BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005431
(697 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 177/280 (63%), Gaps = 18/280 (6%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+R+ RK+G G FG++Y+G I TNE EVA+K E+ +K YE ++Y
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNI---QTNE-------EVAIKLENVKTKHPQL--LYESKIY 56
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
L G G+P V + G +GDY V+VMD+LGPSL D++N S +S++ V +A + I+ +
Sbjct: 57 RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 116
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
E +HS+ ++H D+KP+NFL+G ++ ++++D GLA ++RD+ST QH+ Y + ++
Sbjct: 117 EFVHSKSFLHRDIKPDNFLMGLGRRANQ--VYIIDFGLAKKYRDTSTHQHIPYRENKNL- 173
Query: 310 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 366
GT RYASV+ HLG SRRDDLESL Y L++ LRG LPWQG + + K + +KK+
Sbjct: 174 TGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV 233
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLF 406
ATS E LC P F + Y +L+FD++P+Y+ LF
Sbjct: 234 ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLF 273
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 166/280 (59%), Gaps = 18/280 (6%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
YR+ RK+G G FG +Y+G I EVA+K E +K E ++Y
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIA----------AGEEVAIKLECVKTKHPQL--HIESKIY 58
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
+ G G+P + + G +GDY VMVM++LGPSL D++N S S++ V +A + IS +
Sbjct: 59 KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 118
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
E +HS+ ++H DVKP+NFL+G + + ++++D GLA ++RD+ T QH+ Y + ++
Sbjct: 119 EYIHSKNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNL- 175
Query: 310 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF---LVCKKKM 366
GT RYAS++ HLG SRRDDLESL Y L++ G LPWQG + K + +KKM
Sbjct: 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLF 406
+T E LC P F ++ + +L+FD++P+Y+ LF
Sbjct: 236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 275
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 166/280 (59%), Gaps = 18/280 (6%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
YR+ RK+G G FG +Y+G I EVA+K E +K E ++Y
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIA----------AGEEVAIKLECVKTKHPQL--HIESKIY 56
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
+ G G+P + + G +GDY VMVM++LGPSL D++N S S++ V +A + IS +
Sbjct: 57 KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 116
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
E +HS+ ++H DVKP+NFL+G + + ++++D GLA ++RD+ T QH+ Y + ++
Sbjct: 117 EYIHSKNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNL- 173
Query: 310 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF---LVCKKKM 366
GT RYAS++ HLG SRRDDLESL Y L++ G LPWQG + K + +KKM
Sbjct: 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 233
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLF 406
+T E LC P F ++ + +L+FD++P+Y+ LF
Sbjct: 234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 273
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 165/280 (58%), Gaps = 18/280 (6%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
YR+ RK+G G FG +Y+G I EVA+K E +K E + Y
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGE----------EVAIKLECVKTKHPQL--HIESKFY 58
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
+ G G+P + + G +GDY VMVM++LGPSL D++N S S++ V +A + IS +
Sbjct: 59 KMMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 118
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
E +HS+ ++H DVKP+NFL+G + + ++++D GLA ++RD+ T QH+ Y + ++
Sbjct: 119 EYIHSKNFIHRDVKPDNFLMGLGKKGN--LVYIIDFGLAKKYRDARTHQHIPYRENKNL- 175
Query: 310 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF---LVCKKKM 366
GT RYAS++ HLG SRRDDLESL Y L++ G LPWQG + K + +KKM
Sbjct: 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLF 406
+T E LC P F ++ + +L+FD++P+Y+ LF
Sbjct: 236 STPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLF 275
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 162/284 (57%), Gaps = 16/284 (5%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y++ R++G+G FG ++ G + +VA+KFE R S E++ Y
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQ----------QVAIKFEPRRSDAPQLRD--EYRTY 59
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
L G G+P V++ G++G + V+V+D+LGPSL D+ + S++ VA A + ++ +
Sbjct: 60 KLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 119
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
+ +H + V+ D+KP+NFL+G P + + +++VD G+ +RD T QH+ Y ++ ++
Sbjct: 120 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL- 178
Query: 310 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 366
GT RY S++ HLGR SRRDDLE+L + ++ LRG LPWQG + + K + +KK
Sbjct: 179 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 238
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIV 410
+T LC P+ F ++ Y NL FD P+Y LF ++
Sbjct: 239 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 162/284 (57%), Gaps = 16/284 (5%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y++ R++G+G FG ++ G + +VA+KFE R S E++ Y
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQ----------QVAIKFEPRRSDAPQLRD--EYRTY 58
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
L G G+P V++ G++G + V+V+D+LGPSL D+ + S++ VA A + ++ +
Sbjct: 59 KLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV 118
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
+ +H + V+ D+KP+NFL+G P + + +++VD G+ +RD T QH+ Y ++ ++
Sbjct: 119 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL- 177
Query: 310 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG---ENKGFLVCKKKM 366
GT RY S++ HLGR SRRDDLE+L + ++ LRG LPWQG + + K + +KK
Sbjct: 178 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 237
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIV 410
+T LC P+ F ++ Y NL FD P+Y LF ++
Sbjct: 238 STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 281
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 162/285 (56%), Gaps = 16/285 (5%)
Query: 128 PVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 187
P +R+ +K+G G FG++ +G+ + TNE VA+K E S+ E++
Sbjct: 4 PNFRVGKKIGCGNFGELRLGKNL---YTNEY-------VAIKLEPIKSRAPQLH--LEYR 51
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y L + GVP+V++ G G Y MV+++LGPSL D+++ T +++ V IAI+ I+
Sbjct: 52 FYKQLSATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLIT 111
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
+E +H++ ++ DVKPENFL+G P T + + ++D GLA + D T +H+ Y +
Sbjct: 112 RMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKS 171
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 364
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 172 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 230
Query: 365 KMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGI 409
K AT E LC P+ ++ YV L F E+P+Y LF +
Sbjct: 231 KRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 275
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 161/282 (57%), Gaps = 17/282 (6%)
Query: 128 PVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 187
P +R+ +K+G G FG++ +G+ + TNE VA+K E S+ E++
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNL---YTNEY-------VAIKLEPMKSRAPQLH--LEYR 56
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y LG G+P+V++ G G Y MV+++LGPSL D+++ T S++ V IAI+ IS
Sbjct: 57 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLIS 116
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
+E +HS+ ++ DVKPENFL+G P ++ + ++D GLA + D T +H+ Y +
Sbjct: 117 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKS 176
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 364
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 177 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235
Query: 365 KMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLF 406
K AT E LC P+ ++ YV L F E+P+Y LF
Sbjct: 236 KRATPIEVLCENFPE-MATYLRYVRRLDFFEKPDYDYLRKLF 276
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 161/285 (56%), Gaps = 17/285 (5%)
Query: 128 PVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 187
P +R+ +K+G G FG++ +G+ + TNE VA+K E S+ E++
Sbjct: 30 PNFRVGKKIGCGNFGELRLGKNL---YTNEY-------VAIKLEPMKSRAPQLH--LEYR 77
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y LG G+P+V++ G G Y MV+++LGPSL D+++ T S++ V IAI+ IS
Sbjct: 78 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLIS 137
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
+E +HS+ ++ DVKPENFL+G P ++ + ++D LA + D T +H+ Y +
Sbjct: 138 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKS 197
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 364
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 198 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 256
Query: 365 KMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGI 409
K AT E LC P+ ++ YV L F E+P+Y LF +
Sbjct: 257 KRATPIEVLCENFPE-MATYLRYVRRLDFFEKPDYDYLRKLFTDL 300
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 161/285 (56%), Gaps = 17/285 (5%)
Query: 128 PVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ 187
P +R+ +K+G G FG++ +G+ + TNE VA+K E S+ E++
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNL---YTNEY-------VAIKLEPMKSRAPQLH--LEYR 56
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y LG G+P+V++ G G Y MV+++LGPSL D+++ T S++ V IAI+ IS
Sbjct: 57 FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLIS 116
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
+E +HS+ ++ DVKPENFL+G P ++ + ++D LA + D T +H+ Y +
Sbjct: 117 RMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKS 176
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKK 364
+ GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + +
Sbjct: 177 L-TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235
Query: 365 KMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGI 409
K AT E LC P+ ++ YV L F E+P+Y LF +
Sbjct: 236 KRATPIEVLCENFPE-MATYLRYVRRLDFFEKPDYDYLRKLFTDL 279
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 159/283 (56%), Gaps = 17/283 (6%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYN 190
R+ +K+G G FG++ +G+ + TNE VA+K E S+ E++ Y
Sbjct: 3 RVGKKIGCGNFGELRLGKNL---YTNEY-------VAIKLEPIKSRAPQLH--LEYRFYK 50
Query: 191 ALGGS-HGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
LG + G+P+V++ G G Y MV+++LGPSL D+++ T +++ V IAI+ +S +
Sbjct: 51 QLGSAGEGLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRM 110
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
E +HS+ ++ DVKPENFL+G E + ++D GLA + D T +H+ Y + +
Sbjct: 111 EYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSL- 169
Query: 310 RGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGEN---KGFLVCKKKM 366
GT RY S++ HLG+ SRRDDLE+L + ++ LRG LPWQG + + + + K
Sbjct: 170 TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR 229
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGI 409
T E LC P+ ++ YV L F E+P+Y +LF +
Sbjct: 230 NTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDL 272
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 134/291 (46%), Gaps = 38/291 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA----------LKFEHRSSKGCNYG 181
+ +K+G GGFG +Y+ PTN E+ V+V LKF R +K
Sbjct: 41 LGKKIGSGGFGLIYLAF---PTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97
Query: 182 PPYEWQVYNALGGS--HGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E + + LG +G FKGR Y MVM+ LG L + N T V
Sbjct: 98 KWIERKQLDYLGIPLFYGSGLTEFKGR--SYRFMVMERLGIDLQKISGQNG-TFKKSTVL 154
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ I + +LE +H YVHGD+K N LLG + PD+ ++L D GL+ R+ G H
Sbjct: 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLLGY-KNPDQ--VYLADYGLSYRY--CPNGNH 209
Query: 300 VEYDQRP-DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG 358
+Y + P GT+ + S+ AH G SRR D+E L Y ++ L G+LPW+ +
Sbjct: 210 KQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269
Query: 359 FLVCKKKMATS-PETL---------CCFCPQPFRLFVEYVVNLKFDEEPNY 399
K + P+++ CC Q F+ +L +DE+PNY
Sbjct: 270 VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQ----FLVCAHSLAYDEKPNY 316
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 43/297 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTG---PGAVEVA----------LKFEHRSSK 176
+++ +G+GGFG +Y + N++E G P V+V LKF R++K
Sbjct: 37 WKVGLPIGQGGFGCIY----LADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 177 GCNYGPPYEWQ--VYNALGGSHGVPR-----VHFKGRQGDYYVMVMDMLGPSLWDVWNNN 229
P + Q + GVP+ +H K + Y M+MD G L ++ N
Sbjct: 93 ------PEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKS-YRFMIMDRFGSDLQKIYEAN 145
Query: 230 SHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT 289
+ S + V +++ + ILE +H YVHGD+K N LL + PD+ ++LVD GLA
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN-YKNPDQ--VYLVDYGLAY 202
Query: 290 RWRDSSTGQHVEYDQRPD-VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 348
R+ G H EY + P GT+ + S+ AH G SRR DLE L Y +I L G LP
Sbjct: 203 RY--CPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLP 260
Query: 349 WQGYQGENKGFLVCKKKMATSPETLCCFC------PQPFRLFVEYVVNLKFDEEPNY 399
W+ + K K + + +L C P ++E V L + E+P Y
Sbjct: 261 WEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLY 317
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 43/297 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTG---PGAVEVA----------LKFEHRSSK 176
+++ +G+GGFG +Y + N++E G P V+V LKF R++K
Sbjct: 37 WKVGLPIGQGGFGCIY----LADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 177 GCNYGPPYEWQ--VYNALGGSHGVPR-----VHFKGRQGDYYVMVMDMLGPSLWDVWNNN 229
P + Q + GVP+ +H K + Y M+MD G L ++ N
Sbjct: 93 ------PEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKS-YRFMIMDRFGSDLQKIYEAN 145
Query: 230 SHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT 289
+ S + V +++ + ILE +H YVHGD+K N LL + PD+ ++LVD GLA
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN-YKNPDQ--VYLVDYGLAY 202
Query: 290 RWRDSSTGQHVEYDQRPD-VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 348
R+ G H EY + P GT+ + S+ AH G SRR DLE L Y +I L G LP
Sbjct: 203 RY--CPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLP 260
Query: 349 WQGYQGENKGFLVCKKKMATSPETLCCFC------PQPFRLFVEYVVNLKFDEEPNY 399
W+ + K K + + +L C P ++E V L + E+P Y
Sbjct: 261 WEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLY 317
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 143/315 (45%), Gaps = 49/315 (15%)
Query: 118 LPEKVQVG------GSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTG---PGAVEVA- 167
L E+ VG + +++ +G+GGFG +Y + N++E G P V+V
Sbjct: 19 LAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIY----LADMNSSESVGSDAPCVVKVEP 74
Query: 168 ---------LKFEHRSSKGCNYGPPYEWQ--VYNALGGSHGVPR-----VHFKGRQGDYY 211
LKF R++K P + Q + GVP+ +H K + Y
Sbjct: 75 SDNGPLFTELKFYQRAAK------PEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKS-YR 127
Query: 212 VMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGP 271
M+MD G L ++ N+ S + V +++ + ILE +H YVHGD+K N LL
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN- 186
Query: 272 PETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD-VFRGTVRYASVHAHLGRTGSRRD 330
+ PD+ ++LVD GLA R+ G H Y P GT+ + S+ AH G SRR
Sbjct: 187 YKNPDQ--VYLVDYGLAYRY--CPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRG 242
Query: 331 DLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLC--CF----CPQPFRLF 384
DLE L Y +I L G LPW+ + K K + + +L CF P +
Sbjct: 243 DLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKY 302
Query: 385 VEYVVNLKFDEEPNY 399
+E V L + E+P Y
Sbjct: 303 METVKLLDYTEKPLY 317
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 203 FKGRQGDYYVMVMDMLGPSLWDVWN-NNSHTMSIEMVACIAIEAISILEKMHSRGYVHGD 261
F Q Y +V+ LG SL + + H +S V +A + LE +H YVHG+
Sbjct: 125 FGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGN 184
Query: 262 VKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEY-DQRPDVFRGTVRYASVHA 320
V EN + P D+ ++ L G A R+ +G+HV Y + G + + S+
Sbjct: 185 VTAENIFVDPE---DQSQVTLAGYGFAFRY--CPSGKHVAYVEGSRSPHEGDLEFISMDL 239
Query: 321 HLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFC--- 377
H G SRR DL+SL Y ++ L G LPW + + K+K P C
Sbjct: 240 HKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHW 299
Query: 378 ---PQPFRLFVEYVVNLKFDEEPNYA 400
+ + +++ V+ L ++E+P YA
Sbjct: 300 IRPSETLQKYLKVVMALTYEEKPPYA 325
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S V++I+ K+G+G F VY+ + GP ++ALK +S E
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLA------TAQLQVGPEE-KIALKHLIPTSHPIRIAA--EL 70
Query: 187 QVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEA 245
Q GG V V + R+ D+ V+ M L S D+ N ++S + V +
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNL 126
Query: 246 ISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDS 294
L+++H G VH DVKP NFL KK LVD GLA D+
Sbjct: 127 FKALKRIHQFGIVHRDVKPSNFLYN----RRLKKYALVDFGLAQGTHDT 171
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y+I KLG GG VY+ T N + A+ + + + + K +E +V+
Sbjct: 13 YKIVDKLGGGGMSTVYLAE---DTILNIKVAIKAIFIPPREKEETLKR------FEREVH 63
Query: 190 NALGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
N+ SH + + + D Y +VM+ + GP+L + ++ +S++ + +
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILD 122
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQ--HVEYDQR 305
++ H VH D+KP+N L+ K L + D G+A ++S Q HV
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDS-----NKTLKIFDFGIAKALSETSLTQTNHV----- 172
Query: 306 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GTV+Y S G D+ S+ L +L G P+ G
Sbjct: 173 ----LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 22/260 (8%)
Query: 112 EGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFE 171
E S+ PEK++ + + R LGKGG+G+V+ R++ NT + ++ A+
Sbjct: 4 ETSVNRGPEKIR---PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV- 59
Query: 172 HRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH 231
R++K + E + + V ++ G Y+++ + G L+
Sbjct: 60 -RNAKDTAHTKA-ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF--MQLERE 115
Query: 232 TMSIEMVACIAIEAISI-LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+ +E AC + IS+ L +H +G ++ D+KPEN +L + + L D GL
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN-----HQGHVKLTDFGLCKE 170
Query: 291 WRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 350
T H F GT+ Y + + +R D SL + +L G P+
Sbjct: 171 SIHDGTVTH--------TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
Query: 351 GYQGENKGFLVCKKKMATSP 370
G + + K K+ P
Sbjct: 223 GENRKKTIDKILKCKLNLPP 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 22/260 (8%)
Query: 112 EGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFE 171
E S+ PEK++ + + R LGKGG+G+V+ R++ NT + ++ A+
Sbjct: 4 ETSVNRGPEKIR---PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV- 59
Query: 172 HRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH 231
R++K + E + + V ++ G Y+++ + G L+
Sbjct: 60 -RNAKDTAHTKA-ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF--MQLERE 115
Query: 232 TMSIEMVACIAIEAISI-LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+ +E AC + IS+ L +H +G ++ D+KPEN +L + + L D GL
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN-----HQGHVKLTDFGLCKE 170
Query: 291 WRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 350
T H F GT+ Y + + +R D SL + +L G P+
Sbjct: 171 SIHDGTVTH--------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
Query: 351 GYQGENKGFLVCKKKMATSP 370
G + + K K+ P
Sbjct: 223 GENRKKTIDKILKCKLNLPP 242
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + + LG+G FG+V++ ++I ++ + ++ A LK R E +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM------ERDI 79
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ V ++H+ + +++D L G L+ + + E V E
Sbjct: 80 LVEVNHPFIV-KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 137
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSK--------ESIDHEKKAY 184
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMA 367
F GTV Y + R ++ D S + +L G LP+QG + ++ K K+
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 368 T----SPE 371
SPE
Sbjct: 245 MPQFLSPE 252
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 27/200 (13%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTN--------ERTGPGAVEVALKFEHRSSKGCNYG 181
Y + RKLG G F V++ + + NT+ ++ A E +K R + N
Sbjct: 21 YILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 182 PPYEWQVYNALGGSHGVPRV-HF--KGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEM 237
+++G +H + + HF KG G + VMV ++LG +L + H + +
Sbjct: 80 E-------DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 238 VACIAIEAISILEKMHSR-GYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRD-- 293
V I+ + + L+ MH R G +H D+KPEN L+ ++P+ ++ + DLG A W D
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC-WYDEH 191
Query: 294 -SSTGQHVEYDQRPDVFRGT 312
+++ Q EY + P+V G
Sbjct: 192 YTNSIQTREY-RSPEVLLGA 210
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 27/200 (13%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTN--------ERTGPGAVEVALKFEHRSSKGCNYG 181
Y + RKLG G F V++ + + NT+ ++ A E +K R + N
Sbjct: 21 YILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 182 PPYEWQVYNALGGSHGVPRV-HF--KGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEM 237
+++G +H + + HF KG G + VMV ++LG +L + H + +
Sbjct: 80 E-------DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 238 VACIAIEAISILEKMHSR-GYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRD-- 293
V I+ + + L+ MH R G +H D+KPEN L+ ++P+ ++ + DLG A W D
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC-WYDEH 191
Query: 294 -SSTGQHVEYDQRPDVFRGT 312
+++ Q EY + P+V G
Sbjct: 192 YTNSIQTREY-RSPEVLLGA 210
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 27/249 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + + LG+G FG+V++ ++I ++ + ++ A LK R E
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN- 85
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ ++H+ + +++D L G L+ + + E V E
Sbjct: 86 ------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 138
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSK--------ESIDHEKKAY 185
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMA 367
F GTV Y + R ++ D S + +L G LP+QG + ++ K K+
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 245
Query: 368 T----SPET 372
SPE
Sbjct: 246 MPQFLSPEA 254
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 27/249 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + + LG+G FG+V++ ++I ++ + ++ A LK R E
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN- 84
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ ++H+ + +++D L G L+ + + E V E
Sbjct: 85 ------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 137
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSK--------ESIDHEKKAY 184
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMA 367
F GTV Y + R ++ D S + +L G LP+QG + ++ K K+
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 368 T----SPET 372
SPE
Sbjct: 245 MPQFLSPEA 253
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 15/193 (7%)
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+Y G + + + F +Y++ + G S+ H E + + + +
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNERE-ASRVVRDVAA 122
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
L+ +H++G H D+KPEN L PE K+ DLG + +S T P
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP- 181
Query: 308 VFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF--- 359
G+ Y + V +R DL SL L +L G P+ G+ G + G+
Sbjct: 182 --CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRG 239
Query: 360 ---LVCKKKMATS 369
VC+ K+ S
Sbjct: 240 EVCRVCQNKLFES 252
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+ + RK+G G FG+V + + I N++ V +K RS+K ++
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHID----NKKYYAVKVVRNIKKYTRSAK---IEADILKKIQ 89
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWN-NNSHTMSIEMVACIAIEAISI 248
N ++ + + H K D+ ++ + LGPSL+++ NN + IE + IE +
Sbjct: 90 NDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKA 149
Query: 249 LEKMHSRGYVHGDVKPENFLLGPP 272
L + H D+KPEN LL P
Sbjct: 150 LNYLRKMSLTHTDLKPENILLDDP 173
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRS----------SKGCN 179
YR+ LGKGGFG V+ G R+ +R ++VA+K R+ S C
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRL-----TDR-----LQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 180 YGPPYEWQVYNALGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEM 237
W+V A GG GV R+ F+ ++G V+ + L+D + +
Sbjct: 83 LEVALLWKV-GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFD-YITEKGPLGEGP 140
Query: 238 VACIAIEAISILEKMHSRGYVHGDVKPENFLL 269
C + ++ ++ HSRG VH D+K EN L+
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ S+ DL +L + L+ G P++
Sbjct: 189 ARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 24/248 (9%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + + LG+G FG+V++ R++ ++ ++ A LK R E +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM------ERDI 83
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ V ++H+ + +++D L G L+ + + E V E
Sbjct: 84 LADVNHPF-VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELAL 141
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
L+ +HS G ++ D+KPEN LL +E + L D GL+ + ++++++
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLD-----EEGHIKLTDFGLSK--------EAIDHEKKAY 188
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMA 367
F GTV Y + + S D S + +L G LP+QG + L+ K K+
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG 248
Query: 368 TSPETLCC 375
P+ L
Sbjct: 249 M-PQFLST 255
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 363
R + F GT +Y S ++ + DL +L + L+ G P ++ N+G + K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP---FRAGNEGLIFAK 245
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 14/120 (11%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCK 363
R + F GT +Y S ++ + DL +L + L+ G P ++ N+G + K
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP---FRAGNEGLIFAK 245
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 91/237 (38%), Gaps = 27/237 (11%)
Query: 119 PEKVQVGGSPV---YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSS 175
P+ V++ V Y I +LG G FG V+ R+ T TG + H S
Sbjct: 145 PQPVEIKHDHVLDHYDIHEELGTGAFGVVH---RV----TERATGNNFAAKFVMTPHESD 197
Query: 176 KGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMS 234
K E Q + L V +H + VM+ + M G L++ + + MS
Sbjct: 198 KETVRK---EIQTMSVLRHPTLV-NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS 253
Query: 235 IEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDS 294
+ + L MH YVH D+KPEN + T +L L+D GL
Sbjct: 254 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF---TTKRSNELKLIDFGLTA----- 305
Query: 295 STGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
H++ Q V GT +A+ G+ D+ S+ LL G P+ G
Sbjct: 306 ----HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 210 YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL 269
+Y++ M G S+ + H +E + + + S L+ +H++G H D+KPEN L
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELE-ASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 270 GPPETPDEKKLFLVDLGLATRWRDSST----------GQHVEYDQRPDVFRGTVRYASVH 319
P K+ DLG + + EY P+V AS++
Sbjct: 145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY-MAPEVVEAFSEEASIY 203
Query: 320 AHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG 358
+R DL SL L LL G P+ G G + G
Sbjct: 204 -------DKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 91/237 (38%), Gaps = 27/237 (11%)
Query: 119 PEKVQVGGSPV---YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSS 175
P+ V++ V Y I +LG G FG V+ R+ T TG + H S
Sbjct: 39 PQPVEIKHDHVLDHYDIHEELGTGAFGVVH---RV----TERATGNNFAAKFVMTPHESD 91
Query: 176 KGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMS 234
K E Q + L V +H + VM+ + M G L++ + + MS
Sbjct: 92 KETVRK---EIQTMSVLRHPTLV-NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS 147
Query: 235 IEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDS 294
+ + L MH YVH D+KPEN + T +L L+D GL
Sbjct: 148 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT---TKRSNELKLIDFGLTA----- 199
Query: 295 STGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
H++ Q V GT +A+ G+ D+ S+ LL G P+ G
Sbjct: 200 ----HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+A+ LE +HSR +HGDVK +N LL + D L D G A + G+ +
Sbjct: 174 QALEGLEYLHSRRILHGDVKADNVLL----SSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 352
D GT + + LGR+ + D+ S ++ +L G PW +
Sbjct: 230 ---DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 275
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 187 ARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+A+ LE +HSR +HGDVK +N LL + D L D G A + G+ +
Sbjct: 193 QALEGLEYLHSRRILHGDVKADNVLL----SSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 352
D GT + + LGR+ + D+ S ++ +L G PW +
Sbjct: 249 ---DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQF 294
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 189
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 190 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 193
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 194 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 166
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 167 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 165
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 166 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 191
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 192 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 186
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 188
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 164
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 165 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 163
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 164 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 170
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 171 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 189
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 190 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 185
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 186 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
E +S LE +H +G +H D+KPEN LL ++ + + D G A S
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESK------Q 185
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R + F GT +Y S ++ + DL +L + L+ G P++
Sbjct: 186 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 118 LPEKVQVGGSPVYR---IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRS 174
+P+ V+V VY I +LG G FG V+ R + G V VA KF +
Sbjct: 38 VPQPVEVKQGSVYDYYDILEELGSGAFGVVH--RCV-------EKATGRVFVA-KFINTP 87
Query: 175 SKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYY--VMVMDML-GPSLWDVWNNNSH 231
Y E + N L H ++ D Y V++++ L G L+D +
Sbjct: 88 YPLDKYTVKNEISIMNQL---HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY 144
Query: 232 TMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
MS V +A L+ MH VH D+KPEN + ET + ++D GLAT+
Sbjct: 145 KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMC---ETKKASSVKIIDFGLATK 200
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 90/241 (37%), Gaps = 54/241 (22%)
Query: 129 VYRIDRKLGKGGFGQVYV--------GRRIGPTNTNERTGP-----GAVEVALKFEHRSS 175
++ RKLG G FG V++ R I N + P +EV +H
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDH--- 79
Query: 176 KGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH--TM 233
P +++ H + Y VM G L + + + +
Sbjct: 80 -------PNIIKIFEVFEDYHNM-----------YIVMETCEGGELLERIVSAQARGKAL 121
Query: 234 SIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD 293
S VA + + ++ L HS+ VH D+KPEN L +T + ++D GLA ++
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ--DTSPHSPIKIIDFGLAELFKS 179
Query: 294 ---SSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 350
S+ P+VF+ V + + D+ S + FLL G LP+
Sbjct: 180 DEHSTNAAGTALYMAPEVFKRDVTF-------------KCDIWSAGVVMYFLLTGCLPFT 226
Query: 351 G 351
G
Sbjct: 227 G 227
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+A+ LE +H+R +HGDVK +N LL + D + L D G A + G+ +
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDGLGKSLLTG 227
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 352
D GT + + +G+ + D+ S ++ +L G PW Y
Sbjct: 228 ---DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 273
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+A+ LE +H+R +HGDVK +N LL + D + L D G A + G+ +
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 352
D GT + + +G+ + D+ S ++ +L G PW Y
Sbjct: 230 ---DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+A+ LE +H+R +HGDVK +N LL + D + L D G A + G+ +
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLL----SSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 352
D GT + + +G+ + D+ S ++ +L G PW Y
Sbjct: 214 ---DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 20/225 (8%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S Y+ R LGKG FG+V + + ++ TG + K E
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 83
Query: 187 QVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
Q+ L + + F +G +Y++ G L+D + ++ A I + +
Sbjct: 84 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 142
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
S + MH VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKM 191
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT Y + G T + D+ S L LL G P+ G
Sbjct: 192 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSS--KGCNYGPPY 184
S +Y+ +KLG G +G+V + R VE A+K ++S N
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCR----------DKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 185 EWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMV--ACIA 242
E V L + + F + +YY+++ G L+D H M V A I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD---EIIHRMKFNEVDAAVII 142
Query: 243 IEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH--- 299
+ +S + +H VH D+KPEN LL E + + +VD GL+ + + +
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEK--DALIKIVDFGLSAVFENQKKMKERLG 200
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
Y P+V R + + D+ S+ L LL G P+ G
Sbjct: 201 TAYYIAPEVLR-------------KKYDEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 20/225 (8%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S Y+ R LGKG FG+V + + ++ TG + K E
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 187 QVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
Q+ L + + F +G +Y++ G L+D + ++ A I + +
Sbjct: 78 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 136
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
S + MH VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKM 185
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT Y + G T + D+ S L LL G P+ G
Sbjct: 186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 238 VACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+A I E + L+ +HS +H D+K N LL + ++ L D G+A G
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLLS-----EHGEVKLADFGVA--------G 167
Query: 298 QHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
Q + + + F GT + + + D+ SL T I L RG P
Sbjct: 168 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 227
Query: 358 GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNY 399
FL+ K +P TL +P + FVE +N +EP++
Sbjct: 228 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 261
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 23/161 (14%)
Query: 210 YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL 269
+Y++ M G S+ + H +E + + + S L+ +H++G H D+KPEN L
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELE-ASVVVQDVASALDFLHNKGIAHRDLKPENILC 144
Query: 270 GPPETPDEKKLFLVDLGLATRWRDSSTGQHV------------EYDQRPDVFRGTVRYAS 317
P K + D GL + + + + EY P+V AS
Sbjct: 145 EHPNQVSPVK--ICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY-MAPEVVEAFSEEAS 201
Query: 318 VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKG 358
++ +R DL SL L LL G P+ G G + G
Sbjct: 202 IY-------DKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 238 VACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+A I E + L+ +HS +H D+K N LL + ++ L D G+A G
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLS-----EHGEVKLADFGVA--------G 152
Query: 298 QHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
Q + + + F GT + + + D+ SL T I L RG P
Sbjct: 153 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
Query: 358 GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNY 399
FL+ K +P TL +P + FVE +N +EP++
Sbjct: 213 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 246
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 20/225 (8%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S Y+ R LGKG FG+V + + ++ TG + K E
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 100
Query: 187 QVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
Q+ L + + F +G +Y++ G L+D + ++ A I + +
Sbjct: 101 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 159
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
S + MH VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKM 208
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT Y + G T + D+ S L LL G P+ G
Sbjct: 209 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 20/225 (8%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S Y+ R LGKG FG+V + + ++ TG + K E
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 101
Query: 187 QVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
Q+ L + + F +G +Y++ G L+D + ++ A I + +
Sbjct: 102 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 160
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
S + MH VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKM 209
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT Y + G T + D+ S L LL G P+ G
Sbjct: 210 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 27/223 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG-PPYEWQV 188
Y + +G GGF +V + I TG VA+K +++ G + E +
Sbjct: 12 YELHETIGTGGFAKVKLACHI-------LTGE---MVAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
L H H ++++ G L+D + + +S E + + +S
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD-YIISQDRLSEEETRVVFRQIVSA 120
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDV 308
+ +HS+GY H D+KPEN L + KL L+D GL + + + D
Sbjct: 121 VAYVHSQGYAHRDLKPENLLFD-----EYHKLKLIDFGLCAKPKGNK-------DYHLQT 168
Query: 309 FRGTVRYASVHAHLGRT--GSRRDDLESLAYTLIFLLRGRLPW 349
G++ YA+ G++ GS D+ S+ L L+ G LP+
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEA-DVWSMGILLYVLMCGFLPF 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 207 QGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
+G + ++ GPSL ++ V + + L +HS+G VH DVKP N
Sbjct: 128 EGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN 187
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQR---PDVFRGTVRYASVHAHLG 323
LGP + L D GL + G+ E D R P++ +G+ A+ LG
Sbjct: 188 IFLGP-----RGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLG 242
Query: 324 RT 325
T
Sbjct: 243 LT 244
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 238 VACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+A I E + L+ +HS +H D+K N LL + ++ L D G+A G
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLS-----EHGEVKLADFGVA--------G 152
Query: 298 QHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
Q + + + F GT + + + D+ SL T I L RG P
Sbjct: 153 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 212
Query: 358 GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNY 399
FL+ K +P TL +P + FVE +N +EP++
Sbjct: 213 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 246
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 238 VACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+A I E + L+ +HS +H D+K N LL E D K L D G+A G
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLS--EQGDVK---LADFGVA--------G 164
Query: 298 QHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
Q + + + F GT + + + D+ SL T I L +G P
Sbjct: 165 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV 224
Query: 358 GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVN 390
FL+ K SP TL +PF+ FVE +N
Sbjct: 225 LFLIPK----NSPPTLEGQHSKPFKEFVEACLN 253
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 190 NALGGSHGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G+ Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 75
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 76 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 135
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 136 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 191
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 192 CSRYYRAPELIFGATDYTS 210
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 86
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 87 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 146
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 147 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 202
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 203 CSRYYRAPELIFGATDYTS 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 68
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 69 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 128
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 184
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 185 CSRYYRAPELIFGATDYTS 203
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 190 NALGGSHGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G+ Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 79
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 139
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 196 CSRYYRAPELIFGATDYTS 214
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 238 VACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+A I E + L+ +HS +H D+K N LL + ++ L D G+A G
Sbjct: 126 IATILREILKGLDYLHSEKKIHRDIKAANVLLS-----EHGEVKLADFGVA--------G 172
Query: 298 QHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
Q + + + F GT + + + D+ SL T I L RG P
Sbjct: 173 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 232
Query: 358 GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNY 399
FL+ K +P TL +P + FVE +N +EP++
Sbjct: 233 LFLIPK----NNPPTLEGNYSKPLKEFVEACLN----KEPSF 266
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 85/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 11 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 162
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R D GT+ Y GR + DL SL L G+ P++
Sbjct: 163 -----RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 101
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 217
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 218 CSRYYRAPELIFGATDYTS 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 79
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 139
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 196 CSRYYRAPELIFGATDYTS 214
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 71
Query: 190 NALGGSHGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G+ Y +V+D + +++ V ++ T+ + V
Sbjct: 72 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 131
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 187
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 188 CSRYYRAPELIFGATDYTS 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 211 YVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLG 270
Y+++ + G +L D+ + + IA +A L H G +H DVKP N L+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQALNFSHQNGIIHRDVKPANILIS 150
Query: 271 PPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRD 330
+ +VD G+A DS G V Q V GT +Y S G + R
Sbjct: 151 A-----TNAVKVVDFGIARAIADS--GNSVX--QTAAVI-GTAQYLSPEQARGDSVDARS 200
Query: 331 DLESLAYTLIFLLRGRLPWQG 351
D+ SL L +L G P+ G
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTG 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQGKAFKNR-----------ELQIM 67
Query: 190 NALGGSHGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G+ Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA---TRWRDSSTGQ 298
+ L +HS G H D+KP+N LL PD L L D G A R + +
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 299 HVEYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 36 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 88 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 137
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + H
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSV---------H 183
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 184 APSSRRDDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 67
Query: 190 NALGGSHGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G+ Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 80
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 81 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 140
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 141 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 196
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 197 CSRYYRAPELIFGATDYTS 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 95
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 96 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 155
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 211
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 212 CSRYYRAPELIFGATDYTS 230
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + + +G+G FG+V + R A+++ KFE + +E +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVY------AMKLLSKFEMIKRSDSAFF--WEERDI 122
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
A S V ++ + + Y MVM+ M G L ++ +N + + + E +
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLA 180
Query: 249 LEKMHSRGYVHGDVKPENFLL 269
L+ +HS G++H DVKP+N LL
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLL 201
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 72
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 73 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 132
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 188
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 189 CSRYYRAPELIFGATDYTS 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 11 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + H
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSV---------H 158
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 159 APSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 198 VPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRG 256
+ ++HF + +Y +VM+ +G L + + + EM E + ++ +H G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 257 YVHGDVKPENFLL 269
YVH D+KP+N LL
Sbjct: 183 YVHRDIKPDNILL 195
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQDKRFKNR-----------ELQIM 101
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 217
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 218 CSRYYRAPELIFGATDYTS 236
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
++++ I + S L +H++G H D+KPENFL ++ + K LVD GL+ + +
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK---LVDFGLSKEFYKLN 224
Query: 296 TGQH--------VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRL 347
G++ Y P+V T + + D S L LL G +
Sbjct: 225 NGEYYGMTTKAGTPYFVAPEVLNTT----------NESYGPKCDAWSAGVLLHLLLMGAV 274
Query: 348 PWQGYQGENKGFLVCKKKMA 367
P+ G + V KK+
Sbjct: 275 PFPGVNDADTISQVLNKKLC 294
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + + +G+G FG+V + R A+++ KFE K + +E +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVY------AMKLLSKFEM--IKRSDSAFFWEERDI 127
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
A S V ++ + + Y MVM+ M G L ++ +N + + + E +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLA 185
Query: 249 LEKMHSRGYVHGDVKPENFLL 269
L+ +HS G++H DVKP+N LL
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLL 206
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQGKAFKNR-----------ELQIM 67
Query: 190 NALGGSHGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G+ Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V F++R E Q+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKL---CDSGELVAIKKVLQGKAFKNR-----------ELQIM 67
Query: 190 NALGGSHGVPRVHFKGRQGD-----YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G+ Y +V+D + +++ V ++ T+ + V
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 184 CSRYYRAPELIFGATDYTS 202
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 103
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 104 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 163
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 219
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 220 CSRYYRAPELIFGATDYTS 238
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + + +G+G FG+V + R A+++ KFE + +E +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVY------AMKLLSKFEMIKRSDSAFF--WEERDI 127
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
A S V ++ + + Y MVM+ M G L ++ +N + + + E +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLA 185
Query: 249 LEKMHSRGYVHGDVKPENFLL 269
L+ +HS G++H DVKP+N LL
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLL 206
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 105
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 106 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 165
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 221
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 222 CSRYYRAPELIFGATDYTS 240
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 29/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNALGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
+ L + R++ F Y ++ LG ++ + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
+ L HS+ +H D+KPEN LLG +L + D G + H +R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSV---------HAPSSRRT 164
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 165 DLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + H
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSV---------H 157
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 158 APSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +G G FG VY + ++ E V +F++R E Q+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLC---DSGELVAIKKVLQDKRFKNR-----------ELQIM 146
Query: 190 NALGGSHGVPRVHF---KGRQGD--YYVMVMDMLGPSLWDV---WNNNSHTMSIEMVACI 241
L + V +F G + D Y +V+D + +++ V ++ T+ + V
Sbjct: 147 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 206
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW-RDSSTGQHV 300
+ L +HS G H D+KP+N LL PD L L D G A + R ++
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRGEPNVSYI 262
Query: 301 --EYDQRPDVFRGTVRYAS 317
Y + P++ G Y S
Sbjct: 263 CSRYYRAPELIFGATDYTS 281
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 88/232 (37%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + + A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 116
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + H
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSV---------H 162
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 163 APSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 136 LGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSS--KGCNYGPPYEWQVYNALG 193
LG+G F VY R NTN+ + K HRS G N E ++ L
Sbjct: 18 LGEGQFATVYKARD---KNTNQIVAIKKI----KLGHRSEAKDGINRTALREIKLLQELS 70
Query: 194 GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMH 253
+ + + G + + +V D + L + +NS ++ + + + LE +H
Sbjct: 71 HPNIIGLLDAFGHKSNIS-LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 254 SRGYVHGDVKPENFLLGPPETPDEKKLF-LVDLGLATRW 291
+H D+KP N LL DE + L D GLA +
Sbjct: 130 QHWILHRDLKPNNLLL------DENGVLKLADFGLAKSF 162
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 85/233 (36%), Gaps = 43/233 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R ER + + + F+ + K G + E ++
Sbjct: 14 FDIGRPLGKGKFGNVYLAR--------ERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE----------QRTA 115
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SNGELKIADFGWSVHAPSS----- 165
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 352
R D GT+ Y GR + DL SL L G P++ +
Sbjct: 166 -----RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 86/239 (35%), Gaps = 55/239 (23%)
Query: 130 YRIDRKLGKGGFGQVY--------------VGRRIGPTNTNERTGPGAVEVALKFEHRSS 175
Y I LGKG FG+V V + N + T VE+ K +H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--- 80
Query: 176 KGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSI 235
P +++ L S +Y++ G L+D S
Sbjct: 81 -------PNIMKLFEILEDS------------SSFYIVGELYTGGELFDEIIKRKR-FSE 120
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
A I + S + MH VH D+KPEN LL E + K ++D GL+T ++ ++
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLSTCFQQNT 178
Query: 296 TGQH---VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+ Y P+V RGT + D+ S L LL G P+ G
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTY-------------DEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 86/239 (35%), Gaps = 55/239 (23%)
Query: 130 YRIDRKLGKGGFGQVY--------------VGRRIGPTNTNERTGPGAVEVALKFEHRSS 175
Y I LGKG FG+V V + N + T VE+ K +H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--- 80
Query: 176 KGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSI 235
P +++ L S +Y++ G L+D S
Sbjct: 81 -------PNIMKLFEILEDS------------SSFYIVGELYTGGELFDEIIKRKR-FSE 120
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
A I + S + MH VH D+KPEN LL E + K ++D GL+T ++ ++
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLSTCFQQNT 178
Query: 296 TGQH---VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+ Y P+V RGT + D+ S L LL G P+ G
Sbjct: 179 KMKDRIGTAYYIAPEVLRGTY-------------DEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + H
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSV---------H 160
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+R D+ GT+ Y GR + DL SL L G+ P++
Sbjct: 161 APSSRRDDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 36 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 137
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 187
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 188 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 27 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 78
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 79 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 128
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 178
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 179 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 133 DRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNAL 192
D+ LG+G F + R+ +N+ AV++ SK E
Sbjct: 16 DKPLGEGSFS---ICRKCVHKKSNQ---AFAVKII-------SKRMEANTQKEITALKLC 62
Query: 193 GGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEK 251
G + ++H + +VM++L G L++ H E + I + +S +
Sbjct: 63 EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETE-ASYIMRKLVSAVSH 121
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP-DVFR 310
MH G VH D+KPEN L + D ++ ++D G A R + D +P
Sbjct: 122 MHDVGVVHRDLKPENLLF--TDENDNLEIKIIDFGFA-RLKPP--------DNQPLKTPC 170
Query: 311 GTVRYASVHAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 352
T+ YA+ L + G DL SL L +L G++P+Q +
Sbjct: 171 FTLHYAAPEL-LNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 42/200 (21%)
Query: 130 YRIDRKLGKGGFGQVY--------------VGRRIGPTNTNERTGPGAVEVALKFEHRSS 175
Y I LGKG FG+V V + N + T VE+ K +H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH--- 80
Query: 176 KGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSI 235
P +++ L S V G+ Y G L+D S
Sbjct: 81 -------PNIMKLFEILEDSSSFYIV------GELYT------GGELFDEIIKRKR-FSE 120
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
A I + S + MH VH D+KPEN LL E + K ++D GL+T ++ ++
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK--IIDFGLSTCFQQNT 178
Query: 296 TGQH---VEYDQRPDVFRGT 312
+ Y P+V RGT
Sbjct: 179 KMKDRIGTAYYIAPEVLRGT 198
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 86/225 (38%), Gaps = 20/225 (8%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S Y+ R LGKG FG+V + + ++ TG + K E
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCK-------DKITGQECAVKVISKRQVKQKTDKESLLREV 77
Query: 187 QVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
Q+ L + F +G +Y++ G L+D + ++ A I + +
Sbjct: 78 QLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD-AARIIRQVL 136
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
S + H VH D+KPEN LL + + ++D GL+T H E ++
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLL--ESKSKDANIRIIDFGLST---------HFEASKKX 185
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT Y + G T + D+ S L LL G P+ G
Sbjct: 186 KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 11 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + + A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 112
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSCHAPSS----- 162
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 163 -----RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + +T D G
Sbjct: 127 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTS------VVKDSQVG 174
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 175 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 211 YVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLG 270
Y+++ + G +L D+ + + IA +A L H G +H DVKP N ++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 271 PPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRD 330
+ ++D G+A DS G V Q V GT +Y S G + R
Sbjct: 151 A-----TNAVKVMDFGIARAIADS--GNSVT--QTAAVI-GTAQYLSPEQARGDSVDARS 200
Query: 331 DLESLAYTLIFLLRGRLPWQG 351
D+ SL L +L G P+ G
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 211 YVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLG 270
Y+++ + G +L D+ + + IA +A L H G +H DVKP N ++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 271 PPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRD 330
+ ++D G+A DS G V Q V GT +Y S G + R
Sbjct: 151 A-----TNAVKVMDFGIARAIADS--GNSVT--QTAAVI-GTAQYLSPEQARGDSVDARS 200
Query: 331 DLESLAYTLIFLLRGRLPWQG 351
D+ SL L +L G P+ G
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTG 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 206 RQGDYYVMVMDMLGPSLWDVWN---NNSHTMSIEMVACIAIEAISILEKMHSR-GYVHGD 261
R+GD ++ M+++ SL + + T+ +++ IA+ + LE +HS+ +H D
Sbjct: 121 REGDVWI-CMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD 179
Query: 262 VKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAH 321
VKP N L+ ++ + D G++ D S + ++ +P + R ++
Sbjct: 180 VKPSNVLINA-----LGQVKMCDFGISGYLVD-SVAKTIDAGCKP--YMAPER---INPE 228
Query: 322 LGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 352
L + G S + D+ SL T+I L R P+ +
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 211 YVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLG 270
Y+++ + G +L D+ + + IA +A L H G +H DVKP N ++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 271 PPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRD 330
+ ++D G+A DS G V Q V GT +Y S G + R
Sbjct: 151 A-----TNAVKVMDFGIARAIADS--GNSVT--QTAAVI-GTAQYLSPEQARGDSVDARS 200
Query: 331 DLESLAYTLIFLLRGRLPWQG 351
D+ SL L +L G P+ G
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTG 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + +T D G
Sbjct: 171 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTS------VVKDSQVG 218
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
Query: 211 YVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLG 270
Y+++ + G +L D+ + + IA +A L H G +H DVKP N ++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 271 PPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRD 330
+ ++D G+A DS G V Q V GT +Y S G + R
Sbjct: 151 A-----TNAVKVMDFGIARAIADS--GNSVT--QTAAVI-GTAQYLSPEQARGDSVDARS 200
Query: 331 DLESLAYTLIFLLRGRLPWQG 351
D+ SL L +L G P+ G
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTG 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 87/232 (37%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + H
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSV---------H 157
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+R ++ GT+ Y GR + DL SL L G+ P++
Sbjct: 158 APSSRRTELC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 114
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 164
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 165 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + +T D G
Sbjct: 124 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTS------VVKDSQVG 171
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 116
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 166
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 167 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + R +G+GGFG+VY R+ +T + ++ +K + + N ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRK---ADTGKMYAMKCLDKKRIKMKQGETLALNE------RI 241
Query: 189 YNALGGSHGVPRV---HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEA 245
+L + P + + D ++D++ + S + A E
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 246 ISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD----SSTGQHVE 301
I LE MH+R V+ D+KP N LL + + + DLGLA + +S G H
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLD-----EHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 357 --MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + R +G+GGFG+VY R+ +T + ++ +K + + N ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRK---ADTGKMYAMKCLDKKRIKMKQGETLALNE------RI 241
Query: 189 YNALGGSHGVPRV---HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEA 245
+L + P + + D ++D++ + S + A E
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 246 ISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD----SSTGQHVE 301
I LE MH+R V+ D+KP N LL + + + DLGLA + +S G H
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLD-----EHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 357 --MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + + A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 116
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 166
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 167 -----RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 210 YYVMVMDML-GPSLWD------VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDV 262
+Y +VM ++ G L+D V+ ++ I+ V +S ++ +H G VH D+
Sbjct: 80 HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV-------LSAVKYLHENGIVHRDL 132
Query: 263 KPENFLLGPPETPDEKKLFLVDLGLA 288
KPEN L PE + K+ + D GL+
Sbjct: 133 KPENLLYLTPE--ENSKIMITDFGLS 156
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + R +G+GGFG+VY R+ +T + ++ +K + + N ++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRK---ADTGKMYAMKCLDKKRIKMKQGETLALNE------RI 240
Query: 189 YNALGGSHGVPRV---HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEA 245
+L + P + + D ++D++ + S + A E
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 300
Query: 246 ISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD----SSTGQHVE 301
I LE MH+R V+ D+KP N LL + + + DLGLA + +S G H
Sbjct: 301 ILGLEHMHNRFVVYRDLKPANILLD-----EHGHVRISDLGLACDFSKKKPHASVGTHGY 355
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 356 --MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + +T D G
Sbjct: 123 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTS------VVKDSQVG 170
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 171 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + +T D G
Sbjct: 143 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTS------VVKDSQVG 190
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 206 RQGDYYVMVMDMLGPSLWDVWN---NNSHTMSIEMVACIAIEAISILEKMHSR-GYVHGD 261
R+GD ++ M+++ SL + + T+ +++ IA+ + LE +HS+ +H D
Sbjct: 77 REGDVWI-CMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRD 135
Query: 262 VKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS---V 318
VKP N L+ ++ + D G++ D D D+ G Y + +
Sbjct: 136 VKPSNVLINA-----LGQVKMCDFGISGYLVD---------DVAKDIDAGCKPYMAPERI 181
Query: 319 HAHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 352
+ L + G S + D+ SL T+I L R P+ +
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + +T D G
Sbjct: 171 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTS------VVKDSQVG 218
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 111
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 161
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 162 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 211 YVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLG 270
Y+++ + G +L D+ + + IA +A L H G +H DVKP N ++
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA-DACQALNFSHQNGIIHRDVKPANIMIS 167
Query: 271 PPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRD 330
+ ++D G+A DS Q V GT +Y S G + R
Sbjct: 168 A-----TNAVKVMDFGIARAIADSGN----SVTQTAAVI-GTAQYLSPEQARGDSVDARS 217
Query: 331 DLESLAYTLIFLLRGRLPWQG 351
D+ SL L +L G P+ G
Sbjct: 218 DVYSLGCVLYEVLTGEPPFTG 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVA-LKFEHRSSKGCNYGPPYEWQV 188
+ + R +G+GGFG+VY R+ +T + ++ +K + + N ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRK---ADTGKMYAMKCLDKKRIKMKQGETLALNE------RI 241
Query: 189 YNALGGSHGVPRV---HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEA 245
+L + P + + D ++D++ + S + A E
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 246 ISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD----SSTGQHVE 301
I LE MH+R V+ D+KP N LL + + + DLGLA + +S G H
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLD-----EHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
P+V + V Y S D SL L LLRG P++ ++ ++K
Sbjct: 357 --MAPEVLQKGVAYDS-----------SADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 86/224 (38%), Gaps = 27/224 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+ I R LGKG FG VY+ R +R A++V K + + G + E ++
Sbjct: 7 FEIGRPLGKGKFGNVYLARE------KQRKFILALKVLFKAQLEKA-GVEHQLRREVEIQ 59
Query: 190 NALGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + R++ F Y ++ LG ++ + + A E +
Sbjct: 60 SHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELAN 116
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
L HS+ +H D+KPEN LLG +L + D G + S R
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----------RRT 161
Query: 308 VFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT+ Y GR + DL SL L G+ P++
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 25/240 (10%)
Query: 129 VYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQV 188
++ + +G G +GQVY GR + T + ++V E + N Y
Sbjct: 25 IFELVELVGNGTYGQVYKGRHV---KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH-- 79
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDMLGP-SLWD-VWNNNSHTMSIEMVACIAIEAI 246
+ + +G D +VM+ G S+ D + N +T+ E +A I E +
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
L +H +H D+K +N LL + ++ LVD G++ + D + G R
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLT-----ENAEVKLVDFGVSAQL-DRTVG-------RR 186
Query: 307 DVFRGTVRYA-----SVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLV 361
+ F GT + + + T + DL SL T I + G P FL+
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 16/221 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+ I + +G+G FG+V V + ER + + R+ C E +
Sbjct: 76 FEIIKVIGRGAFGEVAVVK----MKNTERIYAMKILNKWEMLKRAETACFR----EERDV 127
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
G + +H+ + ++ +VMD +G L + + + +M E +
Sbjct: 128 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 187
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDV 308
++ +H YVH D+KP+N LL + L D G + D T Q PD
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDV-----NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 242
Query: 309 FRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
+ A + +G+ G D SL + +L G P+
Sbjct: 243 ISPEILQA-MEDGMGKYGPEC-DWWSLGVCMYEMLYGETPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 16/221 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+ I + +G+G FG+V V + ER + + R+ C E +
Sbjct: 92 FEIIKVIGRGAFGEVAVVK----MKNTERIYAMKILNKWEMLKRAETACFR----EERDV 143
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
G + +H+ + ++ +VMD +G L + + + +M E +
Sbjct: 144 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 203
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDV 308
++ +H YVH D+KP+N LL + L D G + D T Q PD
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDV-----NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDY 258
Query: 309 FRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
+ A + +G+ G D SL + +L G P+
Sbjct: 259 ISPEILQA-MEDGMGKYGPEC-DWWSLGVCMYEMLYGETPF 297
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 238 VACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+A + E + L+ +HS +H D+K N LL E D K L D G+A G
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLS--EQGDVK---LADFGVA--------G 168
Query: 298 QHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENK 357
Q + + + F GT + + + D+ SL T I L +G P
Sbjct: 169 QLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV 228
Query: 358 GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVN 390
FL+ K +P TL + F+ F++ +N
Sbjct: 229 LFLIPK----NNPPTLVGDFTKSFKEFIDACLN 257
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 227 NNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGP--PETPDEKK----L 280
N M +V A+ + ++E++H +HGD+KP+NF+LG E DE L
Sbjct: 163 NTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGL 222
Query: 281 FLVDLG 286
L+DLG
Sbjct: 223 ALIDLG 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 29/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNALGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
+ L + R++ F Y ++ LG ++ + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
+ L HS+ +H D+KPEN LLG +L + D G + S R
Sbjct: 119 NALSYCHSKKVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----------RR 163
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT+ Y GR + DL SL L G+ P++
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 12 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 64 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 113
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 163
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 164 -----RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 164
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 165 -----RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 29/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 9 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 189 YNALGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
+ L + R++ F Y ++ LG ++ + + A E
Sbjct: 61 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELA 117
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
+ L HS+ +H D+KPEN LLG +L + D G + S R
Sbjct: 118 NALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----------RR 162
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT+ Y GR + DL SL L G+ P++
Sbjct: 163 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 114
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 164
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 165 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 39 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 77
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 78 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 134
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 135 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRW----S 185
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 186 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVGP 412
++ F+V + ++ + CP+ + + + K DE P + + ++ + +
Sbjct: 241 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 300
Query: 413 NPDI 416
P I
Sbjct: 301 LPKI 304
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 23/223 (10%)
Query: 102 SADKGAGAED------EGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNT 155
SAD G G E E A L + G + + + LG G +G+V++ R+I +T
Sbjct: 22 SADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDT 81
Query: 156 NERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVM 215
+ A++V K E QV + S + +H+ + +++
Sbjct: 82 GKLY---AMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138
Query: 216 DML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPET 274
D + G L+ + E+ + E + LE +H G ++ D+K EN LL
Sbjct: 139 DYINGGELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHKLGIIYRDIKLENILLDS--- 194
Query: 275 PDEKKLFLVDLGLATRWRDSSTGQ------HVEYDQRPDVFRG 311
+ L D GL+ + T + +EY PD+ RG
Sbjct: 195 --NGHVVLTDFGLSKEFVADETERAYDFCGTIEY-MAPDIVRG 234
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+ +S LE +H R ++ D+KPEN LL D+ + + DLGLA + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 357
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+ +S LE +H R ++ D+KPEN LL D+ + + DLGLA + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 357
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+ +S LE +H R ++ D+KPEN LL D+ + + DLGLA + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 357
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 58
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ + P L+D + E+
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELAR 117
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 172
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 173 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 219
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 220 IIRGQVFFRQRVSSECQHLIRWC 242
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 32 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 70
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 71 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 127
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 128 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATEKSRW----S 178
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 179 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVGP 412
++ F+V + ++ + CP+ + + + K DE P + + ++ + +
Sbjct: 234 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 293
Query: 413 NPDI 416
P I
Sbjct: 294 LPKI 297
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYD 303
+ +S LE +H R ++ D+KPEN LL D+ + + DLGLA + T
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLD-----DDGNVRISDLGLAVELKAGQT------- 344
Query: 304 QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW--QGYQGENK 357
+ + GT + + LG D +L TL ++ R P+ +G + ENK
Sbjct: 345 -KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 14 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + + A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 115
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 165
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 166 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 40 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 78
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 79 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 135
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRW----S 186
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 187 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVGP 412
++ F+V + ++ + CP+ + + + K DE P + + ++ + +
Sbjct: 242 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
Query: 413 NPDI 416
P I
Sbjct: 302 LPKI 305
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 84/233 (36%), Gaps = 43/233 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R ER + + + F+ + K G + E ++
Sbjct: 14 FDIGRPLGKGKFGNVYLAR--------ERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE----------QRTA 115
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SNGELKIADFGWSVHAPSS----- 165
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGY 352
R GT+ Y GR + DL SL L G P++ +
Sbjct: 166 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 40 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 78
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 79 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 135
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATEKSRW----S 186
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 187 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVGP 412
++ F+V + ++ + CP+ + + + K DE P + + ++ + +
Sbjct: 242 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
Query: 413 NPDI 416
P I
Sbjct: 302 LPKI 305
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 29/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNALGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
+ L + R++ F Y ++ LG ++ + A E
Sbjct: 62 QSHLRHP-NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELA 118
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
+ L HS+ +H D+KPEN LLG +L + D G + S R
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----------RR 163
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
GT+ Y GR + DL SL L G+ P++
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 30/177 (16%)
Query: 104 DKGAGAEDEGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQV----------YVGRRIGPT 153
+ G +D+GS +P + Y + + +GKG FGQV +V ++
Sbjct: 76 NNGGYDDDQGSYVQVPHD---HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKM--V 130
Query: 154 NTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVM 213
+R A E EH + + N + H + F+ ++ M
Sbjct: 131 RNEKRFHRQAAEEIRILEHLRKQDKD----------NTMNVIHMLENFTFR----NHICM 176
Query: 214 VMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL 269
++L +L+++ N S+ +V A + L+ +H +H D+KPEN LL
Sbjct: 177 TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 119 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 163
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 223
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 224 TYLNPWKKIDSAPLAL 239
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 121 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 165
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 226 TYLNPWKKIDSAPLAL 241
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 49/235 (20%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 189 YNAL---------GGSHGVPRVHF---KGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIE 236
+ L G H RV+ +G+ Y + + S +D +
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL---SKFDE----------Q 113
Query: 237 MVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSST 296
A E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS-- 166
Query: 297 GQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 167 --------RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 49/235 (20%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 15 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 189 YNAL---------GGSHGVPRVHF---KGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIE 236
+ L G H RV+ +G+ Y + + S +D +
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL---SKFDE----------Q 113
Query: 237 MVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSST 296
A E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS-- 166
Query: 297 GQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 167 --------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+H G H D+KPEN LL DE+ L + D GLAT +R Y+ R +
Sbjct: 120 LHGIGITHRDIKPENLLL------DERDNLKISDFGLATVFR---------YNNRERLLN 164
Query: 311 ---GTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW-------QGYQG--ENK 357
GT+ Y + R + D+ S L +L G LPW Q Y E K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
Query: 358 GFLVCKKKMATSPETL 373
+L KK+ ++P L
Sbjct: 225 TYLNPWKKIDSAPLAL 240
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 30/177 (16%)
Query: 104 DKGAGAEDEGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQV----------YVGRRIGPT 153
+ G +D+GS +P + Y + + +GKG FGQV +V ++
Sbjct: 76 NNGGYDDDQGSYVQVPHD---HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKM--V 130
Query: 154 NTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVM 213
+R A E EH + + N + H + F+ ++ M
Sbjct: 131 RNEKRFHRQAAEEIRILEHLRKQDKD----------NTMNVIHMLENFTFR----NHICM 176
Query: 214 VMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL 269
++L +L+++ N S+ +V A + L+ +H +H D+KPEN LL
Sbjct: 177 TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 17 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 55
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 56 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 112
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRW----S 163
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 164 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVGP 412
++ F+V + ++ + CP+ + + + K DE P + + ++ + +
Sbjct: 219 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
Query: 413 NPDI 416
P I
Sbjct: 279 LPKI 282
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 14 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 52
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 53 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 109
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 110 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRW----S 160
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 161 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVGP 412
++ F+V + ++ + CP+ + + + K DE P + + ++ + +
Sbjct: 216 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 275
Query: 413 NPDI 416
P I
Sbjct: 276 LPKI 279
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + + +G+G FG+V + R A+++ KFE + +E +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVY------AMKLLSKFEMIKRSDSAFF--WEERDI 128
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMD-MLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
A S V ++ + Y MVM+ M G L ++ +N + + + E +
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLA 186
Query: 249 LEKMHSRGYVHGDVKPENFLL 269
L+ +HS G +H DVKP+N LL
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLL 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYN- 190
+ +++G G FG VY G+ G +VA+K + ++ P + Q +
Sbjct: 28 VGQRIGSGSFGTVYKGKWHG-------------DVAVKMLNVTAP-----TPQQLQAFKN 69
Query: 191 ---ALGGSHGVPRVHFKGRQGDYYVMVMDML--GPSLWDVWNNNSHTMSIEMVACIAIEA 245
L + V + F G + ++ G SL+ + + ++ + IA +
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 246 ISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSSTGQHVEY 302
++ +H++ +H D+K N L T + + D GLAT RW +G H ++
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNT-----VKIGDFGLATEKSRW----SGSH-QF 179
Query: 303 DQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF 359
+Q G++ + + + S + D+ + L L+ G+LP+ ++
Sbjct: 180 EQ----LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 235
Query: 360 -LVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYIS 404
+V + ++ + CP+ + + + K DE P++ + ++
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 85/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + + A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYRELQKLSK--FDEQRTA 111
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 161
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 162 -----RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 96/239 (40%), Gaps = 39/239 (16%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAV---------EVALKFEHRSSKGCNY 180
+ + + LGKG FG+V++ TN+ A+ +V + +
Sbjct: 20 FELHKMLGKGSFGKVFLAEF---KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 181 GPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVAC 240
P+ ++ F+ ++ ++VM G ++ + + H +
Sbjct: 77 EHPFLTHMFCT-----------FQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATF 123
Query: 241 IAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHV 300
A E I L+ +HS+G V+ D+K +N LL + + + D G+ +++ G
Sbjct: 124 YAAEIILGLQFLHSKGIVYRDLKLDNILLDK-----DGHIKIADFGMC---KENMLG--- 172
Query: 301 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF 359
D + + F GT Y + LG+ + D S L +L G+ P+ G Q E + F
Sbjct: 173 --DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELF 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLG 286
LE +H++GY H D+KP N LLG DE + L+DLG
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLG-----DEGQPVLMDLG 179
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYN- 190
+ +++G G FG VY G+ G +VA+K + ++ P + Q +
Sbjct: 16 VGQRIGSGSFGTVYKGKWHG-------------DVAVKMLNVTAP-----TPQQLQAFKN 57
Query: 191 ---ALGGSHGVPRVHFKGRQGDYYVMVMDML--GPSLWDVWNNNSHTMSIEMVACIAIEA 245
L + V + F G + ++ G SL+ + + ++ + IA +
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 117
Query: 246 ISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSSTGQHVEY 302
++ +H++ +H D+K N L T + + D GLAT RW +G H ++
Sbjct: 118 ARGMDYLHAKSIIHRDLKSNNIFLHEDNT-----VKIGDFGLATVKSRW----SGSH-QF 167
Query: 303 DQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF 359
+Q G++ + + + S + D+ + L L+ G+LP+ ++
Sbjct: 168 EQ----LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 223
Query: 360 -LVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYIS 404
+V + ++ + CP+ + + + K DE P++ + ++
Sbjct: 224 EMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 164
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 165 -----RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 219 GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEK 278
G SL+ + + ++ + IA + ++ +H++ +H D+K N L T
Sbjct: 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---- 158
Query: 279 KLFLVDLGLAT---RWRDSSTGQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDL 332
+ + D GLAT RW +G H +++Q G++ + + + S + D+
Sbjct: 159 -VKIGDFGLATEKSRW----SGSH-QFEQ----LSGSILWMAPEVIRMQDSNPYSFQSDV 208
Query: 333 ESLAYTLIFLLRGRLPWQGYQGENKGF-LVCKKKMATSPETLCCFCPQPFRLFVEYVVNL 391
+ L L+ G+LP+ ++ +V + ++ + CP+ + + +
Sbjct: 209 YAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKK 268
Query: 392 KFDEEPNYAKYIS 404
K DE P++ + ++
Sbjct: 269 KRDERPSFPRILA 281
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 243 IEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEY 302
+E + L +HS G V+ D+KPEN +L E++L L+DLG +R
Sbjct: 189 LEILPALSYLHSIGLVYNDLKPENIML------TEEQLKLIDLGAVSRINSFGYLYGTPG 242
Query: 303 DQRPDVFRGTVRYASVHAHLGRT 325
Q P++ R A+ +GRT
Sbjct: 243 FQAPEIVRTGPTVATDIYTVGRT 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 10 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV Y ++ LG ++ + A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRV--------YLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + D G + S
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIADFGWSVHAPSS----- 161
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 162 -----RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 96/239 (40%), Gaps = 39/239 (16%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAV---------EVALKFEHRSSKGCNY 180
+ + + LGKG FG+V++ TN+ A+ +V + +
Sbjct: 19 FILHKMLGKGSFGKVFLAEF---KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 181 GPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVAC 240
P+ ++ F+ ++ ++VM G ++ + + H +
Sbjct: 76 EHPFLTHMFCT-----------FQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATF 122
Query: 241 IAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHV 300
A E I L+ +HS+G V+ D+K +N LL + + + D G+ +++ G
Sbjct: 123 YAAEIILGLQFLHSKGIVYRDLKLDNILLDK-----DGHIKIADFGMC---KENMLG--- 171
Query: 301 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF 359
D + + F GT Y + LG+ + D S L +L G+ P+ G Q E + F
Sbjct: 172 --DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELF 227
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 12 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 113
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + + G + S
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIANFGWSVHAPSS----- 163
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 164 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 30/177 (16%)
Query: 104 DKGAGAEDEGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQV----------YVGRRIGPT 153
+ G +D+GS +P + Y + + +GKG FGQV +V ++
Sbjct: 76 NNGGYDDDQGSYVQVPHD---HVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKM--V 130
Query: 154 NTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVM 213
+R A E EH + + N + H + F+ ++ M
Sbjct: 131 RNEKRFHRQAAEEIRILEHLRKQDKD----------NTMNVIHMLENFTFR----NHICM 176
Query: 214 VMDMLGPSLWDVWNNNS-HTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL 269
++L +L+++ N S+ +V A + L+ +H +H D+KPEN LL
Sbjct: 177 TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 57/292 (19%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 12 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 50
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 51 FKNEVGVLR---KTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 107
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRW----S 158
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 159 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYIS 404
++ F+V + ++ + CP+ + + + K DE P + + ++
Sbjct: 214 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 28/231 (12%)
Query: 125 GGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSS--KGCNYGP 182
G S Y+ +KLG G +G+V + + ++ TG E A+K +SS N G
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCK-------DKLTG---AERAIKIIKKSSVTTTSNSGA 67
Query: 183 PY-EWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACI 241
E V L + + F + +YY+++ G L+D ++ A I
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD-AAVI 126
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLF-LVDLGLATRWRDSSTGQHV 300
+ +S +H VH D+KPEN LL E+ L +VD GL+ H
Sbjct: 127 MKQVLSGTTYLHKHNIVHRDLKPENLLL---ESKSRDALIKIVDFGLSA---------HF 174
Query: 301 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
E + GT Y + L + + D+ S L LL G P+ G
Sbjct: 175 EVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 224
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + +T D G
Sbjct: 171 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTS------VVKDSQVG 218
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
V Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 28/231 (12%)
Query: 125 GGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSS--KGCNYGP 182
G S Y+ +KLG G +G+V + + ++ TG E A+K +SS N G
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCK-------DKLTGA---ERAIKIIKKSSVTTTSNSGA 50
Query: 183 PY-EWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACI 241
E V L + + F + +YY+++ G L+D ++ A I
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD-AAVI 109
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLF-LVDLGLATRWRDSSTGQHV 300
+ +S +H VH D+KPEN LL E+ L +VD GL+ H
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLL---ESKSRDALIKIVDFGLSA---------HF 157
Query: 301 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
E + GT Y + L + + D+ S L LL G P+ G
Sbjct: 158 EVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 13 FEIGRPLGKGKFGNVYLAR--------EKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 189 YNAL---------GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
+ L G H RV+ + ++ S +D + A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE----------QRTA 114
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
E + L HS+ +H D+KPEN LLG +L + + G + S
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLG-----SAGELKIANFGWSVHAPSS----- 164
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
R GT+ Y GR + DL SL L G+ P++
Sbjct: 165 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 57/292 (19%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 17 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 55
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 56 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 112
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRW----S 163
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 164 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYIS 404
++ F+V + ++ + CP+ + + + K DE P + + ++
Sbjct: 219 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 20/223 (8%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFE--HRSSKGCNYGPPYEWQ 187
+ I + +G+G FG+V V + N ++ A+++ K+E R+ C E +
Sbjct: 76 FEILKVIGRGAFGEVAV---VKLKNADKVF---AMKILNKWEMLKRAETACFR----EER 125
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDM-LGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
G S + +H+ + + +VMD +G L + + + EM E +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
++ +H YVH D+KP+N L+ + L D G + + T Q P
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDM-----NGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
Query: 307 DVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
D + A + GR G D SL + +L G P+
Sbjct: 241 DYISPEILQA-MEGGKGRYGPEC-DWWSLGVCMYEMLYGETPF 281
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 57/292 (19%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 12 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 50
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 51 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 107
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATEKSRW----S 158
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 159 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYIS 404
++ F+V + ++ + CP+ + + + K DE P + + ++
Sbjct: 214 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 118/292 (40%), Gaps = 57/292 (19%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ +++G G FG VY G+ G +VA+K N P Q+ A
Sbjct: 12 VGQRIGSGSFGTVYKGKWHG-------------DVAVKM-------LNVTAPTPQQL-QA 50
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDV--WNNNS---HTMSI-----EMVACI 241
GV R K R + + + P L V W S H + I EM+ I
Sbjct: 51 FKNEVGVLR---KTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 107
Query: 242 AI--EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT---RWRDSST 296
I + ++ +H++ +H D+K N L ++ + + D GLAT RW +
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRW----S 158
Query: 297 GQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
G H +++Q G++ + + + S + D+ + L L+ G+LP+
Sbjct: 159 GSH-QFEQ----LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
Query: 354 GENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYIS 404
++ F+V + ++ + CP+ + + + K DE P + + ++
Sbjct: 214 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 84/225 (37%), Gaps = 30/225 (13%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +LGKG F V RR ++ TG +E A K + E +
Sbjct: 7 YDVKEELGKGAFSVV---RRC----VHKTTG---LEFAAKIINTKKLSARDFQKLEREAR 56
Query: 190 NALGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
H + R+H ++ ++ +V D++ G L++ + CI
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----Q 112
Query: 248 ILEKM---HSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQ 304
ILE + HS G VH ++KPEN LL K L D GLA DS
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--LADFGLAIEVNDSEAWHG----- 165
Query: 305 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
F GT Y S S+ D+ + L LL G P+
Sbjct: 166 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 58
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 117
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 172
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 173 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 219
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 220 IIRGQVFFRQRVSSECQHLIRWC 242
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 84/225 (37%), Gaps = 30/225 (13%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +LGKG F V RR ++ TG +E A K + E +
Sbjct: 8 YDVKEELGKGAFSVV---RRC----VHKTTG---LEFAAKIINTKKLSARDFQKLEREAR 57
Query: 190 NALGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
H + R+H ++ ++ +V D++ G L++ + CI
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----Q 113
Query: 248 ILEKM---HSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQ 304
ILE + HS G VH ++KPEN LL K L D GLA DS
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--LADFGLAIEVNDSEAWHG----- 166
Query: 305 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
F GT Y S S+ D+ + L LL G P+
Sbjct: 167 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 59
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 118
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 173
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 174 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 220
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 221 IIRGQVFFRQRVSSECQHLIRWC 243
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 57
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 58 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 116
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 117 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 171
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 172 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 218
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 219 IIRGQVFFRQRVSSECQHLIRWC 241
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 84/225 (37%), Gaps = 30/225 (13%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +LGKG F V RR ++ TG +E A K + E +
Sbjct: 8 YDVKEELGKGAFSVV---RRC----VHKTTG---LEFAAKIINTKKLSARDFQKLEREAR 57
Query: 190 NALGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
H + R+H ++ ++ +V D++ G L++ + CI
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----Q 113
Query: 248 ILEKM---HSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQ 304
ILE + HS G VH ++KPEN LL K L D GLA DS
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--LADFGLAIEVNDSEAWHG----- 166
Query: 305 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
F GT Y S S+ D+ + L LL G P+
Sbjct: 167 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 59
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 118
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 173
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 174 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 220
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 221 IIRGQVFFRQRVSSECQHLIRWC 243
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 267 FLLG 270
LLG
Sbjct: 147 ILLG 150
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 267 FLLG 270
LLG
Sbjct: 147 ILLG 150
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 59
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 118
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 173
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 174 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 220
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 221 IIRGQVFFRQRVSSECQHLIRWC 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ S +S E V + + + L+ +HS G +H D+KP N +
Sbjct: 110 LVTTLMGADLNNIVK--SQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN-- 165
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA + + TG
Sbjct: 166 ---EDSELRILDFGLARQADEEMTG 187
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 146
Query: 267 FLLG 270
LLG
Sbjct: 147 ILLG 150
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
GD +VM+ L G SL DV M +A + E + LE +HS +H D+K +N
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN 147
Query: 267 FLLG 270
LLG
Sbjct: 148 ILLG 151
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPE 265
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 220 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 266 NFLL 269
+ LL
Sbjct: 277 SILL 280
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 87/229 (37%), Gaps = 40/229 (17%)
Query: 136 LGKGGFGQV-----------YVGRRIGPTNTNERTGPGAVEVALKFEHRSS---KGCNYG 181
+G GGFGQV YV RR+ N V+ K +H + GC G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDG 76
Query: 182 PPYEWQVYN-ALGGSHGVPRVHFKGRQGDYYVMV--MDMLGPSLWDVWNNNSHTMSIEMV 238
Y+ + + +L S P + + M+ + W ++ V
Sbjct: 77 FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 136
Query: 239 ACIAIEAISILEK----MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDS 294
+A+E + K +HS+ +H D+KP N L D K++ + D GL T ++
Sbjct: 137 --LALELFEQITKGVDYIHSKKLIHRDLKPSNIFL-----VDTKQVKIGDFGLVTSLKN- 188
Query: 295 STGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLL 343
D + +GT+RY S + + DL +L L LL
Sbjct: 189 --------DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 108/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 54
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 113
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 114 SFFWQVLEAVRHCHNXGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 168
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 169 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 215
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + +++++ + L +C
Sbjct: 216 IIRGQVFFRQRVSXECQHLIRWC 238
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 54
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 113
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 114 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 168
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 169 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 215
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 216 IIRGQVFFRQRVSSECQHLIRWC 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 73
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 132
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 187
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 188 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 234
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 235 IIRGQVFFRQRVSSECQHLIRWC 257
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 23/110 (20%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRG 311
+H G VH D+KP NFL+ + L L+D G+A + + D G
Sbjct: 143 IHQHGIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDXXX------VVKDSQVG 190
Query: 312 TVRYASVHAHLGRTGSRRD-----------DLESLAYTLIFLLRGRLPWQ 350
TV Y A + SR + D+ SL L ++ G+ P+Q
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 74
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 133
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 188
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 189 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 235
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 236 IIRGQVFFRQRVSSECQHLIRWC 258
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 84/225 (37%), Gaps = 30/225 (13%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +LGKG F V RR ++ TG +E A K + E +
Sbjct: 31 YDVKEELGKGAFSVV---RRC----VHKTTG---LEFAAKIINTKKLSARDFQKLEREAR 80
Query: 190 NALGGSH-GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
H + R+H ++ ++ +V D++ G L++ + CI
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----Q 136
Query: 248 ILEKM---HSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQ 304
ILE + HS G VH ++KPEN LL K L D GLA DS
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVK--LADFGLAIEVNDSEAWHG----- 189
Query: 305 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
F GT Y S S+ D+ + L LL G P+
Sbjct: 190 ----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 104/266 (39%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y + S G KG G Y + P L ++M A
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL------PQL------------VDMAA 121
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 122 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 167
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 168 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQC 251
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 231 HTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
TM + ++ + + L +HS G H D+KP+N LL PP L L+D G A
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG----VLKLIDFGSA 189
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 239 ACIAIEAISILEKMHSRGYVHGDVKPENFLL--GPPETPDEKKLFLVDLGLATRWR 292
A I + +S + H H D+KPENFL P++P L L+D GLA R++
Sbjct: 126 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP----LKLIDFGLAARFK 177
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 101
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 160
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 215
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 216 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 262
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 263 IIRGQVFFRQRVSSECQHLIRWC 285
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 239 ACIAIEAISILEKMHSRGYVHGDVKPENFLL--GPPETPDEKKLFLVDLGLATRWR 292
A I + +S + H H D+KPENFL P++P L L+D GLA R++
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP----LKLIDFGLAARFK 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 86/225 (38%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHI-------LTGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL D + + D + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLL--------------DADMNIKIADFGFSNEFTFGNKLD 170
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 86
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 145
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 200
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 201 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 247
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 248 IIRGQVFFRQRVSSECQHLIRWC 270
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPE 265
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 143 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 266 NFLL 269
+ LL
Sbjct: 200 SILL 203
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 86/225 (38%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHI-------LTGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL D + + D + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLL--------------DADMNIKIADFGFSNEFTFGNKLD 170
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 45/263 (17%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGP------- 182
Y++ LG GGFG VY G R+ + VA+K + + ++G
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDN----------LPVAIKHVEKD-RISDWGELPNGTRV 93
Query: 183 PYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVA 239
P E + + G GV R+ + D +V++++ P L+D + E+
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 152
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
+ + + H+ G +H D+K EN L+ + +L L+D G +D+
Sbjct: 153 SFFWQVLEAVRHCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD- 207
Query: 300 VEYDQRPDVFRGTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQG 354
F GT Y+ H + GR+ + + SL L ++ G +P++ +
Sbjct: 208 ---------FDGTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEE 254
Query: 355 ENKGFLVCKKKMATSPETLCCFC 377
+G + ++++++ + L +C
Sbjct: 255 IIRGQVFFRQRVSSECQHLIRWC 277
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 25 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 77
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N +GG + V + Q PSL + NN+ T++
Sbjct: 78 -----ILQNLMGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 124
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS+G +H DVKP N ++ +KKL L+D GLA
Sbjct: 140 ELLKALDYCHSKGIMHRDVKPHNVMID----HQQKKLRLIDWGLA 180
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 104/266 (39%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y + S G KG G Y + P L ++M A
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL------PQL------------VDMAA 121
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 122 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 167
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 168 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQC 251
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPE 265
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 100 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 266 NFLL 269
+ LL
Sbjct: 157 SILL 160
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 187
Y+I + LG+G FG+V + T T ++ VALK ++ +K G
Sbjct: 6 YQIVKTLGEGSFGKVKLAYH---TTTGQK-------VALKIINKKVLAKSDMQGRIEREI 55
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 56 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 114
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+E H VH D+KPEN LL + + + D GL+ D +
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTDGN 157
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPE 265
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 98 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 266 NFLL 269
+ LL
Sbjct: 155 SILL 158
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 213 MVMDML-GPSLWDVWNN-------NSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKP 264
+VM +L G S+ D+ + S + +A I E + LE +H G +H DVK
Sbjct: 85 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 265 ENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGR 324
N LLG ++ + + D G++ +TG + ++ F GT + +
Sbjct: 145 GNILLG-----EDGSVQIADFGVSAFL---ATGGDITRNKVRKTFVGTPCWMAPEVMEQV 196
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGY 352
G + D+ S T I L G P+ Y
Sbjct: 197 RGYDFKADIWSFGITAIELATGAAPYHKY 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 213 MVMDML-GPSLWDVWNN-------NSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKP 264
+VM +L G S+ D+ + S + +A I E + LE +H G +H DVK
Sbjct: 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 265 ENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGR 324
N LLG ++ + + D G++ +TG + ++ F GT + +
Sbjct: 150 GNILLG-----EDGSVQIADFGVSAFL---ATGGDITRNKVRKTFVGTPCWMAPEVMEQV 201
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGY 352
G + D+ S T I L G P+ Y
Sbjct: 202 RGYDFKADIWSFGITAIELATGAAPYHKY 230
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 187
Y+I + LG+G FG+V + T T ++ VALK ++ +K G
Sbjct: 15 YQIVKTLGEGSFGKVKLAYH---TTTGQK-------VALKIINKKVLAKSDMQGRIEREI 64
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 65 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 123
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+E H VH D+KPEN LL + + + D GL+ D +
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTDGN 166
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 187
Y+I + LG+G FG+V + T T ++ VALK ++ +K G
Sbjct: 16 YQIVKTLGEGSFGKVKLAYH---TTTGQK-------VALKIINKKVLAKSDMQGRIEREI 65
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 66 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 124
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+E H VH D+KPEN LL + + + D GL+ D +
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTDGN 167
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS+G +H DVKP N ++ +KKL L+D GLA
Sbjct: 145 ELLKALDYCHSKGIMHRDVKPHNVMID----HQQKKLRLIDWGLA 185
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 31/242 (12%)
Query: 116 APLPEKVQVGGSPV----YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFE 171
APL E V P Y R LGKGGF + Y I +T E V ++ +
Sbjct: 26 APLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITDMDTKEVFAGKVVPKSMLLK 82
Query: 172 -HRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNN 229
H+ K E ++ +L H V H D+ +V+++ SL ++
Sbjct: 83 PHQKEKMST-----EIAIHKSLDNPHVV-GFHGFFEDDDFVYVVLEICRRRSLLELHKRR 136
Query: 230 SHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT 289
E + + I ++ +H+ +H D+K N L D+ + + D GLAT
Sbjct: 137 KAVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN-----DDMDVKIGDFGLAT 190
Query: 290 RWRDSSTGQHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 348
+ +E+D +R GT Y + + S D+ SL L LL G+ P
Sbjct: 191 K---------IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
Query: 349 WQ 350
++
Sbjct: 242 FE 243
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPE 265
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 89 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 266 NFLL 269
+ LL
Sbjct: 146 SILL 149
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 136 LGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGS 195
LG G FGQV+ E T G A + R K E V N L +
Sbjct: 97 LGGGRFGQVH---------KCEETATGLKLAAKIIKTRGMKD-KEEVKNEISVMNQLDHA 146
Query: 196 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISI-LEKMH 253
+ + + D V+VM+ + G L+D + S+ ++ E+ + ++ I + MH
Sbjct: 147 NLIQLYDAFESKNDI-VLVMEYVDGGELFDRIIDESYNLT-ELDTILFMKQICEGIRHMH 204
Query: 254 SRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWR 292
+H D+KPEN L D K++ ++D GLA R++
Sbjct: 205 QMYILHLDLKPENILCV---NRDAKQIKIIDFGLARRYK 240
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRS--SKGCNYGPPYEWQ 187
Y+I + LG+G FG+V + T T ++ VALK ++ +K G
Sbjct: 10 YQIVKTLGEGSFGKVKLAYH---TTTGQK-------VALKIINKKVLAKSDMQGRIEREI 59
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
Y L + +++ + D +MV++ G L+D + MS + + IS
Sbjct: 60 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIIS 118
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+E H VH D+KPEN LL + + + D GL+ D +
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLD-----EHLNVKIADFGLSNIMTDGN 161
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPE 265
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 93 GDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 266 NFLL 269
+ LL
Sbjct: 150 SILL 153
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 130 YRIDRKLGKGGFGQV----------YVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCN 179
Y ID +GKG FGQV +V +I N++ ++ ++ +K
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI---IKNKKAFLNQAQIEVRLLELMNKH-- 110
Query: 180 YGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVW-NNNSHTMSIEMV 238
E + Y H + R H +V +ML +L+D+ N N +S+ +
Sbjct: 111 ---DTEMKYYIVHLKRHFMFRNHL--------CLVFEMLSYNLYDLLRNTNFRGVSLNLT 159
Query: 239 ACIAIEAISILEKMHS--RGYVHGDVKPENFLLGPPETPDEKKLFLVDLG 286
A + + L + + +H D+KPEN LL P+ K +VD G
Sbjct: 160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIK---IVDFG 206
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 85/225 (37%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHI-------LTGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL D + + D + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLL--------------DADMNIKIADFGFSNEFTFGNKLD 170
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 31/242 (12%)
Query: 116 APLPEKVQVGGSPV----YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFE 171
APL E V P Y R LGKGGF + Y I +T E V ++ +
Sbjct: 26 APLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITDMDTKEVFAGKVVPKSMLLK 82
Query: 172 -HRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNN 229
H+ K E ++ +L H V H D+ +V+++ SL ++
Sbjct: 83 PHQKEKMST-----EIAIHKSLDNPHVV-GFHGFFEDDDFVYVVLEICRRRSLLELHKRR 136
Query: 230 SHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT 289
E + + I ++ +H+ +H D+K N L D+ + + D GLAT
Sbjct: 137 KAVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN-----DDMDVKIGDFGLAT 190
Query: 290 RWRDSSTGQHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 348
+ +E+D +R GT Y + + S D+ SL L LL G+ P
Sbjct: 191 K---------IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
Query: 349 WQ 350
++
Sbjct: 242 FE 243
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 69/185 (37%), Gaps = 34/185 (18%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S Y I LG+G FG+V + + G VA+K + C E
Sbjct: 13 SARYEIVDTLGEGAFGKVV-------ECIDHKAG--GRHVAVKIVKNVDRYCE-AARSEI 62
Query: 187 QVYNALGGSHGVPRVHFKGRQ-------GDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMV 238
QV L + P F+ Q + +V ++LG S +D N ++ +
Sbjct: 63 QVLEHLNTTD--PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 239 ACIAIEAISILEKMHSRGYVHGDVKPENFLL---------GPPETPDEKKLF-----LVD 284
+A + + +HS H D+KPEN L P DE+ L +VD
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 285 LGLAT 289
G AT
Sbjct: 181 FGSAT 185
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 239 ACIAIEAISILEK-------MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW 291
A + +E I++L++ +HS VH D+KP N L+ P + K + D GL +
Sbjct: 114 AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
Query: 292 RDSSTGQH 299
+ G+H
Sbjct: 174 ---AVGRH 178
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 130 YRIDRKLGKGGFGQV----------YVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCN 179
Y ID +GKG FGQV +V +I N++ ++ ++ +K
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI---IKNKKAFLNQAQIEVRLLELMNKH-- 110
Query: 180 YGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVW-NNNSHTMSIEMV 238
E + Y H + R H +V +ML +L+D+ N N +S+ +
Sbjct: 111 ---DTEMKYYIVHLKRHFMFRNHL--------CLVFEMLSYNLYDLLRNTNFRGVSLNLT 159
Query: 239 ACIAIEAISILEKMHS--RGYVHGDVKPENFLLGPPETPDEKKLFLVDLG 286
A + + L + + +H D+KPEN LL P+ K +VD G
Sbjct: 160 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIK---IVDFG 206
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 130 YRIDRKLGKGGFGQV----------YVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCN 179
Y ID +GKG FGQV +V +I N++ ++ ++ +K
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI---IKNKKAFLNQAQIEVRLLELMNKH-- 91
Query: 180 YGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVW-NNNSHTMSIEMV 238
E + Y H + R H +V +ML +L+D+ N N +S+ +
Sbjct: 92 ---DTEMKYYIVHLKRHFMFRNHL--------CLVFEMLSYNLYDLLRNTNFRGVSLNLT 140
Query: 239 ACIAIEAISILEKMHS--RGYVHGDVKPENFLLGPPETPDEKKLFLVDLG 286
A + + L + + +H D+KPEN LL P+ K +VD G
Sbjct: 141 RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIK---IVDFG 187
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 26 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 78
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 79 -----ILQNLCGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 125
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 126 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 174
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 103/266 (38%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y S G KG G Y + P L ++M A
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRL------PQL------------VDMAA 121
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 122 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 167
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 168 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQC 251
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 69/185 (37%), Gaps = 34/185 (18%)
Query: 127 SPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEW 186
S Y I LG+G FG+V + + G VA+K + C E
Sbjct: 13 SARYEIVDTLGEGAFGKVV-------ECIDHKAG--GRHVAVKIVKNVDRYCE-AARSEI 62
Query: 187 QVYNALGGSHGVPRVHFKGRQ-------GDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMV 238
QV L + P F+ Q + +V ++LG S +D N ++ +
Sbjct: 63 QVLEHLNTTD--PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHI 120
Query: 239 ACIAIEAISILEKMHSRGYVHGDVKPENFLL---------GPPETPDEKKLF-----LVD 284
+A + + +HS H D+KPEN L P DE+ L +VD
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 285 LGLAT 289
G AT
Sbjct: 181 FGSAT 185
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 25 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 77
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 78 -----ILQNLCGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 124
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ +S E V + + + L+ +HS G +H D+KP N +
Sbjct: 110 LVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN-- 165
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA + + TG
Sbjct: 166 ---EDSELRILDFGLARQADEEMTG 187
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 203 FKGRQGDYYVMVMDMLGPSLWD-VWNNNSHTMSIEMVACIAIEAISILEKMHSRG-YVHG 260
G G + MV ++LG L + +N + + V I + + L+ +HS+ +H
Sbjct: 106 ISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHT 165
Query: 261 DVKPENFLL 269
D+KPEN L+
Sbjct: 166 DIKPENILM 174
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA++ ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHI-------LTGK---EVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL D + + D + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLL--------------DADMNIKIADFGFSNEFTFGNKLD 170
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 27 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 79
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 80 -----ILQNLCGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 126
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 127 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 175
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 26 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 78
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 79 -----ILQNLXGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 125
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 126 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 174
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 25 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 77
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 78 -----ILQNLCGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 124
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 209 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 144
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS--VHAHLGR 324
LL E ++ + + D G + ++S + GT Y + V +G
Sbjct: 145 VLLSSQE--EDCLIKITDFGHSKILGETSLMR---------TLCGTPTYLAPEVLVSVGT 193
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
G +R D SL L L G P+ ++ +
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
GD +VM+ L G SL DV M +A + E + LE +HS +H ++K +N
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDN 147
Query: 267 FLLG 270
LLG
Sbjct: 148 ILLG 151
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 25 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 77
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 78 -----ILQNLXGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 124
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 87/225 (38%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA+K ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHI-------LTGK---EVAVKIIDKTQLNSSSLQKLFREVR 65
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y++ G ++D + E A + +S
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVS 124
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL + + + D G + + + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDA-----DXNIKIADFGFSNEF---------TFGNKLD 170
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 25 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 77
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 78 -----ILQNLXGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 124
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N L+ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVLID----HEHRKLRLIDWGLA 179
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 103/266 (38%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y S G KG G Y + P L ++M A
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL------PQL------------VDMAA 287
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 288 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 333
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 334 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 392 DQVERGYRMPCPPECPESLHDLMCQC 417
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 209 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 144
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS--VHAHLGR 324
LL E ++ + + D G + ++S + GT Y + V +G
Sbjct: 145 VLLSSQE--EDCLIKITDFGHSKILGETSLMR---------TLCGTPTYLAPEVLVSVGT 193
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
G +R D SL L L G P+ ++ +
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 208 GDYYVMVMDML-GPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPE 265
GD +VM+ L G +L D+ +HT M+ E +A + + + L +H++G +H D+K +
Sbjct: 114 GDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 266 NFLL 269
+ LL
Sbjct: 171 SILL 174
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 209 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 94 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 150
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS--VHAHLGR 324
LL E ++ + + D G + ++S + GT Y + V +G
Sbjct: 151 VLLSSQE--EDCLIKITDFGHSKILGETSLMR---------TLCGTPTYLAPEVLVSVGT 199
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
G +R D SL L L G P+ ++ +
Sbjct: 200 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 231
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 103/266 (38%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y S G KG G Y + P L ++M A
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL------PQL------------VDMAA 287
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 288 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 333
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 334 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 392 DQVERGYRMPCPPECPESLHDLMCQC 417
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 104/261 (39%), Gaps = 44/261 (16%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
R++ KLG+G FG+V++G G T +T PG + + E QV
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ-------------EAQVM 316
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-----MSIEMVACIAIE 244
L V +++ + Y++ M SL D + ++M A IA
Sbjct: 317 KKLRHEKLV-QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA-S 374
Query: 245 AISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQ 304
++ +E+M+ YVH D++ N L+G + + D GLA D+ EY
Sbjct: 375 GMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN------EYTA 420
Query: 305 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY-------QGEN 356
R + +++ + A L + + D+ S L L +GR+P+ G Q E
Sbjct: 421 RQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
Query: 357 KGFLVCKKKMATSPETLCCFC 377
+ C + S L C C
Sbjct: 480 GYRMPCPPECPESLHDLMCQC 500
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 209 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 87 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 143
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS--VHAHLGR 324
LL E ++ + + D G + ++S + GT Y + V +G
Sbjct: 144 VLLSSQE--EDCLIKITDFGHSKILGETSLMR---------TLCGTPTYLAPEVLVSVGT 192
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
G +R D SL L L G P+ ++ +
Sbjct: 193 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 224
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 209 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 144
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS--VHAHLGR 324
LL E ++ + + D G + ++S + GT Y + V +G
Sbjct: 145 VLLSSQE--EDCLIKITDFGHSKILGETSLMR---------TLCGTPTYLAPEVLVSVGT 193
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
G +R D SL L L G P+ ++ +
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 17 FDIGRPLGKGKFGNVYLAR--------EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
+ L + + ++ + Y+M+ L+ + + A E
Sbjct: 69 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADA 127
Query: 249 LEKMHSRGYVHGDVKPENFLLG 270
L H R +H D+KPEN L+G
Sbjct: 128 LHYCHERKVIHRDIKPENLLMG 149
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 16 FDIGRPLGKGKFGNVYLAR--------EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
+ L + + ++ + Y+M+ L+ + + A E
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADA 126
Query: 249 LEKMHSRGYVHGDVKPENFLLG 270
L H R +H D+KPEN L+G
Sbjct: 127 LHYCHERKVIHRDIKPENLLMG 148
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 209 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 269
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS--VHAHLGR 324
LL E ++ + + D G + ++S + GT Y + V +G
Sbjct: 270 VLLSSQE--EDCLIKITDFGHSKILGETSLMR---------TLCGTPTYLAPEVLVSVGT 318
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
G +R D SL L L G P+ ++ +
Sbjct: 319 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 93/241 (38%), Gaps = 29/241 (12%)
Query: 116 APLPEKVQVGGSPV----YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFE 171
APL E V P Y R LGKGGF + Y I +T E V ++ +
Sbjct: 10 APLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITDMDTKEVFAGKVVPKSMLLK 66
Query: 172 -HRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNS 230
H+ K E ++ +L H V F YV++ SL ++
Sbjct: 67 PHQKEKMST-----EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRK 121
Query: 231 HTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
E + + I ++ +H+ +H D+K N L D+ + + D GLAT+
Sbjct: 122 AVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN-----DDMDVKIGDFGLATK 175
Query: 291 WRDSSTGQHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
+E+D +R GT Y + + S D+ SL L LL G+ P+
Sbjct: 176 ---------IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
Query: 350 Q 350
+
Sbjct: 227 E 227
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 25 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 77
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 78 -----ILQNLXGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 124
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 125 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID----HELRKLRLIDWGLA 173
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 209 DYYVMVMDMLGPSLWD--VWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPEN 266
DYY+++ M G L+D V N + ++ + A+ L H G +H D+KPEN
Sbjct: 227 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPEN 283
Query: 267 FLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS--VHAHLGR 324
LL E ++ + + D G + ++S + GT Y + V +G
Sbjct: 284 VLLSSQE--EDCLIKITDFGHSKILGETSLMR---------TLCGTPTYLAPEVLVSVGT 332
Query: 325 TG-SRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
G +R D SL L L G P+ ++ +
Sbjct: 333 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 364
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 103/266 (38%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 72
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y S G KG G Y + P L ++M A
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL------PQL------------VDMAA 114
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 115 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 160
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 161 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 218
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 219 DQVERGYRMPCPPECPESLHDLMCQC 244
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 86/225 (38%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA+K ++ + E +
Sbjct: 9 YRLLKTIGKGNFAKVKLARHI-------LTGK---EVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVS 117
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL D + + D + + D
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLL--------------DADMNIKIADFGFSNEFTFGNKLD 163
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 135 KLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGG 194
K+G+G +G VY R N+ TG ++ + ++G E + L
Sbjct: 10 KIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAIREISLLKELNH 61
Query: 195 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMH 253
+ V + + Y +V + L L D + ++ T + + ++ + + L H
Sbjct: 62 PNIVKLLDVIHTENKLY-LVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 254 SRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
S +H D+KPEN L+ E + L D GLA
Sbjct: 121 SHRVLHRDLKPENLLIN-----TEGAIKLADFGLA 150
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 31/242 (12%)
Query: 116 APLPEKVQVGGSPV----YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFE 171
APL E V P Y R LGKGGF + Y I +T E V ++ +
Sbjct: 26 APLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCY---EITDMDTKEVFAGKVVPKSMLLK 82
Query: 172 -HRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNN 229
H+ K E ++ +L H V H D+ +V+++ SL ++
Sbjct: 83 PHQKEKMST-----EIAIHKSLDNPHVV-GFHGFFEDDDFVYVVLEICRRRSLLELHKRR 136
Query: 230 SHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLAT 289
E + + I ++ +H+ +H D+K N L D+ + + D GLAT
Sbjct: 137 KAVTEPEARYFMR-QTIQGVQYLHNNRVIHRDLKLGNLFLN-----DDMDVKIGDFGLAT 190
Query: 290 RWRDSSTGQHVEYD-QRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLP 348
+ +E+D +R GT Y + + S D+ SL L LL G+ P
Sbjct: 191 K---------IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
Query: 349 WQ 350
++
Sbjct: 242 FE 243
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 205 GRQGDYYVMVMDMLGPSLWD-VWNNNSHTMSIEMVACIAIEAISILEKMHSRG-YVHGDV 262
G G + MV ++LG L + +N + + V I + + L+ +H++ +H D+
Sbjct: 98 GVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDI 157
Query: 263 KPENFLLGPPE 273
KPEN LL E
Sbjct: 158 KPENILLSVNE 168
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 203 FKGRQGDYYVMVMDMLGPSLWD-VWNNNSHTMSIEMVACIAIEAISILEKMHSRG-YVHG 260
G G + MV ++LG L + +N + + V I + + L+ +H++ +H
Sbjct: 112 ISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHT 171
Query: 261 DVKPENFLLGPPE 273
D+KPEN LL E
Sbjct: 172 DIKPENILLSVNE 184
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ +S E V + + + L+ +HS G +H D+KP N +
Sbjct: 102 LVTTLMGADLNNIVK--CQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN-- 157
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA + + TG
Sbjct: 158 ---EDCELRILDFGLARQADEEMTG 179
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 206 RQGDYYVM--VMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSR-GYVHGDV 262
R+GD ++ + D + + T+ +++ IA+ + LE +HS+ +H DV
Sbjct: 104 REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV 163
Query: 263 KPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS---VH 319
KP N L+ ++ D G++ D D D+ G Y + ++
Sbjct: 164 KPSNVLINA-----LGQVKXCDFGISGYLVD---------DVAKDIDAGCKPYXAPERIN 209
Query: 320 AHLGRTG-SRRDDLESLAYTLIFLLRGRLPWQGY 352
L + G S + D+ SL T I L R P+ +
Sbjct: 210 PELNQKGYSVKSDIWSLGITXIELAILRFPYDSW 243
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 10/142 (7%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ + + + F+ + K G + E ++
Sbjct: 16 FDIVRPLGKGKFGNVYLAR--------EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 189 YNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
+ L + + ++ + Y+M+ L+ + + A E
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADA 126
Query: 249 LEKMHSRGYVHGDVKPENFLLG 270
L H R +H D+KPEN L+G
Sbjct: 127 LHYCHERKVIHRDIKPENLLMG 148
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 122 VQVGGSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYG 181
VQ G Y + RK+G+G + +V+ G + N NE+ ++ K + +
Sbjct: 46 VQWGEQDDYEVVRKVGRGKYSEVFEGINV---NNNEKCIIKILKPVKKKKIKREIK---- 98
Query: 182 PPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSH------TMSI 235
+ N GG + V + Q PSL + NN+ T++
Sbjct: 99 -----ILQNLXGGPNIVKLLDIVRDQHSK--------TPSLIFEYVNNTDFKVLYPTLTD 145
Query: 236 EMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ E + L+ HS+G +H DVKP N ++ + +KL L+D GLA
Sbjct: 146 YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLA 194
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL--- 269
+V+D++ L + ++ S +++E V + + L+ MHS +H D+KP N L+
Sbjct: 136 VVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 194
Query: 270 ------------GPPETPDEKKLFLVDLGLATRW 291
G +P E + F+ + +ATRW
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEY-VATRW 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 84/223 (37%), Gaps = 41/223 (18%)
Query: 136 LGKGGFGQVYVGRR--------IGPTNTNERTGPGAVEVALKFEHRSS---KGCNYGPPY 184
+G GGFGQV+ + I N V+ K +H + GC G Y
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDY 78
Query: 185 EWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIE 244
+ + ++ S + F + M+ + W ++ V +A+E
Sbjct: 79 DPET-SSKNSSRSKTKCLF---------IQMEFCDKGTLEQWIEKRRGEKLDKV--LALE 126
Query: 245 AISILEK----MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHV 300
+ K +HS+ ++ D+KP N L D K++ + D GL T ++
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFL-----VDTKQVKIGDFGLVTSLKN------- 174
Query: 301 EYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLL 343
D + +GT+RY S + + DL +L L LL
Sbjct: 175 --DGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 182 PPYEWQVYNALGGSHGVPRVHFKG-----RQGDYYVMVMDMLGPSLWDVWNN---NSHTM 233
PP +N LGG + H K Q Y ++M+ + +L V + + ++
Sbjct: 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSI 138
Query: 234 SIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD 293
+ +++ + + +HS G H D+KP+N L+ + L L D G A +
Sbjct: 139 PMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN----SKDNTLKLCDFGSAKKLIP 194
Query: 294 S 294
S
Sbjct: 195 S 195
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Query: 129 VYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNY-GPPYEWQ 187
VY + +GKG F V RR T ++ V+VA KF SS G + E
Sbjct: 25 VYELCEVIGKGAFSVV---RRCINRETGQQFAVKIVDVA-KF--TSSPGLSTEDLKREAS 78
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLW--DVWNNNSHTMSIEMVACIAIEA 245
+ + L H V + G Y++ M G L V ++ + E VA +
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 246 I-SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDS 294
I L H +H DVKPEN LL E KL D G+A + +S
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLG--DFGVAIQLGES 186
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVE 301
A E S L +HS V+ D+KPEN LL + + L D GL +++E
Sbjct: 145 AAEIASALGYLHSLNIVYRDLKPENILLD-----SQGHIVLTDFGLCK--------ENIE 191
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPW 349
++ F GT Y + + R D L L +L G P+
Sbjct: 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA++ ++ + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHI-------LTGK---EVAVRIIDKTQLNSSSLQKLFREVR 65
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 124
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL D + + D + + D
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLL--------------DADMNIKIADFGFSNEFTFGNKLD 170
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
Query: 243 IEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEY 302
+EA++ L H G VH D+KPEN L P PD L + D GL+ + VE+
Sbjct: 158 LEAVAYL---HENGIVHRDLKPENLLYATP-APD-APLKIADFGLS---------KIVEH 203
Query: 303 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGF 359
GT Y + G D+ S+ LL G P+ +G+ F
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 178
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 178
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 177
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 106/303 (34%), Gaps = 48/303 (15%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+ I R +GKG FG+V + ++ N ++ K R+ + E Q+
Sbjct: 17 FEILRAIGKGSFGKVCIVQK----NDTKKMYAMKYMNKQKCVERNEVRNVFK---ELQIM 69
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
L V + + D +++V +LG L N H E V E + L
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMAL 128
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVF 309
+ + ++ +H D+KP+N LL + + + D +A + + +
Sbjct: 129 DYLQNQRIIHRDMKPDNILLD-----EHGHVHITDFNIAAM---------LPRETQITTM 174
Query: 310 RGTVRYASVHAHLGRTG---SRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKM 366
GT Y + R G S D SL T LLRGR P+ K++
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS------TSSKEI 228
Query: 367 ATSPETLCCFCPQPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQK 426
+ ET P + + +SL ++ PNPD R Q
Sbjct: 229 VHTFETTVVTYPSAWS-----------------QEMVSLLKKLLEPNPDQRFSQLSDVQN 271
Query: 427 LIY 429
Y
Sbjct: 272 FPY 274
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL--- 269
+V+D++ L + ++ S +++E V + + L+ MHS +H D+KP N L+
Sbjct: 137 VVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 195
Query: 270 ------------GPPETPDEKKLFLVDLGLATRW 291
G +P E + F+ + +ATRW
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEY-VATRW 228
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 179
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
E + L+ HS G +H DVKP N ++ + +KL L+D GLA
Sbjct: 144 EILKALDYCHSMGIMHRDVKPHNVMID----HEHRKLRLIDWGLA 184
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 37/239 (15%)
Query: 126 GSPVYRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPG--AVEVALKFEH---RSSKGCNY 180
G +++ RKLG G +G+V + + E+ G A++V K + R S
Sbjct: 35 GESYFKV-RKLGSGAYGEVLLCK--------EKNGHSEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 181 GPPYEWQVYN--ALGGSHGVPRVH-----FKGRQGDYYVMVMDML-GPSLWDVWNNNSHT 232
+ ++YN +L S P + F+ ++ Y+ +V + G L++ N H
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK--YFYLVTEFYEGGELFEQIIN-RHK 142
Query: 233 MSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWR 292
A I + +S + +H VH D+KPEN LL + K +VD GL++ +
Sbjct: 143 FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK--IVDFGLSSFFS 200
Query: 293 DSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQG 351
+Y R + GT Y + L + + + D+ S + LL G P+ G
Sbjct: 201 K-------DYKLRDRL--GTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 135 KLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGG 194
K+G+G +G VY R N+ TG ++ + ++G E + L
Sbjct: 13 KIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAIREISLLKELNH 64
Query: 195 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMH 253
+ V + + Y +V + L L D + ++ T + + ++ + + L H
Sbjct: 65 PNIVKLLDVIHTENKLY-LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 254 SRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
S +H D+KP+N L+ E + L D GLA
Sbjct: 124 SHRVLHRDLKPQNLLIN-----TEGAIKLADFGLA 153
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 28/175 (16%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKF-EHRSSKGCNYGPPYEW-- 186
Y I +LG G F V R + TG +E A KF + R S+ G E
Sbjct: 14 YDIGEELGSGQFAIVKKCR-------EKSTG---LEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 187 -------QVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMV 238
QV + H V +H V++++++ G L+D + ++S E
Sbjct: 64 REVSILRQVLH-----HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEA 117
Query: 239 ACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD 293
+ + + +H++ H D+KPEN +L P + L+D GLA D
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 243 IEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
++ S LE MHSR +H D+KP N + + L DLGL + +T H
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGV-----VKLGDLGLGRFFSSKTTAAH 194
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 28/175 (16%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKF-EHRSSKGCNYGPPYEW-- 186
Y I +LG G F V R + TG +E A KF + R S+ G E
Sbjct: 14 YDIGEELGSGQFAIVKKCR-------EKSTG---LEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 187 -------QVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMV 238
QV + H V +H V++++++ G L+D + ++S E
Sbjct: 64 REVSILRQVLH-----HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEA 117
Query: 239 ACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD 293
+ + + +H++ H D+KPEN +L P + L+D GLA D
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 135 KLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGG 194
K+G+G +G VY R N+ TG ++ + ++G E + L
Sbjct: 12 KIGEGTYGVVYKAR-------NKLTGEVVALKKIRLD-TETEGVPSTAIREISLLKELNH 63
Query: 195 SHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMH 253
+ V + + Y +V + L L D + ++ T + + ++ + + L H
Sbjct: 64 PNIVKLLDVIHTENKLY-LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 254 SRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
S +H D+KP+N L+ E + L D GLA
Sbjct: 123 SHRVLHRDLKPQNLLIN-----TEGAIKLADFGLA 152
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 196 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 254
H V +H V++++++ G L+D + ++S E + + + +H+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 255 RGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD 293
+ H D+KPEN +L P + L+D GLA D
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 28/175 (16%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKF-EHRSSKGCNYGPPYEW-- 186
Y I +LG G F V R + TG +E A KF + R S+ G E
Sbjct: 14 YDIGEELGSGQFAIVKKCR-------EKSTG---LEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 187 -------QVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMV 238
QV + H V +H V++++++ G L+D + ++S E
Sbjct: 64 REVSILRQVLH-----HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEA 117
Query: 239 ACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD 293
+ + + +H++ H D+KPEN +L P + L+D GLA D
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y++ +LGKG F V RR T + + K R + E ++
Sbjct: 6 YQLFEELGKGAFSVV---RRCMKIPTGQEYAAKIINTK-KLSARDHQKLER----EARIC 57
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
L + V R+H + ++ +V D++ G L++ + + CI + +
Sbjct: 58 RLLKHPNIV-RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILES 115
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ H G VH D+KPEN LL K L D GLA
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVK--LADFGLA 153
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Query: 197 GVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRG 256
+ R+H +V + L +++ + + E+V + + L HSR
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 257 YVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW----RDSSTGQHVEYDQRPDVFRGT 312
+H D+KP+N L+ +L L D GLA + R S + + PDV G
Sbjct: 122 VLHRDLKPQNLLIN-----RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 313 VRYAS 317
Y++
Sbjct: 177 KLYST 181
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 219 GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEK 278
G SL+ + + + IA + ++ +H++ +H D+K N L T
Sbjct: 115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT---- 170
Query: 279 KLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYAS---VHAHLGRTGSRRDDLESL 335
+ + D GLAT S Q VE +P G+V + + + S + D+ S
Sbjct: 171 -VKIGDFGLATVKSRWSGSQQVE---QPT---GSVLWMAPEVIRMQDNNPFSFQSDVYSY 223
Query: 336 AYTLIFLLRGRLPWQGYQGENK-GFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLKFD 394
L L+ G LP+ ++ F+V + + L CP+ + V V +
Sbjct: 224 GIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKE 283
Query: 395 EEPNYAKYISLFDGIVGPNPDI 416
E P + + +S + + P I
Sbjct: 284 ERPLFPQILSSIELLQHSLPKI 305
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 196 HGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHS 254
H V +H V++++++ G L+D + ++S E + + + +H+
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 255 RGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD 293
+ H D+KPEN +L P + L+D GLA D
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPI-PHIKLIDFGLAHEIED 171
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y++ +LGKG F V RR T + + K R + E ++
Sbjct: 6 YQLFEELGKGAFSVV---RRCMKIPTGQEYAAKIINTK-KLSARDHQKLER----EARIC 57
Query: 190 NALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISI 248
L + V R+H + ++ +V D++ G L++ + + CI + +
Sbjct: 58 RLLKHPNIV-RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILES 115
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ H G VH D+KPEN LL K L D GLA
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVK--LADFGLA 153
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y + S G KG G Y + P L ++M A
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL------PQL------------VDMAA 121
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GLA D+
Sbjct: 122 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDN----- 167
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
E R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 168 -EXTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQC 251
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R + TG EVA+K ++ E +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHV-------LTGR---EVAVKIIDKTQLNPTSLQKLFREVR 66
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E A + +S
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVS 125
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL + + + D G + + + G + D
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLD-----GDMNIKIADFGFSNEF---TVGNKL------D 171
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVE 301
A E LE +H V+ D+KPEN LL D + + DLGLA HV
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLD-----DHGHIRISDLGLAV---------HVP 337
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 350
Q GTV Y + + D +L L ++ G+ P+Q
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 19/162 (11%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
Y + +KLGKG +G V+ + + RTG V V F+ + E +
Sbjct: 11 YELVKKLGKGAYGIVW-------KSIDRRTGE-VVAVKKIFDAFQNSTDAQRTFREIMIL 62
Query: 190 NALGGSHGVPRVHFKGRQG---DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L G + + R D Y +V D + L V N + + + I
Sbjct: 63 TELSGHENIVNLLNVLRADNDRDVY-LVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLI 119
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+++ +HS G +H D+KP N LL E + + D GL+
Sbjct: 120 KVIKYLHSGGLLHRDMKPSNILLNA-----ECHVKVADFGLS 156
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVE 301
A E LE +H V+ D+KPEN LL D + + DLGLA HV
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLD-----DHGHIRISDLGLAV---------HVP 337
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQ 350
Q GTV Y + + D +L L ++ G+ P+Q
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 259 HGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRD---SSTGQHVEYDQRPDVFRGTVRY 315
H DVKPEN L+ + +LVD G+A+ D + G V GT+ Y
Sbjct: 157 HRDVKPENILVSA-----DDFAYLVDFGIASATTDEKLTQLGNTV----------GTLYY 201
Query: 316 ASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQ 353
+ + R D+ +L L L G P+QG Q
Sbjct: 202 XAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSK-GCNYGPPYEWQV 188
+ I R LGKG FG VY+ R E+ V + + F+ + K G + E ++
Sbjct: 25 FEIGRPLGKGKFGNVYLAR--------EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 189 YNALGGSHGVPRVH--FKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L + R++ F R+ Y ++ G ++ S T + A I E
Sbjct: 77 QAHLHHP-NILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELA 133
Query: 247 SILEKMHSRGYVHGDVKPEN 266
L H + +H D+KPEN
Sbjct: 134 DALMYCHGKKVIHRDIKPEN 153
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Query: 205 GRQGDYYVMVMD--MLGPSLWDVWNNNSHTMS-----------IEMVACIAIEAISILEK 251
R+ Y +V D + P ++DV +N M IE IA + I+ K
Sbjct: 387 AREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGK 446
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGL 287
+H +H D+ NF+ +K L+++D GL
Sbjct: 447 LHKNDVIHNDLTTSNFIF-------DKDLYIIDFGL 475
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 20/96 (20%)
Query: 205 GRQGDYYVMVMD--MLGPSLWDVWNNNSHTMS-----------IEMVACIAIEAISILEK 251
R+ Y +V D + P ++DV +N M IE IA + I+ K
Sbjct: 382 AREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGK 441
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGL 287
+H +H D+ NF+ +K L+++D GL
Sbjct: 442 LHKNDVIHNDLTTSNFIF-------DKDLYIIDFGL 470
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 212 VMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLG 270
V++++++ G L+D + ++S E + + + +H++ H D+KPEN +L
Sbjct: 91 VLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 271 PPETPDEKKLFLVDLGLATRWRD 293
P + L+D GLA D
Sbjct: 150 DKNIPI-PHIKLIDFGLAHEIED 171
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 243 IEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEK-KLFLVDLGLATRWRDSSTGQHVE 301
++A+ L++ H G +H DVKP N LL DE+ ++ L D G++ R D
Sbjct: 134 VKALYYLKEKH--GVIHRDVKPSNILL------DERGQIKLCDFGISGRLVD-------- 177
Query: 302 YDQRPDVFRGTVRYASVHAHLGRTGSRRD-----DLESLAYTLIFLLRGRLPWQGYQGEN 356
D+ D G Y + ++ D D+ SL +L+ L G+ P++ + +
Sbjct: 178 -DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD- 235
Query: 357 KGFLVCKKKMATSPETLCCFC--PQPFRLFVEYVVNLKFDEEPNYAKYI 403
F V K + P L F+ FV+ + + P Y K +
Sbjct: 236 --FEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLL 269
+ I LE +HS+G VH D+KP N LL
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLL 142
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 197 GVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSR 255
+ R+H + ++ +V D++ G L++ + + CI + + + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAVLHCHQM 122
Query: 256 GYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
G VH D+KPEN LL K L D GLA
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVK--LADFGLA 153
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 233 MSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+S+ ++ + I+ + HSR +H D+KP+N LL + + L + D GLA
Sbjct: 129 VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 102/266 (38%), Gaps = 54/266 (20%)
Query: 131 RIDRKLGKGGFGQVYVGRRIGPTNTNERT-GPGAV---------EVALKFEHRSSKGCNY 180
R++ KLG+G FG+V++G G T +T PG + +V K H Y
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL-Y 246
Query: 181 GPPYEWQVYNALG-GSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVA 239
E +Y S G KG G Y + P L ++M A
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL------PQL------------VDMAA 288
Query: 240 CIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQH 299
IA ++ +E+M+ YVH D++ N L+G + + D GL D+
Sbjct: 289 QIA-SGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLGRLIEDN----- 334
Query: 300 VEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFL-LRGRLPWQGY------ 352
EY R + +++ + A L + + D+ S L L +GR+P+ G
Sbjct: 335 -EYTARQGA-KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 392
Query: 353 -QGENKGFLVCKKKMATSPETLCCFC 377
Q E + C + S L C C
Sbjct: 393 DQVERGYRMPCPPECPESLHDLMCQC 418
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 21/158 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
I +GKG FGQVY GR G EVA++ + ++ +V
Sbjct: 37 IGELIGKGRFGQVYHGRWHG-------------EVAIRLIDIERDNEDQLKAFKREVMAY 83
Query: 192 LGGSHGVPRVHFKGRQGDYYVMVMDML--GPSLWDVWNNNSHTMSIEMVACIAIEAISIL 249
H + ++ ++ L G +L+ V + + + IA E + +
Sbjct: 84 RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143
Query: 250 EKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGL 287
+H++G +H D+K +N D K+ + D GL
Sbjct: 144 GYLHAKGILHKDLKSKNVFY------DNGKVVITDFGL 175
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)
Query: 232 TMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW 291
+MS E I I A L +H+R +H DVK N LL P + D G+
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK-----ITDFGI---- 185
Query: 292 RDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGR 346
S G ++ V +GT+ Y + + + D+ S L +L R
Sbjct: 186 --SKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWR 292
+E +HS+G VH D+KP N L E+ + + L + D G A + R
Sbjct: 134 VEYLHSQGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLR 176
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS+ H D+KPEN +L P+ ++ L+D G+A +
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPN-PRIKLIDFGIAHK 161
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 84/224 (37%), Gaps = 30/224 (13%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRS---SKGCNYGPPYEW 186
Y I LG+G FG+V + T+ +T +VALKF R + E
Sbjct: 11 YIIRETLGEGSFGKVKLA-------THYKTQQ---KVALKFISRQLLKKSDMHMRVEREI 60
Query: 187 QVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H + D VMV++ G L+D + M+ + + I
Sbjct: 61 SYLKLLRHPHIIKLYDVITTPTDI-VMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQQII 118
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRP 306
+E H VH D+KPEN LL D + + D GL+ D + +
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLD-----DNLNVKIADFGLSNIMTDGNFLK-------- 165
Query: 307 DVFRGTVRYASVHAHLGRT-GSRRDDLESLAYTLIFLLRGRLPW 349
G+ YA+ G+ D+ S L +L GRLP+
Sbjct: 166 -TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS+ H D+KPEN +L P+ ++ L+D G+A +
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPN-PRIKLIDFGIAHK 168
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS+ H D+KPEN +L P+ ++ L+D G+A +
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPN-PRIKLIDFGIAHK 182
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWR 292
+E +HS+G VH D+KP N L E+ + + L + D G A + R
Sbjct: 134 VEYLHSQGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLR 176
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 24/194 (12%)
Query: 106 GAGAEDEGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVG----------RRIGPTNT 155
G A+ E ++ L ++ SP Y + R + G +G V G +R+ T +
Sbjct: 1 GMQAKGEAAMRDLIAELHAMQSP-YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVS 59
Query: 156 NERTGPGAVEVAL-KFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMV 214
+ RT + L K R + N+ + N LG VHF+ +V
Sbjct: 60 DGRTVNILSDSFLCKRVLREIRLLNH-----FHHPNILGLRDIF--VHFEEPAMHKLYLV 112
Query: 215 MDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPET 274
+++ L V ++ +S + + + L +H G VH D+ P N LL
Sbjct: 113 TELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---- 168
Query: 275 PDEKKLFLVDLGLA 288
D + + D LA
Sbjct: 169 -DNNDITICDFNLA 181
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 39/192 (20%)
Query: 93 MDEYDSGGRSADKGAGAEDEGSIAPL-----PEKVQVGGSPVYRIDRKLGKGGFGQVYVG 147
MD +GGR AG+ + +A L PEK+ + R++G G FG VY
Sbjct: 26 MDPMPAGGR-----AGSLKDPDVAELFFKDDPEKL-------FSDLREIGHGSFGAVYFA 73
Query: 148 RRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQ----VYNALGGSHGVPRVHF 203
R + + VA+K S K N +WQ L + +
Sbjct: 74 RDVRNSEV----------VAIKKMSYSGKQSN----EKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 204 KG---RQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHG 260
+G R+ ++++ LG S D+ + + +A + A+ L +HS +H
Sbjct: 120 RGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 261 DVKPENFLLGPP 272
DVK N LL P
Sbjct: 179 DVKAGNILLSEP 190
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+H G VH D+KPEN L + +E K+ + D GL+
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQD--EESKIMISDFGLS 170
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 210 YYVMVMDMLGPSLWDVWNNNSHT-MSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
+ + ++LG S +D +N++ I V +A + ++ +H H D+KPEN L
Sbjct: 110 HMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENIL 169
Query: 269 L 269
Sbjct: 170 F 170
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ R +G+G FG V+ G + P N A+ VA+K + K C E + A
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 65
Query: 192 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H V + + +M + LG L +++ + + A +
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+ L + S+ +VH D+ N L+ + + L D GL+ DS+
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSRYMEDST 168
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 104 LVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 160
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDL 332
T L ++D GLA R +ST + P V T Y + LG D+
Sbjct: 161 CT-----LKILDFGLA---RTASTN----FMMTPYVV--TRYYRAPEVILGMGYKENVDI 206
Query: 333 ESLAYTLIFLLRGRLPWQG 351
S+ + L++G + +QG
Sbjct: 207 WSVGCIMGELVKGSVIFQG 225
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ R +G+G FG V+ G + P N A+ VA+K + K C E + A
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 64
Query: 192 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H V + + +M + LG L +++ + + A +
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+ L + S+ +VH D+ N L+ + + L D GL+ DS+
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSRYMEDST 167
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ R +G+G FG V+ G + P N A+ VA+K + K C E + A
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 59
Query: 192 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H V + + +M + LG L +++ + + A +
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 118
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+ L + S+ +VH D+ N L+ + + L D GL+ DS+
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSRYMEDST 162
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 210 YYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLL 269
++ +V D++ + T+S + I + ++ +H VH D+KPEN LL
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Query: 270 GPPETPDEKKLFLVDLGLATR 290
D+ + L D G + +
Sbjct: 158 D-----DDMNIKLTDFGFSCQ 173
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 185 EWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIE 244
E + + G + ++ ++ +V D++ + T+S + I
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 245 AISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+ ++ +H VH D+KPEN LL D+ + L D G + +
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLD-----DDMNIKLTDFGFSCQ 160
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 185 EWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIE 244
E + + G + ++ ++ +V D++ + T+S + I
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 245 AISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+ ++ +H VH D+KPEN LL D+ + L D G + +
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLD-----DDMNIKLTDFGFSCQ 173
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ R +G+G FG V+ G + P N A+ VA+K + K C E + A
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 62
Query: 192 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H V + + +M + LG L +++ + + A +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+ L + S+ +VH D+ N L+ + + L D GL+ DS+
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSRYMEDST 165
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 35/172 (20%)
Query: 129 VYRIDRKLGKGGF-----------GQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKG 177
+Y++ +LGKG F GQ Y + I + R K E R ++
Sbjct: 23 MYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ-------KLE-REARI 74
Query: 178 CNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIE 236
C L + R+H + ++ ++ D++ G L++ + +
Sbjct: 75 CR------------LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD 122
Query: 237 MVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
CI + + + H G VH D+KPEN LL K L D GLA
Sbjct: 123 ASHCIQ-QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVK--LADFGLA 171
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ R +G+G FG V+ G + P N A+ VA+K + K C E + A
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 90
Query: 192 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H V + + +M + LG L +++ + + A +
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+ L + S+ +VH D+ N L+ + + L D GL+ DS+
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSRYMEDST 193
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Query: 197 GVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRG 256
+ R+H +V + L +++ + + E+V + + L HSR
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 257 YVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW----RDSSTGQHVEYDQRPDVFRGT 312
+H D+KP+N L+ +L L + GLA + R S + + PDV G
Sbjct: 122 VLHRDLKPQNLLIN-----RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 313 VRYAS 317
Y++
Sbjct: 177 KLYST 181
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ R +G+G FG V+ G + P N A+ VA+K + K C E + A
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENP-------AMAVAIK----TCKNCTSDSVREKFLQEA 62
Query: 192 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H V + + +M + LG L +++ + + A +
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+ L + S+ +VH D+ N L+ + + L D GL+ DS+
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSRYMEDST 165
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 132 IDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNA 191
+ R +G+G FG V+ G + P N A+ VA+K + K C E + A
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENP-------ALAVAIK----TCKNCTSDSVREKFLQEA 67
Query: 192 L-----GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAI 246
L H V + + +M + LG L +++ + + A +
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSS 295
+ L + S+ +VH D+ N L+ + + L D GL+ DS+
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDC-----VKLGDFGLSRYMEDST 170
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWR 292
+E +H++G VH D+KP N L E+ + + + + D G A + R
Sbjct: 129 VEYLHAQGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLR 171
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 243 IEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+EA+S L H+ VH D+KPEN LL D ++ L D G +
Sbjct: 210 LEAVSFL---HANNIVHRDLKPENILLD-----DNMQIRLSDFGFS 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWR 292
+E +H++G VH D+KP N L E+ + + + + D G A + R
Sbjct: 129 VEYLHAQGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLR 171
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA+K ++ E +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHI-------LTGR---EVAIKIIDKTQLNPTSLQKLFREVR 63
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E + + +S
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVS 122
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL + + + D G + + + G + D
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---TVGGKL------D 168
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G+ YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 25/166 (15%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNE------RTGPGAVEVALKFEHRSSKGCNYGPP 183
Y++ +LGKG F V R + T T E T + K E R ++ C
Sbjct: 33 YQLFEELGKGAFS--VVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE-REARICR---- 85
Query: 184 YEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEMVACIA 242
L + R+H + ++ +V D++ G L++ + + CI
Sbjct: 86 --------LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH 137
Query: 243 IEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ + + +H VH D+KPEN LL K L D GLA
Sbjct: 138 -QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVK--LADFGLA 180
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ S ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--SQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GL D TG
Sbjct: 157 AVN-----EDSELKILDFGLCRHTDDEMTG 181
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 106 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 161
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 162 ---EDSELKILDFGLARHTDDEMTG 183
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 115 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 170
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 171 ---EDXELKILDFGLARHTDDEMTG 192
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 110 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 165
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 166 ---EDSELKILDFGLARHTDDEMTG 187
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 109 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 164
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 165 ---EDXELKILDFGLARHTDDEMTG 186
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 109 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 164
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 165 ---EDXELKILDFGLARHTDDEMTG 186
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 84/218 (38%), Gaps = 16/218 (7%)
Query: 136 LGKGGFGQVYVGR-RIGPTN-TNERTGPGAVEVALKFEHRSSKG-CNYGPPYEWQVYNAL 192
LG+GGFG V+ + ++ N +R E+A + R K P + +NA
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 193 GGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAI--EAISILE 250
+ ++ + Y+ + +L D N E C+ I + +E
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 251 KMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
+HS+G +H D+KP N T D+ + + D GL T D + P R
Sbjct: 133 FLHSKGLMHRDLKPSNIFF----TMDD-VVKVGDFGLVTAM-DQDEEEQTVLTPMPAYAR 186
Query: 311 -----GTVRYASVHAHLGRTGSRRDDLESLAYTLIFLL 343
GT Y S G + S + D+ SL L LL
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 28/225 (12%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPY--EWQ 187
YR+ + +GKG F +V + R I TG EVA+K ++ E +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHI-------LTGR---EVAIKIIDKTQLNPTSLQKLFREVR 66
Query: 188 VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAIS 247
+ L + V + Y+++ G ++D + E + + +S
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVS 125
Query: 248 ILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPD 307
++ H + VH D+K EN LL + + + D G + + + G + D
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDA-----DMNIKIADFGFSNEF---TVGGKL------D 171
Query: 308 VFRGTVRYASVHAHLGRTGSRRD-DLESLAYTLIFLLRGRLPWQG 351
F G YA+ G+ + D+ SL L L+ G LP+ G
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--XQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDXELKILDFGLARHTDDEMTG 181
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 11/115 (9%)
Query: 232 TMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW 291
+MS E I I A L +H+R +H DVK N LL P + D G+
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK-----ITDFGI---- 185
Query: 292 RDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGR 346
S G + V +GT+ Y + + + D+ S L +L R
Sbjct: 186 --SKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 133 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 188
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 189 ---EDCELKILDFGLARHTDDEMTG 210
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 24/191 (12%)
Query: 109 AEDEGSIAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVG----------RRIGPTNTNER 158
A+ E ++ L ++ SP Y + R + G +G V G +R+ T ++ R
Sbjct: 4 AKGEAAMRDLIAELHAMQSP-YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGR 62
Query: 159 TGPGAVEVAL-KFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHFKGRQGDYYVMVMDM 217
T + L K R + N+ + N LG VHF+ +V ++
Sbjct: 63 TVNILSDSFLCKRVLREIRLLNH-----FHHPNILGLRDIF--VHFEEPAMHKLYLVTEL 115
Query: 218 LGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDE 277
+ L V ++ +S + + + L +H G VH D+ P N LL D
Sbjct: 116 MRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA-----DN 170
Query: 278 KKLFLVDLGLA 288
+ + D LA
Sbjct: 171 NDITICDFNLA 181
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR-WRDSSTGQHVEY 302
E +S LE +HSR V+ D+K EN +L + + + D GL D +T +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDK-----DGHIKITDFGLCKEGISDGATMK---- 163
Query: 303 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC 362
F GT Y + R D L + ++ GRLP+ Q + F +
Sbjct: 164 -----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELI 217
Query: 363 KKKMATSPETL 373
+ P TL
Sbjct: 218 LMEEIRFPRTL 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLXQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR-WRDSSTGQHVEY 302
E +S LE +HSR V+ D+K EN +L + + + D GL D +T +
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDK-----DGHIKITDFGLCKEGISDGATMK---- 168
Query: 303 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC 362
F GT Y + R D L + ++ GRLP+ Q + F +
Sbjct: 169 -----XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELI 222
Query: 363 KKKMATSPETL 373
+ P TL
Sbjct: 223 LMEEIRFPRTL 233
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 241 IAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ + + ++ +H G VH D+KPEN L + ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD--EDSKIMISDFGLS 166
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D+Y +VM +G L + + + + + + + + L +H+ G +H D+KP N
Sbjct: 104 DFY-LVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA 160
Query: 269 LGPPETPDEKKLFLVDLGLATRWRDSSTGQHV-EYDQRPDVFRGTVRYA 316
+ ++ +L ++D GLA + G V + + P+V +RY
Sbjct: 161 VN-----EDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYT 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 241 IAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ + + ++ +H G VH D+KPEN L + ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD--EDSKIMISDFGLS 166
>pdb|2Y50|A Chain A, Crystal Structure Of Collagenase G From Clostridium
Histolyticum At 2.80 Angstrom Resolution
pdb|2Y6I|A Chain A, Crystal Structure Of Collagenase G From Clostridium
Histolyticum In Complex With
Isoamylphosphonyl-Gly-Pro-Ala At 3.25 Angstrom
Resolution
Length = 785
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 333 ESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLK 392
E Y F LRG + +GE K + KK+ + E+L ++ Y N +
Sbjct: 615 EKSQYFNTFTLRGTYTGETSKGEFKDWDEMSKKLDGTLESLAKNSWSGYKTLTAYFTNYR 674
Query: 393 FDEEPNYAKYISLFDGIVGPNPDI 416
+ N +Y +F G++ N DI
Sbjct: 675 VTSD-NKVQYDVVFHGVLTDNGDI 697
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR-WRDSSTGQHVEY 302
E +S LE +HSR V+ D+K EN +L + + + D GL D +T +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDK-----DGHIKITDFGLCKEGISDGATMK---- 163
Query: 303 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC 362
F GT Y + R D L + ++ GRLP+ Q + F +
Sbjct: 164 -----XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELI 217
Query: 363 KKKMATSPETL 373
+ P TL
Sbjct: 218 LMEEIRFPRTL 228
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D+Y +VM + L + S E + + + + L+ +HS G VH D+KP N
Sbjct: 121 DFY-LVMPFMQTDLQKIMGME---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA 176
Query: 269 LGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA TG
Sbjct: 177 VN-----EDCELKILDFGLARHADAEMTG 200
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 241 IAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ + + ++ +H G VH D+KPEN L + ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD--EDSKIMISDFGLS 166
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR-WRDSSTGQHVEY 302
E +S LE +HSR V+ D+K EN +L + + + D GL D +T +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDK-----DGHIKITDFGLCKEGISDGATMK---- 163
Query: 303 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC 362
F GT Y + R D L + ++ GRLP+ Q + F +
Sbjct: 164 -----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELI 217
Query: 363 KKKMATSPETL 373
+ P TL
Sbjct: 218 LMEEIRFPRTL 228
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 16/111 (14%)
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA--TRWRDSSTGQHVEYDQ 304
+ ++ +HS H DVKPEN L E + L L D G A T T + Y
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEK--DAVLKLTDFGFAKETTQNALQTPCYTPYYV 196
Query: 305 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
P+V G +Y + D+ SL + LL G P+ G+
Sbjct: 197 APEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGFPPFYSNTGQ 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 114 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 169
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 170 ---EDCELKILDFGLARHTDDEMTG 191
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 105 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 160
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 161 VKSDCT-----LKILDFGLA 175
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 123 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 178
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 179 ---EDCELKILDFGLARHTDDEMTG 200
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 16/131 (12%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR-WRDSSTGQHVEY 302
E +S LE +HSR V+ D+K EN +L + + + D GL D +T +
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDK-----DGHIKITDFGLCKEGISDGATMK---- 166
Query: 303 DQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVC 362
F GT Y + R D L + ++ GRLP+ Q + F +
Sbjct: 167 -----TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELI 220
Query: 363 KKKMATSPETL 373
+ P TL
Sbjct: 221 LMEEIRFPRTL 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 106 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 161
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 162 ---EDCELKILDFGLARHTDDEMTG 183
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 163 XT-----LKILDFGLA 173
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 100 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 155
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 156 ---EDCELKILDFGLARHTDDEMTG 177
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|2Y3U|A Chain A, Crystal Structure Of Apo Collagenase G From Clostridium
Histolyticum At 2.55 Angstrom Resolution
Length = 785
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 333 ESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRLFVEYVVNLK 392
E Y F LRG + +GE K + KK+ + E+L ++ Y N +
Sbjct: 615 EKSQYFNTFTLRGTYTGETSKGEFKDWDEXSKKLDGTLESLAKNSWSGYKTLTAYFTNYR 674
Query: 393 FDEEPNYAKYISLFDGIVGPNPDI 416
+ N +Y +F G++ N DI
Sbjct: 675 VTSD-NKVQYDVVFHGVLTDNGDI 697
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 159
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 160 ---EDCELKILDFGLARHTDDEMTG 181
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 102 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 159 AVN-----EDCELKILDFGLARHTDDEMTG 183
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 110 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 165
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 166 ---EDCELKILDFGLARHTDDEMTG 187
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 102 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 159 AVN-----EDCELKILDFGLARHTDDEMTG 183
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 123 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 178
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 179 ---EDCELKILDFGLARHTDDEMTG 200
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
L+ +HS +H D+KP N + ++ +L ++D GLA D TG
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN-----EDCELKILDFGLARHTADEMTG 188
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLL 269
E +S LE +HSR V+ D+K EN +L
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLML 138
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 107 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 164 AVN-----EDCELKILDFGLARHTDDEMTG 188
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 144 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 201 CT-----LKILDFGLA 211
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 107 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 164 AVN-----EDCELKILDFGLARHTADEMTG 188
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLL 269
E +S LE +HSR V+ D+K EN +L
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLML 138
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 144 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 201 CT-----LKILDFGLA 211
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 124 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 179
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 180 ---EDCELKILDFGLARHTDDEMTG 201
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 115 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 170
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 171 ---EDCELKILDFGLARHTDDEMTG 192
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 124 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 179
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 180 ---EDCELKILDFGLARHTDDEMTG 201
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 109 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 164
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 165 ---EDCELKILDFGLARHTDDEMTG 186
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 116 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 171
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 172 ---EDCELKILDFGLARHTDDEMTG 193
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 103 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 158
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 159 ---EDCELKILDFGLARHTDDEMTG 180
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 99 LVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 155
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 156 XT-----LKILDFGLA 166
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 116 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 171
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 172 ---EDCELKILDFGLARHTDDEMTG 193
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 241 IAIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ + + ++ +H G VH D+KPEN L + ++ K+ + D GL+
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD--EDSKIMISDFGLS 166
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 110 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 165
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 166 ---EDCELKILDFGLARHTDDEMTG 187
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 101 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 156
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 157 ---EDCELKILDFGLARHTDDEMTG 178
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 159
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 160 ---EDCELKILDFGLARHTDDEMTG 181
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 116 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 171
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 172 ---EDCELKILDFGLARHTDDEMTG 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 100 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 155
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 156 ---EDCELKILDFGLARHTDDEMTG 177
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
L+ +HS +H D+KP N + ++ +L ++D GLA D TG
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN-----EDCELKILDFGLARHTADEMTG 188
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 16/111 (14%)
Query: 247 SILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA--TRWRDSSTGQHVEYDQ 304
+ ++ +HS H DVKPEN L E + L L D G A T T + Y
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEK--DAVLKLTDFGFAKETTQNALQTPCYTPYYV 177
Query: 305 RPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGE 355
P+V G +Y + D+ SL + LL G P+ G+
Sbjct: 178 APEVL-GPEKY-----------DKSCDMWSLGVIMYILLCGFPPFYSNTGQ 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 101 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 156
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 157 ---EDCELKILDFGLARHTDDEMTG 178
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 102 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 157
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 158 ---EDCELKILDFGLARHTDDEMTG 179
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D+Y +VM + L + S E + + + + L+ +HS G VH D+KP N
Sbjct: 103 DFY-LVMPFMQTDLQKIMGLK---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA 158
Query: 269 LGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA TG
Sbjct: 159 VN-----EDCELKILDFGLARHADAEMTG 182
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 104 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 160 VKSDCT-----LKILDFGLA 174
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
L+ +HS +H D+KP N + ++ +L ++D GLA D TG
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN-----EDCELKILDFGLARHTDDEMTG 181
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
L+ +HS +H D+KP N + ++ +L ++D GLA D TG
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVN-----EDCELKILDFGLARHTDDEMTG 177
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSR 328
+ T L ++D GLA R + T + P V T Y + LG
Sbjct: 159 VKSDAT-----LKILDFGLA---RTAGTS----FMMTPYVV--TRYYRAPEVILGMGYKE 204
Query: 329 RDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRLFVEYV 388
D+ S+ + +++G + + G ++ V ++ SPE + P R +VE
Sbjct: 205 NVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT-VRTYVE-- 261
Query: 389 VNLKFDEEPNYAKYI--SLFDGIVGP 412
P YA Y LF ++ P
Sbjct: 262 ------NRPKYAGYSFEKLFPDVLFP 281
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 22/160 (13%)
Query: 126 GSPVYRI-------DRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGC 178
GSP Y I +R LG+G FG+VY G TN + + VA+K K C
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEG-----VYTNHKG--EKINVAVK---TCKKDC 64
Query: 179 NYGPPYEWQ----VYNALGGSHGVPRVHFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMS 234
++ + L H V + + + +M + G L N +++
Sbjct: 65 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYG-ELGHYLERNKNSLK 123
Query: 235 IEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPET 274
+ + +++ + + S VH D+ N L+ PE
Sbjct: 124 VLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC 163
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 127 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 182
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 183 ---EDCELKILDFGLARHTDDEMTG 204
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 106 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 163 AVN-----EDCELKILDFGLARHTDDEMTG 187
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 108 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 163
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 164 VKSDCT-----LKILDFGLA 178
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 249 LEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
L+ +HS +H D+KP N + ++ +L ++D GLA D TG
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVN-----EDCELKILDFGLARHTDDEMTG 186
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 166
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLL 269
A E LE +HS+ ++ D+KPEN LL
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILL 139
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 166
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDL 332
T L ++D GLA R + T + P V T Y + LG + D+
Sbjct: 163 CT-----LKILDFGLA---RTACTN----FMMTPYVV--TRYYRAPEVILGMGYAANVDI 208
Query: 333 ESLAYTLIFLLRGRLPWQG 351
S+ + L++G + +QG
Sbjct: 209 WSVGCIMGELVKGCVIFQG 227
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 105 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 161
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 162 CT-----LKILDFGLA 172
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 252 MHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATR 290
+HS H D+KPEN +L P + ++ ++D GLA +
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVP-KPRIKIIDFGLAHK 167
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 163 CT-----LKILDFGLA 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 107 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 164 CT-----LKILDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 106 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 163 CT-----LKILDFGLA 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 107 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 163
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 164 CT-----LKILDFGLA 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 97 DVYI-VMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 152
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 153 VKSDCT-----LKILDFGLA 167
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDAT-----LKILDFGLA 173
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 253 HSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW----RDSSTGQHVEYDQRPDV 308
H R +H D+KP+N L+ E +L + D GLA + R + + + PDV
Sbjct: 117 HDRRVLHRDLKPQNLLIN-----REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 309 FRGTVRYAS 317
G+ +Y++
Sbjct: 172 LMGSKKYST 180
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 253 HSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW----RDSSTGQHVEYDQRPDV 308
H R +H D+KP+N L+ E +L + D GLA + R + + + PDV
Sbjct: 117 HDRRVLHRDLKPQNLLIN-----REGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 309 FRGTVRYAS 317
G+ +Y++
Sbjct: 172 LMGSKKYST 180
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 100 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 157 CT-----LKILDFGLA 167
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+ + +LG GGFG YV R I +T E+ L ++R + C E Q+
Sbjct: 16 WEMKERLGTGGFG--YVLRWIH-QDTGEQVAIKQCRQELSPKNRE-RWC-----LEIQIM 66
Query: 190 NALG-----GSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEM--VACI 241
L + VP K D ++ M+ G L N + ++ + +
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ S L +H +H D+KPEN +L P P ++DLG A
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQP--GPQRLIHKIIDLGYA 171
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 99 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 156 CT-----LKILDFGLA 166
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 130 YRIDRKLGKGGFGQVYVGRRIGPTNTNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVY 189
+ + +LG GGFG YV R I +T E+ L ++R + C E Q+
Sbjct: 17 WEMKERLGTGGFG--YVLRWIH-QDTGEQVAIKQCRQELSPKNRE-RWC-----LEIQIM 67
Query: 190 NALG-----GSHGVPRVHFKGRQGDYYVMVMDML-GPSLWDVWNNNSHTMSIEM--VACI 241
L + VP K D ++ M+ G L N + ++ + +
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 242 AIEAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLA 288
+ S L +H +H D+KPEN +L P P ++DLG A
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVLQP--GPQRLIHKIIDLGYA 172
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N ++
Sbjct: 100 LVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156
Query: 273 ETPDEKKLFLVDLGLA 288
T L ++D GLA
Sbjct: 157 CT-----LKILDFGLA 167
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 253 HSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRW----RDSSTGQHVEYDQRPDV 308
H R +H D+KP+N L+ E +L + D GLA + R + + + PDV
Sbjct: 117 HDRRVLHRDLKPQNLLIN-----REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
Query: 309 FRGTVRYAS 317
G+ +Y++
Sbjct: 172 LMGSKKYST 180
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 209 DYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFL 268
D Y+ VM+++ +L V + E ++ + + + ++ +HS G +H D+KP N +
Sbjct: 103 DVYI-VMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 269 LGPPETPDEKKLFLVDLGLA 288
+ T L ++D GLA
Sbjct: 159 VKSDCT-----LKILDFGLA 173
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V ++G L ++ ++ + V + + + L+ +HS +H D+KP N +
Sbjct: 104 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 159
Query: 273 ETPDEKKLFLVDLGLATRWRDSSTG 297
++ +L ++D GLA D TG
Sbjct: 160 ---EDCELKILDYGLARHTDDEMTG 181
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDAGLARHTDDEMTG 181
>pdb|3B9N|A Chain A, Crystal Structure Of Long-Chain Alkane Monooxygenase
(Lada)
pdb|3B9N|B Chain B, Crystal Structure Of Long-Chain Alkane Monooxygenase
(Lada)
pdb|3B9O|A Chain A, Long-Chain Alkane Monooxygenase (Lada) In Complex With
Coenzyme Fmn
pdb|3B9O|B Chain B, Long-Chain Alkane Monooxygenase (Lada) In Complex With
Coenzyme Fmn
Length = 440
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 468 RRPMKQRYHYNVAD--ARLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFSAQVYEL 525
R P QR+ Y + L+Q +EKG D LF++ V +++ D + Q+
Sbjct: 24 RHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGIYDVYRQSRDTAVREAVQIPVN 83
Query: 526 SPYFL 530
P L
Sbjct: 84 DPLML 88
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V + + L V + N + + + + + H +H D+KP+N L+
Sbjct: 96 LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN-- 153
Query: 273 ETPDEKKLFLVDLGLATRW----RDSSTGQHVEYDQRPDVFRGTVRYAS 317
+ L L D GLA + R + + + PDV G+ +Y++
Sbjct: 154 ---SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 11/76 (14%)
Query: 306 PDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRL-----------PWQGYQG 354
P V A HA L G+ DL + T +LR L PW G +
Sbjct: 240 PQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEW 299
Query: 355 ENKGFLVCKKKMATSP 370
E L+ ++K++ P
Sbjct: 300 ETASRLLTERKLSLEP 315
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 9/109 (8%)
Query: 213 MVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPP 272
+V + + L V + N + + + + + H +H D+KP+N L+
Sbjct: 96 LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN-- 153
Query: 273 ETPDEKKLFLVDLGLATRW----RDSSTGQHVEYDQRPDVFRGTVRYAS 317
+ L L D GLA + R + + + PDV G+ +Y++
Sbjct: 154 ---SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 244 EAISILEKMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSST 296
+ I +E +H + +H D+KP N L+G ++ + + D G++ ++ S
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVG-----EDGHIKIADFGVSNEFKGSDA 192
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 208 GDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENF 267
D Y +V ++G L ++ ++ + V + + + L+ +HS +H D+KP N
Sbjct: 100 NDVY-LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 268 LLGPPETPDEKKLFLVDLGLATRWRDSSTG 297
+ ++ +L ++D GLA D TG
Sbjct: 157 AVN-----EDCELKILDRGLARHTDDEMTG 181
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 81/192 (42%), Gaps = 26/192 (13%)
Query: 193 GGSHGVPRVHFKGRQGDYYVMVMDMLGP--SLWDVWNNNSHTMSIEMVACIAIEAISILE 250
G GV R+ + D +V++++ P L+D + E+ + + +
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVR 171
Query: 251 KMHSRGYVHGDVKPENFLLGPPETPDEKKLFLVDLGLATRWRDSSTGQHVEYDQRPDVFR 310
H+ G +H D+K EN L+ + +L L+D G +D+ F
Sbjct: 172 HCHNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTD----------FD 217
Query: 311 GTVRYAS-----VHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKK 365
GT Y+ H + GR+ + + SL L ++ G +P++ + +G + +++
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAA----VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 273
Query: 366 MATSPETLCCFC 377
+++ + L +C
Sbjct: 274 VSSECQHLIRWC 285
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,559,481
Number of Sequences: 62578
Number of extensions: 957331
Number of successful extensions: 2972
Number of sequences better than 100.0: 527
Number of HSP's better than 100.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 2531
Number of HSP's gapped (non-prelim): 680
length of query: 697
length of database: 14,973,337
effective HSP length: 106
effective length of query: 591
effective length of database: 8,340,069
effective search space: 4928980779
effective search space used: 4928980779
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)