Query 005433
Match_columns 697
No_of_seqs 58 out of 60
Neff 4.6
Searched_HMMs 13730
Date Tue Mar 26 01:15:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005433.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005433hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1flga_ b.70.1.1 (A:) Ethanol 95.6 0.052 3.8E-06 58.0 14.0 74 536-634 464-539 (582)
2 d1kv9a2 b.70.1.1 (A:1-560) Qui 94.9 0.048 3.5E-06 58.1 10.8 75 536-635 436-512 (560)
3 d1kb0a2 b.70.1.1 (A:1-573) Qui 94.1 0.037 2.7E-06 59.1 7.7 81 538-645 457-539 (573)
4 d2ad6a1 b.70.1.1 (A:1-571) Met 86.4 0.19 1.4E-05 53.6 3.9 84 537-646 443-527 (571)
5 d1w6sa_ b.70.1.1 (A:) Methanol 84.1 0.32 2.3E-05 52.2 4.3 82 537-645 452-535 (596)
6 d1kb0a2 b.70.1.1 (A:1-573) Qui 71.8 0.56 4.1E-05 49.6 1.5 33 528-564 487-520 (573)
7 d1flga_ b.70.1.1 (A:) Ethanol 71.8 1.6 0.00011 46.1 5.0 28 131-158 69-97 (582)
8 d2dg1a1 b.68.6.1 (A:6-324) Lac 54.9 7.7 0.00056 36.8 6.0 47 600-647 246-295 (319)
9 d1w6sa_ b.70.1.1 (A:) Methanol 51.8 50 0.0036 34.4 12.5 58 603-661 278-345 (596)
10 d1jv2a4 b.69.8.1 (A:1-438) Int 48.3 5.7 0.00042 39.6 4.0 27 51-77 409-436 (438)
11 d1dava_ a.139.1.1 (A:) Cellulo 42.0 3.4 0.00025 32.4 0.8 18 422-439 2-19 (71)
12 d1tyea_ b.69.8.1 (A:) Integrin 40.3 9 0.00065 38.7 4.0 27 52-78 423-450 (452)
13 d1tyea_ b.69.8.1 (A:) Integrin 40.0 6.6 0.00048 39.7 2.9 30 629-658 423-452 (452)
14 d2ghsa1 b.68.6.1 (A:20-314) Re 34.8 42 0.0031 31.1 7.7 53 591-646 207-260 (295)
15 d1q7fa_ b.68.9.1 (A:) Brain tu 34.7 1E+02 0.0075 27.6 10.4 62 595-659 212-278 (279)
16 d1kv9a2 b.70.1.1 (A:1-560) Qui 32.0 95 0.007 31.6 10.6 153 27-257 43-197 (560)
17 d1pbyb_ b.69.2.2 (B:) Quinohem 30.4 54 0.0039 28.5 7.2 56 595-652 2-61 (337)
18 d1q7fa_ b.68.9.1 (A:) Brain tu 29.4 94 0.0069 27.8 9.1 26 130-155 211-237 (279)
19 d1jv2a4 b.69.8.1 (A:1-438) Int 24.6 17 0.0012 36.0 2.8 25 629-653 410-436 (438)
20 d1k1xa2 b.30.5.8 (A:385-659) 4 23.0 45 0.0033 32.2 5.5 44 52-105 5-48 (275)
21 d1wp5a_ b.68.10.1 (A:) Topoiso 22.7 2E+02 0.015 27.2 10.5 64 528-617 106-170 (323)
22 d1nr0a1 b.69.4.1 (A:2-312) Act 21.6 2.1E+02 0.015 25.5 10.0 104 54-191 152-257 (311)
23 d1suua_ b.68.10.1 (A:) DNA gyr 20.9 1.2E+02 0.009 28.5 8.4 62 528-616 107-169 (304)
No 1
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=95.59 E-value=0.052 Score=58.04 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=48.7
Q ss_pred cCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCccceeeeeeEEeecccCCccceEEE-eecceEEEEc-CCCC
Q 005433 536 NRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA-GGDQEAVVIS-PGGS 613 (697)
Q Consensus 536 s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA-~Ge~~~~ils-~~G~ 613 (697)
..|.|++++..- ++.+||...+..+. +|. |+ ..+ -+|.+ ..+..+--+| .+|+
T Consensus 464 ~~G~l~AiD~~T----G~i~W~~~~~~p~~-----~g~---------ls-----tag--glVF~Gt~dg~l~A~Da~TGe 518 (582)
T d1flga_ 464 HVGSLRAMDPVS----GKVVWEHKEHLPLW-----AGV---------LA-----TAG--NLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp CSEEEEEECTTT----CCEEEEEEESSCCC-----SCC---------EE-----ETT--TEEEEECTTSEEEEEETTTCC
T ss_pred CCCeEEEEcCCC----CcEEeecCCCCCCc-----cce---------eE-----EcC--CeEEEeCCCCeEEEEECCCCc
Confidence 469999999753 48999987654321 111 11 001 12222 3355677788 5999
Q ss_pred EEEEEeCCCCCCcccEEeecC
Q 005433 614 ILTSIDLPAPPTHALVCEDFS 634 (697)
Q Consensus 614 vl~s~~Lp~pP~ap~iv~Dfn 634 (697)
+|=+++||.+..++||.=..|
T Consensus 519 ~LW~~~~~~~~~~~P~ty~~~ 539 (582)
T d1flga_ 519 ELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp EEEEEECSSCCCSCCEEEEET
T ss_pred EeEEEECCCCccccCEEEEEC
Confidence 999999999999999875443
No 2
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=94.89 E-value=0.048 Score=58.14 Aligned_cols=75 Identities=16% Similarity=0.283 Sum_probs=50.7
Q ss_pred cCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCccceeeeeeEEeecccCCccceEE-EeecceEEEEc-CCCC
Q 005433 536 NRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMIL-AGGDQEAVVIS-PGGS 613 (697)
Q Consensus 536 s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~Il-A~Ge~~~~ils-~~G~ 613 (697)
..|.|+++|..- ++.+||...+..+.- | .|+ ..+ -+|. ...+..+--+| .+|+
T Consensus 436 ~~G~l~A~D~~t----Gk~~W~~~~~~~~~g-----g---------~l~-----Tag--glVF~G~~dg~l~A~Da~tGe 490 (560)
T d1kv9a2 436 VSGALLAWDPVK----QKAAWKVPYPTHWNG-----G---------TLS-----TAG--NLVFQGTAAGQMHAYSADKGE 490 (560)
T ss_dssp CEEEEEEEETTT----TEEEEEEEESSSCCC-----C---------EEE-----ETT--TEEEEECTTSEEEEEETTTCC
T ss_pred cccceEEEeCCC----CeEeeeccCCCCCCC-----c---------eeE-----ECC--CEEEEECCCCcEEEEECCCCc
Confidence 349999999753 489999876654421 1 111 111 1222 34466778888 5999
Q ss_pred EEEEEeCCCCCCcccEEeecCC
Q 005433 614 ILTSIDLPAPPTHALVCEDFSN 635 (697)
Q Consensus 614 vl~s~~Lp~pP~ap~iv~Dfng 635 (697)
+|-+++||+...++|+.-..||
T Consensus 491 ~LW~~~l~~~~~~~P~ty~~dG 512 (560)
T d1kv9a2 491 ALWQFEAQSGIVAAPMTFELAG 512 (560)
T ss_dssp EEEEEECSSCCCSCCEEEEETT
T ss_pred EeEEEECCCCccccCEEEEECC
Confidence 9999999999999998755443
No 3
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=94.13 E-value=0.037 Score=59.11 Aligned_cols=81 Identities=19% Similarity=0.221 Sum_probs=52.7
Q ss_pred ceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCccceeeeeeEEeecccCCccceEEE-eecceEEEEc-CCCCEE
Q 005433 538 GEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILA-GGDQEAVVIS-PGGSIL 615 (697)
Q Consensus 538 G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA-~Ge~~~~ils-~~G~vl 615 (697)
|.++++++. .++.+||...+..|.- ++|+ .. .-+|.+ ..+..+..+| .+|++|
T Consensus 457 G~l~AiD~~----tGk~~W~~~~~~p~~g--------------g~ls-----ta--gglVF~G~~dg~l~A~Da~TGe~L 511 (573)
T d1kb0a2 457 GRLLAWDPV----AQKAAWSVEHVSPWNG--------------GTLT-----TA--GNVVFQGTADGRLVAYHAATGEKL 511 (573)
T ss_dssp EEEEEEETT----TTEEEEEEEESSSCCC--------------CEEE-----ET--TTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccEEEeCCC----CCceEeeecCCCCCCC--------------ceEE-----Ec--CCEEEEECCCCeEEEEECCCCcEe
Confidence 889999985 3489999877654421 1111 00 123333 3466788888 599999
Q ss_pred EEEeCCCCCCcccEEeecCCCCcccEEEec
Q 005433 616 TSIDLPAPPTHALVCEDFSNDGLTDVILMT 645 (697)
Q Consensus 616 ~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT 645 (697)
-+++||+...++||.=-. ||.-=|+|++
T Consensus 512 W~~~~~~~~~~~P~ty~~--~GkQYv~v~~ 539 (573)
T d1kb0a2 512 WEAPTGTGVVAAPSTYMV--DGRQYVSVAV 539 (573)
T ss_dssp EEEECSSCCCSCCEEEEE--TTEEEEEEEE
T ss_pred EEEECCCCccccCEEEEE--CCEEEEEEEe
Confidence 999999999999974322 4544344443
No 4
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=86.42 E-value=0.19 Score=53.55 Aligned_cols=84 Identities=15% Similarity=0.150 Sum_probs=52.2
Q ss_pred CceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCccceeeeeeEEeecccCCccceEEEeecceEEEEc-CCCCEE
Q 005433 537 RGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMILAGGDQEAVVIS-PGGSIL 615 (697)
Q Consensus 537 ~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~IlA~Ge~~~~ils-~~G~vl 615 (697)
.|.++|+|+.- ++..||..++..+. +|. |. ..+. =+..+.-+..+--+| .+|++|
T Consensus 443 ~G~l~AiD~~T----G~~~W~~~~~~~~~-----~g~---------l~-----Tagg-lVf~G~~dg~l~A~Da~tGe~l 498 (571)
T d2ad6a1 443 MGQIRAFDLTT----GKAKWTKWEKFAAW-----GGT---------LY-----TKGG-LVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CEEEEEECTTT----CCEEEEEEESSCCC-----SBC---------EE-----ETTT-EEEEECTTSEEEEEETTTCCEE
T ss_pred cccEEEeccCC----CceeeEcCCCCCCC-----cce---------eE-----ecCC-EEEEECCCCeEEEEECCCCcEE
Confidence 48999999763 48999987653321 110 10 0011 012244456677778 599999
Q ss_pred EEEeCCCCCCcccEEeecCCCCcccEEEecC
Q 005433 616 TSIDLPAPPTHALVCEDFSNDGLTDVILMTS 646 (697)
Q Consensus 616 ~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~ 646 (697)
-+++||.+..++||.=-. ||.-=|+|++-
T Consensus 499 W~~~l~~~~~a~P~ty~~--dGkqYi~v~~g 527 (571)
T d2ad6a1 499 WNFKMPSGGIGSPMTYSF--KGKQYIGSMYG 527 (571)
T ss_dssp EEEECSSCCCSCCEEEEE--TTEEEEEEEEC
T ss_pred EEEECCCCceecceEEEE--CCEEEEEEEec
Confidence 999999999999985322 45444444443
No 5
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=84.11 E-value=0.32 Score=52.19 Aligned_cols=82 Identities=15% Similarity=0.225 Sum_probs=53.5
Q ss_pred CceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCccceeeeeeEEeecccCCccceE-EEeecceEEEEc-CCCCE
Q 005433 537 RGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQQMI-LAGGDQEAVVIS-PGGSI 614 (697)
Q Consensus 537 ~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~~~I-lA~Ge~~~~ils-~~G~v 614 (697)
.|.|+++|+. .+...||..++..+.- | .|+ ..+ -+| ....+..+--+| .+|++
T Consensus 452 ~G~l~A~D~~----TG~~~W~~~~~~~~~g-----g---------~ls-----Tag--glVF~G~~Dg~l~A~Da~TGe~ 506 (596)
T d1w6sa_ 452 LGQIKAYNAI----TGDYKWEKMERFAVWG-----G---------TMA-----TAG--DLVFYGTLDGYLKARDSDTGDL 506 (596)
T ss_dssp CEEEEEECTT----TCCEEEEEEESSCCCS-----B---------CEE-----ETT--TEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEeCC----CCceecccCCCCCCcc-----c---------eeE-----ecC--CEEEEECCCCeEEEEECCCCcE
Confidence 4899999985 3478999876654421 1 111 111 122 245566788888 59999
Q ss_pred EEEEeCCCCCCcccEEeecCCCCcccEEEec
Q 005433 615 LTSIDLPAPPTHALVCEDFSNDGLTDVILMT 645 (697)
Q Consensus 615 l~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT 645 (697)
|-+++||+...++||.=-. ||.-=|+|.+
T Consensus 507 LW~~~~~~~~~a~P~tY~~--dGkQYvav~~ 535 (596)
T d1w6sa_ 507 LWKFKIPSGAIGYPMTYTH--KGTQYVAIYY 535 (596)
T ss_dssp EEEEECSSCCCSCCEEEEE--TTEEEEEEEE
T ss_pred eeEEECCCCcccCCeEEEE--CCEEEEEEEe
Confidence 9999999999999986333 5544344443
No 6
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=71.84 E-value=0.56 Score=49.62 Aligned_cols=33 Identities=30% Similarity=0.469 Sum_probs=26.3
Q ss_pred cccEEEE-ecCceEEEecCCCCCCcceeeeeecccccc
Q 005433 528 HGDVVFL-TNRGEVTAYSPGLHGHDAIWQWQLLTDATW 564 (697)
Q Consensus 528 ~~D~vFL-~s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W 564 (697)
.+++||. +.+|.+.|||.. .|..+|..+|++.-
T Consensus 487 agglVF~G~~dg~l~A~Da~----TGe~LW~~~~~~~~ 520 (573)
T d1kb0a2 487 AGNVVFQGTADGRLVAYHAA----TGEKLWEAPTGTGV 520 (573)
T ss_dssp TTTEEEEECTTSEEEEEETT----TCCEEEEEECSSCC
T ss_pred cCCEEEEECCCCeEEEEECC----CCcEeEEEECCCCc
Confidence 3688997 678999999974 45899999887644
No 7
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=71.82 E-value=1.6 Score=46.13 Aligned_cols=28 Identities=25% Similarity=0.380 Sum_probs=23.5
Q ss_pred EEEEEEEcCeEEEEEcCC-chhhhhcccc
Q 005433 131 QVLVVVTSGWSVMCFDHN-LNKLWEANLQ 158 (697)
Q Consensus 131 qvIVVVt~dw~V~cf~hn-Lk~lW~~~l~ 158 (697)
-+|.|.+.+..|+|+|.. .+++|+.+..
T Consensus 69 g~vy~~t~~~~v~AlDa~TG~~lW~~~~~ 97 (582)
T d1flga_ 69 GVIYVTASYSRLFALDAKTGKRLWTYNHR 97 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECC
T ss_pred CEEEEeCCCCeEEEEeCCCCCeEEEEcCC
Confidence 467889999999999875 9999997644
No 8
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=54.88 E-value=7.7 Score=36.81 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=32.8
Q ss_pred eecceEEEEcCCCCEEEEEeCCCCCCc---ccEEeecCCCCcccEEEecCC
Q 005433 600 GGDQEAVVISPGGSILTSIDLPAPPTH---ALVCEDFSNDGLTDVILMTSN 647 (697)
Q Consensus 600 ~Ge~~~~ils~~G~vl~s~~Lp~pP~a---p~iv~DfngDG~nDiIVvT~~ 647 (697)
.|...+.++|++|+++..+++|..+.. .+-..-|. ++.+++++.|.+
T Consensus 246 ~~~g~V~~~~p~G~~l~~i~~P~~~~~~~~~~~~~~~~-~~~~~~~~t~~~ 295 (319)
T d2dg1a1 246 YGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFI-PGTNQLIICSND 295 (319)
T ss_dssp ETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEEC-TTSCEEEEEEEC
T ss_pred cCCCEEEEECCCCcEEEEEeCCCcCCCcCceeeeEEEe-CCCCEEEEEcCC
Confidence 467889999999999999999985432 23344453 345667776653
No 9
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=51.81 E-value=50 Score=34.37 Aligned_cols=58 Identities=16% Similarity=0.152 Sum_probs=38.8
Q ss_pred ceEEEEcC-CCCEEEEEeCCC------CCCcccEEeec-CCCC--cccEEEecCCeEEEEEEeecCCch
Q 005433 603 QEAVVISP-GGSILTSIDLPA------PPTHALVCEDF-SNDG--LTDVILMTSNGVYGFVQTRQPGAL 661 (697)
Q Consensus 603 ~~~~ils~-~G~vl~s~~Lp~------pP~ap~iv~Df-ngDG--~nDiIVvT~~Giygfv~~~~~g~~ 661 (697)
.+++-||. +|+++-.++.-. -...++++.|. +.|| ..=++..+++| +-|++.+.+|.+
T Consensus 278 ~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G-~~~vlDr~tG~~ 345 (596)
T d1w6sa_ 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNG-IVYTLDRTDGAL 345 (596)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTS-EEEEEETTTCCE
T ss_pred ccccccccccccccccccceeccccCCccccceeeeeccccccccccceecccccc-ceeeecCCCCce
Confidence 45677885 999998887633 23445555553 4444 45566678888 558888999954
No 10
>d1jv2a4 b.69.8.1 (A:1-438) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform V [TaxId: 9606]}
Probab=48.35 E-value=5.7 Score=39.63 Aligned_cols=27 Identities=11% Similarity=0.265 Sum_probs=21.7
Q ss_pred CeEEccCCCCceeEEEecC-CCeEEEEe
Q 005433 51 PIVADLNGDGRKEVLVATH-DAKIQVLE 77 (697)
Q Consensus 51 Piv~DldGDG~~evivaT~-d~kl~v~~ 77 (697)
..+.|+||||.+||+|... +.++-+|.
T Consensus 409 s~~~D~dgDG~~DlvVGa~~~d~~~l~r 436 (438)
T d1jv2a4 409 KGATDIDKNGYPDLIVGAFGVDRAILYR 436 (438)
T ss_dssp ECCSCCSSSSSCEEEEEETTTTEEEEEE
T ss_pred eeeeeeCCCCCccEEEEecCCCcEEEEe
Confidence 3567999999999999665 46888876
No 11
>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}
Probab=41.98 E-value=3.4 Score=32.42 Aligned_cols=18 Identities=28% Similarity=0.488 Sum_probs=15.0
Q ss_pred CCCeeeeccCCCceeEEE
Q 005433 422 EGGLHADINGDGVLDHVQ 439 (697)
Q Consensus 422 ~~~l~aDINgDGvlD~V~ 439 (697)
+..+|.|+|+||.||..-
T Consensus 2 s~~l~GDvN~DG~Vd~~D 19 (71)
T d1dava_ 2 STKLYGDVNDDGKVNSTD 19 (71)
T ss_dssp CCCCBSCSSSSSBSSGGG
T ss_pred CCcceeccCCCCCCcHHH
Confidence 467899999999998754
No 12
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform IIb [TaxId: 9606]}
Probab=40.33 E-value=9 Score=38.69 Aligned_cols=27 Identities=15% Similarity=0.364 Sum_probs=22.0
Q ss_pred eEEccCCCCceeEEEecC-CCeEEEEec
Q 005433 52 IVADLNGDGRKEVLVATH-DAKIQVLEP 78 (697)
Q Consensus 52 iv~DldGDG~~evivaT~-d~kl~v~~p 78 (697)
.+.|+|+||.+||+|... ..++-+|..
T Consensus 423 ~~~D~d~DG~~DlvVGa~~~~~~~l~r~ 450 (452)
T d1tyea_ 423 GAVDIDDNGYPDLIVGAYGANQVAVYRA 450 (452)
T ss_dssp EEECSSCSSSCEEEEEEGGGTEEEEECB
T ss_pred eeeeeCCCCCeeEEEEccCCCeEEEEeC
Confidence 467999999999999654 478888864
No 13
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform IIb [TaxId: 9606]}
Probab=39.96 E-value=6.6 Score=39.71 Aligned_cols=30 Identities=23% Similarity=0.254 Sum_probs=19.6
Q ss_pred EEeecCCCCcccEEEecCCeEEEEEEeecC
Q 005433 629 VCEDFSNDGLTDVILMTSNGVYGFVQTRQP 658 (697)
Q Consensus 629 iv~DfngDG~nDiIVvT~~Giygfv~~~~~ 658 (697)
.+.|+|+||..||+|-....=-.|+...||
T Consensus 423 ~~~D~d~DG~~DlvVGa~~~~~~~l~r~~p 452 (452)
T d1tyea_ 423 GAVDIDDNGYPDLIVGAYGANQVAVYRAQP 452 (452)
T ss_dssp EEECSSCSSSCEEEEEEGGGTEEEEECBCC
T ss_pred eeeeeCCCCCeeEEEEccCCCeEEEEeCCC
Confidence 467999999999998654322234444444
No 14
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=34.80 E-value=42 Score=31.14 Aligned_cols=53 Identities=11% Similarity=0.292 Sum_probs=37.8
Q ss_pred CCccceEEEe-ecceEEEEcCCCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecC
Q 005433 591 HDNQQMILAG-GDQEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTS 646 (697)
Q Consensus 591 ~~~~~~IlA~-Ge~~~~ils~~G~vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~ 646 (697)
+...-+.+|. |..++..+|++|+++..++||.+ .|...=|-|...+.|.|.|.
T Consensus 207 D~~GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~---~~T~~~FGG~d~~~LyvTta 260 (295)
T d2ghsa1 207 DAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGK---QTTCPAFIGPDASRLLVTSA 260 (295)
T ss_dssp CTTSCEEEEEETTTEEEEECTTCCEEEEEECSCS---BEEEEEEESTTSCEEEEEEB
T ss_pred cCCCCEEeeeeCCCceEEecCCCcEeeEecCCCC---ceEEEEEeCCCCCEEEEEEC
Confidence 3333566664 55679999999999999999874 23344466777777877765
No 15
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=34.68 E-value=1e+02 Score=27.58 Aligned_cols=62 Identities=16% Similarity=0.411 Sum_probs=36.6
Q ss_pred ceEEEe-ec-ceEEEEcCCCCEEEEEeCCCCCCcccEEeecCCCCcccEEEecCCe---EEEEEEeecCC
Q 005433 595 QMILAG-GD-QEAVVISPGGSILTSIDLPAPPTHALVCEDFSNDGLTDVILMTSNG---VYGFVQTRQPG 659 (697)
Q Consensus 595 ~~IlA~-Ge-~~~~ils~~G~vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVvT~~G---iygfv~~~~~g 659 (697)
.+++|- +. ..+.+.+++|+.+.++..+.....|- -.-++.||. |+|...+. +|=|+|....|
T Consensus 212 ~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~~p~-~vav~~dG~--l~V~~~n~~v~~fr~~~~~~~~ 278 (279)
T d1q7fa_ 212 EILIADNHNNFNLTIFTQDGQLISALESKVKHAQCF-DVALMDDGS--VVLASKDYRLYIYRYVQLAPVG 278 (279)
T ss_dssp CEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEE-EEEEETTTE--EEEEETTTEEEEEECSCCCCTT
T ss_pred eEEEEECCCCcEEEEECCCCCEEEEEeCCCCCCCEe-EEEEeCCCc--EEEEeCCCeEEEEEeeeecCCC
Confidence 466664 23 35778899999999987665433332 234667884 55544343 44455554444
No 16
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=32.02 E-value=95 Score=31.62 Aligned_cols=153 Identities=18% Similarity=0.251 Sum_probs=86.7
Q ss_pred eeeeeeecccccCCCccccccCCCCeEEccCCCCceeEEEecCCCeEEEEecccCCccccccccccceeeccccccccc-
Q 005433 27 SFREAWFHLSEEYPIKFDADRLPPPIVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRI- 105 (697)
Q Consensus 27 s~~~aw~~~~d~~p~~~~~~~lp~Piv~DldGDG~~evivaT~d~kl~v~~p~~~~~~~~f~~~~~~~e~Sll~~~~~~- 105 (697)
.++.+|..-.. -. ...-.-|||+| | -|.++|.+++|--++..++ ++-...- .+..-.+.....
T Consensus 43 ~L~~aW~~~~~---~~--~~~~stPiv~~----g--~vyv~t~~~~v~AlDa~tG--~~lW~~~---~~~~~~~~~~~~~ 106 (560)
T d1kv9a2 43 SLGLAWYMDLD---NT--RGLEATPLFHD----G--VIYTSMSWSRVIAVDAASG--KELWRYD---PEVAKVKARTSCC 106 (560)
T ss_dssp GEEEEEEEECS---CC--SCCCCCCEEET----T--EEEEEEGGGEEEEEETTTC--CEEEEEC---CCCCGGGGGGCTT
T ss_pred cceEEEEEECC---CC--CCcEeCCEEEC----C--EEEEECCCCeEEEEeCCCC--CEEEEEC---CCCCccccccccc
Confidence 45677864222 11 12337899998 2 5677888899999997765 2222100 000000000000
Q ss_pred ccCCceeEEeecccccccccCCCceEEEEEEEcCeEEEEEc-CCchhhhhccccccCCCCCcceeEEEEEeeceeccCCc
Q 005433 106 ASGRRAVAMATGVIDRTYRQGQPLKQVLVVVTSGWSVMCFD-HNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDT 184 (697)
Q Consensus 106 ~~grrpVAlaaGy~~p~~~~~~~~~qvIVVVt~dw~V~cf~-hnLk~lW~~~l~~~~p~~~~~~EvsisIs~~~i~~~D~ 184 (697)
..-.|.++.. +..|++.+.+..|+|+| .+.+++|+....+.... .. ++-+|.. ..
T Consensus 107 ~~~~~~~~~~--------------~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~-~~-----~~~~p~v----~~ 162 (560)
T d1kv9a2 107 DAVNRGVALW--------------GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKP-YS-----ITGAPRV----VK 162 (560)
T ss_dssp CSCCCCCEEE--------------BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSS-CB-----CCSCCEE----ET
T ss_pred cccccCccee--------------CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccc-ee-----eeeeeee----ec
Confidence 0011222222 33588899999999997 68899999887654332 11 1112221 46
Q ss_pred eEEEEeeeecccCCCCCChhhhhhhhhhhhhhhhcchhhhhhcccCCCcccceeEEeeecCCccceeccccCC
Q 005433 185 GLVIVGGRMEMQPHTIMDPFEEIGLAEKNAEQHRRSASEKEASENSGTVDLRHFAFYAFAGRSGLLRWSRKNE 257 (697)
Q Consensus 185 G~VIVGgr~e~~~~~~~d~f~e~~~~~~~~e~hr~~~~~k~~~~~~g~~~~~HfsyyAf~g~tG~~RW~h~~~ 257 (697)
|.||||.... + .+. .-..+|||.+||+++|+....
T Consensus 163 ~~vivg~~~~------------------------------~----~~~----~G~v~a~D~~TG~~~W~~~t~ 197 (560)
T d1kv9a2 163 GKVIIGNGGA------------------------------E----YGV----RGFVSAYDADTGKLAWRFYTV 197 (560)
T ss_dssp TEEEECCBCT------------------------------T----TCC----BCEEEEEETTTCCEEEEEESS
T ss_pred Ccccccccce------------------------------e----ccc----cceEEEEECCCceEEeeeeec
Confidence 8899986550 0 111 125789999999999998754
No 17
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=30.41 E-value=54 Score=28.55 Aligned_cols=56 Identities=14% Similarity=0.142 Sum_probs=38.5
Q ss_pred ceEEEeec-ceEEEEcC-CCCEEEEEeCCCCCCcccEEeecCCCCcccEEEe-cCCe-EEEE
Q 005433 595 QMILAGGD-QEAVVISP-GGSILTSIDLPAPPTHALVCEDFSNDGLTDVILM-TSNG-VYGF 652 (697)
Q Consensus 595 ~~IlA~Ge-~~~~ils~-~G~vl~s~~Lp~pP~ap~iv~DfngDG~nDiIVv-T~~G-iygf 652 (697)
+++++++. ..+.|+|. +++++.+++++.....| .-.-|+.||.. ++|. +.+| |+.|
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~-~~i~~spDg~~-l~v~~~~~~~v~v~ 61 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTP-MVPMVAPGGRI-AYATVNKSESLVKI 61 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCC-CCEEECTTSSE-EEEEETTTTEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCc-cEEEECCCCCE-EEEEECCCCeEEEE
Confidence 46666664 68999994 99999999998765543 23468889853 3333 3444 7777
No 18
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=29.43 E-value=94 Score=27.85 Aligned_cols=26 Identities=8% Similarity=0.223 Sum_probs=17.0
Q ss_pred eEEEEEEE-cCeEEEEEcCCchhhhhc
Q 005433 130 KQVLVVVT-SGWSVMCFDHNLNKLWEA 155 (697)
Q Consensus 130 ~qvIVVVt-~dw~V~cf~hnLk~lW~~ 155 (697)
.+++|.-. .+..|.+|+.+.+.+++-
T Consensus 211 G~i~Vad~~~~~~v~~f~~~G~~~~~~ 237 (279)
T d1q7fa_ 211 GEILIADNHNNFNLTIFTQDGQLISAL 237 (279)
T ss_dssp CCEEEEECSSSCEEEEECTTSCEEEEE
T ss_pred CeEEEEECCCCcEEEEECCCCCEEEEE
Confidence 45444322 356899999999877543
No 19
>d1jv2a4 b.69.8.1 (A:1-438) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform V [TaxId: 9606]}
Probab=24.60 E-value=17 Score=36.03 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=19.2
Q ss_pred EEeecCCCCcccEEEecC--CeEEEEE
Q 005433 629 VCEDFSNDGLTDVILMTS--NGVYGFV 653 (697)
Q Consensus 629 iv~DfngDG~nDiIVvT~--~Giygfv 653 (697)
.+.|||+||..||||-.. +.+|-|.
T Consensus 410 ~~~D~dgDG~~DlvVGa~~~d~~~l~r 436 (438)
T d1jv2a4 410 GATDIDKNGYPDLIVGAFGVDRAILYR 436 (438)
T ss_dssp CCSCCSSSSSCEEEEEETTTTEEEEEE
T ss_pred eeeeeCCCCCccEEEEecCCCcEEEEe
Confidence 467999999999998664 3566664
No 20
>d1k1xa2 b.30.5.8 (A:385-659) 4-alpha-glucanotransferase, C-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=23.03 E-value=45 Score=32.19 Aligned_cols=44 Identities=27% Similarity=0.443 Sum_probs=30.4
Q ss_pred eEEccCCCCceeEEEecCCCeEEEEecccCCccccccccccceeeccccccccc
Q 005433 52 IVADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRI 105 (697)
Q Consensus 52 iv~DldGDG~~evivaT~d~kl~v~~p~~~~~~~~f~~~~~~~e~Sll~~~~~~ 105 (697)
=+.|+|=||+.||++.|..- .-++.|..+ |- +.|+++.+.+..+
T Consensus 5 ~~~DfD~DG~~Ev~l~~~~~-~~~~~p~~G----G~-----l~Eld~k~~~~Nl 48 (275)
T d1k1xa2 5 KILDVDFDGRAEIMVENDGF-IATIKPHYG----GS-----IFELSSKRKAVNY 48 (275)
T ss_dssp EEECSSSSSSCEEEEECSSE-EEEEETTTT----TE-----EEEEEETTTTEET
T ss_pred ceeccCCCCcceEEEEcCcE-EEEEeeCCC----CE-----EEEEeccccccch
Confidence 47899999999999998774 556667654 22 2566665554444
No 21
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=22.72 E-value=2e+02 Score=27.20 Aligned_cols=64 Identities=20% Similarity=0.280 Sum_probs=41.4
Q ss_pred cccEEEEecCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCccceeeeeeEEeecccCCcc-ceEEEeecceEE
Q 005433 528 HGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQ-QMILAGGDQEAV 606 (697)
Q Consensus 528 ~~D~vFL~s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~-~~IlA~Ge~~~~ 606 (697)
...++|+|.+|.+-...-. .|.+... .=.+.++.|..++.. .+.++.++++++
T Consensus 106 ~~~l~~~Tk~G~iKr~~l~----------------~f~~~~~----------~~g~~~i~L~~~D~l~~v~~~~~~~~i~ 159 (323)
T d1wp5a_ 106 NGYFLFVTRNGMVKKTELK----------------HYKAQRY----------SKPLTGINLKNDDQVVDVHLTDGMNELF 159 (323)
T ss_dssp SCEEEEEETTSEEEEEEGG----------------GGCCSCC----------SSCEECSCCCTTCCEEEEEEECSCSEEE
T ss_pred ceeEEEEeehhheeeccHH----------------Hhhhhhc----------cchhhhccccccccccceeccCCCeEEE
Confidence 4789999999988777532 1111100 012455666555443 666788888899
Q ss_pred EEcCCCCEEEE
Q 005433 607 VISPGGSILTS 617 (697)
Q Consensus 607 ils~~G~vl~s 617 (697)
|++.+|+.+.-
T Consensus 160 l~t~~G~~lrf 170 (323)
T d1wp5a_ 160 LVTHNGYALWF 170 (323)
T ss_dssp EEETTSEEEEE
T ss_pred EEEecceeeEe
Confidence 99999998654
No 22
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=21.58 E-value=2.1e+02 Score=25.52 Aligned_cols=104 Identities=7% Similarity=-0.007 Sum_probs=0.0
Q ss_pred EccCCCCceeEEEecCCCeEEEEecccCCccccccccccceeecccccccccccCCceeEEeecccccccc-cCCCceEE
Q 005433 54 ADLNGDGRKEVLVATHDAKIQVLEPHARRVDEGFSEARVLAEVSLLPDKIRIASGRRAVAMATGVIDRTYR-QGQPLKQV 132 (697)
Q Consensus 54 ~DldGDG~~evivaT~d~kl~v~~p~~~~~~~~f~~~~~~~e~Sll~~~~~~~~grrpVAlaaGy~~p~~~-~~~~~~qv 132 (697)
++.+.||..-++.++.|++|.+|+.... +.+..-.++..+... .-.+..+.
T Consensus 152 v~~~~~~~~~l~sgs~d~~i~i~d~~~~----------------------------~~~~~~~~~~~~i~~v~~~p~~~~ 203 (311)
T d1nr0a1 152 VDFKPSRPFRIISGSDDNTVAIFEGPPF----------------------------KFKSTFGEHTKFVHSVRYNPDGSL 203 (311)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETTTB----------------------------EEEEEECCCSSCEEEEEECTTSSE
T ss_pred ccccccceeeeccccccccccccccccc----------------------------ccccccccccccccccccCccccc
Q ss_pred EEEEEcCeEEEEE-cCCchhhhhccccccCCCCCcceeEEEEEeeceeccCCceEEEEee
Q 005433 133 LVVVTSGWSVMCF-DHNLNKLWEANLQEDFPPNAHHREIAISISNYTLKHGDTGLVIVGG 191 (697)
Q Consensus 133 IVVVt~dw~V~cf-~hnLk~lW~~~l~~~~p~~~~~~EvsisIs~~~i~~~D~G~VIVGg 191 (697)
|++...|..|..+ -.+.+.+++-+.......++...-.++..+| |.-.++.|+
T Consensus 204 l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~------~~~~l~tgs 257 (311)
T d1nr0a1 204 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP------DGTKIASAS 257 (311)
T ss_dssp EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT------TSSEEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccCC------CCCEEEEEe
No 23
>d1suua_ b.68.10.1 (A:) DNA gyrase A C-terminal domain {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=20.91 E-value=1.2e+02 Score=28.47 Aligned_cols=62 Identities=13% Similarity=0.218 Sum_probs=41.5
Q ss_pred cccEEEEecCceEEEecCCCCCCcceeeeeeccccccccCCCCCCCCccceeeeeeEEeecccCCcc-ceEEEeecceEE
Q 005433 528 HGDVVFLTNRGEVTAYSPGLHGHDAIWQWQLLTDATWSNLPSPSGMTEASTVVPTLKAFSLRVHDNQ-QMILAGGDQEAV 606 (697)
Q Consensus 528 ~~D~vFL~s~G~VTs~~~~~~g~~~~~~Wq~~T~a~W~~~~~~~g~~e~~~~~PsL~af~lr~~~~~-~~IlA~Ge~~~~ 606 (697)
+.+++|+|.+|.|-...-. .|.+. .--.+.+..|..++.. .+.+..+++.++
T Consensus 107 ~~~l~~~T~~G~iKr~~l~----------------~f~~~-----------~~~~~~a~kL~~~D~lv~v~~~~~~~~v~ 159 (304)
T d1suua_ 107 DAYLLLTTASGKIARFEST----------------DFKAV-----------KSRGVIVIKLNDKDFVTSAEIVFKDEKVI 159 (304)
T ss_dssp TCEEEEEETTSEEEEEEGG----------------GGCC---------------CEECBCCCTTCCEEEEEEECTTCEEE
T ss_pred cceEEEEEehhhhhhcccc----------------hhhcc-----------ccccceeecccchhhccccccccccceeE
Confidence 4789999999998887521 12111 0002556666655543 666778888999
Q ss_pred EEcCCCCEEE
Q 005433 607 VISPGGSILT 616 (697)
Q Consensus 607 ils~~G~vl~ 616 (697)
+++.+|+.+.
T Consensus 160 ~~t~~G~~lr 169 (304)
T d1suua_ 160 CLSKKGSAFI 169 (304)
T ss_dssp EEETTSEEEE
T ss_pred eeccccceee
Confidence 9999999875
Done!