++ NL ++DFG++ E+
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED------ 168
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + APE + + SDV+S+GI + E+++ G PY
Sbjct: 169 -------DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 221
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
D+ + Q + A+ G P + P ++ L+ CW +R
Sbjct: 222 DM--------------SNQDVIKAIEEGYRLP----PPMDCPIALHQLMLDCWQKERSDR 263
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 264 PKFGQIVNMLDKLIRNPNSLK 284
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 67 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 173
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 174 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 216
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 217 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 255
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + K M E+ E+ +L L + +
Sbjct: 49 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 108
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + + ++YL ++ VHRD+ N+L++ NL ++DFG++ E+
Sbjct: 109 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED------ 162
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + APE + + SDV+S+GI + E+++ G PY
Sbjct: 163 -------DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 215
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
D+ + Q + A+ G P + P ++ L+ CW +R
Sbjct: 216 DM--------------SNQDVIKAIEEGYRLP----PPMDCPIALHQLMLDCWQKERSDR 257
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 258 PKFGQIVNMLDKLIRNPNSLK 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 32/261 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + K M E+ E+ +L L + +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + + ++YL ++ VHRD+ N+L++ NL ++DFG++ E+
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED------ 183
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYT 279
P + + + + APE + + SDV+S+GI + E+++ G PY
Sbjct: 184 -------DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 236
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
D+ + Q + A+ G P + P ++ L+ CW +R
Sbjct: 237 DM--------------SNQDVIKAIEEGYRLP----PPMDCPIALHQLMLDCWQKERSDR 278
Query: 340 PSFSDIALELDLVLEHRKSLK 360
P F I LD ++ + SLK
Sbjct: 279 PKFGQIVNMLDKLIRNPNSLK 299
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 29/220 (13%)
Query: 74 IARGAESVVYEAT--LDGRKVAVKKPILSTSE-ELDNFHKELQLLCKLDHPGLAKFVAA- 129
+ RG VV+EA +D A+K+ L E + +E++ L KL+HPG+ ++ A
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 130 ----------HAKPPNYMFF-FEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKA 174
+ P Y++ + NL + + +EE SV L I Q+A+A
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV--CLHIFLQIAEA 130
Query: 175 LQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGL--AEYRENLKEISLKNWRSSGKPTGG 232
+++LH+ G++HRD+KP+N+ + + DFGL A ++ ++ L + + TG
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG- 189
Query: 233 FHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
VGT +YM+PE + +S K D++S G+ + ELL
Sbjct: 190 -----QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T ++ +F E ++ + DHP + K M EF E+ +L L + +
Sbjct: 48 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 107
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL ++ VHR + N+L++ NL ++DFGL+ + E+
Sbjct: 108 VIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED------ 161
Query: 221 KNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+ PT + + G + + APE ++ + SDV+S+GI + E+++ G P
Sbjct: 162 ----DTSDPT---YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y D+ T Q + A+ P + P+++ L+ CW + +
Sbjct: 215 YWDM--------------TNQDVINAIEQDYRLP----PPMDCPSALHQLMLDCWQKDRN 256
Query: 338 NRPSFSDIALELDLVLEHRKSLK 360
+RP F I LD ++ + SLK
Sbjct: 257 HRPKFGQIVNTLDKMIRNPNSLK 279
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ K+ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTF 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFS 343
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 44/287 (15%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P + L+ + G V+ +G K + S D F E L+ +L H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----VDQVLMIAAQLAKALQ 176
L + A + P Y+ E+ E+ +L + L +PS ++++L +AAQ+A+ +
Sbjct: 65 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMA 119
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++ +HR+++ AN+L+ L +ADFGLA E+ + + + F K
Sbjct: 120 FIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE--------YTAREGAKFPIK 171
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNY 295
+ APE + + KSDV+SFGI + E++T G +PY + + LE Y
Sbjct: 172 -------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY 223
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+RP P + L++ CW P +RP+F
Sbjct: 224 RM-----------VRPD------NCPEELYQLMRLCWKERPEDRPTF 253
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 56/294 (19%)
Query: 100 STSEELDNFHKELQLLCKLDH-PGLAKFVAAHAKPPNYMFFFEFYESRNLAE---KLHVE 155
++ ++ +F EL++LCKL H P + + A E+ NL + K V
Sbjct: 61 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 120
Query: 156 EWSP------------SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL 203
E P S Q+L AA +A+ + YL +HR++ N+L+ N +
Sbjct: 121 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKI 180
Query: 204 ADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDV 261
ADFGL+ +E + K +G L +MA E L +++ SDV
Sbjct: 181 ADFGLSRGQE-------------------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 221
Query: 262 YSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+S+G+ + E+++ G PY + A+ + L Y ++ L
Sbjct: 222 WSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEK-----------------PLNC 263
Query: 321 PASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKSLKEEDLCAGKSYVTYD 374
+ L+++CW P+ RPSF+ I + L+ +LE RK+ L +Y D
Sbjct: 264 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGID 317
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 92 VAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEK 151
VAVK + + E++ F KE ++ ++ HP L + + P + E+ NL +
Sbjct: 60 VAVKT-LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 152 L---HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGL 208
L + EE + V +L +A Q++ A++YL +HRD+ N L+ N +ADFGL
Sbjct: 119 LRECNREEVTAVV--LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGL 176
Query: 209 AEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGI 266
+ TG + + + + APE L S KSDV++FG+
Sbjct: 177 SRLM-----------------TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGV 219
Query: 267 SINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASIL 325
+ E+ T G+ PY + +Q + +LE Y +Q G P +
Sbjct: 220 LLWEIATYGMSPYPGIDL-SQVYDLLEKGYRMEQPE-----------------GCPPKVY 261
Query: 326 SLIQRCWDGNPHNRPSFSD 344
L++ CW +P +RPSF++
Sbjct: 262 ELMRACWKWSPADRPSFAE 280
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 139/325 (42%), Gaps = 63/325 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+P S LL ARG V++A L VAVK L + + +E+ + H
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHEN 70
Query: 123 LAKFVAAHAKPPNY----MFFFEFYESRNLAEKL--HVEEWSPSVDQVLMIAAQLAKALQ 176
L +F+AA + N F++ +L + L ++ W +++ +A +++ L
Sbjct: 71 LLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITW----NELCHVAETMSRGLS 126
Query: 177 YLH-----------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRS 225
YLH I HRD K NVLL +L LADFGLA E
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFE------------ 174
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS-----DVYSFGISINELLTG------ 274
GKP G H + VGT YMAPE+L+ I+ ++ D+Y+ G+ + EL++
Sbjct: 175 PGKPPGDTHGQ--VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
Query: 275 -----VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLP--ASILSL 327
++P+ + E H LE +L VV +RP + L P A +
Sbjct: 233 PVDEYMLPFEE---EIGQHPSLE------ELQEVVVHKKMRPTIKDHWLKHPGLAQLCVT 283
Query: 328 IQRCWDGNPHNRPSFSDIALELDLV 352
I+ CWD + R S + + L+
Sbjct: 284 IEECWDHDAEARLSAGCVEERVSLI 308
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATL---DGR--KVAVK--KPILSTSEELDNFHKELQLL 115
+P +TL + +G V EA L DG KVAVK K + S +++ F +E +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 116 CKLDHPGLAKFVA------AHAKPPNYMFFFEFYESRNL-----AEKLHVEEWSPSVDQV 164
+ DHP +AK V A + P M F + +L A ++ ++ + +
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 165 LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWR 224
+ +A ++YL + +HRD+ N +L ++ +ADFGL
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGL---------------- 183
Query: 225 SSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDL 281
S +G ++++ L ++A E L +++ SDV++FG+++ E++T G PY +
Sbjct: 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243
Query: 282 RAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPS 341
+ ++ N +Q + L+ +CW +P RPS
Sbjct: 244 ENAEIYNYLIGGNRLKQPPECM------------------EEVYDLMYQCWSADPKQRPS 285
Query: 342 FSDIALELDLVLEH 355
F+ + +EL+ +L H
Sbjct: 286 FTCLRMELENILGH 299
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD+ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 180
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 181 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 223
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 224 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTF 262
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 78 AESVVYEATLD-GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNY 136
A V+ ++ D GR K I EE+ N E+ LL LDHP + K +
Sbjct: 65 AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN---EISLLKSLDHPNIIKLFDVFEDKKYF 121
Query: 137 MFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD 196
EFYE L E++ D I Q+ + YLH IVHRD+KP N+LL+
Sbjct: 122 YLVTEFYEGGELFEQIINRHKFDECDAA-NIMKQILSGICYLHKHNIVHRDIKPENILLE 180
Query: 197 RN---LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE 253
L + DFGL+ + + + ++ +GT Y+APE+LKK+
Sbjct: 181 NKNSLLNIKIVDFGLSSF-----------------FSKDYKLRDRLGTAYYIAPEVLKKK 223
Query: 254 IHSEKSDVYSFGISINELLTGVVPY 278
++EK DV+S G+ + LL G P+
Sbjct: 224 -YNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 241 KLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGL E+ + + ++
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTA---------------RQGAKF 344
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ + APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 345 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 390
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW +P RP+F
Sbjct: 391 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKDPEERPTF 429
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 35/273 (12%)
Query: 90 RKVAVKKPILS---TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESR 146
R VAV L T ++ +F E ++ + DHP + + M EF E+
Sbjct: 70 RDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENG 129
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
L L + +V Q++ + +A ++YL ++G VHRD+ N+L++ NL ++DF
Sbjct: 130 ALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDF 189
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
GL+ E+ E TGG + + APE ++ + SDV+S+GI
Sbjct: 190 GLSRVIEDDPEAVYTT-------TGGKI------PVRWTAPEAIQYRKFTSASDVWSYGI 236
Query: 267 SINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASIL 325
+ E+++ G PY D+ + Q + A+ G P + PA +
Sbjct: 237 VMWEVMSYGERPYWDM--------------SNQDVIKAIEEGYRLP----APMDCPAGLH 278
Query: 326 SLIQRCWDGNPHNRPSFSDIALELDLVLEHRKS 358
L+ CW RP F I LD ++ + S
Sbjct: 279 QLMLDCWQKERAERPKFEQIVGILDKMIRNPNS 311
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P Y+ E+ +L + L E + Q++ ++AQ+A + Y+
Sbjct: 71 KLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------------ 177
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 178 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 220
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 221 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 259
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILST--SEELDNFHKELQLLCKLDHP 121
P + ++ + GA VY+A V ++ T EEL+++ E+ +L DHP
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + A N EF + + E + Q+ ++ Q AL YLH+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
I+HRD+K N+L + LADFG +S KN R+ + + + +GT
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFG----------VSAKNTRTIQR------RDSFIGT 198
Query: 242 LIYMAPEIL-----KKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
+MAPE++ K + K+DV+S GI++ E+ P+ +L
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 34/226 (15%)
Query: 65 PSSYTLLSPIARGAESVVY---------EATLDGRKVAVKKPILSTSEELDNFHKELQLL 115
PS + LL + +G+ V+ L KV +KK L + + E +L
Sbjct: 27 PSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKV-LKKATLKVRDRVRT-KMERDIL 84
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKAL 175
++HP + K A +F +L +L E D V A+LA L
Sbjct: 85 ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED-VKFYLAELALGL 143
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
+LH+LGI++RD+KP N+LLD L DFGL+ +E + H+
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS--KEAID-----------------HE 184
Query: 236 K---NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
K + GT+ YMAPE++ ++ HS +D +S+G+ + E+LTG +P+
Sbjct: 185 KKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 132/327 (40%), Gaps = 68/327 (20%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 28 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 87
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 88 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 146
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 147 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 203
Query: 205 DFGLAE--YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSD 260
DFG+A YR G+++K L +M PE + I + K+D
Sbjct: 204 DFGMARDIYR------------------AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 245
Query: 261 VYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLEL 318
+SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 246 TWSFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PK 286
Query: 319 GLPASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 287 NCPGPVYRIMTQCWQHQPEDRPNFAII 313
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 132/327 (40%), Gaps = 68/327 (20%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 51 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 110
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 111 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 169
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 170 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 226
Query: 205 DFGLAE--YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSD 260
DFG+A YR G+++K L +M PE + I + K+D
Sbjct: 227 DFGMARDIYR------------------AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTD 268
Query: 261 VYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLEL 318
+SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 269 TWSFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PK 309
Query: 319 GLPASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 310 NCPGPVYRIMTQCWQHQPEDRPNFAII 336
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 137/325 (42%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ KL+H + + + + E +L L
Sbjct: 85 EVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 200
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 201 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 245 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 285
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 23/226 (10%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
++K +STS +E+ +L LDHP + K NY E Y+ L +++
Sbjct: 70 IRKTSVSTSSN-SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII 128
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRNLCPHLADFGLAE 210
VD ++I Q+ + YLH IVHRD+KP N+LL +++ + DFGL+
Sbjct: 129 HRMKFNEVDAAVIIK-QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
EN K++ K +GT Y+APE+L+K+ + EK DV+S G+ +
Sbjct: 188 VFENQKKM-----------------KERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFI 229
Query: 271 LLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASL 316
LL G P+ + V + YT VS G + ++ +
Sbjct: 230 LLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQM 275
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 36/283 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L + +G V+ T +G K + + + F +E Q++ KL H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHN 180
L + A ++ P E+ +L + L E + Q++ +AAQ+A + Y+
Sbjct: 64 KLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+ VHRD++ AN+L+ NL +ADFGLA E+ + + + + K
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK------------ 170
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + KSDV+SFGI + EL T G VPY + ++
Sbjct: 171 ---WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------------VNRE 213
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ V G P P S+ L+ +CW P RP+F
Sbjct: 214 VLDQVERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTF 252
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 60/315 (19%)
Query: 52 GCCSSQSIP--------------LHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKP 97
G C S+P +P S L + G V+ AT + K
Sbjct: 154 GLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT 213
Query: 98 ILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEW 157
+ S ++ F E ++ L H L K A K P Y+ EF +L + L +E
Sbjct: 214 MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEG 272
Query: 158 SPS-VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S + +++ +AQ+A+ + ++ +HRD++ AN+L+ +L +ADFGLA
Sbjct: 273 SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKF- 331
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+ + APE + + KSDV+SFGI + E++T G
Sbjct: 332 ------------------------PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGN 335
+PY + + + LE Y RP P + +++ RCW
Sbjct: 368 IPYPGM-SNPEVIRALERGYRMP-----------RP------ENCPEELYNIMMRCWKNR 409
Query: 336 PHNRPSFSDIALELD 350
P RP+F I LD
Sbjct: 410 PEERPTFEYIQSVLD 424
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILST--SEELDNFHKELQLLCKLDHP 121
P + ++ + GA VY+A V ++ T EEL+++ E+ +L DHP
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + A N EF + + E + Q+ ++ Q AL YLH+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
I+HRD+K N+L + LADFG +S KN R + + + +GT
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFG----------VSAKNTRXIQR------RDSFIGT 198
Query: 242 LIYMAPEIL-----KKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
+MAPE++ K + K+DV+S GI++ E+ P+ +L
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILST--SEELDNFHKELQLLCKLDHP 121
P + ++ + GA VY+A V ++ T EEL+++ E+ +L DHP
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + A N EF + + E + Q+ ++ Q AL YLH+
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
I+HRD+K N+L + LADFG +S KN R + + +GT
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFG----------VSAKNTRXIQR------RDXFIGT 198
Query: 242 LIYMAPEIL-----KKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
+MAPE++ K + K+DV+S GI++ E+ P+ +L
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 85 EVYSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 200
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 201 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 245 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 285
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 40/296 (13%)
Query: 63 LPPSSYTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+ PS T + I G +V+ L+ KVA+K I + ++F +E +++ KL HP
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHP 63
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + + EF E L++ L + + + +L + + + + YL
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+ N L+ N ++DFG+ + L + +S T F K
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRF-------VLDDQYTSSTGT-KFPVK----- 170
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQL 300
+ +PE+ +S KSDV+SFG+ + E+ + G +PY N + ++
Sbjct: 171 --WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--------------NRSNSEV 214
Query: 301 TAAVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
+ +G +P LAS + ++ CW P +RP+FS + +L + E
Sbjct: 215 VEDISTGFRLYKPRLAS------THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 27 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 86
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 87 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 145
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 146 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 202
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 203 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 246
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 247 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 287
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 288 PGPVYRIMTQCWQHQPEDRPNFAII 312
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 25 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 84
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 85 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 143
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 200
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 201 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 245 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 285
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 286 PGPVYRIMTQCWQHQPEDRPNFAII 310
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK------------ 201
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 247
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 248 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 10 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 70 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 128
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 185
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 186 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 230 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 270
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 271 PGPVYRIMTQCWQHQPEDRPNFAII 295
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVK--K 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 2 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 61
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 62 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 120
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 121 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 177
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 178 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 221
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 222 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 262
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 263 PGPVYRIMTQCWQHQPEDRPNFAII 287
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN C G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 10 PNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 70 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 128
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 185
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 186 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 230 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 270
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 271 PGPVYRIMTQCWQHQPEDRPNFAII 295
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 172
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 220
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------------DITV 266
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 267 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 202
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------------DITV 248
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 249 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 125/293 (42%), Gaps = 48/293 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 152
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 200
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 246
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVL 353
++ G L+P P + ++ +CW RPSFS++ + +
Sbjct: 247 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 146
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 194
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 240
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 241 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 173
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 221
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------------DITV 267
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 268 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 201
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 247
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 248 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 151
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 199
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 245
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 246 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 202
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------------DITV 248
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 249 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK ++YL +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKF 149
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------------ 197
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 243
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 244 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 31/226 (13%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRK---VAVKK-PILSTSEELDNFHKELQLLCKLD 119
P +T L I +G+ V++ +D R VA+K + +E+++ +E+ +L + D
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFY---ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
P + K+ ++ K E+ + +L E ++E Q+ I ++ K L
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLD 118
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
YLH+ +HRD+K ANVLL + LADFG+A G+ T K+
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----------------GQLTDTQIKR 161
Query: 237 N-MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
N VGT +MAPE++K+ + K+D++S GI+ EL G P+++L
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 31/226 (13%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRK---VAVKK-PILSTSEELDNFHKELQLLCKLD 119
P +T L I +G+ V++ +D R VA+K + +E+++ +E+ +L + D
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFY---ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
P + K+ ++ K E+ + +L E ++E Q+ I ++ K L
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLD 118
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
YLH+ +HRD+K ANVLL + LADFG+A G+ T K+
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----------------GQLTDTQIKR 161
Query: 237 N-MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
N VGT +MAPE++K+ + K+D++S GI+ EL G P+++L
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 137/320 (42%), Gaps = 71/320 (22%)
Query: 57 QSIPLHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLC 116
QS+PL L L ARG V++A L VAVK + + N + E+ L
Sbjct: 22 QSMPLQL-------LEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY-EVYSLP 73
Query: 117 KLDHPGLAKFVAAHAKPP----NYMFFFEFYESRNLAE--KLHVEEWSPSVDQVLMIAAQ 170
+ H + +F+ A + + F+E +L++ K +V W +++ IA
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSW----NELCHIAET 129
Query: 171 LAKALQYLH----------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
+A+ L YLH I HRD+K NVLL NL +ADFGLA E
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE------- 182
Query: 221 KNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS-----DVYSFGISINELLTG- 274
+GK G H + VGT YMAPE+L+ I+ ++ D+Y+ G+ + EL +
Sbjct: 183 -----AGKSAGDTHGQ--VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235
Query: 275 ----------VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASL---ELGLP 321
++P+ + E H LE + VV RP+L G+
Sbjct: 236 TAADGPVDEYMLPFEE---EIGQHPSLE------DMQEVVVHKKKRPVLRDYWQKHAGM- 285
Query: 322 ASILSLIQRCWDGNPHNRPS 341
A + I+ CWD + R S
Sbjct: 286 AMLCETIEECWDHDAEARLS 305
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 31/226 (13%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRK---VAVKK-PILSTSEELDNFHKELQLLCKLD 119
P +T L I +G+ V++ +D R VA+K + +E+++ +E+ +L + D
Sbjct: 20 PEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 78
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFY---ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
P + K+ ++ K E+ + +L E ++E Q+ I ++ K L
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLD 133
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
YLH+ +HRD+K ANVLL + LADFG+A G+ T K+
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----------------GQLTDTQIKR 176
Query: 237 N-MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
N VGT +MAPE++K+ + K+D++S GI+ EL G P+++L
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 31/226 (13%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRK---VAVKK-PILSTSEELDNFHKELQLLCKLD 119
P +T L I +G+ V++ +D R VA+K + +E+++ +E+ +L + D
Sbjct: 25 PEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 83
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFY---ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
P + K+ ++ K E+ + +L E ++E Q+ I ++ K L
Sbjct: 84 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLD 138
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
YLH+ +HRD+K ANVLL + LADFG+A G+ T K+
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA-----------------GQLTDTQIKR 181
Query: 237 N-MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
N VGT +MAPE++K+ + K+D++S GI+ EL G P+++L
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 78 AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPP 134
E ++ + + G++ AVK K + + ++ +E+QLL +LDHP + K
Sbjct: 64 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 123
Query: 135 NYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL 194
+ E Y L +++ + VD +I Q+ + Y+H IVHRD+KP N+L
Sbjct: 124 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-QVLSGITYMHKNKIVHRDLKPENLL 182
Query: 195 LD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
L+ ++ + DFGL+ + E K++ K+ +GT Y+APE+L
Sbjct: 183 LESKSKDANIRIIDFGLSTHFEASKKM-----------------KDKIGTAYYIAPEVLH 225
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ EK DV+S G+ + LL+G P+
Sbjct: 226 G-TYDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 78 AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPP 134
E ++ + + G++ AVK K + + ++ +E+QLL +LDHP + K
Sbjct: 63 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 122
Query: 135 NYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL 194
+ E Y L +++ + VD +I Q+ + Y+H IVHRD+KP N+L
Sbjct: 123 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-QVLSGITYMHKNKIVHRDLKPENLL 181
Query: 195 LD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
L+ ++ + DFGL+ + E K++ K+ +GT Y+APE+L
Sbjct: 182 LESKSKDANIRIIDFGLSTHFEASKKM-----------------KDKIGTAYYIAPEVLH 224
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ EK DV+S G+ + LL+G P+
Sbjct: 225 G-TYDEKCDVWSTGVILYILLSGCPPF 250
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 34/263 (12%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T + F E ++ + +HP + + M EF E+ L L + + +
Sbjct: 55 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 114
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL + VHRD+ N+L++ NL ++DFGL+ + E
Sbjct: 115 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE------ 168
Query: 221 KNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+S PT + ++ G + + APE + + SD +S+GI + E+++ G P
Sbjct: 169 ----NSSDPT---YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y D+ + +E +Y L P P S+ L+ CW + +
Sbjct: 222 YWDM-SNQDVINAIEQDYR------------LPP-----PPDCPTSLHQLMLDCWQKDRN 263
Query: 338 NRPSFSDIALELDLVLEHRKSLK 360
RP F + LD ++ + SLK
Sbjct: 264 ARPRFPQVVSALDKMIRNPASLK 286
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 78 AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPP 134
E ++ + + G++ AVK K + + ++ +E+QLL +LDHP + K
Sbjct: 40 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 99
Query: 135 NYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL 194
+ E Y L +++ + VD +I Q+ + Y+H IVHRD+KP N+L
Sbjct: 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-QVLSGITYMHKNKIVHRDLKPENLL 158
Query: 195 LD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
L+ ++ + DFGL+ + E K++ K+ +GT Y+APE+L
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEASKKM-----------------KDKIGTAYYIAPEVLH 201
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ EK DV+S G+ + LL+G P+
Sbjct: 202 G-TYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 36/283 (12%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAKFVAAH 130
I RG V+ L D VAVK + +L F +E ++L + HP + + +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 131 AKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKP 190
+ E + + L E V +L + A ++YL + +HRD+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 191 ANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL 250
N L+ ++DFG++ RE + +GG + + T APE L
Sbjct: 242 RNCLVTEKNVLKISDFGMS--REEADGVX--------AASGGLRQVPVKWT----APEAL 287
Query: 251 KKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL 309
+S +SDV+SFGI + E + G PY +L + QQ V GG
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASPYPNL--------------SNQQTREFVEKGGR 333
Query: 310 RPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
P EL P ++ L+++CW P RPSFS I EL +
Sbjct: 334 LP---CPEL-CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 36/283 (12%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAKFVAAH 130
I RG V+ L D VAVK + +L F +E ++L + HP + + +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 131 AKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKP 190
+ E + + L E V +L + A ++YL + +HRD+
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAA 241
Query: 191 ANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL 250
N L+ ++DFG++ RE + +GG + + T APE L
Sbjct: 242 RNCLVTEKNVLKISDFGMS--REEADGVY--------AASGGLRQVPVKWT----APEAL 287
Query: 251 KKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL 309
+S +SDV+SFGI + E + G PY +L + QQ V GG
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLGASPYPNL--------------SNQQTREFVEKGGR 333
Query: 310 RPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
P EL P ++ L+++CW P RPSFS I EL +
Sbjct: 334 LP---CPEL-CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 78 AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPP 134
E ++ + + G++ AVK K + + ++ +E+QLL +LDHP + K
Sbjct: 46 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 105
Query: 135 NYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL 194
+ E Y L +++ + VD +I Q+ + Y+H IVHRD+KP N+L
Sbjct: 106 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-QVLSGITYMHKNKIVHRDLKPENLL 164
Query: 195 LD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
L+ ++ + DFGL+ + E K++ K+ +GT Y+APE+L
Sbjct: 165 LESKSKDANIRIIDFGLSTHFEASKKM-----------------KDKIGTAYYIAPEVLH 207
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ EK DV+S G+ + LL+G P+
Sbjct: 208 G-TYDEKCDVWSTGVILYILLSGCPPF 233
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ KL+H + + + + E +L L
Sbjct: 71 EVCSEQDELD-FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 186
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 187 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 231 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 271
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 272 PGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 74 IARGAESVVYEAT-LDGRKVAVKKPILSTS-----EELDNFHKELQLLCKLDHPGLAKFV 127
I +G VVY +D + ++ I S S ++++ F +E L+ L+HP + +
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 128 AAHAKPPNYMFFFEFYESR-NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHR 186
P Y +L + + + +P+V ++ Q+A+ ++YL VHR
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 187 DVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMA 246
D+ N +LD + +ADFGLA + + S++ R + P + A
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK------------WTA 196
Query: 247 PEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVV 305
E L+ + KSDV+SFG+ + ELLT G PY + H + + Q
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYC--- 253
Query: 306 SGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVL 353
P S+ ++Q+CW+ +P RP+F + E++ ++
Sbjct: 254 ---------------PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK +++L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------------ 203
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 249
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 250 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 72 SPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
S + RGA S+VY G + +L + + E+ +L +L HP + K
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
P E L +++ VE+ S Q+ +A+ YLH GIVHRD+KP
Sbjct: 119 TPTEISLVLELVTGGELFDRI-VEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPE 177
Query: 192 NVLL-----DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMA 246
N+L D L +ADFGL++ E+ K + GT Y A
Sbjct: 178 NLLYATPAPDAPL--KIADFGLSKIVEH-----------------QVLMKTVCGTPGYCA 218
Query: 247 PEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAE 284
PEIL+ + + D++S GI LL G P+ D R +
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 36/264 (13%)
Query: 101 TSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS 160
T + F E ++ + +HP + + M EF E+ L L + + +
Sbjct: 57 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 116
Query: 161 VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISL 220
V Q++ + +A ++YL + VHRD+ N+L++ NL ++DFGL+ + E
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE------ 170
Query: 221 KNWRSSGKPTGGFHKKNMVGTLI---YMAPEILKKEIHSEKSDVYSFGISINELLT-GVV 276
+S PT + + +G I + APE + + SD +S+GI + E+++ G
Sbjct: 171 ----NSSDPT----ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER 222
Query: 277 PYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNP 336
PY D+ + +E +Y L P P S+ L+ CW +
Sbjct: 223 PYWDM-SNQDVINAIEQDYR------------LPP-----PPDCPTSLHQLMLDCWQKDR 264
Query: 337 HNRPSFSDIALELDLVLEHRKSLK 360
+ RP F + LD ++ + SLK
Sbjct: 265 NARPRFPQVVSALDKMIRNPASLK 288
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P YT I +GA VY A G++VA+++ L + + E+ ++ + +P
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ ++ ++ E+ +L + V E Q+ + + +AL++LH+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+K N+LL + L DFG +I+ + + S MVGT
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFC------AQITPEQSKRS----------TMVGT 179
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD---LRA 283
+MAPE++ ++ + K D++S GI E++ G PY + LRA
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 82 VYEATLDGRKVAVKKPILST--SEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFF 139
VY+A V ++ T EEL+++ E+ +L DHP + K + A N
Sbjct: 26 VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL 85
Query: 140 FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
EF + + E + Q+ ++ Q AL YLH+ I+HRD+K N+L +
Sbjct: 86 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG 145
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL-----KKEI 254
LADFG +S KN R+ + F +GT +MAPE++ K
Sbjct: 146 DIKLADFG----------VSAKNTRTXIQRRDSF-----IGTPYWMAPEVVMCETSKDRP 190
Query: 255 HSEKSDVYSFGISINELLTGVVPYTDL 281
+ K+DV+S GI++ E+ P+ +L
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK +++L +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------------ 200
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 246
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 247 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 48/293 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK +++L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------------ 202
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 248
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVL 353
++ G L+P P + ++ +CW RPSFS++ + +
Sbjct: 249 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 48/293 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK +++L +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKF 159
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------------ 207
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 253
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVL 353
++ G L+P P + ++ +CW RPSFS++ + +
Sbjct: 254 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 300
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 88 DGRKVA---VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE 144
+GR A +KK I+ +++++ + E +L + HP + + ++ E
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89
Query: 145 SRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLA 204
L L + P+ AA++ AL+YLH+ I++RD+KP N+LLD+N +
Sbjct: 90 GGELFSLLRKSQRFPN-PVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKIT 148
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSF 264
DFG A+Y ++ + GT Y+APE++ + +++ D +SF
Sbjct: 149 DFGFAKYVPDV-------------------TYXLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
Query: 265 GISINELLTGVVPYTD 280
GI I E+L G P+ D
Sbjct: 190 GILIYEMLAGYTPFYD 205
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 48/293 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK +++L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------------ 202
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 248
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVL 353
++ G L+P P + ++ +CW RPSFS++ + +
Sbjct: 249 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 295
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 40/248 (16%)
Query: 105 LDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQ 163
++ ++E+ +L KLDHP + K V PN + +E N + V P S DQ
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 164 VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLA-EYRENLKEISLKN 222
L K ++YLH I+HRD+KP+N+L+ + +ADFG++ E++ + +S
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS--- 195
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILK--KEIHSEKS-DVYSFGISINELLTGVVPYT 279
N VGT +MAPE L ++I S K+ DV++ G+++ + G P+
Sbjct: 196 --------------NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
D R ++ + + +P +A + LI R D NP +R
Sbjct: 242 DERIMC----------LHSKIKSQALEFPDQPDIAE-------DLKDLITRMLDKNPESR 284
Query: 340 PSFSDIAL 347
+I L
Sbjct: 285 IVVPEIKL 292
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T E+L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 211 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 296
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 297 HAVPSQRPTFKQLVEDLDRIL 317
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P YT I +GA VY A G++VA+++ L + + E+ ++ + +P
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ ++ ++ E+ +L + V E Q+ + + +AL++LH+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+K N+LL + L DFG +I+ + + S MVGT
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFC------AQITPEQSKRS----------EMVGT 179
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD---LRA 283
+MAPE++ ++ + K D++S GI E++ G PY + LRA
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 48/293 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK +++L +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKF 213
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------------ 261
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 307
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVL 353
++ G L+P P + ++ +CW RPSFS++ + +
Sbjct: 308 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 29/225 (12%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILS---TSEELDNFHKELQLLCKLDH 120
P +T L I +G+ VY+ + K V I+ +E+++ +E+ +L + D
Sbjct: 17 PEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 76
Query: 121 PGLAKFVAAHAKPPNYMFFFEFY---ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQY 177
P + ++ ++ K E+ + +L + +EE + I ++ K L Y
Sbjct: 77 PYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEE-----TYIATILREILKGLDY 131
Query: 178 LHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKN 237
LH+ +HRD+K ANVLL LADFG+A G+ T K+N
Sbjct: 132 LHSERKIHRDIKAANVLLSEQGDVKLADFGVA-----------------GQLTDTQIKRN 174
Query: 238 -MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
VGT +MAPE++K+ + K+D++S GI+ EL G P +DL
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 74 IARGAESVVYEATL---DGRKV--AVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
I RG VY TL DG+K+ AVK ++ E+ F E ++ HP + +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 128 A----AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ P + + + + RN E +P+V ++ Q+AK +++L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
VHRD+ N +LD +ADFGLA + + S+ N + P
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK------------ 203
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
+MA E L+ + + KSDV+SFG+ + EL+T G PY D+ +T
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--------------FDITV 249
Query: 303 AVVSGG--LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++ G L+P P + ++ +CW RPSFS++
Sbjct: 250 YLLQGRRLLQPEYC------PDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 41/277 (14%)
Query: 74 IARGAESVVYEAT-LDGRKV----AVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVA 128
+ +G + YE T +D ++V V K +L + + E+ + LD+P + F
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 129 AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E R+L E LH + + + Q + +QYLHN ++HRD+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 189 KPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPE 248
K N+ L+ ++ + DFGLA E G KK++ GT Y+APE
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKDLCGTPNYIAPE 196
Query: 249 ILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG 308
+L K+ HS + D++S G + LL G P+ + L+ Y + V
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFET--------SCLKETYIRIKKNEYSVPRH 248
Query: 309 LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ P+ + +LI+R +P RPS +++
Sbjct: 249 INPVAS-----------ALIRRMLHADPTLRPSVAEL 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P YT I +GA VY A G++VA+++ L + + E+ ++ + +P
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ ++ ++ E+ +L + V E Q+ + + +AL++LH+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+K N+LL + L DFG +I+ + + S MVGT
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFC------AQITPEQSKRS----------XMVGT 179
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD---LRA 283
+MAPE++ ++ + K D++S GI E++ G PY + LRA
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 41/277 (14%)
Query: 74 IARGAESVVYEAT-LDGRKV----AVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVA 128
+ +G + YE T +D ++V V K +L + + E+ + LD+P + F
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 129 AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E R+L E LH + + + Q + +QYLHN ++HRD+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 189 KPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPE 248
K N+ L+ ++ + DFGLA E G KK++ GT Y+APE
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKDLCGTPNYIAPE 212
Query: 249 ILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG 308
+L K+ HS + D++S G + LL G P+ + L+ Y + V
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFET--------SCLKETYIRIKKNEYSVPRH 264
Query: 309 LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ P+ + +LI+R +P RPS +++
Sbjct: 265 INPVAS-----------ALIRRMLHADPTLRPSVAEL 290
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P YT I +GA VY A G++VA+++ L + + E+ ++ + +P
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ ++ ++ E+ +L + V E Q+ + + +AL++LH+
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HRD+K N+LL + L DFG +I+ + + S MVGT
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFC------AQITPEQSKRS----------XMVGT 180
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD---LRA 283
+MAPE++ ++ + K D++S GI E++ G PY + LRA
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 133/325 (40%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 71 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 186
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A+ +R+S +++K L +M PE + I + K+D +
Sbjct: 187 DFGMAQ----------DIYRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 231 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 271
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 272 PGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 66 SSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQL---LCKL-D 119
S Y L + +GA SVV L G++ A K I++T + H++L+ +C+L
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAK--IINTKKLSARDHQKLEREARICRLLK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
HP + + + ++ ++ F+ L E + E+ D I Q+ +A+ + H
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAVLHCH 138
Query: 180 NLGIVHRDVKPANVLLDRNL---CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+G+VHRD+KP N+LL L LADFGLA E G+ F
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-------------GEQQAWF--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+L+K+ + + D+++ G+ + LL G P+ D
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 226
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P + ++ + GA VY+A G A K + EEL+++ E+++L DHP
Sbjct: 9 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHP 68
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + A+ EF + + + + Q+ ++ Q+ +AL +LH+
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
I+HRD+K NVL+ LADFG +S KN ++ K + + +GT
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFG----------VSAKNLKTLQK------RDSFIGT 172
Query: 242 LIYMAPEI-----LKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
+MAPE+ +K + K+D++S GI++ E+ P+ +L
Sbjct: 173 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 135/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 11 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 71 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 186
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 187 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 231 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 271
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 272 PGPVYRIMTQCWQHQPEDRPNFAII 296
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 41/277 (14%)
Query: 74 IARGAESVVYEAT-LDGRKV----AVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVA 128
+ +G + YE T +D ++V V K +L + + E+ + LD+P + F
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 129 AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E R+L E LH + + + Q + +QYLHN ++HRD+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 189 KPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPE 248
K N+ L+ ++ + DFGLA E G KK + GT Y+APE
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKTLCGTPNYIAPE 212
Query: 249 ILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG 308
+L K+ HS + D++S G + LL G P+ + L+ Y + V
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFET--------SCLKETYIRIKKNEYSVPRH 264
Query: 309 LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ P+ + +LI+R +P RPS +++
Sbjct: 265 INPVAS-----------ALIRRMLHADPTLRPSVAEL 290
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P + ++ + GA VY+A G A K + EEL+++ E+++L DHP
Sbjct: 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHP 76
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + A+ EF + + + + Q+ ++ Q+ +AL +LH+
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
I+HRD+K NVL+ LADFG +S KN ++ K + + +GT
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFG----------VSAKNLKTLQK------RDSFIGT 180
Query: 242 LIYMAPEI-----LKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
+MAPE+ +K + K+D++S GI++ E+ P+ +L
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 135/325 (41%), Gaps = 64/325 (19%)
Query: 46 PNTCIRGCCSSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKK-- 96
PN G SS S +P + TL+ + GA VYE + G +VAVK
Sbjct: 17 PNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 76
Query: 97 PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE 156
+ S +ELD F E ++ K +H + + + + E +L L
Sbjct: 77 EVCSEQDELD-FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 135
Query: 157 WSPS------VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP------HLA 204
PS + +L +A +A QYL +HRD+ N LL CP +
Sbjct: 136 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT---CPGPGRVAKIG 192
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVY 262
DFG+A ++I +R+S +++K L +M PE + I + K+D +
Sbjct: 193 DFGMA------RDI----YRAS------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
Query: 263 SFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGL 320
SFG+ + E+ + G +PY + + Q++ V SGG + P
Sbjct: 237 SFGVLLWEIFSLGYMPYP--------------SKSNQEVLEFVTSGGRMDP-----PKNC 277
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
P + ++ +CW P +RP+F+ I
Sbjct: 278 PGPVYRIMTQCWQHQPEDRPNFAII 302
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 147/360 (40%), Gaps = 69/360 (19%)
Query: 16 FVRKTQVLLSSKYGLQ-----FFTLNSKMGLKVLEPNTCIRGCCSSQSIPLHLPPSSYTL 70
+ RK Q L + + LQ L + + PN G SS S +P + TL
Sbjct: 2 YRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITL 61
Query: 71 LSPIARGAESVVYEATLDGR-------KVAVKK--PILSTSEELDNFHKELQLLCKLDHP 121
+ + GA VYE + G +VAVK + S +ELD F E ++ K +H
Sbjct: 62 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQ 120
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS------VDQVLMIAAQLAKAL 175
+ + + + E +L L PS + +L +A +A
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCP------HLADFGLAEYRENLKEISLKNWRSSGKP 229
QYL +HRD+ N LL CP + DFG+A ++I +R+S
Sbjct: 181 QYLEENHFIHRDIAARNCLLT---CPGPGRVAKIGDFGMA------RDI----YRAS--- 224
Query: 230 TGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQ 286
+++K L +M PE + I + K+D +SFG+ + E+ + G +PY
Sbjct: 225 ---YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP------- 274
Query: 287 AHTVLEMNYTEQQLTAAVVSGG-LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ + Q++ V SGG + P P + ++ +CW P +RP+F+ I
Sbjct: 275 -------SKSNQEVLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAII 322
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 78 AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPP 134
E ++ + + G++ AVK K + + ++ +E+QLL +LDHP + K
Sbjct: 40 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKG 99
Query: 135 NYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL 194
+ E Y L +++ + VD +I Q+ + Y H IVHRD+KP N+L
Sbjct: 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR-QVLSGITYXHKNKIVHRDLKPENLL 158
Query: 195 LD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
L+ ++ + DFGL+ + E K+ K+ +GT Y+APE+L
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEASKK-----------------XKDKIGTAYYIAPEVLH 201
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ EK DV+S G+ + LL+G P+
Sbjct: 202 G-TYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 27/202 (13%)
Query: 88 DGRKVAVKKPILSTSEELD-----NFHKELQLLCKLDHPGL-AKFVAAHAKPPN---YMF 138
D R VAVK +L D F +E Q L+HP + A + A+ P
Sbjct: 36 DHRDVAVK--VLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 139 FFEFYESRNLAEKLHVE-EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDR 197
E+ + L + +H E +P + + + A +AL + H GI+HRDVKPAN+L+
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPK--RAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 198 NLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSE 257
+ DFG+A ++ + +S T ++GT Y++PE + +
Sbjct: 152 TNAVKVVDFGIAR--------AIADSGNSVXQTAA-----VIGTAQYLSPEQARGDSVDA 198
Query: 258 KSDVYSFGISINELLTGVVPYT 279
+SDVYS G + E+LTG P+T
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 60 PLHLPPSSYTLLSPIARGAESVVYE---------ATLDGRKVAVKKPILSTSEELDNFHK 110
P + P + LL + +G V++ + KV K I+ +++ +
Sbjct: 11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 111 ELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQ 170
E +L ++ HP + + A E+ L +L E D A+
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTACFYLAE 129
Query: 171 LAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
++ AL +LH GI++RD+KP N++L+ L DFGL +E++ + ++ +
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC--KESIHDGTVTH-------- 179
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
GT+ YMAPEIL + H+ D +S G + ++LTG P+T
Sbjct: 180 ------TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 66 SSYTLLSPIARGAESVVYEAT--LDGRKVAVKK----PILSTSEELDNFHKELQLLCKLD 119
+++ + I RG S VY A LDG VA+KK ++ D KE+ LL +L+
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI-KEIDLLKQLN 90
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL-HVEEWSPSVDQ--VLMIAAQLAKALQ 176
HP + K+ A+ + E ++ +L+ + H ++ + + V QL AL+
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++H+ ++HRD+KPANV + L D GL + S K T
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF-------------FSSKTTAA---H 194
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
++VGT YM+PE + + ++ KSD++S G + E+ P+
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAA 169
+E++LL KLDHP + K ++ E Y L +++ ++ S I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIK 128
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLL---DRNLCPHLADFGLAE-YRENLKEISLKNWRS 225
Q+ + Y+H IVHRD+KP N+LL +++ + DFGL+ +++N K
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--------- 179
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
K+ +GT Y+APE+L+ + EK DV+S G+ + LL+G P+
Sbjct: 180 ---------MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 60 PLHLPPSSYTLLSPIARGAESVVYE---------ATLDGRKVAVKKPILSTSEELDNFHK 110
P + P + LL + +G V++ + KV K I+ +++ +
Sbjct: 11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 111 ELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQ 170
E +L ++ HP + + A E+ L +L E D A+
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTACFYLAE 129
Query: 171 LAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
++ AL +LH GI++RD+KP N++L+ L DFGL +E++ + G T
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC--KESIHD---------GTVT 178
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
F GT+ YMAPEIL + H+ D +S G + ++LTG P+T
Sbjct: 179 HXF-----CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 41/277 (14%)
Query: 74 IARGAESVVYEAT-LDGRKV----AVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVA 128
+ +G + YE T +D ++V V K +L + + E+ + LD+P + F
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 129 AHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E R+L E LH + + + Q + +QYLHN ++HRD+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 189 KPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPE 248
K N+ L+ ++ + DFGLA E G KK + GT Y+APE
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIE----------------FDGERKKXLCGTPNYIAPE 212
Query: 249 ILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGG 308
+L K+ HS + D++S G + LL G P+ + L+ Y + V
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFET--------SCLKETYIRIKKNEYSVPRH 264
Query: 309 LRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ P+ + +LI+R +P RPS +++
Sbjct: 265 INPVAS-----------ALIRRMLHADPTLRPSVAEL 290
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 74 IARGAESVVYEATLD--GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
I G+ +V AT G++VAVKK L + + E+ ++ H + +++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
EF E L + V + +Q+ + + +AL YLHN G++HRD+K
Sbjct: 113 VGDELWVVMEFLEGGALTDI--VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
++LL + L+DFG + KE+ +K +VGT +MAPE++
Sbjct: 171 SILLTSDGRIKLSDFGFCA--QVSKEVP--------------KRKXLVGTPYWMAPEVIS 214
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ + + D++S GI + E++ G PY
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 211 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 296
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 297 HAVPSQRPTFKQLVEDLDRIL 317
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 41/230 (17%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVK---------KPILSTSEELDNFHKELQLLC 116
Y L I +GA SVV G++ AVK P LST ++ +E +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST----EDLKREASICH 81
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE-----WSPSVDQVLMIAAQL 171
L HP + + + ++ FEF + +L ++ +S +V M Q+
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM--RQI 139
Query: 172 AKALQYLHNLGIVHRDVKPANVLL--DRNLCP-HLADFGLAEYRENLKEISLKNWRSSGK 228
+AL+Y H+ I+HRDVKP NVLL N P L DFG+A I L SG
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--------IQLGE---SGL 188
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
GG VGT +MAPE++K+E + + DV+ G+ + LL+G +P+
Sbjct: 189 VAGG-----RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAA 169
+E++LL KLDHP + K ++ E Y L +++ ++ S I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIK 128
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLL---DRNLCPHLADFGLAE-YRENLKEISLKNWRS 225
Q+ + Y+H IVHRD+KP N+LL +++ + DFGL+ +++N K
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--------- 179
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
K+ +GT Y+APE+L+ + EK DV+S G+ + LL+G P+
Sbjct: 180 ---------MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAA 169
+E++LL KLDHP + K ++ E Y L +++ ++ S I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIK 128
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLL---DRNLCPHLADFGLAE-YRENLKEISLKNWRS 225
Q+ + Y+H IVHRD+KP N+LL +++ + DFGL+ +++N K
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--------- 179
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
K+ +GT Y+APE+L+ + EK DV+S G+ + LL+G P+
Sbjct: 180 ---------MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 211 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 296
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 297 HAVPSQRPTFKQLVEDLDRIL 317
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 108 FHKELQLLCKLDHPGL-AKFVAAHAKPPNY---MFFFEFYESRNLAEKLHVE-EWSPSVD 162
F +E Q L+HP + A + A+ P E+ + L + +H E +P
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-- 116
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ + + A +AL + H GI+HRDVKPAN+++ + DFG+A ++ +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------AIAD 168
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
+S T ++GT Y++PE + + +SDVYS G + E+LTG P+T
Sbjct: 169 SGNSVTQTAA-----VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARG-------AESVVYEATLDGRKVAVKKPIL---STSEELDNFHKE 111
P TL P+ G AE+V + V V +L +T ++L + E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 203 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 247 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 288
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 289 HAVPSQRPTFKQLVEDLDRIL 309
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVY------EATLDGRKVAVKKPILSTSEELDNFHKELQLL 115
H PS + L I +G+ V E KV KK IL EE + LL
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE--WSPSVDQVLMIAAQLAK 173
+ HP L + F ++ L L E P + AA++A
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP---RARFYAAEIAS 150
Query: 174 ALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
AL YLH+L IV+RD+KP N+LLD L DFGL +EN++ S +
Sbjct: 151 ALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC--KENIEHNSTTS----------- 197
Query: 234 HKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
GT Y+APE+L K+ + D + G + E+L G+ P+
Sbjct: 198 ---TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 64 PPSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
P YT I +GA VY A G++VA+++ L + + E+ ++ + +P
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ ++ ++ E+ +L + V E Q+ + + +AL++LH+
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
++HR++K N+LL + L DFG +I+ + + S MVGT
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFC------AQITPEQSKRS----------TMVGT 180
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD---LRA 283
+MAPE++ ++ + K D++S GI E++ G PY + LRA
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 225
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARG-------AESVVYEATLDGRKVAVKKPIL---STSEELDNFHKE 111
P TL P+ G AE+V + V V +L +T ++L + E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 200 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 244 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 285
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 286 HAVPSQRPTFKQLVEDLDRIL 306
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 30/237 (12%)
Query: 55 SSQSIPLHLPPSSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELD-----N 107
S + P HL Y L + G S V+ A D R VAVK +L D
Sbjct: 2 SHMTTPSHLS-DRYELGEILGFGGMSEVHLARDLRDHRDVAVK--VLRADLARDPSFYLR 58
Query: 108 FHKELQLLCKLDHPGL-AKFVAAHAKPPNY---MFFFEFYESRNLAEKLHVE-EWSPSVD 162
F +E Q L+HP + A + A+ P E+ + L + +H E +P
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-- 116
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ + + A +AL + H GI+HRDVKPAN+++ + DFG+A ++ +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------AIAD 168
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
+S T ++GT Y++PE + + +SDVYS G + E+LTG P+T
Sbjct: 169 SGNSVTQTAA-----VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARG-------AESVVYEATLDGRKVAVKKPIL---STSEELDNFHKE 111
P TL P+ G AE+V + V V +L +T ++L + E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 198 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 242 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 283
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 284 HAVPSQRPTFKQLVEDLDRIL 304
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 27/202 (13%)
Query: 88 DGRKVAVKKPILSTSEELD-----NFHKELQLLCKLDHPGL-AKFVAAHAKPPN---YMF 138
D R VAVK +L D F +E Q L+HP + A + A+ P
Sbjct: 36 DHRDVAVK--VLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 139 FFEFYESRNLAEKLHVE-EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDR 197
E+ + L + +H E +P + + + A +AL + H GI+HRDVKPAN+++
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPK--RAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 198 NLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSE 257
+ DFG+A ++ + +S T ++GT Y++PE + +
Sbjct: 152 TNAVKVMDFGIAR--------AIADSGNSVTQTAA-----VIGTAQYLSPEQARGDSVDA 198
Query: 258 KSDVYSFGISINELLTGVVPYT 279
+SDVYS G + E+LTG P+T
Sbjct: 199 RSDVYSLGCVLYEVLTGEPPFT 220
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARG-------AESVVYEATLDGRKVAVKKPIL---STSEELDNFHKE 111
P TL P+ G AE+V + V V +L +T ++L + E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 257 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 301 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 342
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 343 HAVPSQRPTFKQLVEDLDRIL 363
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 59/261 (22%)
Query: 111 ELQLLCKLDHPGLAKFVAAHAKPPNYMFF--FEFYESRNLA--------EKLHVEEWSPS 160
E+ LL +L HP + ++ N + E+ E +LA E+ +++E
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE---- 110
Query: 161 VDQVLMIAAQLAKALQYLHNLG-----IVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ VL + QL AL+ H ++HRD+KPANV LD L DFGLA +
Sbjct: 111 -EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGV 275
++ + K VGT YM+PE + + ++EKSD++S G + EL +
Sbjct: 170 EDFA----------------KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLR--PILASLELGLPASILSLIQRCWD 333
P+T +++++L + G R P S EL +I R +
Sbjct: 214 PPFT--------------AFSQKELAGKIREGKFRRIPYRYSDELN------EIITRMLN 253
Query: 334 GNPHNRPSFSDIALELDLVLE 354
++RPS +I LE L+LE
Sbjct: 254 LKDYHRPSVEEI-LENPLILE 273
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 211 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 296
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 297 HAVPSQRPTFKQLVEDLDRIL 317
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 146/320 (45%), Gaps = 37/320 (11%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEATL-DGRKVAVK--KPILSTSEELDNFHKELQLLCK 117
L + +++ + + RG VY+ L DG VAVK K EL F E++++
Sbjct: 33 LQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL-QFQTEVEMISM 91
Query: 118 LDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-EWSPSVD--QVLMIAAQLAKA 174
H L + P + + + + ++A L E P +D + IA A+
Sbjct: 92 AVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG 151
Query: 175 LQYLHNL---GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
L YLH+ I+HRDVK AN+LLD + DFGLA+ L +++
Sbjct: 152 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK---------LMDYKDX----- 197
Query: 232 GFHKKNMV-GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTV 290
H V GT+ ++APE L SEK+DV+ +G+ + EL+TG + DL A V
Sbjct: 198 --HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF-DLARLANDDDV 254
Query: 291 LEMNYT----EQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
+ +++ +++ A+V L+ E+ ++ + C +P RP S++
Sbjct: 255 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV---EQLIQVALLCTQSSPMERPKMSEVV 311
Query: 347 --LELDLVLEHRKSLKEEDL 364
LE D + E + ++E++
Sbjct: 312 RMLEGDGLAERWEEWQKEEM 331
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 59/261 (22%)
Query: 111 ELQLLCKLDHPGLAKFVAAHAKPPNYMFF--FEFYESRNLA--------EKLHVEEWSPS 160
E+ LL +L HP + ++ N + E+ E +LA E+ +++E
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE---- 110
Query: 161 VDQVLMIAAQLAKALQYLHNLG-----IVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ VL + QL AL+ H ++HRD+KPANV LD L DFGLA
Sbjct: 111 -EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----- 164
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGV 275
+ N +S K VGT YM+PE + + ++EKSD++S G + EL +
Sbjct: 165 ----ILNHDTS-------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLR--PILASLELGLPASILSLIQRCWD 333
P+T +++++L + G R P S EL +I R +
Sbjct: 214 PPFT--------------AFSQKELAGKIREGKFRRIPYRYSDELN------EIITRMLN 253
Query: 334 GNPHNRPSFSDIALELDLVLE 354
++RPS +I LE L+LE
Sbjct: 254 LKDYHRPSVEEI-LENPLILE 273
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 35/291 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L+ + G V+ + K + + + F +E L+ L H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSV-DQVLMIAAQLAKALQYLHN 180
L + A + E+ +L + L +E + +++ +AQ+A+ + Y+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+HRD++ ANVL+ +L +ADFGLA E+ + + + F K
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--------YTAREGAKFPIK---- 176
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + + KSDV+SFGI + E++T G +PY R A T L Y +
Sbjct: 177 ---WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPG-RTNADVMTALSQGYRMPR 232
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
+ P + +++ CW RP+F + LD
Sbjct: 233 VE-----------------NCPDELYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 74 IARGAESVVYEATLDG-------RKVAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAK 125
I GA V++A G VAVK S ++ +F +E L+ + D+P + K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 126 F--VAAHAKPPNYMFFFEFYESRN------------------LAEKLHVEEWSP---SVD 162
V A KP +F + Y N L+ + V P S
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ L IA Q+A + YL VHRD+ N L+ N+ +ADFGL+ S
Sbjct: 175 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR-----NIYSADY 229
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDL 281
+++ G N + +M PE + ++ +SDV+++G+ + E+ + G+ PY +
Sbjct: 230 YKADG---------NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280
Query: 282 RAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPS 341
E + V + N ILA E P + +L++ CW P +RPS
Sbjct: 281 AHEEVIYYVRDGN-----------------ILACPE-NCPLELYNLMRLCWSKLPADRPS 322
Query: 342 FSDI 345
F I
Sbjct: 323 FCSI 326
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 35/291 (12%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHP 121
+P S L+ + G V+ + K + + + F +E L+ L H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSV-DQVLMIAAQLAKALQYLHN 180
L + A K EF +L + L +E + +++ +AQ+A+ + Y+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+HRD++ ANVL+ +L +ADFGLA E+ + + + F K
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--------YTAREGAKFPIK---- 175
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE + + KS+V+SFGI + E++T G +PY R A + L Y +
Sbjct: 176 ---WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPG-RTNADVMSALSQGYRMPR 231
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
+ P + +++ CW RP+F + LD
Sbjct: 232 ME-----------------NCPDELYDIMKMCWKEKAEERPTFDYLQSVLD 265
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 68 YTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLA 124
Y L + G VVY+A GR VA+K+ L +E +E+ LL +L HP +
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ FEF E ++L + L + Q+ + QL + + + H I+
Sbjct: 83 SLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
HRD+KP N+L++ + LADFGLA R+ G P + + V TL Y
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLA--------------RAFGIPVRSYTHE--VVTLWY 185
Query: 245 MAPEILK-KEIHSEKSDVYSFGISINELLTG 274
AP++L + +S D++S G E++TG
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 68 YTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLA 124
Y L + G VVY+A GR VA+K+ L +E +E+ LL +L HP +
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ FEF E ++L + L + Q+ + QL + + + H I+
Sbjct: 83 SLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
HRD+KP N+L++ + LADFGLA R+ G P + + V TL Y
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLA--------------RAFGIPVRSYTHE--VVTLWY 185
Query: 245 MAPEILK-KEIHSEKSDVYSFGISINELLTG 274
AP++L + +S D++S G E++TG
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 45/310 (14%)
Query: 55 SSQSIPLHLPPSSYTLLSPIARGAESVVYEATLD---GRKVAV-----KKPILSTSEELD 106
SQS+ + LL + G+ VV D G+ V+V K +LS E +D
Sbjct: 1 GSQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 60
Query: 107 NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
+F +E+ + LDH L + PP M E +L ++L + + +
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRS 225
A Q+A+ + YL + +HRD+ N+LL + DFGL +N ++
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE--- 176
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAE 284
H+K + APE LK S SD + FG+++ E+ T G P+ L
Sbjct: 177 --------HRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 285 AQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
H + + ++L RP P I +++ +CW P +RP+F
Sbjct: 226 QILHKI---DKEGERLP--------RP------EDCPQDIYNVMVQCWAHKPEDRPTF-- 266
Query: 345 IALELDLVLE 354
+AL D +LE
Sbjct: 267 VALR-DFLLE 275
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 64 PPSSYTLLSPIARGAESVVYEATLDGRK---VAVKK-PILSTSEELDNFHKELQLLCKLD 119
P +T L I +G+ V++ +D R VA+K + +E+++ +E+ +L + D
Sbjct: 21 PEELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
+ K+ ++ K E+ + + L + Q+ + ++ K L YLH
Sbjct: 80 SSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF--QIATMLKEILKGLDYLH 137
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKN-M 238
+ +HRD+K ANVLL LADFG+A G+ T K+N
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVA-----------------GQLTDTQIKRNTF 180
Query: 239 VGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
VGT +MAPE++++ + K+D++S GI+ EL G P +D+
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 59/261 (22%)
Query: 111 ELQLLCKLDHPGLAKFVAAHAKPPNYMFF--FEFYESRNLA--------EKLHVEEWSPS 160
E+ LL +L HP + ++ N + E+ E +LA E+ +++E
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE---- 110
Query: 161 VDQVLMIAAQLAKALQYLHNLG-----IVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ VL + QL AL+ H ++HRD+KPANV LD L DFGLA
Sbjct: 111 -EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----- 164
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGV 275
+ N +S K VGT YM+PE + + ++EKSD++S G + EL +
Sbjct: 165 ----ILNHDTS-------FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLR--PILASLELGLPASILSLIQRCWD 333
P+T +++++L + G R P S EL +I R +
Sbjct: 214 PPFT--------------AFSQKELAGKIREGKFRRIPYRYSDELN------EIITRMLN 253
Query: 334 GNPHNRPSFSDIALELDLVLE 354
++RPS +I LE L+LE
Sbjct: 254 LKDYHRPSVEEI-LENPLILE 273
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 108 FHKELQLLCKLDHPGL-AKFVAAHAKPPNY---MFFFEFYESRNLAEKLHVE-EWSPSVD 162
F +E Q L+HP + A + A+ P E+ + L + +H E +P
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-- 116
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ + + A +AL + H GI+HRDVKPAN+++ + DFG+A ++ +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------AIAD 168
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
+S T ++GT Y++PE + + +SDVYS G + E+LTG P+T
Sbjct: 169 SGNSVTQTAA-----VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 108 FHKELQLLCKLDHPGL-AKFVAAHAKPPNY---MFFFEFYESRNLAEKLHVE-EWSPSVD 162
F +E Q L+HP + A + A+ P E+ + L + +H E +P
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK-- 133
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ + + A +AL + H GI+HRDVKPAN+++ + DFG+A ++ +
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------AIAD 185
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
+S T ++GT Y++PE + + +SDVYS G + E+LTG P+T
Sbjct: 186 SGNSVTQTAA-----VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 237
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 45/310 (14%)
Query: 55 SSQSIPLHLPPSSYTLLSPIARGAESVVYEATLD---GRKVAV-----KKPILSTSEELD 106
SQS+ + LL + G+ VV D G+ V+V K +LS E +D
Sbjct: 1 GSQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD 60
Query: 107 NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
+F +E+ + LDH L + PP M E +L ++L + + +
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRS 225
A Q+A+ + YL + +HRD+ N+LL + DFGL +N ++
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE--- 176
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAE 284
H+K + APE LK S SD + FG+++ E+ T G P+ L
Sbjct: 177 --------HRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 225
Query: 285 AQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSD 344
H + + ++L RP P I +++ +CW P +RP+F
Sbjct: 226 QILHKI---DKEGERLP--------RPE------DCPQDIYNVMVQCWAHKPEDRPTF-- 266
Query: 345 IALELDLVLE 354
+AL D +LE
Sbjct: 267 VALR-DFLLE 275
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 74 IARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
+ +G +VY + ++A+K+ S H+E+ L L H + +++ + +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA---AQLAKALQYLHNLGIVHRDV 188
+ F E +L+ L +W P D I Q+ + L+YLH+ IVHRD+
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 189 KPANVLLDR-NLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
K NVL++ + ++DFG ++ + + + GTL YMAP
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAGINPCT----------------ETFTGTLQYMAP 192
Query: 248 EILKK--EIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVV 305
EI+ K + + +D++S G +I E+ TG P+ +L E Q AA+
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL-GEPQ---------------AAMF 236
Query: 306 SGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRK 357
G+ + + + A + I +C++ +P R +D+ ++ L + +K
Sbjct: 237 KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKK 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 42/278 (15%)
Query: 74 IARGAESVVY--EATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVA 128
+ +G+ + VY E+ G +VA+K K + + + E+++ C+L HP + + +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILE-LY 77
Query: 129 AHAKPPNYMFF-FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ + NY++ E + + L S ++ Q+ + YLH+ GI+HRD
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRD 137
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+ +N+LL RN+ +ADFGLA LK K++ G P Y++P
Sbjct: 138 LTLSNLLLTRNMNIKIADFGLA---TQLKMPHEKHYTLCGTPN-------------YISP 181
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSG 307
EI + H +SDV+S G LL G P+ + + + L V++
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPF-------------DTDTVKNTLNKVVLAD 228
Query: 308 GLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
P S+E LI + NP +R S S +
Sbjct: 229 YEMPSFLSIEAK------DLIHQLLRRNPADRLSLSSV 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++K G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 211 D----------------YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 296
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 297 HAVPSQRPTFKQLVEDLDRIL 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 140/307 (45%), Gaps = 37/307 (12%)
Query: 74 IARGAESVVYEATL-DGRKVAVK--KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAH 130
+ RG VY+ L DG VAVK K + EL F E++++ H L +
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL-QFQTEVEMISMAVHRNLLRLRGFC 96
Query: 131 AKPPNYMFFFEFYESRNLAEKLHVE-EWSPSVD--QVLMIAAQLAKALQYLHNL---GIV 184
P + + + + ++A L E P +D + IA A+ L YLH+ I+
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 156
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV-GTLI 243
HRDVK AN+LLD + DFGLA+ L +++ H V G +
Sbjct: 157 HRDVKAANILLDEEFEAVVGDFGLAK---------LMDYKDX-------HVXXAVRGXIG 200
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYT----EQQ 299
++APE L SEK+DV+ +G+ + EL+TG + DL A V+ +++ +++
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF-DLARLANDDDVMLLDWVKGLLKEK 259
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA--LELDLVLEHRK 357
A+V L+ E+ ++ + C +P RP S++ LE D + E +
Sbjct: 260 KLEALVDVDLQGNYKDEEV---EQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWE 316
Query: 358 SLKEEDL 364
++E++
Sbjct: 317 EWQKEEM 323
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILST----SEELDNFHKELQLLCKLDHPG 122
+Y + + +GA SVV + I++T + + +E ++ KL HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
+ + + + + F+ L E + E+ D I Q+ +++ Y H+ G
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHSNG 148
Query: 183 IVHRDVKPANVLLD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
IVHR++KP N+LL + LADFGLA ++ + W GF
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWH-------GF-----A 191
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+LKK+ +S+ D+++ G+ + LL G P+ D
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + + NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 211 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 296
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 297 HAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 63/321 (19%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + + NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA N+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT 273
++KK G L +MAPE L +++ +SDV+SFG+ + E+ T
Sbjct: 211 D----------------YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 274 -GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCW 332
G PY + E + E + + +P + EL + +++ CW
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCW 296
Query: 333 DGNPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 297 HAVPSQRPTFKQLVEDLDRIL 317
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILST----SEELDNFHKELQLLCKLDHPG 122
+Y + + +GA SVV + I++T + + +E ++ KL HP
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
+ + + + + F+ L E + E+ D I Q+ +++ Y H+ G
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHSNG 124
Query: 183 IVHRDVKPANVLLD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
IVHR++KP N+LL + LADFGLA ++ + W GF
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWH-------GF-----A 167
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+LKK+ +S+ D+++ G+ + LL G P+ D
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 84 EATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFF 140
E L G KVAVK + + + + + +E+Q L HP + K + P ++
Sbjct: 31 EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90
Query: 141 EFYESRNLAEKL----HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD 196
E+ L + + VEE + + Q+ A+ Y H +VHRD+KP NVLLD
Sbjct: 91 EYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 197 RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHS 256
++ +ADFGL+ N S G+ ++ G+ Y APE++ +++
Sbjct: 146 AHMNAKIADFGLS------------NMMSDGE-----FLRDSCGSPNYAAPEVISGRLYA 188
Query: 257 -EKSDVYSFGISINELLTGVVPYTD 280
+ D++S G+ + LL G +P+ D
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 74 IARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
+ +G +VY + ++A+K+ S H+E+ L L H + +++ + +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA---AQLAKALQYLHNLGIVHRDV 188
+ F E +L+ L +W P D I Q+ + L+YLH+ IVHRD+
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 189 KPANVLLDR-NLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
K NVL++ + ++DFG ++ + + + GTL YMAP
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCT----------------ETFTGTLQYMAP 178
Query: 248 EILKK--EIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVV 305
EI+ K + + +D++S G +I E+ TG P+ +L E Q AA+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL-GEPQ---------------AAMF 222
Query: 306 SGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALE 348
G+ + + + A + I +C++ +P R +D+ ++
Sbjct: 223 KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 265
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 57/316 (18%)
Query: 63 LPPSSYTLLSPIARGAESVVYEA-------TLDGRKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA T R VAVK +L +T E EL
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK--MLKEGATHSEHRALMSEL 81
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 142 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA---------- 191
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G PY
Sbjct: 192 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ + + L+ G R + + + P +++ CW G P
Sbjct: 248 PGVKIDEEFXRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHGEPSQ 290
Query: 339 RPSFSDIALELDLVLE 354
RP+FS++ L +L+
Sbjct: 291 RPTFSELVEHLGNLLQ 306
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILST----SEELDNFHKELQLLCKLDHPG 122
+Y + + +GA SVV + I++T + + +E ++ KL HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
+ + + + + F+ L E + E+ D I Q+ +++ Y H+ G
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHSNG 125
Query: 183 IVHRDVKPANVLLD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
IVHR++KP N+LL + LADFGLA ++ + W GF
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWH-------GF-----A 168
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+LKK+ +S+ D+++ G+ + LL G P+ D
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 45/308 (14%)
Query: 57 QSIPLHLPPSSYTLLSPIARGAESVVYEATLD---GRKVAV-----KKPILSTSEELDNF 108
QS+ + LL + G+ VV D G+ V+V K +LS E +D+F
Sbjct: 9 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 109 HKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA 168
+E+ + LDH L + PP M E +L ++L + + + A
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSG 227
Q+A+ + YL + +HRD+ N+LL + DFGL +N ++
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE----- 182
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQ 286
H+K + APE LK S SD + FG+++ E+ T G P+ L
Sbjct: 183 ------HRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
Query: 287 AHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
H + + ++L RP P I +++ +CW P +RP+F +A
Sbjct: 234 LHKI---DKEGERLP--------RPE------DCPQDIYNVMVQCWAHKPEDRPTF--VA 274
Query: 347 LELDLVLE 354
L D +LE
Sbjct: 275 LR-DFLLE 281
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 59/319 (18%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVE-----EWSPSVDQV- 164
++++ + H + + A + E+ NL E L E+S +++V
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 165 ---------LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----- 205
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
+ N K T G + +MAPE L +++ +SDV+SFG+ + E+ T G
Sbjct: 206 ---DINNIDXXKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY + E + E + + +P + EL + +++ CW
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCWHA 298
Query: 335 NPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 299 VPSQRPTFKQLVEDLDRIL 317
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 72
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 186
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 187 --------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 238
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 239 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 281
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 282 EPSQRPTFSELVEHLGNLLQ 301
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 45/308 (14%)
Query: 57 QSIPLHLPPSSYTLLSPIARGAESVVYEATLD---GRKVAV-----KKPILSTSEELDNF 108
QS+ + LL + G+ VV D G+ V+V K +LS E +D+F
Sbjct: 9 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 109 HKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA 168
+E+ + LDH L + PP M E +L ++L + + + A
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSG 227
Q+A+ + YL + +HRD+ N+LL + DFGL +N ++
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE----- 182
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQ 286
H+K + APE LK S SD + FG+++ E+ T G P+ L
Sbjct: 183 ------HRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
Query: 287 AHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
H + + ++L RP P I +++ +CW P +RP+F +A
Sbjct: 234 LHKI---DKEGERLP--------RPE------DCPQDIYNVMVQCWAHKPEDRPTF--VA 274
Query: 347 LELDLVLE 354
L D +LE
Sbjct: 275 LR-DFLLE 281
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 60/319 (18%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 25 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 82
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 83 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYK 142
Query: 160 ---SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------- 195
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 196 -------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGN 335
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 249 SPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHGE 291
Query: 336 PHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 292 PSQRPTFSELVEHLGNLLQ 310
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILST----SEELDNFHKELQLLCKLDHPG 122
+Y + + +GA SVV + I++T + + +E ++ KL HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
+ + + + + F+ L E + E+ D I Q+ +++ Y H+ G
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHSNG 125
Query: 183 IVHRDVKPANVLLD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
IVHR++KP N+LL + LADFGLA ++ + W GF
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWH-------GF-----A 168
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+LKK+ +S+ D+++ G+ + LL G P+ D
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 25/240 (10%)
Query: 58 SIPLHLPPSSYTLLSPIARGAESVVYEATLDGRKV-----AVKKPILSTSEELDNFHKEL 112
S+ + L + L + +G+ V+ A A+KK ++ ++++ E
Sbjct: 9 SLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 68
Query: 113 QLLC-KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQ 170
++L +HP L N F E+ +L H++ + + AA+
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLM--YHIQSCHKFDLSRATFYAAE 126
Query: 171 LAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
+ LQ+LH+ GIV+RD+K N+LLD++ +ADFG+ +EN+
Sbjct: 127 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC--KENM--------------L 170
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTV 290
G GT Y+APEIL + ++ D +SFG+ + E+L G P+ E H++
Sbjct: 171 GDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 57/316 (18%)
Query: 63 LPPSSYTLLSPIARGAESVVYEA-------TLDGRKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA T R VAVK +L +T E EL
Sbjct: 24 FPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK--MLKEGATHSEHRALMSEL 81
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 142 TLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA---------- 191
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G PY
Sbjct: 192 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ + + L+ G R + + + P +++ CW G P
Sbjct: 248 PGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHGEPSQ 290
Query: 339 RPSFSDIALELDLVLE 354
RP+FS++ L +L+
Sbjct: 291 RPTFSELVEHLGNLLQ 306
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 25/240 (10%)
Query: 58 SIPLHLPPSSYTLLSPIARGAESVVYEATLDGRKV-----AVKKPILSTSEELDNFHKEL 112
S+ + L + L + +G+ V+ A A+KK ++ ++++ E
Sbjct: 10 SLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 113 QLLC-KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSP-SVDQVLMIAAQ 170
++L +HP L N F E+ +L H++ + + AA+
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLM--YHIQSCHKFDLSRATFYAAE 127
Query: 171 LAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPT 230
+ LQ+LH+ GIV+RD+K N+LLD++ +ADFG+ +EN+
Sbjct: 128 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC--KENM--------------L 171
Query: 231 GGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTV 290
G GT Y+APEIL + ++ D +SFG+ + E+L G P+ E H++
Sbjct: 172 GDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 30/205 (14%)
Query: 84 EATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFF 140
E L G KVAVK + + + + + +E+Q L HP + K + P ++
Sbjct: 31 EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90
Query: 141 EFYESRNLAEKL----HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD 196
E+ L + + VEE + + Q+ A+ Y H +VHRD+KP NVLLD
Sbjct: 91 EYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 197 RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHS 256
++ +ADFGL+ N S G+ + G+ Y APE++ +++
Sbjct: 146 AHMNAKIADFGLS------------NMMSDGE-----FLRTSCGSPNYAAPEVISGRLYA 188
Query: 257 -EKSDVYSFGISINELLTGVVPYTD 280
+ D++S G+ + LL G +P+ D
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQL---LCKL-DHP 121
Y L + +GA SVV L G++ A I++T + H++L+ +C+L HP
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAM--IINTKKLSARDHQKLEREARICRLLKHP 70
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ + + ++ ++ F+ L E + E+ D I Q+ +A+ + H +
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAVLHCHQM 129
Query: 182 GIVHRDVKPANVLLDRNL---CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
G+VHR++KP N+LL L LADFGLA E G+ F
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-------------GEQQAWF---GF 173
Query: 239 VGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+L+K+ + + D+++ G+ + LL G P+ D
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 135/318 (42%), Gaps = 59/318 (18%)
Query: 63 LPPSSYTLLSPIARGAESVVYEA-------TLDGRKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA T R VAVK +L +T E EL
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVK--MLKEGATHSEHRALMSEL 83
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKD 143
Query: 160 --SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKE 217
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 144 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA-------- 195
Query: 218 ISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVV 276
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 196 ------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 277 PYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNP 336
PY ++ + + L+ G R + + + P +++ CW G P
Sbjct: 250 PYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHGEP 292
Query: 337 HNRPSFSDIALELDLVLE 354
RP+FS++ L +L+
Sbjct: 293 SQRPTFSELVEHLGNLLQ 310
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 81
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 195
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 196 --------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 248 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 290
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 291 EPSQRPTFSELVEHLGNLLQ 310
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 20/191 (10%)
Query: 89 GRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNL 148
GR+VAVK L + + E+ ++ H + + ++ EF + L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 149 AEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGL 208
+ V + + +Q+ + + +AL YLH G++HRD+K ++LL + L+DFG
Sbjct: 130 TDI--VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGF 187
Query: 209 -AEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGIS 267
A+ +++ + +K +VGT +MAPE++ + +++ + D++S GI
Sbjct: 188 CAQISKDVPK-----------------RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 268 INELLTGVVPY 278
+ E++ G PY
Sbjct: 231 VIEMVDGEPPY 241
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 70 LLSPIARGAESVVYEATLD---GRKVAV-----KKPILSTSEELDNFHKELQLLCKLDHP 121
LL + G+ VV D G+ V+V K +LS E +D+F +E+ + LDH
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + PP M E +L ++L + + + A Q+A+ + YL +
Sbjct: 72 NLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+HRD+ N+LL + DFGL +N ++ H+K
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE-----------HRKV--- 176
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE LK S SD + FG+++ E+ T G P+ L H + + ++
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGER 233
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
L RP P I +++ +CW P +RP+F +AL D +LE
Sbjct: 234 LP--------RPE------DCPQDIYNVMVQCWAHKPEDRPTF--VALR-DFLLE 271
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 90 RKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESR 146
+KVA+K + +L S+ +E+ L L HP + K P + + E Y
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE-YAGG 93
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADF 206
L + + VE+ + D+ Q+ A++Y H IVHRD+KP N+LLD NL +ADF
Sbjct: 94 ELFDYI-VEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADF 152
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHS-EKSDVYSFG 265
GL S T G K G+ Y APE++ ++++ + DV+S G
Sbjct: 153 GL-----------------SNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCG 195
Query: 266 ISINELLTGVVPYTD 280
I + +L G +P+ D
Sbjct: 196 IVLYVMLVGRLPFDD 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 72
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 186
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 187 --------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 238
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 239 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 281
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 282 EPSQRPTFSELVEHLGNLLQ 301
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 64/328 (19%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEAT---LDGR----KVAVKKPILSTS-EELDNFHKELQ 113
P + L + G V +AT L GR VAVK + S EL + E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 114 LLCKLDHPGLAKFVAAHAKPPNYMFFFEF----------YESRNLAEKL----------- 152
+L +++HP + K A ++ + E+ ESR +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 153 --HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
H +E + ++ ++ A Q+++ +QYL + +VHRD+ N+L+ ++DFGL+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS- 197
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
R+ +E S RS G+ + +MA E L I++ +SDV+SFG+ + E
Sbjct: 198 -RDVYEEDSXVK-RSQGRI-----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
++T G PY + E + +L+ + + RP S E+ L+
Sbjct: 245 IVTLGGNPYPGIPPE-RLFNLLKTGHRME-----------RPDNCSEEM------YRLML 286
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW P RP F+DI+ +L+ ++ R+
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 70 LLSPIARGAESVVYEATLD---GRKVAV-----KKPILSTSEELDNFHKELQLLCKLDHP 121
LL + G+ VV D G+ V+V K +LS E +D+F +E+ + LDH
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + PP M E +L ++L + + + A Q+A+ + YL +
Sbjct: 72 NLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+HRD+ N+LL + DFGL +N ++ H+K
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-----------HRKV--- 176
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE LK S SD + FG+++ E+ T G P+ L H + + ++
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGER 233
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
L RP P I +++ +CW P +RP+F +AL D +LE
Sbjct: 234 LP--------RPE------DCPQDIYNVMVQCWAHKPEDRPTF--VALR-DFLLE 271
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 59/319 (18%)
Query: 62 HLPPSSYTLLSPIARGA--ESVVYEAT-LDGRK----VAVKKPIL---STSEELDNFHKE 111
P TL P+ GA + V+ EA +D K V V +L +T ++L + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH---------------VE 155
++++ + H + + A + E+ NL E L V
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 156 EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
E + ++ QLA+ ++YL + +HRD+ NVL+ N +ADFGLA
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----- 205
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
+ N K T G + +MAPE L +++ +SDV+SFG+ + E+ T G
Sbjct: 206 ---DINNIDXXKKTTNGRL------PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY + E + E + + +P + EL + +++ CW
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMD------------KPANCTNELYM------MMRDCWHA 298
Query: 335 NPHNRPSFSDIALELDLVL 353
P RP+F + +LD +L
Sbjct: 299 VPSQRPTFKQLVEDLDRIL 317
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N ++ + S D+
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKNGCLLKYIRKIG-SFDETCTRFY 137
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 191
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
+ VGT Y++PE+L ++ S+ SD+++ G I +L+ G+ P+
Sbjct: 192 --------NSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 70 LLSPIARGAESVVYEATLD---GRKVAV-----KKPILSTSEELDNFHKELQLLCKLDHP 121
LL + G+ VV D G+ V+V K +LS E +D+F +E+ + LDH
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + PP M E +L ++L + + + A Q+A+ + YL +
Sbjct: 72 NLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
+HRD+ N+LL + DFGL +N ++ H+K
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE-----------HRKV--- 176
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQ 299
+ APE LK S SD + FG+++ E+ T G P+ L H + + ++
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGER 233
Query: 300 LTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
L RP P I +++ +CW P +RP+F +AL D +LE
Sbjct: 234 LP--------RPE------DCPQDIYNVMVQCWAHKPEDRPTF--VALR-DFLLE 271
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 64/328 (19%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEAT---LDGR----KVAVKKPILSTS-EELDNFHKELQ 113
P + L + G V +AT L GR VAVK + S EL + E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 114 LLCKLDHPGLAKFVAAHAKPPNYMFFFEF----------YESRNLAEKL----------- 152
+L +++HP + K A ++ + E+ ESR +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 153 --HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
H +E + ++ ++ A Q+++ +QYL + +VHRD+ N+L+ ++DFGL+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS- 197
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
R+ +E S RS G+ + +MA E L I++ +SDV+SFG+ + E
Sbjct: 198 -RDVYEEDSXVK-RSQGRI-----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
++T G PY + E + +L+ + + RP S E+ L+
Sbjct: 245 IVTLGGNPYPGIPPE-RLFNLLKTGHRME-----------RPDNCSEEM------YRLML 286
Query: 330 RCWDGNPHNRPSFSDIALELDLVLEHRK 357
+CW P RP F+DI+ +L+ ++ R+
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 81
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 195
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 196 --------RDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 248 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 290
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 291 EPSQRPTFSELVEHLGNLLQ 310
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 64/327 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEAT---LDGR----KVAVKKPILSTS-EELDNFHKELQL 114
P + L + G V +AT L GR VAVK + S EL + E +
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 115 LCKLDHPGLAKFVAAHAKPPNYMFFFEF----------YESRNLAEKL------------ 152
L +++HP + K A ++ + E+ ESR +
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 153 -HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEY 211
H +E + ++ ++ A Q+++ +QYL + +VHRD+ N+L+ ++DFGL+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS-- 197
Query: 212 RENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINEL 271
R+ +E S RS G+ + +MA E L I++ +SDV+SFG+ + E+
Sbjct: 198 RDVYEEDSYVK-RSQGRI-----------PVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 272 LT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQR 330
+T G PY + E + +L+ + + RP S E+ L+ +
Sbjct: 246 VTLGGNPYPGIPPE-RLFNLLKTGHRME-----------RPDNCSEEM------YRLMLQ 287
Query: 331 CWDGNPHNRPSFSDIALELDLVLEHRK 357
CW P RP F+DI+ +L+ ++ R+
Sbjct: 288 CWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + GF
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMAGF--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 125/295 (42%), Gaps = 58/295 (19%)
Query: 71 LSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLD-------HP 121
L I RGA V + G+ +AVK+ I ST +E ++ QLL LD P
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKR-IRSTVDE----KEQKQLLMDLDVVMRSSDCP 81
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL------MIAAQLAKAL 175
+ +F A + + E + +K + +S +D V+ I KAL
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYS-VLDDVIPEEILGKITLATVKAL 138
Query: 176 QYL-HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFH 234
+L NL I+HRD+KP+N+LLDR+ L DFG+ SG+
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI-----------------SGQLVDSIA 181
Query: 235 KKNMVGTLIYMAPEIL----KKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTV 290
K G YMAPE + ++ + +SDV+S GI++ EL TG PY
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP----------- 230
Query: 291 LEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ N QLT VV G + S E S ++ + C + RP + ++
Sbjct: 231 -KWNSVFDQLT-QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 75
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + GF
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMAGF--- 178
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 179 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 52/303 (17%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKKPILSTS--EELDNFHKELQ 113
P ++ + GA V EAT G KVAVK + ST+ +E + EL+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM-LKSTAHADEKEALMSELK 101
Query: 114 LLCKL-DHPGLAKFVAA--HAKP----PNYMFFFEF--YESRNLAEKLHVEEWSP-SVDQ 163
++ L H + + A H P Y + + + R L E+ P +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 164 VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNW 223
+L ++Q+A+ + +L + +HRDV NVLL + DFGLA
Sbjct: 162 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA-------------- 207
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLR 282
R + K N + +MAPE + +++ +SDV+S+GI + E+ + G+ PY +
Sbjct: 208 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 267
Query: 283 AEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
++ + +++ Y Q P A P +I S++Q CW P +RP+F
Sbjct: 268 VNSKFYKLVKDGYQMAQ-----------PAFA------PKNIYSIMQACWALEPTHRPTF 310
Query: 343 SDI 345
I
Sbjct: 311 QQI 313
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 26 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 83
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 84 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLY 143
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 197
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 198 --------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 249
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 250 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 292
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 293 EPSQRPTFSELVEHLGNLLQ 312
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 52/303 (17%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGR-------KVAVKKPILSTS--EELDNFHKELQ 113
P ++ + GA V EAT G KVAVK + ST+ +E + EL+
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM-LKSTAHADEKEALMSELK 93
Query: 114 LLCKL-DHPGLAKFVAA--HAKP----PNYMFFFEF--YESRNLAEKLHVEEWSP-SVDQ 163
++ L H + + A H P Y + + + R L E+ P +
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 164 VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNW 223
+L ++Q+A+ + +L + +HRDV NVLL + DFGLA
Sbjct: 154 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA-------------- 199
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLR 282
R + K N + +MAPE + +++ +SDV+S+GI + E+ + G+ PY +
Sbjct: 200 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 259
Query: 283 AEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
++ + +++ Y Q P A P +I S++Q CW P +RP+F
Sbjct: 260 VNSKFYKLVKDGYQMAQ-----------PAFA------PKNIYSIMQACWALEPTHRPTF 302
Query: 343 SDI 345
I
Sbjct: 303 QQI 305
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + GF
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMAGF--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 72
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 186
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 187 --------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 238
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 239 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 281
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 282 EPSQRPTFSELVEHLGNLLQ 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 81
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 82 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 141
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 195
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 196 --------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 248 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 290
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 291 EPSQRPTFSELVEHLGNLLQ 310
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 39/204 (19%)
Query: 149 AEKLHVEEWSPSVDQVL-MIAAQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADF 206
AEKL P +++L + + KAL YL G++HRDVKP+N+LLD L DF
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDF 169
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK-----KEIHSEKSDV 261
G+ SG+ K G YMAPE + K + ++DV
Sbjct: 170 GI-----------------SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADV 212
Query: 262 YSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLP 321
+S GIS+ EL TG PY + + + + VL E+ P L +G
Sbjct: 213 WSLGISLVELATGQFPYKNCKTDFE---VLTKVLQEE------------PPLLPGHMGFS 257
Query: 322 ASILSLIQRCWDGNPHNRPSFSDI 345
S ++ C + RP ++ +
Sbjct: 258 GDFQSFVKDCLTKDHRKRPKYNKL 281
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQL---LCKL-DHP 121
Y L I +GA SVV G + A K I++T + H++L+ +C+L H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAK--IINTKKLSARDHQKLEREARICRLLKHS 63
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ + + ++ + F+ L E + E+ D I Q+ +A+ + H +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAVLHCHQM 122
Query: 182 GIVHRDVKPANVLLD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
G+VHRD+KP N+LL + LADFGLA I ++ G F
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLA--------IEVQ-----GDQQAWF---GF 166
Query: 239 VGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+L+KE + + D+++ G+ + LL G P+ D
Sbjct: 167 AGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWD 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 138
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 192
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
+ VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 193 --------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 118
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 232
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 233 --------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 284
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 285 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 327
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 328 EPSQRPTFSELVEHLGNLLQ 347
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
Query: 93 AVKKPILSTSEELDNFHKELQLLC-KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEK 151
+KK ++ ++++ E ++L +HP L + P F EF +L
Sbjct: 55 VLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLM-- 112
Query: 152 LHVEEWSPSVDQVL--MIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLA 209
H+++ S D+ AA++ AL +LH+ GI++RD+K NVLLD LADFG+
Sbjct: 113 FHIQK-SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC 171
Query: 210 EYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISIN 269
K +G T F GT Y+APEIL++ ++ D ++ G+ +
Sbjct: 172 -----------KEGICNGVTTATF-----CGTPDYIAPEILQEMLYGPAVDWWAMGVLLY 215
Query: 270 ELLTGVVPY 278
E+L G P+
Sbjct: 216 EMLCGHAPF 224
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 61/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG-------RKVAVKKPIL---STSEELDNFHKEL 112
P L P+ RGA V EA G R VAVK +L +T E EL
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVK--MLKEGATHSEHRALMSEL 72
Query: 113 QLLCKLDHP-GLAKFVAAHAKPPN-YMFFFEFYESRNLAEKLHVE--EWSP--------- 159
++L + H + + A KP M EF + NL+ L + E+ P
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 160 ----SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA------ 186
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G
Sbjct: 187 --------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 238
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY ++ + + L+ G R + + + P +++ CW G
Sbjct: 239 ASPYPGVKIDEEFCRRLK--------------EGTR--MRAPDYTTPEMYQTMLD-CWHG 281
Query: 335 NPHNRPSFSDIALELDLVLE 354
P RP+FS++ L +L+
Sbjct: 282 EPSQRPTFSELVEHLGNLLQ 301
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 27/241 (11%)
Query: 61 LHLPPSSYTLLSPIARG--AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLL 115
LH+ +Y LL I +G A+ + L G++VAVK K L++S L +E++++
Sbjct: 4 LHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSS-LQKLFREVRIM 60
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKAL 175
L+HP + K E+ + + L W + Q+ A+
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKE-KEARAKFRQIVSAV 119
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
QY H IVHRD+K N+LLD ++ +ADFG S + T G
Sbjct: 120 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGF-----------------SNEFTFGNKL 162
Query: 236 KNMVGTLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMN 294
G+ Y APE+ + K+ + DV+S G+ + L++G +P+ + VL
Sbjct: 163 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 222
Query: 295 Y 295
Y
Sbjct: 223 Y 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA V A G KVAVK +T ++L + E+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE-------WSPSVD-- 162
+++ + H + + A + E+ NL E L E ++PS +
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 163 ------QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 201
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 202 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 249 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 290
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 291 AVPSQRPTFKQLVEDLDRIV 310
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 32/189 (16%)
Query: 158 SPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKE 217
+ S +L ++Q+A+ + +L + +HRDV NVLL + DFGLA
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA-------- 211
Query: 218 ISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVV 276
R + K N + +MAPE + +++ +SDV+S+GI + E+ + G+
Sbjct: 212 ------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 277 PYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNP 336
PY + ++ + +++ Y Q P A P +I S++Q CW P
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQ-----------PAFA------PKNIYSIMQACWALEP 308
Query: 337 HNRPSFSDI 345
+RP+F I
Sbjct: 309 THRPTFQQI 317
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 140
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 141 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 194
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 195 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 32/187 (17%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
S +L ++Q+A+ + +L + +HRDV NVLL + DFGLA
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---------- 211
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R + K N + +MAPE + +++ +SDV+S+GI + E+ + G+ PY
Sbjct: 212 ----RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
+ ++ + +++ Y Q P A P +I S++Q CW P +
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQ-----------PAFA------PKNIYSIMQACWALEPTH 310
Query: 339 RPSFSDI 345
RP+F I
Sbjct: 311 RPTFQQI 317
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 137
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 191
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 192 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 137
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 191
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 192 --------NXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+ + +L A Q+AK +++L VHRD+ NVL+ + DFGLA +S
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR-----DIMS 224
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
N+ G N + +MAPE L + I++ KSDV+S+GI + E+ + GV PY
Sbjct: 225 DSNYVVRG---------NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
+ +A + +++ + Q P A+ E I ++Q CW +
Sbjct: 276 PGIPVDANFYKLIQNGFKMDQ-----------PFYATEE------IYIIMQSCWAFDSRK 318
Query: 339 RPSFSDIA 346
RPSF ++
Sbjct: 319 RPSFPNLT 326
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K F + ++N E L S D+
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY--AKN-GELLKYIRKIGSFDETCTRFY 134
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 188
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
+ VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 189 --------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 135
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 189
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 190 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 41/283 (14%)
Query: 74 IARGAESVVYEATLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAAHA 131
I +G VY G +VA++ + E L F +E+ + H + F+ A
Sbjct: 41 IGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
PP+ + R L + + V++ IA ++ K + YLH GI+H+D+K
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSK 159
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
NV D N + DFGL S+ +G+ +N G L ++APEI++
Sbjct: 160 NVFYD-NGKVVITDFGL---------FSISGVLQAGRREDKLRIQN--GWLCHLAPEIIR 207
Query: 252 ---------KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTA 302
K S+ SDV++ G EL P+ AEA + +M
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA---IIWQMGT------- 257
Query: 303 AVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
G++P L+ ++G+ I ++ CW RP+F+ +
Sbjct: 258 -----GMKPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKL 293
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 138
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 192
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 193 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 137
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 191
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 192 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 29/182 (15%)
Query: 104 ELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNL----AEKLHVEEWSP 159
E+ N KELQ++ L+HP L + + + +L + +H +E
Sbjct: 58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE--- 114
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+ V + +L AL YL N I+HRD+KP N+LLD + H+ DF +A +I+
Sbjct: 115 --ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIHSEKSDVYSFGISINELLTGVV 276
M GT YMAPE+ K +S D +S G++ ELL G
Sbjct: 173 -----------------TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
Query: 277 PY 278
PY
Sbjct: 216 PY 217
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 137
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 191
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 192 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 135
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 189
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 190 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 135
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 189
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 190 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 112/278 (40%), Gaps = 47/278 (16%)
Query: 88 DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRN 147
D VAVK ++ +F +E +LL L H + +F + + FE+ +
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 148 LAEKLHV-----------EEWSPS---VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANV 193
L L E+ +P + Q+L +A+Q+A + YL L VHRD+ N
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC 189
Query: 194 LLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE 253
L+ + L + DFG++ ++I ++ G T + + +M PE +
Sbjct: 190 LVGQGLVVKIGDFGMS------RDIYSTDYYRVGGRT--------MLPIRWMPPESILYR 235
Query: 254 IHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPI 312
+ +SDV+SFG+ + E+ T G P+ L + + E RP
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE------------RP- 282
Query: 313 LASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELD 350
P + ++++ CW P R S D+ L
Sbjct: 283 -----RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 88 DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRN 147
D VAVK ++ +F +E +LL L H + +F + + FE+ +
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 148 LAEKLHV-----------EEWSPS---VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANV 193
L L E+ +P + Q+L +A+Q+A + YL L VHRD+ N
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC 160
Query: 194 LLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE 253
L+ + L + DFG++ ++I ++ G T + + +M PE +
Sbjct: 161 LVGQGLVVKIGDFGMS------RDIYSTDYYRVGGRT--------MLPIRWMPPESILYR 206
Query: 254 IHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPI 312
+ +SDV+SFG+ + E+ T G P+ L + + E RP
Sbjct: 207 KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE------------RP- 253
Query: 313 LASLELGLPASILSLIQRCWDGNPHNRPSFSDIALEL 349
P + ++++ CW P R S D+ L
Sbjct: 254 -----RACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 86 RERDVMSRLDHPFFVKLYFCFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 142
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 196
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 197 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 56/292 (19%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHPG 122
Y L PI GA+ +V A T+ G VAVKK P + + ++EL LL ++H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA-KRAYRELVLLKCVNHKN 82
Query: 123 LAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQY 177
+ + F + Y NL + +H+E + +L Q+ +++
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY---QMLCGIKH 139
Query: 178 LHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKN 237
LH+ GI+HRD+KP+N+++ + + DFGLA + F
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------TASTNFMMTP 182
Query: 238 MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
V T Y APE++ + E D++S G + EL+ G V + Q + V+E
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE----- 237
Query: 298 QQLTAAVVSGGLRPILASLELGLP-ASILSLIQRCWDGNPHNRPSFSDIALE 348
+LG P A ++ +Q NRP++ IA E
Sbjct: 238 -------------------QLGTPSAEFMAALQPTVRNYVENRPAYPGIAFE 270
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 88 DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRN 147
D VAVK ++ +F +E +LL L H + +F + + FE+ +
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 148 LAEKLHV-----------EEWSPS---VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANV 193
L L E+ +P + Q+L +A+Q+A + YL L VHRD+ N
Sbjct: 107 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC 166
Query: 194 LLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE 253
L+ + L + DFG++ ++I ++ G T + + +M PE +
Sbjct: 167 LVGQGLVVKIGDFGMS------RDIYSTDYYRVGGRT--------MLPIRWMPPESILYR 212
Query: 254 IHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPI 312
+ +SDV+SFG+ + E+ T G P+ L + + E RP
Sbjct: 213 KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE------------RP- 259
Query: 313 LASLELGLPASILSLIQRCWDGNPHNRPSFSDIALEL 349
P + ++++ CW P R S D+ L
Sbjct: 260 -----RACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 137
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 191
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 192 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 135
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 189
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 190 NA--------FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 115
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 116 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 169
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 170 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 32/194 (16%)
Query: 153 HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYR 212
H E S +L ++Q+A+ + +L + +HRDV NVLL + DFGLA
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA--- 213
Query: 213 ENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
R + K N + +MAPE + +++ +SDV+S+GI + E+
Sbjct: 214 -----------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
Query: 273 T-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRC 331
+ G+ PY + ++ + +++ Y Q P A P +I S++Q C
Sbjct: 263 SLGLNPYPGILVNSKFYKLVKDGYQMAQ-----------PAFA------PKNIYSIMQAC 305
Query: 332 WDGNPHNRPSFSDI 345
W P +RP+F I
Sbjct: 306 WALEPTHRPTFQQI 319
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA V A G KVAVK +T ++L + E+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVEE 156
+++ + H + + A + E+ NL E L H E
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 157 WSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 201
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 202 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 249 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 290
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 291 AVPSQRPTFKQLVEDLDRIV 310
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 150 EKLHVEEWSP-SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGL 208
E L E+ P + +L ++Q+A+ + +L + +HRDV NVLL + DFGL
Sbjct: 145 EGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 209 AEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISI 268
A R + K N + +MAPE + +++ +SDV+S+GI +
Sbjct: 205 A--------------RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 250
Query: 269 NELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSL 327
E+ + G+ PY + ++ + +++ Y Q P A P +I S+
Sbjct: 251 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ-----------PAFA------PKNIYSI 293
Query: 328 IQRCWDGNPHNRPSFSDI 345
+Q CW P +RP+F I
Sbjct: 294 MQACWALEPTHRPTFQQI 311
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 121/292 (41%), Gaps = 46/292 (15%)
Query: 70 LLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAA 129
LL I +G V G KVAVK + F E ++ +L H L + +
Sbjct: 25 LLQTIGKGEFGDVMLGDYRGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 130 HAKPPNYMFFF-EFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ ++ E+ +L + L S D +L + + +A++YL VHRD
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+ NVL+ + ++DFGL KE SS + TG K + AP
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLT------KEA------SSTQDTGKLPVK-------WTAP 183
Query: 248 EILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVS 306
E L+++ S KSDV+SFGI + E+ + G VPY + + V E Y
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPD----- 237
Query: 307 GGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKS 358
G P ++ +++ CW + RPSF L+L LEH K+
Sbjct: 238 ------------GCPPAVYEVMKNCWHLDAAMRPSF----LQLREQLEHIKT 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 140 FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
E R+L E LH + + + Q+ QYLH ++HRD+K N+ L+ +L
Sbjct: 100 LELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL 158
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS 259
+ DFGLA E G KK + GT Y+APE+L K+ HS +
Sbjct: 159 EVKIGDFGLATKVE----------------YDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 260 DVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG 319
DV+S G + LL G P+ + L+ Y + + + P+ A
Sbjct: 203 DVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSIPKHINPVAA----- 249
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDI 345
SLIQ+ +P RP+ +++
Sbjct: 250 ------SLIQKMLQTDPTARPTINEL 269
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA V A G KVAVK +T ++L + E+
Sbjct: 17 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 76
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVEE 156
+++ + H + + A + E+ NL E L H E
Sbjct: 77 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 157 WSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 193
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 194 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 240
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 241 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 282
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 283 AVPSQRPTFKQLVEDLDRIV 302
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 112
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 113 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 166
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 167 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 114
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 115 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 168
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 169 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 140 FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
E R+L E LH + + + Q+ QYLH ++HRD+K N+ L+ +L
Sbjct: 96 LELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL 154
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS 259
+ DFGLA E G KK + GT Y+APE+L K+ HS +
Sbjct: 155 EVKIGDFGLATKVE----------------YDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 260 DVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG 319
DV+S G + LL G P+ + L+ Y + + + P+ A
Sbjct: 199 DVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSIPKHINPVAA----- 245
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDI 345
SLIQ+ +P RP+ +++
Sbjct: 246 ------SLIQKMLQTDPTARPTINEL 265
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K + +F ++N E L S D+
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKN-GELLKYIRKIGSFDETCTRFY 113
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 167
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 168 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 33/189 (17%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIYET 183
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+ +R GK + + +MAPE LK + + SD++SFG+ + E+ + P
Sbjct: 184 AY--YRKGGKG---------LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y L E V++ Y +Q P + L++ CW NP
Sbjct: 233 YQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFNPK 274
Query: 338 NRPSFSDIA 346
RP+F +I
Sbjct: 275 MRPTFLEIV 283
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K F + ++N E L S D+
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY--AKN-GELLKYIRKIGSFDETCTRFY 119
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 120 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 173
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 174 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA V A G KVAVK +T ++L + E+
Sbjct: 14 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 73
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVEE 156
+++ + H + + A + E+ NL E L H E
Sbjct: 74 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 157 WSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 190
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 191 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 237
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 238 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 279
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 280 AVPSQRPTFKQLVEDLDRIV 299
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA V A G KVAVK +T ++L + E+
Sbjct: 10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVEE 156
+++ + H + + A + E+ NL E L H E
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 157 WSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 186
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 187 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 234 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 275
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 276 AVPSQRPTFKQLVEDLDRIV 295
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGA--ESVVYEAT-LDG------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA + V+ EA LD KVAVK +T ++L + E+
Sbjct: 18 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 77
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVEE 156
+++ + H + + A + E+ NL E L H E
Sbjct: 78 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 157 WSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 194
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 195 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 241
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 242 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 283
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 284 AVPSQRPTFKQLVEDLDRIV 303
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA V A G KVAVK +T ++L + E+
Sbjct: 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVEE 156
+++ + H + + A + E+ NL E L H E
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 157 WSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 242
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 243 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 290 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 331
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 332 AVPSQRPTFKQLVEDLDRIV 351
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 140 FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
E R+L E LH + + + Q+ QYLH ++HRD+K N+ L+ +L
Sbjct: 96 LELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL 154
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS 259
+ DFGLA E G KK + GT Y+APE+L K+ HS +
Sbjct: 155 EVKIGDFGLATKVE----------------YDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 260 DVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG 319
DV+S G + LL G P+ + L+ Y + + + P+ A
Sbjct: 199 DVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSIPKHINPVAA----- 245
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDI 345
SLIQ+ +P RP+ +++
Sbjct: 246 ------SLIQKMLQTDPTARPTINEL 265
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL--MI 167
+E ++ +LDHP K F + ++N E L S D+
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY--AKN-GELLKYIRKIGSFDETCTRFY 134
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
A++ AL+YLH GI+HRD+KP N+LL+ ++ + DFG A K +S ++ ++
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA------KVLSPESKQARA 188
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PE+L ++ + SD+++ G I +L+ G+ P+
Sbjct: 189 --------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 120/292 (41%), Gaps = 46/292 (15%)
Query: 70 LLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAA 129
LL I +G V G KVAVK + F E ++ +L H L + +
Sbjct: 16 LLQTIGKGEFGDVMLGDYRGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 130 HAKPPNYMFFF-EFYESRNLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ ++ E+ +L + L S D +L + + +A++YL VHRD
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 133
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+ NVL+ + ++DFGL KE SS + TG K + AP
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLT------KEA------SSTQDTGKLPVK-------WTAP 174
Query: 248 EILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVS 306
E L++ S KSDV+SFGI + E+ + G VPY + + V E Y
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPD----- 228
Query: 307 GGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKS 358
G P ++ +++ CW + RPSF L+L LEH K+
Sbjct: 229 ------------GCPPAVYEVMKNCWHLDAAMRPSF----LQLREQLEHIKT 264
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 87 LDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFY 143
L G KVAVK + + + + + +E+Q L HP + K + P + E+
Sbjct: 39 LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98
Query: 144 ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL 203
L + + + + + Q+ + Y H +VHRD+KP NVLLD ++ +
Sbjct: 99 SGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKI 157
Query: 204 ADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHS-EKSDVY 262
ADFGL+ N S G+ + G+ Y APE++ +++ + D++
Sbjct: 158 ADFGLS------------NMMSDGE-----FLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 263 SFGISINELLTGVVPYTDLRAEAQAHTVLE-MNYTEQQLTAAVVS 306
S G+ + LL G +P+ D + + + YT Q L +V+S
Sbjct: 201 SSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVIS 245
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 98
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 201
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 202 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 246
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 85
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 188
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 189 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSPI GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 26 PERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 84
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLA--------------RHTDDEMTGY--- 187
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 188 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 65 PSSYTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKL 118
P L P+ GA V Y+A L +KVAVKK P S + +EL+LL L
Sbjct: 27 PQRLQGLRPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTY-RELRLLKHL 84
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKAL 175
H + + + F E Y L L+ V+ + S + V + QL + L
Sbjct: 85 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGL 144
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
+Y+H+ GI+HRD+KP+NV ++ + + DFGLA R + + G+
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA--------------RQADEEMTGY-- 188
Query: 236 KNMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG 274
V T Y APEI+ +H ++ D++S G + ELL G
Sbjct: 189 ---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 99
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 202
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 203 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 122/292 (41%), Gaps = 46/292 (15%)
Query: 70 LLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAA 129
LL I +G V G KVAVK + F E ++ +L H L + +
Sbjct: 10 LLQTIGKGEFGDVMLGDYRGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 130 HAKPPNYMFFFEFYESR-NLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ ++ Y ++ +L + L S D +L + + +A++YL VHRD
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 127
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+ NVL+ + ++DFGL KE SS + TG K + AP
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLT------KEA------SSTQDTGKLPVK-------WTAP 168
Query: 248 EILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVS 306
E L+++ S KSDV+SFGI + E+ + G VPY + + V E Y
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPD----- 222
Query: 307 GGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEHRKS 358
G P ++ +++ CW + RPSF L+L LEH K+
Sbjct: 223 ------------GCPPAVYEVMKNCWHLDAAMRPSF----LQLREQLEHIKT 258
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 45/267 (16%)
Query: 92 VAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEK 151
VAVK ++ +FH+E +LL L H + KF + + FE+ + +L +
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 152 LH--------VEEWSPSVD----QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
L + E +P + Q+L IA Q+A + YL + VHRD+ N L+ NL
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS 259
+ DFG++ +++ ++ G T + + +M PE + + +S
Sbjct: 166 LVKIGDFGMS------RDVYSTDYYRVGGHT--------MLPIRWMPPESIMYRKFTTES 211
Query: 260 DVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLEL 318
DV+S G+ + E+ T G P+ L + + ++ T
Sbjct: 212 DVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC---------------- 255
Query: 319 GLPASILSLIQRCWDGNPHNRPSFSDI 345
P + L+ CW PH R + I
Sbjct: 256 --PQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 75
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 178
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 179 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 86
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTADEMTGY--- 189
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 190 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 86
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTADEMTGY--- 189
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 190 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 33/188 (17%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIYET 182
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+R GK + + +MAPE LK + + SD++SFG+ + E+ + P
Sbjct: 183 DY--YRKGGKG---------LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 231
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y L E V++ Y +Q P + L++ CW NP
Sbjct: 232 YQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFNPK 273
Query: 338 NRPSFSDI 345
RP+F +I
Sbjct: 274 MRPTFLEI 281
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 75
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL--AEKLHVEEWSP-SVDQVLMIAAQLAKALQ 176
H + + + F + Y +L A+ ++ + + + D V + Q+ + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLK 135
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 178
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 179 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 86
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTADEMTGY--- 189
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 190 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIYET 183
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+R GK + + +MAPE LK + + SD++SFG+ + E+ + P
Sbjct: 184 DY--YRKGGKG---------LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y L E V++ Y +Q P + L++ CW NP
Sbjct: 233 YQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFNPK 274
Query: 338 NRPSFSDIA 346
RP+F +I
Sbjct: 275 MRPTFLEIV 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 185
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 186 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 233 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 272
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 273 YNPKMRPSFLEI 284
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF S +L + + + P + L QL + L + H+ ++H
Sbjct: 74 IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 129
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 173
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 32/275 (11%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEAT------LDGRKVAVKKPILSTSEELDNFHKELQLL 115
H + + P+ +G VY A + KV K I E +E+++
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE-HQLRREIEIQ 77
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKAL 175
L HP + + E+ L ++L + + + I +LA AL
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTATIMEELADAL 136
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y H ++HRD+KP N+LL +ADFG + + +L+ +
Sbjct: 137 MYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR------------------R 178
Query: 236 KNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
K M GTL Y+ PE+++ +H+EK D++ G+ ELL G P+ E+ +H
Sbjct: 179 KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF-----ESASHNETYRRI 233
Query: 296 TEQQLT-AAVVSGGLRPILASLELGLPASILSLIQ 329
+ L A V G + +++ L P+ L L Q
Sbjct: 234 VKVDLKFPASVPTGAQDLISKLLRHNPSERLPLAQ 268
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 63/320 (19%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKEL 112
LP L P+ GA V A G KVAVK +T ++L + E+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 113 QLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVEE 156
+++ + H + + A + E+ NL E L H E
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 157 WSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLK 216
S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIH 201
Query: 217 EISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHSEKSDVYSFGISINELLT- 273
I ++KK G L +MAPE L I++ +SDV+SFG+ + E+ T
Sbjct: 202 HID-------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248
Query: 274 GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWD 333
G PY + E + E + + +P + EL + +++ CW
Sbjct: 249 GGSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWH 290
Query: 334 GNPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 291 AVPSQRPTFKQLVEDLDRIV 310
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF S +L + + + P + L QL + L + H+ ++H
Sbjct: 73 IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 128
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 172
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIXET 176
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
R GK + + +M+PE LK + + SDV+SFG+ + E+ T P
Sbjct: 177 DXX--RKGGKG---------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 225
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWDGN 335
Y L + +Q+ V+ GGL +P P +L L++ CW N
Sbjct: 226 YQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLLELMRMCWQYN 265
Query: 336 PHNRPSFSDI 345
P RPSF +I
Sbjct: 266 PKMRPSFLEI 275
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 181
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 182 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 228
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 229 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 268
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 269 YNPKMRPSFLEI 280
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 182
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 183 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 229
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 230 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 269
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 270 YNPKMRPSFLEI 281
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 178
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 179 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 226 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 265
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 266 YNPKMRPSFLEI 277
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 44/285 (15%)
Query: 67 SYTLLSPIARGAESVVYEA--TLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y ++ + G+ V A T G+KVA+K K +L+ S+ +E+ L L HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + E Y L + + V+ S + Q+ A++Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIE-YAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+KP N+LLD +L +ADFGL S T G K G+
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGL-----------------SNIMTDGNFLKTSCGS 175
Query: 242 LIYMAPEILKKEIHS-EKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQL 300
Y APE++ ++++ + DV+S G+ + +L +P+ D ++ VL N
Sbjct: 176 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKN------ 224
Query: 301 TAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+S G+ + L G LI+R NP NR S +I
Sbjct: 225 ----ISNGVYTLPKFLSPGAAG----LIKRMLIVNPLNRISIHEI 261
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 44/285 (15%)
Query: 67 SYTLLSPIARGAESVVYEA--TLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y ++ + G+ V A T G+KVA+K K +L+ S+ +E+ L L HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + E Y L + + V+ S + Q+ A++Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIE-YAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+KP N+LLD +L +ADFGL S T G K G+
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGL-----------------SNIMTDGNFLKTSCGS 174
Query: 242 LIYMAPEILKKEIHS-EKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQL 300
Y APE++ ++++ + DV+S G+ + +L +P+ D ++ VL N
Sbjct: 175 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKN------ 223
Query: 301 TAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+S G+ + L G LI+R NP NR S +I
Sbjct: 224 ----ISNGVYTLPKFLSPGAAG----LIKRMLIVNPLNRISIHEI 260
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 99
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA + ++
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-------------------EMX 200
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 81
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 184
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 185 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 184
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 185 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 232 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 271
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 272 YNPKMRPSFLEI 283
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 70 LLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAA 129
LL I +G V G KVAVK + F E ++ +L H L + +
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 130 HAKPPNYMFFFEFYESR-NLAEKLHVEEWSP-SVDQVLMIAAQLAKALQYLHNLGIVHRD 187
+ ++ Y ++ +L + L S D +L + + +A++YL VHRD
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314
Query: 188 VKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAP 247
+ NVL+ + ++DFGL KE SS + TG K + AP
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLT------KEA------SSTQDTGKLPVK-------WTAP 355
Query: 248 EILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVS 306
E L+++ S KSDV+SFGI + E+ + G VPY + + V E Y
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPD----- 409
Query: 307 GGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEH 355
G P ++ +++ CW + RP+F + +L+ + H
Sbjct: 410 ------------GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 90
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLA--------------RHTDDEMTGY--- 193
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 194 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 238
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N + + + DFG+ ++ E
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMT---RDIYET 178
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 179 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P +L L++ CW
Sbjct: 226 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLLELMRMCWQ 265
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 266 YNPKMRPSFLEI 277
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 213
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+R GK + + +M+PE LK + + SDV+SFG+ + E+ T P
Sbjct: 214 DY--YRKGGKG---------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 262
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWDGN 335
Y L + +Q+ V+ GGL +P P + L++ CW N
Sbjct: 263 YQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQYN 302
Query: 336 PHNRPSFSDI 345
P RPSF +I
Sbjct: 303 PKMRPSFLEI 312
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 184
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 185 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 232 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 271
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 272 YNPKMRPSFLEI 283
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 91
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 194
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 195 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 32 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 90
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 193
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 194 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 91
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 194
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 195 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 19 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 77
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 137
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 138 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 180
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 181 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKV--AVKKPILSTSEELDNFHKELQLLCKLDHPGLAK 125
YTL + I RG+ V A G ++ A KK E++D F +E++++ LDHP + +
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 126 FVAAHAKPPNYMFFFEFYESRNLAEKL-HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ E L E++ H + S I + A+ Y H L +
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES--DAARIMKDVLSAVAYCHKLNVA 145
Query: 185 HRDVKPANVLL--DRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
HRD+KP N L D P L DFGLA + KP G + VGT
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLA---------------ARFKP--GKMMRTKVGT 188
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
Y++P++L+ ++ + D +S G+ + LL G P++
Sbjct: 189 PYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFS 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIXET 183
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
R GK + + +MAPE LK + + SD++SFG+ + E+ + P
Sbjct: 184 DXX--RKGGKG---------LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y L E V++ Y +Q P + L++ CW NP+
Sbjct: 233 YQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFNPN 274
Query: 338 NRPSFSDIA 346
RP+F +I
Sbjct: 275 MRPTFLEIV 283
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 81
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 184
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 185 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 191
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 192 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 239 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 278
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 279 YNPKMRPSFLEI 290
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 44/285 (15%)
Query: 67 SYTLLSPIARGAESVVYEA--TLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y ++ + G+ V A T G+KVA+K K +L+ S+ +E+ L L HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + E Y L + + V+ S + Q+ A++Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIE-YAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+KP N+LLD +L +ADFGL S T G K G+
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGL-----------------SNIMTDGNFLKTSCGS 169
Query: 242 LIYMAPEILKKEIHS-EKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQL 300
Y APE++ ++++ + DV+S G+ + +L +P+ D ++ VL N
Sbjct: 170 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKN------ 218
Query: 301 TAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+S G+ + L G LI+R NP NR S +I
Sbjct: 219 ----ISNGVYTLPKFLSPGAAG----LIKRMLIVNPLNRISIHEI 255
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 41/192 (21%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYET 191
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +M+PE LK + + SDV+SFG+ + E+ T
Sbjct: 192 D-------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWD 333
PY L + +Q+ V+ GGL +P P + L++ CW
Sbjct: 239 QPYQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQ 278
Query: 334 GNPHNRPSFSDI 345
NP RPSF +I
Sbjct: 279 YNPKMRPSFLEI 290
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 86
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 189
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 190 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 85
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 188
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 189 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 33 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMK 91
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 194
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 195 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 102
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 205
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 206 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 250
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 40 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 98
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 201
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 202 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 246
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 84
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLA--------------RHTDDEMTGY--- 187
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 188 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 44 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 102
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMXGY--- 205
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 206 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 250
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 76
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 179
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 180 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 85
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 188
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 189 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 41 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 99
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 202
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 203 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 140 FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
E R+L E LH + + + Q+ QYLH ++HRD+K N+ L+ +L
Sbjct: 120 LELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL 178
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS 259
+ DFGLA E G KK + GT Y+APE+L K+ HS +
Sbjct: 179 EVKIGDFGLATKVE----------------YDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 260 DVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG 319
DV+S G + LL G P+ + L+ Y + + + P+ A
Sbjct: 223 DVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSIPKHINPVAA----- 269
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDI 345
SLIQ+ +P RP+ +++
Sbjct: 270 ------SLIQKMLQTDPTARPTINEL 289
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 25/124 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL N +ADFG W S
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG---------------W-SVHA 162
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G+ P+ +AH
Sbjct: 163 PSS--RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-------EAH 213
Query: 289 TVLE 292
T E
Sbjct: 214 TYQE 217
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 140 FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
E R+L E LH + + + Q+ QYLH ++HRD+K N+ L+ +L
Sbjct: 94 LELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL 152
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS 259
+ DFGLA E G KK + GT Y+APE+L K+ HS +
Sbjct: 153 EVKIGDFGLATKVE----------------YDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 260 DVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG 319
DV+S G + LL G P+ + L+ Y + + + P+ A
Sbjct: 197 DVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSIPKHINPVAA----- 243
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDI 345
SLIQ+ +P RP+ +++
Sbjct: 244 ------SLIQKMLQTDPTARPTINEL 263
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 84
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 187
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 188 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 18 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 76
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 179
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 180 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 20 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 78
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 138
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 139 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 181
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 182 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 226
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 25/124 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL N +ADFG W S
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG---------------W-SVHA 162
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G+ P+ +AH
Sbjct: 163 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-------EAH 213
Query: 289 TVLE 292
T E
Sbjct: 214 TYQE 217
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 140 FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNL 199
E R+L E LH + + + Q+ QYLH ++HRD+K N+ L+ +L
Sbjct: 118 LELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL 176
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS 259
+ DFGLA E G KK + GT Y+APE+L K+ HS +
Sbjct: 177 EVKIGDFGLATKVE----------------YDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 260 DVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG 319
DV+S G + LL G P+ + L+ Y + + + P+ A
Sbjct: 221 DVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEYSIPKHINPVAA----- 267
Query: 320 LPASILSLIQRCWDGNPHNRPSFSDI 345
SLIQ+ +P RP+ +++
Sbjct: 268 ------SLIQKMLQTDPTARPTINEL 287
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF S +L + + + P + L QL + L + H+ ++H
Sbjct: 72 IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 127
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 171
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 26 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 84
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 187
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 188 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 123/285 (43%), Gaps = 44/285 (15%)
Query: 67 SYTLLSPIARGAESVVYEA--TLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y ++ + G+ V A T G+KVA+K K +L+ S+ +E+ L L HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K + E Y L + + V+ S + Q+ A++Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIE-YAGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+KP N+LLD +L +ADFGL S T G K G+
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGL-----------------SNIMTDGNFLKTSCGS 165
Query: 242 LIYMAPEILKKEIHS-EKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQL 300
Y APE++ ++++ + DV+S G+ + +L +P+ D ++ VL N
Sbjct: 166 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----ESIPVLFKN------ 214
Query: 301 TAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+S G+ + L G LI+R NP NR S +I
Sbjct: 215 ----ISNGVYTLPKFLSPGAAG----LIKRMLIVNPLNRISIHEI 251
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 81
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 184
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 185 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 75
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 178
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 179 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 65 PSSYTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKL 118
P L P+ GA V Y+A L +KVAVKK P S + +EL+LL L
Sbjct: 19 PQRLQGLRPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTY-RELRLLKHL 76
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKAL 175
H + + + F E Y L L+ V+ + S + V + QL + L
Sbjct: 77 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGL 136
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
+Y+H+ GI+HRD+KP+NV ++ + + DFGLA R + + G+
Sbjct: 137 KYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA--------------RQADEEMTGY-- 180
Query: 236 KNMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG 274
V T Y APEI+ +H ++ D++S G + ELL G
Sbjct: 181 ---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKV--AVKKPILSTSEELDNFHKELQLLCKLDHPGLAK 125
YTL + I RG+ V A G ++ A KK E++D F +E++++ LDHP + +
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 126 FVAAHAKPPNYMFFFEFYESRNLAEKL-HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ E L E++ H + S I + A+ Y H L +
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES--DAARIMKDVLSAVAYCHKLNVA 128
Query: 185 HRDVKPANVLL--DRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
HRD+KP N L D P L DFGLA + KP G + VGT
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLA---------------ARFKP--GKMMRTKVGT 171
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
Y++P++L+ ++ + D +S G+ + LL G P++
Sbjct: 172 PYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFS 208
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA + ++ + TG
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-------------EMTG----- 181
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 182 -XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF S +L + + + P + L QL + L + H+ ++H
Sbjct: 74 IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 129
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 130 RDLKPENLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 173
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
I G+ +V AT+ G+ VAVKK L + + E+ ++ H + + ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
EF E L + V + +Q+ + + +AL LH G++HRD+K
Sbjct: 92 VGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
++LL + L+DFG + KE+ +K +VGT +MAPE++
Sbjct: 150 SILLTHDGRVKLSDFGFCA--QVSKEVP--------------RRKXLVGTPYWMAPELIS 193
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ + + D++S GI + E++ G PY
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIXET 180
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
R GK + + +MAPE LK + + SD++SFG+ + E+ + P
Sbjct: 181 DXX--RKGGKG---------LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 229
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y L E V++ Y +Q P + L++ CW NP
Sbjct: 230 YQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFNPK 271
Query: 338 NRPSFSDIA 346
RP+F +I
Sbjct: 272 MRPTFLEIV 280
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIXET 183
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
R GK + + +MAPE LK + + SD++SFG+ + E+ + P
Sbjct: 184 DXX--RKGGKG---------LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y L E V++ Y +Q P + L++ CW NP
Sbjct: 233 YQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFNPK 274
Query: 338 NRPSFSDIA 346
RP+F +I
Sbjct: 275 MRPTFLEIV 283
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRK-----VAVKKPILSTSEELDNFHKELQLLCKL-D 119
+ LL I RG+ + V L VKK +++ E++D E + + +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
HP L + F E+ +L + + P + +A+++ AL YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE-EHARFYSAEISLALNYLH 138
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
GI++RD+K NVLLD L D+G+ +E L+ G T F
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC--KEGLR---------PGDTTSXF-----C 182
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
GT Y+APEIL+ E + D ++ G+ + E++ G P+
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
I G+ +V AT+ G+ VAVKK L + + E+ ++ H + + ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
EF E L + V + +Q+ + + +AL LH G++HRD+K
Sbjct: 88 VGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
++LL + L+DFG + KE+ +K +VGT +MAPE++
Sbjct: 146 SILLTHDGRVKLSDFGFCA--QVSKEVP--------------RRKXLVGTPYWMAPELIS 189
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ + + D++S GI + E++ G PY
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPI--LSTSEELDNFHKELQLLCKLD-HPG 122
Y L+ + +GA +V+++ G VAVKK S + +E+ +L +L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 123 LAKFVAAHAKPPNYMFFFEF-YESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ + + + F Y +L + P Q + QL K ++YLH+
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQ--YVVYQLIKVIKYLHSG 128
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK----- 236
G++HRD+KP+N+LL+ +ADFGL+ N++ ++ S + T F
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG 274
+ V T Y APEIL K D++S G + E+L G
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
Q+L+ A Q+ + + YLH +HR + NVLLD + + DFGLA+
Sbjct: 112 QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK------------ 159
Query: 223 WRSSGKPTGGFH---KKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
P G + +++ + + APE LK+ SDV+SFG+++ ELLT Y
Sbjct: 160 ----AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YC 211
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG--------LPASILSLIQRC 331
D + +T+ Q+T LR + LE G P I L++ C
Sbjct: 212 DSNQSPHTKFTELIGHTQGQMTV------LR-LTELLERGERLPRPDRCPCEIYHLMKNC 264
Query: 332 WDGNPHNRPSFSDIA 346
W+ RP+F ++
Sbjct: 265 WETEASFRPTFQNLV 279
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y L+P+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 31 PERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 89
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 149
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 150 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 192
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 193 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 237
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 32/178 (17%)
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
Q+AK + +L + +HRD+ N+LL + DFGLA + +N +K
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG------- 228
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAH 288
N + +MAPE + +++ +SDV+S+GI + EL + G PY + +++ +
Sbjct: 229 -------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
+++ + L P A PA + +++ CWD +P RP+F I
Sbjct: 282 KMIKEGFRM-----------LSPEHA------PAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
Q+L+ A Q+ + + YLH +HR + NVLLD + + DFGLA+
Sbjct: 113 QLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK------------ 160
Query: 223 WRSSGKPTGGFH---KKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
P G + +++ + + APE LK+ SDV+SFG+++ ELLT Y
Sbjct: 161 ----AVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT----YC 212
Query: 280 DLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELG--------LPASILSLIQRC 331
D + +T+ Q+T LR + LE G P I L++ C
Sbjct: 213 DSNQSPHTKFTELIGHTQGQMTV------LR-LTELLERGERLPRPDRCPCEIYHLMKNC 265
Query: 332 WDGNPHNRPSFSDIA 346
W+ RP+F ++
Sbjct: 266 WETEASFRPTFQNLV 280
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
I G+ +V AT+ G+ VAVKK L + + E+ ++ H + + ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
EF E L + V + +Q+ + + +AL LH G++HRD+K
Sbjct: 99 VGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
++LL + L+DFG + KE+ +K +VGT +MAPE++
Sbjct: 157 SILLTHDGRVKLSDFGFCA--QVSKEVP--------------RRKXLVGTPYWMAPELIS 200
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ + + D++S GI + E++ G PY
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILS-TSEELDNFHK----ELQLLCKLDH 120
Y L + G + VY+A + VA+KK L SE D ++ E++LL +L H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESR-NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
P + + A N F+F E+ + K + +PS + M+ + L+YLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT--LQGLEYLH 129
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
I+HRD+KP N+LLD N LADFGLA +S G P + + V
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLA--------------KSFGSPNRAY--XHQV 173
Query: 240 GTLIYMAPEIL-KKEIHSEKSDVYSFGISINELLTGV 275
T Y APE+L ++ D+++ G + ELL V
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 37/190 (19%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
PS+ +++ +A ++A + YL+ VHRD+ N ++ + + DFG+ ++ E
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIXET 185
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
R GK + + +M+PE LK + + SDV+SFG+ + E+ T P
Sbjct: 186 DXX--RKGGKG---------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 234
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGL--RPILASLELGLPASILSLIQRCWDGN 335
Y L + +Q+ V+ GGL +P P + L++ CW N
Sbjct: 235 YQGL--------------SNEQVLRFVMEGGLLDKPD------NCPDMLFELMRMCWQYN 274
Query: 336 PHNRPSFSDI 345
P RPSF +I
Sbjct: 275 PKMRPSFLEI 284
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 65 PSSYTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKL 118
P L P+ GA V Y+A L +KVAVKK P S + +EL+LL L
Sbjct: 27 PQRLQGLRPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTY-RELRLLKHL 84
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKAL 175
H + + + F E Y L L+ V+ + S + V + QL + L
Sbjct: 85 KHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGL 144
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
+Y+H+ GI+HRD+KP+NV ++ + + DFGLA R + + G+
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA--------------RQADEEMTGY-- 188
Query: 236 KNMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG 274
V T Y APEI+ +H ++ D++S G + ELL G
Sbjct: 189 ---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
I G+ +V AT+ G+ VAVKK L + + E+ ++ H + + ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
EF E L + V + +Q+ + + +AL LH G++HRD+K
Sbjct: 142 VGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
++LL + L+DFG + KE+ +K +VGT +MAPE++
Sbjct: 200 SILLTHDGRVKLSDFGFCA--QVSKEVP--------------RRKXLVGTPYWMAPELIS 243
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ + + D++S GI + E++ G PY
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 60 PLHLPPSSYTLLSPIARGAESVVYEATLDGRK-----VAVKKPILSTSEELDNFHKELQL 114
PL L + LL I RG+ + V L VKK +++ E++D E +
Sbjct: 5 PLGL--QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 62
Query: 115 LCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAK 173
+ +HP L + F E+ +L + + P + +A+++
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE-EHARFYSAEISL 121
Query: 174 ALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
AL YLH GI++RD+K NVLLD L D+G+ +E L+ G T F
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMC--KEGLR---------PGDTTSXF 170
Query: 234 HKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
GT Y+APEIL+ E + D ++ G+ + E++ G P+
Sbjct: 171 -----CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
I G+ +V AT+ G+ VAVKK L + + E+ ++ H + + ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
EF E L + V + +Q+ + + +AL LH G++HRD+K
Sbjct: 97 VGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
++LL + L+DFG + KE+ +K +VGT +MAPE++
Sbjct: 155 SILLTHDGRVKLSDFGFCA--QVSKEVP--------------RRKXLVGTPYWMAPELIS 198
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ + + D++S GI + E++ G PY
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKV-----AVKKPILSTSEELDNFHKELQLLCKL-DHP 121
+ LL I RG+ + V L VKK +++ E++D E + + +HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
L + F E+ +L + + P + +A+++ AL YLH
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE-EHARFYSAEISLALNYLHER 172
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
GI++RD+K NVLLD L D+G+ +E L+ G T F GT
Sbjct: 173 GIIYRDLKLDNVLLDSEGHIKLTDYGMC--KEGLR---------PGDTTSTF-----CGT 216
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
Y+APEIL+ E + D ++ G+ + E++ G P+
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 23 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 81
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLA--------------RHTDDEMTGY--- 184
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 185 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 92 VAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VAVK + E++D N +E+ L HP + +F P + E+ L E
Sbjct: 47 VAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL--ADFGL 208
++ S D+ QL + Y H + + HRD+K N LLD + P L ADFG
Sbjct: 105 RI-CNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGY 163
Query: 209 AEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEI-LKKEIHSEKSDVYSFGIS 267
+ K +P K+ VGT Y+APE+ LKKE + +DV+S G++
Sbjct: 164 S-----------KASVLHSQP------KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 268 INELLTGVVPYTD 280
+ +L G P+ D
Sbjct: 207 LYVMLVGAYPFED 219
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 170
Query: 246 APEI-LKKEIHSEKSDVYSFGISINELLT 273
APEI L + +S D++S G E++T
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 27 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 85
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLA--------------RHTDDEMTGY--- 188
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 189 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPENLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 78 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 133
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 177
Query: 246 APEI-LKKEIHSEKSDVYSFGISINELLT 273
APEI L + +S D++S G E++T
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 41/230 (17%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVK---------KPILSTSEELDNFHKELQLLC 116
Y L I +G SVV G++ AVK P LST ++ +E +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST----EDLKREASICH 83
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE-----WSPSVDQVLMIAAQL 171
L HP + + + ++ FEF + +L ++ +S +V M Q+
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM--RQI 141
Query: 172 AKALQYLHNLGIVHRDVKPANVLL--DRNLCP-HLADFGLAEYRENLKEISLKNWRSSGK 228
+AL+Y H+ I+HRDVKP VLL N P L FG+A I L SG
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--------IQLGE---SGL 190
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
GG VGT +MAPE++K+E + + DV+ G+ + LL+G +P+
Sbjct: 191 VAGG-----RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 24/220 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQL---LCKL-DHPGL 123
Y L + +GA SVV I++T + H++L+ +C+L HP +
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 124 AKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ + ++ + F+ L E + E+ D I Q+ +++ ++H I
Sbjct: 93 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH-QILESVNHIHQHDI 151
Query: 184 VHRDVKPANVLLD---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
VHRD+KP N+LL + LADFGLA I ++ G+ F G
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLA--------IEVQ-----GEQQAWF---GFAG 195
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
T Y++PE+L+K+ + + D+++ G+ + LL G P+ D
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWD 235
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 125
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 169
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRK-----VAVKKPILSTSEELDNFHKELQLLCKL-D 119
+ LL I RG+ + V L VKK +++ E++D E + + +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
HP L + F E+ +L + + P + +A+++ AL YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE-EHARFYSAEISLALNYLH 123
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
GI++RD+K NVLLD L D+G+ +E L+ G T F
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC--KEGLR---------PGDTTSXF-----C 167
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
GT Y+APEIL+ E + D ++ G+ + E++ G P+
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 127
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 171
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 37/191 (19%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHR++ N ++ + + DFG+ ++ E
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT---RDIYET 184
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLI--YMAPEILKKEIHSEKSDVYSFGISINELLT-GV 275
+++K G L +MAPE LK + + SD++SFG+ + E+ +
Sbjct: 185 D-------------YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 231
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGN 335
PY L E V++ Y +Q P + L++ CW N
Sbjct: 232 QPYQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFN 273
Query: 336 PHNRPSFSDIA 346
P+ RP+F +I
Sbjct: 274 PNMRPTFLEIV 284
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLSFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 40/284 (14%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+ P T L + G VV G+ K I S D F +E +++ L H
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
L + K E+ + L L Q+L + + +A++YL +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL 242
+HRD+ N L++ ++DFGL+ Y + + + R S P
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSRGSKFPVR----------- 171
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ PE+L S KSD+++FG+ + E+ + G +PY +T + T
Sbjct: 172 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE--------------RFTNSE-T 215
Query: 302 AAVVSGGL---RPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
A ++ GL RP LAS + +++ CW RP+F
Sbjct: 216 AEHIAQGLRLYRPHLAS------EKVYTIMYSCWHEKADERPTF 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGL R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLC--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 127
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 171
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 74 IARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHA 131
I G+ +V AT+ G+ VAVKK L + + E+ ++ H + + ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
EF E L + V + +Q+ + + +AL LH G++HRD+K
Sbjct: 219 VGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 192 NVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
++LL + L+DFG + KE+ +K +VGT +MAPE++
Sbjct: 277 SILLTHDGRVKLSDFGFCA--QVSKEVP--------------RRKXLVGTPYWMAPELIS 320
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPY 278
+ + + D++S GI + E++ G PY
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 41/230 (17%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVK---------KPILSTSEELDNFHKELQLLC 116
Y L I +G SVV G++ AVK P LST ++ +E +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST----EDLKREASICH 81
Query: 117 KLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEE-----WSPSVDQVLMIAAQL 171
L HP + + + ++ FEF + +L ++ +S +V M Q+
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM--RQI 139
Query: 172 AKALQYLHNLGIVHRDVKPANVLL--DRNLCP-HLADFGLAEYRENLKEISLKNWRSSGK 228
+AL+Y H+ I+HRDVKP VLL N P L FG+A I L SG
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--------IQLGE---SGL 188
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
GG VGT +MAPE++K+E + + DV+ G+ + LL+G +P+
Sbjct: 189 VAGG-----RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 92 VAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VAVK + E++D N +E+ L HP + +F P + E+ L E
Sbjct: 46 VAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 103
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL--ADFGL 208
++ S D+ QL + Y H + + HRD+K N LLD + P L DFG
Sbjct: 104 RI-CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 162
Query: 209 AEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEI-LKKEIHSEKSDVYSFGIS 267
+ K+ +P K+ VGT Y+APE+ LKKE + +DV+S G++
Sbjct: 163 S-----------KSSVLHSQP------KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 205
Query: 268 INELLTGVVPYTD 280
+ +L G P+ D
Sbjct: 206 LYVMLVGAYPFED 218
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 33/189 (17%)
Query: 159 PSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
P++ +++ +AA++A + YL+ VHR++ N ++ + + DFG+ ++ E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT---RDIYET 183
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVP 277
+R GK + + +MAPE LK + + SD++SFG+ + E+ + P
Sbjct: 184 DY--YRKGGKG---------LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPH 337
Y L E V++ Y +Q P + L++ CW NP+
Sbjct: 233 YQGLSNEQVLKFVMDGGYLDQPDNC------------------PERVTDLMRMCWQFNPN 274
Query: 338 NRPSFSDIA 346
RP+F +I
Sbjct: 275 MRPTFLEIV 283
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 49/279 (17%)
Query: 91 KVAVKKPIL--STSEELDNFHKELQLLCKLDHPGLAKFVA-----AHAKPPNYMFFFEFY 143
KVAVK L S+ E++ F E + HP + + + + P M F
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 144 ESRNLAEKLHVE--EWSPS---VDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRN 198
+ +L L E P + +L +A ++YL N +HRD+ N +L +
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD 183
Query: 199 LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL--IYMAPEILKKEIHS 256
+ +ADFGL+ K+I +G ++++ + + ++A E L +++
Sbjct: 184 MTVCVADFGLS------KKIY----------SGDYYRQGRIAKMPVKWIAIESLADRVYT 227
Query: 257 EKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILAS 315
KSDV++FG+++ E+ T G+ PY ++ +L + +Q
Sbjct: 228 SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCL------------ 275
Query: 316 LELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLE 354
+ ++ CW +P +RP+FS + L+L+ +LE
Sbjct: 276 ------DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 74 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 129
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 173
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 73 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 128
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 172
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 73 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 128
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 129 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 172
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 125
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 169
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 127
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 128 RDLKPENLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 171
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 74 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 129
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 173
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 25/235 (10%)
Query: 67 SYTLLSPIARG--AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y LL I +G A+ + L G++VAVK K L++S L +E++++ L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSS-LQKLFREVRIMKVLNHP 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K E+ + + L V + Q+ A+QY H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+K N+LLD ++ +ADFG S + T G G+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGF-----------------SNEFTFGNKLDTFCGS 175
Query: 242 LIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 75 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 130
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 174
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 127
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 128 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 171
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 25/235 (10%)
Query: 67 SYTLLSPIARG--AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y LL I +G A+ + L G++VAVK K L++S L +E++++ L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSS-LQKLFREVRIMKVLNHP 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K E+ + + L V + Q+ A+QY H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+K N+LLD ++ +ADFG S + T G G+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGF-----------------SNEFTFGNKLDTFCGS 175
Query: 242 LIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 68 YTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQL---LCKL-DHP 121
Y L + +GA SVV G++ A K I++T + H++L+ +C+L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAK--IINTKKLSARDHQKLEREARICRLLKHP 63
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ + + ++ + F+ L E + E+ D I Q+ +++ + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILESVNHCHLN 122
Query: 182 GIVHRDVKPANVLL---DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
GIVHRD+KP N+LL + LADFGLA I ++ G F
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLA--------IEVQ-----GDQQAWF---GF 166
Query: 239 VGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+L+K+ + + D+++ G+ + LL G P+ D
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 125
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 169
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 73 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 128
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 129 RDLKPENLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 172
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 78 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 133
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 134 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 177
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 131/319 (41%), Gaps = 59/319 (18%)
Query: 62 HLPPSSYTLLSPIARGAESVVYEATLDG---------RKVAVKK-PILSTSEELDNFHKE 111
LP L P+ GA V A G KVAVK +T ++L + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 112 LQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL---------------HVE 155
++++ + H + + A + E+ NL E L H
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 156 EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENL 215
E S ++ A Q+A+ ++YL + +HRD+ NVL+ + +ADFGLA ++
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDI 200
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-G 274
I ++G+ + +MAPE L I++ +SDV+SFG+ + E+ T G
Sbjct: 201 HHIDXXKKTTNGR-----------LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 275 VVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDG 334
PY + E + E + + +P + EL + +++ CW
Sbjct: 250 GSPYPGVPVEELFKLLKEGHRMD------------KPSNCTNELYM------MMRDCWHA 291
Query: 335 NPHNRPSFSDIALELDLVL 353
P RP+F + +LD ++
Sbjct: 292 VPSQRPTFKQLVEDLDRIV 310
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 68 YTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQL---LCKL-DHP 121
Y L + +GA SVV G++ A K I++T + H++L+ +C+L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAK--IINTKKLSARDHQKLEREARICRLLKHP 63
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ + + ++ + F+ L E + E+ D I Q+ +++ + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILESVNHCHLN 122
Query: 182 GIVHRDVKPANVLL---DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
GIVHRD+KP N+LL + LADFGLA I ++ G F
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLA--------IEVQ-----GDQQAWF---GF 166
Query: 239 VGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
GT Y++PE+L+K+ + + D+++ G+ + LL G P+ D
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 125
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 169
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 75 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 130
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 131 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 174
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 24/218 (11%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD-----NFHKELQLLCKLDH 120
+ ++ P+ +G VY A K + +L S+ +E+++ L H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
P + + EF L ++L + + +LA AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHE 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP N+L+ +ADFG + + +L+ ++ M G
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR------------------RRXMCG 174
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
TL Y+ PE+++ + H EK D++ G+ E L G+ P+
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 40/284 (14%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+ P T L + G VV G+ K I S D F +E +++ L H
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
L + K E+ + L L Q+L + + +A++YL +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL 242
+HRD+ N L++ ++DFGL+ Y + +E S S G +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-----SVGSKF----------PV 185
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+ PE+L S KSD+++FG+ + E+ + G +PY +T + T
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE--------------RFTNSE-T 230
Query: 302 AAVVSGGL---RPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
A ++ GL RP LAS + +++ CW RP+F
Sbjct: 231 AEHIAQGLRLYRPHLAS------EKVYTIMYSCWHEKADERPTF 268
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 158 SPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKE 217
S + Q+L+ A Q+ + + YLH +HRD+ NVLLD + + DFGLA+ E
Sbjct: 130 SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189
Query: 218 ISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGV-- 275
R G + + APE LK+ SDV+SFG+++ ELLT
Sbjct: 190 XY--RVREDGD-----------SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS 236
Query: 276 -----VPYTDLRAEAQAH-TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+ +L AQ TVL +LT + G P PA + L++
Sbjct: 237 SQSPPTKFLELIGIAQGQMTVL-------RLTELLERGERLPRPDK----CPAEVYHLMK 285
Query: 330 RCWDGNPHNRPSFSDIALELDLVLE 354
CW+ RP+F ++ L V E
Sbjct: 286 NCWETEASFRPTFENLIPILKTVHE 310
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + D+GLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDYGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+N +E+ L HP + +F P + E+ L E++ S D+
Sbjct: 61 ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI-CNAGRFSEDEAR 119
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL--ADFGLAEYRENLKEISLKNW 223
QL + Y H++ I HRD+K N LLD + P L DFG + K+
Sbjct: 120 FFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-----------KSS 168
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
+P K+ VGT Y+APE+ L++E + +DV+S G+++ +L G P+ D
Sbjct: 169 VLHSQP------KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 27/237 (11%)
Query: 66 SSYTLLSPIARG--AESVVYEATLDGRKVAVKKPILSTSE----ELDNFHKELQLLCKLD 119
+Y LL I +G A+ + L GR+VA+K I+ ++ L +E++++ L+
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIK--IIDKTQLNPTSLQKLFREVRIMKILN 69
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
HP + K E+ + + L V + Q+ A+QY H
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
IVHRD+K N+LLD ++ +ADFG S + T G
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGF-----------------SNEFTVGGKLDTFC 171
Query: 240 GTLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
G+ Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKVVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + F + Y NL++ + +E + +L Q+ ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY---QMLVGIK 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+ GI+HRD+KP+N+++ + + DFGLA R++G F
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--------------RTAGT---SFMMT 183
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
V T Y APE++ + E D++S G+ + E++ G V P TD
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + P + L QL + L + H+ ++H
Sbjct: 74 IHTENKLYLVFEFLH-QDLKTFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 129
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 130 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWYR 173
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 24/234 (10%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPILST-SEELDNFHKELQLLCKLDHPGLA 124
Y L I G + V A L G VA+K +T +L E++ L L H +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ E+ L + + + + S ++ ++ Q+ A+ Y+H+ G
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYI-ISQDRLSEEETRVVFRQIVSAVAYVHSQGYA 130
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGG--FHKKNMVGTL 242
HRD+KP N+L D L DFGL KP G +H + G+L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLC-----------------AKPKGNKDYHLQTCCGSL 173
Query: 243 IYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
Y APE+++ K ++DV+S GI + L+ G +P+ D A ++ Y
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKVVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + F + Y NL++ + +E + +L Q+ ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY---QMLVGIK 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+ GI+HRD+KP+N+++ + + DFGLA R++G F
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--------------RTAGT---SFMMT 183
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
V T Y APE++ + E D++S G+ + E++ G V P TD
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 34/231 (14%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDN-----FHKELQLL 115
L + Y ++ I RGA V + +LS E + F +E ++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH----VEEWSPSVDQVLMIAAQL 171
+ P + + A E+ +L + E+W+ A++
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAK------FYTAEV 183
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
AL +H++G++HRDVKP N+LLD++ LADFG + TG
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE---------------TG 228
Query: 232 GFHKKNMVGTLIYMAPEILKKE----IHSEKSDVYSFGISINELLTGVVPY 278
H VGT Y++PE+LK + + + D +S G+ + E+L G P+
Sbjct: 229 MVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 17/119 (14%)
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+V + ++ AL++LH LGI++RD+K N+LLD N L DFGL+ +E + + + +
Sbjct: 160 EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS--KEFVADETERA 217
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILK--KEIHSEKSDVYSFGISINELLTGVVPYT 279
+ + GT+ YMAP+I++ H + D +S G+ + ELLTG P+T
Sbjct: 218 Y-------------DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 25/235 (10%)
Query: 67 SYTLLSPIARG--AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y LL I +G A+ + L G++VAV+ K L++S L +E++++ L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSS-LQKLFREVRIMKVLNHP 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K E+ + + L V + Q+ A+QY H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+K N+LLD ++ +ADFG S + T G G+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGF-----------------SNEFTFGNKLDTFCGS 175
Query: 242 LIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 34/221 (15%)
Query: 65 PSSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNF----HKELQLLCKL 118
P +Y + + GA V A G KVA+KK LS + + F ++EL LL +
Sbjct: 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKK--LSRPFQSEIFAKRAYRELLLLKHM 98
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKA 174
H + + + F++FY + K+ E+S +++ + Q+ K
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSE--EKIQYLVYQMLKG 156
Query: 175 LQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFH 234
L+Y+H+ G+VHRD+KP N+ ++ + + DFGLA + + + TG
Sbjct: 157 LKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH-------------ADAEMTG--- 200
Query: 235 KKNMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG 274
V T Y APE++ +H ++ D++S G + E+LTG
Sbjct: 201 ---YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 68 YTLLSPIARGAESVVYEATLDGR---KVAVKKPILSTSEEL--DNFHKELQLLCKLDHPG 122
Y L P+ GA V A +DGR KVA+KK EL ++EL+LL + H
Sbjct: 27 YRDLQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHEN 85
Query: 123 LAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQY 177
+ + F +FY +L + + E+ D++ + Q+ K L+Y
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE--DRIQFLVYQMLKGLRY 143
Query: 178 LHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKN 237
+H GI+HRD+KP N+ ++ + + DFGLA R + G
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLA--------------RQADSEMXG----- 184
Query: 238 MVGTLIYMAPEILKKEI-HSEKSDVYSFGISINELLTG 274
V T Y APE++ + +++ D++S G + E++TG
Sbjct: 185 XVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 23/232 (9%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEEL---DNFHKELQLLCKLD 119
P Y + I G+ V EA L+ R VA+KK IL E+L +E+ +L +L+
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKK-ILRVFEDLIDCKRILREIAILNRLN 110
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKAL 175
H + K + P + F E Y +A+ KL + + + L +
Sbjct: 111 HDHVVKVLDI-VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGV 169
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLA---EYRENLKEISLKNWRSSGKPTGG 232
+Y+H+ GI+HRD+KPAN L++++ + DFGLA +Y EN + R
Sbjct: 170 KYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 233 F-HKKNM-------VGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTGV 275
F H KN+ V T Y APE IL +E ++E DV+S G ELL +
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
Q+AK + +L + +HRD+ N+LL + DFGLA +N +K
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG------- 221
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAH 288
N + +MAPE + +++ +SDV+S+GI + EL + G PY + +++ +
Sbjct: 222 -------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 274
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+++ + L P A PA + +++ CWD +P RP+F I
Sbjct: 275 KMIKEGFRM-----------LSPEHA------PAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V + G K+AVKK P S + +EL+LL +
Sbjct: 50 PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 108
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DFGLA R + G+
Sbjct: 169 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--------------RHTDDEMTGY--- 211
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H + D++S G + ELLTG + P TD
Sbjct: 212 --VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
Q+AK + +L + +HRD+ N+LL + DFGLA +N +K
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG------- 205
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAH 288
N + +MAPE + +++ +SDV+S+GI + EL + G PY + +++ +
Sbjct: 206 -------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+++ + L P A PA + +++ CWD +P RP+F I
Sbjct: 259 KMIKEGFRM-----------LSPEHA------PAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 25/235 (10%)
Query: 67 SYTLLSPIARG--AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHP 121
+Y LL I +G A+ + L G++VAV+ K L++S L +E++++ L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSS-LQKLFREVRIMKVLNHP 73
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNL 181
+ K E+ + + L V + Q+ A+QY H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 182 GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
IVHRD+K N+LLD ++ +ADFG S + T G G+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGF-----------------SNEFTFGNKLDEFCGS 175
Query: 242 LIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
Q+AK + +L + +HRD+ N+LL + DFGLA +N +K
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG------- 228
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAH 288
N + +MAPE + +++ +SDV+S+GI + EL + G PY + +++ +
Sbjct: 229 -------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
+++ + L P A PA + +++ CWD +P RP+F I
Sbjct: 282 KMIKEGFRM-----------LSPEHA------PAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
Q+AK + +L + +HRD+ N+LL + DFGLA +N +K
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG------- 223
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAH 288
N + +MAPE + +++ +SDV+S+GI + EL + G PY + +++ +
Sbjct: 224 -------NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 276
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
+++ + L P A PA + +++ CWD +P RP+F I
Sbjct: 277 KMIKEGFRM-----------LSPEHA------PAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 66 SSYTLLSPIARG--AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDH 120
+Y LL I +G A+ + L G++VAVK K L++S L +E++++ L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSS-LQKLFREVRIMKVLNH 72
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
P + K E+ + + L V + Q+ A+QY H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
IVHRD+K N+LLD ++ +ADFG + N + G F G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS------------NEFTFGNKLDAF-----CG 174
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 27/237 (11%)
Query: 66 SSYTLLSPIARG--AESVVYEATLDGRKVAVKKPILSTSE----ELDNFHKELQLLCKLD 119
+Y LL I +G A+ + L GR+VA+K I+ ++ L +E++++ L+
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIK--IIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
HP + K E+ + + L V + Q+ A+QY H
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
IVHRD+K N+LLD ++ +ADFG + N + G F
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFS------------NEFTVGGKLDAF-----C 174
Query: 240 GTLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
G Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 108/279 (38%), Gaps = 45/279 (16%)
Query: 73 PIARGAESVVYEATLDGRK--VAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFV 127
P+ +G VY A RK +A+K K L + +E+++ L HP + +
Sbjct: 12 PLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 128 AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQ-VLMIAAQLAKALQYLHNLGIVHR 186
E+ + +L ++ S +Q +LA AL Y H+ ++HR
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHR 129
Query: 187 DVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMA 246
D+KP N+LL +ADFG W S P+ + + GTL Y+
Sbjct: 130 DIKPENLLLGSAGELKIADFG---------------W-SVHAPSS--RRTTLCGTLDYLP 171
Query: 247 PEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVS 306
PE+++ +H EK D++S G+ E L G P+ A T ++ E V
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQETYKRISRVEFTFPDFVTE 228
Query: 307 GGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
G LI R NP RP ++
Sbjct: 229 GA----------------RDLISRLLKHNPSQRPMLREV 251
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 66 SSYTLLSPIARGAESVVYEATLDG--RKVAVKKPILSTSEELDNFHKELQLLCKLDHPGL 123
S Y L P+ G +V+ A + ++VA+KK +L+ + + + +E++++ +LDH +
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 124 AKFV-------------AAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQ-VLMIAA 169
K N ++ + Y +LA +V E P +++ +
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA---NVLEQGPLLEEHARLFMY 127
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLD-RNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
QL + L+Y+H+ ++HRD+KPAN+ ++ +L + DFGLA + ++ G
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD-------PHYSHKGH 180
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
+ G K + ++P K I D+++ G E+LTG + Q
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAI-----DMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235
Query: 289 TVLE 292
+LE
Sbjct: 236 LILE 239
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 91 KVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
K KK + ++N E+ +L K+ HP + + + + L +
Sbjct: 49 KCIAKKALEGKEGSMEN---EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL---LDRNLCPHLADFG 207
++ + + D +I Q+ A++YLH+LGIVHRD+KP N+L LD + ++DFG
Sbjct: 106 RIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
Query: 208 LAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGIS 267
L++ + +S GT Y+APE+L ++ +S+ D +S G+
Sbjct: 165 LSKMEDPGSVLS-----------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 268 INELLTGVVPYTDLRAEAQAHTVLEMNY 295
LL G P+ D +L+ Y
Sbjct: 208 AYILLCGYPPFYDENDAKLFEQILKAEY 235
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 85
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 146 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMVPFV 188
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 84
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPYV 187
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + DF LA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFYLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 56/292 (19%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHPG 122
Y L PI GA+ +V A T+ G VAVKK P + + ++EL LL ++H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA-KRAYRELVLLKCVNHKN 84
Query: 123 LAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQY 177
+ + F + Y NL + +H+E + +L Q+ +++
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY---QMLCGIKH 141
Query: 178 LHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKN 237
LH+ GI+HRD+KP+N+++ + + DFGLA R++ F
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTA---CTNFMMTP 184
Query: 238 MVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTE 297
V T Y APE++ ++ D++S G + EL+ G V + Q + V+E
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIE----- 239
Query: 298 QQLTAAVVSGGLRPILASLELGLP-ASILSLIQRCWDGNPHNRPSFSDIALE 348
+LG P A ++ +Q NRP + I E
Sbjct: 240 -------------------QLGTPSAEFMAALQPTVRNYVENRPKYPGIKFE 272
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 107 NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
N +E+ L HP + +F P + E+ L E++ S D+
Sbjct: 61 NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARF 119
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL--ADFGLAEYRENLKEISLKNWR 224
QL + Y H + + HRD+K N LLD + P L DFG + K+
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-----------KSSV 168
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
+P K+ VGT Y+APE+ LKKE + +DV+S G+++ +L G P+ D
Sbjct: 169 LHSQP------KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 159
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + ++ GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 160 PSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 214
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 215 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 255
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFV-A 128
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 129 AHAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIV 184
H + Y+ F ++ +L + + P + L QL + L + H+ ++
Sbjct: 70 IHTENKLYLVFEHVHQ--DLKTFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVL 124
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
HRD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 125 HRDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWY 168
Query: 245 MAPEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD-----NFHKELQLLCKLDH 120
+ + P+ +G VY A K + +L S+ +E+++ L H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
P + + EF L ++L + + +LA AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHE 132
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP N+L+ +ADFG + + +L+ ++ M G
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR------------------RRXMCG 174
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
TL Y+ PE+++ + H EK D++ G+ E L G+ P+
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + ++ GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 184
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + ++ GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 185 PSS--RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 239
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 240 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 280
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKXVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNL--AEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
+ + F + Y L A V + +++ + Q+ +++LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLA--------------RTAG---TSFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + ++ GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 89 GRKVAVKKPILSTS-EELDNFHKELQLLCKLDHPGLAKFVAAHAKP-------PNYM--F 138
G +VA+K+ S + + + E+Q++ KL+HP + V+A P PN +
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV---VSAREVPDGLQKLAPNDLPLL 96
Query: 139 FFEFYESRNLAEKLHVEEWSPSVDQ--VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD 196
E+ E +L + L+ E + + + + + ++ AL+YLH I+HRD+KP N++L
Sbjct: 97 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
Query: 197 ---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE 253
+ L + D G A KE+ G+ F VGTL Y+APE+L+++
Sbjct: 157 PGPQRLIHKIIDLGYA------KELD------QGELCTEF-----VGTLQYLAPELLEQK 199
Query: 254 IHSEKSDVYSFGISINELLTGVVPY 278
++ D +SFG E +TG P+
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 89 GRKVAVKKPILSTS-EELDNFHKELQLLCKLDHPGLAKFVAAHAKP-------PNYM--F 138
G +VA+K+ S + + + E+Q++ KL+HP + V+A P PN +
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV---VSAREVPDGLQKLAPNDLPLL 95
Query: 139 FFEFYESRNLAEKLHVEEWSPSVDQ--VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD 196
E+ E +L + L+ E + + + + + ++ AL+YLH I+HRD+KP N++L
Sbjct: 96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
Query: 197 ---RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE 253
+ L + D G A KE+ G+ F VGTL Y+APE+L+++
Sbjct: 156 PGPQRLIHKIIDLGYA------KELD------QGELCTEF-----VGTLQYLAPELLEQK 198
Query: 254 IHSEKSDVYSFGISINELLTGVVPY 278
++ D +SFG E +TG P+
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELD-----NFHKELQLLCKLDH 120
+ + P+ +G VY A K + +L S+ +E+++ L H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
P + + EF L ++L + + +LA AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHE 133
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP N+L+ +ADFG + + +L+ ++ M G
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR------------------RRXMCG 175
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
TL Y+ PE+++ + H EK D++ G+ E L G+ P+
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 161
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + ++ GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 162 PSS--RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 216
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 217 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 257
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + FGLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILGFGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 158 SPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKE 217
S + Q+L+ A Q+ + + YLH+ +HR++ NVLLD + + DFGLA+
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK------- 165
Query: 218 ISLKNWRSSGKPTGGFH---KKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTG 274
P G + +++ + + APE LK+ SDV+SFG+++ ELLT
Sbjct: 166 ---------AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 275 V-------VPYTDLRAEAQAH-TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILS 326
+ +L AQ TVL +LT + G P P +
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVL-------RLTELLERGERLPRPDK----CPCEVYH 265
Query: 327 LIQRCWDGNPHNRPSFSDIALELDLVLE 354
L++ CW+ RP+F ++ L V E
Sbjct: 266 LMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 163
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + ++ GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 164 PSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 218
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 219 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 259
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+ P T L + G VV G+ K I S D F +E +++ L H
Sbjct: 12 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 71
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
L + K E+ + L L Q+L + + +A++YL +
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT- 241
+HRD+ N L++ ++DFGL+ Y + + SS VG+
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRY------VLDDEYTSS------------VGSK 173
Query: 242 --LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQ 298
+ + PE+L S KSD+++FG+ + E+ + G +PY +T
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE--------------RFTNS 219
Query: 299 QLTAAVVSGGL---RPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ TA ++ GL RP LAS + +++ CW RP+F
Sbjct: 220 E-TAEHIAQGLRLYRPHLAS------EKVYTIMYSCWHEKADERPTF 259
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 120/308 (38%), Gaps = 46/308 (14%)
Query: 424 TYYPVLSWGSFATCGRRETMEDTHFLMPHMY-NQKEIHMFGIFDGHRGSAAAE------- 475
T YP F G R+ ED L P + + + FG+FDG G A+E
Sbjct: 17 TSYPAFDAAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVV 76
Query: 476 ---FSARALPGFLQNLGSTTRPTDA------LLEAFIRTDVAFRNELDSLRKSKRVVQKD 526
S+ A + L S T+ LL+ + D ++N + L K + KD
Sbjct: 77 PQLISSPAWQEVTEXLRSDVPATEVDEKLPQLLDQAV--DDXYKNADNELVKXCEQLNKD 134
Query: 527 WHPGCTAIAALIVRNRLFVANAGDCRAILC----RGGHPFALSRDHVASCLEERERVVSA 582
+ T++ A++ + + V + GD R G + L+ DH E+ R+
Sbjct: 135 YA-SSTSVTAVLAKGFVAVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRN 193
Query: 583 GGNVNWQVD------------TWRVG----PPALQVTRSIGDDDLKP-AVXXXXXXXXXX 625
GG+V + + ++R P LQ +R+ G DLK +
Sbjct: 194 GGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVR 253
Query: 626 XXXXDEYLVMASDGLWDVVSHVEAVGIIKDTVKE-----PGMCSKRLATEAAERGSKDNI 680
++A+DGLWDV S +AV I +E + LA + + S DNI
Sbjct: 254 VTPQHRVXILATDGLWDVXSAAQAVEIAXQARQEGRNPAQALVEXTLAEQQSRNQSADNI 313
Query: 681 TVIVVFLQ 688
T VF +
Sbjct: 314 TAXTVFFK 321
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 117/299 (39%), Gaps = 62/299 (20%)
Query: 68 YTLLSPIARGAESVVYEA------TLDGRKVAVKKPILSTS-EELDNFHKELQLLCKLDH 120
Y L I +G+ VV A + K+ K I + ++++ E++L+ KL H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHV-------------------------E 155
P +A+ + E +L +KL+V E
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 156 E--------WSPSVDQVLM------IAAQLAKALQYLHNLGIVHRDVKPANVLLDRN--L 199
E + S+D V I Q+ AL YLHN GI HRD+KP N L N
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207
Query: 200 CPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK--KEIHSE 257
L DFGL++ + L N G T GT ++APE+L E +
Sbjct: 208 EIKLVDFGLSK-----EFYKLNNGEYYGMTTKA-------GTPYFVAPEVLNTTNESYGP 255
Query: 258 KSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASL 316
K D +S G+ ++ LL G VP+ + VL + V+S R +L++L
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNL 314
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFV-A 128
I G VVY+A L G VA+KK L T E +E+ LL +L+HP + K +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 129 AHAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIV 184
H + Y+ F + ++L + + + P + L QL + L + H+ ++
Sbjct: 74 IHTENKLYLVFE--HVDQDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVL 128
Query: 185 HRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
HRD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 129 HRDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTYXHE--VVTLWY 172
Query: 245 MAPEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKVVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + F + Y NL++ + +E + +L Q+ ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY---QMLVGIK 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+ GI+HRD+KP+N+++ + + DFGLA R++G F
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--------------RTAGT---SFMMT 183
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
V T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 153 HVEEWSPSVDQ--VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
+V+E +P + + AQ+ L++LH I++RD+KP NVLLD + ++D GLA
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA- 336
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+ LK G K GT +MAPE+L E + D ++ G+++ E
Sbjct: 337 -------VELK--------AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 271 LLTGVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
++ P+ R E + L+ EQ +T
Sbjct: 382 MIAARGPFR-ARGEKVENKELKQRVLEQAVT 411
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 39/241 (16%)
Query: 74 IARGAESVV----YEATLDGRKVAVKKPILS----TSEELDNFH----KELQLLCKL-DH 120
I RG SVV + AT G + AVK ++ + E+L+ +E +L ++ H
Sbjct: 102 IGRGVSSVVRRCVHRAT--GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
P + + ++ F+ L + L E+ + S + I L +A+ +LH
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
IVHRD+KP N+LLD N+ L+DFG + + E G + + G
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE-----------------PGEKLRELCG 261
Query: 241 TLIYMAPEILK---KEIH---SEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMN 294
T Y+APEILK E H ++ D+++ G+ + LL G P+ R ++E
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ 321
Query: 295 Y 295
Y
Sbjct: 322 Y 322
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 153 HVEEWSPSVDQ--VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
+V+E +P + + AQ+ L++LH I++RD+KP NVLLD + ++D GLA
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA- 336
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+ LK G K GT +MAPE+L E + D ++ G+++ E
Sbjct: 337 -------VELK--------AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 271 LLTGVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
++ P+ R E + L+ EQ +T
Sbjct: 382 MIAARGPFR-ARGEKVENKELKQRVLEQAVT 411
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+ K L T E +E+ LL +L+HP + K +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 126
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 170
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 74 IARGAESVVYEA--TLDGRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGLAKFVAA 129
I G VVY+A L G VA+ K L T E +E+ LL +L+HP + K +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 130 HAKPPNYMFFFEFYESRNLAEKLHVEEWS----PSVDQVLMIAAQLAKALQYLHNLGIVH 185
FEF ++L + + + P + L QL + L + H+ ++H
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLF---QLLQGLAFCHSHRVLH 125
Query: 186 RDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYM 245
RD+KP N+L++ LADFGLA R+ G P + + V TL Y
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLA--------------RAFGVPVRTY--THEVVTLWYR 169
Query: 246 APEILKK-EIHSEKSDVYSFGISINELLT 273
APEIL + +S D++S G E++T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+ P T L + G VV G+ K I S D F +E +++ L H
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
L + K E+ + L L Q+L + + +A++YL +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT- 241
+HRD+ N L++ ++DFGL+ Y + + SS VG+
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRY------VLDDEYTSS------------VGSK 167
Query: 242 --LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQ 298
+ + PE+L S KSD+++FG+ + E+ + G +PY +T
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE--------------RFTNS 213
Query: 299 QLTAAVVSGGL---RPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ TA ++ GL RP LAS + +++ CW RP+F
Sbjct: 214 E-TAEHIAQGLRLYRPHLAS------EKVYTIMYSCWHEKADERPTF 253
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNF----HKELQLLCKL 118
P +Y + + GA V A G KVA+KK LS + + F ++EL LL +
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKK--LSRPFQSEIFAKRAYRELLLLKHM 80
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEK--LHVEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F++FY + + S +++ + Q+ K L+
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ G+VHRD+KP N+ ++ + + DFGLA + + + TG
Sbjct: 141 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH-------------ADAEMTG----- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG 274
V T Y APE++ +H ++ D++S G + E+LTG
Sbjct: 183 -YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 153 HVEEWSPSVDQ--VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
+V+E +P + + AQ+ L++LH I++RD+KP NVLLD + ++D GLA
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA- 336
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+ LK G K GT +MAPE+L E + D ++ G+++ E
Sbjct: 337 -------VELK--------AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 271 LLTGVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
++ P+ R E + L+ EQ +T
Sbjct: 382 MIAARGPFR-ARGEKVENKELKQRVLEQAVT 411
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 153 HVEEWSPSVDQ--VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
+V+E +P + + AQ+ L++LH I++RD+KP NVLLD + ++D GLA
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA- 336
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+ LK G K GT +MAPE+L E + D ++ G+++ E
Sbjct: 337 -------VELK--------AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE 381
Query: 271 LLTGVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
++ P+ R E + L+ EQ +T
Sbjct: 382 MIAARGPFR-ARGEKVENKELKQRVLEQAVT 411
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPEV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 44/294 (14%)
Query: 42 KVLEPNTCIRGC-CSSQSIPLHLPPSSYTLLSPIARGAESVVYEA------------TLD 88
K +E + R C + + +HL + +++ I RG VY LD
Sbjct: 164 KFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 223
Query: 89 GRKVAVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRN 147
+++ +K+ L+ +E + L L+ D P + A P F + +
Sbjct: 224 KKRIKMKQGETLALNERI-----MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD 278
Query: 148 LAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFG 207
L L D + AA++ L+++HN +V+RD+KPAN+LLD + ++D G
Sbjct: 279 LHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 337
Query: 208 LAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGI 266
LA + S K +S VGT YMAPE+L+K + + +D +S G
Sbjct: 338 LA------CDFSKKKPHAS------------VGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+ +LL G P+ + + + H + M T A + P L SL GL
Sbjct: 380 MLFKLLRGHSPFRQHKTKDK-HEIDRMTLT----MAVELPDSFSPELRSLLEGL 428
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 44/294 (14%)
Query: 42 KVLEPNTCIRGC-CSSQSIPLHLPPSSYTLLSPIARGAESVVYEA------------TLD 88
K +E + R C + + +HL + +++ I RG VY LD
Sbjct: 164 KFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 223
Query: 89 GRKVAVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRN 147
+++ +K+ L+ +E + L L+ D P + A P F + +
Sbjct: 224 KKRIKMKQGETLALNERI-----MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD 278
Query: 148 LAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFG 207
L L D + AA++ L+++HN +V+RD+KPAN+LLD + ++D G
Sbjct: 279 LHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 337
Query: 208 LAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGI 266
LA + S K +S VGT YMAPE+L+K + + +D +S G
Sbjct: 338 LA------CDFSKKKPHAS------------VGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+ +LL G P+ + + + H + M T A + P L SL GL
Sbjct: 380 MLFKLLRGHSPFRQHKTKDK-HEIDRMTLT----MAVELPDSFSPELRSLLEGL 428
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 44/294 (14%)
Query: 42 KVLEPNTCIRGC-CSSQSIPLHLPPSSYTLLSPIARGAESVVYEA------------TLD 88
K +E + R C + + +HL + +++ I RG VY LD
Sbjct: 164 KFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 223
Query: 89 GRKVAVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRN 147
+++ +K+ L+ +E + L L+ D P + A P F + +
Sbjct: 224 KKRIKMKQGETLALNERI-----MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD 278
Query: 148 LAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFG 207
L L D + AA++ L+++HN +V+RD+KPAN+LLD + ++D G
Sbjct: 279 LHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 337
Query: 208 LAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGI 266
LA + S K +S VGT YMAPE+L+K + + +D +S G
Sbjct: 338 LA------CDFSKKKPHAS------------VGTHGYMAPEVLQKGVAYDSSADWFSLGC 379
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+ +LL G P+ + + + H + M T A + P L SL GL
Sbjct: 380 MLFKLLRGHSPFRQHKTKDK-HEIDRMTLT----MAVELPDSFSPELRSLLEGL 428
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 44/294 (14%)
Query: 42 KVLEPNTCIRGC-CSSQSIPLHLPPSSYTLLSPIARGAESVVYEA------------TLD 88
K +E + R C + + +HL + +++ I RG VY LD
Sbjct: 163 KFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 222
Query: 89 GRKVAVKK-PILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRN 147
+++ +K+ L+ +E + L L+ D P + A P F + +
Sbjct: 223 KKRIKMKQGETLALNERI-----MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD 277
Query: 148 LAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFG 207
L L D + AA++ L+++HN +V+RD+KPAN+LLD + ++D G
Sbjct: 278 LHYHLSQHGVFSEAD-MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 336
Query: 208 LAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGI 266
LA + S K +S VGT YMAPE+L+K + + +D +S G
Sbjct: 337 LA------CDFSKKKPHAS------------VGTHGYMAPEVLQKGVAYDSSADWFSLGC 378
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+ +LL G P+ + + + H + M T A + P L SL GL
Sbjct: 379 MLFKLLRGHSPFRQHKTKDK-HEIDRMTLT----MAVELPDSFSPELRSLLEGL 427
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 107 NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
+ E+ +L K+ HP + + + + L +++ + + D +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVL---LDRNLCPHLADFGLAEYRENLKEISLKNW 223
I Q+ A++YLH+LGIVHRD+KP N+L LD + ++DFGL++ + +S
Sbjct: 122 IF-QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS---- 176
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRA 283
GT Y+APE+L ++ +S+ D +S G+ LL G P+ D
Sbjct: 177 -------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 223
Query: 284 EAQAHTVLEMNY 295
+L+ Y
Sbjct: 224 AKLFEQILKAEY 235
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 159
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 160 PSS--RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 214
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 215 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 255
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKXVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLA--------------RTAG---TSFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 106/266 (39%), Gaps = 21/266 (7%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAK 125
Y + + GA VV+ T G A K + + + KE+Q + L HP L
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 126 FVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVH 185
A + +EF L EK+ E S D+ + Q+ K L ++H VH
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278
Query: 186 RDVKPANVLL--DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
D+KP N++ R+ L DFGL + + + + K GT
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-----------------KVTTGTAE 321
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAA 303
+ APE+ + + +D++S G+ LL+G+ P+ + V ++ +
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 381
Query: 304 VVSGGLRPILASLELGLPASILSLIQ 329
+S + + L L P + +++ Q
Sbjct: 382 GISEDGKDFIRKLLLADPNTRMTIHQ 407
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+ +E+ +L ++ HP + + + + E L + L +E S S ++
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEAT 118
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNL-CPH--LADFGLAEYRENLKEISLK 221
Q+ + YLH I H D+KP N+ LLD+N+ PH L DFGLA E+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED------- 171
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 172 ----------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 281 LRAEAQAH-TVLEMNYTEQ 298
+ E A+ T + ++ E+
Sbjct: 222 TKQETLANITAVSYDFDEE 240
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 163
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 164 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 218
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 219 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 259
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+ P T L + G VV G+ K I S D F +E +++ L H
Sbjct: 5 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 64
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
L + K E+ + L L Q+L + + +A++YL +
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT- 241
+HRD+ N L++ ++DFGL+ Y + + SS VG+
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRY------VLDDEYTSS------------VGSK 166
Query: 242 --LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQ 298
+ + PE+L S KSD+++FG+ + E+ + G +PY +T
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE--------------RFTNS 212
Query: 299 QLTAAVVSGGL---RPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ TA ++ GL RP LAS + +++ CW RP+F
Sbjct: 213 E-TAEHIAQGLRLYRPHLAS------EKVYTIMYSCWHEKADERPTF 252
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 161
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 162 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 216
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 217 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 257
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + F + Y NL++ + +E + +L Q+ ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY---QMLCGIK 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+ GI+HRD+KP+N+++ + + DFGLA R++G F
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMT 183
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
V T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 90 RKVAVKKPILSTSEELD---NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESR 146
R ++ +K + ++ E D N E+++L KL+HP + K + +Y E E
Sbjct: 180 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGG 238
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRNLCPHL 203
L +K+ V + Q+ A+QYLH GI+HRD+KP NVLL + + +
Sbjct: 239 ELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 297
Query: 204 ADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIHSEKSD 260
DFG + + L E SL + + GT Y+APE+L ++ D
Sbjct: 298 TDFG---HSKILGETSL--------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVD 340
Query: 261 VYSFGISINELLTGVVPYTDLRAEA 285
+S G+ + L+G P+++ R +
Sbjct: 341 CWSLGVILFICLSGYPPFSEHRTQV 365
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 157
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 158 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 212
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 213 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 253
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 163
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 164 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 218
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 219 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 161
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 162 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 216
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 217 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 132 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 175
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 176 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 230
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 231 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 271
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + D GLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDAGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKVVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + F + Y NL++ + +E + +L Q+ ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY---QMLCGIK 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+ GI+HRD+KP+N+++ + + DFGLA R++G F
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--------------RTAGT---SFMMT 183
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
V T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 162
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 163 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 217
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 218 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 106
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 107 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 155
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 156 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 212 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 253
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 254 RPGFAAVELRL 264
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKXVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNL--AEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
+ + F + Y L A V + +++ + Q+ +++LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLA--------------RTAG---TSFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 184
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 185 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 239
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 240 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 280
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 107 NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
+ E+ +L K+ HP + + + + L +++ + + D +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVL---LDRNLCPHLADFGLAEYRENLKEISLKNW 223
I Q+ A++YLH+LGIVHRD+KP N+L LD + ++DFGL++ + +S
Sbjct: 122 IF-QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS---- 176
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRA 283
GT Y+APE+L ++ +S+ D +S G+ LL G P+ D
Sbjct: 177 -------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 223
Query: 284 EAQAHTVLEMNY 295
+L+ Y
Sbjct: 224 AKLFEQILKAEY 235
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SCHA 159
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 160 PSS--RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 214
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 215 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 255
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 90 RKVAVKKPILSTSEELD---NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESR 146
R ++ +K + ++ E D N E+++L KL+HP + K + +Y E E
Sbjct: 166 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGG 224
Query: 147 NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRNLCPHL 203
L +K+ V + Q+ A+QYLH GI+HRD+KP NVLL + + +
Sbjct: 225 ELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 283
Query: 204 ADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIHSEKSD 260
DFG + + L E SL + + GT Y+APE+L ++ D
Sbjct: 284 TDFG---HSKILGETSL--------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVD 326
Query: 261 VYSFGISINELLTGVVPYTDLRAEA 285
+S G+ + L+G P+++ R +
Sbjct: 327 CWSLGVILFICLSGYPPFSEHRTQV 351
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+ P T L + G VV G+ K I S D F +E +++ L H
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
L + K E+ + L L Q+L + + +A++YL +
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT- 241
+HRD+ N L++ ++DFGL+ Y + + SS VG+
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRY------VLDDEYTSS------------VGSK 162
Query: 242 --LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQ 298
+ + PE+L S KSD+++FG+ + E+ + G +PY +T
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE--------------RFTNS 208
Query: 299 QLTAAVVSGGL---RPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ TA ++ GL RP LAS + +++ CW RP+F
Sbjct: 209 E-TAEHIAQGLRLYRPHLAS------EKVYTIMYSCWHEKADERPTF 248
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 104
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 105 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 153
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 154 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 210 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 251
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 252 RPGFAAVELRL 262
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 110
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 159
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 160 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 216 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 257
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 258 RPGFAAVELRL 268
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + D GLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDRGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 116
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 165
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 166 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 222 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 263
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 264 RPGFAAVELRL 274
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 107 NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
+ E+ +L K+ HP + + + + L +++ + + D +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVL---LDRNLCPHLADFGLAEYRENLKEISLKNW 223
I Q+ A++YLH+LGIVHRD+KP N+L LD + ++DFGL++ + +S
Sbjct: 122 IF-QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS---- 176
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRA 283
GT Y+APE+L ++ +S+ D +S G+ LL G P+ D
Sbjct: 177 -------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 223
Query: 284 EAQAHTVLEMNY 295
+L+ Y
Sbjct: 224 AKLFEQILKAEY 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 63 LPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
+ P T L + G VV G+ K I S D F +E +++ L H
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLG 182
L + K E+ + L L Q+L + + +A++YL +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT- 241
+HRD+ N L++ ++DFGL+ Y + + SS VG+
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRY------VLDDEYTSS------------VGSK 182
Query: 242 --LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQ 298
+ + PE+L S KSD+++FG+ + E+ + G +PY +T
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE--------------RFTNS 228
Query: 299 QLTAAVVSGGL---RPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
+ TA ++ GL RP LAS + +++ CW RP+F
Sbjct: 229 E-TAEHIAQGLRLYRPHLAS------EKVYTIMYSCWHEKADERPTF 268
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFY-----ESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + F + Y NL++ + +E + +L Q+ ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY---QMLCGIK 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+LH+ GI+HRD+KP+N+++ + + DFGLA R++G F
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA--------------RTAGT---SFMMT 183
Query: 237 NMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVV--PYTD 280
V T Y APE++ + E D++S G + E++ G V P TD
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 90 RKVAVK-----KPILSTSEELD---NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFE 141
+KVA+K K + ++ E D N E+++L KL+HP + K + +Y E
Sbjct: 42 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLE 100
Query: 142 FYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRN 198
E L +K+ V + Q+ A+QYLH GI+HRD+KP NVLL + +
Sbjct: 101 LMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 159
Query: 199 LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIH 255
+ DFG + + L E SL + + GT Y+APE+L +
Sbjct: 160 CLIKITDFG---HSKILGETSL--------------MRTLCGTPTYLAPEVLVSVGTAGY 202
Query: 256 SEKSDVYSFGISINELLTGVVPYTDLRAE 284
+ D +S G+ + L+G P+++ R +
Sbjct: 203 NRAVDCWSLGVILFICLSGYPPFSEHRTQ 231
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 28/230 (12%)
Query: 68 YTLLSPIARGAESVV------YEATLDGRKVAVKKPIL-STSEELDNF-HKELQLLCKLD 119
Y LL+ I +G E ++ Y+ T G V V++ L + S E+ F EL + +
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPT--GEYVTVRRINLEACSNEMVTFLQGELHVSKLFN 68
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQY 177
HP + + A N ++ + + A+ L + ++++ + I + KAL Y
Sbjct: 69 HPNIVPYRATFIAD-NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 178 LHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK-- 235
+H++G VHR VK +++L+ + L+ R NL I S G+ H
Sbjct: 128 IHHMGYVHRSVKASHILISVD-----GKVYLSGLRSNLSMI------SHGQRQRVVHDFP 176
Query: 236 KNMVGTLIYMAPEILKKEI--HSEKSDVYSFGISINELLTGVVPYTDLRA 283
K V L +++PE+L++ + + KSD+YS GI+ EL G VP+ D+ A
Sbjct: 177 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 106/266 (39%), Gaps = 21/266 (7%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAK 125
Y + + GA VV+ T G A K + + + KE+Q + L HP L
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 126 FVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVH 185
A + +EF L EK+ E S D+ + Q+ K L ++H VH
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 172
Query: 186 RDVKPANVLL--DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
D+KP N++ R+ L DFGL + + + + + GT
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-----------------TTGTAE 215
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAA 303
+ APE+ + + +D++S G+ LL+G+ P+ + V ++ +
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 275
Query: 304 VVSGGLRPILASLELGLPASILSLIQ 329
+S + + L L P + +++ Q
Sbjct: 276 GISEDGKDFIRKLLLADPNTRMTIHQ 301
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 126
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 175
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 176 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 232 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 273
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 274 RPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 126
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 175
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 176 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 232 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 273
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 274 RPGFAAVELRL 284
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 27/237 (11%)
Query: 66 SSYTLLSPIARG--AESVVYEATLDGRKVAVKKPILSTSE----ELDNFHKELQLLCKLD 119
+Y L I +G A+ + L GR+VAVK I+ ++ L +E++++ L+
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVK--IIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
HP + K E+ + + L V + Q+ A+QY H
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
IVHRD+K N+LLD ++ +ADFG S + T G
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGF-----------------SNEFTVGNKLDTFC 174
Query: 240 GTLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
G+ Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 160
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 161 PSS--RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 215
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 216 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 256
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 65 PSSYTLLSPIARGAESVVYEA--TLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLD 119
P Y LSP+ GA V A T G +VAVKK P S + +EL+LL +
Sbjct: 21 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMK 79
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNL-AEKLH--VEEWSPSVDQVLMIAAQLAKALQ 176
H + + + F + Y +L L+ V+ + D V + Q+ + L+
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
Y+H+ I+HRD+KP+N+ ++ + + D GLA R + G+
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDGGLA--------------RHTDDEMTGY--- 182
Query: 237 NMVGTLIYMAPEILKKEIHSEKS-DVYSFGISINELLTG--VVPYTD 280
V T Y APEI+ +H ++ D++S G + ELLTG + P TD
Sbjct: 183 --VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 121
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPYV 224
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 90 RKVAVK-----KPILSTSEELD---NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFE 141
+KVA+K K + ++ E D N E+++L KL+HP + K + +Y E
Sbjct: 35 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLE 93
Query: 142 FYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRN 198
E L +K+ V + Q+ A+QYLH GI+HRD+KP NVLL + +
Sbjct: 94 LMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 152
Query: 199 LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIH 255
+ DFG + + L E SL + + GT Y+APE+L +
Sbjct: 153 CLIKITDFG---HSKILGETSL--------------MRTLCGTPTYLAPEVLVSVGTAGY 195
Query: 256 SEKSDVYSFGISINELLTGVVPYTDLRAE 284
+ D +S G+ + L+G P+++ R +
Sbjct: 196 NRAVDCWSLGVILFICLSGYPPFSEHRTQ 224
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNL--AEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
+ + F + Y L A V + +++ + Q+ +++LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLA--------------RTAG---TSFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 161
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 162 PSS--RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 216
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 217 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 257
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 90 RKVAVK-----KPILSTSEELD---NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFE 141
+KVA+K K + ++ E D N E+++L KL+HP + K + +Y E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLE 94
Query: 142 FYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRN 198
E L +K+ V + Q+ A+QYLH GI+HRD+KP NVLL + +
Sbjct: 95 LMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 199 LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIH 255
+ DFG + + L E SL + + GT Y+APE+L +
Sbjct: 154 CLIKITDFG---HSKILGETSL--------------MRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 256 SEKSDVYSFGISINELLTGVVPYTDLRAE 284
+ D +S G+ + L+G P+++ R +
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 30/244 (12%)
Query: 92 VAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VAVK + E++D N +E+ L HP + +F P + E+ L E
Sbjct: 47 VAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL--ADFGL 208
++ S D+ QL + Y H + + HRD+K N LLD + P L FG
Sbjct: 105 RI-CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 209 AEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEI-LKKEIHSEKSDVYSFGIS 267
+ K+ +P K+ VGT Y+APE+ LKKE + +DV+S G++
Sbjct: 164 S-----------KSSVLHSQP------KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 268 INELLTGVVPYTDLRA----EAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPAS 323
+ +L G P+ D H +L + Y +S R +++ + + PA
Sbjct: 207 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH--ISPECRHLISRIFVADPAK 264
Query: 324 ILSL 327
+S+
Sbjct: 265 RISI 268
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 28/230 (12%)
Query: 68 YTLLSPIARGAESVV------YEATLDGRKVAVKKPIL-STSEELDNF-HKELQLLCKLD 119
Y LL+ I +G E ++ Y+ T G V V++ L + S E+ F EL + +
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPT--GEYVTVRRINLEACSNEMVTFLQGELHVSKLFN 84
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQY 177
HP + + A N ++ + + A+ L + ++++ + I + KAL Y
Sbjct: 85 HPNIVPYRATFIAD-NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 178 LHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK-- 235
+H++G VHR VK +++L+ + L+ R NL I S G+ H
Sbjct: 144 IHHMGYVHRSVKASHILISVD-----GKVYLSGLRSNLSMI------SHGQRQRVVHDFP 192
Query: 236 KNMVGTLIYMAPEILKKEI--HSEKSDVYSFGISINELLTGVVPYTDLRA 283
K V L +++PE+L++ + + KSD+YS GI+ EL G VP+ D+ A
Sbjct: 193 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 124
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 125 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 173
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 174 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 230 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 271
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 272 RPGFAAVELRL 282
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 76
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNL--AEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
+ + F + Y L A V + +++ + Q+ +++LH
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLA--------------RTAG---TSFMMTPYV 179
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 163
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 164 PSS--RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 218
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 219 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 259
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 38/208 (18%)
Query: 158 SPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKE 217
S + Q+L+ A Q+ + + YLH +HR++ NVLLD + + DFGLA+
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK------- 165
Query: 218 ISLKNWRSSGKPTGGFH---KKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTG 274
P G + +++ + + APE LK+ SDV+SFG+++ ELLT
Sbjct: 166 ---------AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 275 V-------VPYTDLRAEAQAH-TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILS 326
+ +L AQ TVL +LT + G P P +
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVL-------RLTELLERGERLPRPDK----CPCEVYH 265
Query: 327 LIQRCWDGNPHNRPSFSDIALELDLVLE 354
L++ CW+ RP+F ++ L V E
Sbjct: 266 LMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 48/284 (16%)
Query: 78 AESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYM 137
AE T D VAVK T +F +E +LL L H + KF +
Sbjct: 34 AECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 93
Query: 138 FFFEFYESRNLAEKLHVE--------EWSP-------SVDQVLMIAAQLAKALQYLHNLG 182
FE+ + +L + L + P + Q+L IA+Q+A + YL +
Sbjct: 94 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 153
Query: 183 IVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTL 242
VHRD+ N L+ NL + DFG++ +++ ++ G T + +
Sbjct: 154 FVHRDLATRNCLVGANLLVKIGDFGMS------RDVYSTDYYRVGGHT--------MLPI 199
Query: 243 IYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLT 301
+M PE + + +SDV+SFG+ + E+ T G P+ L + + E
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLE---- 255
Query: 302 AAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
RP + P + ++ CW P R + +I
Sbjct: 256 --------RPRVC------PKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ AA++A L +L + GI++RD+K NV+LD +ADFG+ +EN+
Sbjct: 443 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC--KENI------- 493
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLR 282
W G K GT Y+APEI+ + + + D ++FG+ + E+L G P+
Sbjct: 494 W-------DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546
Query: 283 AEAQAHTVLEMN 294
+ +++E N
Sbjct: 547 EDELFQSIMEHN 558
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 32/215 (14%)
Query: 73 PIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLL--CKLDHPGLAKFVAAH 130
P+ G+ S+ + A I+S E N KE+ L C+ HP + K
Sbjct: 18 PLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA-NTQKEITALKLCE-GHPNIVKLHEVF 75
Query: 131 AKPPNYMFFFEFYESRNLAEKL----HVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHR 186
+ E L E++ H E S I +L A+ ++H++G+VHR
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHDVGVVHR 130
Query: 187 DVKPANVLL---DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
D+KP N+L + NL + DFG A KP K TL
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARL----------------KPPDNQPLKTPCFTLH 174
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
Y APE+L + + E D++S G+ + +L+G VP+
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 90 RKVAVK-----KPILSTSEELD---NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFE 141
+KVA+K K + ++ E D N E+++L KL+HP + K + +Y E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLE 94
Query: 142 FYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRN 198
E L +K+ V + Q+ A+QYLH GI+HRD+KP NVLL + +
Sbjct: 95 LMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 199 LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIH 255
+ DFG + + L E SL + + GT Y+APE+L +
Sbjct: 154 CLIKITDFG---HSKILGETSL--------------MRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 256 SEKSDVYSFGISINELLTGVVPYTDLRAE 284
+ D +S G+ + L+G P+++ R +
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Query: 90 RKVAVK-----KPILSTSEELD---NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFE 141
+KVA+K K + ++ E D N E+++L KL+HP + K + +Y E
Sbjct: 36 KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLE 94
Query: 142 FYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL---DRN 198
E L +K+ V + Q+ A+QYLH GI+HRD+KP NVLL + +
Sbjct: 95 LMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 199 LCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEIL---KKEIH 255
+ DFG + + L E SL + + GT Y+APE+L +
Sbjct: 154 CLIKITDFG---HSKILGETSL--------------MRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 256 SEKSDVYSFGISINELLTGVVPYTDLRAE 284
+ D +S G+ + L+G P+++ R +
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 51/229 (22%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----------------VDQVLMI 167
+ FF+ E +++ V ++ P V V +
Sbjct: 77 RL---------RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSS 226
QL ++L Y+H+ GI HRD+KP N+LLD + L DFG S+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SA 170
Query: 227 GKPTGGFHKKNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ G + + + Y APE I ++ DV+S G + ELL G
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 81
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 187
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 188 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 24/193 (12%)
Query: 92 VAVKKPILSTSEELD-NFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
VAVK + E++D N +E+ L HP + +F P + E+ L E
Sbjct: 47 VAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHL--ADFGL 208
++ S D+ QL + Y H + + HRD+K N LLD + P L FG
Sbjct: 105 RI-CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 209 AEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEI-LKKEIHSEKSDVYSFGIS 267
+ K+ +P K+ VGT Y+APE+ LKKE + +DV+S G++
Sbjct: 164 S-----------KSSVLHSQP------KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 268 INELLTGVVPYTD 280
+ +L G P+ D
Sbjct: 207 LYVMLVGAYPFED 219
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 158
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 159 PSS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQD 213
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 214 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S P
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHAP 162
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHT 289
+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A T
Sbjct: 163 SS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQET 217
Query: 290 VLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
++ E V G LI R NP RP ++
Sbjct: 218 YKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 257
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 165 LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWR 224
L I Q+A+A+++LH+ G++HRD+KP+N+ + + DFGL + +E +
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE---EQTV 223
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
+ P H VGT +YM+PE + +S K D++S G+ + ELL
Sbjct: 224 LTPMPAYATH-XGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 74 IARGAESVVYEAT--LDGRKVAVKKPILSTSE-ELDNFHKELQLLCKLDHPGLAKFVAAH 130
+ RG VV+EA +D A+K+ L E + +E++ L KL+HPG+ ++ A
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 131 AKPP 134
+ P
Sbjct: 74 LETP 77
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 77
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 180
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 84
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 187
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 135/323 (41%), Gaps = 46/323 (14%)
Query: 70 LLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAA 129
LL I RG VY+ +LD R VAVK + + N K + + ++H +A+F+
Sbjct: 17 LLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFIVG 75
Query: 130 HAKPP-----NYMFFFEFYESRNLAE--KLHVEEWSPSVDQVLMIAAQLAKALQYLHNL- 181
+ Y+ E+Y + +L + LH +W S +A + + L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC----RLAHSVTRGLAYLHTEL 131
Query: 182 --------GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
I HRD+ NVL+ + ++DFGL+ ++ + R +
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS-----MRLTGNRLVRPGEEDNAAI 186
Query: 234 HKKNMVGTLIYMAPEILKKEIH-------SEKSDVYSFGISINELL---TGVVPYTDLRA 283
+ VGT+ YMAPE+L+ ++ ++ D+Y+ G+ E+ T + P +
Sbjct: 187 SE---VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243
Query: 284 EAQAHTVLEMNY-TEQQLTAAVVSGGLRPIL--ASLELGLPA-SILSLIQRCWDGNPHNR 339
A N+ T + + V RP A E L S+ I+ CWD + R
Sbjct: 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEAR 303
Query: 340 PSFS---DIALELDLVLEHRKSL 359
+ + EL ++ E KS+
Sbjct: 304 LTAQXAEERMAELMMIWERNKSV 326
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 84
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 187
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + + ++ELQ++ KLDH +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK----NRELQIMRKLDHCNIV 76
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 182
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 183 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 82
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 185
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 77
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 180
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 112
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 218
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 219 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 110
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 216
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 217 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 76
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 179
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 32/195 (16%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+++ ++ + Q+A+ +++L + +HRD+ N+LL N + DFGLA
Sbjct: 197 TMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA---------- 246
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R K K + L +MAPE + +I+S KSDV+S+G+ + E+ + G PY
Sbjct: 247 ----RDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ + + L G+R + + E P I ++ CW +P
Sbjct: 303 PGVQMDEDFCSRLR--------------EGMR--MRAPEYSTP-EIYQIMLDCWHRDPKE 345
Query: 339 RPSFSDIALELDLVL 353
RP F+++ +L +L
Sbjct: 346 RPRFAELVEKLGDLL 360
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 121
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPYV 224
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 114
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 220
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 221 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 89
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 195
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 196 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 16/130 (12%)
Query: 165 LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWR 224
+ AA++A L +L + GI++RD+K NV+LD +ADFG+ +EN+ W
Sbjct: 124 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC--KENI-------W- 173
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAE 284
G K GT Y+APEI+ + + + D ++FG+ + E+L G P+ +
Sbjct: 174 ------DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
Query: 285 AQAHTVLEMN 294
+++E N
Sbjct: 228 ELFQSIMEHN 237
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A LD R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMTPYV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 116
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 165
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 166 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 220 TKQETLAN-VSAVNY 233
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 155
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 261
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 262 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + + ++ELQ++ KLDH +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK----NRELQIMRKLDHCNIV 76
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 182
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 183 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 116
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 165
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 166 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 220 TKQETLAN-VSAVNY 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 104
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 210
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 211 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 42/249 (16%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 110
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL+ K +
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS------KALRAD 164
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTD 280
+ G + K + APE + S KSDV+SFG+ + E + G PY
Sbjct: 165 ENXYKAQTHGKWPVK-------WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 281 LRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRP 340
++ ++TA + G A G P + L+ CW + NRP
Sbjct: 218 MKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVENRP 259
Query: 341 SFSDIALEL 349
F+ + L L
Sbjct: 260 GFAAVELRL 268
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 78 AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPP 134
+E V+ E G+ AVK K L E + E+ +L K+ H + + P
Sbjct: 36 SEVVLAEEKATGKLFAVKCIPKKALKGKE--SSIENEIAVLRKIKHENIVALEDIYESPN 93
Query: 135 NYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL 194
+ + L +++ + + D +I Q+ A+ YLH +GIVHRD+KP N+L
Sbjct: 94 HLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR-QVLDAVYYLHRMGIVHRDLKPENLL 152
Query: 195 L---DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILK 251
D ++DFGL+ + GK G GT Y+APE+L
Sbjct: 153 YYSQDEESKIMISDFGLS--------------KMEGK---GDVMSTACGTPGYVAPEVLA 195
Query: 252 KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
++ +S+ D +S G+ LL G P+ D +L+ Y
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEY 239
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG A K++ G+P +
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA------KQL------VRGEPNVSY-- 182
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + Y APE I ++ DV+S G + ELL G
Sbjct: 183 ---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ +ADFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLCKLD 119
L P + L+ + G VY+ + ++A K + T +E + +E+ +L K
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS 78
Query: 120 H-PGLAKFVAAHAK--PP----NYMFFFEFYES-------RNLAEKLHVEEWSPSVDQVL 165
H +A + A K PP EF + +N EEW +
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW------IA 132
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRS 225
I ++ + L +LH ++HRD+K NVLL N L DFG +S + R+
Sbjct: 133 YICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG----------VSAQLDRT 182
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEIHSE-----KSDVYSFGISINELLTGVVPYTD 280
G+ + +GT +MAPE++ + + + KSD++S GI+ E+ G P D
Sbjct: 183 VGR------RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
Query: 281 L 281
+
Sbjct: 237 M 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W +G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLAG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 51/229 (22%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + + ++ELQ++ KLDH +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK----NRELQIMRKLDHCNIV 76
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS-----------------VDQVLMI 167
+ FF+ E ++ V ++ P+ V V +
Sbjct: 77 RL---------RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY 127
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSS 226
QL ++L Y+H+ GI HRD+KP N+LLD + L DFG S+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SA 170
Query: 227 GKPTGGFHKKNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ G + + + Y APE I ++ DV+S G + ELL G
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ +ADFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ +ADFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ +ADFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 56/304 (18%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAK 125
+ L I +G V+ G +VAVK I S+ EE F + E+ L H +
Sbjct: 5 TIVLQESIGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILG 62
Query: 126 FVAAHAKP----PNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH-- 179
F+AA K +++E +L + L+ ++ +V+ ++ +A A L +LH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHME 120
Query: 180 ------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
I HRD+K N+L+ +N +AD GLA + S T
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD------------SATDTIDI 168
Query: 234 HKKNMVGTLIYMAPEILKKEIHS------EKSDVYSFGISINEL-----LTGV-----VP 277
+ VGT YMAPE+L I+ +++D+Y+ G+ E+ + G+ +P
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 228
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPA--SILSLIQRCWDGN 335
Y DL + + + +++ V LRP + + A + +++ CW N
Sbjct: 229 YYDL---------VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 279
Query: 336 PHNR 339
R
Sbjct: 280 GAAR 283
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 469
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 470 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 518
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 519 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 575 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 616
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 617 RPGFAAVELRL 627
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 110
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 213
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 214 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 68 YTLLSPIARGAESVV--YEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAK 125
Y + + G S V E DG A+K+ + ++ + +E + +HP + +
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 126 FVA-----AHAKPPNYMF--FFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYL 178
VA AK ++ FF+ N E+L + + DQ+L + + + L+ +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFG-----LAEYRENLKEISLKNWRSSGKPTGGF 233
H G HRD+KP N+LL P L D G + + ++L++W +
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ------- 203
Query: 234 HKKNMVGTLIYMAPEILKKEIH---SEKSDVYSFGISINELLTGVVPY 278
T+ Y APE+ + H E++DV+S G + ++ G PY
Sbjct: 204 -----RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 56/304 (18%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAK 125
+ L I +G V+ G +VAVK I S+ EE F + E+ L H +
Sbjct: 10 TIVLQESIGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILG 67
Query: 126 FVAAHAKP----PNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH-- 179
F+AA K +++E +L + L+ ++ +V+ ++ +A A L +LH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHME 125
Query: 180 ------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
I HRD+K N+L+ +N +AD GLA + S T
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD------------SATDTIDI 173
Query: 234 HKKNMVGTLIYMAPEILKKEIHS------EKSDVYSFGISINEL-----LTGV-----VP 277
+ VGT YMAPE+L I+ +++D+Y+ G+ E+ + G+ +P
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 233
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPA--SILSLIQRCWDGN 335
Y DL + + + +++ V LRP + + A + +++ CW N
Sbjct: 234 YYDL---------VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 284
Query: 336 PHNR 339
R
Sbjct: 285 GAAR 288
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 25/236 (10%)
Query: 66 SSYTLLSPIARG--AESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLLCKLDH 120
+Y LL I +G A+ + L G++VAVK K L++S L +E+++ L+H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSS-LQKLFREVRIXKVLNH 72
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
P + K E+ + + L V + Q+ A+QY H
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
IVHRD+K N+LLD + +ADFG S + T G G
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGF-----------------SNEFTFGNKLDAFCG 174
Query: 241 TLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
Y APE+ + K+ + DV+S G+ + L++G +P+ + VL Y
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +ADFG W S
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------W-SVHA 163
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE ++ H EK D++S G+ E L G P+ A
Sbjct: 164 PSS--RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 218
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 219 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPXLREV 259
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 88
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 191
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 179
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 56/304 (18%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAK 125
+ L I +G V+ G +VAVK I S+ EE F + E+ L H +
Sbjct: 7 TIVLQESIGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILG 64
Query: 126 FVAAHAKP----PNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH-- 179
F+AA K +++E +L + L+ ++ +V+ ++ +A A L +LH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHME 122
Query: 180 ------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
I HRD+K N+L+ +N +AD GLA + S T
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD------------SATDTIDI 170
Query: 234 HKKNMVGTLIYMAPEILKKEIHS------EKSDVYSFGISINEL-----LTGV-----VP 277
+ VGT YMAPE+L I+ +++D+Y+ G+ E+ + G+ +P
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 230
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPA--SILSLIQRCWDGN 335
Y DL + + + +++ V LRP + + A + +++ CW N
Sbjct: 231 YYDL---------VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 281
Query: 336 PHNR 339
R
Sbjct: 282 GAAR 285
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYE----SRNLAEKLHVEEWSPSV 161
D E ++ +LD+P + + + + ++M E E ++ L + HV++
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD----- 468
Query: 162 DQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLK 221
++ + Q++ ++YL VHRD+ NVLL ++DFGL++
Sbjct: 469 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK----------- 517
Query: 222 NWRSSGKPTGGFHKKNMVGT--LIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
+ + ++K G + + APE + S KSDV+SFG+ + E + G PY
Sbjct: 518 ----ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ ++TA + G A G P + L+ CW + N
Sbjct: 574 RGMKG--------------SEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 615
Query: 339 RPSFSDIALEL 349
RP F+ + L L
Sbjct: 616 RPGFAAVELRL 626
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPG-LAKFVAAHAKPPNYMFFFEFYESRNLAEKL 152
+KK ++ ++++ E ++L LD P L + + F E+ +L
Sbjct: 52 LKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLM--Y 109
Query: 153 HVEEWSPSVD-QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEY 211
H+++ + Q + AA+++ L +LH GI++RD+K NV+LD +ADFG+
Sbjct: 110 HIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC-- 167
Query: 212 RENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINEL 271
+E++ + G + GT Y+APEI+ + + + D +++G+ + E+
Sbjct: 168 KEHMMD--------------GVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 213
Query: 272 LTGVVPYTDLRAEAQAHTVLEMNYT 296
L G P+ + +++E N +
Sbjct: 214 LAGQPPFDGEDEDELFQSIMEHNVS 238
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAKFV 127
TLL + +G V+ + G VAVK I S+ +E F + EL L H + F+
Sbjct: 11 TLLECVGKGRYGEVWRGSWQGENVAVK--IFSSRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 128 AAHA----KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLH-- 179
A+ ++E +L + L + ++D V L I +A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 180 ------NLGIVHRDVKPANVLLDRNLCPHLADFGLA-EYRENLKEISLKNWRSSGKPTGG 232
I HRD+K N+L+ +N +AD GLA + ++ ++ + N
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN---------- 174
Query: 233 FHKKNMVGTLIYMAPEILKKEIHSE------KSDVYSFGISINELLTGVVPYTDLR-AEA 285
VGT YMAPE+L + I + + D+++FG+ + E+ +V + +
Sbjct: 175 ---NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231
Query: 286 QAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLP--ASILSLIQRCWDGNPHNR 339
+ V+ + + + + V RP + + P S+ L++ CW NP R
Sbjct: 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 56/304 (18%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAK 125
+ L I +G V+ G +VAVK I S+ EE F + E+ L H +
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILG 61
Query: 126 FVAAHAKP----PNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH-- 179
F+AA K +++E +L + L+ ++ +V+ ++ +A A L +LH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHME 119
Query: 180 ------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
I HRD+K N+L+ +N +AD GLA + S T
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD------------SATDTIDI 167
Query: 234 HKKNMVGTLIYMAPEILKKEIHS------EKSDVYSFGISINEL-----LTGV-----VP 277
+ VGT YMAPE+L I+ +++D+Y+ G+ E+ + G+ +P
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPA-SILSLIQR-CWDGN 335
Y DL + + + +++ V LRP + + A +++ I R CW N
Sbjct: 228 YYDL---------VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 278
Query: 336 PHNR 339
R
Sbjct: 279 GAAR 282
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +A+FG W S
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG---------------W-SVHA 160
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 161 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 215
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 216 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 256
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 95
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 198
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 199 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 80
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 183
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 184 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
+LA AL Y H+ ++HRD+KP N+LL +A+FG W S
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG---------------W-SVHA 161
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
P+ + + GTL Y+ PE+++ +H EK D++S G+ E L G P+ A
Sbjct: 162 PSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF---EANTYQE 216
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
T ++ E V G LI R NP RP ++
Sbjct: 217 TYKRISRVEFTFPDFVTEGA----------------RDLISRLLKHNPSQRPMLREV 257
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 77
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 180
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 181 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFGLA K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 46/297 (15%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAKFV 127
TLL + +G V+ + G VAVK I S+ +E F + EL L H + F+
Sbjct: 11 TLLECVGKGRYGEVWRGSWQGENVAVK--IFSSRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 128 AA-----HAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLH- 179
A+ H+ ++ ++E +L + L + ++D V L I +A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLIT-HYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 180 -------NLGIVHRDVKPANVLLDRNLCPHLADFGLA-EYRENLKEISLKNWRSSGKPTG 231
I HRD+K N+L+ +N +AD GLA + ++ ++ + N
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN--------- 174
Query: 232 GFHKKNMVGTLIYMAPEILKKEIHSE------KSDVYSFGISINELLTGVVPYTDLR-AE 284
VGT YMAPE+L + I + + D+++FG+ + E+ +V + +
Sbjct: 175 ----NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230
Query: 285 AQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLP--ASILSLIQRCWDGNPHNR 339
+ V+ + + + + V RP + + P S+ L++ CW NP R
Sbjct: 231 PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 48/259 (18%)
Query: 55 SSQSIPLHLPPS---SYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK- 110
S +PL + + + L I +G V+ G +VAVK I S+ EE F +
Sbjct: 15 SGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREA 72
Query: 111 ELQLLCKLDHPGLAKFVAAHAKP----PNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM 166
E+ L H + F+AA K +++E +L + L+ ++ +V+ ++
Sbjct: 73 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIK 130
Query: 167 IAAQLAKALQYLH--------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
+A A L +LH I HRD+K N+L+ +N +AD GLA +
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD----- 185
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHS------EKSDVYSFGISINEL- 271
S T + VGT YMAPE+L I+ +++D+Y+ G+ E+
Sbjct: 186 -------SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
Query: 272 ----LTGV-----VPYTDL 281
+ G+ +PY DL
Sbjct: 239 RRCSIGGIHEDYQLPYYDL 257
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 88
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 191
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLXG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 76
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 179
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 89 GRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYES 145
GR A+K K ++ +E+ + E ++L HP L A F E+
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89
Query: 146 RNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLAD 205
L L E + ++ A++ AL+YLH+ +V+RD+K N++LD++ + D
Sbjct: 90 GELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 206 FGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFG 265
FGL +E + + G K GT Y+APE+L+ + D + G
Sbjct: 149 FGLC--KEGISD--------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 266 ISINELLTGVVPY 278
+ + E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 67 SYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
SYT I G+ VVY+A L G VA+KK + + N +ELQ++ KLDH +
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--VLQDKRFKN--RELQIMRKLDHCNIV 84
Query: 125 K-----FVAAHAKPPNYMFFFEFYESRNL---AEKLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + + K Y+ Y + A + + V V + QL ++L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
Y+H+ GI HRD+KP N+LLD + L DFG S+ + G
Sbjct: 145 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-----------------SAKQLVRGEPN 187
Query: 236 KNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ DV+S G + ELL G
Sbjct: 188 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 69 TLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAKFV 127
TLL + +G V+ + G VAVK I S+ +E F + EL L H + F+
Sbjct: 40 TLLECVGKGRYGEVWRGSWQGENVAVK--IFSSRDEKSWFRETELYNTVMLRHENILGFI 97
Query: 128 AAHA----KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQV--LMIAAQLAKALQYLH-- 179
A+ ++E +L + L + ++D V L I +A L +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIE 153
Query: 180 ------NLGIVHRDVKPANVLLDRNLCPHLADFGLA-EYRENLKEISLKNWRSSGKPTGG 232
I HRD+K N+L+ +N +AD GLA + ++ ++ + N
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN---------- 203
Query: 233 FHKKNMVGTLIYMAPEILKKEIHSE------KSDVYSFGISINELLTGVVPYTDLR-AEA 285
VGT YMAPE+L + I + + D+++FG+ + E+ +V + +
Sbjct: 204 ---NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 260
Query: 286 QAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLP--ASILSLIQRCWDGNPHNR 339
+ V+ + + + + V RP + + P S+ L++ CW NP R
Sbjct: 261 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 56/304 (18%)
Query: 67 SYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAK 125
+ L I +G V+ G +VAVK I S+ EE F + E+ L H +
Sbjct: 43 TIVLQESIGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFREAEIYQTVMLRHENILG 100
Query: 126 FVAAHAKP----PNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH-- 179
F+AA K +++E +L + L+ ++ +V+ ++ +A A L +LH
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHME 158
Query: 180 ------NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
I HRD+K N+L+ +N +AD GLA + S T
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD------------SATDTIDI 206
Query: 234 HKKNMVGTLIYMAPEILKKEIHS------EKSDVYSFGISINEL-----LTGV-----VP 277
+ VGT YMAPE+L I+ +++D+Y+ G+ E+ + G+ +P
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266
Query: 278 YTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPA--SILSLIQRCWDGN 335
Y DL + + + +++ V LRP + + A + +++ CW N
Sbjct: 267 YYDL---------VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 317
Query: 336 PHNR 339
R
Sbjct: 318 GAAR 321
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 47/205 (22%)
Query: 148 LAEKLHVEEW-----SPSVDQVLMIA--AQLAKALQYLHNLGIVHRDVKPANVLLDRNLC 200
+K +E+W +D+VL + Q+ K + Y+H+ ++HRD+KP+N+ L
Sbjct: 115 FCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ 174
Query: 201 PHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSD 260
+ DFGL SLKN GK T GTL YM+PE + + + ++ D
Sbjct: 175 VKIGDFGLV--------TSLKN---DGKRT------RSKGTLRYMSPEQISSQDYGKEVD 217
Query: 261 VYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGL 320
+Y+ G+ + ELL V + + + + G + I E
Sbjct: 218 LYALGLILAELL----------------HVCDTAFETSKFFTDLRDGIISDIFDKKE--- 258
Query: 321 PASILSLIQRCWDGNPHNRPSFSDI 345
+L+Q+ P +RP+ S+I
Sbjct: 259 ----KTLLQKLLSKKPEDRPNTSEI 279
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 89 GRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYES 145
GR A+K K ++ +E+ + E ++L HP L A F E+
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89
Query: 146 RNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLAD 205
L L E + ++ A++ AL+YLH+ +V+RD+K N++LD++ + D
Sbjct: 90 GELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 206 FGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFG 265
FGL +E + + G K GT Y+APE+L+ + D + G
Sbjct: 149 FGLC--KEGISD--------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 266 ISINELLTGVVPY 278
+ + E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 89 GRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYES 145
GR A+K K ++ +E+ + E ++L HP L A F E+
Sbjct: 33 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 92
Query: 146 RNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLAD 205
L L E + ++ A++ AL+YLH+ +V+RD+K N++LD++ + D
Sbjct: 93 GELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 151
Query: 206 FGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFG 265
FGL +E + + G K GT Y+APE+L+ + D + G
Sbjct: 152 FGLC--KEGISD--------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 195
Query: 266 ISINELLTGVVPY 278
+ + E++ G +P+
Sbjct: 196 VVMYEMMCGRLPF 208
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 142 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 195
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 196 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 189 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---------- 238
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G PY
Sbjct: 239 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ + + L+ G R + + + P +++ CW G P
Sbjct: 295 PGVKIDEEFCRRLKE--------------GTR--MRAPDYTTPEMYQTMLD-CWHGEPSQ 337
Query: 339 RPSFSDIALELDLVLE 354
RP+FS++ L +L+
Sbjct: 338 RPTFSELVEHLGNLLQ 353
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
++ +E+ +L ++ HP + + + + E L + L E+ S + ++
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEAT 117
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+L I H D+KP N+ LLDRN+ + DFGLA
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----------- 166
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 167 ------KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
Query: 281 LRAEAQAHTVLEMNY 295
+ E A+ V +NY
Sbjct: 221 TKQETLAN-VSAVNY 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 25/200 (12%)
Query: 84 EATLDGRKVA---VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFF 140
E T G K+A +K + EE+ N E+ ++ +LDH L + A + +
Sbjct: 109 EETATGLKLAAKIIKTRGMKDKEEVKN---EISVMNQLDHANLIQLYDAFESKNDIVLVM 165
Query: 141 EFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVL-LDRNL 199
E+ + L +++ E ++ + ++ Q+ + ++++H + I+H D+KP N+L ++R+
Sbjct: 166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA 225
Query: 200 CP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEK 258
+ DFGLA + ++ K F GT ++APE++ + S
Sbjct: 226 KQIKIIDFGLA-----------RRYKPREKLKVNF------GTPEFLAPEVVNYDFVSFP 268
Query: 259 SDVYSFGISINELLTGVVPY 278
+D++S G+ LL+G+ P+
Sbjct: 269 TDMWSVGVIAYMLLSGLSPF 288
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 94 VKKPILSTSEE---LDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
+KK LS+S + +E+ +L ++ HP + + + E L +
Sbjct: 38 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 97
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADF 206
L E+ S + D+ Q+ + YLH+ I H D+KP N+ LLD+N+ L DF
Sbjct: 98 FL-AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
G+A K G KN+ GT ++APEI+ E ++D++S G+
Sbjct: 157 GIAH-----------------KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 199
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNY 295
LL+G P+ + + +NY
Sbjct: 200 ITYILLSGASPFLGETKQETLTNISAVNY 228
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 221
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 222 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 133/320 (41%), Gaps = 47/320 (14%)
Query: 66 SSYTLLSPIARGAESVVYEATL--DGRKVAVKKPILSTSEELDN--FHKELQLLCKLDHP 121
Y + I G+ VV++ G+ VA+KK + S + + +E+++L +L HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
L + + FE+ + L E ++ + V + L+ I Q +A+ + H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHE---LDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+HRDVKP N+L+ ++ L DFG A R P+ + + V
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFA--------------RLLTGPSDYY--DDEV 163
Query: 240 GTLIYMAPEILKKEI-HSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH----TVLEMN 294
T Y +PE+L + + DV++ G ELL+GV + Q + T+ ++
Sbjct: 164 ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI 223
Query: 295 YTEQQL--TAAVVSGGLRP---ILASLELGLP---ASILSLIQRCWDGNPHNR------- 339
QQ+ T SG P + LEL P L L++ C +P R
Sbjct: 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
Query: 340 --PSFSDIALELDLVLEHRK 357
P F +I DL EH K
Sbjct: 284 HHPYFENIREIEDLAKEHDK 303
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 67 SYTLLSPIARGAESVVY--EATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLA 124
++ + + GA S V+ + L G+ A+K S + + E+ +L K+ H +
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIV 184
+ +Y + L +++ +E + ++ Q+ A++YLH GIV
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRI-LERGVYTEKDASLVIQQVLSAVKYLHENGIV 128
Query: 185 HRDVKPANVLL---DRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGT 241
HRD+KP N+L + N + DFGL++ +N G GT
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-----------------GI-MSTACGT 170
Query: 242 LIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
Y+APE+L ++ +S+ D +S G+ LL G P+ +
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 21/216 (9%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNF--HKELQLLCKLDHPGLAK 125
Y +L + GA VV+ ++T LD + E+ ++ +L HP L
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 126 FVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVH 185
A + EF L +++ E++ S +V+ Q + L+++H IVH
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172
Query: 186 RDVKPANVLLDRNLCP--HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
D+KP N++ + + DFGLA + N EI K T
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLAT-KLNPDEIV----------------KVTTATAE 215
Query: 244 YMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT 279
+ APEI+ +E +D+++ G+ LL+G+ P+
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 89 GRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYES 145
GR A+K K ++ +E+ + E ++L HP L A F E+
Sbjct: 35 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 94
Query: 146 RNL-----AEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLC 200
L E++ EE + A++ AL+YLH+ +V+RD+K N++LD++
Sbjct: 95 GELFFHLSRERVFTEE------RARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 148
Query: 201 PHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSD 260
+ DFGL +E + + G K GT Y+APE+L+ + D
Sbjct: 149 IKITDFGLC--KEGISD--------------GATMKXFCGTPEYLAPEVLEDNDYGRAVD 192
Query: 261 VYSFGISINELLTGVVPY 278
+ G+ + E++ G +P+
Sbjct: 193 WWGLGVVMYEMMCGRLPF 210
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 191 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---------- 240
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G PY
Sbjct: 241 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ + + L+ G R + + + P +++ CW G P
Sbjct: 297 PGVKIDEEFCRRLKE--------------GTR--MRAPDYTTPEMYQTMLD-CWHGEPSQ 339
Query: 339 RPSFSDIALELDLVLE 354
RP+FS++ L +L+
Sbjct: 340 RPTFSELVEHLGNLLQ 355
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 133 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWTLCG 186
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 187 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 196 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---------- 245
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G PY
Sbjct: 246 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ + + L+ G R + + + P +++ CW G P
Sbjct: 302 PGVKIDEEFCRRLKE--------------GTR--MRAPDYTTPEMYQTMLD-CWHGEPSQ 344
Query: 339 RPSFSDIALELDLVLE 354
RP+FS++ L +L+
Sbjct: 345 RPTFSELVEHLGNLLQ 360
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 193
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 194 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWTLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 193
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 194 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFGLA K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 221
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 222 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEIS 219
+++ ++ + Q+AK +++L + +HRD+ N+LL + DFGLA
Sbjct: 198 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---------- 247
Query: 220 LKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPY 278
R K K + L +MAPE + +++ +SDV+SFG+ + E+ + G PY
Sbjct: 248 ----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
Query: 279 TDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHN 338
++ + + L+ G R + + + P +++ CW G P
Sbjct: 304 PGVKIDEEFCRRLKE--------------GTR--MRAPDYTTPEMYQTMLD-CWHGEPSQ 346
Query: 339 RPSFSDIALELDLVLE 354
RP+FS++ L +L+
Sbjct: 347 RPTFSELVEHLGNLLQ 362
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 89 GRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYES 145
GR A+K K ++ +E+ + E ++L HP L A F E+
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89
Query: 146 RNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLAD 205
L L E + ++ A++ AL+YLH+ +V+RD+K N++LD++ + D
Sbjct: 90 GELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 206 FGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFG 265
FGL +E + + G K GT Y+APE+L+ + D + G
Sbjct: 149 FGLC--KEGISD--------------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 266 ISINELLTGVVPY 278
+ + E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 89 GRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYES 145
GR A+K K ++ +E+ + E ++L HP L A F E+
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89
Query: 146 RNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLAD 205
L L E + ++ A++ AL+YLH+ +V+RD+K N++LD++ + D
Sbjct: 90 GELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 206 FGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFG 265
FGL +E + + G K GT Y+APE+L+ + D + G
Sbjct: 149 FGLC--KEGISD--------------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 266 ISINELLTGVVPY 278
+ + E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D + DFG A K + + W G
Sbjct: 134 AAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA------KRVKGRTWXLCG 187
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 188 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 158 SPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPH-LADFGLAEYRENLK 216
S S +V L KAL+ +H GIVHRDVKP+N L +R L + L DFGLA+ + K
Sbjct: 113 SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172
Query: 217 EISLKNWRSSGKPTGGFHKKNMV------------GTLIYMAPEILKKEIHSEKS-DVYS 263
LK +S + K + GT + APE+L K + + D++S
Sbjct: 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWS 232
Query: 264 FGISINELLTGVVPY----TDLRAEAQAHTV 290
G+ LL+G P+ DL A AQ T+
Sbjct: 233 AGVIFLSLLSGRYPFYKASDDLTALAQIMTI 263
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 89 GRKVAVK---KPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYES 145
GR A+K K ++ +E+ + E ++L HP L A F E+
Sbjct: 30 GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89
Query: 146 RNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLAD 205
L L E + ++ A++ AL+YLH+ +V+RD+K N++LD++ + D
Sbjct: 90 GELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 206 FGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFG 265
FGL +E + + G K GT Y+APE+L+ + D + G
Sbjct: 149 FGLC--KEGISD--------------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 266 ISINELLTGVVPY 278
+ + E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 36/264 (13%)
Query: 61 LHLPPSSYTLLSPIARGA--ESVVYEATLDGRKVAVK---KPILSTSEELDNFHKELQLL 115
+ L + +L I RGA E V + G+ A+K K + E+ F +E +L
Sbjct: 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL 115
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFF-FEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKA 174
D + + A + NY++ E+Y +L L + A++ A
Sbjct: 116 VNGDRRWITQLHFAF-QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA 174
Query: 175 LQYLHNLGIVHRDVKPANVLLDRNLCPH--LADFGLAEYRENLKEISLKNWRSSGKPTGG 232
+ +H LG VHRD+KP N+LLDR C H LADFG S R+ G
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDR--CGHIRLADFG-----------SCLKLRADGT---- 217
Query: 233 FHKKNMVGTLIYMAPEILK-------KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEA 285
VGT Y++PEIL+ + + D ++ G+ E+ G P+ A++
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY---ADS 274
Query: 286 QAHTVLEMNYTEQQLTAAVVSGGL 309
A T ++ + ++ L+ +V G+
Sbjct: 275 TAETYGKIVHYKEHLSLPLVDEGV 298
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 18/229 (7%)
Query: 66 SSYTLLSPIARGAESVVYEATLD--GRKVAVKK--PILSTSEELDNFHKELQLLCKLDHP 121
S + L S + GA VV AT G VA+KK P L +E+++L H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHE 69
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAE-KLH--VEEWSPSVDQVLMIAAQLAKALQYL 178
+ +P ++ F E Y + L + LH + S D + Q +A++ L
Sbjct: 70 NIITIFNIQ-RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H ++HRD+KP+N+L++ N + DFGLA + E + N +G+ +G
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI---IDESAADNSEPTGQQSG---MTEX 182
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELL--TGVVPYTDLRAE 284
V T Y APE+ L +S DV+S G + EL + P D R +
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 18/229 (7%)
Query: 66 SSYTLLSPIARGAESVVYEATLD--GRKVAVKK--PILSTSEELDNFHKELQLLCKLDHP 121
S + L S + GA VV AT G VA+KK P L +E+++L H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHE 69
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAE-KLH--VEEWSPSVDQVLMIAAQLAKALQYL 178
+ +P ++ F E Y + L + LH + S D + Q +A++ L
Sbjct: 70 NIITIFNIQ-RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H ++HRD+KP+N+L++ N + DFGLA + E + N +G+ +G
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI---IDESAADNSEPTGQQSGMV---EF 182
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELL--TGVVPYTDLRAE 284
V T Y APE+ L +S DV+S G + EL + P D R +
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 122/304 (40%), Gaps = 53/304 (17%)
Query: 64 PPSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILS---TSEELDNFHKELQLLCKL 118
P ++ L I G+ VY A + VA+KK S ++E+ + KE++ L KL
Sbjct: 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 72
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQ-- 176
HP ++ + + E+ L + E Q + IAA ALQ
Sbjct: 73 RHPNTIQYRGCYLREHTAWLVMEY----CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 177 -YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
YLH+ ++HRDVK N+LL L DFG A S P F
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA---------------SIMAPANXF-- 171
Query: 236 KNMVGTLIYMAPEI---LKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLE 292
VGT +MAPE+ + + + K DV+S GI+ EL P ++ A + + +
Sbjct: 172 ---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-- 226
Query: 293 MNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLV 352
Q + A+ SG + + C P +RP+ S++ L+ V
Sbjct: 227 ----AQNESPALQSGHWSEYFR-----------NFVDSCLQKIPQDRPT-SEVLLKHRFV 270
Query: 353 LEHR 356
L R
Sbjct: 271 LRER 274
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 92/234 (39%), Gaps = 25/234 (10%)
Query: 55 SSQSIPLHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDN-----FH 109
+S+ + L + +L I RGA V L IL+ E L F
Sbjct: 63 TSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFR 122
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAA 169
+E +L D + A N ++Y +L L E + A
Sbjct: 123 EERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA 182
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
++ A+ +H L VHRD+KP N+L+D N LADFG LK +
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC-----LKLME---------- 227
Query: 230 TGGFHKKNMVGTLIYMAPEILK-----KEIHSEKSDVYSFGISINELLTGVVPY 278
G VGT Y++PEIL+ K + + D +S G+ + E+L G P+
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 18/229 (7%)
Query: 66 SSYTLLSPIARGAESVVYEATLD--GRKVAVKK--PILSTSEELDNFHKELQLLCKLDHP 121
S + L S + GA VV AT G VA+KK P L +E+++L H
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKHE 69
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAE-KLH--VEEWSPSVDQVLMIAAQLAKALQYL 178
+ +P ++ F E Y + L + LH + S D + Q +A++ L
Sbjct: 70 NIITIFNIQ-RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H ++HRD+KP+N+L++ N + DFGLA + E + N +G+ +G
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI---IDESAADNSEPTGQQSG---MTEY 182
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELL--TGVVPYTDLRAE 284
V T Y APE+ L +S DV+S G + EL + P D R +
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 94 VKKPILSTSEE---LDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAE 150
+KK LS+S + +E+ +L ++ HP + + + E L +
Sbjct: 45 IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFD 104
Query: 151 KLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADF 206
L E+ S + D+ Q+ + YLH+ I H D+KP N+ LLD+N+ L DF
Sbjct: 105 FL-AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 207 GLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGI 266
G+A K G KN+ GT ++APEI+ E ++D++S G+
Sbjct: 164 GIAH-----------------KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 267 SINELLTGVVPYTDLRAEAQAHTVLEMNY 295
LL+G P+ + + +NY
Sbjct: 207 ITYILLSGASPFLGETKQETLTNISAVNY 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F + V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMEPEV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 47/301 (15%)
Query: 64 PPSSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILS---TSEELDNFHKELQLLCKL 118
P ++ L I G+ VY A + VA+KK S ++E+ + KE++ L KL
Sbjct: 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 111
Query: 119 DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYL 178
HP ++ + + E Y + ++ L V + ++ + + L YL
Sbjct: 112 RHPNTIQYRGCYLREHTAWLVME-YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRDVK N+LL L DFG A S P F
Sbjct: 171 HSHNMIHRDVKAGNILLSEPGLVKLGDFGSA---------------SIMAPANXF----- 210
Query: 239 VGTLIYMAPEI---LKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNY 295
VGT +MAPE+ + + + K DV+S GI+ EL P ++ A + + +
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----- 265
Query: 296 TEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIALELDLVLEH 355
Q + A+ SG + + C P +RP+ S++ L+ VL
Sbjct: 266 -AQNESPALQSGHWSEYFR-----------NFVDSCLQKIPQDRPT-SEVLLKHRFVLRE 312
Query: 356 R 356
R
Sbjct: 313 R 313
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 22/117 (18%)
Query: 167 IAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRS 225
IA + KAL++LH+ L ++HRDVKP+NVL++ + DFG++ Y L + K+ +
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY---LVDDVAKDIDA 170
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEI----HSEKSDVYSFGISINELLTGVVPY 278
KP YMAPE + E+ +S KSD++S GI++ EL PY
Sbjct: 171 GCKP--------------YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I ++ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 202 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 25/193 (12%)
Query: 110 KELQLLCKLD-HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA 168
KE+ +L K+ HP + + + + F+ + L + L E+ + S + I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
L + + LH L IVHRD+KP N+LLD ++ L DFG S +
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF-----------------SCQ 173
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEI------HSEKSDVYSFGISINELLTGVVPYTDLR 282
G +++ GT Y+APEI++ + + ++ D++S G+ + LL G P+ +
Sbjct: 174 LDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 283 AEAQAHTVLEMNY 295
++ NY
Sbjct: 234 QMLMLRMIMSGNY 246
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ + AA++ L+ LH IV+RD+KP N+LLD + ++D GLA + + I
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---- 342
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLR 282
K VGT+ YMAPE++K E ++ D ++ G + E++ G P+ +
Sbjct: 343 -------------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
Query: 283 AEAQAHTV 290
+ + V
Sbjct: 390 KKIKREEV 397
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + W G
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGATWTLCG 221
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 222 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+++D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 88
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 149 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPYV 191
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 75/297 (25%)
Query: 74 IARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDH----------- 120
I G V++A +DG+ +K+ + + +E++ L KLDH
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCWD 74
Query: 121 -----PGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEW-----SPSVDQVLMIA-- 168
P + ++ +K EF +K +E+W +D+VL +
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEF------CDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+ K + Y+H+ +++RD+KP+N+ L + DFGL SLKN GK
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV--------TSLKN---DGK 177
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
+ GTL YM+PE + + + ++ D+Y+ G+ + ELL
Sbjct: 178 ------RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---------------- 215
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
V + + + + G + I E +L+Q+ P +RP+ S+I
Sbjct: 216 HVCDTAFETSKFFTDLRDGIISDIFDKKE-------KTLLQKLLSKKPEDRPNTSEI 265
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 110 KELQLLCKLD-HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA 168
KE+ +L K+ HP + + + + F+ + L + L E+ + S + I
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 117
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
L + + LH L IVHRD+KP N+LLD ++ L DFG S +
Sbjct: 118 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF-----------------SCQ 160
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEI------HSEKSDVYSFGISINELLTGVVPYTDLR 282
G + + GT Y+APEI++ + + ++ D++S G+ + LL G P+ +
Sbjct: 161 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
Query: 283 AEAQAHTVLEMNY 295
++ NY
Sbjct: 221 QMLMLRMIMSGNY 233
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ + AA++ L+ LH IV+RD+KP N+LLD + ++D GLA + + I
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---- 342
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLR 282
K VGT+ YMAPE++K E ++ D ++ G + E++ G P+ +
Sbjct: 343 -------------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
Query: 283 AEAQAHTV 290
+ + V
Sbjct: 390 KKIKREEV 397
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 22/117 (18%)
Query: 167 IAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRS 225
IA + KAL++LH+ L ++HRDVKP+NVL++ + DFG++ Y L + K +
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY---LVDSVAKTIDA 214
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEI----HSEKSDVYSFGISINELLTGVVPY 278
KP YMAPE + E+ +S KSD++S GI++ EL PY
Sbjct: 215 GCKP--------------YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 257
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 60/244 (24%)
Query: 61 LHLPPSSYTLLSPIARGA----ESVVYEATLDGRKVAVKKPILSTSEELDN-----FHKE 111
L + Y ++ I RGA + V +++T RKV K +LS E + F +E
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMK-LLSKFEMIKRSDSAFFWEE 124
Query: 112 LQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA--- 168
++ + P + + F+ F + R L V E+ P D V +++
Sbjct: 125 RDIMAFANSPWVVQL------------FYAFQDDRYL---YMVMEYMPGGDLVNLMSNYD 169
Query: 169 ----------AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
A++ AL +H++G +HRDVKP N+LLD++ LADFG
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC--------- 220
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE----IHSEKSDVYSFGISINELLTG 274
G VGT Y++PE+LK + + + D +S G+ + E+L G
Sbjct: 221 ------MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Query: 275 VVPY 278
P+
Sbjct: 275 DTPF 278
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 33/183 (18%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLG 168
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQ 286
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SE 227
Query: 287 AHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++LE Q P + +++ + ++++CW + +RP F ++
Sbjct: 228 ISSILEKGERLPQ-----------PPICTID------VYMIMRKCWMIDADSRPKFRELI 270
Query: 347 LEL 349
+E
Sbjct: 271 IEF 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 22/194 (11%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+ +E+ +L ++ HP + + + E L + L E+ S + D+
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEAT 132
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNLCP---HLADFGLAEYRENLKEISLK 221
Q+ + YLH+ I H D+KP N+ LLD+N+ L DFG+A
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH----------- 181
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDL 281
K G KN+ GT ++APEI+ E ++D++S G+ LL+G P+
Sbjct: 182 ------KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 235
Query: 282 RAEAQAHTVLEMNY 295
+ + +NY
Sbjct: 236 TKQETLTNISAVNY 249
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 60/244 (24%)
Query: 61 LHLPPSSYTLLSPIARGA----ESVVYEATLDGRKVAVKKPILSTSEELDN-----FHKE 111
L + Y ++ I RGA + V +++T RKV K +LS E + F +E
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMK-LLSKFEMIKRSDSAFFWEE 119
Query: 112 LQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA--- 168
++ + P + + F+ F + R L V E+ P D V +++
Sbjct: 120 RDIMAFANSPWVVQL------------FYAFQDDRYL---YMVMEYMPGGDLVNLMSNYD 164
Query: 169 ----------AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
A++ AL +H++G +HRDVKP N+LLD++ LADFG
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC--------- 215
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE----IHSEKSDVYSFGISINELLTG 274
G VGT Y++PE+LK + + + D +S G+ + E+L G
Sbjct: 216 ------MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
Query: 275 VVPY 278
P+
Sbjct: 270 DTPF 273
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 83
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F + V
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAG---TSFMMEPEV 186
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 187 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 60/244 (24%)
Query: 61 LHLPPSSYTLLSPIARGA----ESVVYEATLDGRKVAVKKPILSTSEELDN-----FHKE 111
L + Y ++ I RGA + V +++T RKV K +LS E + F +E
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMK-LLSKFEMIKRSDSAFFWEE 124
Query: 112 LQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA--- 168
++ + P + + F+ F + R L V E+ P D V +++
Sbjct: 125 RDIMAFANSPWVVQL------------FYAFQDDRYL---YMVMEYMPGGDLVNLMSNYD 169
Query: 169 ----------AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEI 218
A++ AL +H++G +HRDVKP N+LLD++ LADFG
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC--------- 220
Query: 219 SLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE----IHSEKSDVYSFGISINELLTG 274
G VGT Y++PE+LK + + + D +S G+ + E+L G
Sbjct: 221 ------MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
Query: 275 VVPY 278
P+
Sbjct: 275 DTPF 278
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 110 KELQLLCKLD-HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA 168
KE+ +L K+ HP + + + + F+ + L + L E+ + S + I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
L + + LH L IVHRD+KP N+LLD ++ L DFG S +
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF-----------------SCQ 173
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEI------HSEKSDVYSFGISINELLTGVVPYTDLR 282
G + + GT Y+APEI++ + + ++ D++S G+ + LL G P+ +
Sbjct: 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 283 AEAQAHTVLEMNY 295
++ NY
Sbjct: 234 QMLMLRMIMSGNY 246
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 68 YTLLSPIARGAESVV---YEATLDGRKVAVKK---PILSTSEELDNFHKELQLLCKLDHP 121
Y L PI GA+ +V Y+A L+ R VA+KK P + + ++EL L+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHK 77
Query: 122 GLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLM--IAAQLAKALQYLH 179
+ + + F + Y L + + +D M + Q+ +++LH
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ GI+HRD+KP+N+++ + + DFGLA R++G F V
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------------RTAGT---SFMMTPYV 180
Query: 240 GTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
T Y APE++ + E D++S G + E++
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 67 SYTLLSPIARGAESVVYEATLD-GRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGL 123
Y L I G VVY+A + G A+KK L +E +E+ +L +L H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 124 AKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
K + FE + ++L + L V E QL + Y H+ +
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
+HRD+KP N+L++R +ADFGLA R+ G P + + V TL
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLA--------------RAFGIPVRKYTHE--VVTLW 165
Query: 244 YMAPEILK-KEIHSEKSDVYSFGISINELLTG 274
Y AP++L + +S D++S G E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 67 SYTLLSPIARGAESVVYEATLD-GRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGL 123
Y L I G VVY+A + G A+KK L +E +E+ +L +L H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 124 AKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
K + FE + ++L + L V E QL + Y H+ +
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
+HRD+KP N+L++R +ADFGLA R+ G P + + V TL
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLA--------------RAFGIPVRKYTHE--VVTLW 165
Query: 244 YMAPEILK-KEIHSEKSDVYSFGISINELLTG 274
Y AP++L + +S D++S G E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 134 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 179
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 180 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 238
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++++CW + +RP F ++ +
Sbjct: 239 SSILEKGERLPQ-----------PPICTID------VYMIMRKCWMIDADSRPKFRELII 281
Query: 348 EL 349
E
Sbjct: 282 EF 283
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 172
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 231
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++++CW + +RP F ++ +
Sbjct: 232 SSILEKGERLPQ-----------PPICTID------VYMIMRKCWMIDADSRPKFRELII 274
Query: 348 EL 349
E
Sbjct: 275 EF 276
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 19/227 (8%)
Query: 65 PSSYTLLSPIARGAESVVYEATLDG--RKVAVKKPILSTSEELDNFHKELQLLCKLDHPG 122
P +Y + I RG+ VY A + VA+KK + E+L + + L+ + L+
Sbjct: 27 PDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKK-VNRMFEDLIDCKRILREITILNRLK 85
Query: 123 LAKFVAAH--AKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ H P + + F E Y +A+ KL + V I L +
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEK 145
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN--WRSSGKPTGGFH 234
++H GI+HRD+KPAN LL+++ + DFGLA + K+I + N G H
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 235 KKNM-------VGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLT 273
KN+ V T Y APE IL +E ++ D++S G ELL
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
+KK ++ +E+ + E ++L HP L + F E+ L L
Sbjct: 181 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 240
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYR 212
E S D+ A++ AL YLH+ +V+RD+K N++LD++ + DFGL +
Sbjct: 241 RER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--K 297
Query: 213 ENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
E +K+ G K GT Y+APE+L+ + D + G+ + E++
Sbjct: 298 EGIKD--------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
Query: 273 TGVVPY 278
G +P+
Sbjct: 344 CGRLPF 349
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 53/186 (28%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLD-RNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
Q+ A+Q+ H+ G+VHRD+K N+L+D R C L DFG +
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD------------- 192
Query: 228 KPTGGFHKKNMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQ 286
+P F GT +Y PE I + + H+ + V+S GI + +++ G +P+
Sbjct: 193 EPYTDFD-----GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE------- 240
Query: 287 AHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASI----LSLIQRCWDGNPHNRPSF 342
+Q++ A EL PA + +LI+RC P +RPS
Sbjct: 241 ---------RDQEILEA-------------ELHFPAHVSPDCCALIRRCLAPKPSSRPSL 278
Query: 343 SDIALE 348
+I L+
Sbjct: 279 EEILLD 284
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 48/256 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL-----HVEEWSPS 160
+ F E L +L HP + + K F + +L E L H + S
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 161 VDQVLM----------IAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
D+ + + AQ+A ++YL + +VH+D+ NVL+ L ++D GL
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL-- 174
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+E+ ++ K G N + + +MAPE + S SD++S+G+ + E
Sbjct: 175 ----FREVYAADYY---KLLG-----NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWE 222
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+ + G+ PY Y+ Q + + + + P PA + +L+
Sbjct: 223 VFSYGLQPYC--------------GYSNQDVVEMIRNRQVLPCPDD----CPAWVYALMI 264
Query: 330 RCWDGNPHNRPSFSDI 345
CW+ P RP F DI
Sbjct: 265 ECWNEFPSRRPRFKDI 280
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 67 SYTLLSPIARGAESVVYEATLD-GRKVAVKKPILSTSEE--LDNFHKELQLLCKLDHPGL 123
Y L I G VVY+A + G A+KK L +E +E+ +L +L H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 124 AKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
K + FE + ++L + L V E QL + Y H+ +
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
+HRD+KP N+L++R +ADFGLA R+ G P + + + TL
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLA--------------RAFGIPVRKYTHE--IVTLW 165
Query: 244 YMAPEILK-KEIHSEKSDVYSFGISINELLTG 274
Y AP++L + +S D++S G E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+ +E+ +L ++ H + + + + E L + L +E S S ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEAT 118
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNL-CPH--LADFGLAEYRENLKEISLK 221
Q+ + YLH I H D+KP N+ LLD+N+ PH L DFGLA E+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED------- 171
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 172 ----------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 281 LRAEAQAH-TVLEMNYTEQ 298
+ E A+ T + ++ E+
Sbjct: 222 TKQETLANITAVSYDFDEE 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 65 PSSYTLLSPIARGAESVVYEATLDG--RKVAVKKPILSTSEELD--NFHKELQLLCKLDH 120
P +Y + I RG+ VY A + VA+KK + +D +E+ +L +L
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 84
Query: 121 PGLAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQ 176
+ + P + + F E Y +A+ KL + + + I L
Sbjct: 85 DYIIRLYDL-IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 177 YLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
++H GI+HRD+KPAN LL+++ + DFGLA + K+ ++ N + G H K
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP-HNK 202
Query: 237 NM-------VGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLT 273
N+ V T Y APE IL +E +++ D++S G ELL
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 89 GRKVAVKKPILSTSEELDN--FHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESR 146
GR VA+KK + S +++ +E++LL +L H L + K + FEF +
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 147 NLAEKLHVEEWSPSVD-QVLM-IAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLA 204
L + +E + +D QV+ Q+ + + H+ I+HRD+KP N+L+ ++ L
Sbjct: 110 ILDD---LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLC 166
Query: 205 DFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKS-DVYS 263
DFG A R+ P G + V T Y APE+L ++ K+ DV++
Sbjct: 167 DFGFA--------------RTLAAP--GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWA 210
Query: 264 FGISINELLTG 274
G + E+ G
Sbjct: 211 IGCLVTEMFMG 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
+KK ++ +E+ + E ++L HP L + F E+ L L
Sbjct: 184 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 243
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYR 212
E S D+ A++ AL YLH+ +V+RD+K N++LD++ + DFGL +
Sbjct: 244 RER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--K 300
Query: 213 ENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
E +K+ G K GT Y+APE+L+ + D + G+ + E++
Sbjct: 301 EGIKD--------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 273 TGVVPY 278
G +P+
Sbjct: 347 CGRLPF 352
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 120/300 (40%), Gaps = 54/300 (18%)
Query: 70 LLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAKFVA 128
L+ + +G V+ G VAVK I S+ +E F + E+ L H + F+A
Sbjct: 12 LVECVGKGRYGEVWRGLWHGESVAVK--IFSSRDEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 129 AHAKPPN----YMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH----- 179
+ N ++E +L + L + P + L +A A L +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL--ALRLAVSAACGLAHLHVEIFG 127
Query: 180 ---NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
I HRD K NVL+ NL +AD GLA S G
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM------------HSQGSDYLDIGNN 175
Query: 237 NMVGTLIYMAPEILKKEIHSE------KSDVYSFGISINE-----LLTGVV-----PYTD 280
VGT YMAPE+L ++I ++ +D+++FG+ + E ++ G+V P+ D
Sbjct: 176 PRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYD 235
Query: 281 LRAEAQAHTVLEMNYTEQQLTAAVVSG-GLRPILASLELGLPASILSLIQRCWDGNPHNR 339
+ + ++ Q T + + P+L+ L +++ CW NP R
Sbjct: 236 VVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLA--------QMMRECWYPNPSAR 287
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P Y+AP I+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPE-------------YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+ +E+ +L ++ H + + + + E L + L +E S S ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEAT 118
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNL-CPH--LADFGLAEYRENLKEISLK 221
Q+ + YLH I H D+KP N+ LLD+N+ PH L DFGLA E+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED------- 171
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 172 ----------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 281 LRAEAQAH-TVLEMNYTEQ 298
+ E A+ T + ++ E+
Sbjct: 222 TKQETLANITAVSYDFDEE 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 34/194 (17%)
Query: 99 LSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWS 158
+S + D+F ELQ++ + + + NY + YE L +E+
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYC---LTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 159 PSVDQ----------VLMIAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFG 207
+D+ + I + + Y+HN I HRDVKP+N+L+D+N L+DFG
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG 197
Query: 208 LAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKE--IHSEKSDVYSFG 265
+EY + K +K R GT +M PE E + K D++S G
Sbjct: 198 ESEYMVDKK---IKGSR---------------GTYEFMPPEFFSNESSYNGAKVDIWSLG 239
Query: 266 ISINELLTGVVPYT 279
I + + VVP++
Sbjct: 240 ICLYVMFYNVVPFS 253
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 110 KELQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA 168
+E+++L + HP + + + E L +K+ +++ S + +
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF-SEREASFVL 127
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVL-LDRN---LCPHLADFGLAEYRENLKEISLKNWR 224
+ K ++YLH+ G+VHRD+KP+N+L +D + C + DFG A K++ +N
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFA------KQLRAEN-- 179
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
G + N V APE+LK++ + E D++S GI + +L G P+ +
Sbjct: 180 --GLLMTPCYTANFV------APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 48/256 (18%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKL-----HVEEWSPS 160
+ F E L +L HP + + K F + +L E L H + S
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 161 VDQVLM----------IAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE 210
D+ + + AQ+A ++YL + +VH+D+ NVL+ L ++D GL
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL-- 191
Query: 211 YRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINE 270
+E+ ++ K G N + + +MAPE + S SD++S+G+ + E
Sbjct: 192 ----FREVYAADYY---KLLG-----NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWE 239
Query: 271 LLT-GVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQ 329
+ + G+ PY Y+ Q + + + + P PA + +L+
Sbjct: 240 VFSYGLQPYC--------------GYSNQDVVEMIRNRQVLPCPDD----CPAWVYALMI 281
Query: 330 RCWDGNPHNRPSFSDI 345
CW+ P RP F DI
Sbjct: 282 ECWNEFPSRRPRFKDI 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
AAQ+ +YLH+L +++RD+KP N+L+D+ + DFG A K + + W G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
P +APEI+ + +++ D ++ G+ I E+ G P+
Sbjct: 201 TPEA-------------LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 110 KELQLLCKL-DHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIA 168
+E+++L + HP + + + E L +K+ +++ S + +
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF-SEREASFVL 127
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVL-LDRN---LCPHLADFGLAEYRENLKEISLKNWR 224
+ K ++YLH+ G+VHRD+KP+N+L +D + C + DFG A K++ +N
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFA------KQLRAEN-- 179
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
G + N V APE+LK++ + E D++S GI + +L G P+ +
Sbjct: 180 --GLLMTPCYTANFV------APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 117 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLG 162
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQ 286
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SE 221
Query: 287 AHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
++LE Q P + +++ + ++ +CW + +RP F ++
Sbjct: 222 ISSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELI 264
Query: 347 LEL 349
+E
Sbjct: 265 IEF 267
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+ +E+ +L ++ H + + + + E L + L +E S S ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEAT 118
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNL-CPH--LADFGLAEYRENLKEISLK 221
Q+ + YLH I H D+KP N+ LLD+N+ PH L DFGLA E+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED------- 171
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 172 ----------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 281 LRAEAQAH-TVLEMNYTEQQL--TAAVVSGGLRPILA 314
+ E A+ T + ++ E+ T+ + +R +L
Sbjct: 222 TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 176
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 235
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 236 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 278
Query: 348 EL 349
E
Sbjct: 279 EF 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+ +E+ +L ++ H + + + + E L + L +E S S ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEAT 118
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNL-CPH--LADFGLAEYRENLKEISLK 221
Q+ + YLH I H D+KP N+ LLD+N+ PH L DFGLA E+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED------- 171
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 172 ----------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 281 LRAEAQAH-TVLEMNYTEQ 298
+ E A+ T + ++ E+
Sbjct: 222 TKQETLANITSVSYDFDEE 240
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 171
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 230
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 231 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 273
Query: 348 EL 349
E
Sbjct: 274 EF 275
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 172
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 231
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 232 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 274
Query: 348 EL 349
E
Sbjct: 275 EF 276
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 171
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 230
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 231 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 273
Query: 348 EL 349
E
Sbjct: 274 EF 275
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 176
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 235
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 236 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 278
Query: 348 EL 349
E
Sbjct: 279 EF 280
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 169
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 228
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 229 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 271
Query: 348 EL 349
E
Sbjct: 272 EF 273
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 176
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 235
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 236 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 278
Query: 348 EL 349
E
Sbjct: 279 EF 280
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 169
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 228
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 229 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 271
Query: 348 EL 349
E
Sbjct: 272 EF 273
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 170
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 229
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 230 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 272
Query: 348 EL 349
E
Sbjct: 273 EF 274
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 130 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 175
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 176 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 234
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 235 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 277
Query: 348 EL 349
E
Sbjct: 278 EF 279
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 169
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 228
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 229 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 271
Query: 348 EL 349
E
Sbjct: 272 EF 273
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 172
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 231
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 232 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 274
Query: 348 EL 349
E
Sbjct: 275 EF 276
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 173
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 232
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 233 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 275
Query: 348 EL 349
E
Sbjct: 276 EF 277
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 169
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 228
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 229 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 271
Query: 348 EL 349
E
Sbjct: 272 EF 273
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 170
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 229
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 230 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 272
Query: 348 EL 349
E
Sbjct: 273 EF 274
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 32/240 (13%)
Query: 66 SSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFH-KELQLLCKLDHPG 122
S + L + G + VY+ G VA+K+ L + E + +E+ L+ +L H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 123 LAKFVAAHAKPPNYMFFFEFYE--------SRNLAEKLHVEEWSPSVDQVLMIAAQLAKA 174
+ + FEF + SR + E ++ V QL +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLE----LNLVKYFQWQLLQG 120
Query: 175 LQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFH 234
L + H I+HRD+KP N+L+++ L DFGLA R+ G P F
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA--------------RAFGIPVNTFS 166
Query: 235 KKNMVGTLIYMAPEILK-KEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEM 293
+ V TL Y AP++L +S D++S G + E++TG + E Q + ++
Sbjct: 167 SE--VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDI 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 158 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 203
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 262
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 263 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 305
Query: 348 EL 349
E
Sbjct: 306 EF 307
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 127 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 172
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 231
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 232 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 274
Query: 348 EL 349
E
Sbjct: 275 EF 276
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
+KK ++ +E+ + E ++L HP L + F E+ L L
Sbjct: 42 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 101
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYR 212
E S D+ A++ AL YLH+ +V+RD+K N++LD++ + DFGL +
Sbjct: 102 RERVF-SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--K 158
Query: 213 ENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
E +K+ G K GT Y+APE+L+ + D + G+ + E++
Sbjct: 159 EGIKD--------------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 273 TGVVPY 278
G +P+
Sbjct: 205 CGRLPF 210
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 106 DNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL 165
+ +E+ +L ++ H + + + + E L + L +E S S ++
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEAT 118
Query: 166 MIAAQLAKALQYLHNLGIVHRDVKPANV-LLDRNL-CPH--LADFGLAEYRENLKEISLK 221
Q+ + YLH I H D+KP N+ LLD+N+ PH L DFGLA E+
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED------- 171
Query: 222 NWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-D 280
G KN+ GT ++APEI+ E ++D++S G+ LL+G P+ D
Sbjct: 172 ----------GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 281 LRAEAQAH-TVLEMNYTEQ 298
+ E A+ T + ++ E+
Sbjct: 222 TKQETLANITSVSYDFDEE 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 149 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 194
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 195 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 253
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 254 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 296
Query: 348 EL 349
E
Sbjct: 297 EF 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
+KK ++ +E+ + E ++L HP L + F E+ L L
Sbjct: 41 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 100
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYR 212
E S D+ A++ AL YLH+ +V+RD+K N++LD++ + DFGL +
Sbjct: 101 RERVF-SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--K 157
Query: 213 ENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
E +K+ G K GT Y+APE+L+ + D + G+ + E++
Sbjct: 158 EGIKD--------------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
Query: 273 TGVVPY 278
G +P+
Sbjct: 204 CGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 94 VKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLH 153
+KK ++ +E+ + E ++L HP L + F E+ L L
Sbjct: 43 LKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 102
Query: 154 VEEWSPSVDQVLMIAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYR 212
E S D+ A++ AL YLH+ +V+RD+K N++LD++ + DFGL +
Sbjct: 103 RERVF-SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--K 159
Query: 213 ENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
E +K+ G K GT Y+APE+L+ + D + G+ + E++
Sbjct: 160 EGIKD--------------GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 205
Query: 273 TGVVPY 278
G +P+
Sbjct: 206 CGRLPF 211
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 34/243 (13%)
Query: 108 FHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMI 167
F E ++ +DHP L + + P + L E +H + + +L
Sbjct: 87 FMDEALIMASMDHPHLVRLLGV-CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 145
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
Q+AK + YL +VHRD+ NVL+ + DFGLA L E K + + G
Sbjct: 146 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA----RLLEGDEKEYNADG 201
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQ 286
G K +MA E + + +SDV+S+G++I EL+T G PY + +
Sbjct: 202 ---GKMPIK-------WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR-E 250
Query: 287 AHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
+LE Q P + +++ + ++ +CW + +RP F ++A
Sbjct: 251 IPDLLEKGERLPQ-----------PPICTID------VYMVMVKCWMIDADSRPKFKELA 293
Query: 347 LEL 349
E
Sbjct: 294 AEF 296
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFG A + G
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA--------------KLLGA 171
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 230
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++++CW + +RP F ++ +
Sbjct: 231 SSILEKGERLPQ-----------PPICTID------VYMIMRKCWMIDADSRPKFRELII 273
Query: 348 EL 349
E
Sbjct: 274 EF 275
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 34/243 (13%)
Query: 108 FHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMI 167
F E ++ +DHP L + + P + L E +H + + +L
Sbjct: 64 FMDEALIMASMDHPHLVRLLGV-CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
Q+AK + YL +VHRD+ NVL+ + DFGLA L E K + + G
Sbjct: 123 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA----RLLEGDEKEYNADG 178
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQ 286
+ +MA E + + +SDV+S+G++I EL+T G PY + +
Sbjct: 179 GKM----------PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR-E 227
Query: 287 AHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIA 346
+LE Q P + +++ + ++ +CW + +RP F ++A
Sbjct: 228 IPDLLEKGERLPQ-----------PPICTID------VYMVMVKCWMIDADSRPKFKELA 270
Query: 347 LEL 349
E
Sbjct: 271 AEF 273
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFG A + G
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA--------------KLLGA 171
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 230
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++++CW + +RP F ++ +
Sbjct: 231 SSILEKGERLPQ-----------PPICTID------VYMIMRKCWMIDADSRPKFRELII 273
Query: 348 EL 349
E
Sbjct: 274 EF 275
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+A+ + YL + +VHRD+ NVL+ + DFGLA + G
Sbjct: 121 VQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA--------------KLLGA 166
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 167 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 225
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 226 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 268
Query: 348 EL 349
E
Sbjct: 269 EF 270
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 74 IARGAESVVY--EATLDGRKVAVKKPILSTSEELDNFHKELQLLCK-LDHPGLAKFVAAH 130
+ RG+ V+ E G + AVKK L+ F E + C L P + A
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKK------VRLEVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 131 AKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKP 190
+ P F E E +L + + + P D+ L Q + L+YLH+ I+H DVK
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPE-DRALYYLGQALEGLEYLHSRRILHGDVKA 213
Query: 191 ANVLLDRNLC-PHLADFGLAEYRENLKEISLKNWRSSGKP--TGGFHKKNMVGTLIYMAP 247
NVLL + L DFG A + L+ GK TG + + GT +MAP
Sbjct: 214 DNVLLSSDGSHAALCDFGHA--------VCLQP-DGLGKSLLTGDY----IPGTETHMAP 260
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTD-------LRAEAQAHTVLEMNYTEQQL 300
E++ K DV+S + +L G P+T L+ ++ V E+ + L
Sbjct: 261 EVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPL 320
Query: 301 TAAVVSGGLR--PI--LASLELG 319
TA + GLR PI +++ ELG
Sbjct: 321 TAQAIQEGLRKEPIHRVSAAELG 343
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 172
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S +P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 173 -SLTEP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 74 IARGAESVVY--EATLDGRKVAVKKPILSTSEELDNFHKELQLLCK-LDHPGLAKFVAAH 130
+ RG+ V+ E G + AVKK L+ F E + C L P + A
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKK------VRLEVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 131 AKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKP 190
+ P F E E +L + + + P D+ L Q + L+YLH+ I+H DVK
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPE-DRALYYLGQALEGLEYLHSRRILHGDVKA 194
Query: 191 ANVLLDRNLC-PHLADFGLAEYRENLKEISLKNWRSSGKP--TGGFHKKNMVGTLIYMAP 247
NVLL + L DFG A + L+ GK TG + + GT +MAP
Sbjct: 195 DNVLLSSDGSHAALCDFGHA--------VCLQP-DGLGKDLLTGDY----IPGTETHMAP 241
Query: 248 EILKKEIHSEKSDVYSFGISINELLTGVVPYTD-------LRAEAQAHTVLEMNYTEQQL 300
E++ K DV+S + +L G P+T L+ ++ V E+ + L
Sbjct: 242 EVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPL 301
Query: 301 TAAVVSGGLR--PI--LASLELG 319
TA + GLR PI +++ ELG
Sbjct: 302 TAQAIQEGLRKEPIHRVSAAELG 324
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 129
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 130 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 180
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 181 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDR-----NLCPHLADFGLA-EY-- 211
S+ VLMIA QL ++Y+H+ +++RDVKP N L+ R H+ DFGLA EY
Sbjct: 103 SLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYID 162
Query: 212 RENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINEL 271
E K I + +S + GT YM+ + S + D+ + G
Sbjct: 163 PETKKHIPYREHKS------------LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 210
Query: 272 LTGVVPYTDLRAEA 285
L G +P+ L+A+
Sbjct: 211 LRGSLPWQGLKADT 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 66 SSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFH----KELQLLCKLD 119
S Y L+ I +G V++A G+KVA+KK ++ +E F +E+++L L
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIKILQLLK 75
Query: 120 HPGLAKFVA---AHAKPPN-----YMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
H + + A P N F+F E +LA L ++ ++ + L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
L Y+H I+HRD+K ANVL+ R+ LADFGLA + SL K +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA------RAFSL------AKNSQ 182
Query: 232 GFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGISINELLT 273
N V TL Y PE+L E + D++ G + E+ T
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFG A + G
Sbjct: 131 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA--------------KLLGA 176
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 235
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 236 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 278
Query: 348 EL 349
E
Sbjct: 279 EF 280
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 127 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 179
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 180 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFG A + G
Sbjct: 124 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA--------------KLLGA 169
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 228
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 229 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 271
Query: 348 EL 349
E
Sbjct: 272 EF 273
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFG A + G
Sbjct: 126 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA--------------KLLGA 171
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 230
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 231 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 273
Query: 348 EL 349
E
Sbjct: 274 EF 275
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 169 AQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGK 228
Q+AK + YL + +VHRD+ NVL+ + DFG A + G
Sbjct: 128 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA--------------KLLGA 173
Query: 229 PTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEAQA 287
+H + + +MA E + I++ +SDV+S+G+++ EL+T G PY + A ++
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-SEI 232
Query: 288 HTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDIAL 347
++LE Q P + +++ + ++ +CW + +RP F ++ +
Sbjct: 233 SSILEKGERLPQ-----------PPICTID------VYMIMVKCWMIDADSRPKFRELII 275
Query: 348 EL 349
E
Sbjct: 276 EF 277
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 66 SSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFH----KELQLLCKLD 119
S Y L+ I +G V++A G+KVA+KK ++ +E F +E+++L L
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIKILQLLK 75
Query: 120 HPGLAKFVA---AHAKPPN-----YMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
H + + A P N F+F E +LA L ++ ++ + L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
L Y+H I+HRD+K ANVL+ R+ LADFGLA + SL K +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA------RAFSL------AKNSQ 182
Query: 232 GFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGISINELLT 273
N V TL Y PE+L E + D++ G + E+ T
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 128 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 180
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 181 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 126 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 178
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 179 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 66 SSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFH----KELQLLCKLD 119
S Y L+ I +G V++A G+KVA+KK ++ +E F +E+++L L
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIKILQLLK 74
Query: 120 HPGLAKFVA---AHAKPPN-----YMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
H + + A P N F+F E +LA L ++ ++ + L
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQML 133
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
L Y+H I+HRD+K ANVL+ R+ LADFGLA + SL K +
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA------RAFSL------AKNSQ 181
Query: 232 GFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGISINELLT 273
N V TL Y PE+L E + D++ G + E+ T
Sbjct: 182 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 66 SSYTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFH----KELQLLCKLD 119
S Y L+ I +G V++A G+KVA+KK ++ +E F +E+++L L
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--GFPITALREIKILQLLK 75
Query: 120 HPGLAKFVA---AHAKPPN-----YMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQL 171
H + + A P N F+F E +LA L ++ ++ + L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTG 231
L Y+H I+HRD+K ANVL+ R+ LADFGLA + SL K +
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA------RAFSL------AKNSQ 182
Query: 232 GFHKKNMVGTLIYMAPEILKKEI-HSEKSDVYSFGISINELLT 273
N V TL Y PE+L E + D++ G + E+ T
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 163 QVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKN 222
+ + I Q+ AL H G HRDVKP N+L+ + +L DFG+A + K L
Sbjct: 135 RAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL-- 192
Query: 223 WRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYT-DL 281
N VGTL Y APE + + ++D+Y+ + E LTG PY D
Sbjct: 193 -------------GNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
Query: 282 RAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNR 339
+ AH + A+ P +++ G+P + ++I R NP +R
Sbjct: 240 LSVXGAH-----------INQAI------PRPSTVRPGIPVAFDAVIARGXAKNPEDR 280
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 121 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 173
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 174 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 172
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 173 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 136 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 188
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 189 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 174
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 175 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L + P +++L ++
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP--EEILGKVS 120
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ + L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 121 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 171
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YMAPE L+ +S +SD++S G+S+ EL G P
Sbjct: 172 ---------SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 87/228 (38%), Gaps = 25/228 (10%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDN-----FHKELQLL 115
+ L + ++ I RGA V + + IL+ E L F +E +L
Sbjct: 85 MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL 144
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKAL 175
D + A + ++Y +L L E D ++ A+
Sbjct: 145 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 204
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
+H L VHRD+KP NVLLD N LADFG LK G
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC----------LKM-----NDDGTVQS 249
Query: 236 KNMVGTLIYMAPEILKKE-----IHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PEIL+ + + D +S G+ + E+L G P+
Sbjct: 250 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 110
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 161
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 162 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 110
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 161
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 162 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 47/257 (18%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 172
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 173 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 223
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRA---E 284
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P A E
Sbjct: 224 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE 274
Query: 285 AQAHTVLEMNYTEQQLTAAVVSGGL-------RPILASLEL----------GLPASILSL 327
+E + E L RP +A EL LP+++ SL
Sbjct: 275 LMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSL 334
Query: 328 -----IQRCWDGNPHNR 339
+ +C NP R
Sbjct: 335 EFQDFVNKCLIKNPAER 351
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 110
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 161
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 162 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 110
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 161
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 162 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 218
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 219 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 174
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 175 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 87/228 (38%), Gaps = 25/228 (10%)
Query: 61 LHLPPSSYTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDN-----FHKELQLL 115
+ L + ++ I RGA V + + IL+ E L F +E +L
Sbjct: 69 MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL 128
Query: 116 CKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKAL 175
D + A + ++Y +L L E D ++ A+
Sbjct: 129 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 188
Query: 176 QYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
+H L VHRD+KP NVLLD N LADFG LK G
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC----------LKM-----NDDGTVQS 233
Query: 236 KNMVGTLIYMAPEILKKE-----IHSEKSDVYSFGISINELLTGVVPY 278
VGT Y++PEIL+ + + D +S G+ + E+L G P+
Sbjct: 234 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 110
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 161
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 162 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 113
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + + E++
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDEMA-------- 163
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 164 --------NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 172 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHN- 224
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
S P T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 225 -SLTTP---------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
Y ++ I GA VV A L G++VA+KK I + + + N + EL++L H
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKK-IPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEK-LH--VEEWSP-SVDQVLMIAAQLAKALQYL 178
+ Y F Y +L E LH + P +++ V QL + L+Y+
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYM 175
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+L++ N + DFG+A + +
Sbjct: 176 HSAQVIHRDLKPSNLLVNENCELKIGDFGMA------------RGLCTSPAEHQYFMTEY 223
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLT 273
V T Y APE+ L +++ D++S G E+L
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
Y ++ I GA VV A L G++VA+KK I + + + N + EL++L H
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKK-IPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAEK-LH--VEEWSP-SVDQVLMIAAQLAKALQYL 178
+ Y F Y +L E LH + P +++ V QL + L+Y+
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYM 174
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+L++ N + DFG+A + +
Sbjct: 175 HSAQVIHRDLKPSNLLVNENCELKIGDFGMA------------RGLCTSPAEHQYFMTEY 222
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLT 273
V T Y APE+ L +++ D++S G E+L
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 22/117 (18%)
Query: 167 IAAQLAKALQYLHN-LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRS 225
IA + KAL++LH+ L ++HRDVKP+NVL++ DFG++ Y L + K+ +
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGY---LVDDVAKDIDA 197
Query: 226 SGKPTGGFHKKNMVGTLIYMAPEILKKEI----HSEKSDVYSFGISINELLTGVVPY 278
KP Y APE + E+ +S KSD++S GI+ EL PY
Sbjct: 198 GCKP--------------YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY 240
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 110 KELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-MIA 168
+ELQ+L + + P + F A E + +L + L P +Q+L ++
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 137
Query: 169 AQLAKALQYLHNL-GIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSG 227
+ K L YL I+HRDVKP+N+L++ L DFG++ + S+ N
Sbjct: 138 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN----- 188
Query: 228 KPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVP 277
+ VGT YM+PE L+ +S +SD++S G+S+ E+ G P
Sbjct: 189 ---------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 66 SSYTLLSPIARGAESVVYEA---TLDGRKVAVKKPILSTSEE---LDNFHKE--LQLLCK 117
Y ++ I GA V++A GR VA+K+ + T EE L + L+ L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 118 LDHPGLAKF-----VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLA 172
+HP + + V+ + FE + V E + + + QL
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 173 KALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGG 232
+ L +LH+ +VHRD+KP N+L+ + LADFGLA ++
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT------------- 177
Query: 233 FHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
++V TL Y APE+L + ++ D++S G E+
Sbjct: 178 ----SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 33/240 (13%)
Query: 104 ELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQ 163
+ + +E Q++ +LD+P + + + + M E L + L + V
Sbjct: 53 DTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSN 111
Query: 164 VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNW 223
V + Q++ ++YL VHRD+ NVLL ++DFGL+ + + S
Sbjct: 112 VAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS--KALGADDSYYTA 169
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLR 282
RS+GK L + APE + S +SDV+S+G+++ E L+ G PY ++
Sbjct: 170 RSAGK-----------WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
Query: 283 AEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
A + G R P + +L+ CW +RP F
Sbjct: 219 GPE---------------VMAFIEQGKR---MECPPECPPELYALMSDCWIYKWEDRPDF 260
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 66 SSYTLLSPIARGAESVVYEA---TLDGRKVAVKKPILSTSEE---LDNFHKE--LQLLCK 117
Y ++ I GA V++A GR VA+K+ + T EE L + L+ L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 118 LDHPGLAKF-----VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLA 172
+HP + + V+ + FE + V E + + + QL
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 173 KALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGG 232
+ L +LH+ +VHRD+KP N+L+ + LADFGLA ++
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT------------- 177
Query: 233 FHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
++V TL Y APE+L + ++ D++S G E+
Sbjct: 178 ----SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 68 YTLLSPIARGAESVVYEA---TLDGRKVAVKKPILSTSEE---LDNFHKE--LQLLCKLD 119
Y ++ I GA V++A GR VA+K+ + T EE L + L+ L +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 120 HPGLAKF-----VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKA 174
HP + + V+ + FE + V E + + + QL +
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 175 LQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFH 234
L +LH+ +VHRD+KP N+L+ + LADFGLA ++
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT--------------- 177
Query: 235 KKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
++V TL Y APE+L + ++ D++S G E+
Sbjct: 178 --SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 21/231 (9%)
Query: 67 SYTLLSPIARGAESVVYE--ATLDGRKVAVKKPILSTSEELD-NFHKELQLLCKLDHPGL 123
+Y L + G + VY+ + L VA+K+ L E +E+ LL L H +
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 124 AKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGI 183
+ FE Y ++L + L ++ V + QL + L Y H +
Sbjct: 63 VTLHDIIHTEKSLTLVFE-YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121
Query: 184 VHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLI 243
+HRD+KP N+L++ LADFGLA R+ PT + N V TL
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLA--------------RAKSIPTKTY--DNEVVTLW 165
Query: 244 YMAPEILKKEI-HSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEM 293
Y P+IL +S + D++ G E+ TG + E Q H + +
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI 216
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRN-----LCPHLADFGLA-EY-- 211
++ VLMIA QL ++Y+H+ +++RDVKP N L+ R H+ DFGLA EY
Sbjct: 95 TLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYID 154
Query: 212 RENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINEL 271
E K I + +S + GT YM+ + S + D+ + G
Sbjct: 155 PETKKHIPYREHKS------------LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 202
Query: 272 LTGVVPYTDLRAEA 285
L G +P+ L+A+
Sbjct: 203 LRGSLPWQGLKADT 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 20/114 (17%)
Query: 171 LAKALQYLHNLGIVHRDVKPANVL-LDRNLCPH---LADFGLAEYRENLKEISLKNWRSS 226
+ K ++YLH G+VHRD+KP+N+L +D + P + DFG A K++ +N
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA------KQLRAEN---- 174
Query: 227 GKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
G + N V APE+L+++ + D++S G+ + +LTG P+ +
Sbjct: 175 GLLMTPCYTANFV------APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLL-----DRNLCPHLADFGLA-EY-- 211
++ VLMIA QL ++Y+H +++RDVKP N L+ R H+ DFGLA EY
Sbjct: 98 TLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYID 157
Query: 212 RENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINEL 271
E K I + K++ GT YM+ + S + D+ + G
Sbjct: 158 PETKKHIPYRE------------HKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 205
Query: 272 LTGVVPYTDLRAEA 285
L G +P+ L+A+
Sbjct: 206 LRGSLPWQGLKADT 219
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 138 FFFEFYESR------NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
F+ F + R ++ ++ H E SV + +A AL +LHN GI HRD+KP
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASV-----VVQDVASALDFLHNKGIAHRDLKPE 140
Query: 192 NVLLDR--NLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPE 248
N+L + + P + DFGL S P G+ YMAPE
Sbjct: 141 NILCEHPNQVSPVKICDFGLG---------SGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 249 IL-----KKEIHSEKSDVYSFGISINELLTGVVPYT 279
++ + I+ ++ D++S G+ + LL+G P+
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 48/261 (18%)
Query: 461 MFGIFDGHRGSAAAEFSARALPG--FLQNLGSTTRPTDA---LLEAFIRTDVAFRNELDS 515
++G+F+G+ G+ F A+ L L L + D LL+AF + +F +D
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 516 LRKSK--------RVVQKDWHPGCTAIAALIVRNRLFVANAGDCRAILCR----GGHPFA 563
K + ++++ G A+ A+++ N+L+VAN G RA+LC+ G
Sbjct: 126 ALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQ 185
Query: 564 LSRDHVASCLEERERVVSAG---------GNVNWQVDTWRVGPPALQVTRSIGDDDL--- 611
L+ DH +E R+ G G + Q T R+G +V D DL
Sbjct: 186 LNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGD--YKVKYGYTDIDLLSA 243
Query: 612 ---KPAVXXXXXXXXXXXXXXDEYLVMASDGLWDVVSHVEAVGIIKDTVKEPGMCSKRLA 668
KP + +LV+ S+GL+ + + PG ++ +A
Sbjct: 244 AKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKAL----------EAAHGPGQANQEIA 293
Query: 669 ----TEAAERGSKDNITVIVV 685
TE A++ S D + VV
Sbjct: 294 AMIDTEFAKQTSLDAVAQAVV 314
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 114/285 (40%), Gaps = 51/285 (17%)
Query: 74 IARGAESVVY-----EATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKFVA 128
I RG+ VY E T++ ++ L+ SE F +E + L L HP + +F
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER-QRFKEEAEXLKGLQHPNIVRFYD 92
Query: 129 AHAKPPN----YMFFFEFYESRNLAEKLHVEEWSPSVDQVLMI-AAQLAKALQYLHNLG- 182
+ + E S L K +++ + +VL Q+ K LQ+LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTL--KTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTP 150
Query: 183 -IVHRDVKPANVLLDR-NLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
I+HRD+K N+ + + D GLA LK S K ++G
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRASFA--------------KAVIG 192
Query: 241 TLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQL 300
T + APE + E + E DVY+FG E T PY++ + AQ +
Sbjct: 193 TPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIY------------ 239
Query: 301 TAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
V+ G++P AS + + +I+ C N R S D+
Sbjct: 240 --RRVTSGVKP--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSS 226
Q+AK + YL G+VHR++ NVLL +ADFG+A+ + K++ ++
Sbjct: 121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 227 GKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEA 285
K +MA E + ++ +SDV+S+G+++ EL+T G PY LR A
Sbjct: 181 IK---------------WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-A 224
Query: 286 QAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ +LE Q P + +++ + ++ +CW + + RP+F ++
Sbjct: 225 EVPDLLEKGERLAQ-----------PQICTID------VYMVMVKCWMIDENIRPTFKEL 267
Query: 346 ALEL 349
A E
Sbjct: 268 ANEF 271
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 48/229 (20%)
Query: 80 SVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLD-HPGLAKFVAAHAKPPNYMF 138
+VV++ + GR VAVK+ ++ D E++LL + D HP + ++ +
Sbjct: 48 TVVFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 104
Query: 139 FFEF--------YESRNLA-EKLHVE-EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E ES+N++ E L ++ E++P + + Q+A + +LH+L I+HRD+
Sbjct: 105 ALELCNLNLQDLVESKNVSDENLKLQKEYNP-----ISLLRQIASGVAHLHSLKIIHRDL 159
Query: 189 KPANVLLD-------------RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
KP N+L+ NL ++DFGL + + SG+ +
Sbjct: 160 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD------------SGQXXFRXNL 207
Query: 236 KNMVGTLIYMAPEILKKEIH---SEKSDVYSFGISINELLT-GVVPYTD 280
N GT + APE+L++ + D++S G +L+ G P+ D
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 35/184 (19%)
Query: 168 AAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAE-YRENLKEISLKNWRSS 226
Q+AK + YL G+VHR++ NVLL +ADFG+A+ + K++ ++
Sbjct: 139 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 227 GKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLRAEA 285
K +MA E + ++ +SDV+S+G+++ EL+T G PY LR A
Sbjct: 199 IK---------------WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-A 242
Query: 286 QAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSFSDI 345
+ +LE Q P + +++ + ++ +CW + + RP+F ++
Sbjct: 243 EVPDLLEKGERLAQ-----------PQICTID------VYMVMVKCWMIDENIRPTFKEL 285
Query: 346 ALEL 349
A E
Sbjct: 286 ANEF 289
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 48/229 (20%)
Query: 80 SVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLD-HPGLAKFVAAHAKPPNYMF 138
+VV++ + GR VAVK+ ++ D E++LL + D HP + ++ +
Sbjct: 48 TVVFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 104
Query: 139 FFEF--------YESRNLA-EKLHVE-EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E ES+N++ E L ++ E++P + + Q+A + +LH+L I+HRD+
Sbjct: 105 ALELCNLNLQDLVESKNVSDENLKLQKEYNP-----ISLLRQIASGVAHLHSLKIIHRDL 159
Query: 189 KPANVLLD-------------RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
KP N+L+ NL ++DFGL + + SG+ +
Sbjct: 160 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD------------SGQXXFRXNL 207
Query: 236 KNMVGTLIYMAPEILKKEIH---SEKSDVYSFGISINELLT-GVVPYTD 280
N GT + APE+L++ + D++S G +L+ G P+ D
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 66 SSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFH--KELQLLCKLD-- 119
S Y ++ I GA VY+A G VA+K + EE +E+ LL +L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 120 -HPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS---VDQVLMIAAQLAK 173
HP + + V A ++ + +E + + ++++ P + + + Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 174 ALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
L +LH IVHRD+KP N+L+ LADFGLA + +++ + P
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR---------IYSYQMALAP---- 170
Query: 234 HKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
+V TL Y APE+L + ++ D++S G E+
Sbjct: 171 ----VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 20/115 (17%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLLDR---NLCPHLADFGLAEYRENLKEISLKNW 223
I + +A+QYLH++ I HRDVKP N+L N L DFG A KE + N
Sbjct: 166 IXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTSHNS 219
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
++ T Y+APE+L E + + D +S G+ LL G P+
Sbjct: 220 LTTP-----------CYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 66 SSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFH--KELQLLCKLD-- 119
S Y ++ I GA VY+A G VA+K + EE +E+ LL +L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 120 -HPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS---VDQVLMIAAQLAK 173
HP + + V A ++ + +E + + ++++ P + + + Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 174 ALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
L +LH IVHRD+KP N+L+ LADFGLA + +++ + P
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR---------IYSYQMALDP---- 170
Query: 234 HKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
+V TL Y APE+L + ++ D++S G E+
Sbjct: 171 ----VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 81 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 138
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 185
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 46/264 (17%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF- 126
Y+ +SP+ GA V+ A + V + + L++ C ++ P L K
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLED--------CWIEDPKLGKVT 77
Query: 127 ----VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWS-----------PSVDQVL--MIAA 169
+ + + N + + +E++ + + + S P +D+ L I
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 170 QLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKP 229
QL A+ YL I+HRD+K N+++ + L DFG A Y E GK
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER------------GKL 185
Query: 230 TGGFHKKNMVGTLIYMAPEILKKEIH-SEKSDVYSFGISINELLTGVVPYTDLRAEAQAH 288
F GT+ Y APE+L + + +++S G+++ L+ P+ +L +A
Sbjct: 186 FYTF-----CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA- 239
Query: 289 TVLEMNYTEQQLTAAVVSGGLRPI 312
+ Y + ++VSG L+P+
Sbjct: 240 -AIHPPYLVSKELMSLVSGLLQPV 262
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDR-----NLCPHLADFGLA-EY-- 211
S+ VLMIA QL ++Y+H+ +++RDVKP N L+ R H+ DF LA EY
Sbjct: 103 SLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162
Query: 212 RENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINEL 271
E K I + +S + GT YM+ + S + D+ + G
Sbjct: 163 PETKKHIPYREHKS------------LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 210
Query: 272 LTGVVPYTDLRAEA 285
L G +P+ L+A+
Sbjct: 211 LRGSLPWQGLKADT 224
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDR-----NLCPHLADFGLA-EY-- 211
S+ VLMIA QL ++Y+H+ +++RDVKP N L+ R H+ DF LA EY
Sbjct: 124 SLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 183
Query: 212 RENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINEL 271
E K I + +S + GT YM+ + S + D+ + G
Sbjct: 184 PETKKHIPYREHKS------------LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 231
Query: 272 LTGVVPYTDLRAEA 285
L G +P+ L+A+
Sbjct: 232 LRGSLPWQGLKADT 245
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 66 SSYTLLSPIARGAESVVYEATLDGRK----VAVKKPILSTSEE--LDNFHKELQLLCKLD 119
Y L I G V++A R+ VA+K+ L +E + +E+ LL +L
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK 59
Query: 120 HPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLH 179
H + + FEF + ++L + + V QL K L + H
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 180 NLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMV 239
+ ++HRD+KP N+L++RN LADFGLA R+ G P + + V
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLA--------------RAFGIPVRCYSAE--V 162
Query: 240 GTLIYMAPEIL-KKEIHSEKSDVYSFGISINELLTGVVP 277
TL Y P++L +++S D++S G EL P
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 87 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 144
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLA-------RVADPDHDHTGFLT------EY 191
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 39/294 (13%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 81 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 138
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 185
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLE-MNYT 296
V T Y APEI L + +++ D++S G + E+L+ + Q + +L +
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 245
Query: 297 EQQLTAAVVSGGLRPILASL--ELGLP---------ASILSLIQRCWDGNPHNR 339
EQ+ +++ R L SL + +P + L L+ + NPH R
Sbjct: 246 EQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 299
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 88 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 145
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 192
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 89 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 146
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 193
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 80 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 137
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 184
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 87 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 144
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 191
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 74 IARGAE-SVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLD-HPGLAKFVAAHA 131
+ GAE ++VY D R VAVK+ + D +E+QLL + D HP + ++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVIRYFCT-E 87
Query: 132 KPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
K + + + L E + ++++ + + + Q L +LH+L IVHRD+KP
Sbjct: 88 KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPH 147
Query: 192 NVLLDR-----NLCPHLADFGLAEYRENLKEISLKNW---RSSGKPTGGFHKKNMVGTLI 243
N+L+ + ++DFGL K++++ R SG P GT
Sbjct: 148 NILISMPNAHGKIKAMISDFGLC------KKLAVGRHSFSRRSGVP----------GTEG 191
Query: 244 YMAPEILK---KEIHSEKSDVYSFG 265
++APE+L KE + D++S G
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAG 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 67 SYTLLSPIARGAESVVYEATL-DGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPG--- 122
+YT I G+ VV++A L + +VA+KK + + N +ELQ++ + HP
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKK--VLQDKRFKN--RELQIMRIVKHPNVVD 96
Query: 123 LAKFVAAHAKPPNYMFF---FEFYESRNLAEKLHVEEWSPSVDQVL--MIAAQLAKALQY 177
L F ++ + +F E+ H + ++ +L + QL ++L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 178 LHNLGIVHRDVKPANVLLD-RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKK 236
+H++GI HRD+KP N+LLD + L DFG A+ +G+P
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI------------LIAGEPN-----V 199
Query: 237 NMVGTLIYMAPE-ILKKEIHSEKSDVYSFGISINELLTG 274
+ + + Y APE I ++ D++S G + EL+ G
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 87 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 144
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA + TG +
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-----------PDHDHTGFLXE--X 191
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 88 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 145
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA + TG +
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-----------PDHDHTGFLXE--X 192
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 58/302 (19%)
Query: 70 LLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK-ELQLLCKLDHPGLAKFVA 128
++ I +G V+ G KVAVK + T+EE F + E+ + H + F+A
Sbjct: 41 MVKQIGKGRYGEVWMGKWRGEKVAVK--VFFTTEEASWFRETEIYQTVLMRHENILGFIA 98
Query: 129 AHAKPP----NYMFFFEFYESRNLAEKLHVEEWSPSVD--QVLMIAAQLAKALQYLHNL- 181
A K +++E+ +L + L S ++D +L +A L +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 182 -------GIVHRDVKPANVLLDRNLCPHLADFGLA-EYRENLKEISLKNWRSSGKPTGGF 233
I HRD+K N+L+ +N +AD GLA ++ + E+ +
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP------------ 202
Query: 234 HKKNMVGTLIYMAPEILKKEIHSEK------SDVYSFGISINELLTGVVPYTDLRAEAQA 287
VGT YM PE+L + ++ +D+YSFG+ + E+ V + E Q
Sbjct: 203 -PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS-GGIVEEYQL 260
Query: 288 --HTVLEMNYTEQQLTAAVVSGGLRPILAS--------LELGLPASILSLIQRCWDGNPH 337
H ++ + + + + V LRP + ++G L+ CW NP
Sbjct: 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG------KLMTECWAHNPA 314
Query: 338 NR 339
+R
Sbjct: 315 SR 316
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 20/114 (17%)
Query: 171 LAKALQYLHNLGIVHRDVKPANVL-LDRNLCPH---LADFGLAEYRENLKEISLKNWRSS 226
+ K ++YLH G+VHRD+KP+N+L +D + P + DFG A K++ +N
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA------KQLRAEN---- 174
Query: 227 GKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTD 280
G + N V APE+L+++ + D++S G+ + LTG P+ +
Sbjct: 175 GLLXTPCYTANFV------APEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN 222
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEE---LDNFHKELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E +E+++L + H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 87 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 144
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLA-------RVADPDHDHTGFLT------EY 191
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 107 NFHKELQLLCKLDHPGLAKFV-AAHAKPPNYMFFFEFYESRNLAEKLH-VEEWSPSVDQV 164
N KE+QLL +L H + + V + + M+ Y + E L V E V Q
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQA 111
Query: 165 LMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWR 224
QL L+YLH+ GIVH+D+KP N+LL ++ G+AE + R
Sbjct: 112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA--ADDTCR 169
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEILK--KEIHSEKSDVYSFGISINELLTGVVPY 278
+S G+ + PEI K D++S G+++ + TG+ P+
Sbjct: 170 TS------------QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E + E+++L + H +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 87 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 191
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 33/240 (13%)
Query: 104 ELDNFHKELQLLCKLDHPGLAKFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQ 163
+ + +E Q++ +LD+P + + + + M E L + L + V
Sbjct: 379 DTEEMMREAQIMHQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSN 437
Query: 164 VLMIAAQLAKALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNW 223
V + Q++ ++YL VHR++ NVLL ++DFGL+ + + S
Sbjct: 438 VAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS--KALGADDSYYTA 495
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLT-GVVPYTDLR 282
RS+GK L + APE + S +SDV+S+G+++ E L+ G PY ++
Sbjct: 496 RSAGK-----------WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
Query: 283 AEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGNPHNRPSF 342
A + G R P + +L+ CW +RP F
Sbjct: 545 GPE---------------VMAFIEQGKR---MECPPECPPELYALMSDCWIYKWEDRPDF 586
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 66 SSYTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFH--KELQLLCKLD-- 119
S Y ++ I GA VY+A G VA+K + EE +E+ LL +L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 120 -HPGLAKF--VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPS---VDQVLMIAAQLAK 173
HP + + V A ++ + +E + + ++++ P + + + Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 174 ALQYLHNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGF 233
L +LH IVHRD+KP N+L+ LADFGLA + +++ + P
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR---------IYSYQMALFP---- 170
Query: 234 HKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELL 272
+V TL Y APE+L + ++ D++S G E+
Sbjct: 171 ----VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEE---LDNFHKELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E +E+++L + H +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 105 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 209
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E + E+++L + H +
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 93 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 197
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E + E+++L + H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 189
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 52/233 (22%)
Query: 80 SVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLD-HPGLAKFVAAHAKPPNYMF 138
+VV++ + GR VAVK+ ++ D E++LL + D HP + ++ +
Sbjct: 30 TVVFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86
Query: 139 FFEF--------YESRNLA-EKLHVE-EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E ES+N++ E L ++ E++P + + Q+A + +LH+L I+HRD+
Sbjct: 87 ALELCNLNLQDLVESKNVSDENLKLQKEYNP-----ISLLRQIASGVAHLHSLKIIHRDL 141
Query: 189 KPANVLLD-------------RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
KP N+L+ NL ++DFGL + + SG+ + +
Sbjct: 142 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD------------SGQSSFRTNL 189
Query: 236 KNMVGTLIYMAPEILK-------KEIHSEKSDVYSFGISINELLT-GVVPYTD 280
N GT + APE+L+ K + D++S G +L+ G P+ D
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEE---LDNFHKELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E +E+++L + H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 189
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA+KK +S E + E+++L + H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 87 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKCQHLSNDHICYFLYQILRGLKYI 144
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 191
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E + E+++L + H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 189
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 68 YTLLSPIARGAESVVYEA--TLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPG 122
YT LS I GA +V A L+ +VA++K +S E + E+++L + H
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRK--ISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 123 LAKFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYL 178
+ + + P + Y ++L E KL ++ S D + Q+ + L+Y+
Sbjct: 87 IIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYI 144
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H+ ++HRD+KP+N+LL+ + DFGLA ++ + +G T
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EY 191
Query: 239 VGTLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
V T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEE---LDNFHKELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E +E+++L + H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 189
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 20/232 (8%)
Query: 68 YTLLSPIARGAESVVYEAT-LDGRKVAVKKPILSTSEELDNFHKELQLLCKLDHPGLAKF 126
Y + + RG +V+ +K + K + + KE+ +L H +
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Query: 127 VAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHR 186
+ + FEF ++ E+++ + + +++ Q+ +ALQ+LH+ I H
Sbjct: 67 HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF 126
Query: 187 DVKPANVLLD--RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIY 244
D++P N++ R+ + +FG A KP F + + Y
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQAR---------------QLKPGDNF--RLLFTAPEY 169
Query: 245 MAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYT 296
APE+ + ++ S +D++S G + LL+G+ P+ + ++ YT
Sbjct: 170 YAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT 221
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLA 124
Y + I G+ V++E T L+ ++VA+K +P S + +L + ++ +LL
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLL--------- 61
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-------------MIAAQL 171
A PN +F + L L ++ PS++ +L M A Q+
Sbjct: 62 ---AGCTGIPNVYYFGQ----EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQM 114
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDR------NLCPHLADFGLAE-YRENLKEISLKNWR 224
+Q +H +V+RD+KP N L+ R N+ ++ DFG+ + YR+ + + + +R
Sbjct: 115 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMI-YVVDFGMVKFYRDPVTKQHIP-YR 172
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRA 283
KKN+ GT YM+ S + D+ + G L G +P+ L+A
Sbjct: 173 E---------KKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 222
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 50/239 (20%)
Query: 68 YTLLSPIARGAESVVYEAT--LDGRKVAVK-KPILSTSEELDNFHKELQLLCKLDHPGLA 124
Y + I G+ V++E T L+ ++VA+K +P S + +L + ++ +LL
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLL--------- 62
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAEKLHVEEWSPSVDQVL-------------MIAAQL 171
A PN +F + L L ++ PS++ +L M A Q+
Sbjct: 63 ---AGCTGIPNVYYFGQ----EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQM 115
Query: 172 AKALQYLHNLGIVHRDVKPANVLLDR------NLCPHLADFGLAE-YRENLKEISLKNWR 224
+Q +H +V+RD+KP N L+ R N+ ++ DFG+ + YR+ + + + +R
Sbjct: 116 LARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMI-YVVDFGMVKFYRDPVTKQHIP-YR 173
Query: 225 SSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPYTDLRA 283
KKN+ GT YM+ S + D+ + G L G +P+ L+A
Sbjct: 174 E---------KKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 223
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 160 SVDQVLMIAAQLAKALQYLHNLGIVHRDVKPANVLLD---RNLCPHLADFGLA-EYRENL 215
S+ VLM+A Q+ ++++H+ +HRD+KP N L+ R ++ DFGLA +YR+
Sbjct: 101 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160
Query: 216 KEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGV 275
+ +R + KN+ GT Y + S + D+ S G + L G
Sbjct: 161 THQHIP-YREN---------KNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGS 210
Query: 276 VPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSGGLRPILASLELGLPASILSLIQRCWDGN 335
+P+ L+A + ++ +E+++ ++ +L G P S C
Sbjct: 211 LPWQGLKAGTKKQKYEKI--SEKKVATSI---------EALCRGYPTEFASYFHYCRSLR 259
Query: 336 PHNRPSFS 343
++P +S
Sbjct: 260 FDDKPDYS 267
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 52/233 (22%)
Query: 80 SVVYEATLDGRKVAVKKPILSTSEELDNFHKELQLLCKLD-HPGLAKFVAAHAKPPNYMF 138
+VV++ + GR VAVK+ ++ D E++LL + D HP + ++ +
Sbjct: 30 TVVFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86
Query: 139 FFEF--------YESRNLA-EKLHVE-EWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDV 188
E ES+N++ E L ++ E++P + + Q+A + +LH+L I+HRD+
Sbjct: 87 ALELCNLNLQDLVESKNVSDENLKLQKEYNP-----ISLLRQIASGVAHLHSLKIIHRDL 141
Query: 189 KPANVLLD-------------RNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHK 235
KP N+L+ NL ++DFGL + + SG+ +
Sbjct: 142 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD------------SGQXXFRXNL 189
Query: 236 KNMVGTLIYMAPEILK-------KEIHSEKSDVYSFGISINELLT-GVVPYTD 280
N GT + APE+L+ K + D++S G +L+ G P+ D
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E + E+++L + H +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLA-------RVADPDHDHTGFLT------EYVA 189
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKV-AVKKPIL--STSEELDNFHKELQLLCKLDHPGLA 124
Y++L I G S V++ + +++ A+K L + ++ LD++ E+ L KL
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-D 116
Query: 125 KFVAAHAKPPNYMFFFEFYESRN------LAEKLHVEEWSPSVDQVLMIAAQLAKALQYL 178
K + + + + E N L +K ++ W + +A+ +
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKS-----YWKNMLEAVHTI 171
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H GIVH D+KPAN L+ + L DFG+A + T K +
Sbjct: 172 HQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQ--------------PDTTSVVKDSQ 216
Query: 239 VGTLIYMAPEILKKEIHSEKS-----------DVYSFGISINELLTGVVPYTDLRAE-AQ 286
VGT+ YM PE +K S ++ DV+S G + + G P+ + + ++
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 287 AHTVLEMNY 295
H +++ N+
Sbjct: 277 LHAIIDPNH 285
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKVAVKKPILSTSEELDNFHK---ELQLLCKLDHPGLA 124
YT LS I GA +V A + KV V +S E + E+++L H +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 125 KFVAAHAKPPNYMFFFEFYESRNLAE----KLHVEEWSPSVDQVLMIAAQLAKALQYLHN 180
+ + P + Y ++L E KL ++ S D + Q+ + L+Y+H+
Sbjct: 87 G-INDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 181 LGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVG 240
++HRD+KP+N+LL+ + DFGLA ++ + +G T V
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLA-------RVADPDHDHTGFLT------EYVA 191
Query: 241 TLIYMAPEI-LKKEIHSEKSDVYSFGISINELLTG 274
T Y APEI L + +++ D++S G + E+L+
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 138 FFFEFYESR------NLAEKLHVEEWSPSVDQVLMIAAQLAKALQYLHNLGIVHRDVKPA 191
F+ F + R ++ ++ H E SV + +A AL +LHN GI HRD+KP
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASV-----VVQDVASALDFLHNKGIAHRDLKPE 140
Query: 192 NVLLDR--NLCP-HLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNMVGTLIYMAPE 248
N+L + + P + DF L S P G+ YMAPE
Sbjct: 141 NILCEHPNQVSPVKICDFDLG---------SGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 249 IL-----KKEIHSEKSDVYSFGISINELLTGVVPYT 279
++ + I+ ++ D++S G+ + LL+G P+
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 68 YTLLSPIARGAESVVYEATLDGRKV-AVKKPIL--STSEELDNFHKELQLLCKLDHPGLA 124
Y++L I G S V++ + +++ A+K L + ++ LD++ E+ L KL
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-D 68
Query: 125 KFVAAHAKPPNYMFFFEFYESRN------LAEKLHVEEWSPSVDQVLMIAAQLAKALQYL 178
K + + + + E N L +K ++ W + +A+ +
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-----SYWKNMLEAVHTI 123
Query: 179 HNLGIVHRDVKPANVLLDRNLCPHLADFGLAEYRENLKEISLKNWRSSGKPTGGFHKKNM 238
H GIVH D+KPAN L+ + L DFG+A + T K +
Sbjct: 124 HQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQ--------------PDTTSVVKDSQ 168
Query: 239 VGTLIYMAPEILKKEIHSEKS-----------DVYSFGISINELLTGVVPYTDLRAE-AQ 286
VGT+ YM PE +K S ++ DV+S G + + G P+ + + ++
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 228
Query: 287 AHTVLEMNY 295
H +++ N+
Sbjct: 229 LHAIIDPNH 237
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 167 IAAQLAKALQYLHNLGIVHRDVKPANVLL---DRNLCPHLADFGLAEYRENLKEISLKNW 223
I + A+Q+LH+ I HRDVKP N+L +++ L DFG A
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA-------------- 159
Query: 224 RSSGKPTGGFHKKNMVGTLIYMAPEILKKEIHSEKSDVYSFGISINELLTGVVPY 278
K T + T Y+APE+L E + + D++S G+ + LL G P+
Sbjct: 160 ----KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,921,691
Number of Sequences: 62578
Number of extensions: 792251
Number of successful extensions: 4212
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1491
Number of HSP's gapped (non-prelim): 1311
length of query: 697
length of database: 14,973,337
effective HSP length: 106
effective length of query: 591
effective length of database: 8,340,069
effective search space: 4928980779
effective search space used: 4928980779
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)