Your job contains 1 sequence.
>005429
MSSSERMSSPPPPKQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQV
LGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV
SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD
ISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF
LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR
KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFE
PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV
DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR
RKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSI
SPQKQDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVG
SCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHE
ELELNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005429
(697 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer... 2133 6.9e-221 1
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ... 2074 3.3e-219 2
TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ... 1725 1.2e-177 1
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"... 1144 2.9e-118 2
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme... 1058 4.4e-109 2
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph... 1063 1.7e-107 1
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph... 1063 1.7e-107 1
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph... 1063 1.7e-107 1
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein... 1061 2.7e-107 1
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein... 1061 2.7e-107 1
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein... 1060 3.5e-107 1
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph... 1060 3.5e-107 1
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph... 1060 3.5e-107 1
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te... 1057 7.2e-107 1
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein... 1055 1.2e-106 1
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha... 1052 2.5e-106 1
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta... 1049 5.1e-106 1
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta... 1049 5.1e-106 1
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein... 1043 2.2e-105 1
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein... 1040 4.6e-105 1
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein... 1037 9.5e-105 1
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm... 1036 1.2e-104 1
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp... 1036 1.2e-104 1
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein... 1034 2.0e-104 1
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma... 1030 5.3e-104 1
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme... 1029 6.7e-104 1
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso... 965 1.1e-103 2
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein... 976 2.5e-100 2
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein... 976 3.2e-100 2
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha... 936 4.8e-94 1
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci... 936 4.8e-94 1
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1... 934 7.8e-94 1
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha... 934 7.8e-94 1
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd... 903 1.5e-90 1
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6... 903 1.5e-90 1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ... 902 1.9e-90 1
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica... 881 3.2e-88 1
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ... 881 3.2e-88 1
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s... 777 2.7e-86 2
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po... 729 8.2e-85 2
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA... 729 8.2e-85 2
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein... 809 1.4e-80 1
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species... 700 6.6e-77 2
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ... 707 8.9e-70 1
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm... 610 1.7e-59 1
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph... 550 3.8e-53 1
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph... 460 1.3e-43 1
UNIPROTKB|H7C3W0 - symbol:PAPOLG "Poly(A) polymerase gamm... 314 2.4e-27 1
UNIPROTKB|G3V3I9 - symbol:PAPOLA "Poly(A) polymerase alph... 299 1.0e-25 1
UNIPROTKB|F1NDP2 - symbol:PAPOLA "Uncharacterized protein... 207 9.0e-16 1
UNIPROTKB|G3V457 - symbol:PAPOLA "Poly(A) polymerase alph... 207 9.0e-16 1
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot... 223 1.6e-14 1
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein... 199 7.4e-13 1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm... 193 3.5e-12 1
>TAIR|locus:2134113 [details] [associations]
symbol:nPAP "nuclear poly(a) polymerase" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
"RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
Length = 765
Score = 2133 (755.9 bits), Expect = 6.9e-221, P = 6.9e-221
Identities = 408/576 (70%), Positives = 476/576 (82%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+TKP+S+AGP+ AD++RN ELEK+LV+ GLYESK++ +RE+VLGRI QI K WVK
Sbjct: 19 KSYGITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVK 78
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+LT+ RGY+DQMVEDANA+IFTFGSYRLGVHGPGADID LCVGPSYV+REEDFF ILH+I
Sbjct: 79 QLTQQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDI 138
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
LAEMEEVTEL PV DAHVPVMKFKF G+ IDLLYASIS LVV +DLDIS SVL +VDEP
Sbjct: 139 LAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEP 198
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVARV
Sbjct: 199 TVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARV 258
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E ELGF VWD RKN RD+ H MPII
Sbjct: 259 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPII 318
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYPCMNSSYNVS STLRVM +QFQ+GN I +E+ELNK WS+LFE Y+FFE+Y+NYLQ
Sbjct: 319 TPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQ 378
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
VDIVAA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDT++ HCAFFM
Sbjct: 379 VDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFM 438
Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
GLQR G QE QQFDIRG+V+EF+ +NMYMFWKPGM++ VSH+RR+Q+PP+VFP GY
Sbjct: 439 GLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGY 498
Query: 494 KR---TRHPRLASQQRSSENGNEYQTGSGL----KRKKDPESVD--QDGPEKRQSISPQK 544
+R +RH L +S E+G+ +GS + KRK D E +D + PEKR S+SPQ
Sbjct: 499 RRPRQSRHQNLPGG-KSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQS 557
Query: 545 QDSLSPDHLAPSSVRSGTGSNVEPVIPDKRVLNQEI 580
D +SP++ S++ +G PV +R ++EI
Sbjct: 558 LDIVSPEN---SAITTGW---TPPVCNLRRPPSEEI 587
>TAIR|locus:2043560 [details] [associations]
symbol:PAPS2 "poly(A) polymerase 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
Uniprot:O82312
Length = 800
Score = 2074 (735.1 bits), Expect = 3.3e-219, Sum P(2) = 3.3e-219
Identities = 398/558 (71%), Positives = 457/558 (81%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T+P+S+AGP+ AD++RN ELEKFLV+ GLYESKEE +RE+V+ RI QI K WVK
Sbjct: 21 KSYGITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVK 80
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+LTR RGY+DQMVEDANA+IFTFGSYRLGVHGP ADID LCVGPSYV+REEDFF +I
Sbjct: 81 QLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDI 140
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
LAEMEEVTELQPV DAHVPVMKFKF G+SIDLLYASIS LV+ +DLDIS+ SVL DVDE
Sbjct: 141 LAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQ 200
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
TVRSLNGCRVADQILKLVPN EHF TTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVAR+
Sbjct: 201 TVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARL 260
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQ YPNA+PSMLVSRFFRVYT WRWPNPVMLCAI+E +L F VWDPRKN RD+ H MPII
Sbjct: 261 CQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPII 320
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYPCMNSSYNVS STLRVM +QFQ+GNTIC+E+ELNK WS+LF+ Y+FFE+Y+NYLQ
Sbjct: 321 TPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQ 380
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
VD++AA+A+DLLAWKGWVESR RQLTL IERDT G L CHP P+EYVDTSK HCAFFM
Sbjct: 381 VDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFM 440
Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
GLQR G QE QQFDIRG+V+EF+ +NMYMFW+PGM++ VSH+RR+Q+P +VFP GY
Sbjct: 441 GLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGY 500
Query: 494 KRTRHPRLASQQRSSENGNEYQTGS-------GLKRKKDPESVDQ--DGPEKRQSISPQK 544
KR+R R SQQ E G+E GS KRK D E ++ + EKR S S
Sbjct: 501 KRSRQSRHQSQQ-CREPGDE-GVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHT 558
Query: 545 QDSLSPDHLAPSSVRSGT 562
D+ SPD + SGT
Sbjct: 559 LDAASPD--SSGITTSGT 574
Score = 66 (28.3 bits), Expect = 3.3e-219, Sum P(2) = 3.3e-219
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 643 LENRHLDGNGAFQDRVHEELELNAGLGSVLQSTSGIDSETVVQKPVMR 690
+ENR+L +G F+ + EEL+ N+ L + G SE++ Q +MR
Sbjct: 741 VENRNLHSDGLFKSGLPEELQSNSLLSGTGKLDDGARSESL-QNEMMR 787
Score = 37 (18.1 bits), Expect = 3.8e-216, Sum P(2) = 3.8e-216
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 526 PESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTG 563
P ++D E R S S P+ L +S+ SGTG
Sbjct: 734 PANLDS-AVENRNLHSDGLFKSGLPEELQSNSLLSGTG 770
>TAIR|locus:2030943 [details] [associations]
symbol:PAPS1 "poly(A) polymerase 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
Length = 713
Score = 1725 (612.3 bits), Expect = 1.2e-177, P = 1.2e-177
Identities = 318/501 (63%), Positives = 390/501 (77%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
+++GV++PISM GPTE D+ + RELEK L + GLYESKEE +RE+VLG + QI K W+K
Sbjct: 9 QRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTWIK 68
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
++R +G +DQ++ +ANA IFTFGSYRLGVHGPGADID LCVGP + +RE DFF L +
Sbjct: 69 TISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRM 128
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L+EM EVTEL PV DAHVP+M FK +G+SIDLLYA + V+ EDLD+S S+L + DE
Sbjct: 129 LSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADEQ 188
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
TVRSLNGCRV DQIL+LVPN+++F TTLRC++FWAKRRGVYSNV+GFLGG+NWALLVAR+
Sbjct: 189 TVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARI 248
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+P++LVSRFFRV+ W WPN + LC+ DE LG VWDPR N +D+ H MPII
Sbjct: 249 CQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPII 308
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYPCMNSSYNVS STLR+M +FQ GN ICE +E NKA W LFEP+ FFE+Y+NYLQ
Sbjct: 309 TPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQ 368
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFM 433
+DI AAN DDL WKGWVESRLRQLTL IER + L CHP+PH++ DTS+P HC++FM
Sbjct: 369 IDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPL-HCSYFM 426
Query: 434 GLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGY 493
GLQRK G EG+QFDIR +VEEFK ++N Y W PGMEI V HI+R+ +P +VFP G
Sbjct: 427 GLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGV 486
Query: 494 KRTRHPRLAS--QQRSSENGN 512
R H + R SE+ N
Sbjct: 487 -RPSHTSKGTWDSNRRSEHRN 506
>DICTYBASE|DDB_G0288259 [details] [associations]
symbol:papA "poly(A) polymerase" species:44689
"Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
Length = 809
Score = 1144 (407.8 bits), Expect = 2.9e-118, Sum P(2) = 2.9e-118
Identities = 234/524 (44%), Positives = 324/524 (61%)
Query: 17 GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
GVT+PIS A P+ D + + ELE L+ L+ES EE KRE++LG++ QI ++W K+++
Sbjct: 54 GVTEPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWAKQVS 113
Query: 77 RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
+GY +Q + A IFTFGSYRLGVHGPG+DID LCVGP ++ R DFF L +IL
Sbjct: 114 LKKGYPEQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMRS-DFFDDLSDILKV 172
Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDVDEPTV 195
E+TE V DA VPV+ F G+ IDL+YA ++ + E+L D+ D S L ++DE ++
Sbjct: 173 HPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSI 232
Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
SLNGCRV DQILKLVPN+ +F LRC+K WA RRG+YSN+ GFLGGV+WALL AR+CQ
Sbjct: 233 LSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQ 292
Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE-LGFSVWDPRKNRRDKTHHMPIIT 314
LYPN+ PS ++ RFF+VY +W+WP P++LC I E LG VW+P+ RDK H MPIIT
Sbjct: 293 LYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPK---RDKAHLMPIIT 349
Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
PAYP MNS+YNVS STL++M +F G I ++E + W L E FF Y Y+++
Sbjct: 350 PAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFYIEI 409
Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDT----SKPCAHC- 429
D + N +D W+GW+ES+LR L +E K PYP + + + P C
Sbjct: 410 DCYSMNEEDSRKWEGWIESKLRFLISNLESTPKMKFAV-PYPKGFTNNLHKANNPDQICT 468
Query: 430 AFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPG---MEICVSHIRRKQIPP 486
+FFMGL + D+ +V EF I ++ +P M+I V +I++KQ+P
Sbjct: 469 SFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPA 528
Query: 487 YVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVD 530
+V EG P +++RSS G T LK + ++
Sbjct: 529 FVKDEG---PEEPVKTTKKRSS-TGEPSATRKKLKSENSDNKLN 568
Score = 41 (19.5 bits), Expect = 2.9e-118, Sum P(2) = 2.9e-118
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 520 LKRKKDPESVDQDGPEKRQSISPQKQDSLSP 550
+K+K+ P V +GPE+ + ++ + P
Sbjct: 521 IKKKQLPAFVKDEGPEEPVKTTKKRSSTGEP 551
>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
symbol:papolg "poly(A) polymerase gamma"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
Length = 744
Score = 1058 (377.5 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 221/506 (43%), Positives = 313/506 (61%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T IS+A P E D ++L + + G++E ++E R VLG++ K+W+
Sbjct: 19 KHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFVKEWIS 78
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + V + IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 79 EISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFFEK 137
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L +E+ +L+ V DA VPV+KFKFDG+ IDLL+A ++ + ++LD+ S+L ++D
Sbjct: 138 LKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIR 197
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 257
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNAV + LV +FF V++ W WPNPV+L +++ L VWDPR N D+ H MPII
Sbjct: 258 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 317
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST +M ++F+ G T+ +E+ KA WS LFEP FF+ YR+Y+
Sbjct: 318 TPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIV 377
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
+ A+ ++ L W G VES++R L +ER+ Y L H P + + + F
Sbjct: 378 LTASASTEENHLEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRNENDFVS 436
Query: 432 --FMGLQRKP---GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIP 485
F+G+ K + V +DI+ + ++ + N+ M K GM I +H+++KQ+
Sbjct: 437 MWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINML-KDGMTIEATHVKKKQLH 495
Query: 486 PYVFPEGYKRTRHPRLASQQRSSENG 511
Y+ PE +R + L RSS G
Sbjct: 496 HYLPPELVQRKKKS-LGDINRSSNGG 520
Score = 40 (19.1 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 494 KRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPE 535
KR P L + ++ + S K P S DG E
Sbjct: 647 KRPHSPSLEDPPKRHKDTEVFSDDSAFKEPYPPSSNGLDGDE 688
>UNIPROTKB|G3MYA2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
Length = 718
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 233/585 (39%), Positives = 340/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 434
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 435 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 492
Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSI 540
+ + P H L +++ S G + S L D + S+ P
Sbjct: 493 LHQ-LLPS------HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKT 544
Query: 541 SPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 545 SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|P25500 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
"magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
Uniprot:P25500
Length = 739
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 233/585 (39%), Positives = 340/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 434
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 435 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 492
Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSI 540
+ + P H L +++ S G + S L D + S+ P
Sbjct: 493 LHQ-LLPS------HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKT 544
Query: 541 SPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 545 SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|Q3T0A2 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
Length = 693
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 233/585 (39%), Positives = 340/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 434
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 435 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 492
Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSI 540
+ + P H L +++ S G + S L D + S+ P
Sbjct: 493 LHQ-LLPS------HV-LQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKT 544
Query: 541 SPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 545 SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSLPQINSSESSGG 589
>UNIPROTKB|F1SAQ7 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:CT827800
Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
Length = 693
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 233/585 (39%), Positives = 340/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 434
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 435 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 492
Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSI 540
+ + P H L +++ S +G S L D + S+ P
Sbjct: 493 LHQ-LLPN------HV-LQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKT 544
Query: 541 SPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 545 SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>UNIPROTKB|I3L6F0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
Length = 734
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 233/585 (39%), Positives = 340/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 34 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 93
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 94 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 152
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 153 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 212
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 213 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 272
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 273 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 332
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 333 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 392
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 393 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 450
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 451 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 508
Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQ--TGSGLKRKKDPE-SVDQDGPEKRQSI 540
+ + P H L +++ S +G S L D + S+ P
Sbjct: 509 LHQ-LLPN------HV-LQKKKKHSTDGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKT 560
Query: 541 SPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 561 SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 605
>UNIPROTKB|F1NKG9 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
Length = 737
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 222/510 (43%), Positives = 315/510 (61%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 17 KHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF +
Sbjct: 77 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 136 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 256 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 316 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 376 LLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE--YR 433
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 434 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAARHVKRKQ 491
Query: 484 I----PPYVFPEGYKR-TRHPRLASQQRSS 508
+ P +V + K T RL + SS
Sbjct: 492 LHQLLPNHVLQKKKKHSTEGVRLTALNDSS 521
>UNIPROTKB|G3XAH6 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
Length = 724
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 233/585 (39%), Positives = 340/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 434
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 435 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 492
Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQDGPEKRQSI 540
+ + P H L +++ S G + S L D + S+ P
Sbjct: 493 LHQ-LLPN------HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKT 544
Query: 541 SPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 545 SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>UNIPROTKB|P51003 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0030145 "manganese ion binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
Length = 745
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 233/585 (39%), Positives = 340/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 434
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 435 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 492
Query: 484 IPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQDGPEKRQSI 540
+ + P H L +++ S G + S L D + S+ P
Sbjct: 493 LHQ-LLPN------HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKT 544
Query: 541 SPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 545 SPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 589
>RGD|1310946 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
Uniprot:Q6AYH1
Length = 642
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 214/480 (44%), Positives = 307/480 (63%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
KQYG++ PIS+A P + D + ++L + L G++E +EE ++R +L ++ + K+W++
Sbjct: 19 KQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ R ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV+WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIV 377
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E VD +
Sbjct: 378 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE--FR 435
Query: 429 CAFFMGLQ-RKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
+ +GL +KP E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 436 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 494
>UNIPROTKB|F1PDS0 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
Uniprot:F1PDS0
Length = 745
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 222/510 (43%), Positives = 314/510 (61%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 24 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 83
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 84 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 142
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 143 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 202
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 203 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 262
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 263 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 322
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 323 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 382
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 383 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE--FR 440
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 441 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAMHVKRKQ 498
Query: 484 I----PPYVFPEGYKR-TRHPRLASQQRSS 508
+ P +V + K T RL SS
Sbjct: 499 LHQLLPNHVLQKKKKHSTEGVRLTPLNDSS 528
>MGI|MGI:109301 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
GermOnline:ENSMUSG00000021111 Uniprot:Q61183
Length = 739
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 218/499 (43%), Positives = 311/499 (62%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
+ YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 RHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE--FR 434
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVSHIRRKQ 483
+ +GL K E E D+ ++ F + +IN MF + M+I H++RKQ
Sbjct: 435 TMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-ELDMKIAAMHVKRKQ 492
Query: 484 I----PPYVFPEGYKRTRH 498
+ P +V KR +H
Sbjct: 493 LHQLLPSHVLQ---KRKKH 508
>UNIPROTKB|Q9NRJ5 [details] [associations]
symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
Length = 636
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 222/532 (41%), Positives = 324/532 (60%)
Query: 15 QYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKE 74
+YGV+ PIS+A P E D + L + L G++E +EE ++R VL ++ + K+W++E
Sbjct: 19 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 78
Query: 75 LTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL 134
++ + ++E+ IFTFGSYRLGVH GADIDALCV PS+V R DFF + L
Sbjct: 79 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137
Query: 135 AEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPT 194
EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 138 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197
Query: 195 VRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVC 254
+RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257
Query: 255 QLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIIT 314
QLYPNAV S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317
Query: 315 PAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQV 374
PAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+ +
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVL 377
Query: 375 DIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAHC 429
A+ L W G VES++R L +E++ + L Q P P E D +
Sbjct: 378 LASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMW 437
Query: 430 AFFMGLQRKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+GL +KP E++ +DI+ + ++ ++N MF + GM+I H+RRK++
Sbjct: 438 VIGLGL-KKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMF-EMGMKITAMHLRRKELHQ 495
Query: 487 YVFPEGYKRTRHPRLASQQRSSE-NGNEYQTGSGLKRKKD-PESVD--QDGP 534
+ P + + +R ++ N + + +G + P S + GP
Sbjct: 496 -LLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGP 546
>MGI|MGI:1932115 [details] [associations]
symbol:Papolb "poly (A) polymerase beta (testis specific)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
Uniprot:Q9WVP6
Length = 641
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 212/480 (44%), Positives = 306/480 (63%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
KQ+G++ PIS+A P + D + ++L + L G++E +EE ++R +L ++ + K+W++
Sbjct: 18 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ R ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN++ F TLR +K WAK +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I E+ LNKA+WS LFE FF+ Y++Y+
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIV 376
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 377 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE--FR 434
Query: 429 CAFFMGLQ-RKP--GEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI 484
+ +GL +KP E++ +DI+ + ++ +IN MF + M+I H+RRK++
Sbjct: 435 TMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAINSKMF-EMDMKIAAMHLRRKEL 493
>UNIPROTKB|A5D7N5 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
Length = 740
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 228/567 (40%), Positives = 324/567 (57%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + G++E +EE R VLG++ + K+W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + +V IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + + L+ V DA VPV+KF+FDG+ IDL++A ++ + E+LD+ D S L +D
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA 430
+ A+ ++ L W G VES++R L +ER+ + L H P + K + +
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 434
Query: 431 -FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+F+G+ +R + E V +DI+ + N K GM+I +H+++KQ+
Sbjct: 435 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 494
Query: 487 YVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQD 546
Y+ E ++ + L+ RSS ++ D + P +S K
Sbjct: 495 YLPAEILQKKKKQSLSDVTRSSSGPQSKRSSLDSNCLDSSRDTDNETPFN-SPVSANKPS 553
Query: 547 SLSPDHLAPSSVRSGTGSNVEPVIPDK 573
PD + PS + VI +K
Sbjct: 554 K--PD-IPPSGETERNNAEPAAVIVEK 577
>UNIPROTKB|I3LRR6 [details] [associations]
symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
Length = 636
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 231/585 (39%), Positives = 342/585 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K+YG++ PIS+A P E D ++L + L G++E +EE ++R +L ++ + K+W++
Sbjct: 32 KRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIR 91
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
EL+ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 92 ELSESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 150
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 151 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 210
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAK +YSN+ GFLGGV+WA+LVAR
Sbjct: 211 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVART 270
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 271 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 330
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST VM+++F+ G I E+ L+KA+WS LFE FF+ Y++Y+
Sbjct: 331 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIA 390
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 391 LLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEEFRTM 450
Query: 429 CAFFMGLQR-KPGEVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQI-- 484
+ L+R + +++ +DI+ + ++ ++N MF + M+I H+RRK++
Sbjct: 451 WVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMF-EMDMKIAAMHLRRKELHQ 509
Query: 485 --PPYVFPEGYKRTRHPRLASQQRSSENGNEYQ---TGSGLKRKKDPESVDQDGPEKRQS 539
P +V P+ K+T S SS G TGS R P P
Sbjct: 510 LLPNHVLPQ--KKTPSHSEDSVSVSSFPGAVKTGPVTGSSPGRSS-PALAMMAAPVISAQ 566
Query: 540 ISPQKQDSLSPDHLAPSSVRSGT---GSNVEPVIPDKRVLNQEIA 581
++ +P +P S S + ++ ++P K V+ + I+
Sbjct: 567 VTDVSLQQANPSE-SPGSASSESIPHAGSLPAILPPKPVVTRVIS 610
>UNIPROTKB|F1SQL7 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
Length = 741
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 231/569 (40%), Positives = 330/569 (57%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + G++E +EE R VLG++ + K+W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + +V IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + + L+ V DA VPV+KF+FDG+ IDL++A ++ + ++LD+ D S L +D
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA 430
+ A+ ++ L W G VES++R L +ER+ + L H P + K + +
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 434
Query: 431 -FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+F+G+ +R + E V +DI+ + N K GM+I +H+++KQ+
Sbjct: 435 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 494
Query: 487 YVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQD 546
Y+ E ++ + L+ RSS +G + + S D +G +S K
Sbjct: 495 YLPAEILQKKKKQSLSDVTRSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSANKPS 553
Query: 547 SLSPDHLAPSSVRSGTGSNVEP--VIPDK 573
PD + P + +N EP VI +K
Sbjct: 554 K--PD-IPP--LGETERNNTEPTAVIVEK 577
>UNIPROTKB|Q9BWT3 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
Length = 736
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 230/577 (39%), Positives = 335/577 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + G++E +EE R VLG++ + K+W+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+++ + +V IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + + L+ V DA VPV+KF+FDG+ IDL++A ++ + ++LD+ D S L +D
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA 430
+ A+ ++ L W G VES++R L +ER+ + L H P + K + +
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 434
Query: 431 -FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+F+G+ +R + E V +DI+ + N K GM+I +H+++KQ+
Sbjct: 435 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 494
Query: 487 YVFPEGYKRTRHPRLASQQRSS---ENGNEYQTGSGLKRKKDPES-VDQDGPEKRQ---S 539
Y+ E ++ + L+ RSS ++ S L +D ++ + P + S
Sbjct: 495 YLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPS 554
Query: 540 ISPQKQDSLSPDHLA---PSSVRSGTGSNVEPVIPDK 573
+ +++S P + P SV G ++ PVI K
Sbjct: 555 VGETERNSAEPAAVIVEKPLSVPPAQGLSI-PVIGAK 590
>RGD|1310337 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
Uniprot:D3ZAN6
Length = 739
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 237/574 (41%), Positives = 335/574 (58%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + G++E +EE R VLG++ + K+W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+++ + +V IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + V L+ V DA VPV+KF+FDG+ IDL++A ++ + ++LD+ D S L +D
Sbjct: 136 LKHQDGVRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA 430
+ A+ ++ L W G VES++R L +ER+ + L H P + K + +
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVS 434
Query: 431 -FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+F+G+ +R + E V +DI+ + N K GM+I +H+++KQ+
Sbjct: 435 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHH 494
Query: 487 YVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEK-RQSISPQKQ 545
Y+ P + + L+ RSS GL+ K+ S+D + + R + S
Sbjct: 495 YL-PAEILQKKKKSLSDVSRSS---------GGLQSKRS--SLDSNCLDSSRDTDSGTPF 542
Query: 546 DSLSPDHLAPSSVRSGTG----SNVEP--VIPDK 573
+S H PS+ S TG SN EP VI +K
Sbjct: 543 NSPGSAH-KPSNPDSPTGDAERSNAEPMAVIVEK 575
>UNIPROTKB|J9NS30 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
Length = 813
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 227/567 (40%), Positives = 327/567 (57%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + G++E +EE R VLG++ + K+W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+++ + +V IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + + L+ V DA VPV+KF+FDG+ IDL++A ++ + ++LD+ D S L +D
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV ++IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA 430
+ A+ ++ L W G VES++R L +ER+ + L H P + K + +
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVS 434
Query: 431 -FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+F+G+ +R + E V +DI+ + N K GM+I +H+++KQ+
Sbjct: 435 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 494
Query: 487 YVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQD 546
Y+ E ++ + L+ RSS +G + + S D +G +S K
Sbjct: 495 YLPAEILQKKKKQSLSDVSRSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSINKPS 553
Query: 547 SLSPDHLAPSSVRSGTGSNVEPVIPDK 573
PD L PS + V+ +K
Sbjct: 554 K--PD-LPPSGETERNNAEPTAVVVEK 577
>MGI|MGI:2442119 [details] [associations]
symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
Length = 739
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 231/564 (40%), Positives = 324/564 (57%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + G++E +EE R VLG++ + K+W+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+++ + +V IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + + L+ V DA VPV+KF+FDG+ IDL++A ++ + ++LD+ D S L +D
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA S LV +FF V++ W WPNPV+L +E+ L VWDPR N D+ H MPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA 430
+ A+ ++ L W G VES++R L +ER+ + L H P + K + +
Sbjct: 376 LTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVS 434
Query: 431 -FFMGL--QR-KPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+F+G+ +R + E V +DI+ + N K GM+I +H+++KQ+
Sbjct: 435 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHH 494
Query: 487 YVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQD-GPEKRQSISPQKQ 545
Y+ P + + L+ RSS G S L S D D G +S K
Sbjct: 495 YL-PAEILQKKKKSLSDVSRSS--GGLQSKRSSLDSTCLDSSRDTDSGTPFNSPVSANKP 551
Query: 546 DSLSPDHLAPSSVRSGTGSNVEPV 569
+ PD RS + EPV
Sbjct: 552 SN--PDSPTGEIERS----SAEPV 569
>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
symbol:papola "poly(A) polymerase alpha"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
[GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
NextBio:20817515 Uniprot:Q5SNY2
Length = 723
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 214/507 (42%), Positives = 309/507 (60%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P EAD+ R+L + L G++E + E ++R VLG++ + K W++
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + +++ IFTFGSYRLGVH GADIDALCV P +V R DFF +
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L E EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + E+LD+ D +L ++D
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+E+F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNAV + LV +FF V++ W WPNPV+L ++ L VWDPR D+ H MPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVS ST +M+++F+ G I +E+ NKA WS LFE FF+ Y++Y+
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDTSKPCAH 428
+ A L W G VES++R L +E++ + L Q P P E D +
Sbjct: 376 LLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEEFSTM 435
Query: 429 CAFFMGLQRKPG-EVVQEGQQFDIRGSVEE-FKLSINMYMFWKPGMEICVSHIRRKQIPP 486
+ ++ G E + FDI+ + ++ +I MF + M+I H++RKQ+
Sbjct: 436 WVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMF-EQDMKITAMHVKRKQLHQ 494
Query: 487 YVFPE-GYKRTRHPRLASQQRSSENGN 512
+ PE R++ + R+ + N
Sbjct: 495 -LLPEVAIHRSKRKHSSDGVRAMNDSN 520
>FB|FBgn0015949 [details] [associations]
symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
Length = 659
Score = 965 (344.8 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 188/403 (46%), Positives = 258/403 (64%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
KQ G+T IS+A P D+QR EL L ++ES++E R ++L ++ + K WVK
Sbjct: 26 KQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVK 85
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + + E I+TFGSYRLGVH GADIDALCV P + R D+F +
Sbjct: 86 EISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEV 144
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L + EVTE + V +A VPV+K FDG+ IDLL+A +S + +D D+ D ++L ++D
Sbjct: 145 LKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHR 204
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+VRSLNGCRV D+IL LVPN+E+F LR +K WAK+ G+YSN G+ GGV WA+LVAR
Sbjct: 205 SVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVART 264
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA + LV +FF V++ W+WPNPV+L D L F VWDPR N D+ H MPII
Sbjct: 265 CQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPII 324
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS++NVS ST +V++ +F G I +E+ L + W LFE FF YR+++
Sbjct: 325 TPAYPQQNSTFNVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIV 384
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYP 416
+ + + ADD L W G VES++R L +ER+ + L H P
Sbjct: 385 LLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIAL-AHVNP 426
Score = 82 (33.9 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 422 TSKPCAHCA-FFMGLQRKPGEVVQEGQQFDIRGSVEEFKL-SINMYMFWKPGMEICVSHI 479
TS P C+ +F+GL+ + E + I+ E + +N+ M K GM I H+
Sbjct: 461 TSAP--FCSMWFIGLEFERSENLNVDLTESIQNFTEHVMMHGVNIKML-KEGMTIDARHV 517
Query: 480 RRKQIPPYVFPEGYKRTRHPRLASQQRSSEN--GNEYQTGSGLKRKKDPESVDQD---GP 534
+RKQ+ Y+ + KR R + S + N + + L + +DP Q G
Sbjct: 518 KRKQLSLYLDSDFLKRERKS-MESHNNFNNTLLANRKRLSTELAQSQDPLPPGQQPSSGN 576
Query: 535 EKRQSISP-QK-QDSLSPDHLAPSSVRSGTGSNVEP 568
R S + Q+ DSL+ ++ SS G G+ P
Sbjct: 577 RGRDSGAKIQRLSDSLTEENSNASS-DMGAGTPTTP 611
>UNIPROTKB|F1NL95 [details] [associations]
symbol:F1NL95 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
"chloramphenicol O-acetyltransferase activity" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=IBA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
Length = 748
Score = 976 (348.6 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 194/449 (43%), Positives = 277/449 (61%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
+ YG+T PIS+A P + D ++L + + G++E +EE R VL ++ + K+W+
Sbjct: 17 RHYGITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIF 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
EL + +VE+ IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 ELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EE+ L+ V DA+VPV+KF+FDG+ IDL++A + V ++LD+ D S L +D
Sbjct: 136 LKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQL+PNA+ S LV +FF +++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 256 CQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST V++++ ++G + E+ ++ W LFE FF+ Y++Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
+ + L W G VES++R L +ER+ + + H P + + C +
Sbjct: 376 LTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRYVS 434
Query: 432 --FMGLQRKPGEVVQEGQQFDIRGSVEEF 458
F+G+ + E E + D+ ++ F
Sbjct: 435 MWFLGIIFRKLESA-ESTKIDLTYDIQSF 462
Score = 39 (18.8 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 512 NEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLS 549
N Q SGL+ K+ + + S +P SLS
Sbjct: 512 NISQNASGLRCKRASSNESLNSSRDNHSRTPYNSSSLS 549
>UNIPROTKB|F1P3A1 [details] [associations]
symbol:F1P3A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR001707
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
Length = 738
Score = 976 (348.6 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 194/449 (43%), Positives = 277/449 (61%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
+ YG+T PIS+A P + D ++L + + G++E +EE R VL ++ + K+W+
Sbjct: 17 RHYGITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIF 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
EL + +VE+ IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 77 ELGESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EE+ L+ V DA+VPV+KF+FDG+ IDL++A + V ++LD+ D S L +D
Sbjct: 136 LKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIR 195
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN E+F TLR +K WAKRRG+YSN+ GFLGGV+WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQL+PNA+ S LV +FF +++ W WPNPV+L +E L VWDPR N D+ H MPII
Sbjct: 256 CQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPII 315
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP NS+YNVSTST V++++ ++G + E+ ++ W LFE FF+ Y++Y+
Sbjct: 316 TPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIV 375
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF-- 431
+ + L W G VES++R L +ER+ + + H P + + C +
Sbjct: 376 LTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINI-AHVNPQSFPGNQEHCKQSRYVS 434
Query: 432 --FMGLQRKPGEVVQEGQQFDIRGSVEEF 458
F+G+ + E E + D+ ++ F
Sbjct: 435 MWFLGIIFRKLESA-ESTKIDLTYDIQSF 462
Score = 38 (18.4 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 512 NEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNVE 567
N Q SGL+ K+ + + S +P SL + + R+ +N E
Sbjct: 512 NISQNASGLRCKRASSNESLNSSRDNHSRTPYNSSSLRSESKNATIWRTNGANNRE 567
>WB|WBGene00011791 [details] [associations]
symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 193/453 (42%), Positives = 284/453 (62%)
Query: 16 YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
+GV++PIS A P D+ L+ L E +ESK+E R +VL + + KDWV++
Sbjct: 14 FGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKT 73
Query: 76 TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
T R DQM LI FGSYRLGVH GADID++ V P +++R DFF +ILA
Sbjct: 74 TISRIPKDQMFNAGGKLI-PFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNSFKDILA 131
Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
+ EVTEL V A VP+M K+ G+ ID+L+A ++ V EDL+I D S+L ++DE +V
Sbjct: 132 KNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESV 191
Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
RSLNGCRVA+Q+LKLVP+ ++FC TLR +K WAK G+YSN GF GG+ WA+LVAR+CQ
Sbjct: 192 RSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQ 251
Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVML----C-AIDEAELGFSVWDPRKNRRDKTHHM 310
LYPNA PS L+ + F +++ W WP PV+L C D A+L VWDPR+N D+ H M
Sbjct: 252 LYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLM 311
Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
PIITPA+P NS++NVS S+++V+ D+ + IC+++ +W L E FF Y +
Sbjct: 312 PIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHH 371
Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 430
++ + + A + + LA+ G+ ESR+RQL ++E++ ++ P ++ D P
Sbjct: 372 FIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDVKDP-KKSI 429
Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
+F+GL E V + D+ +++FK++I+
Sbjct: 430 WFIGL-----EFVANVKNVDLTSDIQQFKMNID 457
>UNIPROTKB|Q09995 [details] [associations]
symbol:T15H9.6 "Protein T15H9.6" species:6239
"Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
Length = 554
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 193/453 (42%), Positives = 284/453 (62%)
Query: 16 YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
+GV++PIS A P D+ L+ L E +ESK+E R +VL + + KDWV++
Sbjct: 14 FGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKT 73
Query: 76 TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
T R DQM LI FGSYRLGVH GADID++ V P +++R DFF +ILA
Sbjct: 74 TISRIPKDQMFNAGGKLI-PFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNSFKDILA 131
Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
+ EVTEL V A VP+M K+ G+ ID+L+A ++ V EDL+I D S+L ++DE +V
Sbjct: 132 KNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDEESV 191
Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
RSLNGCRVA+Q+LKLVP+ ++FC TLR +K WAK G+YSN GF GG+ WA+LVAR+CQ
Sbjct: 192 RSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARICQ 251
Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVML----C-AIDEAELGFSVWDPRKNRRDKTHHM 310
LYPNA PS L+ + F +++ W WP PV+L C D A+L VWDPR+N D+ H M
Sbjct: 252 LYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLM 311
Query: 311 PIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRN 370
PIITPA+P NS++NVS S+++V+ D+ + IC+++ +W L E FF Y +
Sbjct: 312 PIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHH 371
Query: 371 YLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA 430
++ + + A + + LA+ G+ ESR+RQL ++E++ ++ P ++ D P
Sbjct: 372 FIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDVKDP-KKSI 429
Query: 431 FFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
+F+GL E V + D+ +++FK++I+
Sbjct: 430 WFIGL-----EFVANVKNVDLTSDIQQFKMNID 457
>POMBASE|SPBC646.04 [details] [associations]
symbol:pla1 "poly(A) polymerase Pla1" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
Uniprot:Q10295
Length = 566
Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
Identities = 182/390 (46%), Positives = 260/390 (66%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
KQ+G+T PIS A TE + N L L L+ES E EKR +VL ++QI ++VK
Sbjct: 4 KQWGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVK 63
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+++ + +++M +A IFT+GSYRLGV+GPG+DID L V P +VSR+ +FF L +
Sbjct: 64 KVSLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRD-NFFQDLEPM 122
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L E EEVT+L V DA+VP++KFKF G+SIDL++A +S V DL++SD ++L V+E
Sbjct: 123 LREREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEER 182
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
V SLNG RV DQIL+LVPN F LR +KFWA+RR +Y+NV GF GGV WA++VAR+
Sbjct: 183 CVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARI 242
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNAV S++V++FFR+ W WP P++L I++ L +W+P+ DK H MPII
Sbjct: 243 CQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPII 302
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP M +++N++ ST +++ + I +++ + WSALF+ + FF Y++YL
Sbjct: 303 TPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLT 362
Query: 374 VDIVAANADDLLAWKGWVESRLRQLTLMIE 403
+ A A+ L W G VES+LR L +E
Sbjct: 363 ITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392
>WB|WBGene00009658 [details] [associations]
symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
Length = 554
Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
Identities = 187/455 (41%), Positives = 282/455 (61%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
+ +GV++PIS A P D++ L+K L + YE +EE +R +VL ++ K W++
Sbjct: 17 RTFGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQ 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
++T R DQ+ +A + FGSYRLGVH GADID L + P + +R DFF +
Sbjct: 77 KITEARYPKDQLF-NAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSFKQM 134
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
LA+ EVT L V +A VP+M K+ G+ ID L+A ++ V EDLDI D ++L ++D+
Sbjct: 135 LAKDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQE 194
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+VRSLNGCRVA+ +LKLVPN E+FC TLR +K WAK G+YSN GF GG+ WA+LVAR
Sbjct: 195 SVRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARA 254
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTH 308
CQLYPNA PS L+ + F +++ W+WP PV+L I D A+L VWDPR+N+ D+ H
Sbjct: 255 CQLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYH 314
Query: 309 HMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESY 368
MPI+TPA+P NS++NVS S+++V+ ++ + C+ ++ W L E FF Y
Sbjct: 315 LMPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRY 374
Query: 369 RNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAH 428
++++ + + A D LA+ G+ ESR+RQL L++E++ KL H P ++ P
Sbjct: 375 KHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDP-KK 432
Query: 429 CAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSIN 463
+F+GLQ + + D+ +++FK +I+
Sbjct: 433 SVWFIGLQFD-----ENVKNLDLTKDIQQFKRNID 462
>WB|WBGene00012528 [details] [associations]
symbol:pap-1 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 187/460 (40%), Positives = 283/460 (61%)
Query: 17 GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
GV++PIS+A P D+ + L + L + G YE KEE E+R +VL + ++ K+WVK +T
Sbjct: 13 GVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVT 72
Query: 77 RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
++ + + V +A +FTFGSYRLGVH GADID L V P ++ R DFF +L
Sbjct: 73 AMKIPNGEGV-NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNN 130
Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
VTEL V +A VPVMK K+ G+ +D+L+A ++ V + ++SD ++L ++D+ +VR
Sbjct: 131 DPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVR 190
Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
SLNGCRVA+Q+LKLVP + FC TLR +K WAK G+YSN GF GG+ WA+LVAR CQL
Sbjct: 191 SLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQL 250
Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMP 311
YPNA PS LV R F +++ W WP+PV+L + D L VWDPR+ D+ H MP
Sbjct: 251 YPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMP 310
Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
IITPA+P NS++NV+ ST V+ ++ IC ++ K++W+ALFE FF Y+++
Sbjct: 311 IITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHF 370
Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
+ + + A N ++ L + G++ESR+R L +ER+ + H P+++ KP + F
Sbjct: 371 IALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQ-DIIIAHNDPNKH----KPSPNAKF 425
Query: 432 FMGLQRKP------G-EVVQEGQQFDIRGSVEEFKLSINM 464
+ + K G E + + D+ ++ FK ++ +
Sbjct: 426 DVNPENKRVTVWFIGLEFAEHAKTLDLTNEIQRFKTNVEL 465
>UNIPROTKB|Q9U2P3 [details] [associations]
symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
Length = 655
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 187/460 (40%), Positives = 283/460 (61%)
Query: 17 GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
GV++PIS+A P D+ + L + L + G YE KEE E+R +VL + ++ K+WVK +T
Sbjct: 13 GVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNVT 72
Query: 77 RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
++ + + V +A +FTFGSYRLGVH GADID L V P ++ R DFF +L
Sbjct: 73 AMKIPNGEGV-NAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNN 130
Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVR 196
VTEL V +A VPVMK K+ G+ +D+L+A ++ V + ++SD ++L ++D+ +VR
Sbjct: 131 DPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVR 190
Query: 197 SLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 256
SLNGCRVA+Q+LKLVP + FC TLR +K WAK G+YSN GF GG+ WA+LVAR CQL
Sbjct: 191 SLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQL 250
Query: 257 YPNAVPSMLVSRFFRVYTMWRWPNPVMLCAI-----DEAELGFSVWDPRKNRRDKTHHMP 311
YPNA PS LV R F +++ W WP+PV+L + D L VWDPR+ D+ H MP
Sbjct: 251 YPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMP 310
Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNY 371
IITPA+P NS++NV+ ST V+ ++ IC ++ K++W+ALFE FF Y+++
Sbjct: 311 IITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHF 370
Query: 372 LQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAF 431
+ + + A N ++ L + G++ESR+R L +ER+ + H P+++ KP + F
Sbjct: 371 IALIMAAPNEEEELNYGGFLESRIRLLVQSLERNQ-DIIIAHNDPNKH----KPSPNAKF 425
Query: 432 FMGLQRKP------G-EVVQEGQQFDIRGSVEEFKLSINM 464
+ + K G E + + D+ ++ FK ++ +
Sbjct: 426 DVNPENKRVTVWFIGLEFAEHAKTLDLTNEIQRFKTNVEL 465
>SGD|S000001710 [details] [associations]
symbol:PAP1 "Poly(A) polymerase, one of three factors
required for mRNA 3'-end pol" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
GermOnline:YKR002W Uniprot:P29468
Length = 568
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 177/414 (42%), Positives = 271/414 (65%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K +G+T P+S G T A+ + N L + L + G +E+++E R QVL ++++A+ +V
Sbjct: 5 KVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVY 64
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E+++ + SD M DA IFT+GSYRLGVHGPG+DID L V P +V+RE DFF + ++
Sbjct: 65 EVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSL 123
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L E +E+ E+ PV DA VP++K KF G+SIDL+ A + + V L +SD ++L ++DE
Sbjct: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+R+LNG RV D+IL+LVP F LR +K WA+RR VY+N+ GF GGV WA+LVAR+
Sbjct: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPII 313
CQLYPNA +++++RFF + + W WP PV+L I++ L VW+P+ +D++H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303
Query: 314 TPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQ 373
TPAYP M +++N++ ST +V++ +F G I ++ NK W+ LFE FF Y+ YL+
Sbjct: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363
Query: 374 VDIVAANADDL-LAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPC 426
+ +D+ L W G VES++R L + +E K+ HP+ + ++S C
Sbjct: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI-AHPFTKPF-ESSYCC 415
>CGD|CAL0002451 [details] [associations]
symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 177/403 (43%), Positives = 257/403 (63%)
Query: 16 YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
YGVT PIS+A T + + N L K L G +ES+ +KR +VL ++ + +++V ++
Sbjct: 6 YGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKV 65
Query: 76 TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
+ + S+ M D IFTFGSYRLGV+GPG+DID L V P +VSR DFF + + +L
Sbjct: 66 SIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLK 124
Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
E+ E+ PV DA VP++K +F G+SIDL++A + V DL + D ++L ++DE +
Sbjct: 125 GRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDL 184
Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
R+LNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV WA+LVAR+CQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244
Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
LYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR D+ H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITP 304
Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
AYP M +++N+++ST +V++ +FQ G + ++ + K WS L E + FF Y+ YL
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC-- 362
Query: 376 IVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
IVAA + L + G VES+LR L +E G HPY
Sbjct: 363 IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>UNIPROTKB|Q9UW26 [details] [associations]
symbol:PAPA "Poly(A) polymerase PAPa" species:237561
"Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
[GO:0044011 "single-species biofilm formation on inanimate
substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
Length = 555
Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
Identities = 177/403 (43%), Positives = 257/403 (63%)
Query: 16 YGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKEL 75
YGVT PIS+A T + + N L K L G +ES+ +KR +VL ++ + +++V ++
Sbjct: 6 YGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEFVYKV 65
Query: 76 TRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILA 135
+ + S+ M D IFTFGSYRLGV+GPG+DID L V P +VSR DFF + + +L
Sbjct: 66 SIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLK 124
Query: 136 EMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTV 195
E+ E+ PV DA VP++K +F G+SIDL++A + V DL + D ++L ++DE +
Sbjct: 125 GRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDL 184
Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
R+LNG RV D+IL+LVP F LRC+K WA++R VY N+ GF GGV WA+LVAR+CQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQ 244
Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITP 315
LYPNAV +++V +FF +Y+ W WP PV+L I++ L VW+PR D+ H MP+ITP
Sbjct: 245 LYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITP 304
Query: 316 AYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVD 375
AYP M +++N+++ST +V++ +FQ G + ++ + K WS L E + FF Y+ YL
Sbjct: 305 AYPSMCATHNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC-- 362
Query: 376 IVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKLQCHPY 415
IVAA + L + G VES+LR L +E G HPY
Sbjct: 363 IVAATRSTYAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPY 404
>RGD|1308673 [details] [associations]
symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
Uniprot:F1MAC5
Length = 681
Score = 777 (278.6 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 142/287 (49%), Positives = 199/287 (69%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
+ YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 RHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPR 300
CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
Score = 105 (42.0 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
Identities = 65/237 (27%), Positives = 101/237 (42%)
Query: 346 EEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANAD-DLLAWKGWVESRLRQLTLMIER 404
EE LN W LFF + +Q+ + +A + L W G VES++R L +E+
Sbjct: 291 EECNLNLPVWDPRVS-VLFFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEK 349
Query: 405 DTYGKL-----QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF- 458
+ + L Q P P E D + + +GL K E E D+ ++ F
Sbjct: 350 NEFITLAHVNPQSFPAPKESPDREE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFT 406
Query: 459 ----KLSINMYMFWKPGMEICVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSSE 509
+ +IN MF + M+I H++RKQ+ P +V + K T +LA+ SS
Sbjct: 407 DTVYRQAINSKMF-ELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSL 465
Query: 510 NGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNV 566
+ + S P S + P S S Q ++S +P A +SV S S V
Sbjct: 466 DLSMDSDNS--MSVPSPTSAMKTSP-LNSSGSSQGRNSPAPAVTA-ASVTSIQASEV 518
>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
symbol:PFF1240w "poly(A) polymerase PAP,
putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
polyadenylation" evidence=ISS] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 729 (261.7 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 142/338 (42%), Positives = 225/338 (66%)
Query: 17 GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
GVT+PIS+ P+E D++R+ ++ + L L+E + +KRE VLG I ++ +++ EL+
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 77 RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
+G S++ + + ++TFGSYRLGV P +DID + + P ++RE FF + L +
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTREI-FFNEFYLKLQQ 201
Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDVDEPTV 195
V +LQ + + + P+++F +D + IDLL A++ +++ + + +L ++DE TV
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261
Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
RSLNG RVAD IL VPN ++F TLR +K WAK RG+YSN+ GFLGG++WALL A++CQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321
Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMP 311
LYPN S L+ +FF+VY++W W PV+L I + + F VWDP KN +DK H MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381
Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 349
IITPA+PCMNS++NV+ T +++++F+ ++I + +E
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 139 (54.0 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 44/205 (21%), Positives = 91/205 (44%)
Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
M N+ +S + M++ N + + W + EP F +Y+++L + I+
Sbjct: 418 MEDENNIKSS---IRMNKLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGI 474
Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGL--- 435
N +WKGW+ES++R L +E T +L+ P+P Y + +C+ FF+ L
Sbjct: 475 NEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFF 532
Query: 436 QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWK-PG-MEICVSHIRRKQIPPYVFPEG 492
+ P E F++ ++ +F +++N K P +I + + +R Q+ ++
Sbjct: 533 YKNPYE-----NTFNLSYAIRDFIDIALNWPQKVKYPNAFKINIMYQKRSQVLEFLDIVT 587
Query: 493 YKRTRHPRLASQQRSSENGNEYQTG 517
+ + + + + N Q G
Sbjct: 588 KEENQKNKQVMENNDKDETNHNQNG 612
>UNIPROTKB|C6KT92 [details] [associations]
symbol:PFF1240w "Poly(A) polymerase PAP, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
Length = 631
Score = 729 (261.7 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 142/338 (42%), Positives = 225/338 (66%)
Query: 17 GVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELT 76
GVT+PIS+ P+E D++R+ ++ + L L+E + +KRE VLG I ++ +++ EL+
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 77 RLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAE 136
+G S++ + + ++TFGSYRLGV P +DID + + P ++RE FF + L +
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTREI-FFNEFYLKLQQ 201
Query: 137 MEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDL-DISDMSVLNDVDEPTV 195
V +LQ + + + P+++F +D + IDLL A++ +++ + + +L ++DE TV
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261
Query: 196 RSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQ 255
RSLNG RVAD IL VPN ++F TLR +K WAK RG+YSN+ GFLGG++WALL A++CQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321
Query: 256 LYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAEL----GFSVWDPRKNRRDKTHHMP 311
LYPN S L+ +FF+VY++W W PV+L I + + F VWDP KN +DK H MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381
Query: 312 IITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVE 349
IITPA+PCMNS++NV+ T +++++F+ ++I + +E
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME 419
Score = 139 (54.0 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 44/205 (21%), Positives = 91/205 (44%)
Query: 320 MNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAA 379
M N+ +S + M++ N + + W + EP F +Y+++L + I+
Sbjct: 418 MEDENNIKSS---IRMNKLWPNNNVNNINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGI 474
Query: 380 NADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCA-FFMGL--- 435
N +WKGW+ES++R L +E T +L+ P+P Y + +C+ FF+ L
Sbjct: 475 NEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFF 532
Query: 436 QRKPGEVVQEGQQFDIRGSVEEF-KLSINMYMFWK-PG-MEICVSHIRRKQIPPYVFPEG 492
+ P E F++ ++ +F +++N K P +I + + +R Q+ ++
Sbjct: 533 YKNPYE-----NTFNLSYAIRDFIDIALNWPQKVKYPNAFKINIMYQKRSQVLEFLDIVT 587
Query: 493 YKRTRHPRLASQQRSSENGNEYQTG 517
+ + + + + N Q G
Sbjct: 588 KEENQKNKQVMENNDKDETNHNQNG 612
>UNIPROTKB|F1NDP1 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
ArrayExpress:F1NDP1 Uniprot:F1NDP1
Length = 620
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 177/407 (43%), Positives = 247/407 (60%)
Query: 117 PSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVR 176
P +V R DFF + L + EEV +L+ V +A VPV+K FDG+ ID+L+A ++ +
Sbjct: 2 PRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 60
Query: 177 EDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSN 236
EDLD+ D S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN
Sbjct: 61 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 120
Query: 237 VTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSV 296
+ GFLGGV+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L V
Sbjct: 121 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 180
Query: 297 WDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWS 356
WDPR N D+ H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS
Sbjct: 181 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWS 240
Query: 357 ALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----Q 411
LFE FF+ Y++Y+ + A L W G VES++R L +E++ + L Q
Sbjct: 241 KLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQ 300
Query: 412 CHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYM 466
P P E D + + +GL K E E D+ ++ F + +IN M
Sbjct: 301 SFPAPKENPDKEE--YRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKM 357
Query: 467 FWKPGMEICVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSS 508
F + M+I H++RKQ+ P +V + K T RL + SS
Sbjct: 358 F-EMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSS 403
>UNIPROTKB|D4A764 [details] [associations]
symbol:Papola "Protein Papola" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR002934
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
ArrayExpress:D4A764 Uniprot:D4A764
Length = 657
Score = 700 (251.5 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 129/263 (49%), Positives = 184/263 (69%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
+ YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 RHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +V R DFF ++
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEP 193
L EEV +L+ V +A VPV+K FDG+ ID+L+A ++ + EDLD+ D S+L ++D
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 194 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 253
+RSLNGCRV D+IL LVPN+++F TLR +K WAKR +YSN+ GFLGGV+WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 254 CQLYPNAVPSMLVSRFFRVYTMW 276
CQLYPNA+ S LV +FF V++ W
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKW 279
Score = 93 (37.8 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 61/228 (26%), Positives = 97/228 (42%)
Query: 358 LFEPYLFFESYRNYLQV-DIVAANAD---DLLAWKGWVESRLRQLTLMIERDTYGKL--- 410
+F + F Y N + ++ A+A L W G VES++R L +E++ + L
Sbjct: 275 VFSKWYVFRLYYNKIDCRHVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHV 334
Query: 411 --QCHPYPHEYVDTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSIN 463
Q P P E D + + +GL K E E D+ ++ F + +IN
Sbjct: 335 NPQSFPAPKESPDREE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAIN 391
Query: 464 MYMFWKPGMEICVSHIRRKQI----PPYVFPEGYKR-TRHPRLASQQRSSENGNEYQTGS 518
MF + M+I H++RKQ+ P +V + K T +LA+ SS + + S
Sbjct: 392 SKMF-ELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNS 450
Query: 519 GLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSNV 566
P S + P S S Q ++S +P A +SV S S V
Sbjct: 451 --MSVPSPTSAMKTSP-LNSSGSSQGRNSPAPAVTA-ASVTSIQASEV 494
>TAIR|locus:2084274 [details] [associations]
symbol:PAPS3 "poly(A) polymerase 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
Length = 507
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 157/407 (38%), Positives = 232/407 (57%)
Query: 31 DMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDAN 90
D + + L + +V GL S E++ KR V+ ++R+I WVK + ++ N
Sbjct: 14 DDESSISLRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATN 73
Query: 91 ALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAH 150
A I +GSY LGV+G +DIDALC+GP + S EDFF L ++L EV+EL V DA
Sbjct: 74 ATILPYGSYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAK 133
Query: 151 VPVMKFKFDGLSIDLLYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKL 210
VP+++FKFDG+ +DL YA + L + ++D+ + L D+DE + + L+G R IL+L
Sbjct: 134 VPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQL 193
Query: 211 VPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFF 270
VP++E F + LRC+K WAKRRGVY N+ GFLGGV+ A+L A VC PNA S L++ FF
Sbjct: 194 VPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFF 253
Query: 271 RVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKTHHMPIITPAYPCMNSSYNVSTST 330
+ W+WP PV+L G P MPI P + ++ ST
Sbjct: 254 YTFAHWQWPTPVVLLEDTYPSTGAP---PGL--------MPIQLPCGSHQYCNSTITRST 302
Query: 331 LRVMMDQFQYGNTICEE-VELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKG 389
++ +F G+ + ++ ++LN + W LFE Y + +Y + ++ + AAN +DL W G
Sbjct: 303 FYKIVAEFLLGHNLTKDYLKLNFS-WKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVG 361
Query: 390 WVESRLRQLTLMIERDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQ 436
WV+SR R L + IE + YG C P P EYV+T + F+ GLQ
Sbjct: 362 WVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQ 405
>UNIPROTKB|F8WAT4 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
Uniprot:F8WAT4
Length = 234
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 117/231 (50%), Positives = 156/231 (67%)
Query: 46 GLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHG 105
G++E +EE R VLG++ + K+W+ +++ + +V IFTFGSYRLGVH
Sbjct: 5 GVFEDEEELNHRLVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHT 64
Query: 106 PGADIDALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDL 165
GADIDALCV P +V R DFF L + + L+ V DA VPV+KF+FDG+ IDL
Sbjct: 65 KGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDL 123
Query: 166 LYASISRLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLK 225
++A ++ + ++LD+ D S L +D +RSLNGCRV D+IL LVPN E F TLR +K
Sbjct: 124 VFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVK 183
Query: 226 FWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMW 276
WAKRRG+YSN+ GFLGGV+WA+LVAR CQLYPNA S LV +FF V++ W
Sbjct: 184 LWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 234
>UNIPROTKB|H0YJ00 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
Ensembl:ENST00000553461 Uniprot:H0YJ00
Length = 203
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 102/189 (53%), Positives = 135/189 (71%)
Query: 112 ALCVGPSYVSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASIS 171
ALCV P +V R DFF ++ L EEV +L+ V +A VPV+K FDG+ ID+L+A ++
Sbjct: 2 ALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLA 60
Query: 172 RLVVREDLDISDMSVLNDVDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRR 231
+ EDLD+ D S+L ++D +RSLNGCRV D+IL LVPN+++F TLR +K WAKR
Sbjct: 61 LQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRH 120
Query: 232 GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAE 291
+YSN+ GFLGGV+WA+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E
Sbjct: 121 NIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECN 180
Query: 292 LGFSVWDPR 300
L VWDPR
Sbjct: 181 LNLPVWDPR 189
>UNIPROTKB|G3V2A0 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
Length = 475
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 121/351 (34%), Positives = 179/351 (50%)
Query: 248 LLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRDKT 307
+LVAR CQLYPNA+ S LV +FF V++ W WPNPV+L +E L VWDPR N D+
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 308 HHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYLFFES 367
H MPIITPAYP NS+YNVS ST VM+++F+ G I +E+ L+KA+WS LFE FF+
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQK 120
Query: 368 YRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKL-----QCHPYPHEYVDT 422
Y++Y+ + A L W G VES++R L +E++ + L Q P P E D
Sbjct: 121 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 180
Query: 423 SKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEF-----KLSINMYMFWKPGMEICVS 477
+ + +GL K E E D+ ++ F + +IN MF + M+I
Sbjct: 181 EE--FRTMWVIGLVFKKTEN-SENLSVDLTYDIQSFTDTVYRQAINSKMF-EVDMKIAAM 236
Query: 478 HIRRKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQT--GSGLKRKKDPE-SVDQDGP 534
H++RKQ+ + P H L +++ S G + S L D + S+ P
Sbjct: 237 HVKRKQLHQ-LLPN------HV-LQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSP 288
Query: 535 EKRQSISPQKQDSLSPDHLAPS-SVRSGTGSNVEPVIPDKRVLNQEIAEGG 584
SP S +P+ +V + + +N++ +N + GG
Sbjct: 289 TSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGG 339
>UNIPROTKB|H7C3W0 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
EMBL:AC012498 ProteinModelPortal:H7C3W0 Ensembl:ENST00000453839
Bgee:H7C3W0 Uniprot:H7C3W0
Length = 168
Score = 314 (115.6 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 65/154 (42%), Positives = 92/154 (59%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + G++E +EE R VLG++ + K+W+
Sbjct: 11 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 70
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNI 133
+++ + +V IFTFGSYRLGVH GADIDALCV P +V R DFF
Sbjct: 71 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 129
Query: 134 LAEMEEVTELQPVLDAHVPVMKFKFDGLSI-DLL 166
L + + L+ V DA VPV+KF+FDG+ + +LL
Sbjct: 130 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEVVELL 163
>UNIPROTKB|G3V3I9 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
GO:GO:0006351 GO:GO:0004652 EMBL:AL163051 HGNC:HGNC:14981
ChiTaRS:PAPOLA ProteinModelPortal:G3V3I9 SMR:G3V3I9
Ensembl:ENST00000556619 ArrayExpress:G3V3I9 Bgee:G3V3I9
Uniprot:G3V3I9
Length = 177
Score = 299 (110.3 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 65/161 (40%), Positives = 95/161 (59%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEK--------------REQ 59
K YG+T PIS+A P E D ++L + L G++E +EE ++ R
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRSNDLEYLIDNCFINRIL 77
Query: 60 VLGRIRQIAKDWVKELTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSY 119
+LG++ + K+W++E++ + ++E+ IFTFGSYRLGVH GADIDALCV P +
Sbjct: 78 ILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRH 137
Query: 120 VSREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDG 160
V R DFF ++ L EEV +L+ V +A VPV+K FDG
Sbjct: 138 VDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDG 177
>UNIPROTKB|F1NDP2 [details] [associations]
symbol:PAPOLA "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
evidence=IEA] InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351
GO:GO:0004652 GeneTree:ENSGT00390000017928 EMBL:AADN02003685
IPI:IPI00582545 Ensembl:ENSGALT00000018088 ArrayExpress:F1NDP2
Uniprot:F1NDP2
Length = 109
Score = 207 (77.9 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 36/91 (39%), Positives = 59/91 (64%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 17 KHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 76
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVH 104
E++ + ++E+ IFTFGSYRLGVH
Sbjct: 77 EISESKNLPQSVIENVGGKIFTFGSYRLGVH 107
>UNIPROTKB|G3V457 [details] [associations]
symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
ProteinModelPortal:G3V457 SMR:G3V457 Ensembl:ENST00000553689
ArrayExpress:G3V457 Bgee:G3V457 Uniprot:G3V457
Length = 111
Score = 207 (77.9 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 36/91 (39%), Positives = 59/91 (64%)
Query: 14 KQYGVTKPISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVK 73
K YG+T PIS+A P E D ++L + L G++E +EE ++R +LG++ + K+W++
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 74 ELTRLRGYSDQMVEDANALIFTFGSYRLGVH 104
E++ + ++E+ IFTFGSYRLGVH
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVH 108
>UNIPROTKB|G4N5I8 [details] [associations]
symbol:MGG_06121 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR007010 InterPro:IPR007012
InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
Length = 1238
Score = 223 (83.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 96/433 (22%), Positives = 187/433 (43%)
Query: 21 PISMAGPTEADMQRNRELEKFLVEAGLYESKEEDEKREQVLGRIRQIAKDWVKELTRLRG 80
P+ +A E+ M+ + L+ L G + EE+ +R+ +R + + E G
Sbjct: 595 PVDLARAPES-MRDPQVLKGMLESMGAIPAAEENPRRQAAFDALRHVVTGNLVE-----G 648
Query: 81 YSDQMVED---ANALIFTFGSYRLGVHGPGADIDALCVGPSYVSREEDFFFILHNIL-AE 136
SD D ++ ++ GS+ LGV +DID LC+GP +S F I A
Sbjct: 649 VSDASEYDRLRSSIIMVPVGSWGLGVSTLSSDIDCLCIGP--LSSSTFFALTTQRIKKAS 706
Query: 137 MEEVTELQPV--LDAHVPVM-KFKFDGLSIDLLYASISRLVVRED--LDISDMSVLNDVD 191
+E E++ + + A+ VM + + + +DL Y + + + + L + + +
Sbjct: 707 VESGLEIKLLRRVRANSGVMLELEVMSVRVDLQYCAATAVAEQWPAVLKLPPNDPIFALP 766
Query: 192 EPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVA 251
T+ L R D + + +P++ F R +K WA+ RG+YS G+LGG+ ++L+A
Sbjct: 767 AQTLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLA 826
Query: 252 RVCQLYPN------AVPSMLVSRFFRVYTMWRWPNPVMLCAIDEAELGFSVWDPRKNRRD 305
RVC+L +VP +L S FF Y + W N + +L + ++ R+
Sbjct: 827 RVCKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNYL-----RSARE 880
Query: 306 KTHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNTICEEVELNKAQWSALFEPYL-- 363
+ PA +N++ + +++ + + N + E + W F
Sbjct: 881 PLAILGFFPPA---LNTTLAATVPSMKAIARELSQANELLNEDGMT---WDTFFGASSAG 934
Query: 364 -------------FFESYRNYLQVDIV--AANADDLLAWKGWVESRLRQLTLMIERDTYG 408
F SY++++++++ + + GW+ESR L + + R
Sbjct: 935 GDKTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR-RLP 993
Query: 409 KLQCHPYPHEYVD 421
+L +P +V+
Sbjct: 994 QLNFRIWPQRFVE 1006
>UNIPROTKB|F1PYB9 [details] [associations]
symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
Length = 384
Score = 199 (75.1 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 65/248 (26%), Positives = 115/248 (46%)
Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR-KPGEVVQE 445
S++R L +ER+ + L H P + K + + +F+G+ +R + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 446 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 505
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVS 181
Query: 506 RSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSISPQKQDSLSPDHLAPSSVRSGTGSN 565
RSS +G + + S D +G +S K PD L PS +
Sbjct: 182 RSS-SGPQSKRSSLDSNCLDSSRDTDNGTPFNSPVSINKPSK--PD-LPPSGETERNNAE 237
Query: 566 VEPVIPDK 573
V+ +K
Sbjct: 238 PTAVVVEK 245
>UNIPROTKB|Q59G05 [details] [associations]
symbol:PAPOLG "Poly(A) polymerase gamma variant"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] InterPro:IPR007010
InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
Uniprot:Q59G05
Length = 382
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 67/258 (25%), Positives = 123/258 (47%)
Query: 333 VMMDQFQYGNTICEEVELNKAQWSALFEPYLFFESYRNYLQVDIVAANADDLLAWKGWVE 392
VM+++F+ G + +E+ K+ WS L EP FF+ YR+Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 393 SRLRQLTLMIERDTYGKLQCHPYPHEYVDTS---KPCAHCA-FFMGL--QR-KPGEVVQE 445
S++R L +ER+ + L H P + K + + +F+G+ +R + E V
Sbjct: 63 SKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNI 121
Query: 446 GQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIRRKQIPPYVFPEGYKRTRHPRLASQQ 505
+DI+ + N K GM+I +H+++KQ+ Y+ E ++ + L+
Sbjct: 122 DLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVN 181
Query: 506 RSS---ENGNEYQTGSGLKRKKDPES-VDQDGPEKRQ---SISPQKQDSLSPDHLA---P 555
RSS ++ S L +D ++ + P + S+ +++S P + P
Sbjct: 182 RSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 241
Query: 556 SSVRSGTGSNVEPVIPDK 573
SV G ++ PVI K
Sbjct: 242 LSVPPAQGLSI-PVIGAK 258
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 697 631 0.00091 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 626 (67 KB)
Total size of DFA: 371 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.46u 0.11s 54.57t Elapsed: 00:00:03
Total cpu time: 54.47u 0.11s 54.58t Elapsed: 00:00:03
Start: Mon May 20 19:39:43 2013 End: Mon May 20 19:39:46 2013