BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005444
(696 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S28|B Chain B, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S28|C Chain C, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S28|D Chain D, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S28|E Chain E, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S28|F Chain F, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S28|G Chain G, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S28|H Chain H, The Crystal Structure Of Sucrose Synthase-1 In Complex
With A Breakdown Product Of The Udp-Glucose
pdb|3S29|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S29|B Chain B, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S29|C Chain C, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S29|D Chain D, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S29|E Chain E, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S29|F Chain F, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S29|G Chain G, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S29|H Chain H, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications
Length = 816
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/617 (71%), Positives = 521/617 (84%), Gaps = 3/617 (0%)
Query: 79 LMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMM 138
LML++ KAE++L++L +T + +FE + +G E+GWGD AE VL+M+
Sbjct: 194 LMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMI 253
Query: 139 HLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVR 198
LLLD+L+APDP TLE FLGR+PMVFNVVILSPHGYF Q NVLG PDTGGQVVYILDQVR
Sbjct: 254 RLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVR 313
Query: 199 ALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEK 258
ALE EML RIK+QGL+I P+ILI+TRL+PDA GTTC +RLERV +E+ ILRVPFR+EK
Sbjct: 314 ALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEK 373
Query: 259 GILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318
GI+R+WISRF+VWPYLET+TED E++ EL G PD IIGNYSDGNLVASLLA+K+G+TQ
Sbjct: 374 GIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQ 433
Query: 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 378
CTIAHALEKTKYPDSDIYWKK D+KYHFSCQFTAD+ AMN+ DFIITST+QEIAG+K TV
Sbjct: 434 CTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETV 493
Query: 379 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438
GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+E+++RLT H IE+L
Sbjct: 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEEL 553
Query: 439 LFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498
L+ +N EH+ L D+ KPI+F+MARLD VKN++GLVE YGKN++LREL NLVVV G
Sbjct: 554 LYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGG-- 611
Query: 499 DVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 557
D K SKD EE AE++KM++L++ YKL+GQFRWI++Q +R RNGELYRYI DTKGAFVQP
Sbjct: 612 DRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQP 671
Query: 558 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKC 617
A YEAFGLTVVEAMTCGLPTFATC GGPAEII HG SGFHIDPYH DQAA+ +ADFF KC
Sbjct: 672 ALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKC 731
Query: 618 KENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFY 677
KE+PSHW +IS GGL+RI E+YTW+IYS+RL+TL GVYGFWK+VS L+R E RRYLEMFY
Sbjct: 732 KEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFY 791
Query: 678 ILKFRDLVKSVPLASEN 694
LK+R L ++VPLA ++
Sbjct: 792 ALKYRPLAQAVPLAQDD 808
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 6 LSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLR 65
++R+ S RER+ +TL RNE+++LLSR A+GKGILQ + +I E + + ++ R+ L
Sbjct: 8 ITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEAL--PEQTRKKLE 65
Query: 66 DGPFSEVIKSAQ 77
GPF +++KS Q
Sbjct: 66 GGPFFDLLKSTQ 77
>pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S27|B Chain B, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S27|C Chain C, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S27|D Chain D, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S27|E Chain E, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S27|F Chain F, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S27|G Chain G, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications.
pdb|3S27|H Chain H, The Crystal Structure Of Sucrose Synthase-1 From
Arabidopsis Thaliana And Its Functional Implications
Length = 816
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/599 (71%), Positives = 506/599 (84%), Gaps = 3/599 (0%)
Query: 97 KAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKF 156
KAE++L++L +T + +FE + +G E+GWGD AE VL+ + LLLD+L+APDP TLE F
Sbjct: 212 KAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDXIRLLLDLLEAPDPCTLETF 271
Query: 157 LGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 216
LGR+P VFNVVILSPHGYF Q NVLG PDTGGQVVYILDQVRALE E L RIK+QGL+I
Sbjct: 272 LGRVPXVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEXLQRIKQQGLNIK 331
Query: 217 PKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLET 276
P+ILI+TRL+PDA GTTC +RLERV +E+ ILRVPFR+EKGI+R+WISRF+VWPYLET
Sbjct: 332 PRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLET 391
Query: 277 FTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIY 336
+TED E++ EL G PD IIGNYSDGNLVASLLA+K+G+TQCTIAHALEKTKYPDSDIY
Sbjct: 392 YTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIY 451
Query: 337 WKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 396
WKK D+KYHFSCQFTAD+ A N+ DFIITST+QEIAG+K TVGQYESHTAFTLPGLYRVV
Sbjct: 452 WKKLDDKYHFSCQFTADIFAXNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVV 511
Query: 397 HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 456
HGIDVFDPKFNIVSPGAD IYFPY+E+++RLT H IE+LL+ +N EH+ L D+
Sbjct: 512 HGIDVFDPKFNIVSPGADXSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKK 571
Query: 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNK-SKDREEIAEIEKM 515
KPI+F+ ARLD VKN++GLVE YGKN++LREL NLVVV G D K SKD EE AE +K
Sbjct: 572 KPILFTXARLDRVKNLSGLVEWYGKNTRLRELANLVVVGG--DRRKESKDNEEKAEXKKX 629
Query: 516 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL 575
++L++ YKL+GQFRWI++Q +R RNGELYRYI DTKGAFVQPA YEAFGLTVVEA TCGL
Sbjct: 630 YDLIEEYKLNGQFRWISSQXDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAXTCGL 689
Query: 576 PTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 635
PTFATC GGPAEII HG SGFHIDPYH DQAA+ +ADFF KCKE+PSHW +IS GGL+RI
Sbjct: 690 PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749
Query: 636 YERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASEN 694
E+YTW+IYS+RL+TL GVYGFWK+VS L+R E RRYLE FY LK+R L ++VPLA ++
Sbjct: 750 EEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEXFYALKYRPLAQAVPLAQDD 808
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 2 AAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGR 61
A ++R+ S RER+ +TL RNE+++LLSR A+GKGILQ + +I E + + ++ R
Sbjct: 4 AERXITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEAL--PEQTR 61
Query: 62 QNLRDGPFSEVIKSAQ 77
+ L GPF +++KS Q
Sbjct: 62 KKLEGGPFFDLLKSTQ 77
>pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of
Halothermothrix Orenii
pdb|2R66|A Chain A, Complex Structure Of Sucrose Phosphate Synthase (Sps)-F6p
Of Halothermothrix Orenii
pdb|2R68|A Chain A, Complex Structure Of Sucrose Phosphate Synthase (Sps)-S6p
Of Halothermothrix Orenii
Length = 499
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 226/490 (46%), Gaps = 64/490 (13%)
Query: 165 NVVILSPHGYFGQANVLGL--PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIV 222
+V L+P G F A+ PD GGQ+VY+ E+ L + G+ + I+
Sbjct: 9 HVAFLNPQGNFDPADSYWTEHPDFGGQLVYV--------KEVSLALAEMGVQVD----II 56
Query: 223 TRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 282
TR I D + ++ T I+R+PF +K ++ + ++WPYL + +
Sbjct: 57 TRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKI- 110
Query: 283 SEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIY---WKK 339
E FP + +Y DG L LL G+ H+L K ++ +K+
Sbjct: 111 INFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKE 170
Query: 340 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 399
DE++ F + A+ + M+ AD II ST QE GQY SH LYR +
Sbjct: 171 MDERFKFHRRIIAERLTMSYADKIIVSTSQE------RFGQY-SHD------LYRGAVNV 217
Query: 400 DVFDPKFNIVSPGADMDIY-FPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSK- 457
+ D KF+++ PG + ++ Y +K + I + L + +G S+R +
Sbjct: 218 ED-DDKFSVIPPGVNTRVFDGEYGDK------IKAKITKYL------ERDLG--SERMEL 262
Query: 458 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKD-----REEIAEI 512
P + + +RLD KN GLVE Y +N +L++ NLV+ I+ N +D +EE +
Sbjct: 263 PAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIE-NPFEDYSRAGQEEKEIL 321
Query: 513 EKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMT 572
K+ EL+ G+ + + G Y Y+A F +FYE FGL VEAM
Sbjct: 322 GKIIELIDNNDCRGKVSMFPLNSQQELAG-CYAYLASKGSVFALTSFYEPFGLAPVEAMA 380
Query: 573 CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632
GLP T +GGPAEI++ G G +DP P+ A + F E+ W + G
Sbjct: 381 SGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF----ESEETWSAYQEKGK 436
Query: 633 KRIYERYTWK 642
+R+ ERYTW+
Sbjct: 437 QRVEERYTWQ 446
>pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|B Chain B, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|C Chain C, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|D Chain D, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|E Chain E, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|F Chain F, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|G Chain G, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|H Chain H, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|I Chain I, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|J Chain J, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|K Chain K, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558.
pdb|2JJM|L Chain L, Crystal Structure Of A Family Gt4 Glycosyltransferase From
Bacillus Anthracis Orf Ba1558
Length = 394
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH----PDQAAELMAD 612
E+FGL ++EAM CG+P T GG E+I+HG +G+ + DQA +L+ D
Sbjct: 295 ESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD 350
>pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
pdb|3MBO|B Chain B, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
pdb|3MBO|C Chain C, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
pdb|3MBO|D Chain D, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
pdb|3MBO|E Chain E, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
pdb|3MBO|F Chain F, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
pdb|3MBO|G Chain G, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
pdb|3MBO|H Chain H, Crystal Structure Of The Glycosyltransferase Babsha Bound
With Udp And L-Malate
Length = 414
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH----PDQAAELMAD 612
E+FGL ++EAM CG+P T GG E+I+HG +G+ + DQA +L+ D
Sbjct: 315 ESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD 370
>pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P.
Horikoshi
pdb|2X6Q|B Chain B, Crystal Structure Of Trehalose Synthase Tret From P.
Horikoshi
pdb|2X6R|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P.
Horikoshi Produced By Soaking In Trehalose
pdb|2X6R|B Chain B, Crystal Structure Of Trehalose Synthase Tret From P.
Horikoshi Produced By Soaking In Trehalose
Length = 416
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 78/197 (39%), Gaps = 37/197 (18%)
Query: 408 IVSPGADMDIYFPYSEKQKRL--TALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR 465
I+ P D P SEK L T + +E+ DPE KPI+ ++R
Sbjct: 198 IMPPSID-----PLSEKNVELKQTEILRILERFDVDPE-------------KPIITQVSR 239
Query: 466 LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525
D K + ++E Y K + V L++V V D E EK T +
Sbjct: 240 FDPWKGIFDVIEIYRKVKEKIPGVQLLLVG----VMAHDDPEGWIYFEK------TLRKI 289
Query: 526 GQFRWIAAQTN----RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 581
G+ + TN AR ++ +D +Q + E FGLTV EAM G P
Sbjct: 290 GEDYDVKVLTNLIGVHAREVNAFQRASDV---ILQMSIREGFGLTVTEAMWKGKPVIGRA 346
Query: 582 HGGPAEIIEHGASGFHI 598
GG I G +GF +
Sbjct: 347 VGGIKFQIVDGETGFLV 363
>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb'
Bound To Gdp (Orthorhombic Crystal Form)
pdb|3OKP|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb'
Bound To Gdp-Man (Orthorhombic Crystal Form)
Length = 394
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASG 595
N +++ A T+G + E G+ +EA CG+P A GG E + A+G
Sbjct: 268 NTLAAADIFAMPARTRGGGLD---VEGLGIVYLEAQACGVPVIAGTSGGAPETVTP-ATG 323
Query: 596 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
++ D+ +EL+ + ++P + G + ++W+I ERL +
Sbjct: 324 LVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNI 375
>pdb|2XA1|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P.
Horikoshii (Seleno Derivative)
pdb|2XA1|B Chain B, Crystal Structure Of Trehalose Synthase Tret From P.
Horikoshii (Seleno Derivative)
Length = 416
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 72/180 (40%), Gaps = 26/180 (14%)
Query: 420 PYSEKQKRL--TALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 477
P SEK L T + +E+ DPE KPI+ ++R D K + ++E
Sbjct: 205 PLSEKNVELKQTEILRILERFDVDPE-------------KPIITQVSRFDPWKGIFDVIE 251
Query: 478 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK-MHELMKTYKLDGQFRWIAAQTN 536
Y K + V L++V V D E EK + ++ + Y + I
Sbjct: 252 IYRKVKEKIPGVQLLLVG----VXAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVH-- 305
Query: 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF 596
AR ++ +D +Q + E FGLTV EA G P GG I G +GF
Sbjct: 306 -AREVNAFQRASDV---ILQXSIREGFGLTVTEAXWKGKPVIGRAVGGIKFQIVDGETGF 361
>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In
Complex With Gdp-Man (Triclinic Crystal Form)
pdb|3OKA|B Chain B, Crystal Structure Of Corynebacterium Glutamicum Pimb' In
Complex With Gdp-Man (Triclinic Crystal Form)
Length = 381
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASG 595
N +++ A T+G + E G+ +EA CG+P A GG E + A+G
Sbjct: 268 NTLAAADIFAMPARTRGGGLD---VEGLGIVYLEAQACGVPVIAGTSGGAPETVTP-ATG 323
Query: 596 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651
++ D+ +EL+ + ++P + G + ++W+I ERL +
Sbjct: 324 LVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNI 375
>pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a
From P.Horishiki In Complex With Udp
pdb|2XMP|B Chain B, Crystal Structure Of Trehalose Synthase Tret Mutant E326a
From P.Horishiki In Complex With Udp
pdb|2XA2|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a
From P.Horikoshii In Complex With Udpg
pdb|2XA2|B Chain B, Crystal Structure Of Trehalose Synthase Tret Mutant E326a
From P.Horikoshii In Complex With Udpg
pdb|2XA9|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a
From P.Horikoshii In Complex With Udpg
pdb|2XA9|B Chain B, Crystal Structure Of Trehalose Synthase Tret Mutant E326a
From P.Horikoshii In Complex With Udpg
Length = 416
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 77/197 (39%), Gaps = 37/197 (18%)
Query: 408 IVSPGADMDIYFPYSEKQKRL--TALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR 465
I+ P D P SEK L T + +E+ DPE KPI+ ++R
Sbjct: 198 IMPPSID-----PLSEKNVELKQTEILRILERFDVDPE-------------KPIITQVSR 239
Query: 466 LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525
D K + ++E Y K + V L++V V D E EK T +
Sbjct: 240 FDPWKGIFDVIEIYRKVKEKIPGVQLLLVG----VMAHDDPEGWIYFEK------TLRKI 289
Query: 526 GQFRWIAAQTN----RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 581
G+ + TN AR ++ +D +Q + FGLTV EAM G P
Sbjct: 290 GEDYDVKVLTNLIGVHAREVNAFQRASDV---ILQMSIRAGFGLTVTEAMWKGKPVIGRA 346
Query: 582 HGGPAEIIEHGASGFHI 598
GG I G +GF +
Sbjct: 347 VGGIKFQIVDGETGFLV 363
>pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The
First Step In Mycothiol Biosynthesis. Organism:
Corynebacterium Glutamicum- Apo (Open) Structure.
pdb|3C48|B Chain B, Structure Of The Retaining Glycosyltransferase Msha: The
First Step In Mycothiol Biosynthesis. Organism:
Corynebacterium Glutamicum- Apo (Open) Structure
Length = 438
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 158/437 (36%), Gaps = 88/437 (20%)
Query: 182 GLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241
G D+GG VYIL L +QG+++ I TR ++G E V
Sbjct: 37 GTGDSGGMNVYILSTATEL--------AKQGIEVD----IYTRATRPSQG-------EIV 77
Query: 242 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS 301
E+ ++ + +G+ S+ ++ L FT + S E + D I +Y
Sbjct: 78 RVAENLRVINIAAGPYEGL-----SKEELPTQLAAFTGGMLSFTRREKVTY-DLIHSHYW 131
Query: 302 DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD 361
V LL I AH L K D E Q D NAD
Sbjct: 132 LSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVD-----NAD 186
Query: 362 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP- 420
+ +T +E + ++H D + ++VSPGAD+++Y P
Sbjct: 187 VLAVNTQEE---------------------MQDLMHHYDADPDRISVVSPGADVELYSPG 225
Query: 421 ---YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 477
+E+ +R + + + F VG L P V +K + L +
Sbjct: 226 NDRATERSRRELGIPLHTKVVAF--------VGRLQPFKGPQVL-------IKAVAALFD 270
Query: 478 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 537
+ LR +++ G N + D + + ++ + R++ +
Sbjct: 271 -RDPDRNLR----VIICGGPSGPNATPD--------TYRHMAEELGVEKRIRFLDPRPP- 316
Query: 538 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597
+ +YR AD P+F E+FGL +EA G P A GG + G +G
Sbjct: 317 SELVAVYR-AADI---VAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLL 372
Query: 598 IDPYHPDQAAELMADFF 614
+D + P A+ +A
Sbjct: 373 VDGHSPHAWADALATLL 389
>pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The
First Step In Mycothiol Biosynthesis. Organism :
Corynebacterium Glutamicum- Complex With Udp
pdb|3C4Q|B Chain B, Structure Of The Retaining Glycosyltransferase Msha : The
First Step In Mycothiol Biosynthesis. Organism :
Corynebacterium Glutamicum- Complex With Udp
pdb|3C4V|A Chain A, Structure Of The Retaining Glycosyltransferase Msha:the
First Step In Mycothiol Biosynthesis. Organism:
Corynebacterium Glutamicum : Complex With Udp And
1l-Ins-1- P.
pdb|3C4V|B Chain B, Structure Of The Retaining Glycosyltransferase Msha:the
First Step In Mycothiol Biosynthesis. Organism:
Corynebacterium Glutamicum : Complex With Udp And
1l-Ins-1- P
Length = 426
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 557 PAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 614
P+F E+FGL +EA G P A GG + G +G +D + P A+ +A
Sbjct: 312 PSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL 369
>pdb|2IW1|A Chain A, Crystal Structure Of Waag, A Glycosyltransferase Involved
In Lipopolysaccharide Biosynthesis
Length = 374
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 554 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMAD 612
+ PA+ EA G+ ++EA+T GLP T G A I G I +P+ +Q E++
Sbjct: 274 LLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRK 333
Query: 613 FFGKC------KENPSHWKKISD 629
+ EN H+ D
Sbjct: 334 ALTQSPLRMAWAENARHYADTQD 356
>pdb|2IV7|A Chain A, Crystal Structure Of Waag, A Glycosyltransferase Involved
In Lipopolysaccharide Biosynthesis
Length = 374
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 556 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMADFF 614
PA+ EA G+ ++EA+T GLP T G A I G I +P+ +Q E++
Sbjct: 276 HPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL 335
Query: 615 GKC------KENPSHWKKISD 629
+ EN H+ D
Sbjct: 336 TQSPLRXAWAENARHYADTQD 356
>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I
Catalytic Domain
pdb|3VUF|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I
Catalytic Domain In Complex With Adp
Length = 536
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 80/215 (37%), Gaps = 42/215 (19%)
Query: 389 LPGLYRVVHGIDV--FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS---IEQLLFDPE 443
L G+ +V+G+DV +DP K K +TA + + IE + E
Sbjct: 272 LTGITGIVNGMDVSEWDP------------------SKDKYITAKYDATTAIEAKALNKE 313
Query: 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKS 503
G DR P++ + RL+ K + + + EL+ V + K
Sbjct: 314 ALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMA------AAIPELMQEDVQIVLLGTGKK 367
Query: 504 KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563
K EK+ + M+ K G+ R + N L I P+ +E
Sbjct: 368 K-------FEKLLKSMEE-KYPGKVRAVVK-----FNAPLAHLIMAGADVLAVPSRFEPC 414
Query: 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 598
GL ++ M G P GG + + G +GFH+
Sbjct: 415 GLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHM 449
>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
pdb|2BIS|B Chain B, Structure Of Glycogen Synthase From Pyrococcus Abyssi
pdb|2BIS|C Chain C, Structure Of Glycogen Synthase From Pyrococcus Abyssi
Length = 440
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
E R + + + P+++E FGL +EAM G A+ GG +II + +G +
Sbjct: 323 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAG 381
Query: 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647
P + A + + + S +++ K+ ++W+ +ER
Sbjct: 382 DPGELANAILKALELSRSDLSKFRE----NCKKRAMSFSWEKSAER 423
>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase
With Open And Closed Conformations
pdb|3FRO|B Chain B, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase
With Open And Closed Conformations
pdb|3FRO|C Chain C, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase
With Open And Closed Conformations
Length = 439
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
E R + + + P+++E FGL +EAM G A+ GG +II + +G +
Sbjct: 322 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAG 380
Query: 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647
P + A + + + S +++ K+ ++W+ +ER
Sbjct: 381 DPGELANAILKALELSRSDLSKFRE----NCKKRAMSFSWEKSAER 422
>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From
Pyrococcus Abyssi
pdb|3L01|B Chain B, Crystal Structure Of Monomeric Glycogen Synthase From
Pyrococcus Abyssi
Length = 428
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
E R + + + P+++E FGL +EAM G A+ GG +II + +G +
Sbjct: 322 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAG 380
Query: 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647
P + A + + + S +++ K+ ++W+ +ER
Sbjct: 381 DPGELANAILKALELSRSDLSKFRE----NCKKRAMSFSWEKSAER 422
>pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From
Pyrococcus Abyssi
Length = 200
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601
E R + + + P+++E FGL +EAM G A+ GG +II + +G +
Sbjct: 107 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAG 165
Query: 602 HPDQAA 607
P + A
Sbjct: 166 DPGELA 171
>pdb|2F9F|A Chain A, Crystal Structure Of The Putative Mannosyl Transferase
(Wbaz-1)from Archaeoglobus Fulgidus, Northeast
Structural Genomics Target Gr29a
Length = 177
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN 620
E FGLT +EA G P A GG E + + +G+ ++ E++ D K +N
Sbjct: 108 EDFGLTPIEAXASGKPVIAVNEGGFKETVINEKTGYLVNA----DVNEII-DAXKKVSKN 162
Query: 621 PSHWKK 626
P +KK
Sbjct: 163 PDKFKK 168
>pdb|3GF3|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaconyl-Coa
pdb|3GF7|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Apoprotein
pdb|3GLM|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|B Chain B, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|C Chain C, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GLM|D Chain D, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Crotonyl-Coa
pdb|3GMA|A Chain A, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaryl-Coa
pdb|3GMA|B Chain B, Glutaconyl-Coa Decarboxylase A Subunit From Clostridium
Symbiosum Co-Crystallized With Glutaryl-Coa
Length = 588
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 25/157 (15%)
Query: 128 GDTAE--HVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 185
GD AE +L + L+ ++ +LE + + + V+ P G NV +
Sbjct: 423 GDEAEKAELLGLGQSLIYSIENSKLPSLEITIRKASAAAHYVLGGPQG--NNTNVFSI-G 479
Query: 186 TGGQVVYIL---DQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 242
TG Y++ A+ + L++ K+ G D+ P I + +I
Sbjct: 480 TGACEYYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMI---------------- 523
Query: 243 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTE 279
+T R + +EKG++ + + +V PY++ FTE
Sbjct: 524 -QMYTDKSRPKYCTEKGMVDEIVDMTEVRPYIQAFTE 559
>pdb|1V71|A Chain A, Crystal Structure Of S.pombe Serine Racemase
pdb|1WTC|A Chain A, Crystal Structure Of S.ponbe Serine Racemase Complex With
Amppcp
pdb|2ZPU|A Chain A, Crystal Structure Of Modified Serine Racemase From
S.Pombe.
pdb|2ZR8|A Chain A, Crystal Structure Of Modified Serine Racemase Complexed
With Serine
Length = 323
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 12 IRERVEDTLSVHRNELVSLLSRYVAQGKGILQP 44
I+E+V+D L+V EL+ L Y A+ K +++P
Sbjct: 250 IKEKVDDILTVSDEELIDCLKFYAARMKIVVEP 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,501,714
Number of Sequences: 62578
Number of extensions: 946215
Number of successful extensions: 1906
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1870
Number of HSP's gapped (non-prelim): 35
length of query: 696
length of database: 14,973,337
effective HSP length: 106
effective length of query: 590
effective length of database: 8,340,069
effective search space: 4920640710
effective search space used: 4920640710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)