Query 005444
Match_columns 696
No_of_seqs 392 out of 3678
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 23:32:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005444.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005444hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 2E-160 5E-165 1376.2 60.9 696 1-696 2-812 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 5E-151 1E-155 1299.3 62.8 668 24-691 1-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 2E-125 5E-130 1009.3 23.2 435 7-441 1-550 (550)
4 KOG0853 Glycosyltransferase [C 100.0 1.4E-61 2.9E-66 527.1 24.7 491 80-682 1-495 (495)
5 TIGR02468 sucrsPsyn_pln sucros 100.0 1.6E-59 3.5E-64 550.0 40.2 456 163-655 169-671 (1050)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 2.1E-52 4.6E-57 467.5 41.0 426 164-652 1-438 (439)
7 PRK00654 glgA glycogen synthas 100.0 5.1E-45 1.1E-49 410.9 36.8 427 164-654 1-462 (466)
8 PLN02939 transferase, transfer 100.0 1.7E-43 3.7E-48 409.5 46.6 458 141-654 455-966 (977)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 1.1E-43 2.4E-48 392.0 36.6 399 166-654 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 1.6E-43 3.5E-48 399.6 37.5 430 164-654 1-472 (473)
11 PLN02316 synthase/transferase 100.0 8.7E-43 1.9E-47 410.6 40.3 406 163-654 587-1033(1036)
12 PRK14098 glycogen synthase; Pr 100.0 6.6E-43 1.4E-47 394.7 36.8 439 161-654 4-485 (489)
13 cd03800 GT1_Sucrose_synthase T 100.0 3.8E-42 8.2E-47 376.2 39.5 397 165-649 1-397 (398)
14 PRK14099 glycogen synthase; Pr 100.0 1.1E-41 2.4E-46 384.3 37.8 435 163-654 3-478 (485)
15 cd03796 GT1_PIG-A_like This fa 100.0 2.8E-41 6.1E-46 372.9 37.2 365 165-654 1-367 (398)
16 PRK10307 putative glycosyl tra 100.0 2.8E-41 6.1E-46 374.3 36.9 396 164-654 1-407 (412)
17 cd03791 GT1_Glycogen_synthase_ 100.0 1.8E-41 3.9E-46 382.8 35.8 432 165-653 1-475 (476)
18 PLN02871 UDP-sulfoquinovose:DA 100.0 6.2E-40 1.3E-44 369.6 37.8 374 161-654 56-434 (465)
19 PRK15427 colanic acid biosynth 100.0 1.1E-39 2.3E-44 361.3 38.4 281 290-654 116-405 (406)
20 TIGR02149 glgA_Coryne glycogen 100.0 1.3E-39 2.9E-44 356.4 38.1 378 164-654 1-386 (388)
21 cd04962 GT1_like_5 This family 100.0 3.6E-39 7.7E-44 350.0 39.1 366 164-654 1-370 (371)
22 PRK15484 lipopolysaccharide 1, 100.0 2.8E-38 6E-43 347.2 39.4 374 162-654 1-377 (380)
23 TIGR03088 stp2 sugar transfera 100.0 9.7E-38 2.1E-42 340.8 36.4 365 165-654 3-372 (374)
24 cd03818 GT1_ExpC_like This fam 100.0 1.3E-37 2.8E-42 343.4 37.7 365 203-649 15-395 (396)
25 KOG1111 N-acetylglucosaminyltr 100.0 8.9E-39 1.9E-43 328.6 24.7 363 164-653 1-365 (426)
26 cd03805 GT1_ALG2_like This fam 100.0 1.5E-37 3.2E-42 340.7 36.2 386 164-648 1-392 (392)
27 PRK15179 Vi polysaccharide bio 100.0 3.1E-37 6.7E-42 357.0 37.0 434 117-653 238-692 (694)
28 cd05844 GT1_like_7 Glycosyltra 100.0 2.7E-37 5.8E-42 334.8 32.1 281 290-650 80-366 (367)
29 cd04955 GT1_like_6 This family 100.0 1.8E-36 4E-41 326.8 37.6 361 165-653 1-363 (363)
30 PRK15490 Vi polysaccharide bio 100.0 6.5E-37 1.4E-41 340.1 33.8 399 182-653 169-574 (578)
31 cd03792 GT1_Trehalose_phosphor 100.0 3.4E-36 7.4E-41 329.0 34.9 287 290-654 83-371 (372)
32 cd03819 GT1_WavL_like This fam 100.0 2.8E-36 6.1E-41 324.7 33.0 347 185-644 8-355 (355)
33 cd03821 GT1_Bme6_like This fam 100.0 2.6E-35 5.7E-40 315.0 36.1 372 165-649 1-374 (375)
34 cd03799 GT1_amsK_like This is 100.0 7.4E-35 1.6E-39 313.0 35.9 272 290-648 77-355 (355)
35 cd03802 GT1_AviGT4_like This f 100.0 8.3E-35 1.8E-39 310.7 36.0 333 164-653 1-335 (335)
36 cd03795 GT1_like_4 This family 100.0 1.5E-34 3.3E-39 310.7 36.3 354 165-645 1-357 (357)
37 cd03801 GT1_YqgM_like This fam 100.0 2.6E-34 5.7E-39 304.5 36.3 374 165-653 1-374 (374)
38 cd03794 GT1_wbuB_like This fam 100.0 2.4E-34 5.2E-39 308.7 35.6 387 165-649 1-394 (394)
39 cd03814 GT1_like_2 This family 100.0 2.1E-34 4.5E-39 308.6 35.1 363 165-653 1-364 (364)
40 cd03813 GT1_like_3 This family 100.0 2.4E-35 5.1E-40 333.2 28.3 293 290-653 171-475 (475)
41 cd04951 GT1_WbdM_like This fam 100.0 6.4E-34 1.4E-38 306.3 37.1 282 290-653 77-359 (360)
42 cd03822 GT1_ecORF704_like This 100.0 1E-33 2.3E-38 303.8 38.3 358 165-653 1-366 (366)
43 cd03812 GT1_CapH_like This fam 100.0 1.9E-34 4.1E-39 310.8 31.8 345 165-635 1-346 (358)
44 cd03807 GT1_WbnK_like This fam 100.0 5E-34 1.1E-38 303.9 34.5 363 165-653 1-365 (365)
45 PRK09922 UDP-D-galactose:(gluc 100.0 1.6E-34 3.5E-39 314.7 29.9 268 290-653 82-354 (359)
46 cd03817 GT1_UGDG_like This fam 100.0 1.1E-33 2.4E-38 302.8 34.7 369 165-653 1-372 (374)
47 cd03816 GT1_ALG1_like This fam 100.0 1.7E-33 3.7E-38 312.8 36.4 392 162-649 2-411 (415)
48 PLN02846 digalactosyldiacylgly 100.0 8.1E-34 1.8E-38 314.3 33.6 369 162-654 3-391 (462)
49 cd03825 GT1_wcfI_like This fam 100.0 1.1E-33 2.4E-38 305.1 33.3 342 164-653 1-363 (365)
50 PRK10125 putative glycosyl tra 100.0 7E-34 1.5E-38 314.4 31.7 277 290-653 92-403 (405)
51 PLN02949 transferase, transfer 100.0 2.6E-33 5.7E-38 313.7 36.5 395 158-654 28-456 (463)
52 cd03808 GT1_cap1E_like This fa 100.0 6.9E-33 1.5E-37 294.0 36.0 356 165-649 1-358 (359)
53 cd03809 GT1_mtfB_like This fam 100.0 1.7E-33 3.7E-38 302.1 31.6 364 165-649 1-364 (365)
54 cd03806 GT1_ALG11_like This fa 100.0 7.3E-33 1.6E-37 308.0 36.2 366 186-646 13-418 (419)
55 cd03820 GT1_amsD_like This fam 100.0 7E-33 1.5E-37 292.7 34.2 345 165-649 1-347 (348)
56 cd03798 GT1_wlbH_like This fam 100.0 2.6E-32 5.6E-37 290.6 37.9 362 186-653 13-375 (377)
57 cd03823 GT1_ExpE7_like This fa 100.0 1.6E-32 3.5E-37 293.0 34.8 354 165-653 1-358 (359)
58 TIGR03087 stp1 sugar transfera 100.0 2.7E-33 5.8E-38 309.2 26.6 282 290-653 102-395 (397)
59 cd03811 GT1_WabH_like This fam 100.0 4.5E-32 9.7E-37 286.6 32.2 351 165-640 1-352 (353)
60 TIGR02918 accessory Sec system 100.0 2.7E-32 5.8E-37 308.3 31.9 279 290-653 209-498 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 1.4E-31 3E-36 296.8 30.7 276 290-649 125-406 (407)
62 COG0297 GlgA Glycogen synthase 100.0 2.4E-31 5.3E-36 294.7 31.1 438 164-655 1-478 (487)
63 PLN02275 transferase, transfer 100.0 3.5E-30 7.5E-35 282.2 30.0 250 290-613 98-370 (371)
64 cd03804 GT1_wbaZ_like This fam 100.0 1.6E-30 3.4E-35 281.5 26.8 264 290-648 81-350 (351)
65 cd04949 GT1_gtfA_like This fam 100.0 6.2E-30 1.3E-34 278.8 30.2 273 291-648 98-372 (372)
66 PHA01630 putative group 1 glyc 100.0 2.5E-29 5.4E-34 270.7 26.6 258 298-655 52-331 (331)
67 PLN02501 digalactosyldiacylgly 100.0 1.2E-28 2.6E-33 276.5 32.6 274 290-654 432-709 (794)
68 cd03793 GT1_Glycogen_synthase_ 100.0 5.8E-28 1.2E-32 268.9 30.2 329 290-654 146-586 (590)
69 PRK00726 murG undecaprenyldiph 100.0 1.9E-26 4.1E-31 250.8 30.7 344 164-653 2-356 (357)
70 PHA01633 putative glycosyl tra 100.0 8.5E-26 1.8E-30 241.6 30.4 224 356-649 89-334 (335)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 3.9E-26 8.4E-31 256.7 25.5 312 292-650 131-457 (460)
72 cd03785 GT1_MurG MurG is an N- 99.9 2.8E-25 6.1E-30 240.2 30.2 324 185-646 8-349 (350)
73 TIGR01133 murG undecaprenyldip 99.9 6.8E-25 1.5E-29 237.0 28.9 315 203-646 19-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 1.1E-24 2.5E-29 243.5 28.1 312 292-651 127-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 2.2E-23 4.8E-28 232.3 29.9 285 291-653 123-418 (425)
76 PRK13609 diacylglycerol glucos 99.9 1.3E-22 2.8E-27 222.8 27.8 264 290-654 102-371 (380)
77 PF00534 Glycos_transf_1: Glyc 99.9 8.3E-24 1.8E-28 205.4 15.4 160 454-634 12-172 (172)
78 PLN03063 alpha,alpha-trehalose 99.9 2E-22 4.4E-27 238.5 27.1 309 292-653 147-476 (797)
79 cd04950 GT1_like_1 Glycosyltra 99.9 1.9E-21 4E-26 213.3 31.4 266 290-653 100-370 (373)
80 TIGR02094 more_P_ylases alpha- 99.9 3.1E-21 6.6E-26 221.1 27.7 347 281-652 151-598 (601)
81 PRK14501 putative bifunctional 99.9 1.6E-21 3.5E-26 230.8 25.1 310 292-654 133-462 (726)
82 PLN02605 monogalactosyldiacylg 99.9 9.2E-21 2E-25 208.5 28.8 264 290-652 98-379 (382)
83 cd01635 Glycosyltransferase_GT 99.9 1.1E-20 2.5E-25 188.6 23.2 121 462-598 109-229 (229)
84 COG0438 RfaG Glycosyltransfera 99.9 2.2E-19 4.8E-24 187.6 29.0 290 293-654 84-376 (381)
85 PRK13608 diacylglycerol glucos 99.8 1.9E-19 4.1E-24 198.7 27.0 263 290-653 102-370 (391)
86 KOG1387 Glycosyltransferase [C 99.8 5.6E-18 1.2E-22 174.2 30.3 394 158-652 37-456 (465)
87 TIGR02398 gluc_glyc_Psyn gluco 99.8 6.7E-18 1.5E-22 188.6 29.7 314 292-651 132-479 (487)
88 TIGR00236 wecB UDP-N-acetylglu 99.8 3.2E-18 6.8E-23 187.1 23.6 276 290-650 84-363 (365)
89 PRK09814 beta-1,6-galactofuran 99.8 1.3E-17 2.9E-22 180.2 25.4 246 291-647 62-324 (333)
90 cd04299 GT1_Glycogen_Phosphory 99.8 2.6E-17 5.7E-22 192.0 28.7 342 287-652 243-687 (778)
91 PRK00025 lpxB lipid-A-disaccha 99.8 3.9E-17 8.5E-22 179.1 25.6 250 290-635 83-356 (380)
92 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 7.2E-17 1.6E-21 175.6 23.0 250 291-627 87-344 (363)
93 PLN03064 alpha,alpha-trehalose 99.7 2.7E-16 5.9E-21 186.0 25.6 309 292-652 231-559 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 2.8E-15 6.2E-20 170.1 26.3 169 457-651 319-518 (519)
95 PF05693 Glycogen_syn: Glycoge 99.7 4.3E-15 9.4E-20 165.3 22.8 328 292-654 142-581 (633)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 2.2E-15 4.7E-20 140.4 9.4 130 457-614 2-133 (135)
97 KOG2941 Beta-1,4-mannosyltrans 99.6 1.3E-12 2.8E-17 135.2 28.4 382 205-649 33-436 (444)
98 TIGR00215 lpxB lipid-A-disacch 99.6 7.7E-13 1.7E-17 145.9 25.1 250 290-632 87-363 (385)
99 PF13524 Glyco_trans_1_2: Glyc 99.4 1.9E-12 4.2E-17 113.0 10.9 92 553-650 1-92 (92)
100 PF00982 Glyco_transf_20: Glyc 99.4 3.2E-11 7E-16 135.4 22.9 311 292-652 141-472 (474)
101 PRK10117 trehalose-6-phosphate 99.3 2.4E-10 5.3E-15 127.1 25.4 312 292-653 123-452 (474)
102 PF13439 Glyco_transf_4: Glyco 99.3 2E-11 4.3E-16 117.3 12.9 167 184-419 9-177 (177)
103 COG0707 MurG UDP-N-acetylgluco 99.3 7.7E-09 1.7E-13 112.4 33.4 252 290-649 89-352 (357)
104 PRK12446 undecaprenyldiphospho 99.3 4.1E-09 8.9E-14 114.9 28.8 248 290-651 89-348 (352)
105 PLN02205 alpha,alpha-trehalose 99.2 1.3E-09 2.8E-14 130.3 26.1 312 294-652 203-549 (854)
106 COG0380 OtsA Trehalose-6-phosp 99.2 3.1E-09 6.7E-14 117.9 26.7 318 292-652 147-477 (486)
107 PF13579 Glyco_trans_4_4: Glyc 99.2 1.6E-11 3.4E-16 116.0 7.6 160 187-412 1-160 (160)
108 TIGR02919 accessory Sec system 99.2 1.7E-09 3.8E-14 120.4 24.4 135 473-635 291-426 (438)
109 PF08323 Glyco_transf_5: Starc 99.1 5.3E-10 1.1E-14 115.8 11.1 184 165-374 1-230 (245)
110 cd03784 GT1_Gtf_like This fami 99.1 3.3E-08 7.1E-13 109.4 25.3 124 454-614 237-370 (401)
111 PF09314 DUF1972: Domain of un 99.0 9.8E-09 2.1E-13 100.8 14.7 177 163-414 1-185 (185)
112 TIGR01426 MGT glycosyltransfer 99.0 5.4E-07 1.2E-11 99.6 30.2 112 524-652 273-390 (392)
113 TIGR03492 conserved hypothetic 98.9 6.4E-07 1.4E-11 99.3 26.0 163 459-650 208-394 (396)
114 PF13528 Glyco_trans_1_3: Glyc 98.8 5.1E-07 1.1E-11 96.6 22.9 116 455-611 191-315 (318)
115 COG1519 KdtA 3-deoxy-D-manno-o 98.8 6.8E-06 1.5E-10 89.1 28.8 156 457-637 231-403 (419)
116 TIGR03568 NeuC_NnaA UDP-N-acet 98.8 1.1E-06 2.5E-11 96.3 23.0 265 291-650 92-363 (365)
117 PF13477 Glyco_trans_4_2: Glyc 98.6 4.9E-07 1.1E-11 84.5 12.3 123 203-367 15-139 (139)
118 TIGR00661 MJ1255 conserved hyp 98.6 1.1E-05 2.3E-10 87.0 22.6 69 525-603 228-302 (321)
119 PHA03392 egt ecdysteroid UDP-g 98.4 0.00025 5.5E-09 81.1 29.8 138 457-633 297-445 (507)
120 KOG3742 Glycogen synthase [Car 98.4 8.4E-07 1.8E-11 95.0 7.8 103 546-650 497-608 (692)
121 TIGR03590 PseG pseudaminic aci 98.4 3.9E-05 8.5E-10 81.1 20.3 98 457-583 171-269 (279)
122 PF13844 Glyco_transf_41: Glyc 98.3 2E-05 4.4E-10 87.9 18.0 185 443-654 273-466 (468)
123 PF02350 Epimerase_2: UDP-N-ac 98.3 6.5E-05 1.4E-09 81.9 21.1 250 292-627 67-325 (346)
124 COG1819 Glycosyl transferases, 98.1 0.00021 4.6E-09 79.5 20.6 159 455-653 236-400 (406)
125 PF04007 DUF354: Protein of un 98.1 0.00076 1.6E-08 72.9 22.9 63 543-613 242-307 (335)
126 cd04300 GT1_Glycogen_Phosphory 98.0 0.00016 3.6E-09 85.0 17.1 144 448-600 521-682 (797)
127 PF02684 LpxB: Lipid-A-disacch 98.0 0.00093 2E-08 73.2 22.0 143 454-625 181-345 (373)
128 PRK14986 glycogen phosphorylas 98.0 0.00012 2.7E-09 86.0 15.2 144 448-600 534-695 (815)
129 PLN02448 UDP-glycosyltransfera 97.9 0.0094 2E-07 67.6 29.2 140 455-633 273-429 (459)
130 TIGR02093 P_ylase glycogen/sta 97.8 0.00037 8.1E-09 81.8 14.9 144 448-600 518-679 (794)
131 COG0763 LpxB Lipid A disacchar 97.7 0.002 4.3E-08 69.6 18.4 199 290-580 83-289 (381)
132 COG4641 Uncharacterized protei 97.6 0.0043 9.4E-08 66.7 19.2 118 525-653 236-360 (373)
133 COG3914 Spy Predicted O-linked 97.5 0.0034 7.3E-08 70.5 17.0 180 447-653 422-612 (620)
134 PRK14985 maltodextrin phosphor 97.5 0.00099 2.1E-08 78.3 12.7 143 448-600 520-681 (798)
135 COG0058 GlgP Glucan phosphoryl 97.4 0.0034 7.4E-08 73.3 16.5 144 449-601 479-631 (750)
136 PRK02797 4-alpha-L-fucosyltran 97.4 0.033 7.1E-07 58.9 22.1 166 458-654 146-316 (322)
137 COG0381 WecB UDP-N-acetylgluco 97.4 0.05 1.1E-06 59.1 23.5 275 290-653 90-369 (383)
138 PRK01021 lpxB lipid-A-disaccha 97.3 0.024 5.1E-07 65.3 21.1 197 290-580 308-513 (608)
139 PRK10017 colanic acid biosynth 97.3 0.17 3.7E-06 56.8 27.3 97 516-627 297-399 (426)
140 PF00343 Phosphorylase: Carboh 97.2 0.062 1.3E-06 63.0 23.2 144 448-600 435-596 (713)
141 PLN03007 UDP-glucosyltransfera 97.1 0.52 1.1E-05 53.9 29.3 77 526-614 345-438 (482)
142 PF12000 Glyco_trans_4_3: Gkyc 97.0 0.0039 8.5E-08 60.8 9.3 108 281-418 56-170 (171)
143 PF07429 Glyco_transf_56: 4-al 96.9 0.17 3.7E-06 54.3 21.7 127 458-598 185-313 (360)
144 PLN02554 UDP-glycosyltransfera 96.8 1.3 2.9E-05 50.5 30.3 79 526-614 342-438 (481)
145 PLN02208 glycosyltransferase f 96.8 1.4 2.9E-05 49.9 33.1 66 564-633 339-415 (442)
146 PLN02410 UDP-glucoronosyl/UDP- 96.7 1.4 3E-05 49.9 28.4 92 526-632 324-421 (451)
147 PRK14089 ipid-A-disaccharide s 96.6 0.043 9.2E-07 59.9 14.8 91 457-580 168-260 (347)
148 PLN02173 UDP-glucosyl transfer 96.6 1.9 4.1E-05 48.8 30.8 91 526-633 317-420 (449)
149 COG4671 Predicted glycosyl tra 96.5 0.56 1.2E-05 50.4 21.6 133 455-614 218-363 (400)
150 PLN02863 UDP-glucoronosyl/UDP- 96.4 2.4 5.2E-05 48.4 32.0 117 526-656 343-473 (477)
151 PLN00414 glycosyltransferase f 96.3 2.8 6E-05 47.5 32.7 86 537-634 319-417 (446)
152 PLN02210 UDP-glucosyl transfer 96.3 2.9 6.3E-05 47.5 31.9 70 537-614 331-413 (456)
153 PF06258 Mito_fiss_Elm1: Mitoc 96.2 0.29 6.3E-06 52.6 18.0 109 455-584 145-259 (311)
154 PF08288 PIGA: PIGA (GPI ancho 96.2 0.016 3.5E-07 49.5 6.6 71 245-326 14-86 (90)
155 KOG1050 Trehalose-6-phosphate 96.1 0.52 1.1E-05 56.1 21.1 152 455-615 274-439 (732)
156 COG3980 spsG Spore coat polysa 96.1 0.15 3.2E-06 53.1 14.4 140 456-632 158-305 (318)
157 COG1817 Uncharacterized protei 95.7 2.4 5.1E-05 45.0 21.2 111 468-614 199-312 (346)
158 PF04101 Glyco_tran_28_C: Glyc 95.7 0.00055 1.2E-08 66.3 -5.2 91 526-631 55-155 (167)
159 PF11440 AGT: DNA alpha-glucos 95.4 2 4.3E-05 44.8 18.9 145 454-614 177-351 (355)
160 COG3660 Predicted nucleoside-d 95.3 1.5 3.2E-05 45.4 17.8 112 454-585 159-276 (329)
161 PF04464 Glyphos_transf: CDP-G 93.9 0.48 1E-05 51.9 11.6 131 449-614 186-334 (369)
162 PLN02992 coniferyl-alcohol glu 92.7 22 0.00048 40.7 31.7 76 527-614 339-425 (481)
163 PLN02562 UDP-glycosyltransfera 92.0 4.7 0.0001 45.7 16.1 88 525-626 327-419 (448)
164 PF00201 UDPGT: UDP-glucoronos 91.9 0.48 1E-05 54.1 8.3 130 456-627 276-416 (500)
165 cd03789 GT1_LPS_heptosyltransf 91.0 1.6 3.4E-05 45.8 10.5 98 459-580 124-223 (279)
166 PLN02670 transferase, transfer 90.8 9.5 0.0002 43.5 17.0 85 564-653 367-464 (472)
167 PF05159 Capsule_synth: Capsul 90.4 15 0.00032 38.3 17.2 121 454-604 114-242 (269)
168 KOG0853 Glycosyltransferase [C 89.1 1.4 3E-05 49.9 8.4 100 354-487 204-303 (495)
169 PLN03004 UDP-glycosyltransfera 88.9 10 0.00022 43.0 15.4 83 527-625 335-429 (451)
170 COG2327 WcaK Polysaccharide py 88.8 42 0.00092 37.1 26.8 88 526-626 266-357 (385)
171 PLN02555 limonoid glucosyltran 87.8 9.8 0.00021 43.5 14.4 95 525-634 336-442 (480)
172 PLN03015 UDP-glucosyl transfer 87.8 56 0.0012 37.3 29.8 51 564-614 363-424 (470)
173 PRK10422 lipopolysaccharide co 87.5 5.6 0.00012 43.3 11.9 103 456-580 183-287 (352)
174 PF01075 Glyco_transf_9: Glyco 87.4 3.7 7.9E-05 42.0 9.9 103 455-580 104-208 (247)
175 PLN02152 indole-3-acetate beta 86.1 13 0.00027 42.3 14.0 141 456-614 261-415 (455)
176 PF12038 DUF3524: Domain of un 85.5 4.2 9.1E-05 39.4 8.2 111 290-413 57-168 (168)
177 PLN02167 UDP-glycosyltransfera 84.7 25 0.00053 40.2 15.6 78 527-614 341-432 (475)
178 TIGR02195 heptsyl_trn_II lipop 84.6 8.7 0.00019 41.3 11.5 100 456-580 173-276 (334)
179 PF10087 DUF2325: Uncharacteri 84.1 2.9 6.3E-05 36.7 6.2 84 491-589 2-90 (97)
180 PLN02764 glycosyltransferase f 83.4 48 0.001 37.7 17.0 86 537-632 324-420 (453)
181 TIGR03609 S_layer_CsaB polysac 82.7 49 0.0011 34.9 16.1 86 472-580 190-275 (298)
182 PLN00164 glucosyltransferase; 81.8 31 0.00068 39.5 15.0 66 564-633 367-445 (480)
183 TIGR02201 heptsyl_trn_III lipo 81.5 14 0.0003 40.0 11.5 102 457-580 182-285 (344)
184 TIGR02193 heptsyl_trn_I lipopo 80.6 17 0.00037 38.7 11.8 99 456-580 179-279 (319)
185 COG0859 RfaF ADP-heptose:LPS h 79.7 15 0.00032 39.9 10.9 98 457-580 176-276 (334)
186 PF10933 DUF2827: Protein of u 78.4 28 0.0006 38.0 12.1 159 455-640 188-349 (364)
187 PF11997 DUF3492: Domain of un 77.0 4.6 9.9E-05 42.5 5.8 78 291-370 171-256 (268)
188 PF03401 TctC: Tripartite tric 76.6 43 0.00094 35.2 13.1 150 458-632 79-244 (274)
189 PLN02207 UDP-glycosyltransfera 76.3 1.1E+02 0.0025 34.8 17.1 79 526-614 332-424 (468)
190 PRK10964 ADP-heptose:LPS hepto 75.5 23 0.00049 38.0 10.9 98 457-580 179-278 (322)
191 COG1703 ArgK Putative periplas 74.9 57 0.0012 34.9 12.9 112 188-325 63-176 (323)
192 PRK10916 ADP-heptose:LPS hepto 74.6 32 0.00069 37.3 11.8 100 457-580 181-286 (348)
193 KOG4626 O-linked N-acetylgluco 70.2 69 0.0015 37.4 12.9 190 448-665 752-949 (966)
194 PF08660 Alg14: Oligosaccharid 69.8 14 0.0003 36.2 6.8 64 290-372 90-159 (170)
195 PRK02122 glucosamine-6-phospha 68.6 12 0.00027 44.4 7.2 44 160-226 366-409 (652)
196 PF01975 SurE: Survival protei 68.4 32 0.0007 34.4 9.2 39 164-228 1-39 (196)
197 PF06925 MGDG_synth: Monogalac 67.5 22 0.00047 34.4 7.7 60 290-372 87-150 (169)
198 KOG1192 UDP-glucuronosyl and U 66.5 1.2E+02 0.0027 34.3 14.8 142 457-631 278-433 (496)
199 PF03033 Glyco_transf_28: Glyc 66.5 4.7 0.0001 37.1 2.7 28 186-225 8-35 (139)
200 PF04413 Glycos_transf_N: 3-De 64.9 37 0.0008 33.6 8.8 68 292-372 95-162 (186)
201 PRK05562 precorrin-2 dehydroge 64.1 1.8E+02 0.0038 29.8 15.2 139 473-638 35-180 (223)
202 PF03016 Exostosin: Exostosin 60.7 20 0.00043 37.7 6.5 70 540-610 227-299 (302)
203 PF05686 Glyco_transf_90: Glyc 57.9 27 0.00058 39.0 7.1 62 590-655 256-318 (395)
204 COG2910 Putative NADH-flavin r 55.1 10 0.00022 37.5 2.8 33 164-225 1-33 (211)
205 smart00672 CAP10 Putative lipo 54.0 69 0.0015 33.5 9.0 48 605-656 203-250 (256)
206 PRK04020 rps2P 30S ribosomal p 53.3 76 0.0016 32.0 8.7 113 467-602 47-161 (204)
207 COG1618 Predicted nucleotide k 53.0 2.3E+02 0.005 27.7 12.6 44 159-226 1-44 (179)
208 COG1647 Esterase/lipase [Gener 52.3 57 0.0012 33.3 7.6 44 278-323 72-115 (243)
209 KOG1021 Acetylglucosaminyltran 50.5 1.3E+02 0.0027 34.4 11.1 96 542-643 336-434 (464)
210 PF15024 Glyco_transf_18: Glyc 49.7 1.7E+02 0.0037 34.0 11.7 157 456-657 276-458 (559)
211 PRK06988 putative formyltransf 47.5 91 0.002 33.5 8.9 18 204-224 17-34 (312)
212 TIGR00715 precor6x_red precorr 47.1 58 0.0013 34.0 7.1 83 518-612 166-253 (256)
213 KOG0832 Mitochondrial/chloropl 45.8 2.7E+02 0.0058 28.6 11.0 112 457-602 108-220 (251)
214 PLN02534 UDP-glycosyltransfera 45.1 5.3E+02 0.012 29.6 17.0 77 526-614 344-442 (491)
215 KOG0780 Signal recognition par 45.0 4.1E+02 0.0089 29.7 13.0 174 461-654 158-342 (483)
216 PRK13932 stationary phase surv 43.1 3.6E+02 0.0077 28.3 12.1 35 289-323 88-133 (257)
217 TIGR00087 surE 5'/3'-nucleotid 42.0 3.7E+02 0.008 27.9 12.0 36 289-324 83-129 (244)
218 PF09752 DUF2048: Uncharacteri 41.8 3.7E+02 0.008 29.5 12.3 34 291-324 173-206 (348)
219 PF03308 ArgK: ArgK protein; 41.5 2.7E+02 0.0058 29.3 10.8 109 187-323 40-152 (266)
220 PRK00676 hemA glutamyl-tRNA re 41.3 5.1E+02 0.011 28.3 14.2 125 487-635 173-305 (338)
221 KOG3909 Queuine-tRNA ribosyltr 40.1 1.8E+02 0.0039 31.5 9.3 90 516-610 202-299 (414)
222 TIGR01012 Sa_S2_E_A ribosomal 39.9 1E+02 0.0022 30.9 7.2 113 467-602 41-155 (196)
223 TIGR01470 cysG_Nterm siroheme 39.1 4.1E+02 0.0089 26.6 15.6 170 477-674 23-201 (205)
224 PRK10840 transcriptional regul 38.1 4E+02 0.0086 26.2 12.2 109 489-614 4-124 (216)
225 PF13407 Peripla_BP_4: Peripla 37.2 4E+02 0.0087 26.6 11.6 75 509-583 14-89 (257)
226 COG2236 Predicted phosphoribos 36.5 65 0.0014 32.2 5.2 46 271-317 9-54 (192)
227 COG4195 Phage-related replicat 36.0 47 0.001 32.8 3.9 69 131-216 8-80 (208)
228 cd03146 GAT1_Peptidase_E Type 35.5 4.2E+02 0.0091 26.5 11.2 109 460-584 3-124 (212)
229 COG1519 KdtA 3-deoxy-D-manno-o 35.5 2.6E+02 0.0056 31.3 10.1 104 456-581 49-153 (419)
230 COG3171 Uncharacterized protei 34.7 34 0.00075 30.8 2.6 32 117-148 25-60 (119)
231 PTZ00254 40S ribosomal protein 34.6 1.3E+02 0.0027 31.4 7.1 113 467-602 50-165 (249)
232 PF05728 UPF0227: Uncharacteri 34.3 3.4E+02 0.0074 26.8 10.0 30 295-324 61-90 (187)
233 PF10649 DUF2478: Protein of u 33.6 78 0.0017 30.6 5.1 40 541-580 84-129 (159)
234 PRK13398 3-deoxy-7-phosphohept 33.2 4.9E+02 0.011 27.3 11.5 111 460-582 28-142 (266)
235 PRK04531 acetylglutamate kinas 33.2 1.2E+02 0.0026 33.8 7.3 56 455-527 35-91 (398)
236 PRK03359 putative electron tra 33.1 1.3E+02 0.0028 31.4 7.1 33 292-324 112-148 (256)
237 PF04230 PS_pyruv_trans: Polys 31.8 4.6E+02 0.01 26.0 11.1 39 537-581 245-283 (286)
238 cd01020 TroA_b Metal binding p 31.7 3E+02 0.0064 28.6 9.6 129 543-682 46-175 (264)
239 KOG2452 Formyltetrahydrofolate 30.8 52 0.0011 36.7 3.7 38 164-232 1-38 (881)
240 TIGR03642 cas_csx13 CRISPR-ass 30.5 1.6E+02 0.0036 27.2 6.5 100 203-315 9-116 (124)
241 TIGR00732 dprA DNA protecting 29.9 4.4E+02 0.0095 26.8 10.2 125 469-608 82-218 (220)
242 PRK12342 hypothetical protein; 29.8 1.3E+02 0.0029 31.3 6.5 34 292-325 109-146 (254)
243 PLN02670 transferase, transfer 29.7 4.1E+02 0.0088 30.4 10.9 114 188-320 18-136 (472)
244 PLN00016 RNA-binding protein; 29.6 43 0.00093 36.7 3.0 20 203-226 71-90 (378)
245 COG0569 TrkA K+ transport syst 28.8 1.7E+02 0.0037 29.8 7.0 33 291-323 65-101 (225)
246 PRK10360 DNA-binding transcrip 27.6 5.2E+02 0.011 24.3 11.3 75 541-615 37-117 (196)
247 TIGR01283 nifE nitrogenase mol 27.5 5.6E+02 0.012 29.0 11.6 94 469-579 168-273 (456)
248 PLN02562 UDP-glycosyltransfera 27.4 3.8E+02 0.0082 30.4 10.2 27 188-226 18-44 (448)
249 TIGR02853 spore_dpaA dipicolin 27.0 3.9E+02 0.0086 28.3 9.7 103 203-321 15-119 (287)
250 TIGR02990 ectoine_eutA ectoine 26.9 1.9E+02 0.0042 29.8 7.1 34 290-323 179-214 (239)
251 PRK13288 pyrophosphatase PpaX; 26.3 4.6E+02 0.01 25.8 9.7 120 468-610 83-210 (214)
252 PRK08057 cobalt-precorrin-6x r 26.2 3.1E+02 0.0067 28.5 8.5 33 291-323 64-100 (248)
253 COG4088 Predicted nucleotide k 26.2 2.3E+02 0.0049 29.0 6.9 49 273-323 56-108 (261)
254 PRK11519 tyrosine kinase; Prov 26.0 1.2E+03 0.026 28.2 14.6 42 282-323 625-668 (719)
255 COG1618 Predicted nucleotide k 25.2 2.1E+02 0.0046 28.0 6.3 71 542-614 93-175 (179)
256 KOG4552 Vitamin-D-receptor int 25.1 73 0.0016 31.8 3.3 22 83-104 85-106 (272)
257 PLN02327 CTP synthase 25.0 6.6E+02 0.014 29.4 11.4 108 471-585 280-402 (557)
258 PLN02770 haloacid dehalogenase 24.6 7.6E+02 0.016 25.1 11.5 111 469-599 110-226 (248)
259 PF03668 ATP_bind_2: P-loop AT 24.6 2.5E+02 0.0054 29.9 7.4 31 186-225 250-280 (284)
260 COG2204 AtoC Response regulato 24.5 9.6E+02 0.021 27.4 12.5 108 489-615 5-121 (464)
261 PRK13934 stationary phase surv 24.2 8.3E+02 0.018 25.7 11.1 34 290-323 82-127 (266)
262 TIGR03446 mycothiol_Mca mycoth 24.1 1.3E+02 0.0027 32.0 5.2 23 276-301 108-130 (283)
263 COG0482 TrmU Predicted tRNA(5- 23.8 1.4E+02 0.003 32.8 5.4 106 186-325 11-126 (356)
264 PRK13935 stationary phase surv 23.4 8.6E+02 0.019 25.4 11.8 35 289-323 83-128 (253)
265 PLN02657 3,8-divinyl protochlo 23.4 58 0.0012 36.1 2.6 52 146-226 43-94 (390)
266 CHL00194 ycf39 Ycf39; Provisio 23.0 58 0.0013 34.6 2.5 33 164-225 1-33 (317)
267 PF04392 ABC_sub_bind: ABC tra 22.8 6.2E+02 0.013 26.5 10.3 85 509-600 146-234 (294)
268 PRK05380 pyrG CTP synthetase; 22.7 7.6E+02 0.017 28.7 11.3 108 471-585 271-383 (533)
269 PRK13478 phosphonoacetaldehyde 22.6 6.6E+02 0.014 25.8 10.3 98 468-585 102-207 (267)
270 TIGR01278 DPOR_BchB light-inde 22.5 1.2E+03 0.026 26.8 13.5 61 512-580 177-239 (511)
271 PRK13225 phosphoglycolate phos 22.4 6.9E+02 0.015 26.2 10.4 126 467-614 142-271 (273)
272 COG0552 FtsY Signal recognitio 22.4 5.6E+02 0.012 27.9 9.6 65 131-216 106-171 (340)
273 PRK08229 2-dehydropantoate 2-r 22.3 66 0.0014 34.6 2.8 19 203-225 16-34 (341)
274 PRK06732 phosphopantothenate-- 22.3 1.1E+02 0.0023 31.4 4.1 30 181-225 20-49 (229)
275 COG0803 LraI ABC-type metal io 22.2 2E+02 0.0043 30.7 6.4 91 541-635 74-172 (303)
276 PLN02764 glycosyltransferase f 22.1 6.5E+02 0.014 28.7 10.7 27 188-226 17-43 (453)
277 PRK15408 autoinducer 2-binding 21.7 9.2E+02 0.02 25.9 11.5 72 511-584 41-115 (336)
278 PRK13933 stationary phase surv 21.6 9.3E+02 0.02 25.1 11.7 35 289-323 84-129 (253)
279 PF06303 MatP: Organiser of ma 21.5 90 0.0019 29.5 3.0 66 601-671 49-114 (148)
280 cd00762 NAD_bind_malic_enz NAD 21.2 5.5E+02 0.012 26.9 9.0 36 543-579 98-138 (254)
281 PF03358 FMN_red: NADPH-depend 21.2 1.2E+02 0.0026 28.3 4.0 35 164-216 1-35 (152)
282 COG2120 Uncharacterized protei 21.0 2E+02 0.0043 29.6 5.8 33 163-216 10-42 (237)
283 COG0496 SurE Predicted acid ph 21.0 7.8E+02 0.017 25.7 10.0 35 291-325 82-127 (252)
284 TIGR03481 HpnM hopanoid biosyn 20.9 4.2E+02 0.0091 26.4 8.0 46 627-677 52-101 (198)
285 cd05564 PTS_IIB_chitobiose_lic 20.9 3.4E+02 0.0075 23.5 6.5 74 491-581 3-78 (96)
286 COG4007 Predicted dehydrogenas 20.7 4E+02 0.0087 28.0 7.7 14 203-216 35-48 (340)
287 cd03129 GAT1_Peptidase_E_like 20.6 8.4E+02 0.018 24.2 11.2 109 464-585 7-125 (210)
288 PRK12560 adenine phosphoribosy 20.5 2.9E+02 0.0062 27.3 6.6 31 290-320 49-79 (187)
289 PRK05647 purN phosphoribosylgl 20.5 4.3E+02 0.0092 26.4 7.9 38 291-330 79-116 (200)
290 PF03959 FSH1: Serine hydrolas 20.4 1.8E+02 0.0038 29.2 5.2 37 164-216 3-39 (212)
291 PF06258 Mito_fiss_Elm1: Mitoc 20.3 1.1E+03 0.023 25.3 13.2 138 455-601 111-258 (311)
292 COG3340 PepE Peptidase E [Amin 20.1 9.4E+02 0.02 24.6 11.7 100 473-585 18-129 (224)
293 PF02585 PIG-L: GlcNAc-PI de-N 20.0 1.1E+02 0.0025 27.6 3.5 26 275-303 86-111 (128)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=2.2e-160 Score=1376.20 Aligned_cols=696 Identities=82% Similarity=1.304 Sum_probs=673.9
Q ss_pred CCCCCCCCccchhhhhHHHHhhcHHHHHHHHHHHHhcCccccchhchHHHHhhhcCCccccccccCCchHHHHHHhh---
Q 005444 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ--- 77 (696)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 77 (696)
|++++|+|++||+|||+++|++|||+|++|||||+++||++||+|||++|||++++++.+++|+.+|+||++|++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 005444 78 -------------------------------------------------------------------------------- 77 (696)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (696)
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence
Q ss_pred --------------------------------hhhhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcc
Q 005444 78 --------------------------------LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 125 (696)
Q Consensus 78 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (696)
+|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 899999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHH
Q 005444 126 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 205 (696)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~ 205 (696)
||||||+||+|||++|+|+|++|||++||+|++||||+|||+|||+||||+|.+++|.||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHH
Q 005444 206 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 285 (696)
Q Consensus 206 ~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i 285 (696)
++|+++||+|+|+|+|+||.+++..+++|+++.|.+.++++++|+|+||++.++++++|++|+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEe
Q 005444 286 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 365 (696)
Q Consensus 286 ~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt 365 (696)
.+..+++||+||+|||+++++|.++++++|+|+|+|+|++++.|+..++.+|+..+..|+|++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77767899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 366 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 366 ~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
+|.++++++++.++||++|.+|+||++|++++|++++++|++|||||+|...|+|+.....+.+.+++++++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888889999999999999999
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
++++|++.++++++|+++||+++.||++.|++|++++.+++++++|+|||++.++..+.+.++.++.++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999888888999999999999999999999999998777889999999986556667788888889999999999999
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 605 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~ 605 (696)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++|||+||+|||||+.||+.|+|.+|.+|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhcccccc
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLV 685 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (696)
+|++|.+++++|..||+.|++|+++|++++.++|||+.++++++++..+||||+++++++|+|++|||||||+||||+||
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 801 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELA 801 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHh
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCC
Q 005444 686 KSVPLASENQH 696 (696)
Q Consensus 686 ~~~~~~~~~~~ 696 (696)
++||+++|+++
T Consensus 802 ~~~~~~~~~~~ 812 (815)
T PLN00142 802 KTVPLAVDDPQ 812 (815)
T ss_pred hcCCcccccCC
Confidence 99999999764
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=4.9e-151 Score=1299.34 Aligned_cols=668 Identities=75% Similarity=1.235 Sum_probs=646.8
Q ss_pred HHHHHHHHHHHHhcCccccchhchHHHHhhhcCCccccccccCCchHHHHHHhh--------------------------
Q 005444 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ-------------------------- 77 (696)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 77 (696)
||+|++|||||+++||++||+|||++||+++++++.+++++.+|+||++|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 799999999999999999999999999999997777889999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 005444 78 -------------------------------------------------------------------------------- 77 (696)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (696)
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence
Q ss_pred ---------hhhhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCC
Q 005444 78 ---------LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 148 (696)
Q Consensus 78 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 148 (696)
+|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCC
Q 005444 149 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 228 (696)
Q Consensus 149 ~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~ 228 (696)
||++||+|++||||+|||++||+||+++|.+++|.||||||++||++||||||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccceeeecCCCceEEEEecccCccc-ccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHH
Q 005444 229 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 307 (696)
Q Consensus 229 ~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~-~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a 307 (696)
..++.|+++.+.+.++++++|+|+||++..+ ++++|++++++|||+..|+.++.+.+..+.+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 8899999999999999999999999999877 789999999999999999999999998777789999999999999999
Q ss_pred HHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccc
Q 005444 308 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 387 (696)
Q Consensus 308 ~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~ 387 (696)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred cccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEcccc
Q 005444 388 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 467 (696)
Q Consensus 388 ~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 467 (696)
|||++|++++|++++++|++|||||+|.+.|+|+.....+....++.+++++|++.++++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888999999999999999999998889999999999999
Q ss_pred ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHH
Q 005444 468 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 547 (696)
Q Consensus 468 ~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~l 547 (696)
+.||++.|++|+++++.+.++++|+|+|++.++..+.|.++.++.++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877777899999999887677888999999999999999999999999999877677788999998
Q ss_pred HccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 548 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 548 a~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
++++|+||+||++|+||++++|||+||+|||||+.||+.|+|.++.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhcccccccccccc
Q 005444 628 SDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 691 (696)
Q Consensus 628 ~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (696)
+++|++++.++|||+.++++++++..+||||+++++++|++++|||||||+|||||||++||++
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=2.2e-125 Score=1009.30 Aligned_cols=435 Identities=75% Similarity=1.188 Sum_probs=370.7
Q ss_pred CCccchhhhhHHHHhhcHHHHHHHHHHHHhcCccccchhchHHHHhhhcCCccccccccCCchHHHHHHhh---------
Q 005444 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQ--------- 77 (696)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 77 (696)
||++||||||+|+|++|||+|++|||||+++||++||+|||++||+++++++.++.+..+|+||++|++||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999997777778888899999999999
Q ss_pred --------------------------------------------------------------------------------
Q 005444 78 -------------------------------------------------------------------------------- 77 (696)
Q Consensus 78 -------------------------------------------------------------------------------- 77 (696)
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence
Q ss_pred --------------------------hhhhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcH
Q 005444 78 --------------------------LLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 131 (696)
Q Consensus 78 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (696)
+|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHc
Q 005444 132 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 211 (696)
Q Consensus 132 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~ 211 (696)
+||+|||++|+|+|+||||++||+|++||||+|+||++||||||+|+||+|+||||||++||+|||||||++|..+++.+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCC
Q 005444 212 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 291 (696)
Q Consensus 212 G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~ 291 (696)
|.+|.|+|+|+||.+|++.|++|+++.+++.+++|++|+|+||++.+|++++|+||+++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
+||+||+||+++|++|+++++++|+|+|+|+|+++++||+.++++|+.++.+|||+|+|+||.++|+.||+|||||+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 441 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 441 (696)
+++++.+|||+||.+||||++|++++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974
No 4
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.4e-61 Score=527.07 Aligned_cols=491 Identities=42% Similarity=0.640 Sum_probs=433.9
Q ss_pred hhccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcC
Q 005444 80 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 159 (696)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 159 (696)
|.||++++...+|+++.+|+..++.. .+||+..|.+.+++.++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999988
Q ss_pred CCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCcccccee
Q 005444 160 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 239 (696)
Q Consensus 160 ~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e 239 (696)
++. ++|.||+||+++|+++++++|+.++..+..+.+.+++++|++++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999998765 3455
Q ss_pred eecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEE
Q 005444 240 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 319 (696)
Q Consensus 240 ~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v 319 (696)
...++.+++|+++|+ ++..+|+ +.+||++..|+ .+...+.+.+.+ ||++|.|+++++..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~----~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPF----GILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEecc----chhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 556667899999999 3455677 88999999988 556667676677 999999999999999999999999999
Q ss_pred EEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccc-cceeecc
Q 005444 320 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 398 (696)
Q Consensus 320 ~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~-l~~~~~g 398 (696)
++.|.++..++..++..|+.+...|+++++|.++...++++| +++++++++++....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999 9999999
Q ss_pred cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHH
Q 005444 399 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 478 (696)
Q Consensus 399 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea 478 (696)
++++.++++.+++|-|.+.+.|.-. .+++.+.+
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~i~~----------------------------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDSIPE----------------------------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcccCC-----------------------------------------
Confidence 9999999999999999988877211 11111000
Q ss_pred HHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC
Q 005444 479 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558 (696)
Q Consensus 479 ~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 558 (696)
...++.+++++|+. ..+++++|+.++.++|+++++++++.++++|.-. ..+..+.|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~--G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR--GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCC--CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 12245667776632 1457899999999999999999999655555532 3334566999999888899999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHH---HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 559 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD---QAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 559 ~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e---~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
. |.||++++|||+||+|||||+.||+.|+|.++.+||+++| +.+ .+|++| .+|..||++|.+|+++|+++|
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRV 448 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 444 355555 566699999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhccc
Q 005444 636 YERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 682 (696)
Q Consensus 636 ~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (696)
++.|||+++.+++.++...|.+|+.++..++...+||++|||.|+|+
T Consensus 449 ~e~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 449 KEMFSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HHHHhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999986
No 5
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.6e-59 Score=550.04 Aligned_cols=456 Identities=25% Similarity=0.456 Sum_probs=353.5
Q ss_pred eeEEEEEccccccCCccc-CC-CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--CCccceeEEEeCCCCCC-CCCccccc
Q 005444 163 VFNVVILSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQR 237 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~-lG-~p~tGG~~vyv~~~~raL~~~L~~~L~~~G--~eV~~~ilV~T~~~~~~-~g~~~~~~ 237 (696)
-|+|++||+||.|+.+++ +| .+|||||++||+ +|+++|+++| |+|+ |+||.+.++ .+..|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 588999999999998886 88 599999999999 5555568888 7888 999998653 34446655
Q ss_pred eeee------------cCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHH-------h----CCCCe
Q 005444 238 LERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFPD 294 (696)
Q Consensus 238 ~e~i------------~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~-------~----~~~pD 294 (696)
.|.+ ...+|++|+|+|+++.. +++++..+|||+..|+..+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5333 34468999999999863 26889999999999999988876531 1 12499
Q ss_pred EEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCC----CCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 295 FIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 295 vIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~----~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
|||+|||+++.++.++++.+++|+|+|.|+++..++. .+...+...+..|++..++.+|..++..||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999877653 223345566777888999999999999999999999999
Q ss_pred Hhhccccccccccccccccccccee-----ecc---cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRV-----VHG---IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 442 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~-----~~g---i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~ 442 (696)
++ +||..|..|. |.++++ ..| .+.+.+++.|||||+|.+.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 87 3455444444 555444 223 33457799999999999999986432211000 000000000
Q ss_pred ccc-c-cccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC--CeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 443 EQN-D-EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 443 ~~~-~-~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~--~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
... . +....+.++++++|+++||+++.||++.|++||+.+++..+ ++. +|+|++++ ..........+...+.++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd-~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD-IDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch-hhhhhccchHHHHHHHHH
Confidence 000 0 00112237889999999999999999999999999875433 444 46676643 111111123446778899
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHcc---ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeE
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADT---KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASG 595 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~a---advfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G 595 (696)
++++++.++|.|+| .++.+++..+|+.+ +|+||+||++|+||++++||||||+|||||+.||+.|+|.++.+|
T Consensus 541 i~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nG 616 (1050)
T TIGR02468 541 IDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNG 616 (1050)
T ss_pred HHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcE
Confidence 99999999999999 66678888888742 279999999999999999999999999999999999999999999
Q ss_pred EEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 596 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 596 ~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
++++|.|++++|++|.+++ .|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 617 lLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 617 LLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred EEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 9999999999999997766 89999999999999998 5799999999999988754
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.1e-52 Score=467.52 Aligned_cols=426 Identities=29% Similarity=0.546 Sum_probs=316.9
Q ss_pred eEEEEEccccccCCcc-cCCC-CCCCchhHHHHHHHHHHHHHHHHHHHHcCC--CccceeEEEeCCCCCCC-CCccccce
Q 005444 164 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 238 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~-~lG~-p~tGG~~vyv~~~~raL~~~L~~~L~~~G~--eV~~~ilV~T~~~~~~~-g~~~~~~~ 238 (696)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.++... ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999988 6775 99999999999 66667799997 899 9998765421 12232233
Q ss_pred eeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcE
Q 005444 239 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 318 (696)
Q Consensus 239 e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~ 318 (696)
+.+ .+++.|+|+|+.+. .|.+....++++..|...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 222 24799999998653 24555667888888777777666432 34799999999888899999999999999
Q ss_pred EEEecCCCccCCC---CCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhccccccccccccccccccccee
Q 005444 319 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 395 (696)
Q Consensus 319 v~t~H~l~~~~~~---~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~ 395 (696)
|+|.|+....+.. .....+..+...|.+......+..+++.+|.||++|.+++.. + +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432211 111122222333444444445778999999999999765431 0 111
Q ss_pred ecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHH
Q 005444 396 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 475 (696)
Q Consensus 396 ~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L 475 (696)
..+++ +.|+.+||||+|.+.|.|......... +.+ ....++. ++++++|+|+||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~-----~~~-------~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSE-----IDN-------LLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchh-----HHH-------HHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11232 679999999999999887532211000 000 0011222 5667899999999999999999
Q ss_pred HHHHHHhhccCCCeEEE-EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcc---c
Q 005444 476 VECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT---K 551 (696)
Q Consensus 476 lea~~~l~~~~~~~~Lv-IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a---a 551 (696)
++|++++....+..+++ |+|+|++ ......+..++.+++..+++++++.++|+|+| .++.+++..+|+.+ +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~ 341 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSR 341 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcC
Confidence 99998754333334554 5576654 12222222344566788899999999999999 66678899888842 2
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q 005444 552 GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 631 (696)
Q Consensus 552 dvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a 631 (696)
|+||+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|++++|+|+++++++|.+++ +||+.+++|+++|
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a 417 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNG 417 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999997776 8999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHH
Q 005444 632 LKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 632 ~~~v~~~ysw~~~a~~l~~ly 652 (696)
++++.++|||+.++++|++++
T Consensus 418 ~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 418 IEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999875
No 7
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=5.1e-45 Score=410.88 Aligned_cols=427 Identities=18% Similarity=0.209 Sum_probs=290.6
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc-cceeee-
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV- 241 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~-~~~e~i- 241 (696)
|||++||.+.+|. ..+||+..+|. .|+++|+++||+|. |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999999864 45899999999 66667799999999 999886543211000 000000
Q ss_pred --------cCCCceEEEEecccCcccccccccccCCCcccH---HH---HHHHHHHHHHHHhCCCCeEEEEeCCCchHHH
Q 005444 242 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ET---FTEDVGSEITAELQGFPDFIIGNYSDGNLVA 307 (696)
Q Consensus 242 --------~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l---~~---f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a 307 (696)
...+++++++++... +..+..++.+. .+ |...+...+ .....+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~-------~~~~~~~y~~~d~~~r~~~f~~~~~~~~-~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPH-------LFDRPSGYGYPDNGERFAFFSWAAAEFA-EGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHH-------HcCCCCCCCCcChHHHHHHHHHHHHHHH-HhcCCCCceEEECCcHHHHHH
Confidence 112467777776522 12233344332 22 333333333 334679999999999999998
Q ss_pred HHHhhcC-----CCcEEEEecCCCccCCCC------CCccHhhh-hhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcc
Q 005444 308 SLLAYKM-----GITQCTIAHALEKTKYPD------SDIYWKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 375 (696)
Q Consensus 308 ~lla~~~-----gip~v~t~H~l~~~~~~~------s~~~~~~~-~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 375 (696)
.++++.+ ++|+|+|+|++....... ..+.+..+ .....+...+...+.+++.||.|+|+|+..++...
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888653 799999999985432110 00011000 00111111223345678999999999998765433
Q ss_pred cccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCC
Q 005444 376 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDR 455 (696)
Q Consensus 376 ~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~ 455 (696)
.. + .++.+.+. ++....|+.+||||+|.+.|.|..+.......-...++.+...+...++.+|+. ++
T Consensus 214 ~~---~---~~~gl~~~------~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 214 TP---E---FGYGLEGL------LRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred cc---c---CCcChHHH------HHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 21 0 00111110 112256899999999999998864321000000000111111223345567873 34
Q ss_pred CCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-eccc
Q 005444 456 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAAQ 534 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f-lG~~ 534 (696)
+.++|+++||+.++||++.|++|++++.+. +++|+|+|+|.. .+.+.+++++++++ +++.+ .|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~- 345 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY- 345 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC-
Confidence 789999999999999999999999998753 799999998854 23567888888886 35654 552
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC------CeEEEECCCCHHHHHH
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAAE 608 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg------~~G~l~~p~d~e~la~ 608 (696)
+.+.+..+++ ++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++++|++++++
T Consensus 346 ----~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 346 ----DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLR 420 (466)
T ss_pred ----CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHH
Confidence 3344556777 5999999999999999999999999999999999999999888 8999999999999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+|.+++. +..|++.+.+|++++++ ++|||+.++++|+++|+.
T Consensus 421 ~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 421 ALRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 9988763 33578889999988863 789999999999999873
No 8
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.7e-43 Score=409.52 Aligned_cols=458 Identities=15% Similarity=0.169 Sum_probs=313.8
Q ss_pred HHHhhcCCCcchHHHHhc--CC--CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 005444 141 LLDILQAPDPSTLEKFLG--RL--PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 216 (696)
Q Consensus 141 ~~~~~~~p~~~~~~~~~~--~~--p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~ 216 (696)
-.++.+.+|...+..|+. +- .+.|||++||....|- ..+||...++. .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 345667888777777764 22 2459999999998864 57999999999 66666799999999
Q ss_pred ceeEEEeCCCCCCCCCccc-c-----cee-eecC-----------CCceEEEEecccCcccccccccccCCCccc---HH
Q 005444 217 PKILIVTRLIPDAKGTTCN-Q-----RLE-RVSG-----------TEHTHILRVPFRSEKGILRQWISRFDVWPY---LE 275 (696)
Q Consensus 217 ~~ilV~T~~~~~~~g~~~~-~-----~~e-~i~~-----------~~~v~I~rvp~~~~~~~~~~wisr~~i~p~---l~ 275 (696)
|+++.++........ . ... .+.+ .+|+.++.+...... .+..|..++.+ ..
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643210000 0 000 0000 023333333210000 01223344422 22
Q ss_pred H---HHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhh------cCCCcEEEEecCCCccCC-CCC-----CccHhhh
Q 005444 276 T---FTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY------KMGITQCTIAHALEKTKY-PDS-----DIYWKKF 340 (696)
Q Consensus 276 ~---f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~------~~gip~v~t~H~l~~~~~-~~s-----~~~~~~~ 340 (696)
+ |...++..+ .....+|||||||+|.+++++.++.. ..++|.|+|+|++..... +.. ++.+..+
T Consensus 592 RF~~FsrAaLe~~-~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 592 RFSYFSRAALELL-YQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHH-HhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 2 333333333 33467999999999999987554443 235789999999864432 111 1111111
Q ss_pred h--hhh--hccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCC
Q 005444 341 D--EKY--HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMD 416 (696)
Q Consensus 341 ~--~~y--~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~ 416 (696)
. ... .+..++..-+..+..||.|+|+|+..+.+.... + +..|.+. +.....|+.+|+||||.+
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTD 737 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehh
Confidence 0 000 111222223345667999999999987654321 1 1112111 233467999999999999
Q ss_pred CCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCC-CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEe
Q 005444 417 IYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 495 (696)
Q Consensus 417 ~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG 495 (696)
.|.|..+..-....-...++.+..++...++++|+..+ ++.|+|+++||+.++||++.+++|+..+.+ ++++|+|+|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvG 815 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLG 815 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEe
Confidence 99987542110000011233444455566778898432 467999999999999999999999988764 479999999
Q ss_pred CccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC
Q 005444 496 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL 575 (696)
Q Consensus 496 ~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl 575 (696)
+|+++ .+.+.++.+++++++.++|.|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+
T Consensus 816 dGp~~---------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGt 881 (977)
T PLN02939 816 SSPVP---------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGS 881 (977)
T ss_pred CCCcH---------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCC
Confidence 99751 23567889999999999999999 555556677888 59999999999999999999999999
Q ss_pred cEEEcCCCCcchhhcc---------CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 005444 576 PTFATCHGGPAEIIEH---------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 576 PVvat~~gG~~EiI~d---------g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~ 646 (696)
|+|++++||+.|+|.+ +.+||+|++.|+++++++|.+++..+..||+.|++|+++++ .++|||+.+++
T Consensus 882 PPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~ 958 (977)
T PLN02939 882 VPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSAS 958 (977)
T ss_pred CEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHH
Confidence 9999999999999975 57999999999999999999988666679999999998765 37899999999
Q ss_pred HHHHHHHH
Q 005444 647 RLMTLAGV 654 (696)
Q Consensus 647 ~l~~ly~~ 654 (696)
+|+++|+.
T Consensus 959 qYeeLY~~ 966 (977)
T PLN02939 959 QYEELYQR 966 (977)
T ss_pred HHHHHHHH
Confidence 99999874
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.1e-43 Score=392.00 Aligned_cols=399 Identities=22% Similarity=0.318 Sum_probs=295.4
Q ss_pred EEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCC
Q 005444 166 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 245 (696)
Q Consensus 166 I~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~ 245 (696)
|++++.|..|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+. .....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 578889988643 345566799999999 77777899999999 998764322111 111123
Q ss_pred ceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCC
Q 005444 246 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 325 (696)
Q Consensus 246 ~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l 325 (696)
++++.+++..+..+ .....+..++..|.....+.+......+||+||+|++.+++.+.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654322 1111111122233333443333333468999999998888888888888999999999986
Q ss_pred CccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCc
Q 005444 326 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 405 (696)
Q Consensus 326 ~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k 405 (696)
...+.. ++...... ........+...++.+|.|+++|+...+...+. .+ ....+
T Consensus 135 ~~~~~~----~~~~~~~~-~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~--~~~~k 188 (405)
T TIGR03449 135 AAVKNA----ALADGDTP-EPEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YD--ADPDR 188 (405)
T ss_pred HHHHHH----hccCCCCC-chHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cC--CChhh
Confidence 432100 00000000 000111234567899999999998765421111 12 22578
Q ss_pred EEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhcc
Q 005444 406 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 485 (696)
Q Consensus 406 ~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~ 485 (696)
+.+||||+|.+.|.|...... +.++++ ++++++|+|+||+.+.||++.+++|+.++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATE-------------------RARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHH-------------------HHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 999999999988876532221 123555 56788999999999999999999999998776
Q ss_pred CCC--eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 486 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 486 ~~~--~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
.++ ++|+|+|++... ...+.+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999974320 0112567888999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHH
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 643 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~ 643 (696)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999998776 79999999999999987 7899999
Q ss_pred HHHHHHHHHHH
Q 005444 644 YSERLMTLAGV 654 (696)
Q Consensus 644 ~a~~l~~ly~~ 654 (696)
++++++++|..
T Consensus 391 ~~~~~~~~y~~ 401 (405)
T TIGR03449 391 TADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.6e-43 Score=399.60 Aligned_cols=430 Identities=18% Similarity=0.227 Sum_probs=295.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc-----cce
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-----QRL 238 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~-----~~~ 238 (696)
|||++||.+.+|- -.+||+..++. .|+++|+++||+|. |+|+.++........ ...
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998863 35899999999 66666799999999 999887643211000 000
Q ss_pred e--------e----ecCCCceEEEEecccCccccccccccc-CCCcc--c---HH---HHHHHHHHHHHHHhCCCCeEEE
Q 005444 239 E--------R----VSGTEHTHILRVPFRSEKGILRQWISR-FDVWP--Y---LE---TFTEDVGSEITAELQGFPDFII 297 (696)
Q Consensus 239 e--------~----i~~~~~v~I~rvp~~~~~~~~~~wisr-~~i~p--~---l~---~f~~~~~~~i~~~~~~~pDvIh 297 (696)
. . ....+++.++++..... ..| ..++. + .. .|...+...+.. ...+|||||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~-------~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH 133 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL-------FDRPGGIYGDDYPDNAERFAFFSRAAAELLSG-LGWQPDVVH 133 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH-------cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEE
Confidence 0 0 01113466666543210 111 11221 1 22 344444444433 467999999
Q ss_pred EeCCCchHHHHHHhhcCC---CcEEEEecCCCccCC-CCCCc-----cHhhhh-hhhhccchhhhhHHhhhcCCEEEecc
Q 005444 298 GNYSDGNLVASLLAYKMG---ITQCTIAHALEKTKY-PDSDI-----YWKKFD-EKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 298 ~h~~~~~l~a~lla~~~g---ip~v~t~H~l~~~~~-~~s~~-----~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
+|+|.+++++.+++...+ +|.|+|+|++..... +.... .+..+. ..+.+...+...+.++..||.|+|+|
T Consensus 134 ~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 134 AHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred ECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecC
Confidence 999999999998888776 999999999864321 11100 000000 01111112334566899999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
+..++.+.... | ++.+.+. +.....++.+|+||+|.+.|.|..+......--...++.....+...++
T Consensus 214 ~~~~~ei~~~~--~----~~~l~~~------l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 281 (473)
T TIGR02095 214 PTYAREILTPE--F----GYGLDGV------LKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQE 281 (473)
T ss_pred HhHHHHhcCCc--C----CccchhH------HHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHH
Confidence 98765433210 0 0111111 1112569999999999999988643210000000001111112233456
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
++|+..++++++|+++||+.++||++.+++|+.++.+. +++|+|+|+|.. .+.+.+++++++++ ++
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~ 347 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GN 347 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--Cc
Confidence 68875445889999999999999999999999998753 599999999853 23467777777764 56
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC------CeEEEECCC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPY 601 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg------~~G~l~~p~ 601 (696)
+.+.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++++.
T Consensus 348 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 348 VRVII----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred EEEEE----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC
Confidence 88877 456667778888 5999999999999999999999999999999999999999988 899999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++++|.+++.....|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHHHHHHHHHHHh
Confidence 9999999999887544459999999999886 3689999999999999863
No 11
>PLN02316 synthase/transferase
Probab=100.00 E-value=8.7e-43 Score=410.58 Aligned_cols=406 Identities=15% Similarity=0.087 Sum_probs=282.3
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc-cce-ee
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRL-ER 240 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~-~~~-e~ 240 (696)
+|||++||.+..|- ..+||+..+|. .|+++|+++||+|. |+|+.++........ ... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999999864 35899999999 66666799999999 999987642100000 000 00
Q ss_pred e--c---------CCCceEEEEecccCcccccccccccCCCccc---HH---HHHHHHHHHHHHHhCCCCeEEEEeCCCc
Q 005444 241 V--S---------GTEHTHILRVPFRSEKGILRQWISRFDVWPY---LE---TFTEDVGSEITAELQGFPDFIIGNYSDG 303 (696)
Q Consensus 241 i--~---------~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~---l~---~f~~~~~~~i~~~~~~~pDvIh~h~~~~ 303 (696)
+ . ..+++.++.+.... + +..+..++.| .. .|...++..+. ....+|||||||+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~-~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLL-QSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCChH
Confidence 0 0 01234444443211 1 1222223322 22 33333443333 3367999999999999
Q ss_pred hHHHHHHhhc------CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccc
Q 005444 304 NLVASLLAYK------MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 377 (696)
Q Consensus 304 ~l~a~lla~~------~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 377 (696)
++++.+++.. .++|+|+|+|++.... . + -...+..||.|+|+|+..+..+..
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~--------n-------~------lk~~l~~AD~ViTVS~tya~EI~~- 778 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA--------N-------H------IGKAMAYADKATTVSPTYSREVSG- 778 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch--------h-------H------HHHHHHHCCEEEeCCHHHHHHHHh-
Confidence 9988888764 3589999999864211 0 0 123678999999999987653221
Q ss_pred cccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhh-cchhhhcCCccccccccCCCCCCC
Q 005444 378 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGTLSDRS 456 (696)
Q Consensus 378 v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~~~~~l~~~~~~~~~~g~l~~~~ 456 (696)
. ..+.....|+.+|+||||.+.|.|..+.......-. .-++.+...+...++.+|+. +++
T Consensus 779 --~----------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 779 --N----------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred --c----------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 0 112222469999999999999988643210000000 00001111222345568873 247
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEeccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAAQ 534 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L--~~~V~flG~~ 534 (696)
.|+|+++|||.++||++.|++|+..+.+ ++++|+|+|+|+++ .+.+.+.++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g~- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCLT- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEec-
Confidence 8999999999999999999999998865 47999999999761 235678888998865 578999873
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC-------------CeEEEECCC
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDPY 601 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg-------------~~G~l~~p~ 601 (696)
.+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.++ .+||+|++.
T Consensus 908 ---~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 908 ---YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred ---CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 32222346777 5999999999999999999999999999999999999999884 699999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++.+|.+++... ++....++..+++.+.+.|||+..+++|+++|+.
T Consensus 984 d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 984 DAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999998887422 3444556777777778899999999999999964
No 12
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=6.6e-43 Score=394.66 Aligned_cols=439 Identities=17% Similarity=0.170 Sum_probs=297.5
Q ss_pred CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCc--ccc--
Q 005444 161 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 236 (696)
Q Consensus 161 p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~--~~~-- 236 (696)
|| |||+++|....|- ..|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 66 9999999998864 57999999998 56666799999999 9998875432210 000
Q ss_pred ceeee--cCCCceEEEEec--ccCccc----cc--ccccccCCCc----------ccHHHHH---HHHHHHHHHHhCCCC
Q 005444 237 RLERV--SGTEHTHILRVP--FRSEKG----IL--RQWISRFDVW----------PYLETFT---EDVGSEITAELQGFP 293 (696)
Q Consensus 237 ~~e~i--~~~~~v~I~rvp--~~~~~~----~~--~~wisr~~i~----------p~l~~f~---~~~~~~i~~~~~~~p 293 (696)
....+ .-.....+.++- ..+..+ ++ ..+..|..++ ...++|+ ..+...+ .....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~-~~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETL-QRLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 00000 000011222210 000000 00 0112233332 1122332 2333333 3335699
Q ss_pred eEEEEeCCCchHHHHHHhhcC-------CCcEEEEecCCCccCCCCCCc-----cHhhhhhhhhccchhhhhHHhhhcCC
Q 005444 294 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDI-----YWKKFDEKYHFSCQFTADLIAMNNAD 361 (696)
Q Consensus 294 DvIh~h~~~~~l~a~lla~~~-------gip~v~t~H~l~~~~~~~s~~-----~~~~~~~~y~~~~~~~~e~~a~~~AD 361 (696)
||||+|+|.+++++.++++.. ++|.|+|+|++.......... .+........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999988887654 799999999975433211000 00100000011112334566889999
Q ss_pred EEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCC
Q 005444 362 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 441 (696)
Q Consensus 362 ~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~ 441 (696)
.|+|+|+..++++.+.. ...+.+++..+ ....|+.+|+||||.+.|.|..+...+..--.+.++.+..+
T Consensus 223 ~VitVS~~~a~ei~~~~-----~~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~ 291 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-----EEAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLEN 291 (489)
T ss_pred cceeeCHHHHHHhCcCC-----CCCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHH
Confidence 99999998877543310 01122222211 12578999999999999998654211100000111122222
Q ss_pred ccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHH
Q 005444 442 PEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 521 (696)
Q Consensus 442 ~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~ 521 (696)
+...++.+|+..+++.++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~ 359 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAEE 359 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHHH
Confidence 3344556888667788999999999999999999999999875 4799999999864 245678888888
Q ss_pred cCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc----CCeEEE
Q 005444 522 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGFH 597 (696)
Q Consensus 522 ~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d----g~~G~l 597 (696)
+ .++|.|.| .++.+++..+++ ++|+||+||.+|+||++.+|||+||+|+|+++.||+.|++.+ +.+|++
T Consensus 360 ~--~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l 432 (489)
T PRK14098 360 H--PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFI 432 (489)
T ss_pred C--CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeE
Confidence 7 47899999 666778889999 599999999999999999999999999999999999998864 679999
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++|+++++++|.+++. +..|++.|+++++++. .++|||+..+++|+++|+.
T Consensus 433 ~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 433 FHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred eCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 999999999999988763 5578999999887764 4789999999999999973
No 13
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=3.8e-42 Score=376.18 Aligned_cols=397 Identities=32% Similarity=0.540 Sum_probs=301.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+|++.|++|.. ..|.|+.||.+.++. +|++.|+++||+|+ |+|...+..... . ....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~----~---~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP----I---VELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC----c---cccc
Confidence 5889999976532 245689999999999 66666799999999 888654332111 0 1112
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.++.+.+++..+.. ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36788887764432 1233446667666766666666543 23899999999888888888999999999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
+...........+. +........+...++.+|.|+++|.......... . .....
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~--~~~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------Y--GAYPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------c--ccccc
Confidence 76543222111111 1112223346678899999999998765422111 0 11144
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.+||||+|.+.|.+........ +.++. .+++++|+|+||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 689999999998887654322111 11222 4567899999999999999999999999987
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCc
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 564 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 564 (696)
..++++|+|+|++..... ......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 112345778888999999999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 565 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 565 ltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999997776 89999999999999999999999999
Q ss_pred HHHHH
Q 005444 645 SERLM 649 (696)
Q Consensus 645 a~~l~ 649 (696)
+++|+
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99886
No 14
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-41 Score=384.27 Aligned_cols=435 Identities=16% Similarity=0.196 Sum_probs=285.2
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCcccc--ceee
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLER 240 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~--~~e~ 240 (696)
.|||+++|....|- ..|||..-++- .|.++|+++||+|. |+++.+..-... ... ....
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 48999999998865 57999999998 66667799999999 999887543210 000 0111
Q ss_pred ecC--CCceEEEEecccCccc--cc--ccccccCC-Cc---------ccHHHHH--HHHHHHHHHHh--CCCCeEEEEeC
Q 005444 241 VSG--TEHTHILRVPFRSEKG--IL--RQWISRFD-VW---------PYLETFT--EDVGSEITAEL--QGFPDFIIGNY 300 (696)
Q Consensus 241 i~~--~~~v~I~rvp~~~~~~--~~--~~wisr~~-i~---------p~l~~f~--~~~~~~i~~~~--~~~pDvIh~h~ 300 (696)
+.. ...+++....... -. ++ ..+..|.. ++ ...++|+ ..+.-++.... ..+|||||+|+
T Consensus 63 ~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 63 FPDLFGGPARLLAARAGG-LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred EeeeCCceEEEEEEEeCC-ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECC
Confidence 100 0011222111100 00 00 01122221 22 1223332 22222333222 46999999999
Q ss_pred CCchHHHHHHhh--cCCCcEEEEecCCCccCC-CCC-----CccHhhhh-hhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 301 SDGNLVASLLAY--KMGITQCTIAHALEKTKY-PDS-----DIYWKKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 301 ~~~~l~a~lla~--~~gip~v~t~H~l~~~~~-~~s-----~~~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
|.+++++.++.. ..++|.|+|+|++..... +.. .+.+..+. ....+.......+.++..||.|+|+|+..+
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a 221 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYA 221 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHH
Confidence 999988877753 346899999999854331 100 01111100 000111111235667899999999999876
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~ 451 (696)
...++... .+.+.+. +.....|+.+|+||||.+.|.|..+.......-.+.++.+..++...++.+|+
T Consensus 222 ~ei~~~~~------g~gl~~~------l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 222 LEIQGPEA------GMGLDGL------LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred HHHhcccC------CcChHHH------HHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCC
Confidence 64332100 0111110 01125689999999999999886542100000000011111122334556887
Q ss_pred CCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-EE
Q 005444 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF-RW 530 (696)
Q Consensus 452 l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V-~f 530 (696)
..+++.++|+++||+.++||++.|++|+..+.+ .+++|+|+|+|.. .+.+.+++++++++ +++ .|
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~ 355 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVV 355 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEE
Confidence 545678899999999999999999999998865 4699999999854 23567788887764 445 78
Q ss_pred eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC---------CeEEEECCC
Q 005444 531 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHIDPY 601 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg---------~~G~l~~p~ 601 (696)
+|+ .+++..++..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+
T Consensus 356 ~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~ 429 (485)
T PRK14099 356 IGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV 429 (485)
T ss_pred eCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC
Confidence 884 45788877535999999999999999999999999999999999999999875 689999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++++|.+++ .+..|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 430 d~~~La~ai~~a~-~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 430 TADALAAALRKTA-ALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred CHHHHHHHHHHHH-HHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHH
Confidence 9999999998754 24489999999999986 3789999999999999874
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=2.8e-41 Score=372.88 Aligned_cols=365 Identities=16% Similarity=0.193 Sum_probs=272.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|+..+...+.. ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~--------~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGIR--------YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCcc--------ccc
Confidence 6899998776 45799999999 66777799999999 9987643221110 112
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCch--HHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~--l~a~lla~~~gip~v~t~ 322 (696)
.++.+.++|+..... ....+....+...+.+.+. ..+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~--------~~~~~~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN--------QSTLPTFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC--------CccccchhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888888653211 1111111122222333332 348999999987653 346777888999999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|+..... +...... . ......++++|.++++|....+.. ....+++
T Consensus 121 h~~~~~~----~~~~~~~----~-----~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIHT----N-----KLLRFSLADVDHVICVSHTSKENT-------------------VLRASLD-- 166 (398)
T ss_pred ccccccc----chhhHHh----h-----HHHHHhhccCCEEEEecHhHhhHH-------------------HHHhCCC--
Confidence 9853211 1000000 0 112346789999999998754310 0011222
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.+||||+|.+.|.|.... .++++++|+++||+.+.||++.|++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999877664321 045678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 87789999999999876 567889999999999999999 6778899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998763 44454 48999999998877 566666678899999999999999
Q ss_pred HHHHHHHHHHHH
Q 005444 643 IYSERLMTLAGV 654 (696)
Q Consensus 643 ~~a~~l~~ly~~ 654 (696)
.+++++.++|+.
T Consensus 356 ~~~~~~~~~y~~ 367 (398)
T cd03796 356 DVAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 16
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2.8e-41 Score=374.34 Aligned_cols=396 Identities=12% Similarity=0.107 Sum_probs=283.8
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCC---ccccceee
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---TCNQRLER 240 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~---~~~~~~e~ 240 (696)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+....+.+. ........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 45789999999 66777799999999 999762211111 00100111
Q ss_pred ecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcE
Q 005444 241 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 318 (696)
Q Consensus 241 i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~ 318 (696)
.....+++++|+|...... ...+. .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123478999998643210 00000 0111 112333333333332236899999998654 456778888899999
Q ss_pred EEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecc
Q 005444 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 398 (696)
Q Consensus 319 v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~g 398 (696)
++++|+.+............ ....++. ...+..+++.||.|+++|+...+..++ .+
T Consensus 135 v~~~~d~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLLKG--GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCccC--cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 99999864321100000000 0000011 124667899999999999987653211 12
Q ss_pred cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHH
Q 005444 399 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 478 (696)
Q Consensus 399 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea 478 (696)
++ ..++.+||||+|.+.|.|....... ..++.+++ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 22 6689999999999888765321100 01123555 5677899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC
Q 005444 479 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558 (696)
Q Consensus 479 ~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 558 (696)
+.++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 67788899999987 699999 6778899999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCCCC--cchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 559 FYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 559 ~~E~----fGltvlEAMa~GlPVvat~~gG--~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.++.|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5778999999999999998877 468886 5999999999999999997766 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHH
Q 005444 633 KRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 633 ~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+++.++|||+.++++++++|+.
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999874
No 17
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.8e-41 Score=382.79 Aligned_cols=432 Identities=17% Similarity=0.164 Sum_probs=293.5
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccc--ccee---
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN--QRLE--- 239 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~--~~~e--- 239 (696)
||++||+..+|- ..+||...++. .|+++|+++||+|. |+|+.++........ ....
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999988763 37899999999 66666799999999 999887653211000 0000
Q ss_pred ------------eecCCCceEEEEecccCccccccccc--ccCCCccc-HH---HHHHHHHHHHHHHhCCCCeEEEEeCC
Q 005444 240 ------------RVSGTEHTHILRVPFRSEKGILRQWI--SRFDVWPY-LE---TFTEDVGSEITAELQGFPDFIIGNYS 301 (696)
Q Consensus 240 ------------~i~~~~~v~I~rvp~~~~~~~~~~wi--sr~~i~p~-l~---~f~~~~~~~i~~~~~~~pDvIh~h~~ 301 (696)
......++.+++++...... +.++ +....|.. .. .|...+...+.. ...+|||||+|+|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECch
Confidence 00011356666665432111 0000 00111111 11 233344444433 3679999999999
Q ss_pred CchHHHHHHhhcC------CCcEEEEecCCCccCCCCCC------ccH--hhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 302 DGNLVASLLAYKM------GITQCTIAHALEKTKYPDSD------IYW--KKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 302 ~~~l~a~lla~~~------gip~v~t~H~l~~~~~~~s~------~~~--~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
.+++++.+++... ++|+|+|+|++......... ..| ......+.+...+..++.++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9988888887763 89999999998654321100 000 000011122334456778899999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
...++.+.+.-. ++.+.+ .+.....|+.+|+||+|.+.|.|..+............+.....+...++
T Consensus 219 ~~~~~~i~~~~~------~~gl~~------~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEF------GEGLDG------LLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCC------CcchHH------HHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 887654332100 000100 01122579999999999999988654321100000111122222334456
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
++|+..++++++|+|+||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.++++++++ .++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~ 352 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGR 352 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCc
Confidence 67775467899999999999999999999999998764 499999999854 3346677777765 567
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCC------eEEEECCC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPY 601 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~------~G~l~~p~ 601 (696)
|.+.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++. +|+++++.
T Consensus 353 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 353 VAVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred EEEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 88766 344556667788 59999999999999999999999999999999999999999988 99999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
|+++++++|.+++. ...+++.|.++++++++ +.|||+.++++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 99999999998763 34578999999888764 57999999999999985
No 18
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=6.2e-40 Score=369.60 Aligned_cols=374 Identities=16% Similarity=0.229 Sum_probs=265.9
Q ss_pred CceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceee
Q 005444 161 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 240 (696)
Q Consensus 161 p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~ 240 (696)
.++|||++++ +..| .+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 3468999997 3322 145799999999 66667799999999 888653211 00
Q ss_pred ecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEE
Q 005444 241 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQC 319 (696)
Q Consensus 241 i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v 319 (696)
. .++.+++++..+. +. .... +....+...+.+.+. +.+|||||+|.+.. .+.+.++++..++|+|
T Consensus 107 ~---~g~~v~~~~~~~~-~~----~~~~---~~~~~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 F---HGAKVIGSWSFPC-PF----YQKV---PLSLALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred c---cCceeeccCCcCC-cc----CCCc---eeeccCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 1 1344444332111 00 0010 000001112333333 34899999998654 3455667788899999
Q ss_pred EEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccc
Q 005444 320 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 399 (696)
Q Consensus 320 ~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi 399 (696)
++.|+......+.....+ +.... ....+..++.+|.|+++|....+...+ .+.
T Consensus 173 ~~~h~~~~~~~~~~~~~~--~~~~~-----~~~~r~~~~~ad~ii~~S~~~~~~l~~--------------------~~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYTFSW--LVKPM-----WDIIRFLHRAADLTLVTSPALGKELEA--------------------AGV 225 (465)
T ss_pred EEEecCchhhhhcccchh--hHHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHH--------------------cCC
Confidence 999986432211111111 10000 112355788999999999887652211 011
Q ss_pred ccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHH
Q 005444 400 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 479 (696)
Q Consensus 400 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~ 479 (696)
....++.+||||+|.+.|.|......... .+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 226 -~~~~kv~vi~nGvd~~~f~p~~~~~~~~~------------------~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 -TAANRIRVWNKGVDSESFHPRFRSEEMRA------------------RLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred -CCcCeEEEeCCccCccccCCccccHHHHH------------------HhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 11568999999999998877543221111 1111 134678999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 480 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 480 ~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
+++ ++++|+|+|+|+. .+.+++++++ .+|.|+| .++.+++..+|+. +|+||+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCc
Confidence 876 5799999999876 5566666654 3699999 6777899999995 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc---CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHH
Q 005444 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 636 (696)
Q Consensus 560 ~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d---g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~ 636 (696)
.|+||++++|||+||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++ +|++.+++|++++++++
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 99999999999999999997776 89999999999999988
Q ss_pred HhCCHHHHHHHHHH-HHHH
Q 005444 637 ERYTWKIYSERLMT-LAGV 654 (696)
Q Consensus 637 ~~ysw~~~a~~l~~-ly~~ 654 (696)
++|||+.+++++++ .|+.
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~ 434 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSA 434 (465)
T ss_pred HhCCHHHHHHHHHHHHHHH
Confidence 78999999999998 6864
No 19
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.1e-39 Score=361.34 Aligned_cols=281 Identities=17% Similarity=0.244 Sum_probs=231.1
Q ss_pred CCCCeEEEEeCCCchHHHHHHhh--cCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~--~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
+.+||+||+|++..+..+..++. ..+.|.++|+|+...... .....+. ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~--------~~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR--------EVLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc--------hhhhhhh-----HHHHHHHHhCCEEEECC
Confidence 55899999999887777777665 445677889997532210 0001111 01234678999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
+...+..++ .|+ ...|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~~--------------------~g~--~~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQK--------------------MGC--PPEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHHH--------------------cCC--CHHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 876542111 122 267899999999998876532110
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
..++..|+|+||+.+.||++.+++|++.+.+..++++|+|+|+|+. .++++++++++++.++
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2345679999999999999999999999988778999999999976 6789999999999999
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 601 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~ 601 (696)
|.|+| .++.+++..+++. +|+||+||.. ||||++++|||+||+|||+|+.||..|++.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 6778899999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~-dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|+++++++|.+++ + ||+.+++|+++|++++.++|||+..++++.++|+.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999997766 7 99999999999999999999999999999999864
No 20
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.3e-39 Score=356.45 Aligned_cols=378 Identities=22% Similarity=0.311 Sum_probs=272.7
Q ss_pred eEEEEEccccccCCcccCCCCC-CCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeec
Q 005444 164 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 242 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~-tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~ 242 (696)
|||++|+...+ |+ .||.+.++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987655 34 499999999 555566776 7777 66543111 0
Q ss_pred CCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEe
Q 005444 243 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 243 ~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~ 322 (696)
...++.+.+++..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766542210 111111222222221 1111347999999998887777777778899999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|++......... .....+.+. ...+...++.+|.||++|....+...+. | .+++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~---------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLS--SWAEKTAIEAADRVIAVSGGMREDILKY---Y---------------PDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHH--HHHHHHHHhhCCEEEEccHHHHHHHHHH---c---------------CCCC--
Confidence 987532210000 001111111 1235678899999999998865532211 0 1222
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.+||||+|.+.|.|......+ ..+|+ ++++++|+|+||+.+.||++.|++++.++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5689999999999888765332211 22555 66788999999999999999999999987
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 561 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 561 (696)
. ++++|+++|++++ ..+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4688999998765 11234566777777765 34578765 26778999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH------HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~------e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +|++.+++|++++++++
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 88888886665 89999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHH
Q 005444 636 YERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 636 ~~~ysw~~~a~~l~~ly~~ 654 (696)
.++|||+.+++++.++|+.
T Consensus 368 ~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 368 EEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999863
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.6e-39 Score=350.04 Aligned_cols=366 Identities=19% Similarity=0.300 Sum_probs=267.2
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 68999973 34599999999 66667799999999 88865322100 01
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhc----CCCcEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 319 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~----~gip~v 319 (696)
.+++.+..++.... +......+.......+.+.+. ..+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY--------PLFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc--------chhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333332111 001111122222233333333 459999999987654443333322 389999
Q ss_pred EEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccc
Q 005444 320 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 399 (696)
Q Consensus 320 ~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi 399 (696)
++.|+........ ...+. ...+..++.+|.|++.|....+...+. |
T Consensus 116 ~~~h~~~~~~~~~--------~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~---~------------------ 161 (371)
T cd04962 116 TTLHGTDITLVGQ--------DPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL---F------------------ 161 (371)
T ss_pred EEEcCCccccccc--------cccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh---c------------------
Confidence 9999753211100 11111 123457889999999998865422111 0
Q ss_pred ccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHH
Q 005444 400 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 479 (696)
Q Consensus 400 ~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~ 479 (696)
....++.+||||+|...|.+......+ +.++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 125689999999998877654332211 12444 56778999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 480 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 480 ~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
..+.+. .+++|+|+|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 5699999999977 56788889999999999999943 357888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhC
Q 005444 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 639 (696)
Q Consensus 560 ~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~y 639 (696)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ .||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997766 899999999999999988999
Q ss_pred CHHHHHHHHHHHHHH
Q 005444 640 TWKIYSERLMTLAGV 654 (696)
Q Consensus 640 sw~~~a~~l~~ly~~ 654 (696)
||+.+++++.++|+.
T Consensus 356 s~~~~~~~~~~~y~~ 370 (371)
T cd04962 356 DSERIVPQYEALYRR 370 (371)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999863
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=2.8e-38 Score=347.20 Aligned_cols=374 Identities=16% Similarity=0.202 Sum_probs=274.1
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i 241 (696)
|+-||++++.--+|-|. ...||++.++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67899999988887542 34699999999 66666643 899 9988755311 010
Q ss_pred cCCCceEEEEecccCccc-ccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE
Q 005444 242 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 320 (696)
Q Consensus 242 ~~~~~v~I~rvp~~~~~~-~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~ 320 (696)
...+|+.|.++++....+ ...+|-+- ..+ .|...+...+......++||||+|... .+...+..+..+.|++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 111356777776643221 12233222 222 333344444433324579999999855 34455555666789999
Q ss_pred EecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccc
Q 005444 321 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 400 (696)
Q Consensus 321 t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~ 400 (696)
+.|.... ...+..++.||++|....+...+ +.
T Consensus 127 ~~h~~~~--------------------------~~~~~~~~~ii~~S~~~~~~~~~---------------------~~- 158 (380)
T PRK15484 127 HMHNAFE--------------------------PELLDKNAKIIVPSQFLKKFYEE---------------------RL- 158 (380)
T ss_pred EEecccC--------------------------hhHhccCCEEEEcCHHHHHHHHh---------------------hC-
Confidence 9996321 01234678999999876542110 11
Q ss_pred cCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHH
Q 005444 401 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 480 (696)
Q Consensus 401 ~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~ 480 (696)
...++.+||||+|.+.|.+......+ +.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 159 -~~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 159 -PNADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -CCCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 25689999999999888764332111 22454 556789999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC
Q 005444 481 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 560 (696)
Q Consensus 481 ~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 560 (696)
++.+..|+++|+|+|++.... ..+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~~---~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTASS---KGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCcccc---ccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 998888999999999986521 1123345667777887765 5799999 6778899999995 9999999975
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEE-EECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHh
Q 005444 561 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 638 (696)
Q Consensus 561 -E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~-l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ 638 (696)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+|+++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568999999999997766 88985 78999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 005444 639 YTWKIYSERLMTLAGV 654 (696)
Q Consensus 639 ysw~~~a~~l~~ly~~ 654 (696)
|||+.++++++++|..
T Consensus 362 fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 362 YSWEGVTQRFEEQIHN 377 (380)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999864
No 23
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=9.7e-38 Score=340.76 Aligned_cols=365 Identities=16% Similarity=0.196 Sum_probs=261.5
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++|.++. ..||.+.++. +|++.|.+.|+++. |++....+ ...... . .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~~~---~-~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRKRI---Q-R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHHHH---H-h
Confidence 677776543 3599999999 55556788899987 77632111 111111 1 1
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcE-EEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~-v~t~H 323 (696)
.++.+++++.... . .+ .+...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~----------~-~~----~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG----------K-DV----AVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC----------C-Ch----HHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2467777654321 0 11 122234444444 3999999997544 33445566667774 44555
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+....... ...| .+.+ ..+.....+|.+|++|....+...+. .++..
T Consensus 113 ~~~~~~~~--~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~---------------------~~~~~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP---------------------VKVPP 159 (374)
T ss_pred Ccccccch--hhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh---------------------cCCCh
Confidence 43211100 0011 1111 22344567899999998765522111 12225
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.|.|.......... + ... .+++++|+++||+.+.||++.+++++..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~~----------------~-~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPILP----------------P-DFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhhH----------------h-hcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 789999999999888765322111000 0 111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC
Q 005444 484 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 559 (696)
Q Consensus 484 ~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 559 (696)
+..+ +++|+++|+|+. .+.+++.++++++.++|.|+|.+ .++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 689999999876 56788899999999999999942 468888884 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhC
Q 005444 560 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 639 (696)
Q Consensus 560 ~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~y 639 (696)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997766 799999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 005444 640 TWKIYSERLMTLAGV 654 (696)
Q Consensus 640 sw~~~a~~l~~ly~~ 654 (696)
||+.++++|.++|+.
T Consensus 358 s~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 358 SINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999864
No 24
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.3e-37 Score=343.38 Aligned_cols=365 Identities=15% Similarity=0.195 Sum_probs=247.7
Q ss_pred HHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHH---
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTE--- 279 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~--- 279 (696)
+|+++|+++||+|+ ++|....... .+ ++++++++..+... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57788899999999 9987743210 11 57888877553311 123444433322
Q ss_pred ---HHHHHHHH--HhCCCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCC----CCccHhhhhhhhhccch
Q 005444 280 ---DVGSEITA--ELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPD----SDIYWKKFDEKYHFSCQ 349 (696)
Q Consensus 280 ---~~~~~i~~--~~~~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~----s~~~~~~~~~~y~~~~~ 349 (696)
.+.+.+.. ..+.+|||||+|...+. +..+.+. .++|+|...|.+....... ........ ...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 12222222 12568999999975542 2233333 4588887665322111100 00000000 00010011
Q ss_pred hhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHh
Q 005444 350 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 429 (696)
Q Consensus 350 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~ 429 (696)
.......++.+|.||++|....+..+ ..+..|+.|||||+|.+.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~------------------------~~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFP------------------------AELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCc------------------------HhhccceEEeCCCccccccCCCchhhhccc
Confidence 11234578999999999988755211 112468999999999999887643221110
Q ss_pred hhhcchhhhcCCccccccccCCCCCCCCCEEEEEcc-ccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHH
Q 005444 430 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 508 (696)
Q Consensus 430 ~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR-L~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~ 508 (696)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..|+++|+|+|++.. ......+.
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~-~~g~~~~~ 262 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGV-SYGAPPPD 262 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCc-ccCCCCCC
Confidence 01112 457789999998 9999999999999999988889999999998532 10000000
Q ss_pred -HHHHHHH-HHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcc
Q 005444 509 -IAEIEKM-HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA 586 (696)
Q Consensus 509 -~~~~~~l-~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~ 586 (696)
..+.+.+ +++..+++ .++|.|+| .++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..
T Consensus 263 ~~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 263 GESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 0012222 22222222 47899999 7788999999995 999999999999999999999999999999999999
Q ss_pred hhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 587 EIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 587 EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
|++.++.+|++++++|+++++++|.+++ +|++.+.+|+++|++++.++|||+.++++|+
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999999999999999999999997776 8999999999999999988999999999886
No 25
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=8.9e-39 Score=328.58 Aligned_cols=363 Identities=17% Similarity=0.219 Sum_probs=282.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
++|+++|+|.|| .+||.+.++. .|++.|.+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 479999999994 5799999999 88999999999998 999998776554322
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchH--HHHHHhhcCCCcEEEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL--VASLLAYKMGITQCTI 321 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l--~a~lla~~~gip~v~t 321 (696)
+.+.+++.+|+.. ..+...+|.+...+.-+...+. +++..|||+|.+.+.+ -+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v--------~~n~tT~ptv~~~~Pllr~i~l---rE~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVV--------GYNQTTFPTVFSDFPLLRPILL---RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeee--------eecccchhhhhccCcccchhhh---hhceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 2357888888754 2233344443332222222333 3389999999988744 4677889999999999
Q ss_pred ecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 322 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 322 ~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
-|++..-. ++.-....... .+.+...|.+||+|+...+++ .....++
T Consensus 121 dHSlfGfa----d~~si~~n~ll---------~~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNKLL---------PLSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhccee---------eeeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 99974322 22211111111 236789999999998754421 1112333
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
+.|+.+|||.++...|.|...... ..+...|+.++||..+||+|.|++++++
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 779999999999999999543310 2334679999999999999999999999
Q ss_pred hhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCC
Q 005444 482 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 561 (696)
Q Consensus 482 l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 561 (696)
+.+++|+++|+|+|+||. ...+++..+++.++++|.++| .++.+++-+.+.. .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999998 667888999999999999999 8899999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
+||++++|||+||+|||+|++||++|++.++ -......+++++++++.+++.++...|... .+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~~~-------h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPLEF-------HDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCchhH-------HHHHHHhccH
Confidence 9999999999999999999999999999654 233445579999999999998887776533 3566788999
Q ss_pred HHHHHHHHHHHH
Q 005444 642 KIYSERLMTLAG 653 (696)
Q Consensus 642 ~~~a~~l~~ly~ 653 (696)
+..+++.+++|.
T Consensus 354 ~dVa~rTekvy~ 365 (426)
T KOG1111|consen 354 KDVAERTEKVYD 365 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999964
No 26
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=1.5e-37 Score=340.72 Aligned_cols=386 Identities=20% Similarity=0.259 Sum_probs=262.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .+. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc--hhccCC
Confidence 79999987543 589999999 66667799999999 998642211 010 001111
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHH--HHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 321 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~--~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t 321 (696)
++.+...+.....+. ..+ ...+..+.......+. .....+||+||+|....+..+ +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211100000 000 0011111111111111 122568999999875543322 223334889999
Q ss_pred ecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 322 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 322 ~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
.|..... . .....+ ....++.. ....+..+++.+|.|+++|....+..++.. ....
T Consensus 122 ~h~~~~~-~-~~~~~~--~~~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQL-L-AQRGSL--LKRLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHH-h-cCCCcH--HHHHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 9943211 0 000011 11111110 112466789999999999987654221110 0111
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
..++.+|+||+|.+.|.|......+ +..+. .+++++|+++||+.+.||++.+++++.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888664322100 11122 4677899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccccCChhHHHHHHHccccEEEeC
Q 005444 482 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 557 (696)
Q Consensus 482 l~~~~---~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 557 (696)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++..++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR----VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC----CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98775 79999999998651 12334556788999999 99999999999 6778899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH
Q 005444 558 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 637 (696)
Q Consensus 558 S~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~ 637 (696)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 8999999997766 8999999999999999999
Q ss_pred hCCHHHHHHHH
Q 005444 638 RYTWKIYSERL 648 (696)
Q Consensus 638 ~ysw~~~a~~l 648 (696)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998764
No 27
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3.1e-37 Score=356.96 Aligned_cols=434 Identities=13% Similarity=0.147 Sum_probs=279.9
Q ss_pred HhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcchHHHHhcCCCcee-EEEEEccccccCCcccCCCCCCCchhHHHHH
Q 005444 117 VLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVF-NVVILSPHGYFGQANVLGLPDTGGQVVYILD 195 (696)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~-rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~ 195 (696)
-+|.+|=|.---++--|+.-+-+++..+-+-- +...+... -.+. ||+++.+... .||.+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~rIl~vi~sl~-----------~GGAEr~~~~ 302 (694)
T PRK15179 238 ALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYDAGP---ESFVGPVLMINGSLG-----------AGGAERQFVN 302 (694)
T ss_pred HHHHcCcccccCCCceeeeeHHHHHHHHhhcC-cccccCCC---CCCcceEEEEeCCCC-----------CCcHHHHHHH
Confidence 46777776655566667777777666544211 00000000 1134 7888865443 5999999995
Q ss_pred HHHHHHHHHHHHHHHcCCC----------ccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccc--c
Q 005444 196 QVRALENEMLLRIKRQGLD----------ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILR--Q 263 (696)
Q Consensus 196 ~~raL~~~L~~~L~~~G~e----------V~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~--~ 263 (696)
+|. +|..+|.+ -.+.|++++....+..+ .+...+. ..++.+..++..+..+... .
T Consensus 303 La~--------~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~-~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~ 369 (694)
T PRK15179 303 TAV--------ALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGAD-FFAATLA----DAGIPVSVYSDMQAWGGCEFSS 369 (694)
T ss_pred HHH--------HHHhcccCcccccCccCCCCcEEEEEecccccCcc-hHHHHHH----hCCCeEEEeccCCccCcccccc
Confidence 554 55776441 01223344322111101 1111111 1245666555443211000 0
Q ss_pred ccccCC----Ccc-cHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE-EecCCCccCCCCCCccH
Q 005444 264 WISRFD----VWP-YLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYW 337 (696)
Q Consensus 264 wisr~~----i~p-~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~-t~H~l~~~~~~~s~~~~ 337 (696)
+..... ..| ........+.+.+. +.+|||||+|.+.+++++.++++..++|+|+ +.|++...... . .|
T Consensus 370 ~~~~~~~~~~~lp~~~~~~~~~L~~~lk---~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~ 443 (694)
T PRK15179 370 LLAPYREYLRFLPKQIIEGTTKLTDVMR---SSVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RY 443 (694)
T ss_pred cchhhHHHhhhcchhHHHHHHHHHHHHH---HcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HH
Confidence 000000 011 11122233444444 3489999999999988889999889999866 56765321110 0 11
Q ss_pred hhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCC
Q 005444 338 KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI 417 (696)
Q Consensus 338 ~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~ 417 (696)
+ ..+.. ....+....++.+|++|....+...+ ..|+ ...|+.|||||||...
T Consensus 444 ~---~~~~~----l~~~l~~~~~~i~Vs~S~~~~~~l~~-------------------~~g~--~~~kI~VI~NGVd~~~ 495 (694)
T PRK15179 444 R---VEYDI----IYSELLKMRGVALSSNSQFAAHRYAD-------------------WLGV--DERRIPVVYNGLAPLK 495 (694)
T ss_pred H---HHHHH----HHHHHHhcCCeEEEeCcHHHHHHHHH-------------------HcCC--ChhHEEEECCCcCHHh
Confidence 1 11111 11112223445667777654331110 1122 3679999999999887
Q ss_pred CCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCc
Q 005444 418 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGY 497 (696)
Q Consensus 418 f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g 497 (696)
|.+.......... +....+++.++|+++||+.+.||++.+++|++++.+..|+++|+|+|+|
T Consensus 496 f~~~~~~~~~~~~------------------~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G 557 (694)
T PRK15179 496 SVQDDACTAMMAQ------------------FDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGG 557 (694)
T ss_pred cCCCchhhHHHHh------------------hccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccC
Confidence 7653322111000 1111134567899999999999999999999999887899999999999
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcE
Q 005444 498 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 577 (696)
Q Consensus 498 ~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 577 (696)
+. .++++++++++++.++|.|+|++. ++..+|+ ++|+||+||.+|+||++++|||+||+||
T Consensus 558 ~~------------~~~L~~l~~~lgL~~~V~flG~~~------dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PV 618 (694)
T PRK15179 558 PL------------LESVREFAQRLGMGERILFTGLSR------RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPV 618 (694)
T ss_pred cc------------hHHHHHHHHHcCCCCcEEEcCCcc------hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeE
Confidence 76 678999999999999999999543 5778888 5999999999999999999999999999
Q ss_pred EEcCCCCcchhhccCCeEEEECCCCH--HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 578 FATCHGGPAEIIEHGASGFHIDPYHP--DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 578 vat~~gG~~EiI~dg~~G~l~~p~d~--e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
|+|+.||+.|+|.++.+|++++++|. ++++++|.+++..+..++ .+++++++++.++|||+.++++++++|+
T Consensus 619 Vat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 619 VTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred EEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999999999999998874 689999988875444444 5678899999899999999999999985
No 28
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=2.7e-37 Score=334.81 Aligned_cols=281 Identities=19% Similarity=0.288 Sum_probs=230.5
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..+||+||+|....+..+..++++.|+|++++.|+.......... .... +.. ....+...++.+|.|+++|+.
T Consensus 80 ~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~----~~~~-~~~--~~~~~~~~~~~~d~ii~~s~~ 152 (367)
T cd05844 80 RHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL----LRSR-WAL--YARRRRRLARRAALFIAVSQF 152 (367)
T ss_pred hhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh----cccc-hhH--HHHHHHHHHHhcCEEEECCHH
Confidence 348999999987777788888899999999999975432211110 0000 000 112344578899999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+...+ .|+ ...++.++|||+|.+.|.|...
T Consensus 153 ~~~~~~~--------------------~~~--~~~~i~vi~~g~d~~~~~~~~~-------------------------- 184 (367)
T cd05844 153 IRDRLLA--------------------LGF--PPEKVHVHPIGVDTAKFTPATP-------------------------- 184 (367)
T ss_pred HHHHHHH--------------------cCC--CHHHeEEecCCCCHHhcCCCCC--------------------------
Confidence 6552111 122 2668999999999887755311
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
..+++.++++|++.+.||++.+++|+..+.+..++++|+|+|+|+. .++++++++++++.++|+
T Consensus 185 ----~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~ 248 (367)
T cd05844 185 ----ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVT 248 (367)
T ss_pred ----CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEE
Confidence 3356789999999999999999999999988788999999998865 567888999999999999
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~ 603 (696)
|+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|+
T Consensus 249 ~~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~ 323 (367)
T cd05844 249 FLG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDV 323 (367)
T ss_pred ECC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCH
Confidence 999 6778899999995 999999997 59999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
++++++|.+++ +|++.+++|+.++++++.++|||+.+++++.+
T Consensus 324 ~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 324 AALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999997776 89999999999999999999999999999875
No 29
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.8e-36 Score=326.79 Aligned_cols=361 Identities=16% Similarity=0.188 Sum_probs=252.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+||+.+++| |..||++.++. +|+++|.++||+|+ |+|........ . ...
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~------~---~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK------E---TEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc------c---ccc
Confidence 69999999986 45799999999 66667799999999 88866332211 0 112
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.+++++++|.....+ ..+.......+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG-----------LGTIIYDILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc-----------hhhhHHHHHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 357888777543111 0000000011111111 133556666544443 33444555669999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
...... .|......+ ....+..+++.+|.|+++|+...+..+.. .+ ..
T Consensus 118 ~~~~~~-----~~~~~~~~~----~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---------------------~~--~~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAKRY----LKFGEKLAVKFADRLIADSPGIKEYLKEK---------------------YG--RD 165 (363)
T ss_pred cceeec-----ccccchhHH----HHHHHHHHHhhccEEEeCCHHHHHHHHHh---------------------cC--CC
Confidence 643221 111111110 11235667899999999998876532111 11 12
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
+ .+||||+|...+.+.... . +.++. ++++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---~------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---L------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---H------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998766541110 0 11232 234578899999999999999999998754
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC-CC
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 562 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~-E~ 562 (696)
+++|+|+|+++. ...+.+.++ .+++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677888999999 6778899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999965 7999988775 888886655 899999999999999998899999
Q ss_pred HHHHHHHHHHH
Q 005444 643 IYSERLMTLAG 653 (696)
Q Consensus 643 ~~a~~l~~ly~ 653 (696)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=6.5e-37 Score=340.09 Aligned_cols=399 Identities=15% Similarity=0.116 Sum_probs=269.8
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccc--
Q 005444 182 GLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG-- 259 (696)
Q Consensus 182 G~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~-- 259 (696)
|.-..||.++.+..+|-++.+...+.=+-.|+.|.-+|-++||.+....|..+....-...+.+...+-+++-..+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 334569999999988887766655555556888888888999997766554432111111222233444444222111
Q ss_pred ----ccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEE-EecCCCccCCCCCC
Q 005444 260 ----ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSD 334 (696)
Q Consensus 260 ----~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~-t~H~l~~~~~~~s~ 334 (696)
.++.+++. +.|-.-.-...+...++ ..+|||||+|...+++.+.++++..|+|+++ +.|..... .
T Consensus 249 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~ir---~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~-----~ 318 (578)
T PRK15490 249 IESPELRLLLSH--LPPVCKYGIKHLVPHLC---ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPV-----V 318 (578)
T ss_pred ccchHHHHHHhc--CChHHHHHHHHHHHHHH---HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCc-----c
Confidence 01111110 00111011112223333 4599999999988888899999999999865 46652110 0
Q ss_pred ccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCc
Q 005444 335 IYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD 414 (696)
Q Consensus 335 ~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD 414 (696)
....+...+..... .......+| +++.|....+...+ .. ++++.|+.|||||+|
T Consensus 319 -~~r~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~-------------------~l--gip~~KI~VIyNGVD 372 (578)
T PRK15490 319 -RKRLFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYAD-------------------WL--KLEAKHFQVVYNGVL 372 (578)
T ss_pred -hhhHHHHHHHHhhh---hceeEecch-hhhccHHHHHHHHH-------------------Hh--CCCHHHEEEEeCCcc
Confidence 00111111110000 001133344 44555443221110 11 233779999999999
Q ss_pred CCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEE
Q 005444 415 MDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV 494 (696)
Q Consensus 415 ~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIv 494 (696)
...|.|.......... . ...++ +++.++|+++||+.+.||...+++++.++.+..|+++|+|+
T Consensus 373 ~~rf~p~~~~~~~~r~---~------------~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIV 435 (578)
T PRK15490 373 PPSTEPSSEVPHKIWQ---Q------------FTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLV 435 (578)
T ss_pred hhhcCccchhhHHHHH---H------------hhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEE
Confidence 9988875432111000 0 01222 35567999999999999999999999988777789999999
Q ss_pred eCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC
Q 005444 495 AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG 574 (696)
Q Consensus 495 G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G 574 (696)
|+|+. .++++++++++++.++|.|+|++ .++..+|+ ++|+||+||.+|+||++++|||+||
T Consensus 436 GdG~~------------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~La-aADVfVlPS~~EGfp~vlLEAMA~G 496 (578)
T PRK15490 436 GDGDL------------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQ-KMNVFILFSRYEGLPNVLIEAQMVG 496 (578)
T ss_pred eCchh------------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHH-hCCEEEEcccccCccHHHHHHHHhC
Confidence 99976 67899999999999999999952 46788888 4999999999999999999999999
Q ss_pred CcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 575 LPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 575 lPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|||+|+.||..|+|.++.+|+++++.|++++++++..+ .++..+.+....|+++|++++.++|||+.++++|.++|.
T Consensus 497 lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 497 VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998877432 233455556678999999999999999999999999986
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=3.4e-36 Score=329.05 Aligned_cols=287 Identities=20% Similarity=0.207 Sum_probs=213.5
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..+|||||+|++.+..+. .+.+..++|+|++.|+..... ....| .+ ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~~-~~~~~~~~~~i~~~H~~~~~~---~~~~~-------~~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLALP-LFKKKRGRPWIWRCHIDLSSP---NRRVW-------DF------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhHH-HhhhcCCCeEEEEeeeecCCC---cHHHH-------HH------HHHHHHhCCEEeecHHH
Confidence 458999999988753332 223334899999999743211 01111 11 12356789998888844
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCC--CCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~--p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 321 1121 3455 999999975322 22111110 0112
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
.+|+ ++++++|+++||+++.||++.++++++.+.+..++++|+|+|+|+.. +.+. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cchh---HHHHHHHHHHhCCCCC
Confidence 3565 67889999999999999999999999999877789999999998651 1111 2234455556778889
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHH
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 607 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la 607 (696)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..+++.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998421 36788889998 59999999999999999999999999999999999999999999999987 467888
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++|.+++ .|++.+++|+++|++++.++|||+.++++++++|+.
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 8886665 899999999999999998999999999999999863
No 32
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.8e-36 Score=324.67 Aligned_cols=347 Identities=18% Similarity=0.218 Sum_probs=258.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccc
Q 005444 185 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 264 (696)
Q Consensus 185 ~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~w 264 (696)
+.||.+.++. +|+++|+++||+|. +++...+.. ... ...++.++++++...+.
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AEL----EAEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHH----HhcCCeEEEccccccch-----
Confidence 3499999999 66677799999998 887532111 011 11245566666543211
Q ss_pred cccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhh
Q 005444 265 ISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 344 (696)
Q Consensus 265 isr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y 344 (696)
+..+ .+...+.+.+. ..+||+||+|.....+.+.++++..++|++++.|+...... .
T Consensus 61 ------~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------~- 117 (355)
T cd03819 61 ------LRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------------R- 117 (355)
T ss_pred ------hhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------------H-
Confidence 1111 12223333333 34999999999877777888888889999999997633110 0
Q ss_pred hccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchH
Q 005444 345 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 424 (696)
Q Consensus 345 ~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~ 424 (696)
....+..+|.++++|+...+..++ . .+....++.+||||+|...|.+....
T Consensus 118 --------~~~~~~~~~~vi~~s~~~~~~~~~-------------------~--~~~~~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 118 --------YNAIMARGDRVIAVSNFIADHIRE-------------------N--YGVDPDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred --------HHHHHHhcCEEEEeCHHHHHHHHH-------------------h--cCCChhhEEEecCCccccccCccccc
Confidence 123467899999999876553221 1 12236799999999999888664322
Q ss_pred HHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCc
Q 005444 425 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 504 (696)
Q Consensus 425 ~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~ 504 (696)
...... .++.++. ++++++|+++||+.+.||++.+++++.++.+..++++|+|+|++..
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 111100 1122333 5677899999999999999999999999988778999999999865
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCCC
Q 005444 505 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 583 (696)
Q Consensus 505 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat~~g 583 (696)
+....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11234556678888899999999994 4478899994 99999999 8999999999999999999999999
Q ss_pred CcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 584 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 584 G~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
|..|++.++.+|++++++|+++++++|..++ ..+++.+.+++++|++.+.++|||+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999999999999999999999997554 268999999999999999999999853
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=2.6e-35 Score=315.00 Aligned_cols=372 Identities=19% Similarity=0.239 Sum_probs=262.2
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|.......... .....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~~~ 53 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLLV------ALNGV 53 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccchh------hccCc
Confidence 6888987665 46799999999 66667789999999 8876532211100 00000
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~v~t~ 322 (696)
............ ..+. ...+.+ . ..........+||+||+|.... ...+..+++..++|++++.
T Consensus 54 -~~~~~~~~~~~~----~~~~--~~~~~~------~-~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 54 -PVKLFSINVAYG----LNLA--RYLFPP------S-LLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -eeeecccchhhh----hhhh--hhccCh------h-HHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000000 0000 000000 1 1111222255899999987433 4556666778899999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|+....... ....+.. ....+..+...++.++.++++|.......+. ..+
T Consensus 120 ~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~-----------------------~~~ 169 (375)
T cd03821 120 HGMLDPWAL-PHKALKK------RLAWFLFERRLLQAAAAVHATSEQEAAEIRR-----------------------LGL 169 (375)
T ss_pred ccccccccc-ccchhhh------HHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-----------------------hCC
Confidence 986432211 0001111 1111223456788999999998765542110 112
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.+||||+|.+.|.+......+ ..++. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 6689999999999888664432211 11333 56788999999999999999999999999
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+.+++++|+|+|.+.. .+...++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 88888999999998765 22345566678899999999999 6777899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998875 5599999997766 899999999999999999999999
Q ss_pred HHHHHHH
Q 005444 643 IYSERLM 649 (696)
Q Consensus 643 ~~a~~l~ 649 (696)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999886
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=7.4e-35 Score=312.95 Aligned_cols=272 Identities=21% Similarity=0.292 Sum_probs=224.7
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||+|+... ..++.+.++..++|++++.|+......... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 445555555668999999996432111000 123456889999999999
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
..++..+.. .+. ...++.+||||+|.+.|.+....
T Consensus 140 ~~~~~l~~~-------------------~~~--~~~~~~vi~~~~d~~~~~~~~~~------------------------ 174 (355)
T cd03799 140 YNRQQLIRL-------------------LGC--DPDKIHVVHCGVDLERFPPRPPP------------------------ 174 (355)
T ss_pred HHHHHHHHh-------------------cCC--CcccEEEEeCCcCHHHcCCcccc------------------------
Confidence 876532211 112 26789999999998877554200
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
...+++.|+++|++.+.||++.+++++.++.+..++++|+|+|+++. .+.+.+.++++++.++|
T Consensus 175 ----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 175 ----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred ----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 03466789999999999999999999999987778999999999877 56788889999999999
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCC
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d 602 (696)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..+++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 6778899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 005444 603 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 648 (696)
Q Consensus 603 ~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l 648 (696)
.++++++|.+++ .|++.+.+|++++++++.++|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999998776 799999999999999999999999998763
No 35
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=8.3e-35 Score=310.73 Aligned_cols=333 Identities=15% Similarity=0.166 Sum_probs=239.3
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++|++..+|- +.|..||.++++. +|++.|.++||+|. +++...+.... .
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~------ 52 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----P------ 52 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----c------
Confidence 7999999876642 3467899999999 66666799999999 88865322110 0
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
.......+.. ................+.+.+. ..+||+||+|.+..... +++..++|+|++.|
T Consensus 53 --~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 53 --LVPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred --eeeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0011110100 0000000011112222222222 45899999999887655 56778999999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+...... .+ ........+.++++|....+. . .. .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 8643211 00 013456778888988776441 0 01 1
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.|.+. ..++..|+|+||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877551 2346689999999999999999999764
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEeccccccCChhHHHHHHHccccEEEeCCC-CC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 561 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E 561 (696)
.+++|+|+|++.. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444433 568899999 6777899999995 999999997 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999997654 332 25677888899999
Q ss_pred HHHHHHHHHHHH
Q 005444 642 KIYSERLMTLAG 653 (696)
Q Consensus 642 ~~~a~~l~~ly~ 653 (696)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999884
No 36
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.5e-34 Score=310.72 Aligned_cols=354 Identities=19% Similarity=0.241 Sum_probs=257.0
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++..+ |+.||.+.++. +|++.|.++||+|+ |++......... ...
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~--- 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------EER--- 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------hhc---
Confidence 6899987665 45799999999 67777799999999 887653322111 111
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.+..+.+++.... ....+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLN----------VASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccc----------cccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 1335555543211 011111111 111111 2256999999998765333333333368899999996
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
..... .. ....+. ..+...++.+|.|+++|....+.... +..+..
T Consensus 116 ~~~~~----~~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KL----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----ch----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 32111 00 111111 12345789999999999876542110 111146
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.+||||+|.+.+.+....... .... +.++++|+++||+.+.||++.+++++.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 88999999999877654322110 0111 456789999999999999999999999885
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC--CCC
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 562 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~ 562 (696)
+++|+|+|+|+. ...+.++++++++.++|.|+| .++..++..+++. ||++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 799999999876 567788888899999999999 7778899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhcc-CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~d-g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++++.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999999886 89999999999999999997776 89999999999999999999999
Q ss_pred HHHH
Q 005444 642 KIYS 645 (696)
Q Consensus 642 ~~~a 645 (696)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9764
No 37
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=2.6e-34 Score=304.53 Aligned_cols=374 Identities=22% Similarity=0.323 Sum_probs=273.3
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++...+ ..||...++. .|++.|.+.||+|. +++............ ..
T Consensus 1 kI~ii~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~~~------~~- 52 (374)
T cd03801 1 KILLVTPEYPP---------SVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEEEV------GG- 52 (374)
T ss_pred CeeEEecccCC---------ccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCceeee------cC-
Confidence 68999876652 3689999999 66667788999999 887764332111000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
......... ...........+...+.+.+. ..+||+||++.+.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPL----------LRVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCcc----------cccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 000000000 000011111122222223232 34899999999887665557788889999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
......... .. . ........+...++.+|.+++.|....+...+. .+. ...
T Consensus 118 ~~~~~~~~~---~~-~----~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 168 (374)
T cd03801 118 LEFGRPGNE---LG-L----LLKLARALERRALRRADRIIAVSEATREELREL-------------------GGV--PPE 168 (374)
T ss_pred chhhccccc---hh-H----HHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCC--CCC
Confidence 754332111 00 0 000111234567899999999998776532211 111 135
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.++|||+|...+.+.. ...+ . .... ..+++.|+++|++...||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-R------------------RLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-h------------------hcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876543 1110 0 0111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCc
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 564 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 564 (696)
..++++|+|+|++.. ...+.+++++++..++|.|.| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997765 667788888889999999999 6777899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 565 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 565 ltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ .|++.+.++++++++.+.+.|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999899999999999999999997766 89999999999999899999999999
Q ss_pred HHHHHHHHH
Q 005444 645 SERLMTLAG 653 (696)
Q Consensus 645 a~~l~~ly~ 653 (696)
++++.++|+
T Consensus 366 ~~~~~~~~~ 374 (374)
T cd03801 366 AARTEEVYY 374 (374)
T ss_pred HHHHHHhhC
Confidence 999998863
No 38
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=2.4e-34 Score=308.71 Aligned_cols=387 Identities=18% Similarity=0.238 Sum_probs=272.7
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++||.+.+| ..||.+.++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999987663 3488999999 66666789999999 8876543322111000 001122
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~v~t~ 322 (696)
.++++.+++...... ..++.+ +.. ...|.......+.. ...+||+||++.+.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~-~~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLN-YLSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHh-hhHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 357777777644321 000000 011 11222222333321 256899999998432 4556666777799999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccC
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 402 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~ 402 (696)
|+.+............. ...+.+. ...+...++.+|.++++|....+..+ ..+..
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~d~vi~~s~~~~~~~~----------------------~~~~~ 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLL--RKLERLIYRRADAIVVISPGMREYLV----------------------RRGVP 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHH--HHHHHHHHhcCCEEEEECHHHHHHHH----------------------hcCCC
Confidence 98754322111100000 0000111 12355678999999999988765221 01223
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHh
Q 005444 403 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 482 (696)
Q Consensus 403 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l 482 (696)
..++.++|||+|...+.+......+ ..... ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877665432210 00111 45678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+. ++++|+|+|++.. .+.+.+++...++ ++|.++| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999876 4566666666666 5699999 6778899999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH
Q 005444 563 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 637 (696)
Q Consensus 563 f-----GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~ 637 (696)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++++.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999997776 8999999999999999988
Q ss_pred hCCHHHHHHHHH
Q 005444 638 RYTWKIYSERLM 649 (696)
Q Consensus 638 ~ysw~~~a~~l~ 649 (696)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998863
No 39
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.1e-34 Score=308.58 Aligned_cols=363 Identities=19% Similarity=0.262 Sum_probs=261.0
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++.... |..||.+.++. .|+++|+++||+|. ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899987665 34589999999 67777899999999 888664321110 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H 323 (696)
....+...+...... . +.... ....+.+.+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~-----~-~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPE-----I-RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccc-----e-Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 112222222111110 0 00000 0112222222 34899999886654 46677778889999999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+.......... ........ ........+.+|.+++.|....+... ..+ .
T Consensus 116 ~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYYG--LGPLSWLA-----WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhcc--cchHhHhh-----HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 75431111000 00000000 11234567899999999988654100 111 4
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+++||+|.+.|.|........ +.++ +.++++|+++|++.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5889999999998887654332211 1122 345778999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+. ++++|+|+|+++. .+.++ +..++|.|.| .++.+++..+++. +|++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8899999999876 22232 4567899999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHH
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 643 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~ 643 (696)
|++++|||+||+|||+++.|+..|++.++.+|++++++|.++++++|.+++ .|++.+++|++++++.+ ++|||+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999997766 89999999999999998 8899999
Q ss_pred HHHHHHHHHH
Q 005444 644 YSERLMTLAG 653 (696)
Q Consensus 644 ~a~~l~~ly~ 653 (696)
+++++.++|+
T Consensus 355 ~~~~~~~~~~ 364 (364)
T cd03814 355 FLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhC
Confidence 9999999873
No 40
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.4e-35 Score=333.18 Aligned_cols=293 Identities=18% Similarity=0.236 Sum_probs=232.7
Q ss_pred CCCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCC----CCCCccHhhhhhh-hhccchhhhhHHhhhcCCEE
Q 005444 290 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKY----PDSDIYWKKFDEK-YHFSCQFTADLIAMNNADFI 363 (696)
Q Consensus 290 ~~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~----~~s~~~~~~~~~~-y~~~~~~~~e~~a~~~AD~I 363 (696)
-.++|+||+|... .++++.++++..|+|+|+|.|+...... .........+... .++. ...+..+++.||.|
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~I 248 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRI 248 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEE
Confidence 3578999999754 4678888899999999999998632110 0000000000010 1111 12356788999999
Q ss_pred EeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc
Q 005444 364 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 443 (696)
Q Consensus 364 It~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~ 443 (696)
+++|....+..+ ..|. ...|+.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~--------------------~~g~--~~~ki~vIpNgid~~~f~~~~~~------------------- 287 (475)
T cd03813 249 TTLYEGNRERQI--------------------EDGA--DPEKIRVIPNGIDPERFAPARRA------------------- 287 (475)
T ss_pred EecCHHHHHHHH--------------------HcCC--CHHHeEEeCCCcCHHHcCCcccc-------------------
Confidence 999987643110 1122 36799999999999888764321
Q ss_pred ccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 444 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
+ .++++++|+++||+.+.||++.+++|+..+.+..|+++|+|+|++++ +.++.+++++++++++
T Consensus 288 ------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~ 351 (475)
T cd03813 288 ------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLG 351 (475)
T ss_pred ------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhC
Confidence 0 04567899999999999999999999999988889999999999854 1245678899999999
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc------CCeEEE
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFH 597 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d------g~~G~l 597 (696)
+.++|+|+| ..++..+++ .+|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|++
T Consensus 352 l~~~V~f~G-------~~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 352 LEDNVKFTG-------FQNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCeEEEcC-------CccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 999999999 235777888 499999999999999999999999999999999999999988 679999
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++.|+++++++|.+++ +|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999997766 89999999999999999999999999999999984
No 41
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=6.4e-34 Score=306.30 Aligned_cols=282 Identities=19% Similarity=0.264 Sum_probs=218.9
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||+|...+++++.++... .++|++.+.|+..... ... . .........++.++++|.
T Consensus 77 ~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~~------~-----~~~~~~~~~~~~~~~~s~ 139 (360)
T cd04951 77 QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RLR------M-----LAYRLTDFLSDLTTNVSK 139 (360)
T ss_pred hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HHH------H-----HHHHHHhhccCceEEEcH
Confidence 349999999988877666665554 3678999999753211 000 0 011223345677777777
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
...+...+ ..++ ...++.+||||+|...|.+........ ++.
T Consensus 140 ~~~~~~~~-------------------~~~~--~~~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~ 181 (360)
T cd04951 140 EALDYFIA-------------------SKAF--NANKSFVVYNGIDTDRFRKDPARRLKI-----------------RNA 181 (360)
T ss_pred HHHHHHHh-------------------ccCC--CcccEEEEccccchhhcCcchHHHHHH-----------------HHH
Confidence 65442111 1112 257899999999988776654322211 123
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
+++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+.+.+.++++++.++|
T Consensus 182 ~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v 247 (360)
T cd04951 182 LGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRV 247 (360)
T ss_pred cCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcE
Confidence 454 5678899999999999999999999999988778999999999987 56788888889999999
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHH
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAE 608 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~ 608 (696)
.|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|++++++
T Consensus 248 ~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~ 318 (360)
T cd04951 248 KLLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALAN 318 (360)
T ss_pred EEeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHH
Confidence 999943 367888885 99999999999999999999999999999999999999976 899999999999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|.++++ .+++.++.++.+ ++.+.++|||+.++++|.++|+
T Consensus 319 ~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 319 KIDEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 9987762 567777777776 8888899999999999999985
No 42
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=1e-33 Score=303.82 Aligned_cols=358 Identities=16% Similarity=0.182 Sum_probs=251.3
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++|++.. |..||.+.++. +|+++|.+.||+|. +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998642 34799999999 66667799999998 766543221111000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc---hHHH---HHHhhcCCCcE
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---NLVA---SLLAYKMGITQ 318 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~---~l~a---~lla~~~gip~ 318 (696)
...... .. .... ....+.+.+. ..+||+||++.+.+ ...+ ....+..++|+
T Consensus 52 ~~~~~~-~~--------------~~~~-----~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVI-VL--------------DNPL-----DYRRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeee-ec--------------CCch-----hHHHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 000000 00 0000 0112222333 34899999887432 1222 22234589999
Q ss_pred EEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecc
Q 005444 319 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 398 (696)
Q Consensus 319 v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~g 398 (696)
|++.|+.... .. .+. ........++.+|.|+++|..... +..
T Consensus 109 i~~~h~~~~~----~~-~~~----------~~~~~~~~~~~~d~ii~~s~~~~~---~~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLH----EP-RPG----------DRALLRLLLRRADAVIVMSSELLR---ALL-------------------- 150 (366)
T ss_pred EEEEecCCcc----cc-chh----------hhHHHHHHHhcCCEEEEeeHHHHH---HHH--------------------
Confidence 9999986110 00 000 011234567899999999733222 110
Q ss_pred cccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHH
Q 005444 399 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 478 (696)
Q Consensus 399 i~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea 478 (696)
...+..++.+||||+|...+.+...... ... ..++++|+++|++.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLKA----------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhHh----------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0111469999999999876655332100 111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC
Q 005444 479 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 558 (696)
Q Consensus 479 ~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 558 (696)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~-------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE-------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh-------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 999988788999999999865110 001111145788899999999982 3778899999995 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHH
Q 005444 559 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 636 (696)
Q Consensus 559 ~~E--~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~ 636 (696)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77777888999999999999999997776 899999999999999996
Q ss_pred HhCCHHHHHHHHHHHHH
Q 005444 637 ERYTWKIYSERLMTLAG 653 (696)
Q Consensus 637 ~~ysw~~~a~~l~~ly~ 653 (696)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 5 999999999999873
No 43
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.9e-34 Score=310.82 Aligned_cols=345 Identities=14% Similarity=0.166 Sum_probs=247.8
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++.. ..||.+.++. +++++|++.||+|+ +++...... ...... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH----HH
Confidence 578887643 3599999999 55556688999999 887553221 011011 11
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcE-EEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~-v~t~H 323 (696)
.++.+++++.... ....+...+.+.+. ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK---------------NPLKYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc---------------cHHHHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456665543221 11122223333222 45999999999887667777777777775 56677
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
........... .... ...+....+.+|.++++|....+.... . ...
T Consensus 113 ~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~~i~~s~~~~~~~~~------------------~-----~~~ 158 (358)
T cd03812 113 NTSDSHDKKKK----ILKY-------KVLRKLINRLATDYLACSEEAGKWLFG------------------K-----VKN 158 (358)
T ss_pred cccccccccch----hhHH-------HHHHHHHHhcCCEEEEcCHHHHHHHHh------------------C-----CCc
Confidence 65332211110 0000 122445788899999999886552111 0 125
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.|.+........ ...+. .+++++|+|+||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 7899999999998876653322111 11232 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. ||++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999876 5678888889999999999994 3468888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+..+.++..+....
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGL 346 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccc
Confidence 9999999999999999999999999988 5677777778999999997776 89999998888877655
No 44
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=5e-34 Score=303.93 Aligned_cols=363 Identities=17% Similarity=0.187 Sum_probs=264.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++.+-.. .||.+.++. .|++.|.+.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777765433 389999999 66677789999998 7765422211 11111 1
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhc-CCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H 323 (696)
.++.+..++.... +... .+...+.+.+. +.+||+||++...+...+.+.+.. .+++++.+.|
T Consensus 50 ~~i~v~~~~~~~~-------------~~~~-~~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG-------------RPDP-GALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc-------------cccH-HHHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2456665554321 0111 12223333333 349999999987776666666665 6889999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
....... .|. ...+ ........+.+|.++++|....+.... .++ ..
T Consensus 113 ~~~~~~~-----~~~--~~~~-----~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~--~~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLV-----ARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGY--PP 158 (365)
T ss_pred CCccccc-----chh--HhHH-----HHHHHHhccccCeEEeccHHHHHHHHH--------------------cCC--Ch
Confidence 8654321 111 1111 112345667889989999876542111 022 25
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.++|||+|...|.+........ ++.+++ ++++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 6899999999988776654332211 122555 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
+..++++|+|+|.+.. ......... ++++.++|.|.|. .+++..+++. +|++++||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGE------RSDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEccc------cccHHHHHHh-CCEEEeCCcccc
Confidence 7788999999999876 334444554 7889999999983 2467888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999997776 799999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 005444 643 IYSERLMTLAG 653 (696)
Q Consensus 643 ~~a~~l~~ly~ 653 (696)
..++++.++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 45
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.6e-34 Score=314.66 Aligned_cols=268 Identities=18% Similarity=0.239 Sum_probs=203.3
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCc--EEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGIT--QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip--~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
+.+||+||+|.......+.++++..++| ++.+.|...... . .+ ....+..+|.++++|
T Consensus 82 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~--------~----~~--------~~~~~~~~d~~i~~S 141 (359)
T PRK09922 82 ETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK--------K----HA--------ECKKITCADYHLAIS 141 (359)
T ss_pred hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc--------c----hh--------hhhhhhcCCEEEEcC
Confidence 3599999999876666667777766655 455555321100 0 00 001236899999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
....+... ..|++ ..++.+||||+|.+.+.....
T Consensus 142 ~~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------ 175 (359)
T PRK09922 142 SGIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------ 175 (359)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc------------------------
Confidence 87654211 11333 568999999999654432110
Q ss_pred ccCCCCCCCCCEEEEEcccc--ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 448 HVGTLSDRSKPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~--~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
..+++++|+++||+. +.||++.+++++.++. ++++|+|+|+|++ .+.++++++++++.
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~------------~~~l~~~~~~~~l~ 235 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD------------FEKCKAYSRELGIE 235 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc------------HHHHHHHHHHcCCC
Confidence 023567899999996 4699999999998774 3799999999987 67789999999999
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCCcchhhccCCeEEEECCCCHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
++|.|+|++.+ +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+ .||+.|+|.++.+|++++++|++
T Consensus 236 ~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 236 QRIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred CeEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999996543 34678888885 9999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++++|.+++ +|++.+ +.++......+|+-+.+.+++.++|.
T Consensus 313 ~la~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 313 EFVGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999998776 788744 12333334477888888888888875
No 46
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=1.1e-33 Score=302.77 Aligned_cols=369 Identities=19% Similarity=0.301 Sum_probs=263.1
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++...+ |..||...++. .++++|.++||+|+ ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6888987654 56799999999 67777899999999 8886644321110 00
Q ss_pred CceEEEEecccCcccccccccccCC-CcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~-i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~ 322 (696)
......+.+... ..+.. .+. +...+...+. ..+||+||+|.+.. +..+..++++.++|++.+.
T Consensus 51 ~~~~~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~ 115 (374)
T cd03817 51 VVVRPFRVPTFK--------YPDFRLPLP----IPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATY 115 (374)
T ss_pred ccccccccccch--------hhhhhcccc----HHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEe
Confidence 011111111110 01111 111 1111222122 45899999988654 4567778888999999999
Q ss_pred cCCCccCCCCCCccHhhhhhhhhccchh-hhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 323 HALEKTKYPDSDIYWKKFDEKYHFSCQF-TADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 323 H~l~~~~~~~s~~~~~~~~~~y~~~~~~-~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
|+............ ......... ..+...++.+|.+++.|....+..+ ++ +.
T Consensus 116 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~----~~----------------~~-- 168 (374)
T cd03817 116 HTMYEDYTHYVPLG-----RLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLR----EY----------------GV-- 168 (374)
T ss_pred cCCHHHHHHHHhcc-----cchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHH----hc----------------CC--
Confidence 98643110000000 000000000 2355678899999999987554211 11 11
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
..++.++|||+|...+.+......+ +.++. ++++++|+++|++.+.||++.+++++.+
T Consensus 169 -~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~ 226 (374)
T cd03817 169 -KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFAR 226 (374)
T ss_pred -CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHH
Confidence 3468999999999887765432221 11333 5567899999999999999999999999
Q ss_pred hhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCC
Q 005444 482 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 561 (696)
Q Consensus 482 l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 561 (696)
+.+..++++|+++|+++. .+.++++++++++.++|.|+| .++.+++..+++. +|++++||..|
T Consensus 227 ~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e 289 (374)
T cd03817 227 LLKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTE 289 (374)
T ss_pred HHHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEeccccc
Confidence 987778999999999876 567888888999999999999 6778899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCH
Q 005444 562 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 641 (696)
Q Consensus 562 ~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw 641 (696)
++|++++|||+||+|||+|+.|+..|++.++.+|+++++++. +++++|.+++ +|++.+++|++++++.+.+ ++
T Consensus 290 ~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~-~~- 362 (374)
T cd03817 290 TQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEK-FS- 362 (374)
T ss_pred CcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH-HH-
Confidence 999999999999999999999999999999999999998887 8888886665 8999999999999999854 44
Q ss_pred HHHHHHHHHHHH
Q 005444 642 KIYSERLMTLAG 653 (696)
Q Consensus 642 ~~~a~~l~~ly~ 653 (696)
.++++.++|+
T Consensus 363 --~~~~~~~~~~ 372 (374)
T cd03817 363 --FAKKVEKLYE 372 (374)
T ss_pred --HHHHHHHHHh
Confidence 5666666664
No 47
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=1.7e-33 Score=312.81 Aligned_cols=392 Identities=14% Similarity=0.077 Sum_probs=255.9
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 241 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i 241 (696)
.-.||++++.-. +|.+..+. +++++|+++||+|+ |++...+.. .+..
T Consensus 2 ~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~~ 48 (415)
T cd03816 2 KRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDEI 48 (415)
T ss_pred CccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHHH
Confidence 346788887622 35555667 56777899999999 887653211 0111
Q ss_pred cCCCceEEEEecccC-cccccccccccCCCcccHHHHHHHHHHHHHHH-hCCCCeEEEEeCCCc---hHHHHHHhhcCCC
Q 005444 242 SGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTEDVGSEITAE-LQGFPDFIIGNYSDG---NLVASLLAYKMGI 316 (696)
Q Consensus 242 ~~~~~v~I~rvp~~~-~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~-~~~~pDvIh~h~~~~---~l~a~lla~~~gi 316 (696)
....++.+++++... ..+. ......+.......+.+.+... ...+||+||+|.+.. ...+.++++..++
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~ 122 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRT 122 (415)
T ss_pred hcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCC
Confidence 122367888776653 1110 0001111111111111211111 135899999987554 3456666777899
Q ss_pred cEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceee
Q 005444 317 TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 396 (696)
Q Consensus 317 p~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~ 396 (696)
|+|++.|+.+..... .... .......+. ...+...++.+|.||++|+...+...+
T Consensus 123 ~~V~~~h~~~~~~~~-~~~~--~~~~~~~~~--~~~e~~~~~~ad~ii~vS~~~~~~l~~-------------------- 177 (415)
T cd03816 123 KLIIDWHNYGYTILA-LKLG--ENHPLVRLA--KWYEKLFGRLADYNLCVTKAMKEDLQQ-------------------- 177 (415)
T ss_pred eEEEEcCCchHHHHh-cccC--CCCHHHHHH--HHHHHHHhhcCCEeeecCHHHHHHHHh--------------------
Confidence 999999986421110 0000 000001111 123667889999999999987652211
Q ss_pred cccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc-ccccccCCCCCCCCCEEEEEccccccCChHHH
Q 005444 397 HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE-QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 475 (696)
Q Consensus 397 ~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~-~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L 475 (696)
.| ....|+.|||||. ...|.|........... . ...-+.+. ......+. .+++..+++++||+.+.||++.|
T Consensus 178 ~~--~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~-~~~~~~vi~~~grl~~~K~~~~l 250 (415)
T cd03816 178 FN--NWKIRATVLYDRP-PEQFRPLPLEEKHELFL-K--LAKTFLTRELRIGAVQL-SEERPALLVSSTSWTPDEDFGIL 250 (415)
T ss_pred hh--ccCCCeeecCCCC-HHHceeCcHHHHHHHHH-h--cccccccccccccccee-cCCCceEEEEeccccCCCCHHHH
Confidence 12 2378999999995 45677754322111000 0 00000000 00000122 13445678889999999999999
Q ss_pred HHHHHHhhc------cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHc
Q 005444 476 VECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 549 (696)
Q Consensus 476 lea~~~l~~------~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~ 549 (696)
++|+..+.+ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+|+
T Consensus 251 i~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~- 313 (415)
T cd03816 251 LDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLA- 313 (415)
T ss_pred HHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHH-
Confidence 999999864 247899999999987 678999999999976555556 677899999999
Q ss_pred cccEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcC---HHH
Q 005444 550 TKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN---PSH 623 (696)
Q Consensus 550 aadvfV~PS---~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~d---p~~ 623 (696)
++|++|.|+ ..|+||++++|||+||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |+.
T Consensus 314 ~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~ 387 (415)
T cd03816 314 SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGK 387 (415)
T ss_pred hCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHH
Confidence 499999753 35789999999999999999999999999999999999994 8999999997776 77 999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 624 WKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 624 ~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
+++|+++|++.. .++|..-.++.+
T Consensus 388 ~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 388 LNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999886 677876665543
No 48
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=8.1e-34 Score=314.26 Aligned_cols=369 Identities=14% Similarity=0.135 Sum_probs=242.5
Q ss_pred ceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcC-CCccceeEEEeCCCCCCCC-------Cc
Q 005444 162 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKG-------TT 233 (696)
Q Consensus 162 ~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G-~eV~~~ilV~T~~~~~~~g-------~~ 233 (696)
+-|||+|++..+. |..+|..+.++ .++..|+++| |+|+ |+.+..+.... ..
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3589999998766 67899999999 6777889999 7999 99887653211 00
Q ss_pred cccce--e-eecCCCceEEEEecccCcccccccccc--cCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHH-
Q 005444 234 CNQRL--E-RVSGTEHTHILRVPFRSEKGILRQWIS--RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV- 306 (696)
Q Consensus 234 ~~~~~--e-~i~~~~~v~I~rvp~~~~~~~~~~wis--r~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~- 306 (696)
+.... + .+....+.+|.|+|..+.. +.+.+++ +..++| ..++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p-~yp~r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIK-FYPGKFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccc-cCcccccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 11010 0 0100011244455433221 0111010 011111 1234444443 4999999999875 554
Q ss_pred -HHHHhhcCCCcEEEEecCCCccCCCC-CCc-cHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccc
Q 005444 307 -ASLLAYKMGITQCTIAHALEKTKYPD-SDI-YWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYES 383 (696)
Q Consensus 307 -a~lla~~~gip~v~t~H~l~~~~~~~-s~~-~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~ 383 (696)
|..+++++++ +|.+.|+... .|.. ... ....+ ...+... ...-..+|.+++.|....+
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~~--l~~~~~~----~~~r~~~d~vi~pS~~~~~----------- 193 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKAF--LLKYINS----WVVDIYCHKVIRLSAATQD----------- 193 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHHHH--HHHHHHH----HHHHHhcCEEEccCHHHHH-----------
Confidence 6677777766 8889998321 1100 000 00000 0001111 1112348999999975422
Q ss_pred cccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCC--CCEEE
Q 005444 384 HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS--KPIVF 461 (696)
Q Consensus 384 ~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~--k~iIl 461 (696)
+ .......++|||.+.|.|....... .+. .++ .+.++
T Consensus 194 --------l----------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~l 232 (462)
T PLN02846 194 --------Y----------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGAY 232 (462)
T ss_pred --------H----------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEEE
Confidence 0 1122234589999988776432110 011 122 35799
Q ss_pred EEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChh
Q 005444 462 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 541 (696)
Q Consensus 462 ~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 541 (696)
|+|||.+.||++.|+++++++.+..++++|+|+|+|++ .++++++++++++..++ |.| ....+
T Consensus 233 ~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G----~~~~~ 295 (462)
T PLN02846 233 YIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPG----RDHAD 295 (462)
T ss_pred EEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECC----CCCHH
Confidence 99999999999999999999887778999999999998 77899999999987555 777 33333
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCH
Q 005444 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENP 621 (696)
Q Consensus 542 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp 621 (696)
.+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 296 ---~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~ 365 (462)
T PLN02846 296 ---PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP 365 (462)
T ss_pred ---HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc
Confidence 3555 58999999999999999999999999999999998 59999999999995 89999999988773 233
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 622 SHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 622 ~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
..++.+++ ++|||+..+++++++|+.
T Consensus 366 ---~~~~~~a~----~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 366 ---APLTDAQR----HELSWEAATERFLRVADL 391 (462)
T ss_pred ---hhHHHHHH----HhCCHHHHHHHHHHHhcc
Confidence 22333332 599999999999999986
No 49
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.1e-33 Score=305.07 Aligned_cols=342 Identities=17% Similarity=0.218 Sum_probs=245.3
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||++++... ..||.+.++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999999 66667799999999 7764310
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcC--CCcEEEE
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 321 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~--gip~v~t 321 (696)
. +.+.+. ..+|||||+|++....+......+. ++|.|++
T Consensus 42 ---------~---------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------A---------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------h---------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 011111 3489999999876644443344444 9999999
Q ss_pred ecCCCccCCC----CCCccHh-h-----hhhhhh---ccchhh-h-hHHhhhcCCEEEeccHHHHhhccccccccccccc
Q 005444 322 AHALEKTKYP----DSDIYWK-K-----FDEKYH---FSCQFT-A-DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTA 386 (696)
Q Consensus 322 ~H~l~~~~~~----~s~~~~~-~-----~~~~y~---~~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~ 386 (696)
+|+....... .....+. . ....+. ...+.. . .......++.++++|....+..++.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9986432110 0000000 0 000000 000000 0 1111246778888887654421110
Q ss_pred ccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccc
Q 005444 387 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 466 (696)
Q Consensus 387 ~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL 466 (696)
..+...++.+||||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 154 ------------~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ------------SLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ------------cccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 11225799999999999988775443221 12444 5566778777777
Q ss_pred cc--cCChHHHHHHHHHhhcc-CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCC-hhH
Q 005444 467 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 542 (696)
Q Consensus 467 ~~--~Kgi~~Llea~~~l~~~-~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~-~~e 542 (696)
.. .||++.+++++..+.+. .+++.++++|++.. ... .++.++|.|+| .++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~------------~~~-------~~~~~~v~~~g----~~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDP------------EIP-------PDLPFPVHYLG----SLNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCch------------hhh-------ccCCCceEecC----CcCCHHH
Confidence 65 89999999999998764 57899999999865 111 14567899999 455 678
Q ss_pred HHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHH
Q 005444 543 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 622 (696)
Q Consensus 543 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~ 622 (696)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8889994 9999999999999999999999999999999999999999999999999999999999998776 7999
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 623 HWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 623 ~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.+.+|++++++.+.++|||+.++++|.++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999986
No 50
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=7e-34 Score=314.44 Aligned_cols=277 Identities=17% Similarity=0.119 Sum_probs=191.9
Q ss_pred CCCCeEEEEeCCCc---hHHH--H----HHhhcCCCcEEEEecCCCccC----CCCCCccHhhhhhh------h-----h
Q 005444 290 QGFPDFIIGNYSDG---NLVA--S----LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFDEK------Y-----H 345 (696)
Q Consensus 290 ~~~pDvIh~h~~~~---~l~a--~----lla~~~gip~v~t~H~l~~~~----~~~s~~~~~~~~~~------y-----~ 345 (696)
..+|||||.|...+ ++.. . +..+..++|+|.|.|+.+... ++..-..|+.-... | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 56999999998776 3321 1 113456799999999987442 11100111100000 0 0
Q ss_pred -----ccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCC
Q 005444 346 -----FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 420 (696)
Q Consensus 346 -----~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p 420 (696)
|......-....+.++.+|++|...++...+ .++ ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------------------~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS---------------------LYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------------------HcC--CCCEEEeCCCcCcccccc
Confidence 0000001112234578999999887653111 112 468999999999754332
Q ss_pred CchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccc--cccCChHHHHHHHHHhhccCCCeEEEEEeCcc
Q 005444 421 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 498 (696)
Q Consensus 421 ~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL--~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~ 498 (696)
...... .. .++++++|+++|+. .+.||++.|++|+.++. ++++|+|+|++.
T Consensus 229 ~~~~~~----------------------~~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VR--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------cc--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 00 03467889999994 47899999999998763 579999999875
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEE
Q 005444 499 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 578 (696)
Q Consensus 499 ~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVv 578 (696)
. . ...+|.++|+.. +..++..+|+ ++|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-----------~~~~v~~~g~~~---~~~~l~~~y~-~aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-----------TAGNVVNHGFET---DKRKLMSALN-QMDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-----------cccceEEecCcC---CHHHHHHHHH-hCCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 024688888543 3568888898 49999999999999999999999999999
Q ss_pred EcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 579 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 579 at~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~----m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|+.||++|++.++ +|++++|+|++++|+++ +++..++ +..++++++.++|||+.++++|+++|+
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999765 99999999999999854 4444443 335688888899999999999999996
No 51
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.6e-33 Score=313.72 Aligned_cols=395 Identities=17% Similarity=0.214 Sum_probs=259.5
Q ss_pred cCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccc
Q 005444 158 GRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 237 (696)
Q Consensus 158 ~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~ 237 (696)
+|....++|+++-|+.- ..||.++.+.+-|++| .++|+++. |+|+|...+.. . .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~~-~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDAS-P---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCCC-H---HHH
Confidence 44444568988876543 3479999999666665 67798654 45888663221 1 111
Q ss_pred eeeecCCCceE------EEEecccCcccccccccccCCCcccHHHHH---HHHHHHHHHHhCCCCeEEEEeCCCchHHHH
Q 005444 238 LERVSGTEHTH------ILRVPFRSEKGILRQWISRFDVWPYLETFT---EDVGSEITAELQGFPDFIIGNYSDGNLVAS 308 (696)
Q Consensus 238 ~e~i~~~~~v~------I~rvp~~~~~~~~~~wisr~~i~p~l~~f~---~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~ 308 (696)
+.....+-++. ++++. .++|++ ...||++.-+. ..+...+.......||+++-....+ ...
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~-~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~ 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIE-EETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTY 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------cccccc-cccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHH
Confidence 11111111222 22221 124664 34555532222 2222222222233666554222222 112
Q ss_pred HHhhcCCCcEEEEecCCCccC------------CCC----CCccH-hhhhhhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 309 LLAYKMGITQCTIAHALEKTK------------YPD----SDIYW-KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 309 lla~~~gip~v~t~H~l~~~~------------~~~----s~~~~-~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
.+++..++|++..+|-..... +.. ....+ ......|+.... ..+..+.+.||.|+++|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHH
Confidence 233455899999999432110 000 00001 011111111111 135567799999999999876
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~ 451 (696)
+..++.+ +. +.++.+|+||+|.+.+.+....
T Consensus 233 ~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 5432221 11 3478899999997655221100
Q ss_pred CCCCCCCEEEEEccccccCChHHHHHHHHHhhc----cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 452 l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~----~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
.++++++++++||+.+.||++.+++|++++.+ ..++++|+|+|++.. .++.++.++++++++++++.++
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCc
Confidence 02346789999999999999999999998754 246899999999854 1223456789999999999999
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcc-hhhcc---CCeEEEECCCCH
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHP 603 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~-EiI~d---g~~G~l~~p~d~ 603 (696)
|.|+| .++.+++..+|+. ++++|+||..|+||++++|||+||+|||+++.||+. |++.+ +.+|++++ |+
T Consensus 337 V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~ 409 (463)
T PLN02949 337 VEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV 409 (463)
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence 99999 6778899999995 999999999999999999999999999999999985 77765 67899985 89
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.++.
T Consensus 410 ~~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 410 EEYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 999999988762 26888999999999998 779999999999998763
No 52
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=6.9e-33 Score=294.02 Aligned_cols=356 Identities=18% Similarity=0.246 Sum_probs=258.3
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++. .||.+.++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57788764 378899998 66677789999999 8876533221 0111
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhh-cCCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~-~~gip~v~t~H 323 (696)
.++.+..+|..... .+ .+..+ .....+.+.+. ..+||+||+|...+..++.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~-~~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDL-KALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHH-HHHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24666666654310 11 11111 11122233333 45999999998777777777776 45566788888
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+....... ..... ..+ ...++..++.+|.+++.|....+...+. ...+ ..
T Consensus 113 ~~~~~~~~-~~~~~----~~~-----~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTS-GGLKR----RLY-----LLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhcc-chhHH----HHH-----HHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 75432211 11011 111 1234567888999999998876522111 1111 13
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+++||+|.+.+.+.... .+++++.|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 567788999998766543210 0456789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~-li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
+..++++|+|+|++... ..... ++.+.+..++|.|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 77789999999998761 11111 3667778889999994 3468888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+++ .|++.+.++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999997765 899999999999999999999999
Q ss_pred HHHHHHH
Q 005444 643 IYSERLM 649 (696)
Q Consensus 643 ~~a~~l~ 649 (696)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999876
No 53
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.7e-33 Score=302.08 Aligned_cols=364 Identities=20% Similarity=0.238 Sum_probs=256.8
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++............ ..
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hh--
Confidence 578888766531 5799999999 66667799999998 776553322111000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.... ... ......+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLR---------LPRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---ccc---------cccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 000 0001111111111111122222 35899999998776444 6679999999998
Q ss_pred CCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCC
Q 005444 325 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 404 (696)
Q Consensus 325 l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~ 404 (696)
+.....+...... .... ........++.+|.++++|....+...+. . +....
T Consensus 113 ~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~--~~~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FRRY-----FRRLLRRALRRADAIITVSEATKRDLLRY-------------------L--GVPPD 164 (365)
T ss_pred chhhhCcccCCHH--HHHH-----HHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------h--CcCHH
Confidence 7554433221111 0000 11234567899999999998766532111 1 11256
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc
Q 005444 405 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 484 (696)
Q Consensus 405 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~ 484 (696)
++.++|||+|...+.+..... +.. ... .+++++|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998776654322 100 111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCc
Q 005444 485 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 564 (696)
Q Consensus 485 ~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 564 (696)
..++++|+++|.+... .......+++.++.++|.|+| .++.+++..+++. +|+++.||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 112223336778899999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHH
Q 005444 565 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 644 (696)
Q Consensus 565 ltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~ 644 (696)
++++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+++ .|++.+.++++++++.+ ++|||+..
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 4799999999999999997765 89999999999999665 88999999
Q ss_pred HHHHH
Q 005444 645 SERLM 649 (696)
Q Consensus 645 a~~l~ 649 (696)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99886
No 54
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=7.3e-33 Score=308.00 Aligned_cols=366 Identities=18% Similarity=0.228 Sum_probs=243.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHc--CCCccceeEEEeCCCCCCCCCcc---ccceeeecCCCceEEEEec-ccCccc
Q 005444 186 TGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTC---NQRLERVSGTEHTHILRVP-FRSEKG 259 (696)
Q Consensus 186 tGG~~vyv~~~~raL~~~L~~~L~~~--G~eV~~~ilV~T~~~~~~~g~~~---~~~~e~i~~~~~v~I~rvp-~~~~~~ 259 (696)
.||.++.+.+.|++| .++ ||+|+ |+|........... .... .+.-..++.++++. .+
T Consensus 13 ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~~~~~~~~~~~~~~~~~---- 75 (419)
T cd03806 13 GGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-NIELDRPRIVFFLLKYR---- 75 (419)
T ss_pred CCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-CeecCCCceEEEEecce----
Confidence 469999999777765 445 78888 99988544220000 0011 01111234545443 11
Q ss_pred ccccccccCCCcccH---HHHHHHHHHHHHHHhCCCCeEEEEeCCCc--hHHHHHHhhcCCCcEEEEecCCCccCCCCCC
Q 005444 260 ILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIAHALEKTKYPDSD 334 (696)
Q Consensus 260 ~~~~wisr~~i~p~l---~~f~~~~~~~i~~~~~~~pDvIh~h~~~~--~l~a~lla~~~gip~v~t~H~l~~~~~~~s~ 334 (696)
.|+++ ..|+.+ -.+...+...+......+||||+.+...+ ..++.++ .++|++..+| ++.--.+..
T Consensus 76 ---~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~---~~~~~i~y~h--~P~~~~d~l 146 (419)
T cd03806 76 ---KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLL---GGCPVGAYVH--YPTISTDML 146 (419)
T ss_pred ---eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHh---cCCeEEEEec--CCcchHHHH
Confidence 12322 233332 23333333333333345899998876443 2222222 3789999999 221000000
Q ss_pred --c----------------cH-hhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhccccccccccccccccccccee
Q 005444 335 --I----------------YW-KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 395 (696)
Q Consensus 335 --~----------------~~-~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~ 395 (696)
. .. ......|+ ......+.+.++.||.|+++|....+..++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~-~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~----------------- 208 (419)
T cd03806 147 QKVRSREASYNNSATIARSPVLSKAKLLYY-RLFAFLYGLAGSFADVVMVNSTWTRNHIRSLW----------------- 208 (419)
T ss_pred HHHhhccccccCccchhccchHHHHHHHHH-HHHHHHHHHHhhcCCEEEECCHHHHHHHHHHh-----------------
Confidence 0 00 00000010 00112567789999999999988765322211
Q ss_pred ecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHH
Q 005444 396 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 475 (696)
Q Consensus 396 ~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~L 475 (696)
+ ...++.||+||+|.+.|.+.... ...++++|+|+||+.+.||++.+
T Consensus 209 ----~-~~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il~vgr~~~~K~~~~l 255 (419)
T cd03806 209 ----K-RNTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQILSIAQFRPEKNHPLQ 255 (419)
T ss_pred ----C-cCCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEEEEEEeecCCCCHHHH
Confidence 1 02488999999998776543210 03456799999999999999999
Q ss_pred HHHHHHhhccCC-----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcc
Q 005444 476 VECYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT 550 (696)
Q Consensus 476 lea~~~l~~~~~-----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a 550 (696)
++|+.++.+..+ +++|+|+|++.. .++.++.+.++++++++++.++|.|+| .++.+++..+|+.
T Consensus 256 i~A~~~l~~~~~~~~~~~~~lvivG~~~~------~~~~~~~~~L~~~~~~l~l~~~V~f~g----~v~~~~l~~~l~~- 324 (419)
T cd03806 256 LRAFAKLLKRLPEEIKEKIKLVLIGSCRN------EDDEKRVEDLKLLAKELGLEDKVEFVV----NAPFEELLEELST- 324 (419)
T ss_pred HHHHHHHHHhCcccccCceEEEEEcCCCC------cccHHHHHHHHHHHHHhCCCCeEEEec----CCCHHHHHHHHHh-
Confidence 999999987554 499999999764 122345778999999999999999999 7888999999995
Q ss_pred ccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc-chhhc---cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHH-HHH
Q 005444 551 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE---HGASGFHIDPYHPDQAAELMADFFGKCKENPS-HWK 625 (696)
Q Consensus 551 advfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~-~EiI~---dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~-~~~ 625 (696)
+|++|+||..|+||++++|||+||+|||+++.||+ .|++. ++.+|++++ |++++|++|.+++ ++++ .++
T Consensus 325 adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll----~~~~~~~~ 398 (419)
T cd03806 325 ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL----SLSEEERL 398 (419)
T ss_pred CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH----hCCHHHHH
Confidence 99999999999999999999999999999999886 57777 799999985 9999999998877 5554 455
Q ss_pred HHHHHHHHHHHHhCCHHHHHH
Q 005444 626 KISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 626 ~m~~~a~~~v~~~ysw~~~a~ 646 (696)
.+ .++++.+.++|||+.+.+
T Consensus 399 ~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 399 RI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HH-HHHHHHHHHhhCHHHhcc
Confidence 55 555556779999998754
No 55
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=7e-33 Score=292.67 Aligned_cols=345 Identities=16% Similarity=0.223 Sum_probs=251.2
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++++..+ .||.+.++. +|+++|+++||+|. +++..... .. .. ...
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~--~~----~~---~~~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGE--PP----FY---ELD 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCC--CC----cc---ccC
Confidence 68888876542 589999999 66667788999999 88766433 00 00 011
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCC-CcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG-ITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~g-ip~v~t~H 323 (696)
.++.+..++...... +.. .+ .+...+.+.+. ..+||+||++.+.. ...+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~~---~~----~~~~~~~~~l~---~~~~d~i~~~~~~~--~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LLA---RF----KKLRRLRKLLK---NNKPDVVISFLTSL--LTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hhc---cc----cchHHHHHhhc---ccCCCEEEEcCchH--HHHHHHHhhccccEEEecC
Confidence 234555554432110 000 00 11112223232 35999999998772 2222233344 48999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+....... ...+ ...+...++.+|.+++.|...... ......
T Consensus 114 ~~~~~~~~--~~~~------------~~~~~~~~~~~d~ii~~s~~~~~~------------------------~~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRR------------LLLRRLLYRRADAVVVLTEEDRAL------------------------YYKKFN 155 (348)
T ss_pred CCccchhh--hhHH------------HHHHHHHHhcCCEEEEeCHHHHHH------------------------hhccCC
Confidence 75321100 0000 002456789999999999876310 011225
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 789999999998755432 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+..++++|+|+|++.+ ...+.++++++++.++|.|.|. .+++..+++. +|++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8789999999999877 5667778899999999999993 4678899995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCC-CcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHH
Q 005444 564 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 642 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~g-G~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~ 642 (696)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ .||+.+++|++++++.+ ++|||+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999865 5677777777999999999999999998776 89999999999996655 899999
Q ss_pred HHHHHHH
Q 005444 643 IYSERLM 649 (696)
Q Consensus 643 ~~a~~l~ 649 (696)
.++++|.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
No 56
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=2.6e-32 Score=290.64 Aligned_cols=362 Identities=23% Similarity=0.325 Sum_probs=264.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccccccccc
Q 005444 186 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 265 (696)
Q Consensus 186 tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wi 265 (696)
.||...++. .+++.|.++||+|+ +++................ . .......... .+.
T Consensus 13 ~~g~~~~~~--------~~~~~l~~~g~~v~----v~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~-----~~~ 68 (377)
T cd03798 13 NGGGGIFVK--------ELARALAKRGVEVT----VLAPGPWGPKLLDLLKGRL--V-----GVERLPVLLP-----VVP 68 (377)
T ss_pred CchHHHHHH--------HHHHHHHHCCCceE----EEecCCCCCCchhhccccc--c-----cccccccCcc-----hhh
Confidence 589999999 66777789999999 8876643321110000000 0 0000000000 000
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhh
Q 005444 266 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 344 (696)
Q Consensus 266 sr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y 344 (696)
... .......+...+.+.+.. ...+||+||+|+... ...+..+++..++|++.+.|+..........
T Consensus 69 ~~~-~~~~~~~~~~~~~~~l~~-~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------- 136 (377)
T cd03798 69 LLK-GPLLYLLAARALLKLLKL-KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------- 136 (377)
T ss_pred ccc-cchhHHHHHHHHHHHHhc-ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh----------
Confidence 000 111112233333333331 156999999997654 5667777888899999999986543322111
Q ss_pred hccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchH
Q 005444 345 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 424 (696)
Q Consensus 345 ~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~ 424 (696)
.........++.+|.+++.|....+..++. + .+..++.++|||+|...+.+....
T Consensus 137 ---~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~ 191 (377)
T cd03798 137 ---LLRALLRRALRRADAVIAVSEALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRA 191 (377)
T ss_pred ---hHHHHHHHHHhcCCeEEeCCHHHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchH
Confidence 011223457889999999998876522110 1 236789999999999888765432
Q ss_pred HHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCc
Q 005444 425 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 504 (696)
Q Consensus 425 ~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~ 504 (696)
.. . ..+. ..+++.|+++|++.+.||++.+++++..+.+..++++|+|+|.+..
T Consensus 192 ~~--~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~----- 244 (377)
T cd03798 192 EA--R------------------KLGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL----- 244 (377)
T ss_pred HH--H------------------hccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----
Confidence 21 0 0122 4567899999999999999999999999987778999999999876
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC
Q 005444 505 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 584 (696)
Q Consensus 505 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG 584 (696)
.+.+.+.++++++.++|.+.| .++.+++..+++. ||++++|+..|++|++++|||+||+|||+++.|+
T Consensus 245 -------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~ 312 (377)
T cd03798 245 -------REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG 312 (377)
T ss_pred -------hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCC
Confidence 566778888889999999999 7778999999995 9999999999999999999999999999999999
Q ss_pred cchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 585 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 585 ~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
..+++.++.+|++++++|+++++++|.+++ .+++. +++.++++.+.++|||+..++++.++|+
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 313 IPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred hHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 999999999999999999999999998776 78776 7888999999999999999999999875
No 57
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=1.6e-32 Score=292.95 Aligned_cols=354 Identities=16% Similarity=0.188 Sum_probs=245.5
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||++++++..| ..+||.+.++. .|+++|+++||+|. +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999876654 24699999999 56666789999999 887653322111000
Q ss_pred CceEEEEecc--cCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEE
Q 005444 245 EHTHILRVPF--RSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTI 321 (696)
Q Consensus 245 ~~v~I~rvp~--~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t 321 (696)
.+..+...+. .........+......+ ...+...+.+.+. ..+||+||+|.+.. .......++..++|++++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~ 126 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPRDLFHLSDYD--NPAVVAEFARLLE---DFRPDVVHFHHLQGLGVSILRAARDRGIPIVLT 126 (359)
T ss_pred ccceeeccccccccCCCchhhhhHHHhcc--CHHHHHHHHHHHH---HcCCCEEEECCccchHHHHHHHHHhcCCCEEEE
Confidence 0111111110 00000000000000000 0111222223332 34899999998754 334445567788999999
Q ss_pred ecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeeccccc
Q 005444 322 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 401 (696)
Q Consensus 322 ~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~ 401 (696)
.|+.+.... +. .......|.++++|....+..++. +..
T Consensus 127 ~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~- 164 (359)
T cd03823 127 LHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF- 164 (359)
T ss_pred Eeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHHc--------------------CCC-
Confidence 997532110 00 011223399999998765422110 111
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHH
Q 005444 402 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 481 (696)
Q Consensus 402 ~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~ 481 (696)
..++.+||||+|...+.+... + .+.++++|+++|++.+.||++.+++++.+
T Consensus 165 -~~~~~vi~n~~~~~~~~~~~~--------------------------~--~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 215 (359)
T cd03823 165 -AEKISVIRNGIDLDRAKRPRR--------------------------A--PPGGRLRFGFIGQLTPHKGVDLLLEAFKR 215 (359)
T ss_pred -ccceEEecCCcChhhcccccc--------------------------C--CCCCceEEEEEecCccccCHHHHHHHHHH
Confidence 468999999999887654321 0 14567889999999999999999999999
Q ss_pred hhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC-C
Q 005444 482 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-Y 560 (696)
Q Consensus 482 l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~ 560 (696)
+.+ ++++|+++|++.. ........ +..++|.++| .++.+++..+++. +|++++||. .
T Consensus 216 l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~ 273 (359)
T cd03823 216 LPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWP 273 (359)
T ss_pred HHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCccc
Confidence 876 7899999999876 11111111 5667899999 6778999999995 999999997 7
Q ss_pred CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCC
Q 005444 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640 (696)
Q Consensus 561 E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ys 640 (696)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.++++++++++...
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~---- 345 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRS---- 345 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhh----
Confidence 999999999999999999999999999999999999999999999999997776 799999999999987763
Q ss_pred HHHHHHHHHHHHH
Q 005444 641 WKIYSERLMTLAG 653 (696)
Q Consensus 641 w~~~a~~l~~ly~ 653 (696)
++.++++++++|+
T Consensus 346 ~~~~~~~~~~~~~ 358 (359)
T cd03823 346 IEDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHHhh
Confidence 3899999999875
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=2.7e-33 Score=309.24 Aligned_cols=282 Identities=14% Similarity=0.141 Sum_probs=205.3
Q ss_pred CCCCeEEEEeCCCchHHHHHHh-hcCCCcEEEEecCCCccCCCC---C-CccHhhhhhhhhcc--chhhhhHHhhhcCCE
Q 005444 290 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPD---S-DIYWKKFDEKYHFS--CQFTADLIAMNNADF 362 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla-~~~gip~v~t~H~l~~~~~~~---s-~~~~~~~~~~y~~~--~~~~~e~~a~~~AD~ 362 (696)
..++|+||++.+..+. .+. +..++|.|++.|+.+...+.. . ....+ ..|+.. .....|+..++.+|.
T Consensus 102 ~~~~D~v~~~~~~~~~---~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~ad~ 175 (397)
T TIGR03087 102 AEPVDAIVVFSSAMAQ---YVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLR---WIYRREGRLLLAYERAIAARFDA 175 (397)
T ss_pred hCCCCEEEEeccccce---eccccccCCCeEeehhhHHHHHHHHHHhccCcchh---HHHHHHHHHHHHHHHHHHhhCCe
Confidence 4589999998754322 222 346899999999864322110 0 00000 011110 011246778899999
Q ss_pred EEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCc
Q 005444 363 IITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 442 (696)
Q Consensus 363 IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~ 442 (696)
|+++|+.+.+..++. . .....++.+||||+|.+.|.|.....
T Consensus 176 vi~~S~~~~~~l~~~-------------------~--~~~~~~v~vipngvd~~~f~~~~~~~----------------- 217 (397)
T TIGR03087 176 ATFVSRAEAELFRRL-------------------A--PEAAGRITAFPNGVDADFFSPDRDYP----------------- 217 (397)
T ss_pred EEEcCHHHHHHHHHh-------------------C--CCCCCCeEEeecccchhhcCCCcccc-----------------
Confidence 999999876532211 0 11246899999999998886643210
Q ss_pred cccccccCCCCCCCCCEEEEEccccccCChHHHH----HHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 443 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 443 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Ll----ea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
... .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +.+
T Consensus 218 ------~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~~--- 273 (397)
T TIGR03087 218 ------NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PAV--- 273 (397)
T ss_pred ------CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HHH---
Confidence 001 34567999999999999999988 56666766678999999999865 122
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEE
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l 597 (696)
++++..++|+|+|+ ++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+++|++
T Consensus 274 -~~l~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~l 344 (397)
T TIGR03087 274 -RALAALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELL 344 (397)
T ss_pred -HHhccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceE
Confidence 33344567999994 33 57888885 999999997 69999999999999999999997643 33444568999
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++ +|+++++++|.+++ +|++.+++|+++|++++.++|||+..++++.++++
T Consensus 345 v~-~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 345 VA-ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred eC-CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 86 89999999997766 89999999999999999999999999999999875
No 59
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=4.5e-32 Score=286.62 Aligned_cols=351 Identities=18% Similarity=0.220 Sum_probs=249.2
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCC
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 244 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~ 244 (696)
||+++++... .||...++. .|+++|.++||+|. +++............. ..
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~~------~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLPS------NV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCcccccccc------ch
Confidence 5788876543 489999999 66667789999999 8776533221110000 00
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCC-CchHHHHHHhhcCCCcEEEEec
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~-~~~l~a~lla~~~gip~v~t~H 323 (696)
........... .... ..+...+.+.+. ..+||+||++.. ...+++.+..+. ++|.+++.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRD----LLAILRLRRLLR---KEKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccc----hhHHHHHHHHHH---hcCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000000000 0001 112222333333 238999999988 555555555444 899999999
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+............+ ......++.+|.+++.|....+...+. .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcC--Cc
Confidence 87543321111000 224567889999999998765421111 111 25
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 483 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~ 483 (696)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765433211 0122 467789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCC
Q 005444 484 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 563 (696)
Q Consensus 484 ~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 563 (696)
+..++++|+|+|++.. .+.+.+.++++++.++|.|.|.. +++..+++. +|++|+||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999876 56677889999999999999942 357788885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCC
Q 005444 564 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 640 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ys 640 (696)
|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996444433 46678999999999989988888886
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=2.7e-32 Score=308.33 Aligned_cols=279 Identities=19% Similarity=0.241 Sum_probs=211.6
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCC--CccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s--~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
..++||+|++.+.....+ ++.....+|.+.++|+......... ...|. ..|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999876653333 4456668999999997432221111 11122 11211 112467789999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
+...+.+.+..++| ....+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~------------------~~~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY------------------YNIEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh------------------cCCCCcEEEEcCCCcccccCccc-------------------------
Confidence 87655333332222 11256899999998755433210
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
..++..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2334679999999999999999999999988889999999999976 5789999999999999
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC-CcchhhccCCeEEEECC----CC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDP----YH 602 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g-G~~EiI~dg~~G~l~~p----~d 602 (696)
|.|+|. .+ +..+++ .+|+||+||.+|+||++++||||||+|||+|+++ |++|+|.+|.+|+++++ .|
T Consensus 378 V~f~G~----~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGH----RN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCC----CC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 999993 33 455666 5999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 603 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 603 ----~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++++|++|.+++ . ++.+++|+++|++.+ ++|||+.++++|.++++
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVR 498 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 777888886654 4 557899999999976 88999999999999875
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=100.00 E-value=1.4e-31 Score=296.78 Aligned_cols=276 Identities=15% Similarity=0.239 Sum_probs=219.1
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCc-EEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEecc
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 367 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip-~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 367 (696)
..++|++|+++... +..+.++.++.+.+ +|.++|+..... ......+. ......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999866554 44555667777766 899999753211 00011111 11234578999999999
Q ss_pred HHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 368 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 368 ~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
....+..++. ++....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~---------------------~~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKR---------------------YPAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHH---------------------CCCccccEEEEECCcccccccCCC-------------------------
Confidence 9876633222 122266899999999986554320
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC--CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~--~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
..++++.|+++||+.+.||++.+++|+.++.+.+| +++++++|+|+. .+.+++++++++..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 03456789999999999999999999999987765 567788999876 56788888888888
Q ss_pred CcEEEeccccccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCC-CH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 603 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~-d~ 603 (696)
++|.|+| .++.+++..+++. .+|+||.||.+||||++++|||+||+|||+|++||..|++.++.+|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 6778899999974 3789999999999999999999999999999999999999999999999874 89
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
++++++|.+++ +||+.+++|+++|++++.++|||+...+++.
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999997776 7999999999999999999999999988874
No 62
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-31 Score=294.74 Aligned_cols=438 Identities=17% Similarity=0.185 Sum_probs=295.4
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeee--
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 241 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i-- 241 (696)
|||+.+|...+|- -++||....+. .|.++|++.|++|. |+.+.++.-. ..+....+.+
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~-~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQ-KEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhh-hhhccccceeeE
Confidence 7899999888763 57999999998 56666799999999 8888877322 2222211111
Q ss_pred ----c-CCCceEEEEecccCc-cc--cc--ccccccC--CCccc---HHHHHH--HHHHHHHHHhC--CCCeEEEEeCCC
Q 005444 242 ----S-GTEHTHILRVPFRSE-KG--IL--RQWISRF--DVWPY---LETFTE--DVGSEITAELQ--GFPDFIIGNYSD 302 (696)
Q Consensus 242 ----~-~~~~v~I~rvp~~~~-~~--~~--~~wisr~--~i~p~---l~~f~~--~~~~~i~~~~~--~~pDvIh~h~~~ 302 (696)
. +.....+........ -+ ++ ....+|. ..+.+ ..+|+. .+.-.+..... ..|||||+|+|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 0 001011111111000 00 11 1112231 12222 123322 22222222222 479999999999
Q ss_pred chHHHHHHhh----cCCCcEEEEecCCCccCCCC-CCccHhhhhh-hhh-----ccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 303 GNLVASLLAY----KMGITQCTIAHALEKTKYPD-SDIYWKKFDE-KYH-----FSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 303 ~~l~a~lla~----~~gip~v~t~H~l~~~~~~~-s~~~~~~~~~-~y~-----~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
.++++.+++. ...+|.|+|+|++..+.... ....+-.+.. .|. +..+....+..+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 9999999998 44799999999986544322 1111111111 111 11222345667889999999999987
Q ss_pred hhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCC
Q 005444 372 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 451 (696)
Q Consensus 372 ~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~ 451 (696)
.+... ..| +..+.++.+ ....++.-|-||+|.+.+.|.++......--.+-.+.+..++....+++|+
T Consensus 221 ~Ei~t--~~~----g~gl~g~l~------~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIYT--PEY----GEGLEGLLS------WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhcc--ccc----cccchhhhh------hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 65431 111 122222221 123688999999999999998765322111111222345566677788998
Q ss_pred CCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 452 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 452 l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
..+.+.|++.++|||..+||++.+++++..+.+.. ++|+|.|.|.. ...+.+..+++++.. ++...
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~~ 354 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLVV 354 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEEE
Confidence 66778899999999999999999999999998754 99999999933 456778888888754 44433
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc--------CCeEEEECCCCH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYHP 603 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d--------g~~G~l~~p~d~ 603 (696)
- .. ++.+.+.+...+|++++||++|+||++-++||..|+++|++.+||.+|.|.+ ..+||+|.+.|+
T Consensus 355 i----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~ 429 (487)
T COG0297 355 I----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP 429 (487)
T ss_pred e----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH
Confidence 2 22 3455555555799999999999999999999999999999999999999976 579999999999
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
++++.+|..++.-....+..|+.+..++.. ..|+|+..+++|.++|+..
T Consensus 430 ~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 430 DHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 999999999886555556669999999886 6899999999999999863
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=3.5e-30 Score=282.16 Aligned_cols=250 Identities=13% Similarity=0.071 Sum_probs=184.2
Q ss_pred CCCCeEEEEeCCCc---hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEec
Q 005444 290 QGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 366 (696)
Q Consensus 290 ~~~pDvIh~h~~~~---~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 366 (696)
..+||+||+|.+.. .+.+.++++..++|++++.|+++.......... ......+. ...++..++.+|.||++
T Consensus 98 ~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~---~~~~~~~~--~~~e~~~~~~ad~ii~~ 172 (371)
T PLN02275 98 IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGR---SHPLVRLY--RWYERHYGKMADGHLCV 172 (371)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCC---CCHHHHHH--HHHHHHHHhhCCEEEEC
Confidence 46999999987554 456677788889999999998742111000000 00001111 12366788999999999
Q ss_pred cHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccc
Q 005444 367 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQND 446 (696)
Q Consensus 367 S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~ 446 (696)
|+...+...+. .|+ ++.+||||+ .+.|.|......
T Consensus 173 S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~-------------------- 207 (371)
T PLN02275 173 TKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR-------------------- 207 (371)
T ss_pred CHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc--------------------
Confidence 99876522110 122 278999995 456655432100
Q ss_pred cccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh-----------------ccCCCeEEEEEeCccCCCCCcchHHH
Q 005444 447 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVAGYIDVNKSKDREEI 509 (696)
Q Consensus 447 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~-----------------~~~~~~~LvIvG~g~~~~~~~d~e~~ 509 (696)
+ ..+...+++++||+.+.||++.+++|+..+. +..|+++|+|+|+|+.
T Consensus 208 --~---~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~---------- 272 (371)
T PLN02275 208 --L---RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ---------- 272 (371)
T ss_pred --c---cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC----------
Confidence 0 0223457889999999999999999998873 2357899999999987
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCCCCcc
Q 005444 510 AEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPA 586 (696)
Q Consensus 510 ~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS---~~E~fGltvlEAMa~GlPVvat~~gG~~ 586 (696)
.++++++++++++.+ |.|.+. .++.+++..+|+. +|+||.|+ ..|+||++++||||||+|||+|+.||..
T Consensus 273 --~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~ 345 (371)
T PLN02275 273 --KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG 345 (371)
T ss_pred --HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence 678999999999987 887651 4678899999995 99999863 2489999999999999999999999999
Q ss_pred hhhccCCeEEEECCCCHHHHHHHHHHH
Q 005444 587 EIIEHGASGFHIDPYHPDQAAELMADF 613 (696)
Q Consensus 587 EiI~dg~~G~l~~p~d~e~la~~I~~~ 613 (696)
|+|+++.+|++++ |+++++++|.++
T Consensus 346 eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 346 ELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred HHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 9999999999997 699999998654
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.6e-30 Score=281.50 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=191.2
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCC------CCccHhhhhhhhhccchhhhhHHhhhcCCEE
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPD------SDIYWKKFDEKYHFSCQFTADLIAMNNADFI 363 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~------s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 363 (696)
..++|+||++.... +..+....++|.+..+|+.....+.. ....+......+.+......+..+++++|.|
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999875432 22222556788888888632211110 0000000000011111112355678999999
Q ss_pred EeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc
Q 005444 364 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 443 (696)
Q Consensus 364 It~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~ 443 (696)
+++|...++..++ .+..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~------------------------~~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKK------------------------YYGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHH------------------------HhCCCcEEECCCCCHhhcCcCC---------------------
Confidence 9999987653211 1134567999999987665421
Q ss_pred ccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 444 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457999999999999999999998763 78999999876 333333 4
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~ 603 (696)
..++|.|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568899999 7788999999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 648 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l 648 (696)
++++++|.+++ +|++ .+.++.++.+ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999997776 6774 2334445555 679999998875
No 65
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=6.2e-30 Score=278.85 Aligned_cols=273 Identities=20% Similarity=0.262 Sum_probs=212.5
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCC-CccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
.++|+||++....... .++......+.+.++|+......... ...|+. .+.. ....++.+|.||++|+.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhHH------HHhChhhCCEEEEccHH
Confidence 6899999988765433 33444455677888997533221110 011111 1111 11236789999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
.++...+.. + ...++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~---------------------~-~~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQF---------------------G-NYNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHh---------------------C-CCCceEEEcccccChhhcccch--------------------------
Confidence 765332211 1 0234889999999877655320
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
...++..|+++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+..+++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 03455689999999999999999999999988889999999999876 456777888999999999
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC-CcchhhccCCeEEEECCCCHHHHHH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 608 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g-G~~EiI~dg~~G~l~~p~d~e~la~ 608 (696)
|.|+. .++.++++. +|++|.||..|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99942 357888885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 648 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l 648 (696)
+|..++ .|++.+++|++++++.+ ++|||+.++++|
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 997776 89999999999999995 899999998864
No 66
>PHA01630 putative group 1 glycosyl transferase
Probab=99.97 E-value=2.5e-29 Score=270.68 Aligned_cols=258 Identities=12% Similarity=0.111 Sum_probs=189.4
Q ss_pred EeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHh-hhcCCEEEeccHHHHhhccc
Q 005444 298 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 376 (696)
Q Consensus 298 ~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 376 (696)
.|+....+..+-...+.|+|+++++|+... +.. ..+... .+.+|.||++|....+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------l~~--------~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------ISH--------TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------hhH--------HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 444444455555556678999999997211 000 112334 57899999999987653211
Q ss_pred ccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCC
Q 005444 377 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 456 (696)
Q Consensus 377 ~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~ 456 (696)
.|++. +.++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999999887654210 123
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+.++++.|++.+.||++.|++|++++.+..++++|+|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4577788899999999999999999988778999999997654 1111 12222 233
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECC----------------
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 600 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p---------------- 600 (696)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5678899999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhhhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 601 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 601 ---~d~e~la~~I~~~l~~l~~d--p~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 27788888887766 44 24455555555555679999999999999999754
No 67
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=1.2e-28 Score=276.46 Aligned_cols=274 Identities=11% Similarity=0.104 Sum_probs=196.4
Q ss_pred CCCCeEEEEeCCCc-hHH--HHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhh-hcCCEEEe
Q 005444 290 QGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM-NNADFIIT 365 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~--a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~-~~AD~IIt 365 (696)
...|||||.+.+.. ++. |..++++++ |+|.++|+............+ +.. +.... ...+.. .++|.|++
T Consensus 432 ~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g~--L~~---~llk~-l~~~v~r~hcD~VIa 504 (794)
T PLN02501 432 SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA--LQA---FFVKH-INNWVTRAYCHKVLR 504 (794)
T ss_pred ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcchh--HHH---HHHHH-HHHHHHHhhCCEEEc
Confidence 45999999998875 666 888999999 899999985432111000000 000 00000 001111 12899999
Q ss_pred ccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 366 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 366 ~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
+|..... + . ...+..| ||||++.|.|......+ .
T Consensus 505 PS~atq~-------------------L-------~--~~vI~nV-nGVDte~F~P~~r~~~~-r---------------- 538 (794)
T PLN02501 505 LSAATQD-------------------L-------P--KSVICNV-HGVNPKFLKIGEKVAEE-R---------------- 538 (794)
T ss_pred CCHHHHH-------------------h-------c--ccceeec-ccccccccCCcchhHHH-H----------------
Confidence 9965432 0 0 1122222 69999999886553322 1
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
.+|. +...+.++|+|||.+.||++.|++|++.+....++++|+|+|+|+. .+.+++++.++++
T Consensus 539 --~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL- 601 (794)
T PLN02501 539 --ELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL- 601 (794)
T ss_pred --hcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC-
Confidence 1343 2233458999999999999999999999887778999999999988 6788899998887
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 605 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~ 605 (696)
+|.|+|... +...+|+ ++|+||+||.+|+||++++||||||+|||+|+.||. +++.++.+|+.+ +|+++
T Consensus 602 -~V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~Ea 670 (794)
T PLN02501 602 -NLNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSED 670 (794)
T ss_pred -EEEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHH
Confidence 489999433 2345677 599999999999999999999999999999999985 456678888865 68999
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++|.+++ .|+..+..+.+ ...|||+.+++++++...+
T Consensus 671 fAeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 671 FVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 999998877 56654433321 2489999999999998764
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=5.8e-28 Score=268.91 Aligned_cols=329 Identities=16% Similarity=0.169 Sum_probs=207.8
Q ss_pred CCCCeEEEEeCCCchHHHHHHh-hcCCCcEEEEecCCCccCCCCC---Ccc-------HhhhhhhhhccchhhhhHHhhh
Q 005444 290 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDS---DIY-------WKKFDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla-~~~gip~v~t~H~l~~~~~~~s---~~~-------~~~~~~~y~~~~~~~~e~~a~~ 358 (696)
..++||+|+|.|..+..+..++ +..++|.|+|.|+....++... +++ +...........+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999998888888 5688999999999877664211 122 1111112223334456888999
Q ss_pred cCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhh
Q 005444 359 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 438 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~ 438 (696)
.||.++|+|+....+.+... +.++.+ |||||+|.+.|.+..+..+.....++.|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll---------------------~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL---------------------KRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh---------------------CCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999998876543321 222344 9999999999877654332222222222221
Q ss_pred cCCccccccccCCCCCCCCCEEEE-Eccccc-cCChHHHHHHHHHhhcc----CCC---eEEEEEeCccCCCCCcchHH-
Q 005444 439 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDREE- 508 (696)
Q Consensus 439 l~~~~~~~~~~g~l~~~~k~iIl~-vGRL~~-~Kgi~~Llea~~~l~~~----~~~---~~LvIvG~g~~~~~~~d~e~- 508 (696)
. ....+.++++ ++++++++| +||+.. +||++.+++|++++... ..+ +-|+|+-++.. +...|.
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 0112344665 677778777 799998 99999999999998641 222 23444433311 000000
Q ss_pred --HHHH-------------------------------------------------------------------HHHHHHH
Q 005444 509 --IAEI-------------------------------------------------------------------EKMHELM 519 (696)
Q Consensus 509 --~~~~-------------------------------------------------------------------~~l~~li 519 (696)
++.. +.+-..+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000 0111122
Q ss_pred HHcCCC----Cc--EEEecc---ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc----c
Q 005444 520 KTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 586 (696)
Q Consensus 520 ~~~~L~----~~--V~flG~---~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~----~ 586 (696)
++.+|. ++ |.|... .+|.+-..+.+.+++ +||+||+||.+|+||++++|||+||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 222332 22 344331 223344456777788 599999999999999999999999999999999999 5
Q ss_pred hhhccC-CeEEEECC-------CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 005444 587 EIIEHG-ASGFHIDP-------YHPDQAAELMADFFGKCKENPSHWKKISDGGL-KRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 587 EiI~dg-~~G~l~~p-------~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~-~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
|++.++ ..|+.+.+ .+.++++++|.++ ... +.++.+.++++ ++..+.|+|+..++.|.+.|..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~----~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEF----CQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHH----hCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 666554 36777763 3344445555444 333 56776766655 3344899999999999998763
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=1.9e-26 Score=250.80 Aligned_cols=344 Identities=13% Similarity=0.095 Sum_probs=234.6
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 243 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~ 243 (696)
|||+|++.. +||.+.... +|++.|.++||+|. ++|...... ....+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~~-----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGME-----ARLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCchh-----hhcccc---
Confidence 898888642 368887777 67777899999999 887642110 001111
Q ss_pred CCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 244 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 244 ~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
.++.+.+++.....+. ...++.............+.+.+. +.+||+||+|.+.+++.+.++++..++|+|++.|
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 122 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLKGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ 122 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcC
Confidence 2567777776432110 000000000000111112222222 3489999999987777788888889999998766
Q ss_pred CCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCC
Q 005444 324 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 403 (696)
Q Consensus 324 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~ 403 (696)
+... . ...++.++.+|.+++++++... ....
T Consensus 123 ~~~~--------~--------------~~~r~~~~~~d~ii~~~~~~~~---------------------------~~~~ 153 (357)
T PRK00726 123 NAVP--------G--------------LANKLLARFAKKVATAFPGAFP---------------------------EFFK 153 (357)
T ss_pred CCCc--------c--------------HHHHHHHHHhchheECchhhhh---------------------------ccCC
Confidence 4311 0 1134567789999998874311 0126
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHH-HHHHHh
Q 005444 404 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGKN 482 (696)
Q Consensus 404 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Ll-ea~~~l 482 (696)
.++.+|+||+|.+.+.+.... ++++. +++.++|+++|+....|++..++ +|+.++
T Consensus 154 ~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 154 PKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred CCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 799999999998765542211 11333 45677889999988888876555 898888
Q ss_pred hccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCC
Q 005444 483 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 562 (696)
Q Consensus 483 ~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 562 (696)
.+. + ..++++|+|.. +.+.+..+ +++. |.+.|++ +++..+++ ++|++|.+|-
T Consensus 210 ~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~-~~d~~i~~~g--- 261 (357)
T PRK00726 210 PEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYA-AADLVICRAG--- 261 (357)
T ss_pred hhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHH-hCCEEEECCC---
Confidence 643 3 56778888854 33444445 6664 9999953 46888888 4999998762
Q ss_pred CcHHHHHHHHcCCcEEEcCCCC--------cchhhccCCeEEEECCCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 563 FGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 563 fGltvlEAMa~GlPVvat~~gG--------~~EiI~dg~~G~l~~p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
+.+++|||+||+|+|++..++ ..+.+.+.++|++++++| +++++++|.+++ +|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHHH
Confidence 689999999999999997653 236677788999999888 999999997766 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 005444 633 KRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 633 ~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++ +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 886 88999999999988754
No 70
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=8.5e-26 Score=241.61 Aligned_cols=224 Identities=13% Similarity=0.148 Sum_probs=166.2
Q ss_pred hhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcch
Q 005444 356 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 435 (696)
Q Consensus 356 a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~ 435 (696)
.|.+.+.+|++|...++..++ .|++ . .+ +|+||+|.+.|.|.........
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHHHH------
Confidence 455677889999876653221 1332 2 23 4789999999887542211111
Q ss_pred hhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHH
Q 005444 436 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 511 (696)
Q Consensus 436 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~ 511 (696)
+.++.. .++.++|+++||++++||++.|++|+.++.+..++ ++|+++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 112221 24667899999999999999999999999876654 578888732
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 512 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 512 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 4567899999994 99999999999999999999999999999999999887531
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 592 ------------------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 592 ------------------g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
...||.+++.|+++++++|..+++. .|++. .+.++++++ ++|+|+.++++|+
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHHHHHHhh
Confidence 2358899999999999999887631 34433 366777776 8999999999886
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.95 E-value=3.9e-26 Score=256.68 Aligned_cols=312 Identities=13% Similarity=0.077 Sum_probs=213.1
Q ss_pred CCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
..|+|+.|+....+++.++.++ ...|+++..|... |.+.. |..+.. ...-...+..+|.|...+...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hipf----P~~e~-~~~lp~-------~~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPF----PSSEI-FRCLPW-------REELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCC----CChHH-HhhCCC-------hHHHHHHHhcCCEEEECCHHH
Confidence 6799999999887777777654 3588999999653 22221 211110 011123566799999988765
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
....-+........ ..+. .......| ...++.++|||||.+.|.+.......... +. +..+
T Consensus 199 ~~~Fl~~~~~~l~~-~~~~-~~~i~~~g---~~~~i~vip~GID~~~f~~~~~~~~~~~~----~~----------~~~~ 259 (460)
T cd03788 199 ARNFLSCCSRLLGL-EVTD-DGGVEYGG---RRVRVGAFPIGIDPDAFRKLAASPEVQER----AA----------ELRE 259 (460)
T ss_pred HHHHHHHHHHHcCC-cccC-CceEEECC---EEEEEEEEeCeEcHHHHHHHhcCchhHHH----HH----------HHHH
Confidence 43221111000000 0000 00000111 13478999999999988764321110000 00 0122
Q ss_pred CCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 005444 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 525 (696)
Q Consensus 451 ~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 525 (696)
. .+++++|+++||+++.||++.+++|++++.+.+|+ ++|+++|++.. ....+..++.+.+.+++.+.+..
T Consensus 260 ~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 260 R--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred h--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHHHHHHHHHHHHHhcc
Confidence 2 45788999999999999999999999998777675 67999986532 11223344556677776664431
Q ss_pred -----CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhccCCeEE
Q 005444 526 -----GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGASGF 596 (696)
Q Consensus 526 -----~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~dg~~G~ 596 (696)
..|++++ ..++.+++..+|+ ++|+||+||..|+||++++|||+||+| ||+|+.+|..+. +.+|+
T Consensus 335 g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~ 407 (460)
T cd03788 335 GTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGAL 407 (460)
T ss_pred CCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCE
Confidence 2355543 1678899999999 599999999999999999999999999 999999988877 46899
Q ss_pred EECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 597 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 597 l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
+++|.|++++|++|.+++. .+++.++.+++++++++ ++|||+..+++++.
T Consensus 408 lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 408 LVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 9999999999999988772 35678889999999998 78999999999875
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=2.8e-25 Score=240.20 Aligned_cols=324 Identities=13% Similarity=0.109 Sum_probs=222.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccc
Q 005444 185 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 264 (696)
Q Consensus 185 ~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~w 264 (696)
.+||...++. .|++.|.++||+|+ |+|...... .+.. ...++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC-----
Confidence 3588888888 67777899999999 888753211 0011 11246777777643211
Q ss_pred cccCCCcccHH------HHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHh
Q 005444 265 ISRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWK 338 (696)
Q Consensus 265 isr~~i~p~l~------~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~ 338 (696)
...+..+. .....+.+.+. +.+||+||+|.+..++.+.++++..++|+++..|+...
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------- 124 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------- 124 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------
Confidence 11111111 11112233333 34899999998777777788888899998876554211
Q ss_pred hhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCC
Q 005444 339 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 418 (696)
Q Consensus 339 ~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f 418 (696)
. ..+++.+..+|.|+++|+...+. ..+.++.+|+||+|.+.+
T Consensus 125 ~-----------~~~~~~~~~~~~vi~~s~~~~~~---------------------------~~~~~~~~i~n~v~~~~~ 166 (350)
T cd03785 125 G-----------LANRLLARFADRVALSFPETAKY---------------------------FPKDKAVVTGNPVREEIL 166 (350)
T ss_pred c-----------HHHHHHHHhhCEEEEcchhhhhc---------------------------CCCCcEEEECCCCchHHh
Confidence 0 01234566799999999876430 125689999999998766
Q ss_pred CCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHH-HHHHHHHhhccCCCeEE-EEEeC
Q 005444 419 FPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAG 496 (696)
Q Consensus 419 ~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~~~~~~~L-vIvG~ 496 (696)
.+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|.
T Consensus 167 ~~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~ 220 (350)
T cd03785 167 ALDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGK 220 (350)
T ss_pred hhhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCC
Confidence 54321 122454 567788888887777777754 4588888763 45664 46677
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc
Q 005444 497 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 576 (696)
Q Consensus 497 g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP 576 (696)
+ + .+++.+.++++ .++|.|.|++ .++..+|+. +|++|.+|- +++++|||++|+|
T Consensus 221 g-~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~P 274 (350)
T cd03785 221 G-D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLP 274 (350)
T ss_pred c-c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCC
Confidence 6 4 45666777665 4689999943 468888884 999998762 6899999999999
Q ss_pred EEEcCCCC--------cchhhccCCeEEEECCC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 005444 577 TFATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 577 Vvat~~gG--------~~EiI~dg~~G~l~~p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~ 646 (696)
+|+++.++ ..+.+.++++|++++++ |+++++++|.+++ .|++.+++|++++++++ +.+.-+++++
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 275 AILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 99987654 35677778899999987 8999999997776 79999999999999887 5666666553
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.94 E-value=6.8e-25 Score=236.99 Aligned_cols=315 Identities=15% Similarity=0.139 Sum_probs=208.1
Q ss_pred HHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccH---HHHHH
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 279 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l---~~f~~ 279 (696)
.|+++|.++||+|+ ++|+..... . .. ....++.+.+++.....+ .+....++.. .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~--~----~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE--K----RL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch--h----cc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67778899999999 888632110 0 00 011256777777643211 0000111111 11122
Q ss_pred HHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhc
Q 005444 280 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 359 (696)
Q Consensus 280 ~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~ 359 (696)
.+.+.+. +.+||+||+|.+..+..+.++++..++|+|+..|+... . ..+++..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~--------~--------------~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP--------G--------------LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc--------c--------------HHHHHHHHH
Confidence 2333333 45899999998777777777888889998754332100 0 013456778
Q ss_pred CCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhc
Q 005444 360 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 439 (696)
Q Consensus 360 AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l 439 (696)
+|.+++.|+...+. -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 99999999875430 133689999997655432110
Q ss_pred CCccccccccCCCCCCCCCEEEEEccccccCChHH-HHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 440 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 440 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
+.+++ ++++++|+++|+....|++.. +++++..+.+. +.++++++++.+ .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 11444 567788999998888888755 55888887652 466655554433 3567777
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC-------cchhhcc
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 591 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG-------~~EiI~d 591 (696)
++++++.+.+.|.. . ++..+|+ ++|++|.+| + |++++|||++|+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88888765555542 1 5677888 599999875 2 789999999999999997754 2467888
Q ss_pred CCeEEEECCCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 005444 592 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 646 (696)
Q Consensus 592 g~~G~l~~p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~ 646 (696)
+.+|++++++| +++++++|.+++ +||+.+++|++++++++ +.+.-+.+++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 99999999886 999999997766 89999999999998876 4555554443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.94 E-value=1.1e-24 Score=243.54 Aligned_cols=312 Identities=16% Similarity=0.158 Sum_probs=212.5
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|.+|+....+++.++.++. ..++.+..|.. +|.++++.. + .....-...|-.||.|...|+..
T Consensus 127 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHip----fP~~e~f~~-l-------p~r~~il~gll~~dligF~t~~~ 194 (456)
T TIGR02400 127 PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIP----FPSSEIYRT-L-------PWRRELLEGLLAYDLVGFQTYDD 194 (456)
T ss_pred CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCC----CCChHHHhh-C-------CcHHHHHHHHhcCCEEEECCHHH
Confidence 45899999999888888887764 45788889953 333332211 1 11111234788999999999988
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
+..........-.. -..++ .+..+ ....++.++|||||++.|.+........... .. .++.+
T Consensus 195 ~~~Fl~~~~~~l~~--~~~~~--~~~~~--g~~~~v~viP~GID~~~f~~~~~~~~~~~~~-~~----------lr~~~- 256 (456)
T TIGR02400 195 ARNFLSAVSRELGL--ETLPN--GVESG--GRTVRVGAFPIGIDVDRFAEQAKKPSVQKRI-AE----------LRESL- 256 (456)
T ss_pred HHHHHHHHHHHhCC--cccCC--ceEEC--CcEEEEEEecCcCCHHHHHHHhcChhHHHHH-HH----------HHHHc-
Confidence 76543322211000 00000 00001 1134788999999999987643221100000 00 01111
Q ss_pred CCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC-C
Q 005444 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-D 525 (696)
Q Consensus 451 ~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L-~ 525 (696)
+++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... ....+.....+.+++++.+.+. .
T Consensus 257 ----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l~~~i~~lv~~in~~~ 329 (456)
T TIGR02400 257 ----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQLRRQVEELVGRINGRF 329 (456)
T ss_pred ----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHHHHHHHHHHHHHHhcc
Confidence 3677999999999999999999999998776665 56888864321 1112222333444444433221 1
Q ss_pred Cc-----EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhccCCeEE
Q 005444 526 GQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGASGF 596 (696)
Q Consensus 526 ~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~dg~~G~ 596 (696)
+. |.+++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+.+|..+.+. +|+
T Consensus 330 ~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gl 402 (456)
T TIGR02400 330 GTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GAL 402 (456)
T ss_pred CCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcE
Confidence 11 44444 2677899999999 599999999999999999999999999 99999999888883 799
Q ss_pred EECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 597 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 597 l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
+++|.|++++|++|.++++ .+++.++++.++.++++ .+||+...++++++-
T Consensus 403 lVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 403 LVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 9999999999999988773 47788999999999998 679999999998763
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=2.2e-23 Score=232.33 Aligned_cols=285 Identities=15% Similarity=0.139 Sum_probs=191.7
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.+||+||++..+........+++.++|++++-|.+... +...|..+. ...+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~~---------~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKFK---------RFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHHH---------HHHHHHHHhCCEEEECCHHH
Confidence 39999998855532223334577899988876543211 111111111 12345788999999999987
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccC
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 450 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g 450 (696)
++...+ .|++ +. +.+++|+ +.+.+.+....... .. .++.++
T Consensus 190 ~~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~~--------------~r~~~~ 230 (425)
T PRK05749 190 AERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA-AT--------------LRRQLA 230 (425)
T ss_pred HHHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH-HH--------------HHHHhc
Confidence 652111 1222 44 7788884 33333222111110 00 111232
Q ss_pred CCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 005444 451 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 530 (696)
Q Consensus 451 ~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 530 (696)
+++++++++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++|+.. +.|
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~~-~~~ 292 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLSY-VRR 292 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCcE-EEc
Confidence 356788888864 6889999999999887789999999999876 1257888899988863 555
Q ss_pred ecccccc--------CChhHHHHHHHccccEE-EeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccC-CeEEEEC
Q 005444 531 IAAQTNR--------ARNGELYRYIADTKGAF-VQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHID 599 (696)
Q Consensus 531 lG~~~~~--------v~~~el~~~la~aadvf-V~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg-~~G~l~~ 599 (696)
.|..... ...+++..+|+ .+|++ +.||..|++|.+++|||+||+|||++.. ++..|+++.. .+|++++
T Consensus 293 ~~~~~~~~~~~v~l~~~~~el~~~y~-~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~ 371 (425)
T PRK05749 293 SQGEPPSADTDVLLGDTMGELGLLYA-IADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQ 371 (425)
T ss_pred cCCCCCCCCCcEEEEecHHHHHHHHH-hCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEE
Confidence 4421100 02468999999 49995 4578889999999999999999999864 6677776553 4688888
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++|+++++++|.+++ +||+.+++|+++|++++.++ ...++++.+++.
T Consensus 372 ~~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 372 VEDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred ECCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 999999999997766 89999999999999998655 255566666554
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.91 E-value=1.3e-22 Score=222.80 Aligned_cols=264 Identities=11% Similarity=0.059 Sum_probs=181.0
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+||+||++++..++.....+...++|++++.++.... ..+..+.+|.++++|+.
T Consensus 102 ~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~------------------------~~~~~~~ad~i~~~s~~ 157 (380)
T PRK13609 102 AEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH------------------------KIWVHREVDRYFVATDH 157 (380)
T ss_pred HhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC------------------------cccccCCCCEEEECCHH
Confidence 349999999877665544444556779988666543210 01246689999999987
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+... ..|+ ...|+.++++.++.. |.+...... .++.+
T Consensus 158 ~~~~l~--------------------~~gi--~~~ki~v~G~p~~~~-f~~~~~~~~------------------~~~~~ 196 (380)
T PRK13609 158 VKKVLV--------------------DIGV--PPEQVVETGIPIRSS-FELKINPDI------------------IYNKY 196 (380)
T ss_pred HHHHHH--------------------HcCC--ChhHEEEECcccChH-HcCcCCHHH------------------HHHHc
Confidence 654211 1133 366888876655432 222111111 12335
Q ss_pred CCCCCCCCC-EEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 450 GTLSDRSKP-IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 450 g~l~~~~k~-iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
|+ +++++ ++++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|
T Consensus 197 ~l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v 258 (380)
T PRK13609 197 QL--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DAL 258 (380)
T ss_pred CC--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcE
Confidence 65 45555 455678888899999999987542 6789988865432 12456777776654 689
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCCc----chhhccCCeEEEECCCCH
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG~----~EiI~dg~~G~l~~p~d~ 603 (696)
+|+|++. ++..+++ ++|++|. ++.|++++|||+||+|+|+++ .+|. .+++.+ +|+.+...|+
T Consensus 259 ~~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~ 325 (380)
T PRK13609 259 KVFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDD 325 (380)
T ss_pred EEEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCH
Confidence 9999543 4678888 5999985 567999999999999999985 5653 234433 3444555799
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
++++++|.+++ .||+.+++|++++++.. +.++++.+++.+++++..
T Consensus 326 ~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 326 EEVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhhh
Confidence 99999997766 89999999999998765 678999999999988653
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.91 E-value=8.3e-24 Score=205.41 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=143.8
Q ss_pred CCCCCEEEEEccccccCChHHHHHHHHHhhcc-CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 005444 454 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 532 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~-~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 532 (696)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+.. ...+..+++.+++.++|.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 67889999999999999999999999999763 68999999996544 677889999999999999999
Q ss_pred cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHH
Q 005444 533 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 612 (696)
Q Consensus 533 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~ 612 (696)
.++..++..+++. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|..
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5667899999995 99999999999999999999999999999999999999999999999999999999999977
Q ss_pred HHHhhhcCHHHHHHHHHHHHHH
Q 005444 613 FFGKCKENPSHWKKISDGGLKR 634 (696)
Q Consensus 613 ~l~~l~~dp~~~~~m~~~a~~~ 634 (696)
++ .+++.++.|+++++++
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 76 8999999999999875
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=2e-22 Score=238.52 Aligned_cols=309 Identities=13% Similarity=0.148 Sum_probs=210.8
Q ss_pred CCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-.|+....+++..+.++ ...++.+..|... |.+.++.. ......-...|-.||.|-+.|+..
T Consensus 147 ~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPF----Ps~e~fr~--------lp~r~~il~gll~aDligF~t~~y 214 (797)
T PLN03063 147 EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPF----PSSEIYKT--------LPSRSELLRAVLTADLIGFHTYDF 214 (797)
T ss_pred CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCC----CCHHHHhh--------CCCHHHHHHHHhcCCEEEeCCHHH
Confidence 3489999999988888888776 4578889999653 33332211 111111234688999999999877
Q ss_pred Hhhcccccccccccccccccccceeeccccc--CCCcEEEecCCCcCCCCCCCchHH---HHHhhhhcchhhhcCCcccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDV--FDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~--~~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~~~~~l~~~~~~ 445 (696)
+...-+...... ++.. ...++.. ...++.++|||||.+.|.+..... .+...+
T Consensus 215 ~r~Fl~~~~r~l-----~~~~---~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l-------------- 272 (797)
T PLN03063 215 ARHFLSACTRIL-----GVEG---THEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKEL-------------- 272 (797)
T ss_pred HHHHHHHHHHHh-----Cccc---cCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHH--------------
Confidence 654322111000 0000 0011111 134788999999998886543211 111110
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCe----EEEEEeCccCCCCCcchHHHHHHHHHHHHHHH
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 521 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~----~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~ 521 (696)
++. ..++++|+++|||++.||+..+++||+++.+.+|++ .|+.+++... ....+ .+.+++.+++
T Consensus 273 r~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~~~----y~~l~~~v~~ 340 (797)
T PLN03063 273 KRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDVPE----YQKLKSQVHE 340 (797)
T ss_pred HHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---CchHH----HHHHHHHHHH
Confidence 011 235789999999999999999999999988777765 3554443211 11122 3344444444
Q ss_pred cC--CC---CcEEEec--cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhc
Q 005444 522 YK--LD---GQFRWIA--AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIE 590 (696)
Q Consensus 522 ~~--L~---~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~ 590 (696)
+. +. +.+.|.+ +....++.+++..+|+ +||+||+||..||||++++|||+||+| +|+|..+|.++.+
T Consensus 341 l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l- 418 (797)
T PLN03063 341 LVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL- 418 (797)
T ss_pred HHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-
Confidence 32 22 2233333 1113678899999999 599999999999999999999999999 9999999999976
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 591 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 591 dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+.+|++++|.|++++|++|.+++. .+++.+++..+..++++ .++||...++.+++-+.
T Consensus 419 -~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 419 -GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELN 476 (797)
T ss_pred -cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHH
Confidence 557999999999999999988873 48888999899999998 89999999999888664
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.90 E-value=1.9e-21 Score=213.35 Aligned_cols=266 Identities=12% Similarity=0.079 Sum_probs=176.4
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+.+|+.++.+....++. ...+.++|+.+++..... +... ... ...+...++.||.|+|+|..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~---~~~~~~~Vyd~~D~~~~~-~~~~---~~~---------~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAA---LLQASLVVYDCVDDLSAF-PGGP---PEL---------LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHHHh---hcCCCeEEEEcccchhcc-CCCC---HHH---------HHHHHHHHHhCCEEEECCHH
Confidence 5566666666555433333 356788999988753321 1111 000 03466789999999999987
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+..+ .. ..++.+||||+|.+.|.+......... .
T Consensus 164 l~~~~~----------------------~~---~~~i~~i~ngvd~~~f~~~~~~~~~~~-----------------~-- 199 (373)
T cd04950 164 LYEAKR----------------------RL---NPNVVLVPNGVDYEHFAAARDPPPPPA-----------------D-- 199 (373)
T ss_pred HHHHHh----------------------hC---CCCEEEcccccCHHHhhcccccCCChh-----------------H--
Confidence 654211 11 368999999999998876432210000 0
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
+...++++|+|+|++++.++++.+.++.. ..|+++|+|+|++... ..... +...++|+
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~~----~~~~~nV~ 257 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPSA----LLRLPNVH 257 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChhH----hccCCCEE
Confidence 01356789999999999888776655443 3478999999998320 01111 11246799
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.+.. +..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHH
Confidence 999 7788999999995 9999999863 4689999999999999999986544 444443444 456999
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+++++|.+++. .+...... .+.+ +.+.|||+..++++++...
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 99999988652 22222111 2222 4588999999999986543
No 80
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.89 E-value=3.1e-21 Score=221.12 Aligned_cols=347 Identities=13% Similarity=0.122 Sum_probs=238.8
Q ss_pred HHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhc--------------CCCcEEEEecCCCccC---CCCC----------
Q 005444 281 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTK---YPDS---------- 333 (696)
Q Consensus 281 ~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~--------------~gip~v~t~H~l~~~~---~~~s---------- 333 (696)
..+.+ +.+..+||+||+|.|+++++...+.+. .+.+.++|.|++.... ++..
T Consensus 151 ~l~~l-~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~ 229 (601)
T TIGR02094 151 GVRAL-RALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYA 229 (601)
T ss_pred HHHHH-HHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhh
Confidence 33333 334679999999999998877664221 1366899999976544 2211
Q ss_pred ---CccHhhhhhhh-h---ccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcE
Q 005444 334 ---DIYWKKFDEKY-H---FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKF 406 (696)
Q Consensus 334 ---~~~~~~~~~~y-~---~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~ 406 (696)
.+.+..+.... . +..++..-..++..||.|.++|+...+-++..++.+ + ..++....++
T Consensus 230 ~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~~~i 295 (601)
T TIGR02094 230 ANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEEVPI 295 (601)
T ss_pred hHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhcccccCCc
Confidence 11111110000 0 001234456789999999999988765332221111 0 0111113458
Q ss_pred EEecCCCcCCCCCCCchHHHHHhhhhcc---------------------h-hhhcCCcccccc-----------------
Q 005444 407 NIVSPGADMDIYFPYSEKQKRLTALHGS---------------------I-EQLLFDPEQNDE----------------- 447 (696)
Q Consensus 407 ~VIpnGvD~~~f~p~~~~~~r~~~~~~~---------------------~-~~~l~~~~~~~~----------------- 447 (696)
.-|.||||...|.|.....-..+...+. + +.+..++..+.+
T Consensus 296 ~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~ 375 (601)
T TIGR02094 296 GYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADA 375 (601)
T ss_pred cceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcc
Confidence 8899999999998754322110000000 0 111111111111
Q ss_pred ----ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 ----HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ----~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
.+|...+++.+++++++|+..+||.+.+++++.++.+.- .+++||+.|.+.. .|..-++.++.+..++
T Consensus 376 ~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~~la 451 (601)
T TIGR02094 376 AILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIVEFS 451 (601)
T ss_pred hhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHHHHH
Confidence 355556889999999999999999999999988886421 3599999999865 3455566788888888
Q ss_pred HHcCCCCcEEEeccccccCChhHHHHHHHccccEEEe-CCC-CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEE
Q 005444 520 KTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597 (696)
Q Consensus 520 ~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~-PS~-~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l 597 (696)
++...+++|.|+- . -+..+.+.+-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.
T Consensus 452 ~~~~~~~kv~f~~----~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~ 525 (601)
T TIGR02094 452 KRPEFRGRIVFLE----N-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWA 525 (601)
T ss_pred hcccCCCCEEEEc----C-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEE
Confidence 8766778999985 2 245667766668999999 999 999999999999999999999999998887 6789999
Q ss_pred ECC------------CCHHHHHHHHHHHH-HhhhcC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 598 IDP------------YHPDQAAELMADFF-GKCKEN-----PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 598 ~~p------------~d~e~la~~I~~~l-~~l~~d-----p~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
|.+ .|.+++.++|.+.+ ....++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 526 f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 526 IGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 984 79999999998766 333344 66799999999987767899999999999986
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.88 E-value=1.6e-21 Score=230.81 Aligned_cols=310 Identities=15% Similarity=0.118 Sum_probs=208.6
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|..|+.+..+++..+.++. ..++.+..|...+ .+.+... + .....-...|-.+|.|-..+...
T Consensus 133 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP----~~~~f~~-l-------p~~~~ll~~ll~~Dligf~t~~~ 200 (726)
T PRK14501 133 PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFP----SFEVFRL-L-------PWREEILEGLLGADLIGFHTYDY 200 (726)
T ss_pred CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCC----ChHHHhh-C-------CChHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999988888887653 5678888996533 2222221 1 11112234688999999988876
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHH---HHHhhhhcchhhhcCCcccccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
.....+........ .+-.+ .....|- ..++.++|||||.+.|.+..... .+...+ ++
T Consensus 201 ~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~l--------------r~ 260 (726)
T PRK14501 201 VRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRL--------------RQ 260 (726)
T ss_pred HHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHH--------------HH
Confidence 54322221110000 00000 0011111 23688999999999987643211 111100 00
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
. .+++++|+++||+++.||+..+++||+++.+.+|+ ++|+++|.+.. ..-.+..+..+.+.+++.+.+
T Consensus 261 ---~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l~~~~~~~v~~in 332 (726)
T PRK14501 261 ---D--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEMKREIDELVGRIN 332 (726)
T ss_pred ---H--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHHHHHHHHHHHHHH
Confidence 0 24677999999999999999999999998777675 78999985422 000222344455555555433
Q ss_pred C-------CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHc-----CCcEEEcCCCCcchhhcc
Q 005444 524 L-------DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 524 L-------~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~-----GlPVvat~~gG~~EiI~d 591 (696)
. .+.+.+.| .++.+++..+|+ +||+||+||..||||++++|||+| |.||+++..|+..+++
T Consensus 333 ~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~-- 405 (726)
T PRK14501 333 GEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA-- 405 (726)
T ss_pred hhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC--
Confidence 1 12234555 678899999999 599999999999999999999999 5567777778888875
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
.|++++|.|++++|++|.+++. .+++.+....+++++++ .+|||..+++++++.|..
T Consensus 406 --~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 406 --EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELRE 462 (726)
T ss_pred --cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 4899999999999999988772 23445555557788887 799999999999988764
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.88 E-value=9.2e-21 Score=208.54 Aligned_cols=264 Identities=14% Similarity=0.132 Sum_probs=182.7
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhh-----cCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEE
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAY-----KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFI 363 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~-----~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 363 (696)
+.+||+||++++.. ...+.++++ ..++|+++++.++.... ..+..+.+|.+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~ 154 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRC 154 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEE
Confidence 35999999976543 222222322 34789888776642100 01245689999
Q ss_pred EeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcc
Q 005444 364 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 443 (696)
Q Consensus 364 It~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~ 443 (696)
+++|+...+... ..|++ .+|+.++++++|.+.+.+......
T Consensus 155 ~~~s~~~~~~l~--------------------~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~----------------- 195 (382)
T PLN02605 155 FCPSEEVAKRAL--------------------KRGLE--PSQIRVYGLPIRPSFARAVRPKDE----------------- 195 (382)
T ss_pred EECCHHHHHHHH--------------------HcCCC--HHHEEEECcccCHhhccCCCCHHH-----------------
Confidence 999987654211 12333 779999999998765443322211
Q ss_pred ccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhc----cCCCeE-EEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 444 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 444 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~----~~~~~~-LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
.++.+|+ ++++++|+++|+....|++..+++++..... ..++.+ ++++|.+.. ..+.+.+.
T Consensus 196 -~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~ 261 (382)
T PLN02605 196 -LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR 261 (382)
T ss_pred -HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh
Confidence 1234777 6788999999999999999999999876431 135565 556665422 12333332
Q ss_pred HHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC------CCcchhhccC
Q 005444 519 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHG 592 (696)
Q Consensus 519 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~------gG~~EiI~dg 592 (696)
....+|+|+|+++ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+. +.+.++
T Consensus 262 ----~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~ 325 (382)
T PLN02605 262 ----DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDN 325 (382)
T ss_pred ----cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhC
Confidence 2245799999543 5888888 599999865 48999999999999999983 444 444556
Q ss_pred CeEEEECCCCHHHHHHHHHHHHHhhhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 593 ASGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 593 ~~G~l~~p~d~e~la~~I~~~l~~l~~d-p~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+.|+.+ .|+++++++|.+++ .| ++.+++|+++++++. ...+++.+++.+.++.
T Consensus 326 g~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 326 GFGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELV 379 (382)
T ss_pred Cceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHh
Confidence 677765 69999999998776 66 999999999999887 7788898988887764
No 83
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.87 E-value=1.1e-20 Score=188.61 Aligned_cols=121 Identities=31% Similarity=0.515 Sum_probs=103.5
Q ss_pred EEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChh
Q 005444 462 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 541 (696)
Q Consensus 462 ~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 541 (696)
++|++.+.||++.+++++..+.+..++++++++|++.+ .......+.+++..++|.++| .++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~----~~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLG----GLDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeC----CCCcH
Confidence 99999999999999999999988778999999999877 334444467778889999999 44334
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEE
Q 005444 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 598 (696)
Q Consensus 542 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~ 598 (696)
+....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 444444435999999999999999999999999999999999999999999999875
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=2.2e-19 Score=187.59 Aligned_cols=290 Identities=23% Similarity=0.315 Sum_probs=210.2
Q ss_pred CeEEEEeCCCchH---HHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 293 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 293 pDvIh~h~~~~~l---~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+|+++.+...... .........+.+.+...|....................+.+. ..........+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLK---RLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHH---HHHHhccccccEEEECCHH
Confidence 5999977765433 455566667788888888765433221111111010100000 0011112247778888766
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
.....+. -....++.++||+++...+.+.. .
T Consensus 161 ~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEA-----------------------LGVPNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHH-----------------------hCCCCCceEecCCcCHHHcCccc--------------------------c
Confidence 4221000 00123788999999988776540 1
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
++..+.....++++||+.+.||++.+++++..+.+..++++++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111112247899999999999999999999999887667999999999761 245666888888888999
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 609 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~ 609 (696)
|+| .++..++..+++. +|++++||.+|+||++++|||++|+|||+|+.++..+++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 5556788888884 89999999999999999999999999999999999999988878998877789999999
Q ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 610 MADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 610 I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+..++ ++++.++.+++.+++.+.+.|+|+..++++.+++..
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEE 376 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 98776 777888899887777777899999999999988764
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.85 E-value=1.9e-19 Score=198.75 Aligned_cols=263 Identities=13% Similarity=0.150 Sum_probs=177.8
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+||+||++.+.+++.....++..++|+++...+.... ..+..+.+|.+++.|+.
T Consensus 102 ~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------------------------~~w~~~~~d~~~v~s~~ 157 (391)
T PRK13608 102 KEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------------------------KNWITPYSTRYYVATKE 157 (391)
T ss_pred HhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------------------------cccccCCCCEEEECCHH
Confidence 349999999766554333333445689986554432100 01234689999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
..+... ..|++ ..++.++.++++.....+.. ... .++.+
T Consensus 158 ~~~~l~--------------------~~gi~--~~ki~v~GiPv~~~f~~~~~-~~~------------------~~~~~ 196 (391)
T PRK13608 158 TKQDFI--------------------DVGID--PSTVKVTGIPIDNKFETPID-QKQ------------------WLIDN 196 (391)
T ss_pred HHHHHH--------------------HcCCC--HHHEEEECeecChHhccccc-HHH------------------HHHHc
Confidence 654211 12443 67888888877754322221 111 11235
Q ss_pred CCCCCCCCCE-EEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 450 GTLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 450 g~l~~~~k~i-Il~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
|+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. +.. .++.+.++..++|
T Consensus 197 ~l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~----------~l~---~~l~~~~~~~~~v 258 (391)
T PRK13608 197 NL--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK----------ELK---RSLTAKFKSNENV 258 (391)
T ss_pred CC--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH----------HHH---HHHHHHhccCCCe
Confidence 65 455554 5678999989999999998632 336788877765432 112 2233334455689
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCC----cchhhccCCeEEEECCCCH
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----PAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG----~~EiI~dg~~G~l~~p~d~ 603 (696)
.++|++ +++..+|+ ++|++|. ++.|+|+.|||+||+|+|+++ .+| ...++.+.+.|+.. .|+
T Consensus 259 ~~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~ 325 (391)
T PRK13608 259 LILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTP 325 (391)
T ss_pred EEEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCH
Confidence 999954 35888888 5999997 457999999999999999995 444 22344455667654 589
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
++++++|.+++ +|++.+++|++++++.. +.|+|+.+++.+++++.
T Consensus 326 ~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 326 EEAIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 99999997766 89999999999999886 67999999999998754
No 86
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.83 E-value=5.6e-18 Score=174.21 Aligned_cols=394 Identities=16% Similarity=0.217 Sum_probs=252.7
Q ss_pred cCCCc-eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCC---c
Q 005444 158 GRLPM-VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---T 233 (696)
Q Consensus 158 ~~~p~-~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~---~ 233 (696)
++.+. ...|+++-|.+.- .||-+++.---+|++.+. .-..+++|+|..+.-.... .
T Consensus 37 ~~~~k~~ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k----------~~n~~~viYsGD~n~t~~~IL~k 96 (465)
T KOG1387|consen 37 NRAEKNVKTVGFFHPYCNA----------GGGGERVLWKAVRITQRK----------FPNNVIVIYSGDFNVTPENILNK 96 (465)
T ss_pred hhhhhhceEEEEecccccC----------CCCcceehhHHHHHHHHh----------CCCceEEEEeCCCCCCHHHHHHH
Confidence 34343 3567788766652 366677666566665221 1122355777664321110 0
Q ss_pred cccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHH---HHHHhCCCCeEEEEeCCCchHHHHHH
Q 005444 234 CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE---ITAELQGFPDFIIGNYSDGNLVASLL 310 (696)
Q Consensus 234 ~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~---i~~~~~~~pDvIh~h~~~~~l~a~ll 310 (696)
.....+..-+.+++..+.+..|. |++ ..-|+...-..+.+... +.+..+..|||-+-....+ +.-.+.
T Consensus 97 ~k~~F~idlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~ 167 (465)
T KOG1387|consen 97 VKNKFDIDLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIF 167 (465)
T ss_pred HHHhcCceecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHH
Confidence 01122222334566666665543 232 33454433222333332 2333477999988443322 222233
Q ss_pred hhcCCCcEEEEecCCCcc--------CCCCC-CccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccc
Q 005444 311 AYKMGITQCTIAHALEKT--------KYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQY 381 (696)
Q Consensus 311 a~~~gip~v~t~H~l~~~--------~~~~s-~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy 381 (696)
++..++|++..+|-.--. +.+.+ -+.|..+.-+-.|++. -..+=..||.+++.|.......+..|+
T Consensus 168 r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~l---Y~~~G~~ad~vm~NssWT~nHI~qiW~-- 242 (465)
T KOG1387|consen 168 RRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALL---YQSAGSKADIVMTNSSWTNNHIKQIWQ-- 242 (465)
T ss_pred HHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHH---HHhccccceEEEecchhhHHHHHHHhh--
Confidence 446789999999942110 01111 1222222111112211 123456899999999887655444432
Q ss_pred cccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccccCCCCCCCCCEEE
Q 005444 382 ESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVF 461 (696)
Q Consensus 382 ~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~iIl 461 (696)
..+..+|+|..+.+..... .+. ...+.+.++
T Consensus 243 ---------------------~~~~~iVyPPC~~e~lks~---------------------------~~t-e~~r~~~ll 273 (465)
T KOG1387|consen 243 ---------------------SNTCSIVYPPCSTEDLKSK---------------------------FGT-EGERENQLL 273 (465)
T ss_pred ---------------------ccceeEEcCCCCHHHHHHH---------------------------hcc-cCCcceEEE
Confidence 3467788887776521110 111 145678899
Q ss_pred EEccccccCChHHHHHHHHHhhcc------CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 462 SMARLDHVKNMTGLVECYGKNSQL------RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 462 ~vGRL~~~Kgi~~Llea~~~l~~~------~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
++|.+.+.||.. +++.++-...+ .+.++|+|||+-.. .++.+..+.|+.++++++++++|.|.-
T Consensus 274 ~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~F~~--- 343 (465)
T KOG1387|consen 274 SLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQFEK--- 343 (465)
T ss_pred EEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceEEEe---
Confidence 999999999999 55544433222 25689999999866 456677889999999999999999987
Q ss_pred ccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc-chhhcc---CCeEEEECCCCHHHHHHHHH
Q 005444 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIEH---GASGFHIDPYHPDQAAELMA 611 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~-~EiI~d---g~~G~l~~p~d~e~la~~I~ 611 (696)
.+|.+++..++.. |.+.|+.-+.|-||+.++|+||+|+-+|+.+.||+ -||+.+ ..+||+.+ +.++.|++|.
T Consensus 344 -N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iL 419 (465)
T KOG1387|consen 344 -NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAIL 419 (465)
T ss_pred -cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHH
Confidence 7899999999995 99999999999999999999999999999999887 466643 36899984 6788999998
Q ss_pred HHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 612 DFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 612 ~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
++.. .|++.+..|..+||..+ .+|+-....+.+.+.+
T Consensus 420 kIv~---~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 420 KIVK---LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred HHHH---cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 8874 78888999999999887 8899888877777553
No 87
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.82 E-value=6.7e-18 Score=188.61 Aligned_cols=314 Identities=11% Similarity=0.070 Sum_probs=215.1
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-.|+....+++..+.++. ..++-+..|.. +|.+++... + .....-...|-.||.|=.-|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiP----FPs~eifr~-L-------P~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTP----FPSADVFNI-L-------PWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCC----CCChHHHhh-C-------CchHHHHHHHhcCCeEEeCCHHH
Confidence 44899999999888888887653 46778888864 333322111 1 11112234677899999988877
Q ss_pred Hhhccccccccccccc-cc---cccc---------ceeecccccCC--CcEEEecCCCcCCCCCCCchHH---HHHhhhh
Q 005444 371 IAGTKNTVGQYESHTA-FT---LPGL---------YRVVHGIDVFD--PKFNIVSPGADMDIYFPYSEKQ---KRLTALH 432 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~-~~---~p~l---------~~~~~gi~~~~--~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~ 432 (696)
+...-+.....-.... .. .+.. -....++.... -++.++|.|||.+.|.+..... .+...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~-- 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMER-- 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHH--
Confidence 6544332221100000 00 0000 00000111112 2578899999999886542211 11111
Q ss_pred cchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHH
Q 005444 433 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 508 (696)
Q Consensus 433 ~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~ 508 (696)
.++.+| ++++|++++||+..||+...++||+++.+.+|+ +.|++||.... +..++.
T Consensus 278 ------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 278 ------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred ------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 112233 578999999999999999999999999877775 79999987643 223445
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cE
Q 005444 509 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 577 (696)
Q Consensus 509 ~~~~~~l~~li~~~-------~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PV 577 (696)
.+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ +|||++.||+.||++++..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 55667777777765 4445466666 788999999999 59999999999999999999999998 99
Q ss_pred EEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 578 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 578 vat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
|.|..+|.++.+ ..+++++|.|++++|++|.+++. ..++.+++--+..++++ .++|....++.+++-
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~ 479 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADEFLAA 479 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999999998766 35899999999999999998873 45556666666667776 788888888877754
No 88
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.80 E-value=3.2e-18 Score=187.06 Aligned_cols=276 Identities=14% Similarity=0.103 Sum_probs=177.9
Q ss_pred CCCCeEEEEeCC-CchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~-~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||+|.. ...+.++++++.+|+|++++-+++ .+..... .|.. .. ......+.+|.++++|+
T Consensus 84 ~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~--~~--------~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 84 EEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPE--EI--------NRQLTGHIADLHFAPTE 150 (365)
T ss_pred HcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCcc--HH--------HHHHHHHHHHhccCCCH
Confidence 348999999964 446778899999999987654443 1100000 0100 00 00112335899999998
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
...+... ..|++ +.++.+++||+....+.+...... ...++.
T Consensus 151 ~~~~~l~--------------------~~G~~--~~~I~vign~~~d~~~~~~~~~~~----------------~~~~~~ 192 (365)
T TIGR00236 151 QAKDNLL--------------------RENVK--ADSIFVTGNTVIDALLTNVEIAYS----------------SPVLSE 192 (365)
T ss_pred HHHHHHH--------------------HcCCC--cccEEEeCChHHHHHHHHHhhccc----------------hhHHHh
Confidence 8765211 11333 779999999963222211110000 001112
Q ss_pred cCCCCCCCCCEEEEEc-ccc-ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCC
Q 005444 449 VGTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG 526 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vG-RL~-~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~ 526 (696)
++ .+++++++++ |.. ..||+..+++++.++.+..++++++++|++.. ...+ .+.+.++..+
T Consensus 193 ~~----~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~---~~~~~~~~~~ 255 (365)
T TIGR00236 193 FG----EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE---PLHKHLGDSK 255 (365)
T ss_pred cC----CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH---HHHHHhCCCC
Confidence 33 1234555544 543 35899999999999877678899999865432 0111 1334445667
Q ss_pred cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCCHHH
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQ 605 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d~e~ 605 (696)
+|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++ +|+++ +.|+++
T Consensus 256 ~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~ 323 (365)
T TIGR00236 256 RVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKEN 323 (365)
T ss_pred CEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHH
Confidence 899998 6667788889995 99999887 56689999999999996 778888998766 56666 479999
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
++++|.+++ .|++.+++|+.+...+. +..+++++++.+.+
T Consensus 324 i~~ai~~ll----~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 324 ITKAAKRLL----TDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHHH----hChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 999997766 79999988887663332 34556666665554
No 89
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.79 E-value=1.3e-17 Score=180.19 Aligned_cols=246 Identities=12% Similarity=0.103 Sum_probs=166.1
Q ss_pred CCC-eEEEEeCCCchH---HHHHH--hhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEE
Q 005444 291 GFP-DFIIGNYSDGNL---VASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 364 (696)
Q Consensus 291 ~~p-DvIh~h~~~~~l---~a~ll--a~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 364 (696)
.++ |+||.+++.... ...++ .++.|+|+|+++|+++......... + ...+...++.||.||
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~----------~---~~~~~~~~~~aD~iI 128 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY----------L---MKEEIDMLNLADVLI 128 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch----------h---hHHHHHHHHhCCEEE
Confidence 366 999998875421 12222 2344899999999986533211100 0 123567889999999
Q ss_pred eccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccc
Q 005444 365 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 444 (696)
Q Consensus 365 t~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~ 444 (696)
+.|+...+..++ .|+. ..++.++++..+.....+.
T Consensus 129 ~~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~----------------------- 163 (333)
T PRK09814 129 VHSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV----------------------- 163 (333)
T ss_pred ECCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc-----------------------
Confidence 999987653211 1332 4567666665433111000
Q ss_pred cccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 445 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 445 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
. ....++.|+|+|++.+.+++. ...++++|+|+|+|+. .+ ..
T Consensus 164 -----~--~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~------------~~---------~~ 205 (333)
T PRK09814 164 -----K--TPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPE------------DL---------EN 205 (333)
T ss_pred -----c--cccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCcc------------cc---------cc
Confidence 0 023456899999999543211 1236799999999976 11 34
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCC-----------CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA 593 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-----------~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~ 593 (696)
.++|.|+| .++.+++..+++. |+.+.+.. .-++|.++.|+||||+|||+++.++..++|+++.
T Consensus 206 ~~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~ 279 (333)
T PRK09814 206 SANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENG 279 (333)
T ss_pred CCCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCC
Confidence 56899999 7888999999985 54443321 1357899999999999999999999999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 005444 594 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSER 647 (696)
Q Consensus 594 ~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~ 647 (696)
+|++++ +.++++++|..+ +++.+++|++++++.. +++.-..++++
T Consensus 280 ~G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 280 LGFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred ceEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 999998 678888888652 4677899999999876 55554444333
No 90
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.79 E-value=2.6e-17 Score=191.96 Aligned_cols=342 Identities=13% Similarity=0.122 Sum_probs=233.1
Q ss_pred HHhCCCCeEEEEeCCCchHHHH-----HHhhc----------CCCcEEEEecCCCccC---CCCC-------------Cc
Q 005444 287 AELQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTK---YPDS-------------DI 335 (696)
Q Consensus 287 ~~~~~~pDvIh~h~~~~~l~a~-----lla~~----------~gip~v~t~H~l~~~~---~~~s-------------~~ 335 (696)
+.+..+||+||+|.+++++++. ++... .+.+.|+|.|+..... ++.. .+
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 3446789999999999988777 55321 1456899999975433 2210 11
Q ss_pred cHhhhhhhhh-c----cchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEec
Q 005444 336 YWKKFDEKYH-F----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS 410 (696)
Q Consensus 336 ~~~~~~~~y~-~----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIp 410 (696)
.+..+..... + ...+..-..++..|+.|.++|+-.-+-+++.+.. ...|.+....++.-|.
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceecee
Confidence 1111110000 0 0123345678999999999998764333332211 1123333345788999
Q ss_pred CCCcCCCCC-CCchHHH---------------------------HHhhhhc----chhhhcCC-----------cccccc
Q 005444 411 PGADMDIYF-PYSEKQK---------------------------RLTALHG----SIEQLLFD-----------PEQNDE 447 (696)
Q Consensus 411 nGvD~~~f~-p~~~~~~---------------------------r~~~~~~----~~~~~l~~-----------~~~~~~ 447 (696)
||||...|. |.....- .+.+.+. ++.+.+.. +...-.
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999998887 4321110 0000111 11111000 000000
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhcc----CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~----~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
..+...+++.++|+|+.|+..+|+.+.+++.+.++.+. ...++||+.|.+.. .|..-++.++.+.+++++..
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~ 544 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPE 544 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcC
Confidence 12444478889999999999999999999988877541 13599999998875 45566788889999998777
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECC-
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP- 600 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p- 600 (696)
..++|.|+- .. +..+.+.+-.++|++++||+ +|++|++-+-||.-|.+.+++-.|...|.. ++.|||.|.+
T Consensus 545 ~~~kVvfle----~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 545 FRGRIVFLE----DY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred CCCcEEEEc----CC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 788999985 22 44677776668999999999 999999999999999999999999999988 8899999988
Q ss_pred -----------CCHHHHHHHHHHHHH-hhhc-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 601 -----------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 601 -----------~d~e~la~~I~~~l~-~l~~-----dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
.|.+++.+.|.+.+. ...+ .|..|.+|.+++.+.+...|||.+++++|.+-+
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 566777777765443 2223 288899999999998888999999999998854
No 91
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.78 E-value=3.9e-17 Score=179.09 Aligned_cols=250 Identities=14% Similarity=0.131 Sum_probs=160.3
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+||++.+.+ +......+++.|+|+++..|.. .|...... . ....+.+|.++++|+
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCc
Confidence 45999999886532 3323344566799988765431 11100000 0 113567899999887
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
...+... + .| .++.++.|.+......+..... .++.
T Consensus 144 ~~~~~~~----~----------------~g-----~~~~~~G~p~~~~~~~~~~~~~-------------------~~~~ 179 (380)
T PRK00025 144 FEAAFYD----K----------------LG-----VPVTFVGHPLADAIPLLPDRAA-------------------ARAR 179 (380)
T ss_pred cCHHHHH----h----------------cC-----CCeEEECcCHHHhcccccChHH-------------------HHHH
Confidence 6443110 0 11 1255555554332211111111 1223
Q ss_pred cCCCCCCCCCEEE-EEc-ccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc-CC
Q 005444 449 VGTLSDRSKPIVF-SMA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KL 524 (696)
Q Consensus 449 ~g~l~~~~k~iIl-~vG-RL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L 524 (696)
+|+ ++++++|+ +.| |.... ++++.+++++..+.+..++++++++|+++. ..+.+.++++++ ++
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGL 246 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCC
Confidence 665 55666654 444 44444 457899999999877778899999987332 145566667666 55
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----------------CCCCcch
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAE 587 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-----------------~~gG~~E 587 (696)
. +.+.. +++..+|+ ++|++|.+| |.+.+|||+||+|+|++ +.++.++
T Consensus 247 ~--v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 E--VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred C--eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 3 54432 36788888 599999997 88889999999999987 5667778
Q ss_pred hhccCC--eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 588 IIEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 588 iI~dg~--~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
++.++. .+++.+..|++++++++.+++ .|++.+++|++++.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 887654 557778889999999997776 89999999999875444
No 92
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.76 E-value=7.2e-17 Score=175.55 Aligned_cols=250 Identities=14% Similarity=0.121 Sum_probs=166.2
Q ss_pred CCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
.+||+||+|... ..+.+.++++..|+|++++.|+... +.... .|... .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~~------------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEEN------------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchHH------------HHHHHHHhhhccCCCHH
Confidence 489999999744 3566788888899998876665321 10011 11110 11235678999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCC-cCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
..+... ..|++ ..++.+++|++ |...+.+...... ..++.
T Consensus 152 ~~~~l~--------------------~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRNLL--------------------QEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHHHH--------------------HcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 755211 12333 77899999985 5322211110000 00112
Q ss_pred cCCCCCCCCCEEEEEccccc---cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 005444 449 VGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 524 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~---~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L- 524 (696)
+++ ++++.++++.||+.. .||++.+++++.++.+. ++.+++.|++.. .+.+++.++++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 444 445567788999875 79999999999988643 566666666544 4577777888776
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccCCeEEEECC-CC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDP-YH 602 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg~~G~l~~p-~d 602 (696)
.++|+|+| .....++..+++ +||++|.||- | .+.|||+||+|+|+++. +...+.+.. |+.+.. .|
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~-~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~~~~ 323 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLK-NADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLVGTD 323 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHH-cCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEecCCC
Confidence 67899998 455678888888 4999999984 4 47899999999999964 445666644 443333 36
Q ss_pred HHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 603 PDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 603 ~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
+++++++|.+++ +|+..+..|
T Consensus 324 ~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 324 PEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred HHHHHHHHHHHh----cCchhhhcC
Confidence 899999997766 788777665
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.74 E-value=2.7e-16 Score=185.99 Aligned_cols=309 Identities=15% Similarity=0.153 Sum_probs=208.0
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-+|+.+..+++.++.++. ..++.+..|..+ |.++++. ...+...-...|-.||.|=+.|+..
T Consensus 231 ~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPF----Ps~Eifr--------~LP~r~elL~glL~aDlIGFqT~~y 298 (934)
T PLN03064 231 EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPF----PSSEIHR--------TLPSRSELLRSVLAADLVGFHTYDY 298 (934)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCC----CChHHHh--------hCCcHHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999888888887764 577888899653 3333221 1111122234688999999999887
Q ss_pred HhhcccccccccccccccccccceeecccccCC--CcEEEecCCCcCCCCCCCchH---HHHHhhhhcchhhhcCCcccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~--~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~~~~~l~~~~~~ 445 (696)
+...-...... -++-....++.... -++.+.|-|||.+.|...... ..+...+
T Consensus 299 ~rhFl~~c~rl--------Lg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l-------------- 356 (934)
T PLN03064 299 ARHFVSACTRI--------LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL-------------- 356 (934)
T ss_pred HHHHHHHHHHH--------hCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH--------------
Confidence 65332211110 00000011222222 246678999999888653221 1111111
Q ss_pred ccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeE--EEEE--eCccCCCCCcchHHHHHHHHHHHHHHH
Q 005444 446 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN--LVVV--AGYIDVNKSKDREEIAEIEKMHELMKT 521 (696)
Q Consensus 446 ~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~--LvIv--G~g~~~~~~~d~e~~~~~~~l~~li~~ 521 (696)
++.+ .++.+|++++||+..||+...+.||.++.+.+|+++ ++++ .... ....++..+...++.+++.+
T Consensus 357 r~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~~l~~~V~~~V~r 428 (934)
T PLN03064 357 KERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQKLTSQVHEIVGR 428 (934)
T ss_pred HHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHHHHHHHHHHHHHH
Confidence 1112 356799999999999999999999999877777653 4444 3211 11122333444555555554
Q ss_pred cCC-CCc-----EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC----cEEEcCCCCcchhhcc
Q 005444 522 YKL-DGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFATCHGGPAEIIEH 591 (696)
Q Consensus 522 ~~L-~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PVvat~~gG~~EiI~d 591 (696)
.+- .+. |.++. ..++.+++..+|+ .|||||+||..|||+++..|||+|+. ++|.|..+|.++.+
T Consensus 429 IN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L-- 502 (934)
T PLN03064 429 INGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL-- 502 (934)
T ss_pred HhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--
Confidence 331 112 44443 3588999999999 59999999999999999999999954 44459999999888
Q ss_pred CCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 592 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 592 g~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+..+++|+|.|.+++|++|.+++. .+++.++++.++.++++ ..+||..+++.+++-+
T Consensus 503 ~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 503 GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSEL 559 (934)
T ss_pred CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHH
Confidence 456999999999999999998873 48999999999999998 8899999999976643
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.70 E-value=2.8e-15 Score=170.09 Aligned_cols=169 Identities=12% Similarity=0.181 Sum_probs=146.4
Q ss_pred CCEEEEEc--cccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC---------
Q 005444 457 KPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------- 525 (696)
Q Consensus 457 k~iIl~vG--RL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~--------- 525 (696)
+..+++++ || +.|.++.+++++.+.....|++.|.+.|-+.+ ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 34577777 99 99999999999999998899999999998753 01245666777777666
Q ss_pred --------------------CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 526 --------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 526 --------------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
++|.|.|+++ ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899998433 4578899996 99999999999999 9999999999999 5667
Q ss_pred chhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 586 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 586 ~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
.++|.|+.||+++ +|.++++++|..+| .+++.|++++..+.+.+ ++||-+.++++|.++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 9999999999999 69999999998877 89999999999999998 899999999998775
No 95
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.67 E-value=4.3e-15 Score=165.28 Aligned_cols=328 Identities=14% Similarity=0.164 Sum_probs=183.8
Q ss_pred CCe-EEEEeCCCchHHHHHHhh-cCCCcEEEEecCCCccCCC---C-------CCccHhhhhhhhhccchhhhhHHhhhc
Q 005444 292 FPD-FIIGNYSDGNLVASLLAY-KMGITQCTIAHALEKTKYP---D-------SDIYWKKFDEKYHFSCQFTADLIAMNN 359 (696)
Q Consensus 292 ~pD-vIh~h~~~~~l~a~lla~-~~gip~v~t~H~l~~~~~~---~-------s~~~~~~~~~~y~~~~~~~~e~~a~~~ 359 (696)
++. +.|+|-|..+.-..++.+ ...+..|+|.|+.-..++. . ....+......+....+...|+.+...
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 444 448999998654444433 3467789999985332221 0 111233333344445556778899999
Q ss_pred CCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhh--
Q 005444 360 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ-- 437 (696)
Q Consensus 360 AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~-- 437 (696)
||...|+|+-.+.+.+..++ ...=.|+|||+|.+.|....+-.+.....++.|.+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999887664433221 22224789999998776554333222222223333
Q ss_pred --hcCCccccccccCCCCCCCCCEEEEEcccc-ccCChHHHHHHHHHhhcc----CCC---eEEEEEeCccCCCCCcchH
Q 005444 438 --LLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDRE 507 (696)
Q Consensus 438 --~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgi~~Llea~~~l~~~----~~~---~~LvIvG~g~~~~~~~d~e 507 (696)
.+++. +.+ ..++..+|++.||.. +.||+|.+++|++++... ..+ +-|+|+=... .+...|
T Consensus 279 ~~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve 348 (633)
T PF05693_consen 279 RGHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVE 348 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HH
T ss_pred HHHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHH
Confidence 33332 122 124556789999999 689999999999998531 122 2344543322 111111
Q ss_pred HHH----------------------------------------------------------------------HHHHHHH
Q 005444 508 EIA----------------------------------------------------------------------EIEKMHE 517 (696)
Q Consensus 508 ~~~----------------------------------------------------------------------~~~~l~~ 517 (696)
... ..+.+-.
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 111 1122222
Q ss_pred HHHHcCCC----Cc--EEEecc---ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchh
Q 005444 518 LMKTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 588 (696)
Q Consensus 518 li~~~~L~----~~--V~flG~---~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~Ei 588 (696)
.+++++|. ++ |.|... ..|.+-+-+.+.++. .+|+.|+||.||+||.|.+|+.++|+|+|+|+..|+...
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~-GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~ 507 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVR-GCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCW 507 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHH-HSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhc-cCceeeeccccccccCChHHHhhcCCceeeccchhHHHH
Confidence 33333432 22 444441 223444557788888 599999999999999999999999999999999999877
Q ss_pred hcc-----CCeEEEE-C--CCCHHHHHHHHHHHHHhhhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 589 IEH-----GASGFHI-D--PYHPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 589 I~d-----g~~G~l~-~--p~d~e~la~~I~~~l~~l~~-dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+.+ ...|+.| + ..+.++.++.|.+++..... +...+..+..++.+. .+..+|+.....|.+.|..
T Consensus 508 ~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 508 MQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHHCHHHHHHHHH
T ss_pred HHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHH
Confidence 753 3456654 3 34777888877777654444 556666666666544 5899999999999998764
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.60 E-value=2.2e-15 Score=140.35 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.3
Q ss_pred CCEEEEEccccccCChHHHHH-HHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Lle-a~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
-++|+++|++.+.|+++.+++ ++.++.+..|++.|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357999999999999999999 9999998889999999999765 23333 234899999
Q ss_pred ccCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 536 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.+ +++..+++. +|+++.|+. .++++++++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 44 589999995 999999985 67899999999999999999988 567777666678877 889999999998776
No 97
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=1.3e-12 Score=135.24 Aligned_cols=382 Identities=14% Similarity=0.115 Sum_probs=231.6
Q ss_pred HHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHH
Q 005444 205 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 284 (696)
Q Consensus 205 ~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~ 284 (696)
|..|++.|++|+ ++.-.-+ ...+.+...++++|+.+|--+..... ++.-..+ +..|...+.-.
T Consensus 33 A~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~----p~~~~l~-lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGG----PRVLFLP-LKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCC----chhhhhH-HHHHHHHHHHH
Confidence 446899999999 6532211 12334444567888887765432211 1111111 11222211111
Q ss_pred HHHHhCCCCeEEEEeCCCc---hHHHHHHhhcCCCcEEEEecCCCcc-CCCCCCccHhhhhhhhhccchhhhhHHhhhcC
Q 005444 285 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKT-KYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 360 (696)
Q Consensus 285 i~~~~~~~pDvIh~h~~~~---~l~a~lla~~~gip~v~t~H~l~~~-~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 360 (696)
+.-...+.||+|...++++ -.++.+.+...|.++++..|++..+ ....+......+ ..+....|...-+.|
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~l-----V~l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPL-----VRLVRWLEKYFGKLA 170 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCch-----HHHHHHHHHHhhccc
Confidence 1111156899999887765 3566677778899999999987543 110000000000 111123466777889
Q ss_pred CEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCC----CCCCchH----HHHHhhhh
Q 005444 361 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI----YFPYSEK----QKRLTALH 432 (696)
Q Consensus 361 D~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~----f~p~~~~----~~r~~~~~ 432 (696)
|.-+|+|....+...+.||-- +...-++.++. -+.+.+. |-+.... ..| ....
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi~------------ra~v~YDrPps------~~~~l~~~H~lf~~l~~d~~~f~ar-~~q~ 231 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGIN------------RAKVLYDRPPS------KPTPLDEQHELFMKLAGDHSPFRAR-EPQD 231 (444)
T ss_pred ccchhhHHHHHHHHHHhcCCc------------eeEEEecCCCC------CCCchhHHHHHHhhhccccchhhhc-cccc
Confidence 999999998877666666521 00000111111 0111111 1111110 000 0001
Q ss_pred cchhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhh-------ccCCCeEEEEEeCccCCCCCcc
Q 005444 433 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-------QLRELVNLVVVAGYIDVNKSKD 505 (696)
Q Consensus 433 ~~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~-------~~~~~~~LvIvG~g~~~~~~~d 505 (696)
+.++...|..-....-... ......++++.-...+..++..|++|+..-. ...|.+-++|.|.||.
T Consensus 232 ~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl------ 304 (444)
T KOG2941|consen 232 KALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL------ 304 (444)
T ss_pred chhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch------
Confidence 1122222222111000111 1233446777788999999999999987331 1246788889999988
Q ss_pred hHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeC--CC-CCCCcHHHHHHHHcCCcEEEcCC
Q 005444 506 REEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP--AF-YEAFGLTVVEAMTCGLPTFATCH 582 (696)
Q Consensus 506 ~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~P--S~-~E~fGltvlEAMa~GlPVvat~~ 582 (696)
.+++.+.|+++++.. |.+.- .....++....++ +||..|+- |. .=..|++|+....||+||+|-+.
T Consensus 305 ------kE~Y~~~I~~~~~~~-v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~f 373 (444)
T KOG2941|consen 305 ------KEKYSQEIHEKNLQH-VQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNF 373 (444)
T ss_pred ------hHHHHHHHHHhcccc-eeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCceeeecc
Confidence 678888899998864 55543 3677788888888 58887653 33 23579999999999999999999
Q ss_pred CCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 583 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 583 gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
..+.|+|++++||++|+ |.+++|+.+..++...-.|.+..+.+.+++++. +.+.|+...++..
T Consensus 374 kcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 374 KCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred hhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 99999999999999997 899999999999876667999999999999887 5677876655544
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.55 E-value=7.7e-13 Score=145.88 Aligned_cols=250 Identities=16% Similarity=0.117 Sum_probs=152.7
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+|++....+ ++.....++.+|+|+++.+ +.+-+ .|.... -+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~w-------aw~~~~-----------~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQVW-------AWRKWR-----------AKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcHh-------hcCcch-----------HHHHHHHHhHhhccCC
Confidence 45999999887644 5555568888999987544 11111 111110 1234568899999987
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
.+.+. +. .. ..+..++.|++............. .++.
T Consensus 148 ~e~~~-------------------~~-~~-----g~~~~~vGnPv~~~~~~~~~~~~~------------------~r~~ 184 (385)
T TIGR00215 148 FEKAF-------------------YQ-KK-----NVPCRFVGHPLLDAIPLYKPDRKS------------------AREK 184 (385)
T ss_pred CcHHH-------------------HH-hc-----CCCEEEECCchhhhccccCCCHHH------------------HHHH
Confidence 76441 11 00 134556777663322111011111 1223
Q ss_pred cCCCCCCCCCEEEEEc--cccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 005444 449 VGTLSDRSKPIVFSMA--RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 525 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vG--RL~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 525 (696)
+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.+.. ..+.+.++.++++..
T Consensus 185 lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~~ 251 (385)
T TIGR00215 185 LGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGPD 251 (385)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCCC
Confidence 665 66777776653 7776 7899999999999987778999877654322 134455666667666
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcc----------------hh
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPA----------------EI 588 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~----------------Ei 588 (696)
.+|.+.+. +...+|+ ++|++|.+| |.+.+|||+||+|+|.+ ...... .+
T Consensus 252 ~~v~~~~~--------~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG--------DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc--------hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 66776641 3556788 599999999 88888999999999987 222222 22
Q ss_pred hccCCeEE-EE-CCCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHH
Q 005444 589 IEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGL 632 (696)
Q Consensus 589 I~dg~~G~-l~-~p~d~e~la~~I~~~l~~l~~dp----~~~~~m~~~a~ 632 (696)
+.+..... ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~ 363 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFE 363 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHH
Confidence 22221111 11 2236788888886665 888 87777655443
No 99
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.40 E-value=1.9e-12 Score=112.96 Aligned_cols=92 Identities=26% Similarity=0.513 Sum_probs=85.7
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 553 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 553 vfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
+++.|+...+++..++|+||||+|+|+++.++..+++.++..++.++ |++++.++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46779999999999999999999999999999999999999999998 9999999997666 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 005444 633 KRIYERYTWKIYSERLMT 650 (696)
Q Consensus 633 ~~v~~~ysw~~~a~~l~~ 650 (696)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999998863
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.39 E-value=3.2e-11 Score=135.36 Aligned_cols=311 Identities=14% Similarity=0.129 Sum_probs=178.9
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-.|+....+++.++.++. ..++.+..|..++ .++. |+.......-...|-.||.|-..|+..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFP----s~e~--------fr~lP~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFP----SSEI--------FRCLPWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHH--------HTTSTTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCC----CHHH--------HhhCCcHHHHHHHhhcCCEEEEecHHH
Confidence 67899999999888888887764 5778888996433 2211 111111112234688999999999887
Q ss_pred Hhhcccccccccccccccccccceeec-ccccCC--CcEEEecCCCcCCCCCCCchH---HHHHhhhhcchhhhcCCccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVFD--PKFNIVSPGADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQ 444 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~-gi~~~~--~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~~~~~l~~~~~ 444 (696)
+...-+..... +.--+.... ++.... -++.+.|-|||.+.|...... ..+...+
T Consensus 209 ~~nFl~~~~r~-------lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l------------- 268 (474)
T PF00982_consen 209 ARNFLSCCKRL-------LGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL------------- 268 (474)
T ss_dssp HHHHHHHHHHH-------S-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH-------------
T ss_pred HHHHHHHHHHH-------cCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH-------------
Confidence 66433222111 000000000 122212 256778999998776432111 1111111
Q ss_pred cccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH
Q 005444 445 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 520 (696)
Q Consensus 445 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~ 520 (696)
++.++ .+..+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++... .+...+..+..+++.+++.
T Consensus 269 -~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~ps---r~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 269 -REKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPS---REDVPEYQELRREVEELVG 340 (474)
T ss_dssp -HHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B----STTSHHHHHHHHHHHHHHH
T ss_pred -HHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeecc---CccchhHHHHHHHHHHHHH
Confidence 11121 224799999999999999999999998866555 57788777532 2333445555666666665
Q ss_pred Hc----CCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCCCCcchhhc
Q 005444 521 TY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIE 590 (696)
Q Consensus 521 ~~----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----Vvat~~gG~~EiI~ 590 (696)
+. |-.+ -|.++. ..++.++++.+++ .||+++.+|..+|+.++..|+.+|-.+ +|.|...|.++.+.
T Consensus 341 ~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~-~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~ 416 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIY---RSLSFEELLALYR-AADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLS 416 (474)
T ss_dssp HHHHHH-BTTB-SEEEE----S---HHHHHHHHH-H-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-T
T ss_pred HHHhhcccCCceeEEEEe---cCCCHHHHHHHHH-hhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcC
Confidence 53 3222 255554 3678999999999 599999999999999999999999865 77899999988884
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 591 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 591 dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+ ..++|+|.|.+++|++|.++++ ..++.++..-+.-++++ ..+|-...++.+++-+
T Consensus 417 ~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 417 E--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp T--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred C--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 4 3589999999999999998874 56777777777777777 7889888888877643
No 101
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.34 E-value=2.4e-10 Score=127.09 Aligned_cols=312 Identities=13% Similarity=0.086 Sum_probs=207.7
Q ss_pred CCeEEEEeCCCchHHHHHHhhc-CCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.-|+|-+|+....+++..+.++ ...++.+..|.. +|.++++. .+- +...-...|-.+|.|=.-|+..
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiP----FPs~eifr-~LP-------~r~eil~glL~aDlIGFqt~~y 190 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIP----FPTPEIFN-ALP-------PHDELLEQLCDYDLLGFQTEND 190 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCC----CCChHHHh-hCC-------ChHHHHHHHHhCccceeCCHHH
Confidence 4489999999988888887665 346788888864 33333211 111 1112234678899999888877
Q ss_pred HhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchH--HHHHhhhhcchhhhcCCccccccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~--~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
+...-+.+...... ....+......| -.-++.+.|-|||.+.|...... ..+... .++.
T Consensus 191 ~rnFl~~~~~~lg~--~~~~~~~v~~~g---r~v~v~~~PigID~~~~~~~a~~~~~~~~~~--------------lr~~ 251 (474)
T PRK10117 191 RLAFLDCLSNLTRV--TTRSGKSHTAWG---KAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ--------------LKAE 251 (474)
T ss_pred HHHHHHHHHHHcCC--cccCCCeEEECC---eEEEEEEEECeEcHHHHHHHhhchHHHHHHH--------------HHHH
Confidence 65433322111000 000000000001 02257788999998877432211 111111 1111
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
+ .++.+|+.+.|||..||+..=++||.++.+.+| ++.|+-++.. +.+.-.+..+...++.+++.+.+-
T Consensus 252 ~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~~v~~~vg~INg 323 (474)
T PRK10117 252 L-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRHQLETEAGRING 323 (474)
T ss_pred c-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHHHHHHHHHHHHh
Confidence 2 356799999999999999999999999877666 4667767532 333344555566667776665332
Q ss_pred -CCc-----EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCCCCcchhhccCC
Q 005444 525 -DGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCHGGPAEIIEHGA 593 (696)
Q Consensus 525 -~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVvat~~gG~~EiI~dg~ 593 (696)
.+. |+++ ...++.+++..+|+ +|||++.++..+|+.|+..|+.+|-. +.|.|...|.++.+.
T Consensus 324 ~fg~~~w~Pv~y~---~~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~--- 396 (474)
T PRK10117 324 KYGQLGWTPLYYL---NQHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--- 396 (474)
T ss_pred ccCCCCceeEEEe---cCCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---
Confidence 122 3333 34688999999999 59999999999999999999999965 378899999998883
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 594 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 594 ~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
..++++|.|.+++|++|.+++. ..++.+++.-+..++.+ .++|....++.+++-+.
T Consensus 397 ~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 397 SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 3789999999999999998874 56777777777777777 78898888888877543
No 102
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.31 E-value=2e-11 Score=117.33 Aligned_cols=167 Identities=16% Similarity=0.126 Sum_probs=85.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccccccc
Q 005444 184 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 263 (696)
Q Consensus 184 p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 263 (696)
+..||.+.|+. +|+++|+++||+|+ |++....+..... ............
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~------------~~~~~~~~~~~~------ 58 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE------------LVKIFVKIPYPI------ 58 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST------------EEEE---TT-SS------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh------------ccceeeeeeccc------
Confidence 45799999999 66667799999999 8877654432111 011111111000
Q ss_pred ccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCcc--CCCCCCccHhhhh
Q 005444 264 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKFD 341 (696)
Q Consensus 264 wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~--~~~~s~~~~~~~~ 341 (696)
.....+.......+.+.+.+. +|||||+|.+.....+.+... ++|.|.+.|+.... ...........+.
T Consensus 59 ----~~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 59 ----RKRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp ----TSS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred ----ccccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhhh
Confidence 001111122333444555544 999999998766555444444 99999999986521 1100000111111
Q ss_pred hhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCC
Q 005444 342 EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 419 (696)
Q Consensus 342 ~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~ 419 (696)
. .......+.+|.+|++|...++...+ .|++ +.|+.|||||||.+.|.
T Consensus 130 ~--------~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 130 F--------RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp H--------CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH-
T ss_pred h--------hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHcC
Confidence 0 11233478999999999988763222 1333 78999999999998873
No 103
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.29 E-value=7.7e-09 Score=112.38 Aligned_cols=252 Identities=16% Similarity=0.185 Sum_probs=155.7
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
..+||+|++........+.+++..+|+|+++.-.+.-. ...|+ +..+.|+.|.+.-..
T Consensus 89 ~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank----------------~~~~~a~~V~~~f~~ 146 (357)
T COG0707 89 KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK----------------ILSKFAKKVASAFPK 146 (357)
T ss_pred HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH----------------HhHHhhceeeecccc
Confidence 45999999988887788888999999999876554322 12232 234456665543321
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
.. .+. .+.++.++-|.+..+... ......+. .
T Consensus 147 -~~------------------------~~~--~~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~ 178 (357)
T COG0707 147 -LE------------------------AGV--KPENVVVTGIPVRPEFEE-LPAAEVRK--------------------D 178 (357)
T ss_pred -cc------------------------ccC--CCCceEEecCcccHHhhc-cchhhhhh--------------------h
Confidence 00 011 145778888877766554 22221111 1
Q ss_pred CCCCCCCCCEEEEEcc-ccccCChHHHHH-HHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 450 GTLSDRSKPIVFSMAR-LDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 450 g~l~~~~k~iIl~vGR-L~~~Kgi~~Lle-a~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
+ ..++++|+.+|. ....+ +..++. +...+.+ ++.++..++... .+++...-.+++.
T Consensus 179 ~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G~~~------------~~~~~~~~~~~~~--- 236 (357)
T COG0707 179 G---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTGKND------------LEELKSAYNELGV--- 236 (357)
T ss_pred c---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcCcch------------HHHHHHHHhhcCc---
Confidence 1 125666666655 43333 444333 3333332 577776665533 3444444444444
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC--------cchhhccCCeEEEEC
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHID 599 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG--------~~EiI~dg~~G~l~~ 599 (696)
++..++.. ++..+|+. +|++|. -+-++|+.|..++|+|+|--..+. .+..+++.+.|..++
T Consensus 237 ~~v~~f~~------dm~~~~~~-ADLvIs----RaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~ 305 (357)
T COG0707 237 VRVLPFID------DMAALLAA-ADLVIS----RAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIR 305 (357)
T ss_pred EEEeeHHh------hHHHHHHh-ccEEEe----CCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEec
Confidence 77777533 48888884 999997 456799999999999999875443 344456666777777
Q ss_pred CCC--HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 005444 600 PYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 649 (696)
Q Consensus 600 p~d--~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~ 649 (696)
-.+ ++.+++.|.+++ ++|+..++|.+++++.. ..=.-+.+++.++
T Consensus 306 ~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 306 QSELTPEKLAELILRLL----SNPEKLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 554 778888887666 89999999999998764 2323344444443
No 104
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.25 E-value=4.1e-09 Score=114.94 Aligned_cols=248 Identities=15% Similarity=0.117 Sum_probs=139.9
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+.+||+||++....+..+.++++.+++|.++.-.+... . .+.++....+|.|+++-+.
T Consensus 89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~--------g--------------~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 89 KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP--------G--------------LANKIALRFASKIFVTFEE 146 (352)
T ss_pred hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc--------c--------------HHHHHHHHhhCEEEEEccc
Confidence 55999999988777777888999999997653322100 0 1223567788888764432
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
... +++ ..|+.++-|.+..+...+..... ++.+
T Consensus 147 ~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~~~--------------------~~~~ 179 (352)
T PRK12446 147 AAK-------------------------HLP--KEKVIYTGSPVREEVLKGNREKG--------------------LAFL 179 (352)
T ss_pred hhh-------------------------hCC--CCCeEEECCcCCcccccccchHH--------------------HHhc
Confidence 111 111 35777777777665432211111 1224
Q ss_pred CCCCCCCCCEEEEEccccccCChHH-HHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 528 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 528 (696)
|+ ++++++|+.+|.=--.+.+.. +.+++..+. ++++++++.|..+ .++ ....+ . ++
T Consensus 180 ~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~------------~~~---~~~~~--~-~~ 236 (352)
T PRK12446 180 GF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN------------LDD---SLQNK--E-GY 236 (352)
T ss_pred CC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch------------HHH---HHhhc--C-Cc
Confidence 54 566777766654322344533 334444443 2477766654322 111 11111 1 23
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC-----C----cchhhccCCeEEEEC
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-----G----PAEIIEHGASGFHID 599 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g-----G----~~EiI~dg~~G~l~~ 599 (696)
...++. .+++..+|+ +||++|.= +-+.|+.|++++|+|.|..... + .++.+.+.+.|..+.
T Consensus 237 ~~~~f~-----~~~m~~~~~-~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~ 306 (352)
T PRK12446 237 RQFEYV-----HGELPDILA-ITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY 306 (352)
T ss_pred EEecch-----hhhHHHHHH-hCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc
Confidence 344532 236788888 49999874 5688999999999999988442 1 233445555676665
Q ss_pred CC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 005444 600 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 651 (696)
Q Consensus 600 p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~l 651 (696)
.. +++.+++++.+++ .|++.+++ ++ +++.....++++.++
T Consensus 307 ~~~~~~~~l~~~l~~ll----~~~~~~~~---~~-----~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 307 EEDVTVNSLIKHVEELS----HNNEKYKT---AL-----KKYNGKEAIQTIIDH 348 (352)
T ss_pred hhcCCHHHHHHHHHHHH----cCHHHHHH---HH-----HHcCCCCHHHHHHHH
Confidence 32 4677777776655 78766432 21 334555555555443
No 105
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.24 E-value=1.3e-09 Score=130.28 Aligned_cols=312 Identities=13% Similarity=0.130 Sum_probs=206.1
Q ss_pred eEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHh
Q 005444 294 DFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 372 (696)
Q Consensus 294 DvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 372 (696)
|+|-.|+....+++.++.++. ..++.+..|..+ |.++++. .......-...|-.||.|=..|+..+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPF----Ps~eifr--------~LP~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYK--------TLPIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCC----CChHHHh--------hCCcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999999888888887664 577888899653 3333221 111112223478899999999988775
Q ss_pred hcccccccccccccccccccceeecccccCCC--cEEEecCCCcCCCCCCCch---HHHHHhhhhcchhhhcCCcccccc
Q 005444 373 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMDIYFPYSE---KQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 373 ~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~--k~~VIpnGvD~~~f~p~~~---~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
..-......-.. ..... +...++.+... ++.+.|-|||...|..... ...+...+ ++
T Consensus 271 ~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l--------------~~ 332 (854)
T PLN02205 271 HFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKEL--------------IK 332 (854)
T ss_pred HHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHH--------------HH
Confidence 433221110000 00000 00012222222 5678899999887643221 11122111 11
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCC----eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc-
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY- 522 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~----~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~- 522 (696)
.++ ++++.+|+.+.|+|..||+..=+.||.++.+.+|. +.|+-+... ..+.-.+..+...++.+++.+.
T Consensus 333 ~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~p---sr~~~~~y~~~~~ev~~~v~rIN 406 (854)
T PLN02205 333 QFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANP---ARGKGKDVKEVQAETHSTVKRIN 406 (854)
T ss_pred Hhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecC---CCcccHHHHHHHHHHHHHHHHHH
Confidence 122 24678999999999999999999999998777765 466666543 2233344555566666666653
Q ss_pred ---CCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-------------------cEE
Q 005444 523 ---KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-------------------PTF 578 (696)
Q Consensus 523 ---~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-------------------PVv 578 (696)
|-.+ -|+++- ..++..|+..+|+ +||+++.++..+|+.|+..|+.+|-. ..|
T Consensus 407 ~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLi 482 (854)
T PLN02205 407 ETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLV 482 (854)
T ss_pred hhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccccccccccCCCCceE
Confidence 2222 255553 3678999999999 59999999999999999999999854 377
Q ss_pred EcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 579 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 579 at~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
.|...|.+..+. ..++|+|.|.+++|++|.+++. ..++.++..-+.-++++ .+++-...++.++.-.
T Consensus 483 LSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~l 549 (854)
T PLN02205 483 VSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYWARSFLQDL 549 (854)
T ss_pred eeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHH
Confidence 788888887772 3789999999999999998874 56666666666667777 7788888888776543
No 106
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.24 E-value=3.1e-09 Score=117.90 Aligned_cols=318 Identities=14% Similarity=0.097 Sum_probs=203.9
Q ss_pred CCeEEEEeCCCchHHHHHHhhcC-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 370 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 370 (696)
.=|+|-.|+....+++..+..+. ..++.+..|..++. +.+.. -..+...-.-.+-.+|+|-..++..
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs----sEvfr--------~lP~r~eIl~gll~~dligFqt~~y 214 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS----SEVFR--------CLPWREEILEGLLGADLIGFQTESY 214 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC----HHHHh--------hCchHHHHHHHhhcCCeeEecCHHH
Confidence 33999999999888888877664 36688888875432 22111 1111111123577899999988877
Q ss_pred Hhhcccccccccccccccccccceee-cccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcchhhhcCCcccccccc
Q 005444 371 IAGTKNTVGQYESHTAFTLPGLYRVV-HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 449 (696)
Q Consensus 371 ~~~~k~~v~qy~~~~~~~~p~l~~~~-~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~~ 449 (696)
+...-+...+... ++ +...+. +|.+-...++..+|=|||...|...........+ ..++.+ .+
T Consensus 215 ~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~-~~el~~----------~~ 278 (486)
T COG0380 215 ARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEK-VLELKA----------EL 278 (486)
T ss_pred HHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhH-HHHHHH----------Hh
Confidence 6644333322110 00 000011 1111012356678999998766533211110000 001111 11
Q ss_pred CCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC-C
Q 005444 450 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-L 524 (696)
Q Consensus 450 g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L 524 (696)
..++.+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++.... ..-++.+.....+.+++.+.+ .
T Consensus 279 ----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~~~~i~~~V~rIN~~ 351 (486)
T COG0380 279 ----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQALRLQIEELVGRINGE 351 (486)
T ss_pred ----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 2348899999999999999999999999986665 466776665433 122233344555555555432 2
Q ss_pred CCcEEEec--cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCCCCcchhhccCCeEEEE
Q 005444 525 DGQFRWIA--AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHI 598 (696)
Q Consensus 525 ~~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVvat~~gG~~EiI~dg~~G~l~ 598 (696)
.+.+.|.. +....++..+++.+++ .+|+++.+++-+|+.++..|+.+|- -|.|-|...|.+..+.+ .+++
T Consensus 352 fG~~~~~Pv~~l~~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV 427 (486)
T COG0380 352 FGSLSWTPVHYLHRDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV 427 (486)
T ss_pred cCCCCcceeEEEeccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE
Confidence 23333322 1224678899999999 5999999999999999999999984 58888998888887744 7999
Q ss_pred CCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 599 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 599 ~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
+|.|.+++|++|..++. ..++.+++.-+.-++.+ .++|-...+..+++-+
T Consensus 428 NP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 428 NPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred CCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 99999999999998874 67777776666667676 7778888887765543
No 107
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.23 E-value=1.6e-11 Score=116.02 Aligned_cols=160 Identities=18% Similarity=0.254 Sum_probs=84.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccc
Q 005444 187 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 266 (696)
Q Consensus 187 GG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wis 266 (696)
||.+.|+. +|+++|.++||+|+ |+|...+... .... ..++.+.++|+......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchh------
Confidence 89999999 66777799999999 8886643321 1111 23688888887654210
Q ss_pred cCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhc
Q 005444 267 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 346 (696)
Q Consensus 267 r~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~ 346 (696)
...+ .+...+.+.+ .....+||+||+|++..++++.++++..++|+|+++|+...... ..|. ...+
T Consensus 54 -~~~~----~~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~--~~~~-- 119 (160)
T PF13579_consen 54 -LRLL----RFLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWK--RRLY-- 119 (160)
T ss_dssp -GGHC----CHHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HH--HHHH--
T ss_pred -hhhH----HHHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchh--hHHH--
Confidence 0011 1222233333 22367999999999766677777766789999999997532111 1111 1111
Q ss_pred cchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCC
Q 005444 347 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 412 (696)
Q Consensus 347 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnG 412 (696)
...+...++.||.|+++|+..++...+ .|+ ...|+.|||||
T Consensus 120 ---~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~--~~~ri~vipnG 160 (160)
T PF13579_consen 120 ---RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGV--PPDRIHVIPNG 160 (160)
T ss_dssp ---HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred ---HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCC--CCCcEEEeCcC
Confidence 123667899999999999987763211 233 37899999998
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.22 E-value=1.7e-09 Score=120.45 Aligned_cols=135 Identities=13% Similarity=0.135 Sum_probs=107.0
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcccc
Q 005444 473 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 552 (696)
Q Consensus 473 ~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aad 552 (696)
+..+++++++.+..|+++|-| |.+.+ ...+|.++ +++ ++.+.+.|+.. ..+-.++. .||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~-~~d 349 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT-----QKIQELYQ-TCD 349 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHH-hcc
Confidence 899999999998889999999 66544 12577777 666 66677776433 34556666 499
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCC-CCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q 005444 553 AFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 631 (696)
Q Consensus 553 vfV~PS~~E~fGltvlEAMa~GlPVvat~~-gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a 631 (696)
+++-.|..|+|++++.||++.|+|+|+.+. -|+.+++.+ |.+++.+|+++++++|.+++ .||+.+++.-..-
T Consensus 350 lyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q 422 (438)
T TIGR02919 350 IYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQ 422 (438)
T ss_pred EEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 999999999999999999999999999854 366788866 88999999999999998877 8998776654444
Q ss_pred HHHH
Q 005444 632 LKRI 635 (696)
Q Consensus 632 ~~~v 635 (696)
++.+
T Consensus 423 ~~~a 426 (438)
T TIGR02919 423 REHA 426 (438)
T ss_pred HHHh
Confidence 4443
No 109
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.08 E-value=5.3e-10 Score=115.76 Aligned_cols=184 Identities=14% Similarity=0.093 Sum_probs=101.9
Q ss_pred EEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCcc-ccceeee--
Q 005444 165 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERV-- 241 (696)
Q Consensus 165 rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~-~~~~e~i-- 241 (696)
||++||....|- -.+||...++. .|+++|+++||+|. |+++.+........ .......
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999988752 47899999999 66666799999999 99888643211100 0000000
Q ss_pred --------c----------CCCceEEEEecccCcccccccccccCCCcc-------c-HHHHH--HHHHHHHHHHhCCCC
Q 005444 242 --------S----------GTEHTHILRVPFRSEKGILRQWISRFDVWP-------Y-LETFT--EDVGSEITAELQGFP 293 (696)
Q Consensus 242 --------~----------~~~~v~I~rvp~~~~~~~~~~wisr~~i~p-------~-l~~f~--~~~~~~i~~~~~~~p 293 (696)
. ..+++.++.+.... +.+|..++. . ..+|+ ..+..++...+..+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0 00133333332211 223444441 1 22332 223333333345699
Q ss_pred eEEEEeCCCchHHHHHHhhcC-------CCcEEEEecCCCccCCCC-C-----CccHhh--hhhhhhccchhhhhHHhhh
Q 005444 294 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPD-S-----DIYWKK--FDEKYHFSCQFTADLIAMN 358 (696)
Q Consensus 294 DvIh~h~~~~~l~a~lla~~~-------gip~v~t~H~l~~~~~~~-s-----~~~~~~--~~~~y~~~~~~~~e~~a~~ 358 (696)
||||||+|.+++++.+++... ++|+|+|+|++....... . .+.+.. ....+.+...+...+..+.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999998876 599999999975543211 1 111111 1112223334455668899
Q ss_pred cCCEEEeccHHHHhhc
Q 005444 359 NADFIITSTYQEIAGT 374 (696)
Q Consensus 359 ~AD~IIt~S~~~~~~~ 374 (696)
.||.|+|+|+..+.+.
T Consensus 215 ~AD~v~TVS~~Ya~Ei 230 (245)
T PF08323_consen 215 YADKVTTVSPTYAREI 230 (245)
T ss_dssp HSSEEEESSHHHHHHT
T ss_pred hcCEeeeCCHHHHHHH
Confidence 9999999999987643
No 110
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.07 E-value=3.3e-08 Score=109.42 Aligned_cols=124 Identities=15% Similarity=0.058 Sum_probs=82.1
Q ss_pred CCCCCEEEEEccccc---cCChHHHHHHHHHhhccCCCeEEE-EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 005444 454 DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 529 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~---~Kgi~~Llea~~~l~~~~~~~~Lv-IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 529 (696)
+.+++++++.|.... .+-...+++++..+ +.+++ .+|.... . . ..+.++|.
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~------------~-~-------~~~~~~v~ 291 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL------------G-A-------EDLPDNVR 291 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc------------c-c-------cCCCCceE
Confidence 345567788888754 23344555665543 34544 4444332 0 0 24567899
Q ss_pred EeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEECCC--CH
Q 005444 530 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HP 603 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~p~--d~ 603 (696)
+.+ .++..++ +. .+|++|.- +-..|+.||+++|+|+|....++ .++.++..+.|..+++. +.
T Consensus 292 ~~~----~~p~~~l---l~-~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~ 359 (401)
T cd03784 292 VVD----FVPHDWL---LP-RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA 359 (401)
T ss_pred EeC----CCCHHHH---hh-hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCH
Confidence 998 4555554 45 59999963 44589999999999999986655 35556666778877765 67
Q ss_pred HHHHHHHHHHH
Q 005444 604 DQAAELMADFF 614 (696)
Q Consensus 604 e~la~~I~~~l 614 (696)
+++++++.+++
T Consensus 360 ~~l~~al~~~l 370 (401)
T cd03784 360 ERLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHHh
Confidence 88888887765
No 111
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.98 E-value=9.8e-09 Score=100.84 Aligned_cols=177 Identities=19% Similarity=0.212 Sum_probs=115.6
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeec
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 242 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~ 242 (696)
|.||+||+..|.|.. .||.|.++. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 358999999999854 599999999 88888999999999 9987632211 1 11
Q ss_pred CCCceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHH-----HHhCCCCeEEEEeCCC-chHHHHHHhh--cC
Q 005444 243 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT-----AELQGFPDFIIGNYSD-GNLVASLLAY--KM 314 (696)
Q Consensus 243 ~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~-----~~~~~~pDvIh~h~~~-~~l~a~lla~--~~ 314 (696)
...+++++.+|.....+ +..+.-++...+. +.-+.+.|||+.+... ++.+..++.+ ..
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 22468999988753211 1122212211111 1112357899987766 4555555543 34
Q ss_pred CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHHhhcccccccccccccccccccce
Q 005444 315 GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYR 394 (696)
Q Consensus 315 gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~ 394 (696)
|.|+++..|+++..+ .+|..+..+|. ...|+++.+.||.+|+-|....+..++. |
T Consensus 118 g~~v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~---y------------- 172 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER---Y------------- 172 (185)
T ss_pred CCcEEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH---c-------------
Confidence 779999999986533 35655555443 2468889999999999998765432221 1
Q ss_pred eecccccCCCcEEEecCCCc
Q 005444 395 VVHGIDVFDPKFNIVSPGAD 414 (696)
Q Consensus 395 ~~~gi~~~~~k~~VIpnGvD 414 (696)
+ ..+..+||+|.|
T Consensus 173 -----~--~~~s~~IaYGad 185 (185)
T PF09314_consen 173 -----G--RKKSTFIAYGAD 185 (185)
T ss_pred -----C--CCCcEEecCCCC
Confidence 1 378899999987
No 112
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.97 E-value=5.4e-07 Score=99.63 Aligned_cols=112 Identities=17% Similarity=0.186 Sum_probs=74.8
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhccCCeEEEEC
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 599 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~dg~~G~l~~ 599 (696)
+.++|.+.+ .++..+ ++. .+|++|..+ | ..|+.||+++|+|+|+....+ ..+.+.+.+.|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898887 455444 455 599999763 2 358999999999999974443 334455666787776
Q ss_pred CC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 005444 600 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 652 (696)
Q Consensus 600 p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly 652 (696)
.. ++++++++|.+++ .|++.++.+.+-+ +.+...-.-+..++.++++.
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l~-~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKMR-AEIREAGGARRAADEIEGFL 390 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHHH-HHHHHcCCHHHHHHHHHHhh
Confidence 43 5788888887766 7888766664433 33334456666666666553
No 113
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.87 E-value=6.4e-07 Score=99.31 Aligned_cols=163 Identities=14% Similarity=0.223 Sum_probs=104.9
Q ss_pred EEEEEcccc--ccCChHHHHHHHHHhhccCCCeEEEEEe-CccCCCCCcchHHHHHHHHHHHHHHHcCCC----------
Q 005444 459 IVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD---------- 525 (696)
Q Consensus 459 iIl~vGRL~--~~Kgi~~Llea~~~l~~~~~~~~LvIvG-~g~~~~~~~d~e~~~~~~~l~~li~~~~L~---------- 525 (696)
+++..|.-. ..+++..+++++..+.+. +++.+++.- ++.+ .+.+.+..++.+..
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~~~~~ 274 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSEDQTS 274 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCccccch
Confidence 444455442 256788999999999755 678887665 4443 34455555544443
Q ss_pred ----CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc---chhhccC----Ce
Q 005444 526 ----GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEHG----AS 594 (696)
Q Consensus 526 ----~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~---~EiI~dg----~~ 594 (696)
+++.+..+ ..+++.+++ +||++|..| |.+..|++++|+|+|.....+. ..+.+.. ..
T Consensus 275 ~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~ 342 (396)
T TIGR03492 275 LFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGG 342 (396)
T ss_pred hhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCC
Confidence 22444432 346788888 599999874 5556999999999999875443 2222321 24
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 595 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 595 G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
+..+...+++.+++.+.+++ .|++.+++|.+++++...+....+.+++.+.+
T Consensus 343 ~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 343 SVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred EEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 45555667888888887665 89999888886565554344555555555443
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.83 E-value=5.1e-07 Score=96.60 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=79.9
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+.+.+++++|..+.. .++++++.+ ++..++++|.... + .-.++|++.++
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~---------------------~-~~~~ni~~~~~- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA---------------------D-PRPGNIHVRPF- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc---------------------c-ccCCCEEEeec-
Confidence 456689999988775 666776654 5788888876532 0 11568998863
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcH-HHHHHHHcCCcEEEcCCCCcc------hhhccCCeEEEECCC--CHHH
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGL-TVVEAMTCGLPTFATCHGGPA------EIIEHGASGFHIDPY--HPDQ 605 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGl-tvlEAMa~GlPVvat~~gG~~------EiI~dg~~G~l~~p~--d~e~ 605 (696)
...++.++|+. ||++|.-+ |. |+.||+++|+|++.-...+.. +.++..+.|..+++. +++.
T Consensus 240 ----~~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 240 ----STPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred ----ChHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 23578899995 99999752 44 599999999999998765533 333455567776543 5677
Q ss_pred HHHHHH
Q 005444 606 AAELMA 611 (696)
Q Consensus 606 la~~I~ 611 (696)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777663
No 115
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.77 E-value=6.8e-06 Score=89.10 Aligned_cols=156 Identities=15% Similarity=0.176 Sum_probs=115.0
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC-----------
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD----------- 525 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~----------- 525 (696)
+++++..+. ...--+.+++++..+++.+|++.+++|=-.++ -.+.+.+++++.|+.
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS~~~~~~ 297 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRSQGDPPF 297 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeecCCCCCC
Confidence 788888887 22333457899999999999999999988776 367888899988773
Q ss_pred -CcEEEeccccccCChhHHHHHHHccccE-EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEEC
Q 005444 526 -GQFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHID 599 (696)
Q Consensus 526 -~~V~flG~~~~~v~~~el~~~la~aadv-fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~ 599 (696)
+.=.++| ...+|+..+|. .+|+ ||=-|+.+--|--++|+.++|+|||.- +.....+-+...+.|+.++
T Consensus 298 ~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~ 371 (419)
T COG1519 298 SDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE 371 (419)
T ss_pred CCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC
Confidence 1112343 25789999999 5888 665677766688899999999999996 3333344444556788887
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 637 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~ 637 (696)
|.+.++.++ +.+..|++.+++|++++...+.+
T Consensus 372 --~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 372 --DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred --CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHH
Confidence 566666666 34458899999999999988754
No 116
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.76 E-value=1.1e-06 Score=96.30 Aligned_cols=265 Identities=16% Similarity=0.166 Sum_probs=147.2
Q ss_pred CCCeEEEEeC-CCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 291 GFPDFIIGNY-SDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 291 ~~pDvIh~h~-~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
.+||+|.++. ....+.++++|..+++|+++ +|+-..+. +. .+...+ ...-+-||..+++++.
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~----~~----~eE~~r--------~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE----GA----IDESIR--------HAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC----CC----chHHHH--------HHHHHHHhhccCCCHH
Confidence 4899999887 44577889999999999874 44432211 00 111111 1223456777788877
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEec-CCCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS-PGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIp-nGvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
..+... .-|.+ +.++.++- +++|.-......... +..+.
T Consensus 155 ~~~~L~--------------------~eg~~--~~~i~~tG~~~iD~l~~~~~~~~~------------------~~~~~ 194 (365)
T TIGR03568 155 YRQRVI--------------------QMGED--PDRVFNVGSPGLDNILSLDLLSKE------------------ELEEK 194 (365)
T ss_pred HHHHHH--------------------HcCCC--CCcEEEECCcHHHHHHhhhccCHH------------------HHHHH
Confidence 654211 01222 45666664 466643222111111 11123
Q ss_pred cCCCCCCC-CCEEEEEcccc--ccCChHHHHHHHHHhhccCCCeEEEEEe--CccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 449 VGTLSDRS-KPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA--GYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 449 ~g~l~~~~-k~iIl~vGRL~--~~Kgi~~Llea~~~l~~~~~~~~LvIvG--~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
+|+ +++ +.+++.+-+-. +....+.+.+.+..+.+...++ +++. .++. +....+.+.++..+
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~--------~~~i~~~i~~~~~~-- 260 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAG--------SRIINEAIEEYVNE-- 260 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCC--------chHHHHHHHHHhcC--
Confidence 554 333 44445555433 3333344444444443332234 4443 2222 11122333333211
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCH
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 603 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~ 603 (696)
.++|.+++ +++..++..+++. |+++|--| +-.+.||.++|+|||+ .+.-.|.+..|.+++++ +.|+
T Consensus 261 -~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdS-----Sggi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~ 326 (365)
T TIGR03568 261 -HPNFRLFK----SLGQERYLSLLKN-ADAVIGNS-----SSGIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDK 326 (365)
T ss_pred -CCCEEEEC----CCChHHHHHHHHh-CCEEEEcC-----hhHHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCH
Confidence 45799998 7889999999996 99998532 2234899999999995 45678888888888878 5689
Q ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 005444 604 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 604 e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ 650 (696)
+++.+++.+++ +++.++.+ ......|-....++++.+
T Consensus 327 ~~I~~a~~~~~-----~~~~~~~~-----~~~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 327 EEIVKAIEKLL-----DPAFKKSL-----KNVKNPYGDGNSSERIIE 363 (365)
T ss_pred HHHHHHHHHHh-----ChHHHHHH-----hhCCCCCCCChHHHHHHH
Confidence 99999987633 44433332 111234655566666554
No 117
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.60 E-value=4.9e-07 Score=84.46 Aligned_cols=123 Identities=20% Similarity=0.207 Sum_probs=77.8
Q ss_pred HHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHHHH
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 282 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~ 282 (696)
++++.|+++|++|+ ++|..... +......++.+++++.... ..++++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 56667799999999 88874221 1111123678888764321 1344442 22 444
Q ss_pred HHHHHHhCCCCeEEEEeCCCc-hHHHHHHhhcCC-CcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcC
Q 005444 283 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 360 (696)
Q Consensus 283 ~~i~~~~~~~pDvIh~h~~~~-~l~a~lla~~~g-ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 360 (696)
+.+.+ .+||+||+|...+ ++++.++++..+ +|++++.|+..... .+ ...+ + +. ...+.+++.|
T Consensus 68 k~ik~---~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~-~~~~-~---~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKK---EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SS-KKKK-L---KK-----FIIKFAFKRA 132 (139)
T ss_pred HHhcc---CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CC-chHH-H---HH-----HHHHHHHHhC
Confidence 44443 4899999999887 788888888888 99999999864311 11 1111 0 11 1345689999
Q ss_pred CEEEecc
Q 005444 361 DFIITST 367 (696)
Q Consensus 361 D~IIt~S 367 (696)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 118
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.55 E-value=1.1e-05 Score=87.00 Aligned_cols=69 Identities=13% Similarity=0.098 Sum_probs=51.7
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcch------hhccCCeEEEE
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 598 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~E------iI~dg~~G~l~ 598 (696)
.+++.+.++ .+ .++..+++. ||++|.-+- ..++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~----~~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRI----TT-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEEC----Ch-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 467888873 22 578888895 999998642 247999999999999987765333 45666788888
Q ss_pred CCCCH
Q 005444 599 DPYHP 603 (696)
Q Consensus 599 ~p~d~ 603 (696)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 87666
No 119
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.40 E-value=0.00025 Score=81.14 Aligned_cols=138 Identities=14% Similarity=0.005 Sum_probs=89.5
Q ss_pred CCEEEEEcccccc-----CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 457 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 457 k~iIl~vGRL~~~-----Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
.+++++.|..... +-+..+++|++++ + .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4788899987542 2345566666654 3 46666555422 00 2457789988
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC----CCcchhhccCCeEEEECCC--CHHH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHGASGFHIDPY--HPDQ 605 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~----gG~~EiI~dg~~G~l~~p~--d~e~ 605 (696)
+ .+|..++..- . .+++||.= |-..++.||+.+|+|+|+-.. ...+..++..+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 7 5665555421 1 37888863 445689999999999999743 3355666667788888764 5577
Q ss_pred HHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 606 AAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 606 la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
+.++|.+++ +||++++...+-+..
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 777776665 888877665544443
No 120
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.36 E-value=8.4e-07 Score=94.96 Aligned_cols=103 Identities=24% Similarity=0.394 Sum_probs=65.6
Q ss_pred HHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc-----CCeEEEE-C--CCCHHHHHHHHHHHHHhh
Q 005444 546 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH-----GASGFHI-D--PYHPDQAAELMADFFGKC 617 (696)
Q Consensus 546 ~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d-----g~~G~l~-~--p~d~e~la~~I~~~l~~l 617 (696)
+.+ .|.+.|+||.||++|.|..|.--+|+|-|.|+..|+.-.+++ ..-|+++ | -..+++-.+.+.+++...
T Consensus 497 FVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F 575 (692)
T KOG3742|consen 497 FVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEF 575 (692)
T ss_pred Hhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHH
Confidence 344 699999999999999999999999999999999987655532 2356654 2 124555555555554222
Q ss_pred hcCHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHH
Q 005444 618 KENPSHWKKISDGG-LKRIYERYTWKIYSERLMT 650 (696)
Q Consensus 618 ~~dp~~~~~m~~~a-~~~v~~~ysw~~~a~~l~~ 650 (696)
. ....++++-++. -++...-.+|+.+..-|.+
T Consensus 576 ~-~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 576 C-KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred H-HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 1 334444444333 3344445666665544433
No 121
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.35 E-value=3.9e-05 Score=81.09 Aligned_cols=98 Identities=14% Similarity=0.247 Sum_probs=70.2
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEE-EEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~Lv-IvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
+.+++++|..+..+....+++++.++. +++++. |+|.+.. ..++++++++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 458999999998776667788887643 344443 5565533 134566666553 47888873
Q ss_pred ccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC
Q 005444 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 583 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g 583 (696)
..++..+|+. ||++|.+ .|.|+.|++++|+|+|+....
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEec
Confidence 3468899995 9999984 579999999999999987553
No 122
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.32 E-value=2e-05 Score=87.88 Aligned_cols=185 Identities=12% Similarity=0.101 Sum_probs=119.3
Q ss_pred cccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc
Q 005444 443 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 522 (696)
Q Consensus 443 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~ 522 (696)
...|+.+|+ +++..++++..++. |=-...++++.++.+.-|+.+|++...... ..+.+.+.+++.
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNLF--KISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 345778998 67776677777654 455677888888877779999998875432 135788888899
Q ss_pred CCC-CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhc------cCCeE
Q 005444 523 KLD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE------HGASG 595 (696)
Q Consensus 523 ~L~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~------dg~~G 595 (696)
|+. ++|.|.+ ..+.++-.+.+.. +||++=|-.+-| |.|.+||+.+|+|||+-.....+.-+. =|-.-
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 986 7899988 5566777777774 999997744433 789999999999999875433332221 12223
Q ss_pred EEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 005444 596 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER--YTWKIYSERLMTLAGV 654 (696)
Q Consensus 596 ~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~--ysw~~~a~~l~~ly~~ 654 (696)
++.. |.++..+.-..+. .|++.++.+.++-++...+. |+-+.+++.+++.|+.
T Consensus 412 lIA~--s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 412 LIAD--SEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp GB-S--SHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred hcCC--CHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 3333 7888887775544 89999999999988776544 8899999999999875
No 123
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.30 E-value=6.5e-05 Score=81.89 Aligned_cols=250 Identities=15% Similarity=0.174 Sum_probs=133.9
Q ss_pred CCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCC-CccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHH
Q 005444 292 FPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHAL-EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 369 (696)
Q Consensus 292 ~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l-~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 369 (696)
+||+|..+.-.. .+.++++|..+++|++. +|+- -..... +. ..+...+ ...-+-||.-+++|+.
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~-~g----~~de~~R--------~~i~~la~lhf~~t~~ 132 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRT-EG----MPDEINR--------HAIDKLAHLHFAPTEE 132 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TT-SS----TTHHHHH--------HHHHHH-SEEEESSHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccC-CC----Cchhhhh--------hhhhhhhhhhccCCHH
Confidence 999999877443 67889999999999654 4442 111100 00 1122221 1234578999999988
Q ss_pred HHhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhcchhhhcCCccccccc
Q 005444 370 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 448 (696)
Q Consensus 370 ~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~~ 448 (696)
.++.+.. -|++ +.++.++-| ++|.-.. .. ....+.+. .
T Consensus 133 ~~~~L~~--------------------~G~~--~~rI~~vG~~~~D~l~~-----~~---~~~~~~~~-----------~ 171 (346)
T PF02350_consen 133 ARERLLQ--------------------EGEP--PERIFVVGNPGIDALLQ-----NK---EEIEEKYK-----------N 171 (346)
T ss_dssp HHHHHHH--------------------TT----GGGEEE---HHHHHHHH-----HH---HTTCC-HH-----------H
T ss_pred HHHHHHh--------------------cCCC--CCeEEEEChHHHHHHHH-----hH---HHHhhhhh-----------h
Confidence 7652211 1333 678887754 3332100 00 00000000 0
Q ss_pred cCCCC-CCCCCEEEEEccccc---cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC
Q 005444 449 VGTLS-DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 524 (696)
Q Consensus 449 ~g~l~-~~~k~iIl~vGRL~~---~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 524 (696)
.+++. .+++.++++.=|... ......+.+++..+.+. +++.+++.....+ .....+.+.++++
T Consensus 172 ~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~~~-- 238 (346)
T PF02350_consen 172 SGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLKKY-- 238 (346)
T ss_dssp HHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHTT---
T ss_pred HHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhccc--
Confidence 01111 234444555544332 34466788888888776 7898988887444 2244555555554
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHH-HHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvl-EAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d 602 (696)
++|+++. .++..++..+++. |+++|-= .| .+. ||.++|+|||.- +.|--.+.+..+.+-+ +. .|
T Consensus 239 -~~v~~~~----~l~~~~~l~ll~~-a~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~ 304 (346)
T PF02350_consen 239 -DNVRLIE----PLGYEEYLSLLKN-ADLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TD 304 (346)
T ss_dssp -TTEEEE--------HHHHHHHHHH-ESEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SS
T ss_pred -CCEEEEC----CCCHHHHHHHHhc-ceEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CC
Confidence 3899997 7888999999995 8888743 35 788 999999999998 5566677776665555 76 68
Q ss_pred HHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 603 PDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 603 ~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
.+++.++|.+++ .+++.+..+
T Consensus 305 ~~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 305 PEAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp HHHHHHHHHHHH----H-HHHHHHH
T ss_pred HHHHHHHHHHHH----hChHHHHhh
Confidence 999999997776 454444443
No 124
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.12 E-value=0.00021 Score=79.51 Aligned_cols=159 Identities=14% Similarity=0.066 Sum_probs=104.7
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+.+++.++.|..... .+.+-.++..+.+. ++++++..++.+ . ..-++++++...+
T Consensus 236 d~~~vyvslGt~~~~--~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~-- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA--VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD-- 290 (406)
T ss_pred CCCeEEEEcCCcccH--HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec--
Confidence 345567777776654 33333333444342 577777776522 0 1226778898887
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhccCCeEEEEC--CCCHHHHHH
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHID--PYHPDQAAE 608 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~dg~~G~l~~--p~d~e~la~ 608 (696)
.++..++.. .+|++|+. |--.++.||+..|+|+|+-. ....++.+++-+.|..+. .-+.+.+++
T Consensus 291 --~~p~~~~l~----~ad~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~ 360 (406)
T COG1819 291 --YVPQLELLP----RADAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRA 360 (406)
T ss_pred --CCCHHHHhh----hcCEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHH
Confidence 666666554 69999987 33458999999999999964 334567777888898877 578999999
Q ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 609 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 609 ~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
+|.+++ .|+..++...+... -..+.-.-+..++.++++.+
T Consensus 361 av~~vL----~~~~~~~~~~~~~~-~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 361 AVNEVL----ADDSYRRAAERLAE-EFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHHHh----cCHHHHHHHHHHHH-HhhhcccHHHHHHHHHHHHh
Confidence 997777 78877665544433 33355555556666666543
No 125
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.07 E-value=0.00076 Score=72.89 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=44.9
Q ss_pred HHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC---CcchhhccCCeEEEECCCCHHHHHHHHHHH
Q 005444 543 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADF 613 (696)
Q Consensus 543 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g---G~~EiI~dg~~G~l~~p~d~e~la~~I~~~ 613 (696)
...+++. ||++|- +-|....||...|+|+|.+-.| +.-+.+.+ .|+++...|++++.+.+...
T Consensus 242 ~~~Ll~~-a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 242 GLDLLYY-ADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHHHh-cCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHHh
Confidence 3456664 899994 4577789999999999987443 33344433 47888888999988866443
No 126
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.99 E-value=0.00016 Score=85.04 Aligned_cols=144 Identities=15% Similarity=0.072 Sum_probs=104.4
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHH---HHHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVE---CYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Lle---a~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
+.|+..+++...++++-|+...|.... ++. -+.+++... ....+++.|...+ .+..-+..++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 456666899999999999999999888 544 455554431 1255666665443 2344455566666666
Q ss_pred HH----cCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 KT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~~----~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+. ..+.+ +|.|+. ... =.+.+.+-.++||-.+-|. .|+.|.+=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~-VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYN-VSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCC-hHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 53 23445 688886 233 3455565557999998876 79999999999999999999999999999987
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
+.|+|+|-.
T Consensus 672 vG~eN~fiFG~ 682 (797)
T cd04300 672 VGEENIFIFGL 682 (797)
T ss_pred hCcCcEEEeCC
Confidence 789999953
No 127
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.99 E-value=0.00093 Score=73.21 Aligned_cols=143 Identities=21% Similarity=0.255 Sum_probs=88.9
Q ss_pred CCCCCEE-EEEcc-ccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 005444 454 DRSKPIV-FSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 530 (696)
Q Consensus 454 ~~~k~iI-l~vGR-L~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 530 (696)
++++++| +..|. -.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....+..-.+..
T Consensus 181 ~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~~~~~~~~~ 249 (373)
T PF02684_consen 181 DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEYPPDVSIVI 249 (373)
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhhCCCCeEEE
Confidence 5566654 44443 333 3556888999999999999999998875433 12234455555544333433
Q ss_pred eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhh----------------ccCC
Q 005444 531 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEII----------------EHGA 593 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI----------------~dg~ 593 (696)
. .++-+..++ +||+.+..| |.+.+|++..|+|.|.. ..+.+.-.+ -+..
T Consensus 250 ~--------~~~~~~~m~-~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 250 I--------EGESYDAMA-AADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred c--------CCchHHHHH-hCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 3 235677888 499888765 99999999999999986 433332222 1100
Q ss_pred --eEEEECCCCHHHHHHHHHHHHHhhhcCHHHHH
Q 005444 594 --SGFHIDPYHPDQAAELMADFFGKCKENPSHWK 625 (696)
Q Consensus 594 --~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~ 625 (696)
-=++-+.-+++.+++++.+++ .|++.++
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~ 345 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELL----ENPEKRK 345 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHh----cCHHHHH
Confidence 011223347888888886665 7776643
No 128
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.95 E-value=0.00012 Score=85.97 Aligned_cols=144 Identities=14% Similarity=0.114 Sum_probs=107.4
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHHH---HHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea---~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
..|...+++...++++-|+...|.... ++.. +.+++... ....+++.|...+ .|..-+..++.+..++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 347666899999999999999999888 5554 55554321 1366777765544 3455566677777777
Q ss_pred H----HcCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~----~~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+ ...+.+ +|.|+. ... -.+.+.+-.++|+-.+-|. .|+.|.+=+-||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~-vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYS-VSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCC-HHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 6 333445 788886 233 3456666557999998876 89999999999999999999999999999976
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
+.|||.|-.
T Consensus 685 vG~eN~~~fG~ 695 (815)
T PRK14986 685 VGEENIFIFGN 695 (815)
T ss_pred cCCCcEEEeCC
Confidence 889999954
No 129
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.91 E-value=0.0094 Score=67.61 Aligned_cols=140 Identities=13% Similarity=0.136 Sum_probs=79.1
Q ss_pred CCCCEEEEEccccc--cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 005444 455 RSKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 532 (696)
Q Consensus 455 ~~k~iIl~vGRL~~--~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 532 (696)
+...+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~ 329 (459)
T PLN02448 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP 329 (459)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec
Confidence 34567788887643 22244444555432 456776654321 1121211 23566566
Q ss_pred cccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEECC-----
Q 005444 533 AQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHIDP----- 600 (696)
Q Consensus 533 ~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~p----- 600 (696)
.++..++.. + .++ ||. -+--++++||+++|+|+|+- +....+..+.+. +.|+-+..
T Consensus 330 ----w~pQ~~iL~---h-~~v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 397 (459)
T PLN02448 330 ----WCDQLKVLC---H-SSVGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEE 397 (459)
T ss_pred ----cCCHHHHhc---c-CccceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccC
Confidence 566556554 2 444 664 23346899999999999996 444455556553 46666631
Q ss_pred --CCHHHHHHHHHHHHHhhhcCH-HHHHHHHHHHHH
Q 005444 601 --YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 633 (696)
Q Consensus 601 --~d~e~la~~I~~~l~~l~~dp-~~~~~m~~~a~~ 633 (696)
-+.+++++++.+++ .++ +..++|.+++.+
T Consensus 398 ~~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 398 TLVGREEIAELVKRFM----DLESEEGKEMRRRAKE 429 (459)
T ss_pred CcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 26678888887776 554 334445555443
No 130
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=97.76 E-value=0.00037 Score=81.83 Aligned_cols=144 Identities=16% Similarity=0.107 Sum_probs=103.0
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHHH---HHHhhccC----CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea---~~~l~~~~----~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
+.|+..+++...++++-|+...|.... ++.. +.+++..- ....+++.|...+ .|..-+..++.+..++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 456666899999999999999999888 5544 44454321 1346666665443 2334445555555555
Q ss_pred HHc----CCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~~~----~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|.+=+-+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 432 2445 688886 2333 455555557999998776 79999999999999999999999999999987
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
+.|+|+|-.
T Consensus 669 vG~eN~fiFG~ 679 (794)
T TIGR02093 669 VGAENIFIFGL 679 (794)
T ss_pred hCcccEEEcCC
Confidence 789999953
No 131
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.72 E-value=0.002 Score=69.62 Aligned_cols=199 Identities=19% Similarity=0.138 Sum_probs=114.0
Q ss_pred CCCCeEEEEeCC-CchHHHHHHhhcCC--CcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEec
Q 005444 290 QGFPDFIIGNYS-DGNLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 366 (696)
Q Consensus 290 ~~~pDvIh~h~~-~~~l~a~lla~~~g--ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 366 (696)
..+||++++-++ +.|+-....-|+.+ +|+|+.+-- |-+-|+.-. -....+..|++++.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P--------sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP--------SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc--------ceeeechhh-----------HHHHHHHhhHeeee
Confidence 569999987664 55765444455555 887765431 222333211 11346788999998
Q ss_pred cHHHHhhcccccccccccccccccccceeecccccCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 367 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 367 S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
=+.|.+ +|... .-..+.|-+ =+|.-.+.+.... .
T Consensus 144 lPFE~~-------------------~y~k~------g~~~~yVGHpl~d~i~~~~~r~~--------------------a 178 (381)
T COG0763 144 LPFEPA-------------------FYDKF------GLPCTYVGHPLADEIPLLPDREA--------------------A 178 (381)
T ss_pred cCCCHH-------------------HHHhc------CCCeEEeCChhhhhccccccHHH--------------------H
Confidence 877654 22111 112344433 2333222232221 2
Q ss_pred ccccCCCCCCCCC-EEEEEcc-ccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH-H
Q 005444 446 DEHVGTLSDRSKP-IVFSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-T 521 (696)
Q Consensus 446 ~~~~g~l~~~~k~-iIl~vGR-L~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~-~ 521 (696)
++.+|+ +.+++ +.+..|. -.+ .+.+..+++++.++.+++|+.++++--.... .+.+..... .
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 344676 44444 4455553 222 4566778889999998999999998876543 222222222 2
Q ss_pred cCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 522 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 522 ~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
......+... .++-+..++ +||+.+..| |.+.+|+|.+|+|.|++
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVA 289 (381)
T ss_pred cccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEE
Confidence 2221223332 345677777 489877654 99999999999999987
No 132
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.62 E-value=0.0043 Score=66.68 Aligned_cols=118 Identities=13% Similarity=0.136 Sum_probs=89.0
Q ss_pred CCcEEEeccccccCCh-hHHHHHHHccccEEEeCCC---CCC---CcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEE
Q 005444 525 DGQFRWIAAQTNRARN-GELYRYIADTKGAFVQPAF---YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 597 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~-~el~~~la~aadvfV~PS~---~E~---fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l 597 (696)
.+++..+|. ... ..+..++.. .++++.-++ .++ +.+-+.|+|+||.|-+++...+..-.+.+|..-++
T Consensus 236 ~~~~~yIg~----~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv 310 (373)
T COG4641 236 EPNVQYIGY----YNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIV 310 (373)
T ss_pred cchhhhhhc----cCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEE
Confidence 345666663 223 566666663 677665433 222 36789999999999999998888888888876666
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.. |..++.+++..++ ..++.++++.+.|.+++...||.+.-+.++++...
T Consensus 311 ~~--d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 311 YQ--DSKDLKEKLKYLL----NHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred ec--CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 54 8999999996655 89999999999999999999999887766666543
No 133
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.51 E-value=0.0034 Score=70.52 Aligned_cols=180 Identities=14% Similarity=0.160 Sum_probs=119.9
Q ss_pred cccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 005444 447 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 525 (696)
Q Consensus 447 ~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 525 (696)
...|+ +++..++++.++. .|-...++.-+.++.+.-|+-.|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 34787 5666555555554 3444444444444445569999999999865 23467899999999984
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-------CCCCcchhhc-cCCeEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGASGFH 597 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-------~~gG~~EiI~-dg~~G~l 597 (696)
.+++|.+ +.++++-...+. -+|+++=+--|-| +.|.+||+-+|+||++- ++|+ .++. -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhh
Confidence 7899998 677777777777 4999996644444 67899999999999874 3332 2222 2333334
Q ss_pred ECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 005444 598 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE--RYTWKIYSERLMTLAG 653 (696)
Q Consensus 598 ~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~--~ysw~~~a~~l~~ly~ 653 (696)
.+ +.++..++-..| -.|...+++.+..-.+.... -|+.+.++++++++|.
T Consensus 561 A~--s~~dYV~~av~~----g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVAF----GSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHHh----cccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 43 556666555443 36777777766555444433 4889999999999964
No 134
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=97.46 E-value=0.00099 Score=78.28 Aligned_cols=143 Identities=14% Similarity=0.049 Sum_probs=103.8
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHH-HHHH---HHHhhccCC-----CeEEEEEeCccCCCCCcchHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 518 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~-Llea---~~~l~~~~~-----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l 518 (696)
+.|+..+++...++++-|+...|.... ++.. +.++++. | ...+++.|...+ .|..-+..++.+..+
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~v 594 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIREN-PQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKV 594 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHH
Confidence 346666889999999999999999888 5554 4444432 2 256777665544 244445556666666
Q ss_pred HHHcC----CCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhc
Q 005444 519 MKTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 590 (696)
Q Consensus 519 i~~~~----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~ 590 (696)
++..+ +.+ +|.|+. ... -.+.+.+-.++|+-.+-|. .|+.|.+=+-+|.-|.++++|-.|...|+.+
T Consensus 595 a~~in~Dp~v~~~lkVVFle----nY~-VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e 669 (798)
T PRK14985 595 AEVINNDPLVGDKLKVVFLP----DYC-VSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAE 669 (798)
T ss_pred HHHhcCChhhCCceeEEEeC----CCC-hHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHH
Confidence 64432 344 688886 233 3455555557999998876 8999999999999999999999999999997
Q ss_pred c--CCeEEEECC
Q 005444 591 H--GASGFHIDP 600 (696)
Q Consensus 591 d--g~~G~l~~p 600 (696)
+ +.|||.|-.
T Consensus 670 ~vG~eN~f~fG~ 681 (798)
T PRK14985 670 QVGEENIFIFGH 681 (798)
T ss_pred HhCcCcEEEeCC
Confidence 6 789999954
No 135
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.43 E-value=0.0034 Score=73.34 Aligned_cols=144 Identities=16% Similarity=0.116 Sum_probs=110.6
Q ss_pred cCCCCCCCCCEEEEEccccccCChHHHHH----HHHHhh-ccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNMTGLVE----CYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 523 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi~~Lle----a~~~l~-~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 523 (696)
.|+-.+++...++++-|+...|..+..+. .+..++ ...|.+.+++.|...+ .|-.-+..++.+...++..+
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVIN 554 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhhc
Confidence 45555789999999999999998877653 444444 3345566666665544 35566677778888888877
Q ss_pred CCCcEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhc--cCCeEEEEC
Q 005444 524 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHID 599 (696)
Q Consensus 524 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~--dg~~G~l~~ 599 (696)
...+|.|+. ..+ -.+.+.+-.++||-.+.|. .|+.|.+-+-||.-|.++|+|-.|...|+.+ ++.|||.|-
T Consensus 555 ~~lkVvFl~----nYd-vslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP----NYD-VSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC----CCC-hhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 677899996 232 3456666558999888775 7999999999999999999999999999997 899999996
Q ss_pred CC
Q 005444 600 PY 601 (696)
Q Consensus 600 p~ 601 (696)
..
T Consensus 630 ~~ 631 (750)
T COG0058 630 ET 631 (750)
T ss_pred Cc
Confidence 43
No 136
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.42 E-value=0.033 Score=58.87 Aligned_cols=166 Identities=11% Similarity=0.069 Sum_probs=112.8
Q ss_pred CEEEEEcc-ccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 458 PIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 458 ~iIl~vGR-L~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
++.+-+|+ -|+-.+...+++++.+.. ..++++++.=+-+. ...+|++++.+..+++--.+++..+- +
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 44444554 566777777788777654 36788887766543 23578889999998887657888876 5
Q ss_pred cCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCCH--HHHHHHHHH
Q 005444 537 RARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHP--DQAAELMAD 612 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d~--e~la~~I~~ 612 (696)
.++.+|...+++. +|+.++-- +.+|+|+ ++=.+..|+||+.+ +++-..++.+.|.. ++++..+. ..+.++
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L~~~~v~e~--- 287 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDLDEDIVREA--- 287 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcccHHHHHHH---
Confidence 7889999999995 99988764 6789995 55689999999998 55556666655543 33443332 222221
Q ss_pred HHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 613 FFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 613 ~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
.+++...-++.+. |+-+.+.+.+.+++..
T Consensus 288 -----------~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 288 -----------QRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred -----------HHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 2223344445552 9999999999888764
No 137
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.38 E-value=0.05 Score=59.14 Aligned_cols=275 Identities=15% Similarity=0.186 Sum_probs=158.8
Q ss_pred CCCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
..+||+|..|.-- ..+.++++|...++|++..-=++-. .+.+|-. . ......=.-||.-+++|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE--E--------~NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE--E--------INRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH--H--------HHHHHHHHhhhhhcCChH
Confidence 4599999888643 3566789999999998765544311 1112110 0 001123345677778887
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCC-cCCCCCCCchHHHHHhhhhcchhhhcCCcccccc
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 447 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~~~ 447 (696)
..++.+ ...|++ +.++.|+-|-+ |.-.+. . .+ +.+ ......
T Consensus 155 ~ar~nL--------------------l~EG~~--~~~IfvtGnt~iDal~~~--~---~~-------~~~----~~~~~~ 196 (383)
T COG0381 155 IARKNL--------------------LREGVP--EKRIFVTGNTVIDALLNT--R---DR-------VLE----DSKILA 196 (383)
T ss_pred HHHHHH--------------------HHcCCC--ccceEEeCChHHHHHHHH--H---hh-------hcc----chhhHH
Confidence 765421 112333 56788887743 211110 0 00 000 000000
Q ss_pred ccCCCCCCCCCEEEEEcccccc-CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH-HHcCCC
Q 005444 448 HVGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKLD 525 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~-Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li-~~~~L~ 525 (696)
.+ .....++.++++.=|-... +++..+++++.++.++++++.++.--... ..+++.. +.++-.
T Consensus 197 ~~-~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 197 KG-LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNV 261 (383)
T ss_pred hh-hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCC
Confidence 00 1112334556666665544 89999999999999888777666544322 2334444 455656
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-CCCcchhhccCCeEEEECCCCHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~-~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
.+|.++. ++...+...++.. | .+++. ..|--.=||-..|+||++-+ ...-+|.++.| +-.++. .|.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHH
Confidence 6799986 7888888888885 5 33333 33556789999999999964 44456766443 445554 4678
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~ 653 (696)
.+.+++.+++ ++++..++|+... ..|.=...++++.++..
T Consensus 330 ~i~~~~~~ll----~~~~~~~~m~~~~-----npYgdg~as~rIv~~l~ 369 (383)
T COG0381 330 NILDAATELL----EDEEFYERMSNAK-----NPYGDGNASERIVEILL 369 (383)
T ss_pred HHHHHHHHHh----hChHHHHHHhccc-----CCCcCcchHHHHHHHHH
Confidence 8777776555 8998888886654 34444444555555443
No 138
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.31 E-value=0.024 Score=65.32 Aligned_cols=197 Identities=15% Similarity=0.086 Sum_probs=107.1
Q ss_pred CCCCeEEEEeC-CCchHHHHHHhhcCCC--cEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEec
Q 005444 290 QGFPDFIIGNY-SDGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 366 (696)
Q Consensus 290 ~~~pDvIh~h~-~~~~l~a~lla~~~gi--p~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 366 (696)
..+||++++-+ ++.|+-.+..+++.|+ |+++.+-- +-+-|+.- +- +..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsP--------qVWAWR~~--Ri---------kki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCP--------SIWAWRPK--RK---------TILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc--------cceeeCcc--hH---------HHHHHHhhhheec
Confidence 45999998654 5568866666677785 87765421 11222211 10 1234567888888
Q ss_pred cHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCC-CcCCCCCCCchHHHHHhhhhcchhhhcCCcccc
Q 005444 367 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 445 (696)
Q Consensus 367 S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~~~~~l~~~~~~ 445 (696)
=+-|.+ +|+. +| -++..|-+. +|.-...+.... .
T Consensus 369 fPFE~~-------------------~y~~-~g-----v~v~yVGHPL~d~i~~~~~~~~--------------------~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFKD-SP-----LRTVYLGHPLVETISSFSPNLS--------------------W 403 (608)
T ss_pred CccCHH-------------------HHHh-cC-----CCeEEECCcHHhhcccCCCHHH--------------------H
Confidence 777654 2221 22 234445433 343211121111 1
Q ss_pred ccccCCCCCCCCCEE-EEEcc-ccc-cCChHHHHHHHH--HhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH
Q 005444 446 DEHVGTLSDRSKPIV-FSMAR-LDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 520 (696)
Q Consensus 446 ~~~~g~l~~~~k~iI-l~vGR-L~~-~Kgi~~Llea~~--~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~ 520 (696)
++++|+ ++++++| +..|. -.+ .+.+..+++++. .+. ++.++++...... ..+.+.+.++
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~~~-----------~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSANPK-----------YDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCchh-----------hHHHHHHHHh
Confidence 233666 5455554 45553 333 456777888887 443 3577776433211 1234445454
Q ss_pred HcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 521 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 521 ~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..++ -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|+.
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 3321 0233331 112367778 599999765 99999999999999985
No 139
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.27 E-value=0.17 Score=56.78 Aligned_cols=97 Identities=13% Similarity=0.160 Sum_probs=57.3
Q ss_pred HHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC----CCcchhhcc
Q 005444 516 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH 591 (696)
Q Consensus 516 ~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~----gG~~EiI~d 591 (696)
+++.+.+.-..+++.+. +.....|+..+++. +|++|-.-. -+.+=|++.|+|+|+-.. -|+.+-+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444344455443 13345688889995 999985422 357889999999999643 3333333
Q ss_pred CCeEEEECC--CCHHHHHHHHHHHHHhhhcCHHHHHHH
Q 005444 592 GASGFHIDP--YHPDQAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 592 g~~G~l~~p--~d~e~la~~I~~~l~~l~~dp~~~~~m 627 (696)
|...++++. -+.+++.+++.+++ +|.+.+++.
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~~~ 399 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALNAR 399 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHHHHHH
Confidence 223344443 35667777775555 776655443
No 140
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=97.19 E-value=0.062 Score=62.97 Aligned_cols=144 Identities=14% Similarity=0.096 Sum_probs=92.1
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHH----HHHHHHhhcc----CCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHH
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGL----VECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 519 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~L----lea~~~l~~~----~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li 519 (696)
..|+..+++...++++-|+...|..... ++-+.++++. ...+.+++.|...+ .|..-++.++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 3455557888889999999999998883 3455555442 12367777776544 3445555666666655
Q ss_pred HH----cCCCC--cEEEeccccccCChhHHHHHHHccccEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCCCCcchhhcc
Q 005444 520 KT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 591 (696)
Q Consensus 520 ~~----~~L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVvat~~gG~~EiI~d 591 (696)
+. ..+.+ +|.|+. ..+ =.+.+.+-.++||-.+.|+ .|+.|.+-+=||.-|.+.++|-.|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYd-vslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYD-VSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-S-HHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCc-HHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 43 23444 688986 233 3566666668999999875 89999999999999999999999999999854
Q ss_pred --CCeEEEECC
Q 005444 592 --GASGFHIDP 600 (696)
Q Consensus 592 --g~~G~l~~p 600 (696)
..|+|+|-.
T Consensus 586 vG~eN~fiFG~ 596 (713)
T PF00343_consen 586 VGEENIFIFGL 596 (713)
T ss_dssp H-GGGSEEES-
T ss_pred cCCCcEEEcCC
Confidence 458888853
No 141
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.09 E-value=0.52 Score=53.91 Aligned_cols=77 Identities=10% Similarity=0.106 Sum_probs=45.7
Q ss_pred CcEEEeccccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhcc-CCeEEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHI 598 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~d-g~~G~l~ 598 (696)
.+++..+ .++..++. ++ +++ ||.= +--++++||+.+|+|+|+-. ..-.+..+.+ -..|+-+
T Consensus 345 ~g~~v~~----w~PQ~~iL---~h-~~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~ 412 (482)
T PLN03007 345 KGLIIRG----WAPQVLIL---DH-QATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSV 412 (482)
T ss_pred CCEEEec----CCCHHHHh---cc-Cccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEe
Confidence 4577766 55555544 43 444 6642 22468999999999999963 3334443322 1334433
Q ss_pred C----------CCCHHHHHHHHHHHH
Q 005444 599 D----------PYHPDQAAELMADFF 614 (696)
Q Consensus 599 ~----------p~d~e~la~~I~~~l 614 (696)
. .-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 413 GAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred ccccccccccCcccHHHHHHHHHHHh
Confidence 1 126778888887776
No 142
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.98 E-value=0.0039 Score=60.77 Aligned_cols=108 Identities=20% Similarity=0.314 Sum_probs=60.9
Q ss_pred HHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcC-CCcEEEE----ecCCCc-cCC-CCCCccHhhhhhhhhccchhhhh
Q 005444 281 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTI----AHALEK-TKY-PDSDIYWKKFDEKYHFSCQFTAD 353 (696)
Q Consensus 281 ~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~-gip~v~t----~H~l~~-~~~-~~s~~~~~~~~~~y~~~~~~~~e 353 (696)
+...+++. +..||||++|...+..+ .+..-+ ++|++.. .|+... ..+ ++... ......+...+-..-
T Consensus 56 a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~---~~~~~~~~r~rN~~~ 129 (171)
T PF12000_consen 56 AARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPP---SLDDRARLRMRNAHN 129 (171)
T ss_pred HHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCC---CHHHHHHHHHHhHHH
Confidence 34444444 77899999998776332 233434 5665532 121111 011 11111 112222222233445
Q ss_pred HHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCC
Q 005444 354 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 418 (696)
Q Consensus 354 ~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f 418 (696)
..++..+|..|+.|...+. +.|. .+.+|+.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~---------------~fP~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRS---------------QFPA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHH---------------hCCH---------HHHcCcEEeecccchhhc
Confidence 6788999999999988654 1232 236799999999999765
No 143
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.93 E-value=0.17 Score=54.28 Aligned_cols=127 Identities=11% Similarity=0.046 Sum_probs=88.6
Q ss_pred CEEEEEcc-ccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 458 PIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 458 ~iIl~vGR-L~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+.-+-+|+ -++..+.-.+++++.+.. ..++++++-=+-++ ...+|++++.+.++++--.+++..+- +
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~---e 252 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT---E 252 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---h
Confidence 44444444 566777777777776533 35688776544432 13467888988888876566787765 4
Q ss_pred cCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEE
Q 005444 537 RARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 598 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~ 598 (696)
.++.+|..++++. ||+.++.. +..|.|+ ++=.+.+|+||+.+.....-....+..--+++
T Consensus 253 ~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf 313 (360)
T PF07429_consen 253 FMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLF 313 (360)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEe
Confidence 7889999999995 99999987 5789985 66689999999999666665555444333344
No 144
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.84 E-value=1.3 Score=50.51 Aligned_cols=79 Identities=16% Similarity=0.112 Sum_probs=48.2
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcc-hhhccCCeEEEECC
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPA-EIIEHGASGFHIDP 600 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~-EiI~dg~~G~l~~p 600 (696)
+++.+.+ .++..++... . +.++||. -+--++++||+.+|+|+|+- |....+ .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~Fvt----H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVT----HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCcccc----cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 5555554421 1 2445653 12235899999999999996 333444 34555566776641
Q ss_pred -------------CCHHHHHHHHHHHH
Q 005444 601 -------------YHPDQAAELMADFF 614 (696)
Q Consensus 601 -------------~d~e~la~~I~~~l 614 (696)
-+.++++++|.+++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm 438 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLM 438 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHh
Confidence 26677888887766
No 145
>PLN02208 glycosyltransferase family protein
Probab=96.80 E-value=1.4 Score=49.90 Aligned_cols=66 Identities=6% Similarity=0.028 Sum_probs=44.5
Q ss_pred cHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEECC-----CCHHHHHHHHHHHHHhhhcCH-HHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP-----YHPDQAAELMADFFGKCKENP-SHWKKISDGGL 632 (696)
Q Consensus 564 GltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~p-----~d~e~la~~I~~~l~~l~~dp-~~~~~m~~~a~ 632 (696)
-++++||+++|+|+|+- +.......+.+ -+.|..++. -+.++++++|.+++ .++ +..+++.++++
T Consensus 339 ~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~ 414 (442)
T PLN02208 339 PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHT 414 (442)
T ss_pred chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 36899999999999996 44445555444 467887754 26678888887776 554 34555555554
Q ss_pred H
Q 005444 633 K 633 (696)
Q Consensus 633 ~ 633 (696)
+
T Consensus 415 ~ 415 (442)
T PLN02208 415 K 415 (442)
T ss_pred H
Confidence 3
No 146
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.71 E-value=1.4 Score=49.93 Aligned_cols=92 Identities=12% Similarity=0.146 Sum_probs=56.8
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEEC-
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 599 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~- 599 (696)
++....+ .++..++... . +.+.||.= +--++++||+++|+|+|+- |....+..+.+. +.|+.++
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 4555556 5666665542 1 13446642 2235899999999999996 444455555544 6787763
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
.-+.++++++|.+++ .+++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 336788888887776 5553 334444443
No 147
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.60 E-value=0.043 Score=59.86 Aligned_cols=91 Identities=16% Similarity=0.099 Sum_probs=57.0
Q ss_pred CCEEEEEccccc--cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 457 KPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 457 k~iIl~vGRL~~--~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+.+.++.|.-.. .+.+..+++++.++.+.. ..+++.|.. . .+.+.+...+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~-- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY-- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec--
Confidence 344555555331 355666778988887643 667776653 2 12334433322 2344443
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
+.+.+++ +||+.+..| |.+.+|++.+|+|.|..
T Consensus 228 -------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 -------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred -------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 3466777 499988754 88888999999999985
No 148
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.59 E-value=1.9 Score=48.84 Aligned_cols=91 Identities=13% Similarity=0.168 Sum_probs=57.4
Q ss_pred CcEEEeccccccCChhHHHHHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHI 598 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~ 598 (696)
+++.+.+ .++..++. ++ .. +||. -+-.++++||+++|+|+|+- +..-.+..+++. +.|+-+
T Consensus 317 ~~~~i~~----W~PQ~~iL---~H-~~v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v 384 (449)
T PLN02173 317 DKSLVLK----WSPQLQVL---SN-KAIGCFMT----HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRV 384 (449)
T ss_pred CceEEeC----CCCHHHHh---CC-CccceEEe----cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEE
Confidence 5677777 55555544 43 44 5553 23357999999999999996 444456666653 567766
Q ss_pred CCC------CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 599 DPY------HPDQAAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 599 ~p~------d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
... +.+++++++.+++ .+++ .+++.+++++
T Consensus 385 ~~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 385 KAEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGK 420 (449)
T ss_pred eecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHH
Confidence 421 5688888888777 4543 2444444443
No 149
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.50 E-value=0.56 Score=50.40 Aligned_cols=133 Identities=15% Similarity=0.156 Sum_probs=76.3
Q ss_pred CCCCEEEEEccccccCChHHH---HHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 455 RSKPIVFSMARLDHVKNMTGL---VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~L---lea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
.+..+++++|.=. -|-+.+ ++|+..+....+ .-++|.|.... .+...++...-.-.++|...
T Consensus 218 E~~~Ilvs~GGG~--dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVGGGA--DGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIF 282 (400)
T ss_pred ccceEEEecCCCh--hhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEE
Confidence 4466788888533 344333 333333333322 23566666655 33344444444445678888
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcch--hhc------cCCeEEEECCC--
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHIDPY-- 601 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~E--iI~------dg~~G~l~~p~-- 601 (696)
.+.. ++..+++ +|+..|.=+- =+|+.|-++.|+|.+.-..+-+.| .+. =|-..++ .|.
T Consensus 283 ~f~~------~~~~ll~-gA~~vVSm~G----YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe~l 350 (400)
T COG4671 283 EFRN------DFESLLA-GARLVVSMGG----YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPENL 350 (400)
T ss_pred Ehhh------hHHHHHH-hhheeeeccc----chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-CcccC
Confidence 7543 5777888 5888886532 368999999999999875554443 221 1222333 233
Q ss_pred CHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFF 614 (696)
Q Consensus 602 d~e~la~~I~~~l 614 (696)
.++.+|++|...+
T Consensus 351 t~~~La~al~~~l 363 (400)
T COG4671 351 TPQNLADALKAAL 363 (400)
T ss_pred ChHHHHHHHHhcc
Confidence 4667777775554
No 150
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.45 E-value=2.4 Score=48.41 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=64.8
Q ss_pred CcEEEeccccccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEEC
Q 005444 526 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID 599 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~ 599 (696)
.++++.+ .++..++. ++ +.++||.= +--++++||+++|+|+|+- +..-.+..+.+ -+.|..+.
T Consensus 343 ~g~~v~~----w~PQ~~vL---~h~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~ 411 (477)
T PLN02863 343 RGLVIRG----WAPQVAIL---SHRAVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVC 411 (477)
T ss_pred CCEEecC----CCCHHHHh---cCCCcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEec
Confidence 3466666 55554544 33 25677752 3345899999999999995 44445555443 36787663
Q ss_pred C-----CCHHHHHHHHHHHHHhhhcCHHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 005444 600 P-----YHPDQAAELMADFFGKCKENPSHWK---KISDGGLKRIYERYTWKIYSERLMTLAGVYG 656 (696)
Q Consensus 600 p-----~d~e~la~~I~~~l~~l~~dp~~~~---~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~ 656 (696)
. -+.+++++++.+++. ++++.++ ++++.+++-+.+.=|-....+++.+.+..+|
T Consensus 412 ~~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 412 EGADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred cCCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 2 256788888877652 3444332 2333333333333233334444444444443
No 151
>PLN00414 glycosyltransferase family protein
Probab=96.29 E-value=2.8 Score=47.47 Aligned_cols=86 Identities=6% Similarity=0.016 Sum_probs=55.2
Q ss_pred cCChhHHHHHHHccc--cEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhc-cCCeEEEECC-----CCHH
Q 005444 537 RARNGELYRYIADTK--GAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHIDP-----YHPD 604 (696)
Q Consensus 537 ~v~~~el~~~la~aa--dvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~-dg~~G~l~~p-----~d~e 604 (696)
.++..++.. + . +.||.= +--++++||+++|+|+|+- +..-.+..+. .-+.|..+.. -+.+
T Consensus 319 w~PQ~~vL~---h-~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 390 (446)
T PLN00414 319 WVEQPLILS---H-PSVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKE 390 (446)
T ss_pred cCCHHHHhc---C-CccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHH
Confidence 455555543 2 4 557742 3346899999999999996 3444555664 4567877742 3678
Q ss_pred HHHHHHHHHHHhhhcCH-HHHHHHHHHHHHH
Q 005444 605 QAAELMADFFGKCKENP-SHWKKISDGGLKR 634 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp-~~~~~m~~~a~~~ 634 (696)
++++++.+++ .++ +..+++.+++++.
T Consensus 391 ~i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 391 SLRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 8888887776 454 4455565655544
No 152
>PLN02210 UDP-glucosyl transferase
Probab=96.27 E-value=2.9 Score=47.47 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=46.3
Q ss_pred cCChhHHHHHHHccc--cEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEECC------CCH
Q 005444 537 RARNGELYRYIADTK--GAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP------YHP 603 (696)
Q Consensus 537 ~v~~~el~~~la~aa--dvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~p------~d~ 603 (696)
.++..++ +++ + ++||.= +--++++||+.+|+|+|+- +..-.+..+.+ -+.|..++. -+.
T Consensus 331 w~PQ~~i---L~h-~~vg~FitH----~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKI---LSH-MAISCFVTH----CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHH---hcC-cCcCeEEee----CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 5555554 443 4 366642 2224899999999999996 44445556655 468877742 367
Q ss_pred HHHHHHHHHHH
Q 005444 604 DQAAELMADFF 614 (696)
Q Consensus 604 e~la~~I~~~l 614 (696)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 88888887776
No 153
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.19 E-value=0.29 Score=52.58 Aligned_cols=109 Identities=15% Similarity=0.107 Sum_probs=67.1
Q ss_pred CCCCEEEEEccccccCCh--H---HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-
Q 005444 455 RSKPIVFSMARLDHVKNM--T---GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF- 528 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi--~---~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V- 528 (696)
+.+.+.+.+|.=.+.-.+ + .|++.+..+.+..+ ..+.|..+-..+ .+..+.|.+.. +-.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~---~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELL---KDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhh---cCCCceE
Confidence 455667788875443322 2 45666666655544 788888876652 11233333333 334566
Q ss_pred EEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC
Q 005444 529 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 584 (696)
Q Consensus 529 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG 584 (696)
.|-+. ..+=+..+|+. ||.++++.. .-.-+.||.++|+||..-...+
T Consensus 213 ~~~~~-----~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWDGT-----GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EecCC-----CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 55331 22236678884 999999843 2334789999999999987776
No 154
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.19 E-value=0.016 Score=49.54 Aligned_cols=71 Identities=17% Similarity=0.097 Sum_probs=50.7
Q ss_pred CceEEEEecccCcccccccccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCch--HHHHHHhhcCCCcEEEEe
Q 005444 245 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 322 (696)
Q Consensus 245 ~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~--l~a~lla~~~gip~v~t~ 322 (696)
.+.++..+|+... .+....|.+.....-+...+. +++.||||+|.+.++ .-+.+-|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ili---rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILI---RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHH---HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 4689999998653 234556665544433333333 349999999998764 467888999999999999
Q ss_pred cCCC
Q 005444 323 HALE 326 (696)
Q Consensus 323 H~l~ 326 (696)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9873
No 155
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.52 Score=56.06 Aligned_cols=152 Identities=13% Similarity=0.132 Sum_probs=108.2
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCC----CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc----CC--
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY----KL-- 524 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~----~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~----~L-- 524 (696)
.++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+... ...+-......+...+++. +-
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~---~~~~v~~~k~~v~~~v~rIn~~f~~~~ 350 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT---DGKEVEELKFCVSVHVRRINEKFGSAS 350 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc---cchHHHHHHHHhHhhhhhhhhccCCcc
Confidence 477899999999999999888888877765554 5667776655441 1111111122233333222 11
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCCCCcchhhccCCeEEEECC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHIDP 600 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVvat~~gG~~EiI~dg~~G~l~~p 600 (696)
...|+++- ..++..++.++++ .+|+++..++-+|..++.+|+..|. .+.|.+..-|..+..++ ...+++|
T Consensus 351 ~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnp 424 (732)
T KOG1050|consen 351 YQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNP 424 (732)
T ss_pred cceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECC
Confidence 12344332 4678889999999 5999999999999999999999885 77888888888887644 4678999
Q ss_pred CCHHHHHHHHHHHHH
Q 005444 601 YHPDQAAELMADFFG 615 (696)
Q Consensus 601 ~d~e~la~~I~~~l~ 615 (696)
.|.++++..|..++.
T Consensus 425 w~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 425 WDGDEFAILISKALT 439 (732)
T ss_pred cchHHHHHHHHHHhh
Confidence 999999999988773
No 156
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=96.12 E-value=0.15 Score=53.13 Aligned_cols=140 Identities=17% Similarity=0.257 Sum_probs=80.9
Q ss_pred CCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 456 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
.+-+++++|.=|+ ||++ .+.++.+.+. ++++-||-+..+| ....+.+.+++ .+++.+.-
T Consensus 158 ~r~ilI~lGGsDp-k~lt--~kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~---~~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLT--LKVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEK---YPNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhH--HHHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhh---CCCeeeEe---
Confidence 4457888887555 6665 3445555443 3676555443221 14455555554 45787764
Q ss_pred ccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCCCCcchhhcc----CCeEEEECCCCHHHHH
Q 005444 536 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEH----GASGFHIDPYHPDQAA 607 (696)
Q Consensus 536 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVva----t~~gG~~EiI~d----g~~G~l~~p~d~e~la 607 (696)
..+++.+++.+ ||..+.. -|.|+.||...|+|.++ .+.-..+..... ...|++. ......
T Consensus 217 ---~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHH
Confidence 35578999996 8887753 38999999999999333 232222222211 2345553 234444
Q ss_pred HHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 608 ELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 608 ~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
..+.+ +..|+..+..++..++
T Consensus 285 ~~~~~----i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQ----IQKDYARRKNLSFGSK 305 (318)
T ss_pred HHHHH----hhhCHHHhhhhhhccc
Confidence 44533 3378887776665443
No 157
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.68 E-value=2.4 Score=45.02 Aligned_cols=111 Identities=12% Similarity=0.123 Sum_probs=64.1
Q ss_pred ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHH
Q 005444 468 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 547 (696)
Q Consensus 468 ~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~l 547 (696)
..++++.+.+++..+++.. .|++-.. ++.++..+.+. ++.... -.. +-..++
T Consensus 199 g~~~~~~~~~li~~l~k~g----iV~ipr~---------------~~~~eife~~~---n~i~pk-----~~v-D~l~Ll 250 (346)
T COG1817 199 GDRGISVLPDLIKELKKYG----IVLIPRE---------------KEQAEIFEGYR---NIIIPK-----KAV-DTLSLL 250 (346)
T ss_pred cccchhhHHHHHHHHHhCc----EEEecCc---------------hhHHHHHhhhc---cccCCc-----ccc-cHHHHH
Confidence 4677777888888886542 4444322 22344444442 122211 111 212233
Q ss_pred HccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC---CcchhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 548 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 548 a~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~g---G~~EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.- |++++ .+-|.-.-||...|+|.|.+.-| +.-+... ..|.++..+|+.+..+...+.+
T Consensus 251 yy-a~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 251 YY-ATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hh-hheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 32 55666 35566678999999999998633 3444443 3688888888887766665544
No 158
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=95.66 E-value=0.00055 Score=66.32 Aligned_cols=91 Identities=16% Similarity=0.258 Sum_probs=57.1
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC--------cchhhccCCeEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 597 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG--------~~EiI~dg~~G~l 597 (696)
.+|.+.++.. ++..+|+. ||+.|.- +-+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789988543 37788884 9998873 44689999999999998876555 3333434444554
Q ss_pred ECCC--CHHHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q 005444 598 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 631 (696)
Q Consensus 598 ~~p~--d~e~la~~I~~~l~~l~~dp~~~~~m~~~a 631 (696)
+... +++.+.++|. .+..++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i~----~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIE----ELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHH----CHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHH----HHHcCcHHHHHHHHHH
Confidence 4332 3566777774 4558888777666554
No 159
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.37 E-value=2 Score=44.79 Aligned_cols=145 Identities=15% Similarity=0.079 Sum_probs=80.7
Q ss_pred CCCCCEE---EEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHH-----------H
Q 005444 454 DRSKPIV---FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL-----------M 519 (696)
Q Consensus 454 ~~~k~iI---l~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~l-----------i 519 (696)
+..+... .|+||..-.||+..+++.-++..+. +...-++-|-...+ +.+. +.+. +
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~-i~d~~~~~~y~~~~~~ 245 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKIS-IKDHGIPYEYYPKLDC 245 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHH-HHHTT--EEEE-CTGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceee-eecCCcccccCccccc
Confidence 3344444 7999999999999999988876544 67777777744331 0011 1111 0
Q ss_pred HHcCC--CCcEEEeccccccCChhHHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCC-cEEEcCCCCcch---
Q 005444 520 KTYKL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE--- 587 (696)
Q Consensus 520 ~~~~L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~Gl-PVvat~~gG~~E--- 587 (696)
.+..+ ...+-.+| +.-++|....++. +...++-+. .+..-.+-+|..|||+ ||+-+..|....
T Consensus 246 ~~~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~ 320 (355)
T PF11440_consen 246 DEPKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTL 320 (355)
T ss_dssp GG---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TT
T ss_pred cCcccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeee
Confidence 11111 23466676 6778899999996 666665542 3557788999999995 777765554433
Q ss_pred ----hhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 588 ----IIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 588 ----iI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.+.+.-+.+.+|-+|.++..++|.++-
T Consensus 321 D~~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 321 DGTRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp TSSBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred cCceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 233344677899999999999987653
No 160
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.34 E-value=1.5 Score=45.38 Aligned_cols=112 Identities=10% Similarity=0.027 Sum_probs=67.8
Q ss_pred CCCCCEEEEEccccccCCh--HHHH---HHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHH-cCCCCc
Q 005444 454 DRSKPIVFSMARLDHVKNM--TGLV---ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQ 527 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~Kgi--~~Ll---ea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~ 527 (696)
.+..++-+++|.-.+.-.. +.+. .++-+..+. ....|++--+-.. -+..+.+++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 4566788889876654444 2222 232222221 3467777766554 2455666655 555556
Q ss_pred EEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 528 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 528 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
+.|-+.-++..| ...+++ +||.++.+...-. -.-||.+.|+||++-.-.+.
T Consensus 226 i~w~~~d~g~NP---Y~~~La-~Adyii~TaDSin---M~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYNP---YIDMLA-AADYIISTADSIN---MCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCCc---hHHHHh-hcceEEEecchhh---hhHHHhccCCCeEEEecCCc
Confidence 788774333222 456777 5999999865322 35799999999998755544
No 161
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=93.92 E-value=0.48 Score=51.94 Aligned_cols=131 Identities=11% Similarity=0.151 Sum_probs=64.8
Q ss_pred cCCCCCCCCCEEEEEccccccCCh------HHH--HHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHH
Q 005444 449 VGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 520 (696)
Q Consensus 449 ~g~l~~~~k~iIl~vGRL~~~Kgi------~~L--lea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~ 520 (696)
+|+ +.++.+|+|+=........ ... .+.+.. ...+++.|++-.-... .....
T Consensus 186 ~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~~----------------~~~~~ 245 (369)
T PF04464_consen 186 LGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPNM----------------KKKFK 245 (369)
T ss_dssp TT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHHH----------------HTT--
T ss_pred hcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCchh----------------hhchh
Confidence 555 6677799999665443222 111 222222 2236787776653221 11111
Q ss_pred H-cCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc--CC-------CCcchhhc
Q 005444 521 T-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEIIE 590 (696)
Q Consensus 521 ~-~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat--~~-------gG~~EiI~ 590 (696)
. ....++|.++. +..+++.++.. +|++|. -++-++.|++.+++|||-- +. |...+ ..
T Consensus 246 ~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~ 312 (369)
T PF04464_consen 246 DFKEDNSNIIFVS------DNEDIYDLLAA-ADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YE 312 (369)
T ss_dssp --TT-TTTEEE-T------T-S-HHHHHHT--SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TT
T ss_pred hhhccCCcEEECC------CCCCHHHHHHh-cCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hH
Confidence 1 34456788765 13368888884 999994 5677899999999999954 33 22223 22
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHH
Q 005444 591 HGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 591 dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
+...|-.+. +.+++.++|.+++
T Consensus 313 ~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 313 EDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TSSSS-EES--SHHHHHHHHTTHH
T ss_pred hhCCCceeC--CHHHHHHHHHhhh
Confidence 333455554 8899999986665
No 162
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=92.73 E-value=22 Score=40.68 Aligned_cols=76 Identities=14% Similarity=0.178 Sum_probs=49.9
Q ss_pred cEEEeccccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhh-ccCCeEEEEC
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHID 599 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI-~dg~~G~l~~ 599 (696)
.+.+.+ .++..++.. + ..+ ||. -+--++++||+.+|+|+|+- +.......+ +.-+.|..++
T Consensus 339 g~vv~~----W~PQ~~iL~---h-~~vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 406 (481)
T PLN02992 339 GFVVPS----WAPQAEILA---H-QAVGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSD 406 (481)
T ss_pred CEEEee----cCCHHHHhC---C-cccCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEec
Confidence 466666 555555444 2 333 553 23346899999999999997 444455565 3556787775
Q ss_pred C----CCHHHHHHHHHHHH
Q 005444 600 P----YHPDQAAELMADFF 614 (696)
Q Consensus 600 p----~d~e~la~~I~~~l 614 (696)
. -+.++++++|.+++
T Consensus 407 ~~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 407 DPKEVISRSKIEALVRKVM 425 (481)
T ss_pred CCCCcccHHHHHHHHHHHh
Confidence 3 36778888887776
No 163
>PLN02562 UDP-glycosyltransferase
Probab=91.96 E-value=4.7 Score=45.71 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=57.5
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEEC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID 599 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~ 599 (696)
.+++...+ .++..++... . +.++||. -+--++++||+.+|+|+|+- |....+..+.+ -+.|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35676666 5665565542 1 1334553 23346899999999999986 44555666654 35677776
Q ss_pred CCCHHHHHHHHHHHHHhhhcCHHHHHH
Q 005444 600 PYHPDQAAELMADFFGKCKENPSHWKK 626 (696)
Q Consensus 600 p~d~e~la~~I~~~l~~l~~dp~~~~~ 626 (696)
.-+.++++++|.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 567888999997776 67665543
No 164
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=91.88 E-value=0.48 Score=54.10 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=72.8
Q ss_pred CCCEEEEEccccccCChH----HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 456 SKPIVFSMARLDHVKNMT----GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~----~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
+..++++.|.+.. ...+ .++++++++ |. +++..-++.. .. .+++++...
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~~---------~l~~n~~~~ 328 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------PE---------NLPKNVLIV 328 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------GC---------HHHTTEEEE
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------cc---------cccceEEEe
Confidence 4457888898763 2233 344444433 44 5666554422 00 123467666
Q ss_pred ccccccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhccCCeEEEECCC--CHH
Q 005444 532 AAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPY--HPD 604 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~dg~~G~l~~p~--d~e 604 (696)
. .+|..++ +++ ..++||. =|--+++.||+.+|+|+|+-. ....+..+++.+.|..++.. +.+
T Consensus 329 ~----W~PQ~~l---L~hp~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~ 397 (500)
T PF00201_consen 329 K----WLPQNDL---LAHPRVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEE 397 (500)
T ss_dssp S----S--HHHH---HTSTTEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHH
T ss_pred c----cccchhh---hhcccceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHH
Confidence 5 5665554 443 1345663 234568999999999999974 34456666677788888755 456
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHH
Q 005444 605 QAAELMADFFGKCKENPSHWKKI 627 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m 627 (696)
++.++|.+++ +|+.+.+..
T Consensus 398 ~l~~ai~~vl----~~~~y~~~a 416 (500)
T PF00201_consen 398 ELRAAIREVL----ENPSYKENA 416 (500)
T ss_dssp HHHHHHHHHH----HSHHHHHHH
T ss_pred HHHHHHHHHH----hhhHHHHHH
Confidence 7777776665 788766443
No 165
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=91.01 E-value=1.6 Score=45.80 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=63.3
Q ss_pred EEEEEccccccCC--hHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 459 IVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 459 iIl~vGRL~~~Kg--i~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
+++..|.-.+.|. .+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 4445554444443 45677777777654 788999987644 334444454443233355666
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..|+..+++. +|++|.+ ++ | .+--|.+.|+|+|+-
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~---Ds-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTN---DS-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEee---CC-H-HHHHHHHcCCCEEEE
Confidence 5568899999996 9999987 32 3 344456999999985
No 166
>PLN02670 transferase, transferring glycosyl groups
Probab=90.79 E-value=9.5 Score=43.54 Aligned_cols=85 Identities=15% Similarity=0.137 Sum_probs=53.4
Q ss_pred cHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEECC------CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP------YHPDQAAELMADFFGKCKENPSHWKKISDGGLK 633 (696)
Q Consensus 564 GltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~p------~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~ 633 (696)
-++++||+++|+|+|+- +....+..+++-+.|..++. -+.++++++|.+++ .+++ -.++.+++++
T Consensus 367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm----~~~~-g~~~r~~a~~ 441 (472)
T PLN02670 367 WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM----VDDA-GEEIRDKAKE 441 (472)
T ss_pred cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh----cCcc-hHHHHHHHHH
Confidence 46899999999999996 44455666666778887753 24788888887776 5541 1223333333
Q ss_pred ---HHHHhCCHHHHHHHHHHHHH
Q 005444 634 ---RIYERYTWKIYSERLMTLAG 653 (696)
Q Consensus 634 ---~v~~~ysw~~~a~~l~~ly~ 653 (696)
.+.++=+-..+++.+.+.+.
T Consensus 442 l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 442 MRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred HHHHHhCcchhHHHHHHHHHHHH
Confidence 23344445555666555443
No 167
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=90.40 E-value=15 Score=38.34 Aligned_cols=121 Identities=15% Similarity=0.143 Sum_probs=68.6
Q ss_pred CCCCCEEEEEcccccc-------CChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 005444 454 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 525 (696)
Q Consensus 454 ~~~k~iIl~vGRL~~~-------Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~ 525 (696)
..++++|++...+... .+...+++.+..+.+..|+++++|-= .|......+ . ....+. +..
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~------~----~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK------Y----SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC------h----hHhhhhhcCC
Confidence 5678888888887654 23445666666666666788876544 332111111 0 222222 333
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHH
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 604 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e 604 (696)
+ +.++. +...++.++.. +|.++.- -+.+-+||+..|+||++-...-. ...|+..+....+
T Consensus 183 ~-~~~~~------~~~~~~~Ll~~-s~~Vvti-----nStvGlEAll~gkpVi~~G~~~Y------~~~glt~~~~~~~ 242 (269)
T PF05159_consen 183 N-VVIID------DDVNLYELLEQ-SDAVVTI-----NSTVGLEALLHGKPVIVFGRAFY------AGWGLTDDRKLDE 242 (269)
T ss_pred C-eEEEC------CCCCHHHHHHh-CCEEEEE-----CCHHHHHHHHcCCceEEecCccc------CCCCccCcCCchh
Confidence 3 44442 12346777775 6666542 25788999999999999643332 2256665554433
No 168
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=89.05 E-value=1.4 Score=49.89 Aligned_cols=100 Identities=11% Similarity=-0.045 Sum_probs=63.6
Q ss_pred HHhhhcCCEEEeccHHHHhhcccccccccccccccccccceeecccccCCCcEEEecCCCcCCCCCCCchHHHHHhhhhc
Q 005444 354 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHG 433 (696)
Q Consensus 354 ~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~ 433 (696)
......+|.+++.|+..+...+..+ ..++ ..++.+.++++|.+.+.+.-.....
T Consensus 204 ~e~~~~~~~~~~ns~~~~~~f~~~~------------------~~L~--~~d~~~~y~ei~~s~~~~~~~~~~~------ 257 (495)
T KOG0853|consen 204 EETTGLAWKILVNSYFTKRQFKATF------------------VSLS--NSDITSTYPEIDGSWFTYGQYESHL------ 257 (495)
T ss_pred hhhhhccceEecchhhhhhhhhhhh------------------hhcC--CCCcceeeccccchhccccccccch------
Confidence 3456788999999987654322221 1233 4458899999998877652111100
Q ss_pred chhhhcCCccccccccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCC
Q 005444 434 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE 487 (696)
Q Consensus 434 ~~~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~ 487 (696)
.-....+...|. ...+..+..+.|+.+.||++.+++++.++...-+
T Consensus 258 ------~~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~ 303 (495)
T KOG0853|consen 258 ------ELRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIP 303 (495)
T ss_pred ------hcccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccC
Confidence 001112223444 4457788999999999999999999988876543
No 169
>PLN03004 UDP-glycosyltransferase
Probab=88.90 E-value=10 Score=42.97 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=54.9
Q ss_pred cEEEeccccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEEC
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID 599 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~ 599 (696)
++...+ .++..+ ++++ +++ ||. -+--++++||+++|+|+|+- +....+..+.+ -+.|..++
T Consensus 335 g~~v~~----W~PQ~~---iL~H-~~v~~FvT----H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~ 402 (451)
T PLN03004 335 GMVVKS----WAPQVP---VLNH-KAVGGFVT----HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMN 402 (451)
T ss_pred cEEEEe----eCCHHH---HhCC-CccceEec----cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEec
Confidence 466665 455555 4443 666 553 23346899999999999996 55556666654 36888775
Q ss_pred C-----CCHHHHHHHHHHHHHhhhcCHHHHH
Q 005444 600 P-----YHPDQAAELMADFFGKCKENPSHWK 625 (696)
Q Consensus 600 p-----~d~e~la~~I~~~l~~l~~dp~~~~ 625 (696)
. -+.++++++|.+++ .|+++++
T Consensus 403 ~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 403 ESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred CCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 3 26788888887776 5655443
No 170
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=88.80 E-value=42 Score=37.08 Aligned_cols=88 Identities=16% Similarity=0.254 Sum_probs=54.5
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC-cchhhcc-CCeEE--EECCC
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-PAEIIEH-GASGF--HIDPY 601 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG-~~EiI~d-g~~G~--l~~p~ 601 (696)
.+|.+.- +.. ..++-..++. +|++|-.-. -+++=||+.|+|+|+=.+.. ...+.++ |..|+ .+.|.
T Consensus 266 ~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~ 335 (385)
T COG2327 266 AEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPL 335 (385)
T ss_pred cceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCC
Confidence 5677664 222 3566668884 888884322 35788999999999964333 2223322 33444 35567
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKK 626 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~ 626 (696)
|.+.+.+...+.+. .+++.+++
T Consensus 336 ~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 336 DAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred chHHHHHHHHHHHh---ccHHHHhh
Confidence 88888888877763 45554443
No 171
>PLN02555 limonoid glucosyltransferase
Probab=87.84 E-value=9.8 Score=43.51 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=58.5
Q ss_pred CCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEEC
Q 005444 525 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 599 (696)
Q Consensus 525 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~ 599 (696)
.+++...+ .++..++... . +.++||.= +--++++||+.+|+|+|+- +.......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45566666 5565555532 1 35666642 3346899999999999996 344455555554 6787772
Q ss_pred -----C--CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHH
Q 005444 600 -----P--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 634 (696)
Q Consensus 600 -----p--~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~ 634 (696)
. -+.++++++|.+++ .++ ..++|.+++++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~-~g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGE-KAAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCc-hHHHHHHHHHHH
Confidence 1 14678888887776 443 234555555443
No 172
>PLN03015 UDP-glucosyl transferase
Probab=87.84 E-value=56 Score=37.32 Aligned_cols=51 Identities=20% Similarity=0.190 Sum_probs=34.0
Q ss_pred cHHHHHHHHcCCcEEEcC----CCCcchhh-ccCCeEEEEC------CCCHHHHHHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHID------PYHPDQAAELMADFF 614 (696)
Q Consensus 564 GltvlEAMa~GlPVvat~----~gG~~EiI-~dg~~G~l~~------p~d~e~la~~I~~~l 614 (696)
-++++||+++|+|+|+-. ..-.+..+ +.-+.|.-+. .-..++++++|..++
T Consensus 363 wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 363 WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 358999999999999963 33344444 3345666653 125677788887766
No 173
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=87.51 E-value=5.6 Score=43.33 Aligned_cols=103 Identities=11% Similarity=0.073 Sum_probs=65.1
Q ss_pred CCCEEEEEccccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ ++ .+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e-------~e---~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK-------DD---LACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh-------HH---HHHHHHHHHhcCCCccccccC-
Confidence 355667777655666644 56666666643 3578888886533 11 222333443333233455677
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..|+..+++. +++||.. ++- .+-=|-|.|+|+|+=
T Consensus 250 ---~~sL~el~ali~~-a~l~v~n---DSG--p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGV---DSA--PAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEec---CCH--HHHHHHHcCCCEEEE
Confidence 6778999999995 9999976 332 345577899999985
No 174
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=87.43 E-value=3.7 Score=42.01 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=60.3
Q ss_pred CCCCEEEEEccccccCChHH--HHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 005444 455 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 532 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~--Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 532 (696)
+++.+++..|.=.+.|.... ..+.+..+.+.+ .+++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 44556777777667776554 777777776543 78888887643 11222333333322 12577877
Q ss_pred cccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 533 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 533 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..++..+++. +|++|.+ ++. .+-=|.+.|+|+|+=
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~---Dtg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGN---DTG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEE---SSH--HHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEec---CCh--HHHHHHHHhCCEEEE
Confidence 6778999999995 9999987 333 356688999999996
No 175
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=86.09 E-value=13 Score=42.31 Aligned_cols=141 Identities=17% Similarity=0.201 Sum_probs=71.8
Q ss_pred CCCEEEEEccccc--cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL~~--~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+..+.++.|.+.. .+.+..++.++..+. .--|.++.+......+.+.++...........++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~- 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS- 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----CCeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe-
Confidence 4567778887653 455566666666553 2223334432110000000000000001122222 234555556
Q ss_pred ccccCChhHHHHHHHcccc--EEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccC-CeEEEEC-----CC
Q 005444 534 QTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID-----PY 601 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg-~~G~l~~-----p~ 601 (696)
.++..++ +++ .. +||. -+-.++++||+.+|+|+|+- +....+..+.+. +.|+-+. .-
T Consensus 334 ---W~PQ~~i---L~h-~~vg~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~ 402 (455)
T PLN02152 334 ---WCSQIEV---LRH-RAVGCFVT----HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLV 402 (455)
T ss_pred ---eCCHHHH---hCC-cccceEEe----eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcC
Confidence 5554454 443 44 3553 23346899999999999996 444455555442 3455442 12
Q ss_pred CHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFF 614 (696)
Q Consensus 602 d~e~la~~I~~~l 614 (696)
+.+++++++.+++
T Consensus 403 ~~e~l~~av~~vm 415 (455)
T PLN02152 403 ERGEIRRCLEAVM 415 (455)
T ss_pred cHHHHHHHHHHHH
Confidence 6788888888776
No 176
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=85.49 E-value=4.2 Score=39.38 Aligned_cols=111 Identities=10% Similarity=0.057 Sum_probs=59.1
Q ss_pred CCCCeEEEEeCCCc-hHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccH
Q 005444 290 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 368 (696)
Q Consensus 290 ~~~pDvIh~h~~~~-~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 368 (696)
...+|+|++.+... +-+..+.....++|.++.+|.... .||.+...-.++...+ ......-.||.|+.+|.
T Consensus 57 ~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~~~~-------~ni~saLaAD~v~FNS~ 128 (168)
T PF12038_consen 57 SHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQYGM-------NNIYSALAADRVVFNSA 128 (168)
T ss_pred ccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccccccHHH-------HHHHHHHhceeeeecch
Confidence 34689999776432 333344444567999999997532 3444332222222111 12345668999999998
Q ss_pred HHHhhcccccccccccccccccccceeecccccCCCcEEEecCCC
Q 005444 369 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA 413 (696)
Q Consensus 369 ~~~~~~k~~v~qy~~~~~~~~p~l~~~~~gi~~~~~k~~VIpnGv 413 (696)
...+..-+.+.++-+. ||.... ..-.+...+|..|+|.|+
T Consensus 129 ~nr~sFL~~~~~fL~~----~PD~~p-~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 129 FNRDSFLDGIPSFLKR----MPDHRP-KGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hhHHHHHHHHHHHHHH----CCCCCc-hhHHHHHhccCeecCCCC
Confidence 7766544444444322 222111 001112245777777764
No 177
>PLN02167 UDP-glycosyltransferase family protein
Probab=84.65 E-value=25 Score=40.22 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=47.5
Q ss_pred cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcch-hhccCCeEEEECC-
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAE-IIEHGASGFHIDP- 600 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~E-iI~dg~~G~l~~p- 600 (696)
+....+ .++..++...= +.+.||.= +--++++||+++|+|+|+- +..-.+. +++.-+.|+.+..
T Consensus 341 rg~v~~----w~PQ~~iL~h~--~vg~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 410 (475)
T PLN02167 341 RGLVCG----WAPQVEILAHK--AIGGFVSH----CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLD 410 (475)
T ss_pred Ceeeec----cCCHHHHhcCc--ccCeEEee----CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecc
Confidence 344455 55555544311 14556642 2234899999999999996 3333443 3445567877642
Q ss_pred --------CCHHHHHHHHHHHH
Q 005444 601 --------YHPDQAAELMADFF 614 (696)
Q Consensus 601 --------~d~e~la~~I~~~l 614 (696)
-+.++++++|.+++
T Consensus 411 ~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 411 YVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred cccccCCcccHHHHHHHHHHHh
Confidence 25778888887776
No 178
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=84.63 E-value=8.7 Score=41.35 Aligned_cols=100 Identities=16% Similarity=0.073 Sum_probs=62.6
Q ss_pred CCC-EEEEEcc-ccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 005444 456 SKP-IVFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 531 (696)
Q Consensus 456 ~k~-iIl~vGR-L~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 531 (696)
+++ +++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ .+...++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 344 4455554 34566554 56666666654 2478899987644 233333333322 1223466
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
| ..+..++..+++. +|++|.. ++- .+-=|.|.|+|+|+=
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~---DSG--p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTN---DSG--LMHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEee---CCH--HHHHHHHcCCCEEEE
Confidence 6 6778999999995 9999976 332 345678999999984
No 179
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=84.14 E-value=2.9 Score=36.66 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=57.4
Q ss_pred EEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhH--HHHHHHccccEEEeCCCCCCCc---H
Q 005444 491 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE--LYRYIADTKGAFVQPAFYEAFG---L 565 (696)
Q Consensus 491 LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~e--l~~~la~aadvfV~PS~~E~fG---l 565 (696)
++|||+-.+ ....+++.++++|.. +.+.|... ...... +...+.. +|++|++..+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 678888333 256788899998864 44444322 233334 8888885 99999987654433 3
Q ss_pred HHHHHHHcCCcEEEcCCCCcchhh
Q 005444 566 TVVEAMTCGLPTFATCHGGPAEII 589 (696)
Q Consensus 566 tvlEAMa~GlPVvat~~gG~~EiI 589 (696)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 456788899999999877766554
No 180
>PLN02764 glycosyltransferase family protein
Probab=83.40 E-value=48 Score=37.67 Aligned_cols=86 Identities=5% Similarity=0.012 Sum_probs=52.8
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----CCCcchhhcc-CCeEEEECC-----CCHHHH
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDP-----YHPDQA 606 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~----~gG~~EiI~d-g~~G~l~~p-----~d~e~l 606 (696)
.++..++... . +.++||.= +--++++||+.+|+|+|+-. ....+..+.+ -+.|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 5555565542 1 24557742 33568999999999999964 3345555543 456776532 267888
Q ss_pred HHHHHHHHHhhhcCH-HHHHHHHHHHH
Q 005444 607 AELMADFFGKCKENP-SHWKKISDGGL 632 (696)
Q Consensus 607 a~~I~~~l~~l~~dp-~~~~~m~~~a~ 632 (696)
.+++.+++ .++ +..+++.++++
T Consensus 398 ~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 398 RDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHh----cCCchhHHHHHHHHH
Confidence 88887776 554 33444444444
No 181
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=82.68 E-value=49 Score=34.94 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=51.4
Q ss_pred hHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccc
Q 005444 472 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 551 (696)
Q Consensus 472 i~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aa 551 (696)
+..+++++..+.+.. +.+++++.-... .| .+..+++.+.+.-...| +. ..+..|+...++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 456677777665432 456655553321 11 22334444444323333 22 4567899999995 9
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 552 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 552 dvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
+++|--.+ -..+=|+.+|+|+++-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 98885433 3578899999999975
No 182
>PLN00164 glucosyltransferase; Provisional
Probab=81.84 E-value=31 Score=39.45 Aligned_cols=66 Identities=9% Similarity=0.030 Sum_probs=42.9
Q ss_pred cHHHHHHHHcCCcEEEc----CCCCcchhh-ccCCeEEEECC-------CCHHHHHHHHHHHHHhhhcCHH-HHHHHHHH
Q 005444 564 GLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPDQAAELMADFFGKCKENPS-HWKKISDG 630 (696)
Q Consensus 564 GltvlEAMa~GlPVvat----~~gG~~EiI-~dg~~G~l~~p-------~d~e~la~~I~~~l~~l~~dp~-~~~~m~~~ 630 (696)
-++++||+++|+|+|+- +..-....+ +.-+.|+.++. -+.++++++|.+++ .+++ ..+++.++
T Consensus 367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~ 442 (480)
T PLN00164 367 WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM----GGGEEEGRKAREK 442 (480)
T ss_pred cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHH
Confidence 35899999999999995 444455544 33467877642 25678888887776 5543 24444444
Q ss_pred HHH
Q 005444 631 GLK 633 (696)
Q Consensus 631 a~~ 633 (696)
+.+
T Consensus 443 a~~ 445 (480)
T PLN00164 443 AAE 445 (480)
T ss_pred HHH
Confidence 443
No 183
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=81.46 E-value=14 Score=40.03 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=63.0
Q ss_pred CCEEEEEccccccCCh--HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 457 KPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi--~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
..+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ .+.+...++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC--
Confidence 3455666654455544 455555555543 3578899986532 11222333333333223345677
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..|+..+++. ++++|.. ++ -.+-=|-|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~---DS--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGV---DS--VPMHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEec---CC--HHHHHHHHcCCCEEEE
Confidence 7788999999996 9999976 33 2455688999999984
No 184
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=80.61 E-value=17 Score=38.71 Aligned_cols=99 Identities=15% Similarity=0.030 Sum_probs=63.5
Q ss_pred CCCEEEEEccccccCCh--HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 456 SKPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi--~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
++.+++..|.=.+.|.. +...+.+..+.+. +.+++++|++++ +.+...++.+..+ + ..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~--~-~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP--G-AVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC--C-CeecC-
Confidence 44566677754566665 3566666666542 578888866543 1233344444332 2 35666
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+..++..+++. |+++|.. ++- .+-=|-+.|+|+|+=
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~---DSg--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGV---DTG--LTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeC---CCh--HHHHHHHcCCCEEEE
Confidence 6778999999995 9999986 332 344577889999985
No 185
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=79.71 E-value=15 Score=39.89 Aligned_cols=98 Identities=19% Similarity=0.143 Sum_probs=67.3
Q ss_pred CCEEEEEc-cccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 005444 457 KPIVFSMA-RLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 533 (696)
Q Consensus 457 k~iIl~vG-RL~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 533 (696)
+.+++..| .-...|+.. ...+.+..+.+.. .+++++|+..+ .+...++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 45667777 555667655 5666666666654 88999998733 445555555543 2233666
Q ss_pred ccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 534 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 534 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+-.++..+++. ||++|.+. + | .+-=|-|.|+|+|+-
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~D---S-g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGND---S-G-PMHLAAALGTPTIAL 276 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccC---C-h-HHHHHHHcCCCEEEE
Confidence 7788999999995 99999873 2 2 345588999999995
No 186
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=78.40 E-value=28 Score=37.98 Aligned_cols=159 Identities=13% Similarity=0.194 Sum_probs=106.1
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCC-CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEe
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWI 531 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~-~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L--~~~V~fl 531 (696)
+.+.+-+|=-+++-.|+-..=+=+..+.-+..| .+..+.|..... .++...+..++..+.+ ++...|.
T Consensus 188 ~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~---------~ke~~~F~~f~~~ldlvr~gkasfe 258 (364)
T PF10933_consen 188 PGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH---------LKEHPTFVNFANSLDLVRDGKASFE 258 (364)
T ss_pred CCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh---------hhcCHHHHHHHHhhHHhhcCeeEEe
Confidence 344555666667777764432222222222223 356666665544 1234566677776665 5678888
Q ss_pred ccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHH
Q 005444 532 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMA 611 (696)
Q Consensus 532 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~ 611 (696)
| +. +++.+++...|++|.=.+.-+.--.-.||+--|=|.|-. ...+. ..|+..+..|..+=+.+|.
T Consensus 259 g----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S~~l~--d~GYYY~~fD~~~G~r~L~ 324 (364)
T PF10933_consen 259 G----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----SPLLK--DVGYYYPDFDAFEGARQLL 324 (364)
T ss_pred e----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----cchhc--ccCcCCCCccHHHHHHHHH
Confidence 8 44 467788878899998777667777889999999999874 23342 2799999999999999998
Q ss_pred HHHHhhhcCHHHHHHHHHHHHHHHHHhCC
Q 005444 612 DFFGKCKENPSHWKKISDGGLKRIYERYT 640 (696)
Q Consensus 612 ~~l~~l~~dp~~~~~m~~~a~~~v~~~ys 640 (696)
+++. ++...++...+++++.+ ..++
T Consensus 325 ~A~~---~HD~~~~~Y~~ra~~~l-~~~~ 349 (364)
T PF10933_consen 325 RAIR---EHDADLDAYRARARRLL-DRLS 349 (364)
T ss_pred HHHH---HccccHHHHHHHHHHHH-HhhC
Confidence 8774 56666777777777766 4444
No 187
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=77.04 E-value=4.6 Score=42.52 Aligned_cols=78 Identities=15% Similarity=0.100 Sum_probs=47.9
Q ss_pred CCCeEEEEeCCC-chHHHHHHhhcCCCcEEEEecCCCccCC-C-CCCccHh----hhhh-hhhccchhhhhHHhhhcCCE
Q 005444 291 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKY-P-DSDIYWK----KFDE-KYHFSCQFTADLIAMNNADF 362 (696)
Q Consensus 291 ~~pDvIh~h~~~-~~l~a~lla~~~gip~v~t~H~l~~~~~-~-~s~~~~~----~~~~-~y~~~~~~~~e~~a~~~AD~ 362 (696)
.+.||+|+.... ++++|++++.+.|+|++.|-|+...... . -....|. .+.. ..+|.. ..-+.++..||.
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~--~l~~~~Y~~Ad~ 248 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFE--SLSRLAYRAADR 248 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHH--HHHHHHHHhhCe
Confidence 456999977654 4889999999999999999999732110 0 0011111 0000 011111 134568999999
Q ss_pred EEeccHHH
Q 005444 363 IITSTYQE 370 (696)
Q Consensus 363 IIt~S~~~ 370 (696)
|++.++..
T Consensus 249 I~~l~~~n 256 (268)
T PF11997_consen 249 ITPLYEYN 256 (268)
T ss_pred ecccchhh
Confidence 99988754
No 188
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=76.59 E-value=43 Score=35.17 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=83.6
Q ss_pred CEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccccc
Q 005444 458 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 537 (696)
Q Consensus 458 ~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~ 537 (696)
+.++.++.=.+.|+++.|+++.++.+. .+++-..|.|.. . .-....+.++.|+. +.++.+...
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~-------~----hl~~~~l~~~~G~~--~~~Vpy~G~- 141 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS-------D----HLAAALLAKAAGIK--FTHVPYDGG- 141 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH-------H----HHHHHHHHHHHT-----EEEE-SSH-
T ss_pred ceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch-------H----HHHHHHHHHHhCCc--eEEEEeCCc-
Confidence 456667666789999999999876532 344444443322 0 11334556677764 455553222
Q ss_pred CChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC--cEEEc---CCC-----------CcchhhccCCeEEEECCC
Q 005444 538 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL--PTFAT---CHG-----------GPAEIIEHGASGFHIDPY 601 (696)
Q Consensus 538 v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl--PVvat---~~g-----------G~~EiI~dg~~G~l~~p~ 601 (696)
.+-+..++....|+.+.. .-........|. |+.++ +.. |..++....-.|+.++++
T Consensus 142 --~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~g 213 (274)
T PF03401_consen 142 --AEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKG 213 (274)
T ss_dssp --HHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETT
T ss_pred --cHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCC
Confidence 345556666556766543 122344444442 11111 111 122333334568999999
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGL 632 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~ 632 (696)
-+++..+.+.+++.+..+||+..+.+.+.+.
T Consensus 214 tp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 214 TPDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp S-HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 9999999999999999999998777766554
No 189
>PLN02207 UDP-glycosyltransferase
Probab=76.26 E-value=1.1e+02 Score=34.82 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=48.0
Q ss_pred CcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhcc-CCeEEEEC-
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID- 599 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~d-g~~G~l~~- 599 (696)
+++...+ ..+..++...= +.+.||.= +--++++||+.+|+|+|+- +....+..+.+ -+.|+-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSH----CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeec----CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4444445 55555655421 13446532 2235889999999999996 44445554443 45666331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 005444 600 --------PYHPDQAAELMADFF 614 (696)
Q Consensus 600 --------p~d~e~la~~I~~~l 614 (696)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 126788999998887
No 190
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=75.55 E-value=23 Score=37.97 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=60.4
Q ss_pred CCEEEEEccccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 457 KPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
+.+++..|.-...|... ...+.+..+.+ .+.++++.||++. | .+...++.+.. ..+.+.|
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~--------e---~~~~~~i~~~~---~~~~l~g-- 240 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH--------E---EQRAKRLAEGF---PYVEVLP-- 240 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH--------H---HHHHHHHHccC---CcceecC--
Confidence 33444445433445443 56666666644 2567777644433 1 22333333322 3466777
Q ss_pred cccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 535 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
..+-.|+..+++. ||++|.. ++ -.+-=|-|+|+|+|+-
T Consensus 241 --~~sL~elaali~~-a~l~I~n---DS--Gp~HlA~A~g~p~val 278 (322)
T PRK10964 241 --KLSLEQVARVLAG-AKAVVSV---DT--GLSHLTAALDRPNITL 278 (322)
T ss_pred --CCCHHHHHHHHHh-CCEEEec---CC--cHHHHHHHhCCCEEEE
Confidence 6778999999995 9999976 22 2456688999999995
No 191
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=74.93 E-value=57 Score=34.88 Aligned_cols=112 Identities=17% Similarity=0.143 Sum_probs=62.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccc--eeeecCCCceEEEEecccCccccccccc
Q 005444 188 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR--LERVSGTEHTHILRVPFRSEKGILRQWI 265 (696)
Q Consensus 188 G~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~--~e~i~~~~~v~I~rvp~~~~~~~~~~wi 265 (696)
|-...+- .|...|.++||.|- |+.+-+..|-..|.-.+++ .......+|+-|-.+|.+...|
T Consensus 63 GKSTli~--------~L~~~l~~~G~rVa--VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG------ 126 (323)
T COG1703 63 GKSTLIE--------ALGRELRERGHRVA--VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG------ 126 (323)
T ss_pred chHHHHH--------HHHHHHHHCCcEEE--EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch------
Confidence 5566666 67778899999998 3333333333334433333 3334445678888888776544
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCC
Q 005444 266 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 325 (696)
Q Consensus 266 sr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l 325 (696)
-+..-+.++...+. ...+|+|+......+-.=.-++....+-++++..+.
T Consensus 127 -------GlS~at~~~i~~ld---AaG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 127 -------GLSRATREAIKLLD---AAGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred -------hhhHHHHHHHHHHH---hcCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 12223334444443 348999998776543322233344455556666554
No 192
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=74.57 E-value=32 Score=37.30 Aligned_cols=100 Identities=16% Similarity=0.062 Sum_probs=60.7
Q ss_pred CCEEEEEcc-ccccCChH--HHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC--C-cEEE
Q 005444 457 KPIVFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--G-QFRW 530 (696)
Q Consensus 457 k~iIl~vGR-L~~~Kgi~--~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~--~-~V~f 530 (696)
..+++..|. ..+.|... ...+.+..+.+ .+++++++|+..+ .+...++.+..+-. . .+.+
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeec
Confidence 344556654 23456443 45555555543 3678889987644 23333333333211 1 2455
Q ss_pred eccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 005444 531 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 580 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat 580 (696)
.| ..+-.++..+++. |+++|.. ++- .+-=|-|.|+|+|+=
T Consensus 247 ~g----~~sL~el~ali~~-a~l~I~n---DTG--p~HlAaA~g~P~val 286 (348)
T PRK10916 247 AG----ETQLEQAVILIAA-CKAIVTN---DSG--LMHVAAALNRPLVAL 286 (348)
T ss_pred cC----CCCHHHHHHHHHh-CCEEEec---CCh--HHHHHHHhCCCEEEE
Confidence 66 6678999999995 9999976 222 355688999999984
No 193
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=70.20 E-value=69 Score=37.43 Aligned_cols=190 Identities=12% Similarity=0.068 Sum_probs=116.9
Q ss_pred ccCCCCCCCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCC-C
Q 005444 448 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-G 526 (696)
Q Consensus 448 ~~g~l~~~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~-~ 526 (696)
.+|+ +++..++.....|-+ =-...++.+.++.+.-|+..|++.--..- ....++..+++.|++ +
T Consensus 752 ~y~L--p~d~vvf~~FNqLyK--idP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~p~ 816 (966)
T KOG4626|consen 752 QYGL--PEDAVVFCNFNQLYK--IDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLEPD 816 (966)
T ss_pred CCCC--CCCeEEEeechhhhc--CCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCCcc
Confidence 3676 566666666555543 22345565656556668877776653222 135788889999985 7
Q ss_pred cEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcCCCCcchhh-----ccCCeEEEECCC
Q 005444 527 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII-----EHGASGFHIDPY 601 (696)
Q Consensus 527 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~~gG~~EiI-----~dg~~G~l~~p~ 601 (696)
+|.|.. -...+|=.+-..- +||.+=+..+-|. .|-.|.+-+|+|+|.-...-.+.-| ..-+.|-++- .
T Consensus 817 riifs~----va~k~eHvrr~~L-aDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia-k 889 (966)
T KOG4626|consen 817 RIIFSP----VAAKEEHVRRGQL-ADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA-K 889 (966)
T ss_pred ceeecc----ccchHHHHHhhhh-hhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-h
Confidence 888886 3334555555553 7888877666553 4568899999999975332222221 1122333332 3
Q ss_pred CHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhhhhHHhcHHH
Q 005444 602 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY--ERYTWKIYSERLMTLAGVYGFWKYVSKLE 665 (696)
Q Consensus 602 d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~--~~ysw~~~a~~l~~ly~~y~~~~~~~~~~ 665 (696)
+.++..+.-.+ +..|.+..+.+...-+..-. --|+-..++..++++|.. -|+.--+.+
T Consensus 890 ~~eEY~~iaV~----Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~y~~G~ 949 (966)
T KOG4626|consen 890 NREEYVQIAVR----LATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKKYCSGE 949 (966)
T ss_pred hHHHHHHHHHH----hhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHHhccCC
Confidence 56666665544 34788888877665544321 238889999999999875 687644433
No 194
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=69.84 E-value=14 Score=36.16 Aligned_cols=64 Identities=20% Similarity=0.129 Sum_probs=42.7
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcC------CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEE
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFI 363 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~------gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 363 (696)
+.+||+|++|.+.......++++.+ |.++|++-- ....+- + -..-++.+.-||..
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES-~aRv~~---------l---------SlTGklly~~aD~f 150 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES-FARVKT---------L---------SLTGKLLYPFADRF 150 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe-eeecCC---------C---------chHHHHHHHhCCEE
Confidence 3489999999999888888888887 888877531 111000 0 01134566679999
Q ss_pred EeccHHHHh
Q 005444 364 ITSTYQEIA 372 (696)
Q Consensus 364 It~S~~~~~ 372 (696)
++.-++.++
T Consensus 151 ~VQW~~l~~ 159 (170)
T PF08660_consen 151 IVQWEELAE 159 (170)
T ss_pred EEcCHHHHh
Confidence 998877654
No 195
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=68.56 E-value=12 Score=44.36 Aligned_cols=44 Identities=34% Similarity=0.511 Sum_probs=29.0
Q ss_pred CCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCC
Q 005444 160 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 226 (696)
Q Consensus 160 ~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~ 226 (696)
-|..+||++||||-- ..++| .||. ..+|+++||+|+ |+++|...
T Consensus 366 ~~~~~rvLv~spHPD---Devi~---~GGT---------------larl~~~G~~V~--vv~~TsG~ 409 (652)
T PRK02122 366 LPYPKRVIIFSPHPD---DDVIS---MGGT---------------FRRLVEQGHDVH--VAYQTSGN 409 (652)
T ss_pred ccCCceEEEEEeCCC---chHhh---hHHH---------------HHHHHHCCCcEE--EEEecCCc
Confidence 456799999999932 22332 3442 235789999998 56666553
No 196
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=68.36 E-value=32 Score=34.39 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=26.1
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 228 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~ 228 (696)
|||++....|+-. ..+. .|.+.|++.||+|. |+++....
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSST
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCCC
Confidence 7999999888722 2233 45666777789999 88877543
No 197
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=67.47 E-value=22 Score=34.38 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=36.0
Q ss_pred CCCCeEEEEeCCCchHH-HHHH-hhc-C-CCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEe
Q 005444 290 QGFPDFIIGNYSDGNLV-ASLL-AYK-M-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 365 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~-a~ll-a~~-~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt 365 (696)
+.+||+|+|.++.++.+ ...+ .+. . ++|+++.+=++... -.. +.-..+|..++
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~-----H~~------------------W~~~~~D~y~V 143 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTV-----HPF------------------WIHPGVDRYFV 143 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCC-----CcC------------------eecCCCCEEEE
Confidence 45999999988876444 3333 333 3 47766544332110 001 13458899999
Q ss_pred ccHHHHh
Q 005444 366 STYQEIA 372 (696)
Q Consensus 366 ~S~~~~~ 372 (696)
.|+..++
T Consensus 144 ase~~~~ 150 (169)
T PF06925_consen 144 ASEEVKE 150 (169)
T ss_pred CCHHHHH
Confidence 9988765
No 198
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=66.50 E-value=1.2e+02 Score=34.26 Aligned_cols=142 Identities=13% Similarity=0.132 Sum_probs=75.3
Q ss_pred CCEEEEEccccc-----cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC--CCCcEE
Q 005444 457 KPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK--LDGQFR 529 (696)
Q Consensus 457 k~iIl~vGRL~~-----~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~--L~~~V~ 529 (696)
..++++.|.+.. .+-...++.+++.+ +++.|+.+=..... .. +.+... ..++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~------------~~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS------------IY---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc------------hh---hhhcCCCCCcCceE
Confidence 556777788763 33444455565544 46666665544320 00 222221 145677
Q ss_pred EeccccccCChhHHHHHHHcc-ccEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CCCCcchhhccCCeEEEECCCCH-
Q 005444 530 WIAAQTNRARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPYHP- 603 (696)
Q Consensus 530 flG~~~~~v~~~el~~~la~a-advfV~PS~~E~fGltvlEAMa~GlPVvat----~~gG~~EiI~dg~~G~l~~p~d~- 603 (696)
..+ .+|..++. +.+. .++||. .-|++ +++||..+|+|+|+. +..-.+..+.+...|.+.+..+.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 766 45555544 2321 344442 12444 459999999999964 44445566655444444433322
Q ss_pred -HHHHHHHHHHHHhhhcCHHHHHHHHHHH
Q 005444 604 -DQAAELMADFFGKCKENPSHWKKISDGG 631 (696)
Q Consensus 604 -e~la~~I~~~l~~l~~dp~~~~~m~~~a 631 (696)
..+.+++..++ .++++.+...+-+
T Consensus 409 ~~~~~~~~~~il----~~~~y~~~~~~l~ 433 (496)
T KOG1192|consen 409 SEELLEAIKEIL----ENEEYKEAAKRLS 433 (496)
T ss_pred cHHHHHHHHHHH----cChHHHHHHHHHH
Confidence 12566665554 7777665544433
No 199
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=66.45 E-value=4.7 Score=37.08 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=20.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCC
Q 005444 186 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 225 (696)
Q Consensus 186 tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~ 225 (696)
|+|-..-.+ .++++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 467666666 67788899999998 88765
No 200
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=64.91 E-value=37 Score=33.60 Aligned_cols=68 Identities=16% Similarity=0.067 Sum_probs=27.2
Q ss_pred CCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCCCCCCccHhhhhhhhhccchhhhhHHhhhcCCEEEeccHHHH
Q 005444 292 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 371 (696)
Q Consensus 292 ~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 371 (696)
+||+++.-....-..-...+++.|+|++..-=-+... +-..|+.+.. .-+..++.-|.|.+.|+..+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~----s~~~~~~~~~---------~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSER----SFRRYRRFPF---------LFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE------------------H---------HHHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccc----cchhhhhhHH---------HHHHHHHhCCEEEECCHHHH
Confidence 8999887665542223345577889977543222111 1111111111 12346788999999999877
Q ss_pred h
Q 005444 372 A 372 (696)
Q Consensus 372 ~ 372 (696)
+
T Consensus 162 ~ 162 (186)
T PF04413_consen 162 E 162 (186)
T ss_dssp H
T ss_pred H
Confidence 6
No 201
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=64.14 E-value=1.8e+02 Score=29.84 Aligned_cols=139 Identities=8% Similarity=-0.037 Sum_probs=72.5
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcccc
Q 005444 473 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 552 (696)
Q Consensus 473 ~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aad 552 (696)
....+-+..+.+ -.+++.++..... +++..+++ .++|+|... ....++ +.. ++
T Consensus 35 ~VA~RK~~~Ll~--~gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~ 87 (223)
T PRK05562 35 KAAFIKGKTFLK--KGCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KH 87 (223)
T ss_pred HHHHHHHHHHHh--CCCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-Cc
Confidence 333333444443 3577888876654 34444443 356888752 222233 343 66
Q ss_pred EEEeCCCCCCCcHHH-HHHHHcCCcEEEcCCCCcchhhc-----cCCeEEEE-CCCCHHHHHHHHHHHHHhhhcCHHHHH
Q 005444 553 AFVQPAFYEAFGLTV-VEAMTCGLPTFATCHGGPAEIIE-----HGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWK 625 (696)
Q Consensus 553 vfV~PS~~E~fGltv-lEAMa~GlPVvat~~gG~~EiI~-----dg~~G~l~-~p~d~e~la~~I~~~l~~l~~dp~~~~ 625 (696)
+.+..+-.+...-.+ -+|.+.|.+|.+.+.+...+++. .|.--+-+ ..+..-.+|..|.+-++.++.+-+.+-
T Consensus 88 LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~ 167 (223)
T PRK05562 88 LIVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFI 167 (223)
T ss_pred EEEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 555554444444444 45667799999887665555542 22222222 222334566666666665554444455
Q ss_pred HHHHHHHHHHHHh
Q 005444 626 KISDGGLKRIYER 638 (696)
Q Consensus 626 ~m~~~a~~~v~~~ 638 (696)
++....|..+.++
T Consensus 168 ~~l~~~R~~vk~~ 180 (223)
T PRK05562 168 EYVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHHHHHHhh
Confidence 5555566666443
No 202
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=60.66 E-value=20 Score=37.70 Aligned_cols=70 Identities=10% Similarity=0.139 Sum_probs=47.5
Q ss_pred hhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCC-cEEEcC--CCCcchhhccCCeEEEECCCCHHHHHHHH
Q 005444 540 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATC--HGGPAEIIEHGASGFHIDPYHPDQAAELM 610 (696)
Q Consensus 540 ~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-PVvat~--~gG~~EiI~dg~~G~l~~p~d~e~la~~I 610 (696)
..+....|+. +..+++|.-...+..-++|||++|| |||.++ .-...+++.=..-.+.++..+..++-+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456677774 8888888777778889999999995 666654 22345666445567777766665544444
No 203
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=57.86 E-value=27 Score=38.97 Aligned_cols=62 Identities=11% Similarity=-0.030 Sum_probs=45.7
Q ss_pred ccCCeEEEECC-CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 005444 590 EHGASGFHIDP-YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 655 (696)
Q Consensus 590 ~dg~~G~l~~p-~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y 655 (696)
...++=+-|.. +|.+++.++| +.+.+|++..++|+++|.+.+.+..+.+.+..=+..++..|
T Consensus 256 ~P~vHYVPV~~~~d~sdL~~~v----~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eY 318 (395)
T PF05686_consen 256 KPWVHYVPVKRDDDLSDLEEKV----EWLNAHDDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEY 318 (395)
T ss_pred cccccEEEeccccchhhHHHHh----hhcccChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34444455554 4678888887 44568999999999999999988888877777666666654
No 204
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=55.13 E-value=10 Score=37.53 Aligned_cols=33 Identities=18% Similarity=0.437 Sum_probs=26.0
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 225 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~ 225 (696)
|||+||+..|..| . .+++...++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~G--------------s-----------~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG--------------S-----------RILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH--------------H-----------HHHHHHHhCCCeeE----EEEeC
Confidence 7999999877632 1 55677889999999 88776
No 205
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=54.00 E-value=69 Score=33.47 Aligned_cols=48 Identities=15% Similarity=0.120 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 005444 605 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYG 656 (696)
Q Consensus 605 ~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~ 656 (696)
++.++|..+ .++++..++|+++|++.+.+..+.+.+..-+..++..|+
T Consensus 203 ~l~~~i~~~----~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~eya 250 (256)
T smart00672 203 ELKEAVDWG----NEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEYA 250 (256)
T ss_pred hHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 488888544 489999999999999999888999888888888777654
No 206
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=53.30 E-value=76 Score=32.01 Aligned_cols=113 Identities=18% Similarity=0.125 Sum_probs=64.4
Q ss_pred cccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEeccccccCChhHHHH
Q 005444 467 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAAQTNRARNGELYR 545 (696)
Q Consensus 467 ~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~-~V~flG~~~~~v~~~el~~ 545 (696)
+-.|=+..|..|+.-+... ..-++++||..+. ....+++.++..|..- .=+|+| +...+..+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlg---G~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIP---GTLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCC---CcCcCcchhc
Confidence 3445555666666555544 3467889988764 2345566666655421 126887 2333333333
Q ss_pred HHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCC
Q 005444 546 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 546 ~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d 602 (696)
++- =|+.+...-. .=..++.||...|.|||+- |.-..++.| -+.++.+|
T Consensus 112 ~~~--Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 112 YIE--PDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred cCC--CCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 322 2443333221 1257899999999999995 555555655 45676655
No 207
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=52.96 E-value=2.3e+02 Score=27.72 Aligned_cols=44 Identities=14% Similarity=0.351 Sum_probs=29.7
Q ss_pred CCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCC
Q 005444 159 RLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 226 (696)
Q Consensus 159 ~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~ 226 (696)
+++|.|||.|-.+ | .. |-...++ .++..|.+.|+.|- =++|...
T Consensus 1 ~~~~~mki~ITG~---P---------Gv-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EV 44 (179)
T COG1618 1 MIKMAMKIFITGR---P---------GV-GKTTLVL--------KIAEKLREKGYKVG---GFITPEV 44 (179)
T ss_pred CCCcceEEEEeCC---C---------Cc-cHHHHHH--------HHHHHHHhcCceee---eEEeeee
Confidence 3678899987643 2 22 5556666 78888999999886 3445443
No 208
>COG1647 Esterase/lipase [General function prediction only]
Probab=52.35 E-value=57 Score=33.33 Aligned_cols=44 Identities=20% Similarity=0.251 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 278 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 278 ~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
+.+..+.+.. .+-..|.++--+.+++++..++..+.++-++..-
T Consensus 72 v~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~ 115 (243)
T COG1647 72 VEDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMC 115 (243)
T ss_pred HHHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeeec
Confidence 3344444443 3345577788899999999999988866554443
No 209
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=50.46 E-value=1.3e+02 Score=34.42 Aligned_cols=96 Identities=8% Similarity=0.112 Sum_probs=58.9
Q ss_pred HHHHHHHccccEEEeCCCCCCCcHHHHHHHHcC-CcEEEcCC--CCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhh
Q 005444 542 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG-LPTFATCH--GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 618 (696)
Q Consensus 542 el~~~la~aadvfV~PS~~E~fGltvlEAMa~G-lPVvat~~--gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~ 618 (696)
...+.+++ +-.+++|+-.+...-.++||+.+| .|||.++. ....+++.-..-++.++ .+++-+.|.+.|..
T Consensus 336 ~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~-- 409 (464)
T KOG1021|consen 336 NYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS-- 409 (464)
T ss_pred hHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh--
Confidence 45667775 888999999998888999999999 58888854 33444444344455554 33333334544422
Q ss_pred cCHHHHHHHHHHHHHHHHHhCCHHH
Q 005444 619 ENPSHWKKISDGGLKRIYERYTWKI 643 (696)
Q Consensus 619 ~dp~~~~~m~~~a~~~v~~~ysw~~ 643 (696)
.-.+....|.++-...+.++|.|..
T Consensus 410 i~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 410 IPEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred cCHHHHHHHHHHHHHHHHhhEEeCC
Confidence 1233335555555545556665554
No 210
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=49.66 E-value=1.7e+02 Score=34.01 Aligned_cols=157 Identities=13% Similarity=0.107 Sum_probs=97.7
Q ss_pred CCCEEEEEccccc-cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005444 456 SKPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 534 (696)
Q Consensus 456 ~k~iIl~vGRL~~-~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 534 (696)
.++..+..|.-+. .||-+..++.+.+.. .++-.|.+.... ...+++-|.=+|
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~---------------------~~~~P~~V~NHG-- 328 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR---------------------PPNVPSFVKNHG-- 328 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC---------------------CcccchhhhhcC--
Confidence 3445555565554 677777777776542 344444333221 112333344455
Q ss_pred cccCChhHHHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCCCCcchh-----hc------------------
Q 005444 535 TNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEI-----IE------------------ 590 (696)
Q Consensus 535 ~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat~~gG~~Ei-----I~------------------ 590 (696)
..+..|+...+.. +-|||=.- -+| |=+.+||++.|+|.|-.....+..- ..
T Consensus 329 --~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~ 403 (559)
T PF15024_consen 329 --ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEF 403 (559)
T ss_pred --cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhh
Confidence 5667899999996 88988442 244 4578999999999888765433211 10
Q ss_pred -cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhh
Q 005444 591 -HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGF 657 (696)
Q Consensus 591 -dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~ 657 (696)
..-.-+.||-+|.+++-++|.+++. ++- .-++--.||-+.+.+++-.+.+.-.|
T Consensus 404 iG~PhVytVd~~n~~~v~~Avk~il~----~~v---------~Py~P~efT~egmLeRv~~~ie~q~f 458 (559)
T PF15024_consen 404 IGEPHVYTVDINNSTEVEAAVKAILA----TPV---------EPYLPYEFTCEGMLERVNALIEKQDF 458 (559)
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHh----cCC---------CCcCCcccCHHHHHHHHHHHHHhhhh
Confidence 1234578899999999999988873 221 12344568888888888777665444
No 211
>PRK06988 putative formyltransferase; Provisional
Probab=47.51 E-value=91 Score=33.53 Aligned_cols=18 Identities=33% Similarity=0.593 Sum_probs=11.5
Q ss_pred HHHHHHHcCCCccceeEEEeC
Q 005444 204 MLLRIKRQGLDISPKILIVTR 224 (696)
Q Consensus 204 L~~~L~~~G~eV~~~ilV~T~ 224 (696)
..+.|.+.|++|. .|+|.
T Consensus 17 ~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 17 CLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHhCCCCEE---EEEcC
Confidence 3455677898875 35554
No 212
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=47.14 E-value=58 Score=34.05 Aligned_cols=83 Identities=12% Similarity=-0.033 Sum_probs=43.4
Q ss_pred HHHHcCCCC-c-EEEeccccccCChhHHHHHHHc-cccEEEeCCCCC--CCcHHHHHHHHcCCcEEEcCCCCcchhhccC
Q 005444 518 LMKTYKLDG-Q-FRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHG 592 (696)
Q Consensus 518 li~~~~L~~-~-V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E--~fGltvlEAMa~GlPVvat~~gG~~EiI~dg 592 (696)
.+.++|++. + |-.-| +.+.+.=..++.+ ..|++|.=-..+ ++--++--|+.+|+|||.-+-+-... +
T Consensus 166 ~~~~~G~~~~~iia~~g----Pfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~ 237 (256)
T TIGR00715 166 QALKLGFPSDRIIAMRG----PFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G 237 (256)
T ss_pred HHHHcCCChhcEEEEeC----CCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C
Confidence 566667642 2 33334 3333222333332 245666432222 45567888999999999976664311 0
Q ss_pred CeEEEECCCCHHHHHHHHHH
Q 005444 593 ASGFHIDPYHPDQAAELMAD 612 (696)
Q Consensus 593 ~~G~l~~p~d~e~la~~I~~ 612 (696)
+-.+ ++.+++.+.+.+
T Consensus 238 --~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 238 --VAIF--DDISQLNQFVAR 253 (256)
T ss_pred --CccC--CCHHHHHHHHHH
Confidence 0112 367776666643
No 213
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=45.76 E-value=2.7e+02 Score=28.63 Aligned_cols=112 Identities=15% Similarity=0.133 Sum_probs=62.0
Q ss_pred CCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 457 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 457 k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
.-+|+|+|+ ..+...++|..++=...+...+-.+-|--.. + ++ ....+.. +.+.+++.+.|....
T Consensus 108 ~GiILFv~t---n~~~~~~ve~aA~r~~gy~~~~~w~~G~lTN---~--~~---l~g~~~~--~~~~~pd~~~f~~t~-- 172 (251)
T KOG0832|consen 108 GGIILFVGT---NNGFKDLVERAARRAGGYSHNRKWLGGLLTN---A--RE---LFGALVR--KFLSLPDALCFLPTL-- 172 (251)
T ss_pred CCeEEEEec---CcchHHHHHHHHHHhcCceeeeeeccceeec---c--hh---hcccccc--cccCCCcceeecccC--
Confidence 447888886 5566667765554333333333333332211 0 00 0011111 223456666665411
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCC
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d 602 (696)
..|++|.-...|.. .+++||.-++.|+|+- |....++.| -+.++.+|
T Consensus 173 -------------~~D~vvvln~~e~~-sAilEA~K~~IPTIgIVDtN~~P~li-----TYpVPaND 220 (251)
T KOG0832|consen 173 -------------TPDLVVVLNPEENH-SAILEAAKMAIPTIGIVDTNCNPELI-----TYPVPAND 220 (251)
T ss_pred -------------CcceeEecCccccc-HHHHHHHHhCCCeEEEecCCCCccce-----eeccCCCC
Confidence 23788877777764 5899999999999995 555566666 34566554
No 214
>PLN02534 UDP-glycosyltransferase
Probab=45.14 E-value=5.3e+02 Score=29.64 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=45.4
Q ss_pred CcEEEeccccccCChhHHHHHHHccccE--EEeCCCCCCCcHHHHHHHHcCCcEEEcCCCC----cchhhc-cCCeEEEE
Q 005444 526 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIE-HGASGFHI 598 (696)
Q Consensus 526 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVvat~~gG----~~EiI~-dg~~G~l~ 598 (696)
.++.+.| .++..++. ++ .++ ||. -+-.++++||+.+|+|+|+-...+ ....+. .-+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL---~h-~~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLIL---SH-PAIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHh---cC-CccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 3466656 45554544 33 555 664 344579999999999999974432 223332 22334433
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 005444 599 D---------------PYHPDQAAELMADFF 614 (696)
Q Consensus 599 ~---------------p~d~e~la~~I~~~l 614 (696)
. --+.++++.++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025678888888776
No 215
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.99 E-value=4.1e+02 Score=29.69 Aligned_cols=174 Identities=11% Similarity=0.088 Sum_probs=100.6
Q ss_pred EEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec-cccccCC
Q 005444 461 FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA-AQTNRAR 539 (696)
Q Consensus 461 l~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG-~~~~~v~ 539 (696)
=|.|..+..+-...+.+...+.++ +++.++||-..-. -.-+.+..++|.+..+..+ +++|.|.= ... -..
T Consensus 158 P~ygsyte~dpv~ia~egv~~fKk--e~fdvIIvDTSGR-----h~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasi-GQa 228 (483)
T KOG0780|consen 158 PFYGSYTEADPVKIASEGVDRFKK--ENFDVIIVDTSGR-----HKQEASLFEEMKQVSKAIK-PDEIIFVMDASI-GQA 228 (483)
T ss_pred eeEecccccchHHHHHHHHHHHHh--cCCcEEEEeCCCc-----hhhhHHHHHHHHHHHhhcC-CCeEEEEEeccc-cHh
Confidence 355677778888888899888876 5788888865433 1235566788888888776 56677653 111 112
Q ss_pred hhHHHHHHHccccE--EEeCCC----CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccC----CeEEEECCCCHHHHHHH
Q 005444 540 NGELYRYIADTKGA--FVQPAF----YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG----ASGFHIDPYHPDQAAEL 609 (696)
Q Consensus 540 ~~el~~~la~aadv--fV~PS~----~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg----~~G~l~~p~d~e~la~~ 609 (696)
.++..+.+..+.|+ .+++-. .-|..+++++ +.++||+--..|-.-|-++.- -.+-+.--+|.+.+.++
T Consensus 229 ae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek 306 (483)
T KOG0780|consen 229 AEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEK 306 (483)
T ss_pred HHHHHHHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHHHH
Confidence 33444555544555 344422 2234455555 468888876666443333211 01112233577777777
Q ss_pred HHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 005444 610 MADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 654 (696)
Q Consensus 610 I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~ 654 (696)
+.++- ...++++.+.+. +-+||...+.+++.++.+.
T Consensus 307 ~~ev~--~~d~~el~~kl~-------~gkFtlrd~y~Qfq~imkm 342 (483)
T KOG0780|consen 307 VQEVG--KDDAKELVEKLK-------QGKFTLRDFYDQFQNIMKM 342 (483)
T ss_pred HHHHh--hhhHHHHHHHHH-------hCCccHHHHHHHHHHHHhh
Confidence 76654 112233333221 3579999999998887654
No 216
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=43.10 E-value=3.6e+02 Score=28.27 Aligned_cols=35 Identities=34% Similarity=0.524 Sum_probs=22.3
Q ss_pred hCCCCeEEEE--eC-C--------CchHHHHHHhhcCCCcEEEEec
Q 005444 289 LQGFPDFIIG--NY-S--------DGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 289 ~~~~pDvIh~--h~-~--------~~~l~a~lla~~~gip~v~t~H 323 (696)
+..+||+|++ |. . .+...|++-+...|+|-+..-.
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3568999984 11 1 1234566667788999876554
No 217
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=42.01 E-value=3.7e+02 Score=27.89 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=22.7
Q ss_pred hCCCCeEEEE--eC-C--------CchHHHHHHhhcCCCcEEEEecC
Q 005444 289 LQGFPDFIIG--NY-S--------DGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 289 ~~~~pDvIh~--h~-~--------~~~l~a~lla~~~gip~v~t~H~ 324 (696)
+..+||+|++ |. . .+-.-|++-+...|+|-+..-..
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3568999973 21 1 12345666677889998766543
No 218
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=41.78 E-value=3.7e+02 Score=29.46 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=25.3
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
+-.-+..+-.+.|+..|++.+.....|+....+-
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~l 206 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPCL 206 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEee
Confidence 4445777788899999999888887776655543
No 219
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=41.55 E-value=2.7e+02 Score=29.28 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=57.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCC--CCCCCCccccc--eeeecCCCceEEEEecccCcccccc
Q 005444 187 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI--PDAKGTTCNQR--LERVSGTEHTHILRVPFRSEKGILR 262 (696)
Q Consensus 187 GG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~--~~~~g~~~~~~--~e~i~~~~~v~I~rvp~~~~~~~~~ 262 (696)
-|-...+. .|...+.++|+.|- |++-.+ |-..|...+++ .......+++.|-..+.+...|
T Consensus 40 aGKSTli~--------~l~~~~~~~g~~Va----VlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~atRG~lG--- 104 (266)
T PF03308_consen 40 AGKSTLID--------ALIRELRERGKRVA----VLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMATRGSLG--- 104 (266)
T ss_dssp SSHHHHHH--------HHHHHHHHTT--EE----EEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE---SSHH---
T ss_pred CcHHHHHH--------HHHHHHhhcCCceE----EEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecCcCCCCC---
Confidence 36777777 66777789999998 665443 33333333333 3334555688888888876544
Q ss_pred cccccCCCcccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 263 QWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 263 ~wisr~~i~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
-+...+.++...+.. ..+|+|+......+-.-.-++....+.+++..-
T Consensus 105 ----------Gls~~t~~~v~ll~a---aG~D~IiiETVGvGQsE~~I~~~aD~~v~v~~P 152 (266)
T PF03308_consen 105 ----------GLSRATRDAVRLLDA---AGFDVIIIETVGVGQSEVDIADMADTVVLVLVP 152 (266)
T ss_dssp ----------HHHHHHHHHHHHHHH---TT-SEEEEEEESSSTHHHHHHTTSSEEEEEEES
T ss_pred ----------CccHhHHHHHHHHHH---cCCCEEEEeCCCCCccHHHHHHhcCeEEEEecC
Confidence 233444455555443 389999977765444344445555555544443
No 220
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=41.33 E-value=5.1e+02 Score=28.30 Aligned_cols=125 Identities=8% Similarity=-0.048 Sum_probs=68.5
Q ss_pred CCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHH----HHHHccccEEEeCC--CC
Q 005444 487 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY----RYIADTKGAFVQPA--FY 560 (696)
Q Consensus 487 ~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~----~~la~aadvfV~PS--~~ 560 (696)
.+.+++|+|.|.- -+...+...+.|. .+|.+...+....+.++++ .+... +|+++..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4679999999843 2222233334454 3577776554455566655 55664 89999753 22
Q ss_pred CCCcHHHHHHHHcCCcEEEcCCCCcchhhc--cCCeEEEECCCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 005444 561 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 561 E~fGltvlEAMa~GlPVvat~~gG~~EiI~--dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
-+.+....|.+..-.+-+.-|..-|+++=. ...+-.++ |.|++.+.+.+ |-..+++....+...+
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~~-------n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQK-------HLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 334544455544322246668877777631 12223344 67776666532 3344544444444444
No 221
>KOG3909 consensus Queuine-tRNA ribosyltransferase [RNA processing and modification]
Probab=40.05 E-value=1.8e+02 Score=31.53 Aligned_cols=90 Identities=16% Similarity=0.224 Sum_probs=60.1
Q ss_pred HHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCC----CC--CcHHHHHHHHcCCcEEEcCCCCcchhh
Q 005444 516 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY----EA--FGLTVVEAMTCGLPTFATCHGGPAEII 589 (696)
Q Consensus 516 ~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~----E~--fGltvlEAMa~GlPVvat~~gG~~EiI 589 (696)
....+..+..+.+.|.|++.|.....++.+.+. +++.=+|-.. -+ -|++|+|-..-|.=++-|...-.+-
T Consensus 202 ~areq~~~~ygg~~f~gF~~n~~t~~~~l~lle--~~~~~Lpedkpr~Isg~~~PleVLecIQrGIDlfdssfpyqat-- 277 (414)
T KOG3909|consen 202 FAREQENQLYGGIAFLGFSNNKETDKEMLNLLE--ADLVGLPEDKPRCISGFESPLEVLECIQRGIDLFDSSFPYQAT-- 277 (414)
T ss_pred hhhhhhcccccceEeeeecCCcccHHHHhhccH--HhhccCCCCCccccCCCCCHHHHHHHHHhccccccccchhhhh--
Confidence 445556677788999999999999999999887 3444455321 22 3899999999999999887664322
Q ss_pred ccCCeEEE--ECCCCHHHHHHHH
Q 005444 590 EHGASGFH--IDPYHPDQAAELM 610 (696)
Q Consensus 590 ~dg~~G~l--~~p~d~e~la~~I 610 (696)
+....+. +++-..++...+|
T Consensus 278 -e~g~AltfSfd~p~~~d~~ski 299 (414)
T KOG3909|consen 278 -EAGVALTFSFDPPSKDDLNSKI 299 (414)
T ss_pred -hcceEEEEccCCCchhhhhhce
Confidence 2223443 4443344555555
No 222
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=39.85 E-value=1e+02 Score=30.88 Aligned_cols=113 Identities=16% Similarity=0.086 Sum_probs=61.6
Q ss_pred cccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEeccccccCChhHHHH
Q 005444 467 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAAQTNRARNGELYR 545 (696)
Q Consensus 467 ~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~-~V~flG~~~~~v~~~el~~ 545 (696)
+-.|=...|..|+.-+.... .-++++||..+. ....+++.++..|-.. +=+|+|- ...+.....
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~-----------~~~~V~~~A~~~g~~~v~~RWlgG---tLTN~~~~~ 105 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY-----------GQKPVLKFAKVTGARAIAGRFTPG---TFTNPMQKA 105 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH-----------HHHHHHHHHHHhCCceECCeeCCC---CCCCccccc
Confidence 33444555556655554433 457999998765 1334555666555321 2268872 222221111
Q ss_pred HHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCC
Q 005444 546 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 546 ~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d 602 (696)
+.. =|+.++... -.=..++.||...|.|||+- |.-..++.| -+.++.+|
T Consensus 106 -~~~-Pdlliv~dp-~~~~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Nd 155 (196)
T TIGR01012 106 -FRE-PEVVVVTDP-RADHQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNN 155 (196)
T ss_pred -cCC-CCEEEEECC-ccccHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCC
Confidence 121 344444322 12246899999999999995 555555655 35666554
No 223
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=39.13 E-value=4.1e+02 Score=26.59 Aligned_cols=170 Identities=12% Similarity=0.036 Sum_probs=80.3
Q ss_pred HHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEe
Q 005444 477 ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ 556 (696)
Q Consensus 477 ea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~ 556 (696)
..+..+.+ ..+++.++..... +.+.+++++ ++|.|... ... ...+.. +++++.
T Consensus 23 rk~~~Ll~--~ga~VtVvsp~~~-------------~~l~~l~~~----~~i~~~~~---~~~----~~dl~~-~~lVi~ 75 (205)
T TIGR01470 23 RKARLLLK--AGAQLRVIAEELE-------------SELTLLAEQ----GGITWLAR---CFD----ADILEG-AFLVIA 75 (205)
T ss_pred HHHHHHHH--CCCEEEEEcCCCC-------------HHHHHHHHc----CCEEEEeC---CCC----HHHhCC-cEEEEE
Confidence 33444444 3467777765443 344455543 36888752 122 223443 666554
Q ss_pred CCCC-CCCcHHHHHHHHcCCcEEEcCCCCcchhh-----ccCCeEEEEC-CCCHHHHHHHHHHHHHhhhc-CHHHHHHHH
Q 005444 557 PAFY-EAFGLTVVEAMTCGLPTFATCHGGPAEII-----EHGASGFHID-PYHPDQAAELMADFFGKCKE-NPSHWKKIS 628 (696)
Q Consensus 557 PS~~-E~fGltvlEAMa~GlPVvat~~gG~~EiI-----~dg~~G~l~~-p~d~e~la~~I~~~l~~l~~-dp~~~~~m~ 628 (696)
..-. |----...+|-..|+||-+.+.....+++ ..|.--+-+. .+..-.++..|.+-++.+.. +-+.+-++.
T Consensus 76 at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~~ 155 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATLA 155 (205)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 4332 23233456777889999777666554444 3332222221 22334566666655555443 223334444
Q ss_pred HHHHHHHHHhCCHHHHHHH-HHHHHHHhhhhHHhcHHHHHHHHhHHh
Q 005444 629 DGGLKRIYERYTWKIYSER-LMTLAGVYGFWKYVSKLERRETRRYLE 674 (696)
Q Consensus 629 ~~a~~~v~~~ysw~~~a~~-l~~ly~~y~~~~~~~~~~~~~~~~~~~ 674 (696)
...|..+.+...-..--++ |..++ .=.|+..+.+.+..+..++++
T Consensus 156 ~~~R~~~k~~~~~~~~r~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~ 201 (205)
T TIGR01470 156 ATWRDAVKKRLPNGAARRRFWEKFF-DGAFAERVLAGREEQAERVLA 201 (205)
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHh-ccHHHHHHHcCCHHHHHHHHH
Confidence 4555555443321111111 11111 113555555555555555554
No 224
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=38.13 E-value=4e+02 Score=26.16 Aligned_cols=109 Identities=9% Similarity=0.176 Sum_probs=64.3
Q ss_pred eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHc-cccEEEeCCCCCC----C
Q 005444 489 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEA----F 563 (696)
Q Consensus 489 ~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~----f 563 (696)
.+++|+.+.+. ....+....+..+ .+..++. ..+..+....+.. ..|++++-....+ -
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 4 MNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred eEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 57777776644 2334555554432 2322321 1123445555432 3688877543322 5
Q ss_pred cHHHHHHHH---cCCcEEE-cCCCCc---chhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 564 GLTVVEAMT---CGLPTFA-TCHGGP---AEIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 564 GltvlEAMa---~GlPVva-t~~gG~---~EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
|+.+++.+. .++|+|+ |..... .+.+..|..||+..|.+++++.++|..++
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 777777764 3467766 444332 24456789999999999999999997765
No 225
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=37.18 E-value=4e+02 Score=26.64 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcccc-EEEeCCCCCCCcHHHHHHHHcCCcEEEcCCC
Q 005444 509 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 583 (696)
Q Consensus 509 ~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aad-vfV~PS~~E~fGltvlEAMa~GlPVvat~~g 583 (696)
....+.+++.+++++..-.+.+.+.-+.......+-++++...| +++.|...+...-.+-++...|.|||..+.+
T Consensus 14 ~~~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 14 QQVIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 34455666666666654322211211111111223334444455 4556666667777788899999999998777
No 226
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=36.48 E-value=65 Score=32.15 Aligned_cols=46 Identities=22% Similarity=0.380 Sum_probs=36.7
Q ss_pred cccHHHHHHHHHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCc
Q 005444 271 WPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT 317 (696)
Q Consensus 271 ~p~l~~f~~~~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip 317 (696)
|..+......+++++.+. +.+||+|++-.-.|...|.+++..++++
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~ 54 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVK 54 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCC
Confidence 445566677777777754 7899999998888888999999999875
No 227
>COG4195 Phage-related replication protein [General function prediction only]
Probab=35.96 E-value=47 Score=32.78 Aligned_cols=69 Identities=22% Similarity=0.230 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhhcCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHH----HHH
Q 005444 131 AEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENE----MLL 206 (696)
Q Consensus 131 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~----L~~ 206 (696)
+++.-....-|.+..++-|+..+..- + .--+|+|++||| ||++-=+.++||++.++ |-+
T Consensus 8 ~~d~y~~f~~Lse~esp~dy~ii~~e--~--~~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~ylfe 70 (208)
T COG4195 8 AEDEYSNFASLSENESPVDYGIIYTE--K--LGSRVLILAPHG-------------GGIEGGVSELAREFSDEYSGYLFE 70 (208)
T ss_pred ccccccCHHHHHhccCcccCCeEEee--c--cCceEEEEeccC-------------CccCccHHHHHHHHHHHHHHHHHh
Confidence 44444445556555543333332111 1 013799999998 67777778888877665 445
Q ss_pred HHHHcCCCcc
Q 005444 207 RIKRQGLDIS 216 (696)
Q Consensus 207 ~L~~~G~eV~ 216 (696)
.|+..|+...
T Consensus 71 gLk~~~ns~l 80 (208)
T COG4195 71 GLKSPDNSEL 80 (208)
T ss_pred hhcCCCCCcc
Confidence 5566666554
No 228
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=35.54 E-value=4.2e+02 Score=26.54 Aligned_cols=109 Identities=6% Similarity=0.063 Sum_probs=63.9
Q ss_pred EEEEccccc--cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHc-CCCCcEEEeccccc
Q 005444 460 VFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLDGQFRWIAAQTN 536 (696)
Q Consensus 460 Il~vGRL~~--~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~~~V~flG~~~~ 536 (696)
+++-|..++ ..+.+.|.+.+..+.+ ++.+++++..... +.+ ++...+.+..+++ |..-.+...
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~--~~~~i~~IptAs~-----~~~--~~~~~~~~a~~~l~G~~~~~~~~----- 68 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTK--ARPKVLFVPTASG-----DRD--EYTARFYAAFESLRGVEVSHLHL----- 68 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhcc--CCCeEEEECCCCC-----CHH--HHHHHHHHHHhhccCcEEEEEec-----
Confidence 344444443 3456666666665542 4678888887655 222 3456667777777 654322221
Q ss_pred cCChhHHHHHHHccccEEEeCCC--------CCCCc--HHHHHHHHcCCcEEEcCCCC
Q 005444 537 RARNGELYRYIADTKGAFVQPAF--------YEAFG--LTVVEAMTCGLPTFATCHGG 584 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~--------~E~fG--ltvlEAMa~GlPVvat~~gG 584 (696)
.+.++....+.. +|++++|-- ....| -.+-++...|+|++.++.|.
T Consensus 69 -~~~~~~~~~l~~-ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 69 -FDTEDPLDALLE-ADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred -cCcccHHHHHhc-CCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 113455677775 999999831 11112 23455667899999988775
No 229
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=35.48 E-value=2.6e+02 Score=31.35 Aligned_cols=104 Identities=10% Similarity=0.036 Sum_probs=66.4
Q ss_pred CCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005444 456 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 535 (696)
Q Consensus 456 ~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 535 (696)
+..+.+..+..++..-..-|++++. +.+|++++++.-..+. ..+...+.++-.-.+.++..
T Consensus 49 ~p~vWiHaaSVGEv~a~~pLv~~l~---~~~P~~~ilvTt~T~T--------------g~e~a~~~~~~~v~h~YlP~-- 109 (419)
T COG1519 49 GPLVWIHAASVGEVLAALPLVRALR---ERFPDLRILVTTMTPT--------------GAERAAALFGDSVIHQYLPL-- 109 (419)
T ss_pred CCeEEEEecchhHHHHHHHHHHHHH---HhCCCCCEEEEecCcc--------------HHHHHHHHcCCCeEEEecCc--
Confidence 3456788888888777777777654 6679999998886655 11223334443345666642
Q ss_pred ccCChhHHHHHHHc-cccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 005444 536 NRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 581 (696)
Q Consensus 536 ~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVvat~ 581 (696)
....-+.++++. .-|+.|. ...|-+|+++.|+-..|+|++.-+
T Consensus 110 --D~~~~v~rFl~~~~P~l~Ii-~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 110 --DLPIAVRRFLRKWRPKLLII-METELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred --CchHHHHHHHHhcCCCEEEE-EeccccHHHHHHHHHcCCCEEEEe
Confidence 222344455532 1344443 346889999999999999998753
No 230
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.70 E-value=34 Score=30.79 Aligned_cols=32 Identities=38% Similarity=0.661 Sum_probs=26.2
Q ss_pred HhhhcCCcccc----CCcHHHHHHHHHHHHHhhcCC
Q 005444 117 VLQGMGFEKGW----GDTAEHVLEMMHLLLDILQAP 148 (696)
Q Consensus 117 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p 148 (696)
+||+|||...| |..|+-+-|++..+.|-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 69999999999 777999999998776655553
No 231
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=34.60 E-value=1.3e+02 Score=31.39 Aligned_cols=113 Identities=13% Similarity=0.095 Sum_probs=59.6
Q ss_pred cccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEec-cccccCChhHHH
Q 005444 467 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIA-AQTNRARNGELY 544 (696)
Q Consensus 467 ~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~-~V~flG-~~~~~v~~~el~ 544 (696)
+-.|=...|..|+.-+......-.+++||..+. ....+.+.++..|-.- .=+|+| ..+|...
T Consensus 50 dL~kT~~~L~~Aa~~i~~i~~~~~Il~Vstr~~-----------~~~~V~k~A~~tg~~~i~~Rw~pGtlTN~~~----- 113 (249)
T PTZ00254 50 NLAKTWEKLKLAARVIAAIENPADVVVVSSRPY-----------GQRAVLKFAQYTGASAIAGRFTPGTFTNQIQ----- 113 (249)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCHH-----------HHHHHHHHHHHhCCeEECCcccCCCCCCccc-----
Confidence 334555555555544433222455788887754 1334555565554321 115776 2223211
Q ss_pred HHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CCCCcchhhccCCeEEEECCCC
Q 005444 545 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 602 (696)
Q Consensus 545 ~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat-~~gG~~EiI~dg~~G~l~~p~d 602 (696)
..+.. =|++|+..- -.=...+.||-..|.|||+- |.-..++.| -+.++.+|
T Consensus 114 ~~f~~-P~llIV~Dp-~~d~qAI~EA~~lnIPvIal~DTds~p~~V-----Dy~IP~Nd 165 (249)
T PTZ00254 114 KKFME-PRLLIVTDP-RTDHQAIREASYVNIPVIALCDTDSPLEYV-----DIAIPCNN 165 (249)
T ss_pred cccCC-CCEEEEeCC-CcchHHHHHHHHhCCCEEEEecCCCCcccC-----ceeeCCCC
Confidence 11121 344444321 22246799999999999995 555556655 35566655
No 232
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=34.35 E-value=3.4e+02 Score=26.82 Aligned_cols=30 Identities=27% Similarity=0.326 Sum_probs=23.1
Q ss_pred EEEEeCCCchHHHHHHhhcCCCcEEEEecC
Q 005444 295 FIIGNYSDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 295 vIh~h~~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
++.+-.+.|+..|..++.++++|.|.+-=+
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPa 90 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPA 90 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCC
Confidence 444455788899999999999998776543
No 233
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=33.61 E-value=78 Score=30.62 Aligned_cols=40 Identities=25% Similarity=0.489 Sum_probs=0.0
Q ss_pred hHHHHHHHccccEEEeCCC----CCCCcHH--HHHHHHcCCcEEEc
Q 005444 541 GELYRYIADTKGAFVQPAF----YEAFGLT--VVEAMTCGLPTFAT 580 (696)
Q Consensus 541 ~el~~~la~aadvfV~PS~----~E~fGlt--vlEAMa~GlPVvat 580 (696)
..+.+.+.+.+|++|+--+ .|+-|+. +.+|++.|+||+++
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
No 234
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=33.24 E-value=4.9e+02 Score=27.32 Aligned_cols=111 Identities=14% Similarity=0.064 Sum_probs=67.5
Q ss_pred EEEEccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCC---cchHHHHHHHHHHHHHHHcCCCCcEEEeccccc
Q 005444 460 VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKS---KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 536 (696)
Q Consensus 460 Il~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~---~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 536 (696)
++.++........+.+++...++++.. +.++..|... |.-| .+--..+..+.+.+..+++|++=-....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~k-pRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~----- 99 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFK-PRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVM----- 99 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeec-CCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeC-----
Confidence 455555677788999999999998853 5566666321 1111 1211245577788888999875322222
Q ss_pred cCChhHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCC
Q 005444 537 RARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCH 582 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVvat~~ 582 (696)
+. +-..++.+..|++-.+|. .+.++ -+-++-..|+||+.++.
T Consensus 100 --d~-~~~~~l~~~vd~~kIga~~~~n~~-LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 100 --DT-RDVEEVADYADMLQIGSRNMQNFE-LLKEVGKTKKPILLKRG 142 (266)
T ss_pred --Ch-hhHHHHHHhCCEEEECcccccCHH-HHHHHhcCCCcEEEeCC
Confidence 12 233444445788888886 34433 23445567999999854
No 235
>PRK04531 acetylglutamate kinase; Provisional
Probab=33.22 E-value=1.2e+02 Score=33.83 Aligned_cols=56 Identities=7% Similarity=0.070 Sum_probs=35.6
Q ss_pred CCCCEEEEEccccccCChHHHHHHHHHhhccCCCeEEEEE-eCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 527 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~~~l~~~~~~~~LvIv-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 527 (696)
+.++.|+-+|.=.-..+++.++..++.+... ..++||| |+|+. +.++.++.|++.+
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggpq---------------I~~~l~~~gie~~ 91 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGPQ---------------LDAELDAAGIEKE 91 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCHH---------------HHHHHHHcCCCcE
Confidence 4466666666522224578888888887764 4566666 55543 5677788888654
No 236
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=33.09 E-value=1.3e+02 Score=31.43 Aligned_cols=33 Identities=15% Similarity=-0.001 Sum_probs=25.6
Q ss_pred CCeEEEEeC----CCchHHHHHHhhcCCCcEEEEecC
Q 005444 292 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHA 324 (696)
Q Consensus 292 ~pDvIh~h~----~~~~l~a~lla~~~gip~v~t~H~ 324 (696)
.||+|.|-. .+++.++..+|..+|+|++..+-.
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 599998532 334789999999999998876654
No 237
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=31.82 E-value=4.6e+02 Score=26.05 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=31.6
Q ss_pred cCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 005444 537 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 581 (696)
Q Consensus 537 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVvat~ 581 (696)
..+..++..+++. ++++|.... -..+=|+++|+|+|+-.
T Consensus 245 ~~~~~~~~~~~~~-~~~~Is~Rl-----H~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 245 SLSPDELLELISQ-ADLVISMRL-----HGAILALSLGVPVIAIS 283 (286)
T ss_pred CCCHHHHHHHHhc-CCEEEecCC-----HHHHHHHHcCCCEEEEe
Confidence 5668899999995 999997644 35788999999999854
No 238
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=31.65 E-value=3e+02 Score=28.63 Aligned_cols=129 Identities=16% Similarity=0.123 Sum_probs=76.7
Q ss_pred HHHHHHccccEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEECCCCHHHHHHHHHHHHHhhhcCH
Q 005444 543 LYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENP 621 (696)
Q Consensus 543 l~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~p~d~e~la~~I~~~l~~l~~dp 621 (696)
-...+++ ||++|.-- -+|+|=-.+++.+ .+.++++...++..+- ....--++.+|.+...++..|.+.| +..||
T Consensus 46 d~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L--~~~dP 120 (264)
T cd01020 46 DAAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADAL--VKADP 120 (264)
T ss_pred HHHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHH--HHhCc
Confidence 3445664 88888754 3566655666655 4566666544432110 1124557889999999999999988 44689
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHhHHhHhhhhccc
Q 005444 622 SHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 682 (696)
Q Consensus 622 ~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (696)
+..+...+|+.++..+ ++..-+++.+....+.--++++ -...-.|+.--|.|...
T Consensus 121 ~~~~~y~~N~~~~~~~---l~~l~~~~~~~~~~~~~~~~v~---~H~af~Y~~~~yGl~~~ 175 (264)
T cd01020 121 DNKKYYQANAKKFVAS---LKPLAAKIAELSAKYKGAPVAA---TEPVFDYLLDALGMKER 175 (264)
T ss_pred ccHHHHHHHHHHHHHH---HHHHHHHHHHHHhhCCCCeEEE---eCchHHHHHHHCCCccc
Confidence 8888888888877633 3444444444433221111222 23556677777777654
No 239
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=30.84 E-value=52 Score=36.70 Aligned_cols=38 Identities=24% Similarity=0.621 Sum_probs=27.6
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT 232 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~ 232 (696)
|||++|...-+ |+++|.. |.+.||+|. .|+| +|+..|.
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~ 38 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGK 38 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCC
Confidence 78999987555 7888877 899999985 3555 4554443
No 240
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=30.46 E-value=1.6e+02 Score=27.20 Aligned_cols=100 Identities=19% Similarity=0.190 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCCccceeEEEeCCCCCCC-CCc-cccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHH
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLIPDAK-GTT-CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED 280 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~~~~~-g~~-~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~ 280 (696)
+...+|+++|..++ .|.++|...+... +.. ....+. .....++|..++.. ... ..--.-...+...
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l~~~l~--~~~~~~~i~~i~~~-~~D--------I~t~~d~~~~~~~ 76 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRALKDSLL--KKFYKAEVHKIPLK-FDD--------ILSDEDILTFMSI 76 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHHHHHhH--HhcCCcEEEEeccC-ccc--------cCCHHHHHHHHHH
Confidence 66677899998866 5666665433211 100 000010 11112444443321 100 1111123355555
Q ss_pred HHHHHHHHhCCCCe--EEEEeCCCc----hHHHHHHhhcCC
Q 005444 281 VGSEITAELQGFPD--FIIGNYSDG----NLVASLLAYKMG 315 (696)
Q Consensus 281 ~~~~i~~~~~~~pD--vIh~h~~~~----~l~a~lla~~~g 315 (696)
+.+.+... ..+++ -+|++-+.| +..+.+++..++
T Consensus 77 I~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 77 AAKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 55555543 44666 699888876 455566666555
No 241
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=29.91 E-value=4.4e+02 Score=26.80 Aligned_cols=125 Identities=16% Similarity=0.125 Sum_probs=61.3
Q ss_pred cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEE-E-eccccccCChhHHHH
Q 005444 469 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFR-W-IAAQTNRARNGELYR 545 (696)
Q Consensus 469 ~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L~~~V~-f-lG~~~~~v~~~el~~ 545 (696)
.+|+|....-..... ....+.|+|+|.+... ..+ -.++.+.+.+.| +- |. | .+....+.....=.+
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~~y--p~~----n~~l~~~i~~~ggll--iSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQIY--PRQ----NSKLAAKIAENGGLL--LSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCccCC--chh----hHHHHHHHHHcCCEE--EEecCCCCCCCcccHHHHHH
Confidence 579998776554322 2356777787765211 112 223333333333 10 00 0 010000111112233
Q ss_pred HHHccccEEEeCCCCCCCc--HHHHHHHHcCCcEEEcC-------CCCcchhhccCCeEEEECCCCHHHHHH
Q 005444 546 YIADTKGAFVQPAFYEAFG--LTVVEAMTCGLPTFATC-------HGGPAEIIEHGASGFHIDPYHPDQAAE 608 (696)
Q Consensus 546 ~la~aadvfV~PS~~E~fG--ltvlEAMa~GlPVvat~-------~gG~~EiI~dg~~G~l~~p~d~e~la~ 608 (696)
+++..++..|...-.+..| .++-.|+..|+||++-. ..|...+|.+| ...+. +.+++.+
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G-A~~i~---~~~d~~~ 218 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG-AALIT---SAKDILE 218 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC-CEEEC---CHHHHHH
Confidence 4443344544443333334 57789999999999973 24677888877 33333 4555443
No 242
>PRK12342 hypothetical protein; Provisional
Probab=29.82 E-value=1.3e+02 Score=31.35 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=26.2
Q ss_pred CCeEEEEeC----CCchHHHHHHhhcCCCcEEEEecCC
Q 005444 292 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 325 (696)
Q Consensus 292 ~pDvIh~h~----~~~~l~a~lla~~~gip~v~t~H~l 325 (696)
.||+|.|-. .+.+.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599998532 2347899999999999998777543
No 243
>PLN02670 transferase, transferring glycosyl groups
Probab=29.65 E-value=4.1e+02 Score=30.44 Aligned_cols=114 Identities=19% Similarity=0.262 Sum_probs=53.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCCCCCCccccceeeecCCCceEEEEecccCccccccccccc
Q 005444 188 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISR 267 (696)
Q Consensus 188 G~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr 267 (696)
|-..-.+ +|++.|+.+|+.|+ +++.......-... . ... ...++++.+|+....|+-..--+.
T Consensus 18 GHi~P~l--------~LAk~La~~G~~vT----~v~t~~n~~~~~~~--~-~~~--~~~i~~~~lp~p~~dglp~~~~~~ 80 (472)
T PLN02670 18 GHLIPFL--------RLSKLLAQKGHKIS----FISTPRNLHRLPKI--P-SQL--SSSITLVSFPLPSVPGLPSSAESS 80 (472)
T ss_pred hHHHHHH--------HHHHHHHhCCCEEE----EEeCCchHHhhhhc--c-ccC--CCCeeEEECCCCccCCCCCCcccc
Confidence 6777777 66667788999999 77765322110000 0 001 124777777754322211000000
Q ss_pred CCC----cccHHHHHHHHHHHHHHHh-CCCCeEEEEeCCCchHHHHHHhhcCCCcEEE
Q 005444 268 FDV----WPYLETFTEDVGSEITAEL-QGFPDFIIGNYSDGNLVASLLAYKMGITQCT 320 (696)
Q Consensus 268 ~~i----~p~l~~f~~~~~~~i~~~~-~~~pDvIh~h~~~~~l~a~lla~~~gip~v~ 320 (696)
.++ +.++..........+...+ +.+|+.|+..... ..+.-+|+++|+|.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~cvI~D~f~--~wa~~vA~~~gIP~~~ 136 (472)
T PLN02670 81 TDVPYTKQQLLKKAFDLLEPPLTTFLETSKPDWIIYDYAS--HWLPSIAAELGISKAF 136 (472)
T ss_pred cccchhhHHHHHHHHHHhHHHHHHHHHhCCCcEEEECCcc--hhHHHHHHHcCCCEEE
Confidence 111 1122221111122222111 2267777754433 3456678888999653
No 244
>PLN00016 RNA-binding protein; Provisional
Probab=29.62 E-value=43 Score=36.75 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=16.2
Q ss_pred HHHHHHHHcCCCccceeEEEeCCC
Q 005444 203 EMLLRIKRQGLDISPKILIVTRLI 226 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~~ 226 (696)
.|++.|.++||+|. ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56677889999998 888864
No 245
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=28.80 E-value=1.7e+02 Score=29.79 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=21.2
Q ss_pred CCCeEEEEeCCC--chHHHHHHhhc-CCCcEE-EEec
Q 005444 291 GFPDFIIGNYSD--GNLVASLLAYK-MGITQC-TIAH 323 (696)
Q Consensus 291 ~~pDvIh~h~~~--~~l~a~lla~~-~gip~v-~t~H 323 (696)
.+.|++++-... .|+++..++++ +|+|.+ ..++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~ 101 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVIARAR 101 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEec
Confidence 378888754433 37777777766 898854 3444
No 246
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=27.57 E-value=5.2e+02 Score=24.30 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=50.3
Q ss_pred hHHHHHHH-ccccEEEeCCC-CCCCcHHHHHHHHcCCcEEEc-CCCCcc---hhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 541 GELYRYIA-DTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFAT-CHGGPA---EIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 541 ~el~~~la-~aadvfV~PS~-~E~fGltvlEAMa~GlPVvat-~~gG~~---EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
.+....+. ...|++++-.. .+.-|..+++.+....|+++. ...... +.+..|..|++..|.+.+.+.++|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 34444443 22577776543 345577888888778888775 333322 3345688999999999999999998766
Q ss_pred H
Q 005444 615 G 615 (696)
Q Consensus 615 ~ 615 (696)
.
T Consensus 117 ~ 117 (196)
T PRK10360 117 T 117 (196)
T ss_pred c
Confidence 3
No 247
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=27.51 E-value=5.6e+02 Score=29.00 Aligned_cols=94 Identities=10% Similarity=0.075 Sum_probs=55.7
Q ss_pred cCChHHHHHHHHHhh-cc-CC--------CeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccC
Q 005444 469 VKNMTGLVECYGKNS-QL-RE--------LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 538 (696)
Q Consensus 469 ~Kgi~~Llea~~~l~-~~-~~--------~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v 538 (696)
..|.+..++++-... .. .+ .-.+.|+|+...+ ....+++++.+++|+.-+..|.| ..
T Consensus 168 ~~G~~~a~~al~~~~~~~~~~~~~~~~~~~~~VNiiG~~~~~---------~d~~el~~lL~~~Gl~v~~~~~~----~~ 234 (456)
T TIGR01283 168 NLGNKLACDALLKHVIGTREPEPIPVGTTVHDINLIGEFNVA---------GEFWHVKPLLEKLGIRVLATITG----DS 234 (456)
T ss_pred hHHHHHHHHHHHHHHhccCCcccccccCCCCcEEEEcCCCCc---------ccHHHHHHHHHHcCCeEEEEeCC----CC
Confidence 466666666554322 11 11 2346666764431 11457889999999988778887 45
Q ss_pred ChhHHHHHHHccccEEEeCCCCCCCcHHHHHHH--HcCCcEEE
Q 005444 539 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM--TCGLPTFA 579 (696)
Q Consensus 539 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAM--a~GlPVva 579 (696)
+.+++...-. |.+-+... -..+..+.+.| -+|.|.+.
T Consensus 235 s~eei~~~~~--A~lniv~~--~~~~~~~a~~L~e~~GiP~~~ 273 (456)
T TIGR01283 235 RYAEVQTAHR--AKLNMVQC--SKSMINLARKMEEKYGIPYFE 273 (456)
T ss_pred cHHHHHhccc--CcEEEEEC--HhHHHHHHHHHHHHcCCCEEe
Confidence 5677776544 33433221 12345677888 57999985
No 248
>PLN02562 UDP-glycosyltransferase
Probab=27.40 E-value=3.8e+02 Score=30.38 Aligned_cols=27 Identities=19% Similarity=0.354 Sum_probs=21.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCC
Q 005444 188 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 226 (696)
Q Consensus 188 G~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~ 226 (696)
|-..-.+ +|++.|+.+|+.|+ ++|...
T Consensus 18 GHi~PmL--------~LAk~Las~G~~VT----~vtt~~ 44 (448)
T PLN02562 18 GHVTPML--------KLASAFLSRGFEPV----VITPEF 44 (448)
T ss_pred cCHHHHH--------HHHHHHHhCCCEEE----EEeCcc
Confidence 7777778 66777788999999 887653
No 249
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=26.98 E-value=3.9e+02 Score=28.26 Aligned_cols=103 Identities=20% Similarity=0.148 Sum_probs=49.1
Q ss_pred HHHHHHHHcCCCccceeEEEeCC-CCC-CCCCccccceeeecCCCceEEEEecccCcccccccccccCCCcccHHHHHHH
Q 005444 203 EMLLRIKRQGLDISPKILIVTRL-IPD-AKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED 280 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~-~~~-~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~wisr~~i~p~l~~f~~~ 280 (696)
+|++.|+++|++|. ++--. ..+ ..|.......+.......+-|+++|+....+.++.-.+...+.
T Consensus 15 ~~~~~l~~~g~~v~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~i~~~~~~~~~~--------- 81 (287)
T TIGR02853 15 ELIRKLEELDAKIS----LIGFDQLEDGFTGAVKCELLELDLTTLDVVILPVPGTSHDGKVATVFSNEKVV--------- 81 (287)
T ss_pred HHHHHHHHCCCEEE----EEeccccccccccceeecchhhhhccCCEEEECCccccCCceEecccccCCcc---------
Confidence 58888999999998 65322 111 1122111122221222357888888877665333222222221
Q ss_pred HHHHHHHHhCCCCeEEEEeCCCchHHHHHHhhcCCCcEEEE
Q 005444 281 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 321 (696)
Q Consensus 281 ~~~~i~~~~~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t 321 (696)
+.+.+.+.+ ++..+.........+- .+++..|++++-.
T Consensus 82 l~~~~l~~~--~~~~~~~~G~~~~~l~-~~a~~~gi~v~~~ 119 (287)
T TIGR02853 82 LTPELLEST--KGHCTIYVGISNPYLE-QLAADAGVKLIEL 119 (287)
T ss_pred ccHHHHHhc--CCCCEEEEecCCHHHH-HHHHHCCCeEEEE
Confidence 112223222 2333333333322222 2777889887644
No 250
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=26.87 E-value=1.9e+02 Score=29.80 Aligned_cols=34 Identities=12% Similarity=0.026 Sum_probs=21.5
Q ss_pred CCCCeEEE--EeCCCchHHHHHHhhcCCCcEEEEec
Q 005444 290 QGFPDFII--GNYSDGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 290 ~~~pDvIh--~h~~~~~l~a~lla~~~gip~v~t~H 323 (696)
...+|.|. |....+.-+...+-+.+|+|++..-.
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 44688775 44444444555566778999876544
No 251
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=26.30 E-value=4.6e+02 Score=25.76 Aligned_cols=120 Identities=11% Similarity=0.074 Sum_probs=65.6
Q ss_pred ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe-cc--ccccCChhHHH
Q 005444 468 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI-AA--QTNRARNGELY 544 (696)
Q Consensus 468 ~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl-G~--~~~~v~~~el~ 544 (696)
...|+..+++.+. + ..+++.|+.++.. ..+....+.+++.+.+..+ |. .....|..+.+
T Consensus 83 ~~~g~~~~l~~L~---~--~g~~~~i~S~~~~-------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~ 144 (214)
T PRK13288 83 EYETVYETLKTLK---K--QGYKLGIVTTKMR-------------DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPV 144 (214)
T ss_pred cCcCHHHHHHHHH---H--CCCeEEEEeCCCH-------------HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHH
Confidence 3456666665554 3 2578888877654 3555666777876544222 21 11123455666
Q ss_pred HHHHccccEEEeCCC---CCCCcHHHHHHHHcCCcEEEcCCCC--cchhhccCCeEEEECCCCHHHHHHHH
Q 005444 545 RYIADTKGAFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELM 610 (696)
Q Consensus 545 ~~la~aadvfV~PS~---~E~fGltvlEAMa~GlPVvat~~gG--~~EiI~dg~~G~l~~p~d~e~la~~I 610 (696)
..+....+ +.|+. .+--..=+.-|.++|+++|+-..|. ..+..+ ...-+.++ +..++.+.+
T Consensus 145 ~~~~~~~~--~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~-~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 145 LKALELLG--AKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQ-YKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHcC--CCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhh-cCcCEEEC--CHHHHHHHH
Confidence 65553222 23321 1333345677889999999865552 333322 22345565 777776655
No 252
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=26.23 E-value=3.1e+02 Score=28.49 Aligned_cols=33 Identities=15% Similarity=0.112 Sum_probs=22.0
Q ss_pred CCCeEEE--EeCCCc--hHHHHHHhhcCCCcEEEEec
Q 005444 291 GFPDFII--GNYSDG--NLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 291 ~~pDvIh--~h~~~~--~l~a~lla~~~gip~v~t~H 323 (696)
.++++|+ +|.... .-.+.-+++.+++|++-...
T Consensus 64 ~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 64 EGIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred CCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 4888887 343332 34566778889999876554
No 253
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=26.19 E-value=2.3e+02 Score=29.00 Aligned_cols=49 Identities=24% Similarity=0.276 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHHHHhCCCCeEEE---EeCCCc-hHHHHHHhhcCCCcEEEEec
Q 005444 273 YLETFTEDVGSEITAELQGFPDFII---GNYSDG-NLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 273 ~l~~f~~~~~~~i~~~~~~~pDvIh---~h~~~~-~l~a~lla~~~gip~v~t~H 323 (696)
|.+.+.....+.+-.+++ .. +|+ .||..+ -.-....++.+.+|+|++.-
T Consensus 56 yres~~ks~~rlldSalk-n~-~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALK-NY-LVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhc-ce-EEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 445566666665555443 22 333 354444 23345567788899887643
No 254
>PRK11519 tyrosine kinase; Provisional
Probab=25.95 E-value=1.2e+03 Score=28.17 Aligned_cols=42 Identities=12% Similarity=-0.020 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCeEEEEeCCCch--HHHHHHhhcCCCcEEEEec
Q 005444 282 GSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 282 ~~~i~~~~~~~pDvIh~h~~~~~--l~a~lla~~~gip~v~t~H 323 (696)
...+...+..++|+|+...++.. .=+..++......+++.-+
T Consensus 625 ~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~ 668 (719)
T PRK11519 625 FAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARY 668 (719)
T ss_pred HHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeC
Confidence 34444445668999998887642 2355666776666555443
No 255
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=25.17 E-value=2.1e+02 Score=28.00 Aligned_cols=71 Identities=17% Similarity=0.240 Sum_probs=46.3
Q ss_pred HHHHHHHccccEEEeCCC------CCCCcHHHHHHHHcCCcEEEcC-----CCCcchhhccCCeEEE-ECCCCHHHHHHH
Q 005444 542 ELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATC-----HGGPAEIIEHGASGFH-IDPYHPDQAAEL 609 (696)
Q Consensus 542 el~~~la~aadvfV~PS~------~E~fGltvlEAMa~GlPVvat~-----~gG~~EiI~dg~~G~l-~~p~d~e~la~~ 609 (696)
.+-+.+.+ +|+.+.=-. .-.|.-.+-|.|-|++|+|||- .+...++ .....-++ ++|.|-+.+...
T Consensus 93 al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~i-k~~~~v~v~lt~~NR~~i~~~ 170 (179)
T COG1618 93 ALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQRI-KKLGGVYVFLTPENRNRILNE 170 (179)
T ss_pred HHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHHh-hhcCCEEEEEccchhhHHHHH
Confidence 45566664 888886421 2346667889999999999982 3343343 33333344 899998877777
Q ss_pred HHHHH
Q 005444 610 MADFF 614 (696)
Q Consensus 610 I~~~l 614 (696)
|...|
T Consensus 171 Il~~L 175 (179)
T COG1618 171 ILSVL 175 (179)
T ss_pred HHHHh
Confidence 76554
No 256
>KOG4552 consensus Vitamin-D-receptor interacting protein complex component [Transcription]
Probab=25.06 E-value=73 Score=31.80 Aligned_cols=22 Identities=36% Similarity=0.398 Sum_probs=17.3
Q ss_pred cccCCHHHHHHHHHHHHHHhcC
Q 005444 83 DRIQSISRLQSSLSKAEDHLSK 104 (696)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~ 104 (696)
.|=..+++||+.|+.|+..|+.
T Consensus 85 krD~~IQqLqk~LK~aE~iLtt 106 (272)
T KOG4552|consen 85 KRDEVIQQLQKNLKSAEVILTT 106 (272)
T ss_pred HhHHHHHHHHHHHHHHHHHHHH
Confidence 3445678999999999998874
No 257
>PLN02327 CTP synthase
Probab=24.99 E-value=6.6e+02 Score=29.36 Aligned_cols=108 Identities=14% Similarity=0.235 Sum_probs=65.3
Q ss_pred ChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCCh----------
Q 005444 471 NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARN---------- 540 (696)
Q Consensus 471 gi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~---------- 540 (696)
+++...+...++......+++-+||...+-.+ ...+..+.|..-...++..=.+.|+.... +..
T Consensus 280 ~~~~W~~~~~~~~~~~~~v~IalVGKY~~l~D----AY~Si~eAL~hA~~~~~~~v~i~wI~se~--l~~~~~~~~~~~y 353 (557)
T PLN02327 280 DLEEWTARAESCDNLTEPVRIAMVGKYTGLSD----SYLSVLKALLHASVACSRKLVIDWVAASD--LEDETAKETPDAY 353 (557)
T ss_pred ChHHHHHHHHHHhCCCCceEEEEEecccCCcH----hHHHHHHHHHHHHHHcCCeeEEEEEchhh--cCCcccccccchh
Confidence 34444444444444345699999998754211 24455556666666777777889986422 111
Q ss_pred hHHHHHHHccccEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 541 GELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 541 ~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
..+...+.+ +|.+|+|.-+ |+.-..+-.|...|+|++..+.|--
T Consensus 354 ~~~~~~L~~-~DGIvvpGGfG~~~~~G~i~ai~~are~~iP~LGIClGmQ 402 (557)
T PLN02327 354 AAAWKLLKG-ADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLGMQ 402 (557)
T ss_pred hhhHHhhcc-CCEEEeCCCCCCcccccHHHHHHHHHHcCCCEEEEcHHHH
Confidence 114456775 8888888643 2222344566678999999998843
No 258
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=24.58 E-value=7.6e+02 Score=25.13 Aligned_cols=111 Identities=13% Similarity=0.179 Sum_probs=63.6
Q ss_pred cCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE--Eecc-ccccCChhHHHH
Q 005444 469 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR--WIAA-QTNRARNGELYR 545 (696)
Q Consensus 469 ~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~--flG~-~~~~v~~~el~~ 545 (696)
..|+..+++.+. + ..+++.|+-++.. ..++...+.+++.+.+. +.+. ....-|..+.+.
T Consensus 110 ~pgv~e~L~~L~---~--~g~~l~I~Tn~~~-------------~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~ 171 (248)
T PLN02770 110 LNGLYKLKKWIE---D--RGLKRAAVTNAPR-------------ENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYL 171 (248)
T ss_pred CccHHHHHHHHH---H--cCCeEEEEeCCCH-------------HHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHH
Confidence 456666665553 3 2578888887754 45666777788765432 2221 122346667766
Q ss_pred HHHccccEEEeCCC---CCCCcHHHHHHHHcCCcEEEcCCCCcchhhccCCeEEEEC
Q 005444 546 YIADTKGAFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 599 (696)
Q Consensus 546 ~la~aadvfV~PS~---~E~fGltvlEAMa~GlPVvat~~gG~~EiI~dg~~G~l~~ 599 (696)
......+ +.|.. .+--..=+.-|-++|+++|+-..|...+.+.....-++++
T Consensus 172 ~a~~~~~--~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 172 KALEVLK--VSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred HHHHHhC--CChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 6554322 22321 2333455777889999999887776555443333345554
No 259
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=24.57 E-value=2.5e+02 Score=29.89 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=24.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCC
Q 005444 186 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 225 (696)
Q Consensus 186 tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~ 225 (696)
|||+-+.|. +++.|++.|++.|+.|. |.-|.
T Consensus 250 TGG~HRSV~-----iae~La~~L~~~~~~v~----v~HRd 280 (284)
T PF03668_consen 250 TGGQHRSVA-----IAERLAERLREKGYTVV----VRHRD 280 (284)
T ss_pred CCCcCcHHH-----HHHHHHHHHHhcCCcce----EEcCC
Confidence 699988776 55578899999999987 65444
No 260
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=24.53 E-value=9.6e+02 Score=27.43 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=70.9
Q ss_pred eEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcc-ccEEEeCCC-CCCCcHH
Q 005444 489 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT-KGAFVQPAF-YEAFGLT 566 (696)
Q Consensus 489 ~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a-advfV~PS~-~E~fGlt 566 (696)
.+++||-+..+ ....+.......|. .|+... +..+....+... .|+++.=-+ .+.-|+.
T Consensus 5 ~~iLvVDDd~~-----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ 65 (464)
T COG2204 5 ARILVVDDDPD-----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLE 65 (464)
T ss_pred CCEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHH
Confidence 34677766544 34445555555553 344443 345666667653 355554322 3667888
Q ss_pred HHHHHHc---CCcEEE-cCCCCcc---hhhccCCeEEEECCCCHHHHHHHHHHHHH
Q 005444 567 VVEAMTC---GLPTFA-TCHGGPA---EIIEHGASGFHIDPYHPDQAAELMADFFG 615 (696)
Q Consensus 567 vlEAMa~---GlPVva-t~~gG~~---EiI~dg~~G~l~~p~d~e~la~~I~~~l~ 615 (696)
+++.+.. ++|||. |..|.+. +.+..|..-|+..|-|++.+...+.++++
T Consensus 66 ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 66 LLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 8887766 699988 6777754 44466888899999999999999988873
No 261
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=24.22 E-value=8.3e+02 Score=25.73 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=21.3
Q ss_pred CCCCeEEEE--eC----C------CchHHHHHHhhcCCCcEEEEec
Q 005444 290 QGFPDFIIG--NY----S------DGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 290 ~~~pDvIh~--h~----~------~~~l~a~lla~~~gip~v~t~H 323 (696)
..+||+|++ |. . .+...|++-+...|+|-+..-.
T Consensus 82 ~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 82 GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 458999973 11 1 1234566667788999776543
No 262
>TIGR03446 mycothiol_Mca mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme.
Probab=24.09 E-value=1.3e+02 Score=32.04 Aligned_cols=23 Identities=17% Similarity=-0.008 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEeCC
Q 005444 276 TFTEDVGSEITAELQGFPDFIIGNYS 301 (696)
Q Consensus 276 ~f~~~~~~~i~~~~~~~pDvIh~h~~ 301 (696)
.....+.+.+.+ .+||+|+++..
T Consensus 108 ~~~~~L~~iIr~---~~PdvVvT~d~ 130 (283)
T TIGR03446 108 EAAEPLVRVIRE---FRPHVITTYDE 130 (283)
T ss_pred HHHHHHHHHHHH---cCCEEEEecCC
Confidence 334445555543 49999988743
No 263
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=23.77 E-value=1.4e+02 Score=32.78 Aligned_cols=106 Identities=20% Similarity=0.178 Sum_probs=52.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCCCC-CCCCcccc-----ceeeecCCCceEEEEecccCccc
Q 005444 186 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD-AKGTTCNQ-----RLERVSGTEHTHILRVPFRSEKG 259 (696)
Q Consensus 186 tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~~~-~~g~~~~~-----~~e~i~~~~~v~I~rvp~~~~~~ 259 (696)
+||+-..|. |.-|++|||+|. =++..... ..+..|.. ..+.+...-|+.+..+.|.
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~vdf~---- 72 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYVVDFE---- 72 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEEEchH----
Confidence 378766655 335899999997 55444333 22223331 1223332223444444432
Q ss_pred ccccccccCCCcccHHHHHHHHHHHHHHHh----CCCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCC
Q 005444 260 ILRQWISRFDVWPYLETFTEDVGSEITAEL----QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 325 (696)
Q Consensus 260 ~~~~wisr~~i~p~l~~f~~~~~~~i~~~~----~~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l 325 (696)
..|...+...+..+. .-.|||...+.-....+.- .+..+|.-.+.|-|-.
T Consensus 73 ---------------~~y~~~V~~~f~~~Y~~G~TPNPci~CN~~iKF~~~l~-~a~~lgad~iATGHYa 126 (356)
T COG0482 73 ---------------KEFWNKVFEYFLAEYKAGKTPNPCILCNKEIKFKALLD-YAKELGADYIATGHYA 126 (356)
T ss_pred ---------------HHHHHHHHHHHHHHHhCCCCCCcchhcCHHHHHHHHHH-HHHHcCCCeEEEeeeE
Confidence 333333333333322 3457765434333332222 3344888888888854
No 264
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=23.38 E-value=8.6e+02 Score=25.38 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=22.2
Q ss_pred hCCCCeEEEE--eC-C--------CchHHHHHHhhcCCCcEEEEec
Q 005444 289 LQGFPDFIIG--NY-S--------DGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 289 ~~~~pDvIh~--h~-~--------~~~l~a~lla~~~gip~v~t~H 323 (696)
+..+||+|++ |. . .+..-|+.-+...|+|-+..-.
T Consensus 83 ~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 83 MDKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ccCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 3568999974 11 1 1234566667778999876554
No 265
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=23.38 E-value=58 Score=36.10 Aligned_cols=52 Identities=19% Similarity=0.336 Sum_probs=36.2
Q ss_pred cCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCC
Q 005444 146 QAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 225 (696)
Q Consensus 146 ~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~ 225 (696)
.+|.+..-..|-+..+..++|+|+...|+ +.. .+++.|.++|++|. ++++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~--------------IG~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGY--------------IGK-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcH--------------HHH-----------HHHHHHHHCCCEEE----EEEec
Confidence 35556666677777777789988876554 333 45566788999987 77776
Q ss_pred C
Q 005444 226 I 226 (696)
Q Consensus 226 ~ 226 (696)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 266
>CHL00194 ycf39 Ycf39; Provisional
Probab=23.03 E-value=58 Score=34.65 Aligned_cols=33 Identities=12% Similarity=0.418 Sum_probs=24.7
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCC
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 225 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~ 225 (696)
|||+|++..|+.| + .++++|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~iG-----------~--------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTLG-----------R--------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHHH-----------H--------------HHHHHHHHCCCeEE----EEEcC
Confidence 6889888777632 2 45667789999998 88876
No 267
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=22.80 E-value=6.2e+02 Score=26.50 Aligned_cols=85 Identities=18% Similarity=0.263 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCC---CCCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 509 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 509 ~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~---~E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
....+.+++.++++|+. +..... .+..+.....+.+....|+++.+.. ...+...+..+..+++||+++..
T Consensus 146 ~~~~~~~~~~a~~~g~~--l~~~~v-~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~~--- 219 (294)
T PF04392_consen 146 VAQIEQLRKAAKKLGIE--LVEIPV-PSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSSD--- 219 (294)
T ss_dssp HHHHHHHHHHHHHTT-E--EEEEEE-SSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESSH---
T ss_pred HHHHHHHHHHHHHcCCE--EEEEec-CcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECCH---
Confidence 45677888888888864 332221 1122233344444445788777653 23344445567789999999752
Q ss_pred chhhccCC-eEEEECC
Q 005444 586 AEIIEHGA-SGFHIDP 600 (696)
Q Consensus 586 ~EiI~dg~-~G~l~~p 600 (696)
..+..|. .|+.++.
T Consensus 220 -~~v~~Gal~~~~~~~ 234 (294)
T PF04392_consen 220 -FYVKAGALGGYSVDY 234 (294)
T ss_dssp -HHHCTT-SEEEE--H
T ss_pred -HHhcCCcEEEEccCH
Confidence 3344443 4555543
No 268
>PRK05380 pyrG CTP synthetase; Validated
Probab=22.69 E-value=7.6e+02 Score=28.73 Aligned_cols=108 Identities=14% Similarity=0.253 Sum_probs=61.9
Q ss_pred ChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHcc
Q 005444 471 NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT 550 (696)
Q Consensus 471 gi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a 550 (696)
+++.--+...++......+++-+||...+-.+ ...+..+.|+......+..=.+.|+.... +..+.....+..
T Consensus 271 ~~~~w~~~~~~~~~~~~~v~IalVGKY~~l~D----aY~Sv~eAL~hag~~~~~~v~i~wIdse~--l~~~~~~~~L~~- 343 (533)
T PRK05380 271 DLSEWEELVERLKNPKGEVTIALVGKYVELPD----AYKSVIEALKHAGIANDVKVNIKWIDSED--LEEENVAELLKG- 343 (533)
T ss_pred CHHHHHHHHHHHhCCCCceEEEEEeCccCCcH----HHHHHHHHHHHHHHHcCCeeEEEEEChhh--ccCcchhhHhhc-
Confidence 33333333444443345799999998765222 23344555555555556555678876311 111123456775
Q ss_pred ccEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 551 KGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 551 advfV~PS~~-----E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
+|.+|+|--+ ++.-..+-+|...|+|+++.+.|--
T Consensus 344 ~DGIIlpGGfG~~~~~g~i~~i~~a~e~~iPiLGIClGmQ 383 (533)
T PRK05380 344 VDGILVPGGFGERGIEGKILAIRYARENNIPFLGICLGMQ 383 (533)
T ss_pred CCEEEecCCCCccccccHHHHHHHHHHCCCcEEEEchHHH
Confidence 8888887522 2222245667789999999998853
No 269
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=22.63 E-value=6.6e+02 Score=25.83 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=49.1
Q ss_pred ccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCc---EEEec-cccccCChhHH
Q 005444 468 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ---FRWIA-AQTNRARNGEL 543 (696)
Q Consensus 468 ~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~---V~flG-~~~~~v~~~el 543 (696)
...|+..+++.+. + ..+++.|+.+... ..+....+.+++.+. ..+.+ .....-|..++
T Consensus 102 ~~pg~~elL~~L~---~--~g~~l~I~T~~~~-------------~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~ 163 (267)
T PRK13478 102 PIPGVLEVIAALR---A--RGIKIGSTTGYTR-------------EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWM 163 (267)
T ss_pred CCCCHHHHHHHHH---H--CCCEEEEEcCCcH-------------HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHH
Confidence 3456666665554 3 2577888776543 233333444333221 22222 11122345566
Q ss_pred HHHHHccccEEEe-CCC---CCCCcHHHHHHHHcCCcEEEcCCCCc
Q 005444 544 YRYIADTKGAFVQ-PAF---YEAFGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 544 ~~~la~aadvfV~-PS~---~E~fGltvlEAMa~GlPVvat~~gG~ 585 (696)
+.......+ +. |+. .+--..=+.=|-++|+++|+...|+.
T Consensus 164 ~~~a~~~l~--~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 164 ALKNAIELG--VYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHcC--CCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 655443222 22 221 23333446677899999999876654
No 270
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=22.50 E-value=1.2e+03 Score=26.79 Aligned_cols=61 Identities=21% Similarity=0.223 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHHHH--HcCCcEEEc
Q 005444 512 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM--TCGLPTFAT 580 (696)
Q Consensus 512 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAM--a~GlPVvat 580 (696)
..+++++.+.+|+.-++.|.+ ..+.+++.+. . .|++-|+++. .+|....+.| .+|.|.+.+
T Consensus 177 ~~elkrlL~~lGi~vn~v~p~----g~s~~dl~~l-~-~A~~NIv~~~--~~g~~~A~~Le~~fGiP~i~~ 239 (511)
T TIGR01278 177 LIELRRLLKTLGIEVNVVAPW----GASIADLARL-P-AAWLNICPYR--EIGLMAAEYLKEKFGQPYITT 239 (511)
T ss_pred HHHHHHHHHHCCCeEEEEeCC----CCCHHHHHhc-c-cCcEEEEech--HHHHHHHHHHHHHhCCCcccc
Confidence 568899999999998888876 4456777764 3 2666666543 2567777777 689998753
No 271
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=22.42 E-value=6.9e+02 Score=26.15 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=70.9
Q ss_pred cccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHH
Q 005444 467 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY 546 (696)
Q Consensus 467 ~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ 546 (696)
....|+..+++.+. + ..+++.|+-++.. ..+....+.+++.+.+..+-...+..+..+.+..
T Consensus 142 ~l~pg~~e~L~~L~---~--~gi~laIvSn~~~-------------~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~ 203 (273)
T PRK13225 142 QLFPGVADLLAQLR---S--RSLCLGILSSNSR-------------QNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQ 203 (273)
T ss_pred CcCCCHHHHHHHHH---H--CCCeEEEEeCCCH-------------HHHHHHHHHcCChhheEEEEecCCCCCCHHHHHH
Confidence 44567766666654 3 2578888887754 4566677888887665544222222223344443
Q ss_pred HHccccEEEeCCC---CCCCcHHHHHHHHcCCcEEEcCCCCcc-hhhccCCeEEEECCCCHHHHHHHHHHHH
Q 005444 547 IADTKGAFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEHGASGFHIDPYHPDQAAELMADFF 614 (696)
Q Consensus 547 la~aadvfV~PS~---~E~fGltvlEAMa~GlPVvat~~gG~~-EiI~dg~~G~l~~p~d~e~la~~I~~~l 614 (696)
+....+ +-|.. .+--..-+.-|-++|..+|.-..|... +-+......+.++ +..++.+.+.+++
T Consensus 204 ~l~~~~--~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~~~~~ 271 (273)
T PRK13225 204 LVAREG--WQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAVTQLM 271 (273)
T ss_pred HHHHhC--cChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHHHHHh
Confidence 332122 22321 233345678888999999987655332 2232233556675 7787777665543
No 272
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=22.41 E-value=5.6e+02 Score=27.93 Aligned_cols=65 Identities=23% Similarity=0.345 Sum_probs=39.6
Q ss_pred HHHHHHHHH-HHHHhhcCCCcchHHHHhcCCCceeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q 005444 131 AEHVLEMMH-LLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIK 209 (696)
Q Consensus 131 ~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~p~~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~ 209 (696)
.+-+++.|. .+.+++.+.+...+...+..-..+.=|++++..|. |-..-+- .||..|.
T Consensus 106 ~~~v~~~l~~~l~~il~~~~~~~~~~~~~~~~~p~Vil~vGVNG~-------------GKTTTIa--------KLA~~l~ 164 (340)
T COG0552 106 EETVKEALREALIEILRPVDKVDLPLEIPKEKKPFVILFVGVNGV-------------GKTTTIA--------KLAKYLK 164 (340)
T ss_pred HHHHHHHHHHHHHHHhcccccccchhhhccCCCcEEEEEEecCCC-------------chHhHHH--------HHHHHHH
Confidence 555666666 55666654222222222222233566788887765 5555565 7888899
Q ss_pred HcCCCcc
Q 005444 210 RQGLDIS 216 (696)
Q Consensus 210 ~~G~eV~ 216 (696)
++|+.|.
T Consensus 165 ~~g~~Vl 171 (340)
T COG0552 165 QQGKSVL 171 (340)
T ss_pred HCCCeEE
Confidence 9999996
No 273
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=22.28 E-value=66 Score=34.64 Aligned_cols=19 Identities=21% Similarity=0.363 Sum_probs=14.9
Q ss_pred HHHHHHHHcCCCccceeEEEeCC
Q 005444 203 EMLLRIKRQGLDISPKILIVTRL 225 (696)
Q Consensus 203 ~L~~~L~~~G~eV~~~ilV~T~~ 225 (696)
.++..|++.||+|+ ++.+.
T Consensus 16 ~~A~~L~~~G~~V~----~~~r~ 34 (341)
T PRK08229 16 YLGGRLAAAGADVT----LIGRA 34 (341)
T ss_pred HHHHHHHhcCCcEE----EEecH
Confidence 45667899999998 88764
No 274
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=22.25 E-value=1.1e+02 Score=31.37 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=21.2
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCC
Q 005444 181 LGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 225 (696)
Q Consensus 181 lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~ 225 (696)
+..+.+|++.. .++++|.++|++|+ ++++.
T Consensus 20 itN~SSG~iG~-----------aLA~~L~~~G~~V~----li~r~ 49 (229)
T PRK06732 20 ITNHSTGQLGK-----------IIAETFLAAGHEVT----LVTTK 49 (229)
T ss_pred ecCccchHHHH-----------HHHHHHHhCCCEEE----EEECc
Confidence 45566676654 56677899999998 77654
No 275
>COG0803 LraI ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=22.21 E-value=2e+02 Score=30.71 Aligned_cols=91 Identities=11% Similarity=0.081 Sum_probs=60.2
Q ss_pred hHHHHHHHccccEEEeCCC-CCCCcHHHHHHHHcCC-cEEEc-CCCCcchhhc---c--CCeEEEECCCCHHHHHHHHHH
Q 005444 541 GELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGL-PTFAT-CHGGPAEIIE---H--GASGFHIDPYHPDQAAELMAD 612 (696)
Q Consensus 541 ~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~Gl-PVvat-~~gG~~EiI~---d--g~~G~l~~p~d~e~la~~I~~ 612 (696)
+++. .+++ +|+++.-.. .|+|-..+++...... ++|.. +.=.+...-. + .......+|.+...+++.|.+
T Consensus 74 ~di~-~i~~-ADliv~nG~~le~w~~k~~~~~~~~~~~~i~~s~~i~~~~~~~~~~~g~~dpH~Wldp~na~~~v~~I~~ 151 (303)
T COG0803 74 SDIA-KLRK-ADLIVYNGLGLEPWLEKLLESADKKKVLVIEVSDGIELLPLPGEEEEGVNDPHVWLDPKNAKIYAENIAD 151 (303)
T ss_pred HHHH-HHHh-CCEEEEcCCChHHHHHHHHHhcccCCceEEEccCCccccCCCCccccCCCCCCeecCHHHHHHHHHHHHH
Confidence 3443 4564 888887654 6777777777776654 33332 2111222221 1 245677889999999999999
Q ss_pred HHHhhhcCHHHHHHHHHHHHHHH
Q 005444 613 FFGKCKENPSHWKKISDGGLKRI 635 (696)
Q Consensus 613 ~l~~l~~dp~~~~~m~~~a~~~v 635 (696)
.| +..||+......+|+.++.
T Consensus 152 ~L--~~~dP~~~~~y~~N~~~y~ 172 (303)
T COG0803 152 AL--VELDPENKETYEKNAEAYL 172 (303)
T ss_pred HH--HHhCcccHHHHHHHHHHHH
Confidence 87 4579999888888888776
No 276
>PLN02764 glycosyltransferase family protein
Probab=22.10 E-value=6.5e+02 Score=28.66 Aligned_cols=27 Identities=11% Similarity=0.233 Sum_probs=20.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCccceeEEEeCCC
Q 005444 188 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 226 (696)
Q Consensus 188 G~~vyv~~~~raL~~~L~~~L~~~G~eV~~~ilV~T~~~ 226 (696)
|-..-.+ +|++.|+.+|+.|+ ++|...
T Consensus 17 GHi~P~l--------~LAk~La~~g~~vT----~~tt~~ 43 (453)
T PLN02764 17 GHMTPFL--------FLANKLAEKGHTVT----FLLPKK 43 (453)
T ss_pred ccHHHHH--------HHHHHHHhCCCEEE----EEeCcc
Confidence 6777777 56666788999998 887653
No 277
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=21.67 E-value=9.2e+02 Score=25.90 Aligned_cols=72 Identities=8% Similarity=0.039 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccccCC--hhHHHHHHHccccEEEe-CCCCCCCcHHHHHHHHcCCcEEEcCCCC
Q 005444 511 EIEKMHELMKTYKLDGQFRWIAAQTNRAR--NGELYRYIADTKGAFVQ-PAFYEAFGLTVVEAMTCGLPTFATCHGG 584 (696)
Q Consensus 511 ~~~~l~~li~~~~L~~~V~flG~~~~~v~--~~el~~~la~aadvfV~-PS~~E~fGltvlEAMa~GlPVvat~~gG 584 (696)
..+-+++.++++|. .+.+.+....... ...+-.+++...|.+++ |...++..-.+-+|+..|+|||..+...
T Consensus 41 ~~~Gi~~aa~~~G~--~v~~~~~~~~d~~~q~~~i~~li~~~vdgIiv~~~d~~al~~~l~~a~~~gIpVV~~d~~~ 115 (336)
T PRK15408 41 GGNGAKEAGKELGV--DVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDT 115 (336)
T ss_pred HHHHHHHHHHHhCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHCCCeEEEeCCCC
Confidence 34445566666653 2444331111000 11233445444555444 5445555567788999999999987653
No 278
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=21.59 E-value=9.3e+02 Score=25.11 Aligned_cols=35 Identities=14% Similarity=0.240 Sum_probs=22.2
Q ss_pred hCCCCeEEEE--eCC---------CchHHHHHHhhcCCCcEEEEec
Q 005444 289 LQGFPDFIIG--NYS---------DGNLVASLLAYKMGITQCTIAH 323 (696)
Q Consensus 289 ~~~~pDvIh~--h~~---------~~~l~a~lla~~~gip~v~t~H 323 (696)
+..+||+|++ |.- .+-.-|++-+...|+|-+..-.
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 4568999984 111 1234566677788999776543
No 279
>PF06303 MatP: Organiser of macrodomain of Terminus of chromosome; InterPro: IPR009390 Many bacteria have circular genomes that are large in comparison to their cellular dimensions; this imposes the necessity for compaction of the chromosome during cellular growth, replication, transcription, and segregation. Compaction of chromosomes results in the formation of structures called nucleoids. Nucleoids can be generated by a number of different processes: they include unrestrained DNA supercoiling, formation of a chromatin-like structure through the interaction of DNA binding proteins, condensation by structural maintenance of chromosomes (SMC)-like proteins, and macromolecular crowding []. Chromosome replication and segregation are intimately linked and tightly controlled to ensure that daughter cells each receive a complete copy of the genome. Chromosomes have replication origin (Ori) and termination (Ter) regions that are diametrically opposed. During the process of chromosome replication and cell division the Ori and Ter regions form two macrodomains (MDs), the Ori MD is centred on migS, a 25 bp sequence, that acts as the cis-acting site for the bipolar positioning of oriC []. The Ter MD is centred on dif (deletion-induced filamentation), which is a resolvase site that reduces chromosome multimers to monomers []. The Ori and Ter MDs are insulated from one and other by non-structural regions and other nucleoids. Chromosome replication initiates bidirectionally from oriC. Within the Ori MD with sister chromatids being located in separate cell halves and with the Ter macrodomain anchored to the cell pole. Cell division occurs with the completion of replication of the Ter region and the subsequent separation of the two sister chromatids [, ]. This entry contains MatP (YcbG), which is a component of the MatP/MatS site-specific system that organises the Ter macrodomain (MD) in Escherichia coli (strain K12) and related enterobacteria during replication of the chromosome. In E. coli there are 23 matS sequences, located in the Ter region which is centred on dif. The matS consensus is a palindromic sequence 5'-GTGAC[AG][CT]GTCAC, which is the recognition sequence for MatP. MatP binds to the matS sequences; and is critical for Ter MD formation. Inactivation of matP causes severe defects in chromosome segregation and cell division revealing its role as a major organiser of the Ter MD [].
Probab=21.53 E-value=90 Score=29.52 Aligned_cols=66 Identities=20% Similarity=0.346 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHh
Q 005444 601 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRR 671 (696)
Q Consensus 601 ~d~e~la~~I~~~l~~l~~dp~~~~~m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~~~~ 671 (696)
++|..+-+-|.+-+ +|+.+.+|.+..+++=.++|+-+....+--++==.|..|.-++.+.++.-..
T Consensus 49 ~~P~~v~~WI~~~m-----~~~l~nklkQaIRArRkR~fnae~~~t~kKSIDLey~vW~rLS~lA~~~g~T 114 (148)
T PF06303_consen 49 NEPVKVNEWIKKHM-----NPELWNKLKQAIRARRKRHFNAEHQHTRKKSIDLEYRVWQRLSALAQRRGMT 114 (148)
T ss_pred cChHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHhhccccccCCCcceeeecHHHHHHHHHHHHHcCCc
Confidence 35666666665544 8999999999998888788888877666666655688899988888876433
No 280
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=21.16 E-value=5.5e+02 Score=26.87 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=20.9
Q ss_pred HHHHHH--ccccEEEeCCC-CCCCcHHHHHHHH--cCCcEEE
Q 005444 543 LYRYIA--DTKGAFVQPAF-YEAFGLTVVEAMT--CGLPTFA 579 (696)
Q Consensus 543 l~~~la--~aadvfV~PS~-~E~fGltvlEAMa--~GlPVva 579 (696)
+...+. + .|+++=.|- .-.|---++++|+ |-.|+|-
T Consensus 98 L~eav~~~k-ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 138 (254)
T cd00762 98 LEDAVEAAK-PDFLIGVSRVGGAFTPEVIRAXAEINERPVIF 138 (254)
T ss_pred HHHHHHhhC-CCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEE
Confidence 444444 3 677776554 4456666777776 4455554
No 281
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=21.15 E-value=1.2e+02 Score=28.26 Aligned_cols=35 Identities=11% Similarity=0.398 Sum_probs=21.7
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 216 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~ 216 (696)
|||++|+ |. |...|....+. +.+++.+.+.|+++.
T Consensus 1 Mkilii~--gS---------~r~~~~t~~l~-------~~~~~~l~~~g~e~~ 35 (152)
T PF03358_consen 1 MKILIIN--GS---------PRKNSNTRKLA-------EAVAEQLEEAGAEVE 35 (152)
T ss_dssp -EEEEEE--SS---------SSTTSHHHHHH-------HHHHHHHHHTTEEEE
T ss_pred CEEEEEE--Cc---------CCCCCHHHHHH-------HHHHHHHHHcCCEEE
Confidence 7999996 22 33345443333 356667888899998
No 282
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=21.00 E-value=2e+02 Score=29.58 Aligned_cols=33 Identities=21% Similarity=0.562 Sum_probs=20.7
Q ss_pred eeEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 005444 163 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 216 (696)
Q Consensus 163 ~~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~ 216 (696)
.++|++|.+|-- . .++| .|| ....++++|++|.
T Consensus 10 ~~~vL~v~aHPD--D-e~~g---~gg---------------tla~~~~~G~~V~ 42 (237)
T COG2120 10 PLRVLVVFAHPD--D-EEIG---CGG---------------TLAKLAARGVEVT 42 (237)
T ss_pred CCcEEEEecCCc--c-hhhc---cHH---------------HHHHHHHCCCeEE
Confidence 579999999943 1 1121 232 2224689999998
No 283
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=20.99 E-value=7.8e+02 Score=25.73 Aligned_cols=35 Identities=29% Similarity=0.454 Sum_probs=23.0
Q ss_pred CCCeEEEE--eC----C-----CchHHHHHHhhcCCCcEEEEecCC
Q 005444 291 GFPDFIIG--NY----S-----DGNLVASLLAYKMGITQCTIAHAL 325 (696)
Q Consensus 291 ~~pDvIh~--h~----~-----~~~l~a~lla~~~gip~v~t~H~l 325 (696)
.+||+|.+ |. . .+...|++=+..+|+|-|..-+..
T Consensus 82 ~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 82 PRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred CCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 35999984 21 1 133566677788999988776653
No 284
>TIGR03481 HpnM hopanoid biosynthesis associated membrane protein HpnM. The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins are members of the pfam05494 family of putative transporters known as "toluene tolerance protein Ttg2D", although it is unlikely that the members included here have anything to do with toluene per-se.
Probab=20.93 E-value=4.2e+02 Score=26.44 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhHHhcHHHHHH----HHhHHhHhh
Q 005444 627 ISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRE----TRRYLEMFY 677 (696)
Q Consensus 627 m~~~a~~~v~~~ysw~~~a~~l~~ly~~y~~~~~~~~~~~~~----~~~~~~~~~ 677 (696)
..+.-...+...|+.+.+++..+-- .|+.++++||++ -++||.--|
T Consensus 52 ~~~~l~~iv~~~~Df~~mar~vLG~-----~W~~~s~~Qr~~F~~~F~~~l~~tY 101 (198)
T TIGR03481 52 RYTKLAPAVREAFDLPAMARLTLGS-----SWTSLSPEQRRRFIGAFRELSIATY 101 (198)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHhhh-----hhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 3445566677789999999988774 699999999986 344444444
No 285
>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d
Probab=20.89 E-value=3.4e+02 Score=23.54 Aligned_cols=74 Identities=20% Similarity=0.289 Sum_probs=44.4
Q ss_pred EEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccccEEEeCCCCCCCcHHHHH-
Q 005444 491 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVE- 569 (696)
Q Consensus 491 LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlE- 569 (696)
|+++|+|... . -..+++++.+++.|++-.|.-. +..++.....+ .|+++..... .+-..-++
T Consensus 3 l~~Cg~G~sT-------S-~~~~ki~~~~~~~~~~~~v~~~-------~~~~~~~~~~~-~Diil~~Pqv-~~~~~~i~~ 65 (96)
T cd05564 3 LLVCSAGMST-------S-ILVKKMKKAAEKRGIDAEIEAV-------PESELEEYIDD-ADVVLLGPQV-RYMLDEVKK 65 (96)
T ss_pred EEEcCCCchH-------H-HHHHHHHHHHHHCCCceEEEEe-------cHHHHHHhcCC-CCEEEEChhH-HHHHHHHHH
Confidence 6777887651 1 2356899999999987444444 34566555554 8887765321 11222233
Q ss_pred -HHHcCCcEEEcC
Q 005444 570 -AMTCGLPTFATC 581 (696)
Q Consensus 570 -AMa~GlPVvat~ 581 (696)
+.-.++||..-+
T Consensus 66 ~~~~~~~pv~~I~ 78 (96)
T cd05564 66 KAAEYGIPVAVID 78 (96)
T ss_pred HhccCCCcEEEcC
Confidence 345788887754
No 286
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=20.74 E-value=4e+02 Score=28.03 Aligned_cols=14 Identities=21% Similarity=0.453 Sum_probs=11.7
Q ss_pred HHHHHHHHcCCCcc
Q 005444 203 EMLLRIKRQGLDIS 216 (696)
Q Consensus 203 ~L~~~L~~~G~eV~ 216 (696)
.|+-+++++||||.
T Consensus 35 ~mAiefAeAGHDVV 48 (340)
T COG4007 35 RMAIEFAEAGHDVV 48 (340)
T ss_pred HHHHHHHHcCCcEE
Confidence 56777999999995
No 287
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.57 E-value=8.4e+02 Score=24.15 Aligned_cols=109 Identities=9% Similarity=0.060 Sum_probs=62.5
Q ss_pred ccccccCChHHHHHHHHHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHH
Q 005444 464 ARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 543 (696)
Q Consensus 464 GRL~~~Kgi~~Llea~~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el 543 (696)
|..++..+...+-+.+.... ....+++++.....+ + .++.+.+.+..+++|........-. ..+..++
T Consensus 7 G~~~~~~~~~~~~~~~~~~~--~~~~~i~~iptA~~~-----~--~~~~~~~~~~~~~lG~~~~~~~~~~---~~~~~~~ 74 (210)
T cd03129 7 GGLDKAHARPILQDFLARAG--GAGARVLFIPTASGD-----R--DEYGEEYRAAFERLGVEVVHLLLID---TANDPDV 74 (210)
T ss_pred CCcCccChHHHHHHHHHHcC--CCCCeEEEEeCCCCC-----h--HHHHHHHHHHHHHcCCceEEEeccC---CCCCHHH
Confidence 33333334334444444332 245778888766541 1 1335667777778887543222211 1345788
Q ss_pred HHHHHccccEEEeCCC--------C-CC-CcHHHHHHHHcCCcEEEcCCCCc
Q 005444 544 YRYIADTKGAFVQPAF--------Y-EA-FGLTVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 544 ~~~la~aadvfV~PS~--------~-E~-fGltvlEAMa~GlPVvat~~gG~ 585 (696)
.+.+.. +|+++++-- + +. .--.+.+....|+|++.+..|..
T Consensus 75 ~~~l~~-ad~I~~~GG~~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 75 VARLLE-ADGIFVGGGNQLRLLSVLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred HHHHhh-CCEEEEcCCcHHHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 888885 888887621 1 22 22247888889999999876653
No 288
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=20.48 E-value=2.9e+02 Score=27.33 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=26.5
Q ss_pred CCCCeEEEEeCCCchHHHHHHhhcCCCcEEE
Q 005444 290 QGFPDFIIGNYSDGNLVASLLAYKMGITQCT 320 (696)
Q Consensus 290 ~~~pDvIh~h~~~~~l~a~lla~~~gip~v~ 320 (696)
..++|+|.+-...+-.+|..+|..+++|+++
T Consensus 49 ~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~ 79 (187)
T PRK12560 49 DKDIDKIVTEEDKGAPLATPVSLLSGKPLAM 79 (187)
T ss_pred CCCCCEEEEEccccHHHHHHHHHhhCCCEEE
Confidence 5589999998888888889899999999755
No 289
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=20.47 E-value=4.3e+02 Score=26.43 Aligned_cols=38 Identities=11% Similarity=-0.063 Sum_probs=18.0
Q ss_pred CCCeEEEEeCCCchHHHHHHhhcCCCcEEEEecCCCccCC
Q 005444 291 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKY 330 (696)
Q Consensus 291 ~~pDvIh~h~~~~~l~a~lla~~~gip~v~t~H~l~~~~~ 330 (696)
.+||+|++..+..-+-..++... ... ++.+|..--.+|
T Consensus 79 ~~~D~iv~~~~~~ii~~~~l~~~-~~~-~iNiHpslLP~y 116 (200)
T PRK05647 79 YQPDLVVLAGFMRILGPTFVSAY-EGR-IINIHPSLLPSF 116 (200)
T ss_pred hCcCEEEhHHhhhhCCHHHHhhc-cCC-EEEEeCccccCC
Confidence 38999986544322222222221 112 566776433333
No 290
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=20.38 E-value=1.8e+02 Score=29.16 Aligned_cols=37 Identities=27% Similarity=0.356 Sum_probs=16.9
Q ss_pred eEEEEEccccccCCcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 005444 164 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 216 (696)
Q Consensus 164 ~rI~iis~h~~~~~~~~lG~p~tGG~~vyv~~~~raL~~~L~~~L~~~G~eV~ 216 (696)
.|.-++|.||+ |........|.++| .+.|.+.+++.+
T Consensus 3 ~k~riLcLHG~------------~~na~if~~q~~~l----~~~l~~~~~ef~ 39 (212)
T PF03959_consen 3 RKPRILCLHGY------------GQNAEIFRQQTSAL----RKALKKLDFEFV 39 (212)
T ss_dssp ---EEEEE--T------------T--HHHHHHHTHHH----HHHHHHTT-EEE
T ss_pred CCceEEEeCCC------------CcCHHHHHHHHHHH----HHHHhhCcEEEE
Confidence 45667888998 44444555566654 444555466664
No 291
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=20.30 E-value=1.1e+03 Score=25.34 Aligned_cols=138 Identities=11% Similarity=0.104 Sum_probs=81.0
Q ss_pred CCCCEEEEEccccccCChHHHHHHH----HHhhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 005444 455 RSKPIVFSMARLDHVKNMTGLVECY----GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 530 (696)
Q Consensus 455 ~~k~iIl~vGRL~~~Kgi~~Llea~----~~l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 530 (696)
.+.-+|.+.|-+..... ..+.++. .++..+....-.|+|||........+..-....+.+.+++++.+ ..+..
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~v 187 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG--GSLLV 187 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC--CeEEE
Confidence 34557778887776543 2333332 33444434566888888665444444444456678888888876 34555
Q ss_pred eccccccCChhHHHHHHHccc----cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCC--CCcchhhccCCeEEEECCC
Q 005444 531 IAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCH--GGPAEIIEHGASGFHIDPY 601 (696)
Q Consensus 531 lG~~~~~v~~~el~~~la~aa----dvfV~PS~~E~fGltvlEAMa~GlPVvat~~--gG~~EiI~dg~~G~l~~p~ 601 (696)
+.+ +-...++...+.+.. .+.+. ..++ .+-+.+.+++.--+|+|.. .=+.|.+..|.--++++..
T Consensus 188 ttS---RRTp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~ 258 (311)
T PF06258_consen 188 TTS---RRTPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLP 258 (311)
T ss_pred EcC---CCCcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCC
Confidence 543 222334444444322 23344 2233 4468899999999999943 3457888777777777654
No 292
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=20.09 E-value=9.4e+02 Score=24.58 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=61.4
Q ss_pred HHHHHHHHH-hhccCCCeEEEEEeCccCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccccCChhHHHHHHHccc
Q 005444 473 TGLVECYGK-NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 551 (696)
Q Consensus 473 ~~Llea~~~-l~~~~~~~~LvIvG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aa 551 (696)
+.+...+.. +...++.+.|+=.. +.|.+...+.++.++..+++|+.- .=+.. ...+.+++-..+.+ +
T Consensus 18 ~~~~~~i~n~l~g~~~~i~FIPtA-------s~~~~~~~Yv~k~~~~l~~lg~~v--~~L~l--~~~~~~~Ie~~l~~-~ 85 (224)
T COG3340 18 EHFLPFIANFLQGKRKTIAFIPTA-------SVDSEDDFYVEKVRNALAKLGLEV--SELHL--SKPPLAAIENKLMK-A 85 (224)
T ss_pred hhhhHHHHHHhcCCCceEEEEecC-------ccccchHHHHHHHHHHHHHcCCee--eeeec--cCCCHHHHHHhhhh-c
Confidence 334444444 33334455555333 334566778888999899988742 22211 15567889999986 8
Q ss_pred cEEEeCCCCCCC---------cH--HHHHHHHcCCcEEEcCCCCc
Q 005444 552 GAFVQPAFYEAF---------GL--TVVEAMTCGLPTFATCHGGP 585 (696)
Q Consensus 552 dvfV~PS~~E~f---------Gl--tvlEAMa~GlPVvat~~gG~ 585 (696)
|+..+-- .+.| |+ .+.|+...|+|.|....|..
T Consensus 86 d~IyVgG-GNTF~LL~~lke~gld~iIr~~vk~G~~YiG~SAGA~ 129 (224)
T COG3340 86 DIIYVGG-GNTFNLLQELKETGLDDIIRERVKAGTPYIGWSAGAN 129 (224)
T ss_pred cEEEECC-chHHHHHHHHHHhCcHHHHHHHHHcCCceEEeccCce
Confidence 8766531 1111 22 36899999999999766653
No 293
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=20.02 E-value=1.1e+02 Score=27.62 Aligned_cols=26 Identities=23% Similarity=0.295 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEeCCCc
Q 005444 275 ETFTEDVGSEITAELQGFPDFIIGNYSDG 303 (696)
Q Consensus 275 ~~f~~~~~~~i~~~~~~~pDvIh~h~~~~ 303 (696)
......+.+.+... +||+|+++.+.+
T Consensus 86 ~~~~~~l~~~i~~~---~p~~V~t~~~~~ 111 (128)
T PF02585_consen 86 EELVRDLEDLIREF---RPDVVFTPDPDD 111 (128)
T ss_dssp HHHHHHHHHHHHHH----ESEEEEE-STT
T ss_pred HHHHHHHHHHHHHc---CCCEEEECCCCC
Confidence 34445555555544 899999987655
Done!