AmiGO: BLAST Results


BLAST match view associations BLAST with PAPS1 PAPS1 PAPS1 poly(A) polymerase 1	protein from Arabidopsis thaliana	8.4e-210
BLAST match view associations BLAST with nPAP nPAP nPAP nuclear poly(a) polymerase	protein from Arabidopsis thaliana	5.5e-169
BLAST match view associations BLAST with PAPS2 PAPS2 PAPS2 poly(A) polymerase 2	protein from Arabidopsis thaliana	1.5e-164
BLAST match view associations BLAST with papA papA papA poly(A) polymerase	gene from Dictyostelium discoideum	7.0e-113
BLAST match view associations BLAST with papola papola papola poly(A) polymerase alpha	gene_product from Danio rerio	5.0e-104
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	5.0e-104
BLAST match view associations BLAST with papolg papolg papolg poly(A) polymerase gamma	gene_product from Danio rerio	3.6e-103
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	gene from Rattus norvegicus	2.1e-101
BLAST match view associations BLAST with hrg hrg hrg hiiragi	protein from Drosophila melanogaster	8.0e-100
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG PAPOLG protein	protein from Bos taurus	2.3e-99
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	2.9e-99
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	protein from Mus musculus	3.4e-99
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Sus scrofa	6.0e-99
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	protein from Mus musculus	7.6e-99
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	protein from Mus musculus	7.6e-99
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	1.2e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	1.2e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	1.2e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Canis lupus familiaris	1.6e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	1.6e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	1.6e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	2.0e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	2.0e-98
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	3.3e-98
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Uncharacterized protein	protein from Sus scrofa	8.7e-98
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Poly(A) polymerase beta	protein from Homo sapiens	9.8e-97
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	gene from Rattus norvegicus	1.4e-95
BLAST match view associations BLAST with F1NL95 F1NL95 F1NL95 Uncharacterized protein	protein from Gallus gallus	7.8e-95
BLAST match view associations BLAST with F1P3A1 F1P3A1 F1P3A1 Uncharacterized protein	protein from Gallus gallus	7.8e-95
BLAST match view associations BLAST with F43G6.5 F43G6.5 F43G6.5	gene from Caenorhabditis elegans	6.2e-93
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6	gene from Caenorhabditis elegans	1.0e-90
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6 Protein T15H9.6	protein from Caenorhabditis elegans	1.0e-90
BLAST match view associations BLAST with pap-1 pap-1 pap-1	gene from Caenorhabditis elegans	2.4e-87
BLAST match view associations BLAST with pap-1 pap-1 pap-1 Protein PAP-1	protein from Caenorhabditis elegans	2.4e-87
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w poly(A) polymerase PAP, putative	gene from Plasmodium falciparum	2.9e-86
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w Poly(A) polymerase PAP, putative	protein from Plasmodium falciparum 3D7	2.9e-86
BLAST match view associations BLAST with PAP1 PAP1 PAP1	gene_product from Candida albicans	5.9e-86
BLAST match view associations BLAST with PAPA PAPA PAPA Poly(A) polymerase PAPa	protein from Candida albicans SC5314	5.9e-86
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	6.2e-85
BLAST match view associations BLAST with PAP1 PAP1 PAP1 Poly(A) polymerase, one of three factors required for mRNA 3'-end pol	gene from Saccharomyces cerevisiae	3.1e-83
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	gene from Rattus norvegicus	3.0e-77
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	5.1e-58
BLAST match view associations BLAST with PAPS3 PAPS3 PAPS3 AT3G06560	protein from Arabidopsis thaliana	1.4e-57
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	2.9e-52
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	9.0e-43
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	1.1e-16
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	2.3e-14
BLAST match view associations BLAST with MGG_06121 MGG_06121 MGG_06121 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	7.2e-13
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	3.9e-12
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	3.0e-10
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	0.00014
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	0.00023
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  005445
        (696 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030943 - symbol:PAPS1 "poly(A) polymerase 1" ...  1846  8.4e-210  2
TAIR|locus:2134113 - symbol:nPAP "nuclear poly(a) polymer...  1505  5.5e-169  2
TAIR|locus:2043560 - symbol:PAPS2 "poly(A) polymerase 2" ...  1473  1.5e-164  2
DICTYBASE|DDB_G0288259 - symbol:papA "poly(A) polymerase"...  1007  7.0e-113  2
ZFIN|ZDB-GENE-030131-3507 - symbol:papola "poly(A) polyme...   917  5.0e-104  3
UNIPROTKB|Q9BWT3 - symbol:PAPOLG "Poly(A) polymerase gamm...   910  5.0e-104  3
ZFIN|ZDB-GENE-040426-1256 - symbol:papolg "poly(A) polyme...   956  3.6e-103  2
RGD|1310337 - symbol:Papolg "poly(A) polymerase gamma" sp...   909  2.1e-101  3
FB|FBgn0015949 - symbol:hrg "hiiragi" species:7227 "Droso...   852  8.0e-100  3
UNIPROTKB|A5D7N5 - symbol:PAPOLG "Uncharacterized protein...   915  2.3e-99   2
UNIPROTKB|F1NKG9 - symbol:PAPOLA "Uncharacterized protein...   902  2.9e-99   2
MGI|MGI:1932115 - symbol:Papolb "poly (A) polymerase beta...   885  3.4e-99   3
UNIPROTKB|F1SQL7 - symbol:PAPOLG "Uncharacterized protein...   911  6.0e-99   2
MGI|MGI:2442119 - symbol:Papolg "poly(A) polymerase gamma...   910  7.6e-99   2
MGI|MGI:109301 - symbol:Papola "poly (A) polymerase alpha...   899  7.6e-99   2
UNIPROTKB|G3MYA2 - symbol:PAPOLA "Poly(A) polymerase alph...   896  1.2e-98   2
UNIPROTKB|P25500 - symbol:PAPOLA "Poly(A) polymerase alph...   896  1.2e-98   2
UNIPROTKB|Q3T0A2 - symbol:PAPOLA "Poly(A) polymerase alph...   896  1.2e-98   2
UNIPROTKB|F1PDS0 - symbol:PAPOLA "Uncharacterized protein...   896  1.6e-98   2
UNIPROTKB|F1SAQ7 - symbol:PAPOLA "Uncharacterized protein...   896  1.6e-98   2
UNIPROTKB|I3L6F0 - symbol:PAPOLA "Uncharacterized protein...   896  1.6e-98   2
UNIPROTKB|G3XAH6 - symbol:PAPOLA "Poly(A) polymerase alph...   896  2.0e-98   2
UNIPROTKB|P51003 - symbol:PAPOLA "Poly(A) polymerase alph...   896  2.0e-98   2
UNIPROTKB|J9NS30 - symbol:PAPOLG "Uncharacterized protein...   904  3.3e-98   2
UNIPROTKB|I3LRR6 - symbol:PAPOLB "Uncharacterized protein...   900  8.7e-98   2
UNIPROTKB|Q9NRJ5 - symbol:PAPOLB "Poly(A) polymerase beta...   890  9.8e-97   2
RGD|1310946 - symbol:Papolb "poly (A) polymerase beta (te...   881  1.4e-95   2
UNIPROTKB|F1NL95 - symbol:F1NL95 "Uncharacterized protein...   870  7.8e-95   2
UNIPROTKB|F1P3A1 - symbol:F1P3A1 "Uncharacterized protein...   870  7.8e-95   2
WB|WBGene00009658 - symbol:F43G6.5 species:6239 "Caenorha...   848  6.2e-93   2
WB|WBGene00011791 - symbol:T15H9.6 species:6239 "Caenorha...   839  1.0e-90   2
UNIPROTKB|Q09995 - symbol:T15H9.6 "Protein T15H9.6" speci...   839  1.0e-90   2
POMBASE|SPBC646.04 - symbol:pla1 "poly(A) polymerase Pla1...   822  1.7e-88   2
WB|WBGene00012528 - symbol:pap-1 species:6239 "Caenorhabd...   797  2.4e-87   2
UNIPROTKB|Q9U2P3 - symbol:pap-1 "Protein PAP-1" species:6...   797  2.4e-87   2
GENEDB_PFALCIPARUM|PFF1240w - symbol:PFF1240w "poly(A) po...   617  2.9e-86   3
UNIPROTKB|C6KT92 - symbol:PFF1240w "Poly(A) polymerase PA...   617  2.9e-86   3
CGD|CAL0002451 - symbol:PAP1 species:5476 "Candida albica...   785  5.9e-86   3
UNIPROTKB|Q9UW26 - symbol:PAPA "Poly(A) polymerase PAPa" ...   785  5.9e-86   3
UNIPROTKB|F1NDP1 - symbol:PAPOLA "Uncharacterized protein...   850  6.2e-85   1
SGD|S000001710 - symbol:PAP1 "Poly(A) polymerase, one of ...   791  3.1e-83   2
RGD|1308673 - symbol:Papola "poly (A) polymerase alpha" s...   631  3.0e-77   3
UNIPROTKB|D4A764 - symbol:Papola "Protein Papola" species...   547  2.5e-68   3
UNIPROTKB|H0YJ00 - symbol:PAPOLA "Poly(A) polymerase alph...   596  5.1e-58   1
TAIR|locus:2084274 - symbol:PAPS3 "poly(A) polymerase 3" ...   592  1.4e-57   1
UNIPROTKB|F8WAT4 - symbol:PAPOLG "Poly(A) polymerase gamm...   519  2.9e-52   2
UNIPROTKB|G3V2A0 - symbol:PAPOLA "Poly(A) polymerase alph...   453  9.0e-43   1
UNIPROTKB|H7C3W0 - symbol:PAPOLG "Poly(A) polymerase gamm...   147  1.1e-16   2
UNIPROTKB|G3V3I9 - symbol:PAPOLA "Poly(A) polymerase alph...   134  2.3e-14   2
UNIPROTKB|G4N5I8 - symbol:MGG_06121 "Uncharacterized prot...   208  7.2e-13   1
UNIPROTKB|Q59G05 - symbol:PAPOLG "Poly(A) polymerase gamm...   177  3.9e-12   2
UNIPROTKB|F1PYB9 - symbol:PAPOLG "Uncharacterized protein...   176  3.0e-10   1
UNIPROTKB|F1NDP2 - symbol:PAPOLA "Uncharacterized protein...   103  0.00014   1
UNIPROTKB|G3V457 - symbol:PAPOLA "Poly(A) polymerase alph...   101  0.00023   1


>TAIR|locus:2030943 [details] [associations]
            symbol:PAPS1 "poly(A) polymerase 1" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0043631 "RNA
            polyadenylation" evidence=IDA] [GO:0000278 "mitotic cell cycle"
            evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006351 EMBL:AC034106
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
            UniGene:At.26787 UniGene:At.73166 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500 BRENDA:2.7.7.19
            EMBL:BT005990 EMBL:AY323906 EMBL:AK227446 IPI:IPI00540119
            PIR:B86315 RefSeq:NP_173240.2 ProteinModelPortal:Q9LMT2 SMR:Q9LMT2
            IntAct:Q9LMT2 STRING:Q9LMT2 PaxDb:Q9LMT2 PRIDE:Q9LMT2
            EnsemblPlants:AT1G17980.1 GeneID:838378 KEGG:ath:AT1G17980
            TAIR:At1g17980 InParanoid:Q9LMT2 OMA:WDTLFEP PhylomeDB:Q9LMT2
            ProtClustDB:CLSN2680711 Genevestigator:Q9LMT2 Uniprot:Q9LMT2
        Length = 713

 Score = 1846 (654.9 bits), Expect = 8.4e-210, Sum P(2) = 8.4e-210
 Identities = 350/455 (76%), Positives = 386/455 (84%)

Query:    26 MRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPGADIDTLCVGPRHATREEDFFG 85
             ++T    K L D  L+E+  +  +      RL  VHGPGADIDTLCVGPRHATRE DFFG
Sbjct:    67 IKTISRAKGLNDQLLHEANAKIFTFGSY--RLG-VHGPGADIDTLCVGPRHATREGDFFG 123

Query:    86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
             EL +ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQ
Sbjct:   124 ELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQ 183

Query:   146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
             NADEQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWAL
Sbjct:   184 NADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWAL 243

Query:   206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
             LVARICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H
Sbjct:   244 LVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLH 303

Query:   266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
             +MPIITPAYPCMNSSYNVS STLRIM  EFQRG+EICEAME N+AD  WDTLFEPF FFE
Sbjct:   304 IMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKAD--WDTLFEPFAFFE 361

Query:   326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
             AYKNYL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL
Sbjct:   362 AYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPL 420

Query:   386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
             +CSYFMGLQRKQGVP  EGEQFDIR TV+EFK  V+ YTL  PGM+ISV H+ RR+LPNF
Sbjct:   421 HCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNF 480

Query:   446 VFPGGVRPSRPSKGTWDS-RRALERKVSSHTKPGA 479
             VFPGGVRPS  SKGTWDS RR+  R  S+ + P A
Sbjct:   481 VFPGGVRPSHTSKGTWDSNRRSEHRNSSTSSAPAA 515

 Score = 205 (77.2 bits), Expect = 8.4e-210, Sum P(2) = 8.4e-210
 Identities = 38/56 (67%), Positives = 50/56 (89%)

Query:     5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             NGQR G++EPIS+ GPT+ D+++TR+LEK+L+DV LYES+EEAV REEVLG LDQ+
Sbjct:     7 NGQRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQI 62


>TAIR|locus:2134113 [details] [associations]
            symbol:nPAP "nuclear poly(a) polymerase" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0031123
            "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000911 "cytokinesis by cell plate formation"
            evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA catabolic
            process" evidence=RCA] [GO:0006623 "protein targeting to vacuole"
            evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
            [GO:0016192 "vesicle-mediated transport" evidence=RCA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002687
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00656923
            RefSeq:NP_001031779.1 UniGene:At.25084 ProteinModelPortal:F4JV63
            SMR:F4JV63 PRIDE:F4JV63 EnsemblPlants:AT4G32850.8 GeneID:829421
            KEGG:ath:AT4G32850 OMA:EDQLEWC PhylomeDB:F4JV63 Uniprot:F4JV63
        Length = 765

 Score = 1505 (534.8 bits), Expect = 5.5e-169, Sum P(2) = 5.5e-169
 Identities = 296/506 (58%), Positives = 356/506 (70%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VHGPGADIDTLCVGP +  REEDFF  LH +L EM EVTELHPVPDAHVPVMKFKF G+ 
Sbjct:   108 VHGPGADIDTLCVGPSYVNREEDFFIILHDILAEMEEVTELHPVPDAHVPVMKFKFQGIP 167

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDLLYA +SL V+P+DLDIS  S+L   DE TVRSLNGCRV DQIL+LVP  ++FRTTLR
Sbjct:   168 IDLLYASISLLVVPQDLDISSSSVLCEVDEPTVRSLNGCRVADQILKLVPNFEHFRTTLR 227

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
             C+++WAK+RGVYSNV GFLGG+NWALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV
Sbjct:   228 CLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPV 287

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             +LCAIEE  LG  VWD R+N +D+YHLMPIITPAYPCMNSSYNVS STLR+M ++FQ G+
Sbjct:   288 MLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGN 347

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +E N+    W +LFE + FFEAYKNYL++DI A +A+DL  WKGWVESR RQLTL
Sbjct:   348 NILQEIELNKQH--WSSLFEQYMFFEAYKNYLQVDIVAADAEDLLAWKGWVESRFRQLTL 405

Query:   360 KIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
             KIER T  ML CHP P ++ D ++  L+C++FMGLQR +GV   E +QFDIR TV EF+Q
Sbjct:   406 KIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIRGTVDEFRQ 465

Query:   419 AVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG-TWDSRRALERKVSSHTKP 477
              V+MY   KPGM + V+HV RR LP FVFP G R  R S+       ++ E    SH+  
Sbjct:   466 EVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGEDGSVSHSGS 525

Query:   478 GADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF--REGXXXXXXXXXXXXNLQFEHMD 535
               +   KRK   + +D      +  A++   S +    E             NL+    +
Sbjct:   526 VVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTPPVCNLRRPPSE 585

Query:   536 ANELAGSNREKVENNLTDSIRGSRNS 561
               E    N E  E  LTD  R   NS
Sbjct:   586 EIEADNLNTECTE--LTDLARNECNS 609

 Score = 160 (61.4 bits), Expect = 5.5e-169, Sum P(2) = 5.5e-169
 Identities = 30/51 (58%), Positives = 41/51 (80%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT+P+SLAGP+  D+ R  +LEKYL D  LYES+++ + REEVLGR+DQ+
Sbjct:    22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQI 72


>TAIR|locus:2043560 [details] [associations]
            symbol:PAPS2 "poly(A) polymerase 2" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA;ISS]
            [GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006397 "mRNA processing" evidence=RCA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006351 GO:GO:0003723 EMBL:AC005395
            GO:GO:0004652 GO:GO:0043631 KO:K14376 eggNOG:COG5186
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376 HSSP:P25500
            EMBL:AF255297 EMBL:AY039974 EMBL:AY074533 IPI:IPI00518420
            PIR:E84653 RefSeq:NP_565611.1 UniGene:At.14867 SMR:O82312
            IntAct:O82312 STRING:O82312 EnsemblPlants:AT2G25850.2 GeneID:817127
            KEGG:ath:AT2G25850 TAIR:At2g25850 InParanoid:O82312 OMA:MGSESIN
            ProtClustDB:CLSN2688428 BRENDA:2.7.7.19 Genevestigator:O82312
            Uniprot:O82312
        Length = 800

 Score = 1473 (523.6 bits), Expect = 1.5e-164, Sum P(2) = 1.5e-164
 Identities = 284/462 (61%), Positives = 342/462 (74%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VHGP ADIDTLCVGP +  REEDFF     +L EM EVTEL PV DAHVPVMKFKF G+S
Sbjct:   110 VHGPMADIDTLCVGPSYVNREEDFFIFFRDILAEMEEVTELQPVTDAHVPVMKFKFQGIS 169

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDLLYA +SL VIP+DLDIS  S+L + DEQTVRSLNGCRV DQIL+LVP  ++FRTTLR
Sbjct:   170 IDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLR 229

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
             C+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ YPNA+PSMLVSRFFRVYTQWRWPNPV
Sbjct:   230 CLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPNAIPSMLVSRFFRVYTQWRWPNPV 289

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             +LCAIEE  L   VWDPR+N +D+YHLMPIITPAYPCMNSSYNVS STLR+M ++FQ G+
Sbjct:   290 MLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGN 349

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              IC+ +E N+    W +LF+ + FFEAYKNYL++D+ A +A+DL  WKGWVESR RQLTL
Sbjct:   350 TICQEIELNKQH--WSSLFQQYMFFEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTL 407

Query:   360 KIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
             KIER T  ML CHP P ++ D SK   +C++FMGLQR  G    E +QFDIR TV EF+Q
Sbjct:   408 KIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGGQECQQFDIRGTVDEFRQ 467

Query:   419 AVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG-TWDSRRALERKVSSHTKP 477
              V+MY   +PGM + V+HV RR LP+FVFP G + SR S+  +   R   +  V S    
Sbjct:   468 EVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQSQQCREPGDEGVGS-LSD 526

Query:   478 GADDGRKRKQTDDNVDTHL----RNAKC--H---ATMPSSSG 510
               +   KRK  D+ +++      + A C  H   A  P SSG
Sbjct:   527 SVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSG 568

 Score = 150 (57.9 bits), Expect = 1.5e-164, Sum P(2) = 1.5e-164
 Identities = 29/51 (56%), Positives = 40/51 (78%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GITEP+S+AGP+  D+ R  +LEK+L D  LYES+EE + REEV+ R+DQ+
Sbjct:    24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQI 74


>DICTYBASE|DDB_G0288259 [details] [associations]
            symbol:papA "poly(A) polymerase" species:44689
            "Dictyostelium discoideum" [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA;ISS;IBA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
            evidence=ISS;IBA] [GO:0005847 "mRNA cleavage and polyadenylation
            specificity factor complex" evidence=ISS] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            dictyBase:DDB_G0288259 GO:GO:0005524 GO:GO:0046872 GO:GO:0006378
            GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003723
            EMBL:AAFI02000109 GO:GO:0005847 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 HSSP:P25500
            RefSeq:XP_636814.1 ProteinModelPortal:Q54J73 STRING:Q54J73
            EnsemblProtists:DDB0216279 GeneID:8626531 KEGG:ddi:DDB_G0288259
            OMA:NINESST ProtClustDB:PTZ00418 Uniprot:Q54J73
        Length = 809

 Score = 1007 (359.5 bits), Expect = 7.0e-113, Sum P(2) = 7.0e-113
 Identities = 220/476 (46%), Positives = 290/476 (60%)

Query:    42 ESQEEAVSREEVLG--RLDQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTE 99
             ++  E V++    G  RL  VHGPG+DIDTLCVGP+H  R  DFF +L  +L   PE+TE
Sbjct:   121 QTASEVVAKIFTFGSYRLG-VHGPGSDIDTLCVGPKHIMRS-DFFDDLSDILKVHPEITE 178

Query:   100 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGC 158
                V DA VPV+   FSG+ IDL+YA+L+L  IPE+L D+  +S L+N DE+++ SLNGC
Sbjct:   179 FTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKSILSLNGC 238

Query:   159 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 218
             RVTDQIL+LVP I NFR  LRC++ WA RRG+YSN+ GFLGG++WALL ARICQLYPN+ 
Sbjct:   239 RVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARICQLYPNSA 298

Query:   219 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITPAYPCM 277
             PS ++ RFF+VY  W+WP P+LLC I+EG  LG +VW+P+R   DK HLMPIITPAYP M
Sbjct:   299 PSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPIITPAYPSM 355

Query:   278 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 337
             NS+YNVS STL++M  EF RG EI   +E  E    W  L E   FF  Y  Y+ ID  +
Sbjct:   356 NSTYNVSKSTLQLMKSEFVRGAEITRKIETGECT--WKNLLEKCDFFTRYSFYIEIDCYS 413

Query:   338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SKP--LYCSYFM 391
              N +D R W+GW+ES+LR L   +E  T  M    P+P  F++     + P  +  S+FM
Sbjct:   414 MNEEDSRKWEGWIESKLRFLISNLES-TPKMKFAVPYPKGFTNNLHKANNPDQICTSFFM 472

Query:   392 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVFP 448
             GL        G  +  D+   V EF   +  +   +P    M I V ++ ++ LP FV  
Sbjct:   473 GLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFVKD 532

Query:   449 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
              G  P  P K T        +K SS  +P A    ++K   +N D  L + K   T
Sbjct:   533 EG--PEEPVKTT--------KKRSSTGEPSAT---RKKLKSENSDNKLNSPKSPIT 575

 Score = 127 (49.8 bits), Expect = 7.0e-113, Sum P(2) = 7.0e-113
 Identities = 26/52 (50%), Positives = 36/52 (69%)

Query:     9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             LG+TEPIS A P+  D   + +LE  L   NL+ES EE+  REE+LG+L+Q+
Sbjct:    53 LGVTEPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQI 104

 Score = 44 (20.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query:   583 GLSFNSSNSKDAEK 596
             GLSFN SN+  A+K
Sbjct:   473 GLSFNFSNTPGADK 486


>ZFIN|ZDB-GENE-030131-3507 [details] [associations]
            symbol:papola "poly(A) polymerase alpha"
            species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
            activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
            [GO:0005634 "nucleus" evidence=IEA;IBA] [GO:0031123 "RNA 3'-end
            processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IBA]
            [GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 ZFIN:ZDB-GENE-030131-3507 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 EMBL:AL953887 KO:K14376 Gene3D:3.30.70.590
            SUPFAM:SSF55003 CTD:10914 GeneTree:ENSGT00390000017928
            HOGENOM:HOG000204376 HOVERGEN:HBG053502 IPI:IPI00860939
            RefSeq:NP_991321.2 UniGene:Dr.25690 SMR:Q5SNY2
            Ensembl:ENSDART00000053858 GeneID:404041 KEGG:dre:404041
            NextBio:20817515 Uniprot:Q5SNY2
        Length = 723

 Score = 917 (327.9 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
 Identities = 191/417 (45%), Positives = 266/417 (63%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   ++ L E  EV +L  V +A VPV+K  F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERT-DFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPE+LD+  D +L+N D + +RSLNGCRVTD+IL LVP I+NFR TLR
Sbjct:   165 IDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V+++W WPNPV
Sbjct:   225 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   E+ +L L VWDPR  P D+YHLMPIITPAYP  NS+YNVS ST  IM++EF+RG 
Sbjct:   285 LLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + + +N+AD  W  LFE   FF+ YK+Y+ +  SA+       W G VES++R L  
Sbjct:   345 AITDEILQNKAD--WSKLFEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVG 402

Query:   360 KIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGL--QRKQGVP-VGEGEQFDIR- 410
              +E++ +  L     Q  P P + +DK +     + +G+  ++ +G   +     FDI+ 
Sbjct:   403 NLEKNEFITLAHVNPQSFPGPKEGNDKEE-FSTMWVIGIVFKKMEGSENLNVDLTFDIQS 461

Query:   411 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 467
              T   ++QA++     +  M+I+  HV R+ L   +    +  S+  K + D  RA+
Sbjct:   462 FTDTVYRQAITSKMFEQD-MKITAMHVKRKQLHQLLPEVAIHRSK-RKHSSDGVRAM 516

 Score = 104 (41.7 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
 Identities = 24/49 (48%), Positives = 32/49 (65%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
             GIT PISLA P + DL+ TRKL + LR   ++E + E   R  VLG+L+
Sbjct:    20 GITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLN 68

 Score = 43 (20.2 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query:   552 TDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSK-DAEKLAIEK 601
             T  ++G   +   ++H   VDG    +   KG +   S S   +EK   E+
Sbjct:   560 TSELQGKTEATGENTHLASVDGTSSSNASGKGAAPPQSTSPIQSEKKPSEQ 610


>UNIPROTKB|Q9BWT3 [details] [associations]
            symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
            [GO:0006378 "mRNA polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634 EMBL:CH471053
            GO:GO:0046872 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
            EMBL:AY029162 EMBL:AF312211 EMBL:AJ308101 EMBL:AK021867
            EMBL:AK023544 EMBL:AK314663 EMBL:BC111701 EMBL:BC113747
            IPI:IPI00304442 RefSeq:NP_075045.2 UniGene:Hs.387471
            ProteinModelPortal:Q9BWT3 SMR:Q9BWT3 STRING:Q9BWT3
            PhosphoSite:Q9BWT3 DMDM:116242699 PaxDb:Q9BWT3 PRIDE:Q9BWT3
            Ensembl:ENST00000238714 GeneID:64895 KEGG:hsa:64895 UCSC:uc002sai.3
            CTD:64895 GeneCards:GC02P060983 HGNC:HGNC:14982 HPA:CAB017795
            neXtProt:NX_Q9BWT3 PharmGKB:PA32934 InParanoid:Q9BWT3 OMA:IDGSSKR
            OrthoDB:EOG4R23T8 PhylomeDB:Q9BWT3 GenomeRNAi:64895 NextBio:67037
            ArrayExpress:Q9BWT3 Bgee:Q9BWT3 CleanEx:HS_PAPOLG
            Genevestigator:Q9BWT3 GermOnline:ENSG00000115421 Uniprot:Q9BWT3
        Length = 736

 Score = 910 (325.4 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
 Identities = 182/415 (43%), Positives = 260/415 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     +  L  V DA VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL++  I ++LD+  DS L++ D + +RSLNGCRVTD+IL LVP  + FR TLR
Sbjct:   165 IDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV
Sbjct:   225 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVSTST  +M++EF++G 
Sbjct:   285 LLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G VES++R L  
Sbjct:   345 AVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E    D+   ++ 
Sbjct:   403 NLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQS 461

Query:   416 FKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 466
             F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   D  R+
Sbjct:   462 FTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVNRS 515

 Score = 94 (38.1 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL   ++   ++E +EE   R  VLG+L+ +
Sbjct:    20 GITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 70

 Score = 60 (26.2 bits), Expect = 5.0e-104, Sum P(3) = 5.0e-104
 Identities = 21/83 (25%), Positives = 35/83 (42%)

Query:   535 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 591
             D N  +G   S R  ++++  DS R + N    +S   K D P +G+           NS
Sbjct:   511 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 562

Query:   592 KDAEKLAIEKIMSGPYVADQAFP 614
              +   + +EK +S P     + P
Sbjct:   563 AEPAAVIVEKPLSVPPAQGLSIP 585


>ZFIN|ZDB-GENE-040426-1256 [details] [associations]
            symbol:papolg "poly(A) polymerase gamma"
            species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
            activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA;IBA]
            [GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;IBA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            ZFIN:ZDB-GENE-040426-1256 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 KO:K14376 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:64895 EMBL:BC056818
            IPI:IPI00492667 RefSeq:NP_956915.1 UniGene:Dr.79169
            ProteinModelPortal:Q6PGV5 SMR:Q6PGV5 STRING:Q6PGV5 PRIDE:Q6PGV5
            GeneID:393593 KEGG:dre:393593 InParanoid:Q6PGV5 NextBio:20814613
            ArrayExpress:Q6PGV5 Bgee:Q6PGV5 Uniprot:Q6PGV5
        Length = 744

 Score = 956 (341.6 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
 Identities = 192/408 (47%), Positives = 266/408 (65%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L    E+ +L  V DA VPV+KFKF G+ 
Sbjct:   108 VHTKGADIDALCVAPRHVERT-DFFSSFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIE 166

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDLL+ARL+L  IP++LD+  DS+L+N D + +RSLNGCRVTD+IL LVP  +NFR TLR
Sbjct:   167 IDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLR 226

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + LV +FF V+++W WPNPV
Sbjct:   227 AIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPV 286

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   E+ +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVSTST  IM +EF+ G 
Sbjct:   287 LLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMNEEFKNGL 346

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + + + + +AD  W  LFEP  FF+ Y++Y+ +  SA   ++   W G VES++R L  
Sbjct:   347 TVTDEILQGKAD--WSKLFEPPNFFQQYRHYIVLTASASTEENHLEWIGLVESKIRVLVG 404

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ Y  +   +P   PG   ++++  + S +F+G+  K+ +   +    D+   ++ 
Sbjct:   405 NLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGISFKK-LDNSDCVNIDLTYDIQS 463

Query:   416 FKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 459
             F   V    S   + K GM I   HV ++ L +++ P  V+  + S G
Sbjct:   464 FTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPELVQRKKKSLG 511

 Score = 86 (35.3 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query:     2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
             G    +  GIT  ISLA P + D + T+KL + ++   ++E ++E   R  VLG+L+
Sbjct:    14 GQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLN 70


>RGD|1310337 [details] [associations]
            symbol:Papolg "poly(A) polymerase gamma" species:10116 "Rattus
            norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1310337 GO:GO:0005634 GO:GO:0006378
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            CTD:64895 OrthoDB:EOG4R23T8 EMBL:CH473996 IPI:IPI00365079
            RefSeq:NP_001100714.1 UniGene:Rn.27992 Ensembl:ENSRNOT00000008919
            GeneID:305586 KEGG:rno:305586 UCSC:RGD:1310337 NextBio:654829
            Uniprot:D3ZAN6
        Length = 739

 Score = 909 (325.0 bits), Expect = 2.1e-101, Sum P(3) = 2.1e-101
 Identities = 190/435 (43%), Positives = 267/435 (61%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     V  L  V DA VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGVRNLRAVEDAFVPVIKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL++  I ++LD+  DS L++ D + +RSLNGCRVTD+IL LVP  + FR TLR
Sbjct:   165 IDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV
Sbjct:   225 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVSTST  +M++EF++G 
Sbjct:   285 LLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G VES++R L  
Sbjct:   345 AVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E    D+   ++ 
Sbjct:   403 NLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAESVNIDLTYDIQS 461

Query:   416 FKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA---LE 468
             F   V    +   + K GM+I   HV ++ L +++ P  +   +  K   D  R+   L+
Sbjct:   462 FTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQKK-KKSLSDVSRSSGGLQ 519

Query:   469 RKVSSHTKPGADDGR 483
              K SS      D  R
Sbjct:   520 SKRSSLDSNCLDSSR 534

 Score = 91 (37.1 bits), Expect = 2.1e-101, Sum P(3) = 2.1e-101
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL   ++   ++E +EE   R  VLG+L+ +
Sbjct:    20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 70

 Score = 39 (18.8 bits), Expect = 2.1e-101, Sum P(3) = 2.1e-101
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query:   445 FVFPGGV-RPSRPSKGTWDSRRA 466
             F  PG   +PS P   T D+ R+
Sbjct:   542 FNSPGSAHKPSNPDSPTGDAERS 564


>FB|FBgn0015949 [details] [associations]
            symbol:hrg "hiiragi" species:7227 "Drosophila melanogaster"
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=ISS;IDA;NAS] [GO:0006378 "mRNA polyadenylation"
            evidence=ISS;IBA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HSSP:P25500 EMBL:AY113434 ProteinModelPortal:Q8MZ09
            SMR:Q8MZ09 STRING:Q8MZ09 PaxDb:Q8MZ09 PRIDE:Q8MZ09
            FlyBase:FBgn0015949 InParanoid:Q8MZ09 OrthoDB:EOG42547T ChiTaRS:HRG
            ArrayExpress:Q8MZ09 Bgee:Q8MZ09 Uniprot:Q8MZ09
        Length = 659

 Score = 852 (305.0 bits), Expect = 8.0e-100, Sum P(3) = 8.0e-100
 Identities = 161/322 (50%), Positives = 221/322 (68%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PR+  R  D+F    ++L + PEVTE   V +A VPV+K  F G+ 
Sbjct:   115 VHHKGADIDALCVAPRNIERT-DYFQSFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIE 173

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDLL+ARLSL  IP+D D+  D++L+N D ++VRSLNGCRVTD+IL LVP I+NFR  LR
Sbjct:   174 IDLLFARLSLKEIPDDFDLRDDNLLRNLDHRSVRSLNGCRVTDEILALVPNIENFRLALR 233

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK+ G+YSN  G+ GG+ WA+LVAR CQLYPNA  + LV +FF V+++W+WPNPV
Sbjct:   234 TIKLWAKKHGIYSNSLGYFGGVTWAMLVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPV 293

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   +  +L  QVWDPR N  D+YHLMPIITPAYP  NS++NVS ST ++++ EF RG 
Sbjct:   294 LLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTFNVSESTKKVILTEFNRGM 353

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +      + W+ LFE  +FF  Y++++ + ++++ ADD   W G VES++R L  
Sbjct:   354 NITDEIMLGR--IPWERLFEAPSFFYRYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIS 411

Query:   360 KIERHTYNMLQCHPHPGDFSDK 381
              +ER+ +  L  H +P  F  K
Sbjct:   412 NLERNPHIAL-AHVNPKCFEFK 432

 Score = 110 (43.8 bits), Expect = 8.0e-100, Sum P(3) = 8.0e-100
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query:     2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
             G    ++LG+T  ISLA P  +DL RT +L   L   N++ESQ+E   R E+L +L+
Sbjct:    21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLN 77

 Score = 62 (26.9 bits), Expect = 8.0e-100, Sum P(3) = 8.0e-100
 Identities = 22/81 (27%), Positives = 40/81 (49%)

Query:   382 SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAH 436
             S P +CS +F+GL+ ++     E    D+  +++ F + V M+ +     K GM I   H
Sbjct:   462 SAP-FCSMWFIGLEFERS----ENLNVDLTESIQNFTEHVMMHGVNIKMLKEGMTIDARH 516

Query:   437 VTRRNLPNFVFPGGVRPSRPS 457
             V R+ L  ++    ++  R S
Sbjct:   517 VKRKQLSLYLDSDFLKRERKS 537


>UNIPROTKB|A5D7N5 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
            EMBL:DAAA02031008 EMBL:DAAA02031009 EMBL:BC140625 IPI:IPI00695296
            RefSeq:NP_001091535.1 UniGene:Bt.24299 SMR:A5D7N5
            Ensembl:ENSBTAT00000009749 GeneID:529071 KEGG:bta:529071
            InParanoid:A5D7N5 NextBio:20874959 Uniprot:A5D7N5
        Length = 740

 Score = 915 (327.2 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
 Identities = 191/456 (41%), Positives = 275/456 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     +  L  V DA VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL++  I E+LD+  DS L++ D + +RSLNGCRVTD+IL LVP  + FR TLR
Sbjct:   165 IDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV
Sbjct:   225 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVSTST  +M++EF++G 
Sbjct:   285 LLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G VES++R L  
Sbjct:   345 AVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E    D+   ++ 
Sbjct:   403 NLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQS 461

Query:   416 FKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKV 471
             F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   D  R+     
Sbjct:   462 FTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVTRSSSGPQ 520

Query:   472 SSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 507
             S  +   ++     + TD+  +T   N+   A  PS
Sbjct:   521 SKRSSLDSNCLDSSRDTDN--ETPF-NSPVSANKPS 553

 Score = 91 (37.1 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL   ++   ++E +EE   R  VLG+L+ +
Sbjct:    20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 70


>UNIPROTKB|F1NKG9 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
            evidence=IBA] [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
            GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:AADN02003685
            IPI:IPI00820771 RefSeq:NP_001185530.1 UniGene:Gga.4316
            Ensembl:ENSGALT00000037556 GeneID:395878 KEGG:gga:395878
            NextBio:20815945 ArrayExpress:F1NKG9 Uniprot:F1NKG9
        Length = 737

 Score = 902 (322.6 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
 Identities = 188/400 (47%), Positives = 250/400 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   ++ L +  EV +L  V +A VPV+K  F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   165 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   225 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   285 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   345 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 402

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKPLYCSY----FMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P    Y     +GL  K+     E    D+   ++
Sbjct:   403 NLEKNEFITL-AHVNPQSFPAPKENPDKEEYRTMWVIGLVFKK-TENSENLSVDLTYDIQ 460

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 446
              F   V    +        M+I+  HV R+ L    PN V
Sbjct:   461 SFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLLPNHV 500

 Score = 103 (41.3 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D M T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNL 70


>MGI|MGI:1932115 [details] [associations]
            symbol:Papolb "poly (A) polymerase beta (testis specific)"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=ISS;ISA;IBA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783 "endoplasmic
            reticulum" evidence=IPI] [GO:0006369 "termination of RNA polymerase
            II transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008152 "metabolic process" evidence=ISS] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
            3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 MGI:MGI:1932115 GO:GO:0005783
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0006397 GO:GO:0006378 GO:GO:0006351 GO:GO:0003723
            GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 GO:GO:0043631 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            HOVERGEN:HBG053502 CTD:56903 OMA:FPGGVAW OrthoDB:EOG4THVSN
            EMBL:AF039957 EMBL:AB030729 IPI:IPI00230087 RefSeq:NP_064327.1
            UniGene:Mm.441372 ProteinModelPortal:Q9WVP6 SMR:Q9WVP6
            MINT:MINT-6167909 STRING:Q9WVP6 PhosphoSite:Q9WVP6 PaxDb:Q9WVP6
            PRIDE:Q9WVP6 GeneID:56522 KEGG:mmu:56522 InParanoid:Q9WVP6
            NextBio:312850 Bgee:Q9WVP6 CleanEx:MM_PAPOLB Genevestigator:Q9WVP6
            Uniprot:Q9WVP6
        Length = 641

 Score = 885 (316.6 bits), Expect = 3.4e-99, Sum P(3) = 3.4e-99
 Identities = 186/400 (46%), Positives = 254/400 (63%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I +FR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK   +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I   +  N+A+  W  LFE  +FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITHEILLNKAE--WSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQ---GVPVGEGEQFDIR- 410
              +E++ +  L     Q  P P + +DK +     + +GL  K+      +     +DI+ 
Sbjct:   404 SLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWVIGLVLKKPENSEILSIDLTYDIQS 462

Query:   411 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL----PNFV 446
              T   ++QA++   + +  M+I+  H+ R+ L    PN V
Sbjct:   463 FTDTVYRQAINS-KMFEMDMKIAAMHLRRKELHQLLPNHV 501

 Score = 90 (36.7 bits), Expect = 3.4e-99, Sum P(3) = 3.4e-99
 Identities = 20/54 (37%), Positives = 33/54 (61%)

Query:     7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             ++ GI+ PISLA P D D   T+KL + L+   ++E +EE   R  +L +L+ +
Sbjct:    18 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNL 71

 Score = 43 (20.2 bits), Expect = 3.4e-99, Sum P(3) = 3.4e-99
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query:   548 ENNLTDSIRGSRNSVEVSSHNGKVD-GPMIGDPRNK 582
             +++L  SI  S NS+   S  G +  GP+ G+P+ +
Sbjct:   520 DSSLLLSI-DSENSMTAPSPTGTMKTGPLTGNPQGR 554


>UNIPROTKB|F1SQL7 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 CTD:64895 OMA:IDGSSKR EMBL:CU467691
            RefSeq:XP_003125156.1 UniGene:Ssc.62549 Ensembl:ENSSSCT00000009186
            GeneID:100523547 KEGG:ssc:100523547 Uniprot:F1SQL7
        Length = 741

 Score = 911 (325.7 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
 Identities = 189/456 (41%), Positives = 273/456 (59%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     +  L  V DA VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL++  I ++LD+  DS L++ D + +RSLNGCRVTD+IL LVP  + FR TLR
Sbjct:   165 IDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV
Sbjct:   225 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVSTST  +M++EF++G 
Sbjct:   285 LLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G VES++R L  
Sbjct:   345 AVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E    D+   ++ 
Sbjct:   403 NLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQS 461

Query:   416 FKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKV 471
             F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   D  R+     
Sbjct:   462 FTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVTRSSSGPQ 520

Query:   472 SSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 507
             S  +   ++     + TD+       N+   A  PS
Sbjct:   521 SKRSSLDSNCLDSSRDTDNGTPF---NSPVSANKPS 553

 Score = 91 (37.1 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL   ++   ++E +EE   R  VLG+L+ +
Sbjct:    20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 70


>MGI|MGI:2442119 [details] [associations]
            symbol:Papolg "poly(A) polymerase gamma" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
            [GO:0006378 "mRNA polyadenylation" evidence=IBA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
            evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
            [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            MGI:MGI:2442119 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 CTD:64895 OMA:IDGSSKR OrthoDB:EOG4R23T8
            EMBL:DQ103505 EMBL:AK035810 EMBL:AL662810 EMBL:BC059271
            IPI:IPI00317437 RefSeq:NP_766143.2 UniGene:Mm.470599 HSSP:P25500
            ProteinModelPortal:Q6PCL9 SMR:Q6PCL9 PhosphoSite:Q6PCL9
            PaxDb:Q6PCL9 PRIDE:Q6PCL9 Ensembl:ENSMUST00000020513 GeneID:216578
            KEGG:mmu:216578 UCSC:uc007ifp.2 InParanoid:Q6PCL9 NextBio:375224
            Bgee:Q6PCL9 CleanEx:MM_PAPOLG Genevestigator:Q6PCL9
            GermOnline:ENSMUSG00000020273 Uniprot:Q6PCL9
        Length = 739

 Score = 910 (325.4 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
 Identities = 195/460 (42%), Positives = 275/460 (59%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     +  L  V DA VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL++  I ++LD+  DS L++ D + +RSLNGCRVTD+IL LVP  + FR TLR
Sbjct:   165 IDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV
Sbjct:   225 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVSTST  +M++EF++G 
Sbjct:   285 LLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G VES++R L  
Sbjct:   345 AVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E    D+   ++ 
Sbjct:   403 NLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLGIIFRR-VENAESVNIDLTYDIQS 461

Query:   416 FKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA---LE 468
             F   V    +   + K GM+I   HV ++ L +++ P  +   +  K   D  R+   L+
Sbjct:   462 FTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL-PAEILQKK-KKSLSDVSRSSGGLQ 519

Query:   469 RKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 508
              K SS      D  R    TD        N+   A  PS+
Sbjct:   520 SKRSSLDSTCLDSSR---DTDSGTPF---NSPVSANKPSN 553

 Score = 91 (37.1 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL   ++   ++E +EE   R  VLG+L+ +
Sbjct:    20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 70


>MGI|MGI:109301 [details] [associations]
            symbol:Papola "poly (A) polymerase alpha" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
            [GO:0005737 "cytoplasm" evidence=IBA] [GO:0006369 "termination of
            RNA polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            MGI:MGI:109301 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000287 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
            GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376 eggNOG:COG5186
            Gene3D:3.30.70.590 SUPFAM:SSF55003 CTD:10914
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 OMA:SPVTTQG OrthoDB:EOG4J6RQB ChiTaRS:PAPOLA
            EMBL:U52197 EMBL:U58134 EMBL:U58135 EMBL:AB086650 IPI:IPI00224655
            IPI:IPI00224656 IPI:IPI00266738 IPI:IPI00467146 RefSeq:NP_035242.1
            UniGene:Mm.255877 ProteinModelPortal:Q61183 SMR:Q61183
            STRING:Q61183 PhosphoSite:Q61183 PaxDb:Q61183 PRIDE:Q61183
            DNASU:18789 Ensembl:ENSMUST00000021535 Ensembl:ENSMUST00000109901
            Ensembl:ENSMUST00000166735 GeneID:18789 KEGG:mmu:18789
            UCSC:uc007oyv.1 UCSC:uc007oyx.1 InParanoid:Q61183 NextBio:295064
            Bgee:Q61183 CleanEx:MM_PAPOLA Genevestigator:Q61183
            GermOnline:ENSMUSG00000021111 Uniprot:Q61183
        Length = 739

 Score = 899 (321.5 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
 Identities = 188/410 (45%), Positives = 250/410 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   404 SLEKNEFITL-AHVNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 461

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
              F   V    +        M+I+  HV R+ L   + P  V   R    T
Sbjct:   462 SFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 510

 Score = 102 (41.0 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 71


>UNIPROTKB|G3MYA2 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
            taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 EMBL:DAAA02053163
            Ensembl:ENSBTAT00000063150 Uniprot:G3MYA2
        Length = 718

 Score = 896 (320.5 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
 Identities = 187/410 (45%), Positives = 250/410 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   404 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 461

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
              F   V    +        M+I+  HV R+ L   + P  V   +    T
Sbjct:   462 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-PSHVLQKKKKHST 510

 Score = 103 (41.3 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNL 71


>UNIPROTKB|P25500 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
            taurus" [GO:0005524 "ATP binding" evidence=IDA] [GO:0000287
            "magnesium ion binding" evidence=IDA] [GO:0030145 "manganese ion
            binding" evidence=IDA] [GO:0043631 "RNA polyadenylation"
            evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
            activity" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000287 GO:GO:0006378 GO:GO:0003723
            GO:GO:0030145 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003 EMBL:X61585
            EMBL:X63436 IPI:IPI00686724 IPI:IPI00699231 PIR:S17875 PIR:S17925
            PIR:S18642 RefSeq:NP_788820.1 UniGene:Bt.109586 PDB:1F5A PDB:1Q78
            PDB:1Q79 PDBsum:1F5A PDBsum:1Q78 PDBsum:1Q79
            ProteinModelPortal:P25500 SMR:P25500 STRING:P25500
            Ensembl:ENSBTAT00000005300 GeneID:338051 KEGG:bta:338051 CTD:10914
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 InParanoid:P25500 OMA:SPVTTQG
            EvolutionaryTrace:P25500 NextBio:20812502 ArrayExpress:P25500
            Uniprot:P25500
        Length = 739

 Score = 896 (320.5 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
 Identities = 187/410 (45%), Positives = 250/410 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   404 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 461

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
              F   V    +        M+I+  HV R+ L   + P  V   +    T
Sbjct:   462 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-PSHVLQKKKKHST 510

 Score = 103 (41.3 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNL 71


>UNIPROTKB|Q3T0A2 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9913 "Bos
            taurus" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003 UniGene:Bt.109586
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HOVERGEN:HBG053502 OrthoDB:EOG4J6RQB EMBL:DAAA02053163
            EMBL:BC102481 IPI:IPI00705304 SMR:Q3T0A2 STRING:Q3T0A2
            Ensembl:ENSBTAT00000021001 Uniprot:Q3T0A2
        Length = 693

 Score = 896 (320.5 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
 Identities = 187/410 (45%), Positives = 250/410 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   404 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 461

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
              F   V    +        M+I+  HV R+ L   + P  V   +    T
Sbjct:   462 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-PSHVLQKKKKHST 510

 Score = 103 (41.3 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNL 71


>UNIPROTKB|F1PDS0 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
            "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IBA] [GO:0003723 "RNA binding"
            evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006378 GO:GO:0003723
            GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 OMA:SPVTTQG
            EMBL:AAEX03005970 EMBL:AAEX03005971 Ensembl:ENSCAFT00000028221
            Uniprot:F1PDS0
        Length = 745

 Score = 896 (320.5 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
 Identities = 187/400 (46%), Positives = 248/400 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   113 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 171

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   172 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 231

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   232 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 291

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   292 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 351

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   352 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 409

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   410 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 467

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 446
              F   V    +        M+I+  HV R+ L    PN V
Sbjct:   468 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 507

 Score = 102 (41.0 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    27 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 77


>UNIPROTKB|F1SAQ7 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 EMBL:CT827800
            Ensembl:ENSSSCT00000002783 Uniprot:F1SAQ7
        Length = 693

 Score = 896 (320.5 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
 Identities = 187/400 (46%), Positives = 248/400 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   404 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 461

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 446
              F   V    +        M+I+  HV R+ L    PN V
Sbjct:   462 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 501

 Score = 102 (41.0 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 71


>UNIPROTKB|I3L6F0 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 OMA:SPVTTQG EMBL:CT827800
            Ensembl:ENSSSCT00000027948 Uniprot:I3L6F0
        Length = 734

 Score = 896 (320.5 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
 Identities = 187/400 (46%), Positives = 248/400 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   123 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 181

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   182 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 241

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   242 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 301

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   302 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 361

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   362 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 419

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   420 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 477

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 446
              F   V    +        M+I+  HV R+ L    PN V
Sbjct:   478 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 517

 Score = 102 (41.0 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    37 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 87


>UNIPROTKB|G3XAH6 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 EMBL:AL163051
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
            ProteinModelPortal:G3XAH6 SMR:G3XAH6 Ensembl:ENST00000392990
            ArrayExpress:G3XAH6 Bgee:G3XAH6 Uniprot:G3XAH6
        Length = 724

 Score = 896 (320.5 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
 Identities = 187/400 (46%), Positives = 248/400 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   404 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 461

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 446
              F   V    +        M+I+  HV R+ L    PN V
Sbjct:   462 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 501

 Score = 101 (40.6 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 71


>UNIPROTKB|P51003 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=IDA;TAS]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378 "mRNA
            polyadenylation" evidence=NAS] [GO:0003723 "RNA binding"
            evidence=NAS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
            [GO:0000287 "magnesium ion binding" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=ISS] [GO:0030145 "manganese ion binding"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=TAS]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
            [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0031124 "mRNA 3'-end processing"
            evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
            Reactome:REACT_71 InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005524 GO:GO:0005737 GO:GO:0005654 GO:GO:0000287
            Reactome:REACT_1675 GO:GO:0006378 GO:GO:0003723 GO:GO:0030145
            GO:GO:0000398 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0004652
            Reactome:REACT_78 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 CTD:10914 HOVERGEN:HBG053502 OMA:SPVTTQG
            EMBL:BC000927 EMBL:BC036014 EMBL:BX248301 EMBL:BX248753
            EMBL:BX161482 EMBL:X76770 IPI:IPI00384028 IPI:IPI01025082
            RefSeq:NP_001238935.1 RefSeq:NP_001238936.1 RefSeq:NP_116021.2
            UniGene:Hs.253726 ProteinModelPortal:P51003 SMR:P51003
            DIP:DIP-27610N IntAct:P51003 MINT:MINT-125699 STRING:P51003
            PhosphoSite:P51003 DMDM:59803092 PaxDb:P51003 PeptideAtlas:P51003
            PRIDE:P51003 Ensembl:ENST00000216277 Ensembl:ENST00000557320
            Ensembl:ENST00000557471 GeneID:10914 KEGG:hsa:10914 UCSC:uc001yfo.3
            UCSC:uc001yfq.3 GeneCards:GC14P096969 HGNC:HGNC:14981 HPA:HPA001788
            MIM:605553 neXtProt:NX_P51003 PharmGKB:PA32932 InParanoid:P51003
            OrthoDB:EOG4J6RQB PhylomeDB:P51003 ChiTaRS:PAPOLA GenomeRNAi:10914
            NextBio:41453 ArrayExpress:P51003 Bgee:P51003 CleanEx:HS_PAPOLA
            Genevestigator:P51003 GermOnline:ENSG00000090060 Uniprot:P51003
        Length = 745

 Score = 896 (320.5 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
 Identities = 187/400 (46%), Positives = 248/400 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   286 LLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGL 345

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I + +  ++A+  W  LFE   FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   346 AITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVG 403

Query:   360 KIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
              +E++ +  L  H +P  F + K  P        + +GL  K+     E    D+   ++
Sbjct:   404 SLEKNEFITL-AHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQ 461

Query:   415 EFKQAVSMYTLRKP----GMQISVAHVTRRNL----PNFV 446
              F   V    +        M+I+  HV R+ L    PN V
Sbjct:   462 SFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHV 501

 Score = 101 (40.6 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 71


>UNIPROTKB|J9NS30 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 OMA:IDGSSKR EMBL:AAEX03007549
            Ensembl:ENSCAFT00000044895 Uniprot:J9NS30
        Length = 813

 Score = 904 (323.3 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
 Identities = 181/415 (43%), Positives = 260/415 (62%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     +  L  V DA VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL++  I ++LD+  DS L++ D + +RSLNGCRVT++IL LVP  + FR TLR
Sbjct:   165 IDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTNEILHLVPNKETFRLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA  S LV +FF V+++W WPNPV
Sbjct:   225 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVSTST  +M++EF++G 
Sbjct:   285 LLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G VES++R L  
Sbjct:   345 AVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E    D+   ++ 
Sbjct:   403 NLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQS 461

Query:   416 FKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 466
             F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   D  R+
Sbjct:   462 FTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLSDVSRS 515

 Score = 91 (37.1 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL   ++   ++E +EE   R  VLG+L+ +
Sbjct:    20 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 70


>UNIPROTKB|I3LRR6 [details] [associations]
            symbol:PAPOLB "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005783 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 OMA:FPGGVAW EMBL:CU928347
            Ensembl:ENSSSCT00000031977 Uniprot:I3LRR6
        Length = 636

 Score = 900 (321.9 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
 Identities = 197/444 (44%), Positives = 277/444 (62%)

Query:    31 LEKYLRDVNLYESQEEAVSREEVLGRLDQ-------VHGPGADIDTLCVGPRHATREEDF 83
             +++++R+++  +S  +AV  E V G++         VH  GADID LCV PRH  R  DF
Sbjct:    86 VKEWIRELSESKSLPQAVI-ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DF 143

Query:    84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
             F   +  L    EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+
Sbjct:   144 FTSFYDKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 203

Query:   144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
             L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAK   +YSN+ GFLGG++W
Sbjct:   204 LKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSW 263

Query:   204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
             A+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+
Sbjct:   264 AMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDR 323

Query:   264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
             YHLMPIITPAYP  NS+YNVS ST  +M++EF++G  I   +  ++A+  W  LFE  +F
Sbjct:   324 YHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAE--WSKLFEAPSF 381

Query:   324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDF 378
             F+ YK+Y+ +  SA        W G VES++R L   +E++ +  L     Q  P P + 
Sbjct:   382 FQKYKHYIALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRES 441

Query:   379 SDKSKPLYCSYFMGL--QRKQGVPVGEGE-QFDIR-LTVKEFKQAVSMYTLRKPGMQISV 434
              DK +     + +GL  +R +   +   +  +DI+  T   ++QAV+   + +  M+I+ 
Sbjct:   442 PDKEE-FRTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNS-KMFEMDMKIAA 499

Query:   435 AHVTRRNL----PNFVFPGGVRPS 454
              H+ R+ L    PN V P    PS
Sbjct:   500 MHLRRKELHQLLPNHVLPQKKTPS 523

 Score = 91 (37.1 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
 Identities = 20/52 (38%), Positives = 33/52 (63%)

Query:     7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
             +R GI+ PISLA P + D + T+KL + L+   ++E +EE   R  +L +L+
Sbjct:    32 KRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLN 83


>UNIPROTKB|Q9NRJ5 [details] [associations]
            symbol:PAPOLB "Poly(A) polymerase beta" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IBA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
            "cytoplasm" evidence=IBA] [GO:0006369 "termination of RNA
            polymerase II transcription" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0046872 GO:GO:0006378 GO:GO:0003723
            EMBL:AC092610 GO:GO:0000398 GO:GO:0006369 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            HOVERGEN:HBG053502 EMBL:AF218840 EMBL:BC036653 IPI:IPI00024525
            RefSeq:NP_064529.4 UniGene:Hs.487409 ProteinModelPortal:Q9NRJ5
            SMR:Q9NRJ5 STRING:Q9NRJ5 PhosphoSite:Q9NRJ5 DMDM:18203318
            PaxDb:Q9NRJ5 PRIDE:Q9NRJ5 DNASU:56903 Ensembl:ENST00000404991
            GeneID:56903 KEGG:hsa:56903 CTD:56903 GeneCards:GC07M004897
            HGNC:HGNC:15970 MIM:607436 neXtProt:NX_Q9NRJ5 PharmGKB:PA32933
            InParanoid:Q9NRJ5 OMA:FPGGVAW OrthoDB:EOG4THVSN GenomeRNAi:56903
            NextBio:62363 ArrayExpress:Q9NRJ5 Bgee:Q9NRJ5 CleanEx:HS_PAPOLB
            Genevestigator:Q9NRJ5 Uniprot:Q9NRJ5
        Length = 636

 Score = 890 (318.4 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
 Identities = 197/459 (42%), Positives = 282/459 (61%)

Query:    31 LEKYLRDVNLYESQEEAVSREEVLGRLDQ-------VHGPGADIDTLCVGPRHATREEDF 83
             +++++R+++  +S  ++V  E V G++         VH  GADID LCV P H  R  DF
Sbjct:    72 VKEWIREISESKSLPQSVI-ENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DF 129

Query:    84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
             F   +  L    EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IPEDLD+  DS+
Sbjct:   130 FTSFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSL 189

Query:   144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
             L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAK   +YSN+ GFLGG++W
Sbjct:   190 LKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSW 249

Query:   204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
             A+LVAR CQLYPNAV S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+
Sbjct:   250 AMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDR 309

Query:   264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
             YHLMPIITPAYP  NS+YNVS ST  +M++EF++G  I   +  ++A+  W  LFE  +F
Sbjct:   310 YHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAE--WSKLFEAPSF 367

Query:   324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKS 382
             F+ YK+Y+ +  SA        W G VES++R L   +E++ +  L  H +P  F + K 
Sbjct:   368 FQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKE 426

Query:   383 KPLYCSYF------MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVSMYTLRKPGMQISV 434
              P    +       +GL++     +   +  +DI+  T   ++QAV+   + + GM+I+ 
Sbjct:   427 NPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNS-KMFEMGMKITA 485

Query:   435 AHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSS 473
              H+ R+ L   + P  V   + +  T + RR  +   SS
Sbjct:   486 MHLRRKELHQLL-PHHVLQDKKAHST-EGRRLTDLNDSS 522

 Score = 91 (37.1 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query:     8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             R G++ PISLA P + D + T++L + LR   ++E +EE   R  VL +L+ +
Sbjct:    19 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNL 71


>RGD|1310946 [details] [associations]
            symbol:Papolb "poly (A) polymerase beta (testis specific)"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
            "endoplasmic reticulum" evidence=ISO] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1310946 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 EMBL:CH474012 GO:GO:0004652 GO:GO:0043631 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOVERGEN:HBG053502 CTD:56903
            EMBL:BC079046 IPI:IPI00363752 RefSeq:NP_001012020.1
            UniGene:Rn.210888 SMR:Q6AYH1 GeneID:304300 KEGG:rno:304300
            UCSC:RGD:1310946 NextBio:652828 Genevestigator:Q6AYH1
            Uniprot:Q6AYH1
        Length = 642

 Score = 881 (315.2 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
 Identities = 186/400 (46%), Positives = 253/400 (63%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   108 VHTKGADIDALCVAPRHVDRN-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 166

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I +FR TLR
Sbjct:   167 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLR 226

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK   +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   227 AIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPV 286

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G 
Sbjct:   287 LLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGL 346

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              I   +  N+A+  W  LFE  +FF+ YK+Y+ +  SA        W G VES++R L  
Sbjct:   347 AITHEILLNKAE--WSKLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVG 404

Query:   360 KIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQ---GVPVGEGEQFDIR- 410
              +E++ +  L     Q  P P +  DK +     + +GL  K+      +     +DI+ 
Sbjct:   405 SLEKNEFITLAHVNPQSFPAPKENVDKEE-FRTMWVIGLVLKKPENSEILSIDLTYDIQS 463

Query:   411 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL----PNFV 446
              T   ++QA++   + +  M+I+  H+ R+ L    PN V
Sbjct:   464 FTDTVYRQAINS-KMFEMDMKIAAMHLRRKELHQLLPNHV 502

 Score = 89 (36.4 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
 Identities = 20/54 (37%), Positives = 33/54 (61%)

Query:     7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             ++ GI+ PISLA P D D   T+KL + L+   ++E +EE   R  +L +L+ +
Sbjct:    19 KQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNL 72


>UNIPROTKB|F1NL95 [details] [associations]
            symbol:F1NL95 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008811
            "chloramphenicol O-acetyltransferase activity" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=IBA] InterPro:IPR001707
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00600779
            Ensembl:ENSGALT00000012751 OMA:RYHVMPI Uniprot:F1NL95
        Length = 748

 Score = 870 (311.3 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
 Identities = 168/365 (46%), Positives = 239/365 (65%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L    E+  L  V DA+VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL +  + ++LD+  DS L++ D + +RSLNGCRVTD+IL LVP  +NF+ TLR
Sbjct:   165 IDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL+PNA+ S LV +FF ++++W WPNPV
Sbjct:   225 AIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNALASTLVHKFFLIFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YH+MPIITPAYP  NS+YNVSTST  ++++E + G 
Sbjct:   285 LLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              +   + +  +D  W  LFE   FF+ YK+Y+ +  S    +    W G VES++R L  
Sbjct:   345 AVTNEILQGRSD--WPKLFEQPNFFQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ + N+   +P   PG+     +  Y S +F+G+  ++ +   E  + D+   ++ 
Sbjct:   403 NLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRK-LESAESTKIDLTYDIQS 461

Query:   416 FKQAV 420
             F  AV
Sbjct:   462 FTDAV 466

 Score = 93 (37.8 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
 Identities = 21/51 (41%), Positives = 31/51 (60%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P D D + T+KL + +    ++E +EE   R  VL +L+ +
Sbjct:    20 GITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNL 70


>UNIPROTKB|F1P3A1 [details] [associations]
            symbol:F1P3A1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008811 "chloramphenicol
            O-acetyltransferase activity" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR001707
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 ProDom:PD002660 GO:GO:0005634
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            GO:GO:0008811 EMBL:AADN02046885 EMBL:AADN02046884 IPI:IPI00820385
            Ensembl:ENSGALT00000040310 Uniprot:F1P3A1
        Length = 738

 Score = 870 (311.3 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
 Identities = 168/365 (46%), Positives = 239/365 (65%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L    E+  L  V DA+VPV+KF+F G+ 
Sbjct:   106 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQEEIKNLRAVEDAYVPVVKFEFDGIE 164

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL +  + ++LD+  DS L++ D + +RSLNGCRVTD+IL LVP  +NF+ TLR
Sbjct:   165 IDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKENFQLTLR 224

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL+PNA+ S LV +FF ++++W WPNPV
Sbjct:   225 AIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLHPNALASTLVHKFFLIFSKWEWPNPV 284

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL   EE +L L VWDPR NP D+YH+MPIITPAYP  NS+YNVSTST  ++++E + G 
Sbjct:   285 LLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSTSTRAVVVEELKHGL 344

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              +   + +  +D  W  LFE   FF+ YK+Y+ +  S    +    W G VES++R L  
Sbjct:   345 AVTNEILQGRSD--WPKLFEQPNFFQKYKHYIVLTASTYTEEHHLEWVGLVESKIRVLVG 402

Query:   360 KIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKE 415
              +ER+ + N+   +P   PG+     +  Y S +F+G+  ++ +   E  + D+   ++ 
Sbjct:   403 NLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRK-LESAESTKIDLTYDIQS 461

Query:   416 FKQAV 420
             F  AV
Sbjct:   462 FTDAV 466

 Score = 93 (37.8 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
 Identities = 21/51 (41%), Positives = 31/51 (60%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P D D + T+KL + +    ++E +EE   R  VL +L+ +
Sbjct:    20 GITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNL 70


>WB|WBGene00009658 [details] [associations]
            symbol:F43G6.5 species:6239 "Caenorhabditis elegans"
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            OMA:FPGGVAW HSSP:P25500 EMBL:Z50070 EMBL:AL032651 PIR:C88325
            PIR:T22140 RefSeq:NP_496524.1 ProteinModelPortal:G5EBX5 SMR:G5EBX5
            EnsemblMetazoa:F43G6.5 GeneID:174816 KEGG:cel:CELE_F43G6.5
            CTD:174816 WormBase:F43G6.5 NextBio:885628 Uniprot:G5EBX5
        Length = 554

 Score = 848 (303.6 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
 Identities = 183/455 (40%), Positives = 273/455 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADIDTL + PRHATR  DFF    QML + PEVT L  V +A VP+M  K+SG+ 
Sbjct:   105 VHSSGADIDTLVLAPRHATRA-DFFSSFKQMLAKDPEVTNLCAVENAFVPIMTMKYSGIE 163

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID L+ARL+L  +PEDLDI  D++L+N D+++VRSLNGCRV + +L+LVP  +NF  TLR
Sbjct:   164 IDFLFARLALKEVPEDLDILDDALLKNLDQESVRSLNGCRVAENLLKLVPNQENFCITLR 223

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK  G+YSN  GF GGI WA+LVAR CQLYPNA PS L+ + F +++ W+WP PV
Sbjct:   224 AIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSKLIQKVFFIFSTWKWPAPV 283

Query:   240 LLCAIEEGSLGLQ-----VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
             LL  I    + L      VWDPRRN  D+YHLMPI+TPA+P  NS++NVS S+++++ +E
Sbjct:   284 LLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTPAFPQQNSTHNVSRSSMKVIQEE 343

Query:   295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
              +     C+ ++    +  W  L E   FF  YK+++ + ++AE   D   + G+ ESR+
Sbjct:   344 MKDALITCDNIQNGSCN--WMDLLEEINFFSRYKHFISLSMTAETEKDELAFGGFFESRI 401

Query:   355 RQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
             RQL L +E++    L  H +P  F     P    +F+GLQ  + V     +  D+   ++
Sbjct:   402 RQLVLILEKNQGIKL-AHINPKKFKAAKDPKKSVWFIGLQFDENV-----KNLDLTKDIQ 455

Query:   415 EFK-----QAVSMYTLRKP-GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL- 467
             +FK     QA S+  +     ++   ++V R +L   +    ++  +  K   +S+  + 
Sbjct:   456 QFKRNIDYQAKSVKDIEANCAVETDFSYVKRSDLAQTISVKDLKQGKMYKKP-ESKDPVS 514

Query:   468 -ERKVSSHTKPGADDGRKRKQTD-DNVDTHLRNAK 500
              +RKVS +  P     +K   ++  +V++ L+N K
Sbjct:   515 KKRKVSENA-PSVPKKQKLDVSEKSSVESLLKNLK 548

 Score = 97 (39.2 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
 Identities = 22/49 (44%), Positives = 29/49 (59%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
             G+++PIS A P   DL  T  L+K L   N YE QEE   R +VL +L+
Sbjct:    20 GVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLN 68


>WB|WBGene00011791 [details] [associations]
            symbol:T15H9.6 species:6239 "Caenorhabditis elegans"
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
            PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
            STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
            KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
            InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
        Length = 554

 Score = 839 (300.4 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
 Identities = 181/444 (40%), Positives = 262/444 (59%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID++ V PRH TR  DFF     +L + PEVTEL  V  A VP+M  K+SGV 
Sbjct:   100 VHSSGADIDSIVVAPRHITRS-DFFNSFKDILAKNPEVTELCAVEKAFVPIMTLKYSGVD 158

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  +PEDL+I  DS+L+N DE++VRSLNGCRV +Q+L+LVP  +NF  TLR
Sbjct:   159 IDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLR 218

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK  G+YSN  GF GGI WA+LVARICQLYPNA PS L+ + F +++ W WP PV
Sbjct:   219 AIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPV 278

Query:   240 LL----C-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
             LL    C   +   L   VWDPRRN  D+YHLMPIITPA+P  NS++NVS S+++++ DE
Sbjct:   279 LLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDE 338

Query:   295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
              ++   IC+ +  +E  ++W  L E   FF  Y +++ + + AE+  +   + G+ ESR+
Sbjct:   339 MKKALIICDKI--HEGTLEWRDLLEEINFFSKYHHFIALKLKAESVKEELAFGGFFESRI 396

Query:   355 RQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 413
             RQL   +E++   ++Q    +P  F D   P    +F+GL+    V     +  D+   +
Sbjct:   397 RQLVQILEKN--QVIQVAQINPRKFKDVKDPKKSIWFIGLEFVANV-----KNVDLTSDI 449

Query:   414 KEFKQAVSMYTLR----KPGMQISV--AHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 467
             ++FK  +   ++       G Q+     +  R NL N +    +   R  K T  S    
Sbjct:   450 QQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSNLINIISKKDLSCQRIMKKTEVSVPVT 509

Query:   468 E--RKVSSHTKPGADDGRKRKQTD 489
             +  R +  H    A   +K+ + D
Sbjct:   510 KDSRNLKRHILDEAPTVQKKHKLD 533

 Score = 85 (35.0 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
             G+++PIS A P  +D+  T  L+  L +   +ES++E + R +VL  LD
Sbjct:    15 GVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLD 63


>UNIPROTKB|Q09995 [details] [associations]
            symbol:T15H9.6 "Protein T15H9.6" species:6239
            "Caenorhabditis elegans" [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 EMBL:Z47356 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
            PIR:T24943 RefSeq:NP_496067.1 ProteinModelPortal:Q09995 SMR:Q09995
            STRING:Q09995 EnsemblMetazoa:T15H9.6 GeneID:174513
            KEGG:cel:CELE_T15H9.6 UCSC:T15H9.6 CTD:174513 WormBase:T15H9.6
            InParanoid:Q09995 OMA:PFGSYRL NextBio:884348 Uniprot:Q09995
        Length = 554

 Score = 839 (300.4 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
 Identities = 181/444 (40%), Positives = 262/444 (59%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID++ V PRH TR  DFF     +L + PEVTEL  V  A VP+M  K+SGV 
Sbjct:   100 VHSSGADIDSIVVAPRHITRS-DFFNSFKDILAKNPEVTELCAVEKAFVPIMTLKYSGVD 158

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  +PEDL+I  DS+L+N DE++VRSLNGCRV +Q+L+LVP  +NF  TLR
Sbjct:   159 IDILFARLALKSVPEDLNILDDSLLKNLDEESVRSLNGCRVAEQLLKLVPHQKNFCITLR 218

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK  G+YSN  GF GGI WA+LVARICQLYPNA PS L+ + F +++ W WP PV
Sbjct:   219 AIKLWAKNHGIYSNSMGFFGGITWAILVARICQLYPNAAPSRLIQKVFFIFSTWNWPAPV 278

Query:   240 LL----C-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
             LL    C   +   L   VWDPRRN  D+YHLMPIITPA+P  NS++NVS S+++++ DE
Sbjct:   279 LLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDE 338

Query:   295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
              ++   IC+ +  +E  ++W  L E   FF  Y +++ + + AE+  +   + G+ ESR+
Sbjct:   339 MKKALIICDKI--HEGTLEWRDLLEEINFFSKYHHFIALKLKAESVKEELAFGGFFESRI 396

Query:   355 RQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 413
             RQL   +E++   ++Q    +P  F D   P    +F+GL+    V     +  D+   +
Sbjct:   397 RQLVQILEKN--QVIQVAQINPRKFKDVKDPKKSIWFIGLEFVANV-----KNVDLTSDI 449

Query:   414 KEFKQAVSMYTLR----KPGMQISV--AHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 467
             ++FK  +   ++       G Q+     +  R NL N +    +   R  K T  S    
Sbjct:   450 QQFKMNIDRQSMSVKEIAAGCQVETDFTYEKRSNLINIISKKDLSCQRIMKKTEVSVPVT 509

Query:   468 E--RKVSSHTKPGADDGRKRKQTD 489
             +  R +  H    A   +K+ + D
Sbjct:   510 KDSRNLKRHILDEAPTVQKKHKLD 533

 Score = 85 (35.0 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
             G+++PIS A P  +D+  T  L+  L +   +ES++E + R +VL  LD
Sbjct:    15 GVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLD 63


>POMBASE|SPBC646.04 [details] [associations]
            symbol:pla1 "poly(A) polymerase Pla1" species:4896
            "Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IGI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005847 "mRNA cleavage and polyadenylation specificity factor
            complex" evidence=IGI] [GO:0006378 "mRNA polyadenylation"
            evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 PomBase:SPBC646.04 GO:GO:0005829
            GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0006378
            GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0005847
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 OMA:FPGGVAW EMBL:X79705
            EMBL:AB027883 PIR:JC6058 RefSeq:NP_595362.1
            ProteinModelPortal:Q10295 SMR:Q10295 MINT:MINT-2730388
            STRING:Q10295 EnsemblFungi:SPBC646.04.1 GeneID:2541099
            KEGG:spo:SPBC646.04 OrthoDB:EOG4SR150 NextBio:20802212
            Uniprot:Q10295
        Length = 566

 Score = 822 (294.4 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 153/303 (50%), Positives = 217/303 (71%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             V+GPG+DIDTL V P+H +R+ +FF +L  ML E  EVT+L  VPDA+VP++KFKF G+S
Sbjct:    93 VYGPGSDIDTLVVVPKHVSRD-NFFQDLEPMLREREEVTDLAAVPDAYVPIIKFKFLGIS 151

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARLS+  +P DL++S +++L+  +E+ V SLNG RVTDQIL+LVP    F+  LR
Sbjct:   152 IDLIFARLSVPRVPRDLELSDNNLLKGVEERCVLSLNGTRVTDQILQLVPNRAVFKHALR 211

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++FWA+RR +Y+NV GF GG+ WA++VARICQLYPNAV S++V++FFR+  QW WP P+
Sbjct:   212 AIKFWAQRRAIYANVVGFPGGVAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPI 271

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             LL  IE+G L +++W+P+  P DK H MPIITPAYP M +++N++ ST  I++ E  R  
Sbjct:   272 LLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAG 331

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
             EI + +      + W  LF+   FF  YK+YL I  +A+ A+    W G VES+LR L  
Sbjct:   332 EIADQIMVKA--LPWSALFQKHDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVT 389

Query:   360 KIE 362
             ++E
Sbjct:   390 RLE 392

 Score = 81 (33.6 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 20/51 (39%), Positives = 28/51 (54%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PIS A  T+ +      L   L++ NL+ES  E+  R +VL  L Q+
Sbjct:     7 GITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQI 57


>WB|WBGene00012528 [details] [associations]
            symbol:pap-1 species:6239 "Caenorhabditis elegans"
            [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
            regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
            "body morphogenesis" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0040027
            "negative regulation of vulval development" evidence=IMP]
            [GO:0007276 "gamete generation" evidence=IMP] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006378
            GO:GO:0010171 GO:GO:0040011 GO:GO:0048477 GO:GO:0006351
            GO:GO:0003723 GO:GO:0040035 GO:GO:0040027 GO:GO:0004652 KO:K14376
            eggNOG:COG5186 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376 HSSP:P25500
            EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
            ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
            EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
            KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
            InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
        Length = 655

 Score = 797 (285.6 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 170/416 (40%), Positives = 251/416 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADIDTL V PRH  R  DFF    +ML   P VTELH V +A VPVMK K+SGV 
Sbjct:    98 VHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNNDPNVTELHGVEEAFVPVMKLKYSGVE 156

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             +D+L+ARL+L  +P+  ++S D++L+N D+++VRSLNGCRV +Q+L+LVP+ + F  TLR
Sbjct:   157 LDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLR 216

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK  G+YSN  GF GGI WA+LVAR CQLYPNA PS LV R F +++ W WP+PV
Sbjct:   217 AIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPV 276

Query:   240 LLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
             +L  +        +L   VWDPRR   D++H+MPIITPA+P  NS++NV+ ST  ++ +E
Sbjct:   277 VLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNE 336

Query:   295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
                  EIC  + + ++   W  LFE   FF  YK+++ + ++A N ++  N+ G++ESR+
Sbjct:   337 ICEALEICRDISEGKSK--WTALFEEVNFFSRYKHFIALIMAAPNEEEELNYGGFLESRI 394

Query:   355 RQLTLKIERH-----TYNMLQCH-PHPG---DFSDKSKPLYCSYFMGLQRKQGVPVGEGE 405
             R L   +ER+      +N    H P P    D + ++K +   +F+GL+  +       +
Sbjct:   395 RLLVQSLERNQDIIIAHNDPNKHKPSPNAKFDVNPENKRVTV-WFIGLEFAE-----HAK 448

Query:   406 QFDIRLTVKEFKQAVSMYTLRKPGM------QISVAHVTRRNLPNFVFPGGVRPSR 455
               D+   ++ FK  V +      G+      QI + +V R +L   +    +R  R
Sbjct:   449 TLDLTNEIQRFKTNVELQASNVKGIGPNCQVQIDMFYVKRNSLIQVISAADLRRGR 504

 Score = 95 (38.5 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 21/52 (40%), Positives = 32/52 (61%)

Query:     9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             LG+++PISLA P   D+ +T  L + L+    YE +EE   R EVL  L+++
Sbjct:    12 LGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRL 63


>UNIPROTKB|Q9U2P3 [details] [associations]
            symbol:pap-1 "Protein PAP-1" species:6239 "Caenorhabditis
            elegans" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
            GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
            GO:GO:0006378 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
            GO:GO:0006351 GO:GO:0003723 GO:GO:0040035 GO:GO:0040027
            GO:GO:0004652 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            HSSP:P25500 EMBL:AL021474 PIR:G89189 RefSeq:NP_505683.1
            ProteinModelPortal:Q9U2P3 SMR:Q9U2P3 STRING:Q9U2P3 PaxDb:Q9U2P3
            EnsemblMetazoa:Y32F6A.3.1 EnsemblMetazoa:Y32F6A.3.2 GeneID:179458
            KEGG:cel:CELE_Y32F6A.3 UCSC:Y32F6A.3 CTD:179458 WormBase:Y32F6A.3
            InParanoid:Q9U2P3 OMA:CEALEIC NextBio:905480 Uniprot:Q9U2P3
        Length = 655

 Score = 797 (285.6 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 170/416 (40%), Positives = 251/416 (60%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADIDTL V PRH  R  DFF    +ML   P VTELH V +A VPVMK K+SGV 
Sbjct:    98 VHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNNDPNVTELHGVEEAFVPVMKLKYSGVE 156

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             +D+L+ARL+L  +P+  ++S D++L+N D+++VRSLNGCRV +Q+L+LVP+ + F  TLR
Sbjct:   157 LDILFARLALKEVPDTQELSDDNLLRNLDQESVRSLNGCRVAEQLLKLVPRQKEFCVTLR 216

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAK  G+YSN  GF GGI WA+LVAR CQLYPNA PS LV R F +++ W WP+PV
Sbjct:   217 AIKLWAKNHGIYSNSMGFFGGITWAILVARACQLYPNASPSRLVHRMFFIFSTWTWPHPV 276

Query:   240 LLCAIEEG-----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
             +L  +        +L   VWDPRR   D++H+MPIITPA+P  NS++NV+ ST  ++ +E
Sbjct:   277 VLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPEQNSTHNVTRSTATVIKNE 336

Query:   295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
                  EIC  + + ++   W  LFE   FF  YK+++ + ++A N ++  N+ G++ESR+
Sbjct:   337 ICEALEICRDISEGKSK--WTALFEEVNFFSRYKHFIALIMAAPNEEEELNYGGFLESRI 394

Query:   355 RQLTLKIERH-----TYNMLQCH-PHPG---DFSDKSKPLYCSYFMGLQRKQGVPVGEGE 405
             R L   +ER+      +N    H P P    D + ++K +   +F+GL+  +       +
Sbjct:   395 RLLVQSLERNQDIIIAHNDPNKHKPSPNAKFDVNPENKRVTV-WFIGLEFAE-----HAK 448

Query:   406 QFDIRLTVKEFKQAVSMYTLRKPGM------QISVAHVTRRNLPNFVFPGGVRPSR 455
               D+   ++ FK  V +      G+      QI + +V R +L   +    +R  R
Sbjct:   449 TLDLTNEIQRFKTNVELQASNVKGIGPNCQVQIDMFYVKRNSLIQVISAADLRRGR 504

 Score = 95 (38.5 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
 Identities = 21/52 (40%), Positives = 32/52 (61%)

Query:     9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             LG+++PISLA P   D+ +T  L + L+    YE +EE   R EVL  L+++
Sbjct:    12 LGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRL 63


>GENEDB_PFALCIPARUM|PFF1240w [details] [associations]
            symbol:PFF1240w "poly(A) polymerase PAP,
            putative" species:5833 "Plasmodium falciparum" [GO:0006378 "mRNA
            polyadenylation" evidence=ISS] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
            ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
            EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
            EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
        Length = 631

 Score = 617 (222.3 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
 Identities = 122/249 (48%), Positives = 163/249 (65%)

Query:    63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
             P +DID + + P++ TRE  FF E +  L +   V +L  +P+ + P+++F +  V IDL
Sbjct:   172 PNSDIDCIFLAPQNLTREI-FFNEFYLKLQQDRNVKKLQALPETYTPIIQFMYDDVDIDL 230

Query:   123 LYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 181
             L A L    + +    +  D IL+N DE TVRSLNG RV D IL  VP    FR TLR +
Sbjct:   231 LLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSLNGIRVADLILNSVPNKDYFRNTLRFI 290

Query:   182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 241
             + WAK RG+YSN+ GFLGGI+WALL A+ICQLYPN   S L+ +FF+VY+ W W  PVLL
Sbjct:   291 KLWAKSRGIYSNILGFLGGISWALLTAKICQLYPNFNVSQLICKFFKVYSIWNWKYPVLL 350

Query:   242 CAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
               I+    EG     VWDP +N KDK H+MPIITPA+PCMNS++NV+  T  I+++EF+R
Sbjct:   351 QNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCMNSTHNVTYCTRNILIEEFKR 410

Query:   298 GHEICEAME 306
              H I + ME
Sbjct:   411 AHSIIQYME 419

 Score = 175 (66.7 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
 Identities = 53/196 (27%), Positives = 92/196 (46%)

Query:   308 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 367
             N ++  W T+ EP   F  YK++L I I   N     +WKGW+ES++R L  K+E  T N
Sbjct:   444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501

Query:   368 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 424
              L+  P P   F  K K  YCS +F+ L      P      F++   +++F      +  
Sbjct:   502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559

Query:   425 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 482
              ++ P   +I++ +  R  +  F+       ++ +K   ++    ++  ++H + G  + 
Sbjct:   560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616

Query:   483 RKRKQTDDNVDTHLRN 498
              K KQ D+  D HL N
Sbjct:   617 HKNKQFDE-YDDHLFN 631

 Score = 103 (41.3 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
 Identities = 19/51 (37%), Positives = 34/51 (66%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             G+TEPISL  P+++D+ R+  + + L+  NL+E +     RE VLG ++++
Sbjct:    83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKL 133

 Score = 41 (19.5 bits), Expect = 3.3e-72, Sum P(3) = 3.3e-72
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query:   529 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 570
             L+F  +   E    N++ +ENN  D    ++N    ++H  K
Sbjct:   580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620


>UNIPROTKB|C6KT92 [details] [associations]
            symbol:PFF1240w "Poly(A) polymerase PAP, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0006378 "mRNA
            polyadenylation" evidence=ISS;IBA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 EMBL:AL844505 GO:GO:0004652 KO:K14376
            Gene3D:3.30.70.590 SUPFAM:SSF55003 HOGENOM:HOG000204376
            ProtClustDB:PTZ00418 RefSeq:XP_966239.1 ProteinModelPortal:C6KT92
            EnsemblProtists:PFF1240w:mRNA GeneID:3885690 KEGG:pfa:PFF1240w
            EuPathDB:PlasmoDB:PF3D7_0625600 OMA:MEDENNI Uniprot:C6KT92
        Length = 631

 Score = 617 (222.3 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
 Identities = 122/249 (48%), Positives = 163/249 (65%)

Query:    63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
             P +DID + + P++ TRE  FF E +  L +   V +L  +P+ + P+++F +  V IDL
Sbjct:   172 PNSDIDCIFLAPQNLTREI-FFNEFYLKLQQDRNVKKLQALPETYTPIIQFMYDDVDIDL 230

Query:   123 LYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 181
             L A L    + +    +  D IL+N DE TVRSLNG RV D IL  VP    FR TLR +
Sbjct:   231 LLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSLNGIRVADLILNSVPNKDYFRNTLRFI 290

Query:   182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 241
             + WAK RG+YSN+ GFLGGI+WALL A+ICQLYPN   S L+ +FF+VY+ W W  PVLL
Sbjct:   291 KLWAKSRGIYSNILGFLGGISWALLTAKICQLYPNFNVSQLICKFFKVYSIWNWKYPVLL 350

Query:   242 CAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
               I+    EG     VWDP +N KDK H+MPIITPA+PCMNS++NV+  T  I+++EF+R
Sbjct:   351 QNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCMNSTHNVTYCTRNILIEEFKR 410

Query:   298 GHEICEAME 306
              H I + ME
Sbjct:   411 AHSIIQYME 419

 Score = 175 (66.7 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
 Identities = 53/196 (27%), Positives = 92/196 (46%)

Query:   308 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 367
             N ++  W T+ EP   F  YK++L I I   N     +WKGW+ES++R L  K+E  T N
Sbjct:   444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501

Query:   368 MLQCHPHPGD-FSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT- 424
              L+  P P   F  K K  YCS +F+ L      P      F++   +++F      +  
Sbjct:   502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYEN--TFNLSYAIRDFIDIALNWPQ 559

Query:   425 -LRKPG-MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 482
              ++ P   +I++ +  R  +  F+       ++ +K   ++    ++  ++H + G  + 
Sbjct:   560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616

Query:   483 RKRKQTDDNVDTHLRN 498
              K KQ D+  D HL N
Sbjct:   617 HKNKQFDE-YDDHLFN 631

 Score = 103 (41.3 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
 Identities = 19/51 (37%), Positives = 34/51 (66%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             G+TEPISL  P+++D+ R+  + + L+  NL+E +     RE VLG ++++
Sbjct:    83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKL 133

 Score = 41 (19.5 bits), Expect = 3.3e-72, Sum P(3) = 3.3e-72
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query:   529 LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGK 570
             L+F  +   E    N++ +ENN  D    ++N    ++H  K
Sbjct:   580 LEFLDIVTKEENQKNKQVMENNDKDETNHNQNGYR-NNHKNK 620


>CGD|CAL0002451 [details] [associations]
            symbol:PAP1 species:5476 "Candida albicans" [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=ISS;IDA]
            [GO:0044011 "single-species biofilm formation on inanimate
            substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0006378 "mRNA polyadenylation" evidence=IDA] [GO:0005847 "mRNA
            cleavage and polyadenylation specificity factor complex"
            evidence=IEA] [GO:0071050 "snoRNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 CGD:CAL0002451 GO:GO:0005524
            GO:GO:0005634 GO:GO:0046872 GO:GO:0006378 GO:GO:0006351
            GO:GO:0003723 EMBL:AACQ01000100 GO:GO:0044011 GO:GO:0004652
            KO:K14376 EMBL:AF167162 EMBL:AB021667 RefSeq:XP_714613.1
            ProteinModelPortal:Q9UW26 STRING:Q9UW26 GeneID:3643763
            KEGG:cal:CaO19.3197 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 Uniprot:Q9UW26
        Length = 555

 Score = 785 (281.4 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
 Identities = 157/358 (43%), Positives = 238/358 (66%)

Query:    32 EKYLRDVNLYESQEEAVSREEVLGRLDQ-------VHGPGADIDTLCVGPRHATREEDFF 84
             E+++  V++ ++  E ++R+ V G++         V+GPG+DIDTL V P+H +R  DFF
Sbjct:    59 EEFVYKVSIKKNISEGMARD-VGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFF 116

Query:    85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
                +++L    E+ E+ PVPDA VP++K +F+G+SIDL++ARL +  +P DL +   ++L
Sbjct:   117 EVFYELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLL 176

Query:   145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
             +N DE+ +R+LNG RVTD+IL+LVPK   F+  LRC++ WA++R VY N+ GF GG+ WA
Sbjct:   177 KNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWA 236

Query:   205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
             +LVARICQLYPNAV +++V +FF +Y+QW WP PVLL  IE+G L ++VW+PR    D+ 
Sbjct:   237 MLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQ 296

Query:   265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
             H MP+ITPAYP M +++N+++ST ++++ EFQRG E+   +  N     W  L E   FF
Sbjct:   297 HRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFF 354

Query:   325 EAYKNYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
               YK YL I  +  +  A+ L+ + G VES+LR L  K+E     +   HP+   F +
Sbjct:   355 FRYKFYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFEN 410

 Score = 70 (29.7 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
 Identities = 19/56 (33%), Positives = 26/56 (46%)

Query:     5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             N Q  G+T PIS+A  T  +      L K L+    +ES+     R EVL  L  +
Sbjct:     2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSM 57

 Score = 37 (18.1 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query:   573 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 608
             G   GD R KG+  + N+ N+K+  +  +E  M+  ++
Sbjct:   428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465


>UNIPROTKB|Q9UW26 [details] [associations]
            symbol:PAPA "Poly(A) polymerase PAPa" species:237561
            "Candida albicans SC5314" [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IDA]
            [GO:0044011 "single-species biofilm formation on inanimate
            substrate" evidence=IMP] InterPro:IPR002934 InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF01909 Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425
            CGD:CAL0002451 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
            GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 EMBL:AACQ01000100
            GO:GO:0044011 GO:GO:0004652 KO:K14376 EMBL:AF167162 EMBL:AB021667
            RefSeq:XP_714613.1 ProteinModelPortal:Q9UW26 STRING:Q9UW26
            GeneID:3643763 KEGG:cal:CaO19.3197 eggNOG:COG5186
            Gene3D:3.30.70.590 SUPFAM:SSF55003 Uniprot:Q9UW26
        Length = 555

 Score = 785 (281.4 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
 Identities = 157/358 (43%), Positives = 238/358 (66%)

Query:    32 EKYLRDVNLYESQEEAVSREEVLGRLDQ-------VHGPGADIDTLCVGPRHATREEDFF 84
             E+++  V++ ++  E ++R+ V G++         V+GPG+DIDTL V P+H +R  DFF
Sbjct:    59 EEFVYKVSIKKNISEGMARD-VGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFF 116

Query:    85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
                +++L    E+ E+ PVPDA VP++K +F+G+SIDL++ARL +  +P DL +   ++L
Sbjct:   117 EVFYELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLL 176

Query:   145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
             +N DE+ +R+LNG RVTD+IL+LVPK   F+  LRC++ WA++R VY N+ GF GG+ WA
Sbjct:   177 KNIDEKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWA 236

Query:   205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
             +LVARICQLYPNAV +++V +FF +Y+QW WP PVLL  IE+G L ++VW+PR    D+ 
Sbjct:   237 MLVARICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQ 296

Query:   265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
             H MP+ITPAYP M +++N+++ST ++++ EFQRG E+   +  N     W  L E   FF
Sbjct:   297 HRMPVITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFF 354

Query:   325 EAYKNYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
               YK YL I  +  +  A+ L+ + G VES+LR L  K+E     +   HP+   F +
Sbjct:   355 FRYKFYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFEN 410

 Score = 70 (29.7 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
 Identities = 19/56 (33%), Positives = 26/56 (46%)

Query:     5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             N Q  G+T PIS+A  T  +      L K L+    +ES+     R EVL  L  +
Sbjct:     2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSM 57

 Score = 37 (18.1 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query:   573 GPMIGDPRNKGL--SFNSSNSKDAEKLAIEKIMSGPYV 608
             G   GD R KG+  + N+ N+K+  +  +E  M+  ++
Sbjct:   428 GTSKGDDRVKGVLHAENNDNNKENVENKVELHMTKLFI 465


>UNIPROTKB|F1NDP1 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR007010
            InterPro:IPR007012 InterPro:IPR011068 InterPro:IPR014492
            Pfam:PF04926 Pfam:PF04928 PIRSF:PIRSF018425 GO:GO:0005634
            GO:GO:0006351 GO:GO:0003723 GO:GO:0004652 GO:GO:0043631
            Gene3D:3.30.70.590 SUPFAM:SSF55003 GeneTree:ENSGT00390000017928
            EMBL:AADN02003685 IPI:IPI00587050 Ensembl:ENSGALT00000018089
            ArrayExpress:F1NDP1 Uniprot:F1NDP1
        Length = 620

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 178/386 (46%), Positives = 240/386 (62%)

Query:    74 PRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP 133
             PRH  R  DFF   ++ L +  EV +L  V +A VPV+K  F G+ ID+L+ARL+L  IP
Sbjct:     2 PRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 60

Query:   134 EDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN 193
             EDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR  +YSN
Sbjct:    61 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN 120

Query:   194 VAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQV 253
             + GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL   EE +L L V
Sbjct:   121 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV 180

Query:   254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 313
             WDPR NP D+YHLMPIITPAYP  NS+YNVS ST  +M++EF++G  I + +  ++A+  
Sbjct:   181 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE-- 238

Query:   314 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 373
             W  LFE   FF+ YK+Y+ +  SA        W G VES++R L   +E++ +  L  H 
Sbjct:   239 WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITL-AHV 297

Query:   374 HPGDF-SDKSKPLYCSY----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP 428
             +P  F + K  P    Y     +GL  K+     E    D+   ++ F   V    +   
Sbjct:   298 NPQSFPAPKENPDKEEYRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSK 356

Query:   429 ----GMQISVAHVTRRNL----PNFV 446
                  M+I+  HV R+ L    PN V
Sbjct:   357 MFEMDMKIAARHVKRKQLHQLLPNHV 382


>SGD|S000001710 [details] [associations]
            symbol:PAP1 "Poly(A) polymerase, one of three factors
            required for mRNA 3'-end pol" species:4932 "Saccharomyces
            cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0031123 "RNA
            3'-end processing" evidence=IEA] [GO:0005847 "mRNA cleavage and
            polyadenylation specificity factor complex" evidence=IDA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA;IDA] [GO:0006378 "mRNA polyadenylation"
            evidence=IDA;IMP] [GO:0005654 "nucleoplasm" evidence=IPI]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0071050 "snoRNA polyadenylation"
            evidence=IGI] [GO:0016779 "nucleotidyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926
            Pfam:PF04928 PIRSF:PIRSF018425 SGD:S000001710 GO:GO:0005524
            GO:GO:0000287 GO:GO:0006378 GO:GO:0006351 EMBL:BK006944
            GO:GO:0003723 GO:GO:0005847 GO:GO:0004652 EMBL:X65124
            RefSeq:NP_012929.4 GeneID:853873 KEGG:sce:YKR004C PDB:3C66
            PDBsum:3C66 RefSeq:NP_012927.3 GeneID:853871 KEGG:sce:YKR002W
            KO:K14376 GO:GO:0071050 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 GeneTree:ENSGT00390000017928 HOGENOM:HOG000204376
            OMA:FPGGVAW OrthoDB:EOG4SR150 EMBL:X60307 EMBL:Z28227 PIR:S19031
            PDB:1FA0 PDB:2HHP PDB:2O1P PDB:2Q66 PDBsum:1FA0 PDBsum:2HHP
            PDBsum:2O1P PDBsum:2Q66 ProteinModelPortal:P29468 SMR:P29468
            DIP:DIP-2297N IntAct:P29468 MINT:MINT-375429 STRING:P29468
            PaxDb:P29468 PeptideAtlas:P29468 EnsemblFungi:YKR002W CYGD:YKR002w
            EvolutionaryTrace:P29468 NextBio:975142 Genevestigator:P29468
            GermOnline:YKR002W Uniprot:P29468
        Length = 568

 Score = 791 (283.5 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
 Identities = 164/365 (44%), Positives = 230/365 (63%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VHGPG+DIDTL V P+H TRE DFF     +L E  E+ E+ PVPDA VP++K KFSG+S
Sbjct:    94 VHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLRERKELDEIAPVPDAFVPIIKIKFSGIS 152

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL+ ARL    +P  L +S  ++L+N DE+ +R+LNG RVTD+IL LVPK   FR  LR
Sbjct:   153 IDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALR 212

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WA+RR VY+N+ GF GG+ WA+LVARICQLYPNA  +++++RFF + ++W WP PV
Sbjct:   213 AIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPV 272

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             +L  IE+G L ++VW+P+   +D+ H MP+ITPAYP M +++N++ ST ++++ EF RG 
Sbjct:   273 ILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGV 332

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVESRLRQLT 358
             +I   +  N+    W  LFE   FF  YK YL I      +D+    W G VES++R L 
Sbjct:   333 QITNDIFSNKKS--WANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLV 390

Query:   359 LKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 417
             +K+E     +   HP    F S    P    Y M +Q K G    E     ++L   E K
Sbjct:   391 MKLEVLA-GIKIAHPFTKPFESSYCCPTEDDYEM-IQDKYGSHKTETALNALKLVTDENK 448

Query:   418 QAVSM 422
             +  S+
Sbjct:   449 EEESI 453

 Score = 62 (26.9 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
 Identities = 16/57 (28%), Positives = 30/57 (52%)

Query:     4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             S+ +  GIT P+S  G T  +      L + L+    +E+++E  +R +VL  L ++
Sbjct:     2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQEL 58


>RGD|1308673 [details] [associations]
            symbol:Papola "poly (A) polymerase alpha" species:10116 "Rattus
            norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IBA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=ISO;IBA]
            [GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
            evidence=IBA] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IBA] [GO:0006378 "mRNA polyadenylation"
            evidence=IBA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006378 GO:GO:0003723 GO:GO:0000398 GO:GO:0006369
            GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003 IPI:IPI00567428
            Ensembl:ENSRNOT00000047832 UCSC:RGD:1308673 ArrayExpress:F1MAC5
            Uniprot:F1MAC5
        Length = 681

 Score = 631 (227.2 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
 Identities = 117/198 (59%), Positives = 144/198 (72%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPV
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPV 285

Query:   240 LLCAIEEGSLGLQVWDPR 257
             LL   EE +L L VWDPR
Sbjct:   286 LLKQPEECNLNLPVWDPR 303

 Score = 102 (41.0 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 71

 Score = 76 (31.8 bits), Expect = 3.0e-77, Sum P(3) = 3.0e-77
 Identities = 36/157 (22%), Positives = 63/157 (40%)

Query:   314 WDTLFEPFTFFEAYKNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 372
             WD       FF    + +++ +++   +  R  W G VES++R L   +E++ +  L  H
Sbjct:   300 WDPRVSVL-FFPLQIHTVQLLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 357

Query:   373 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 427
              +P  F + K  P        + +GL  K+     E    D+   ++ F   V    +  
Sbjct:   358 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 416

Query:   428 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
                   M+I+  HV R+ L   + P  V   R    T
Sbjct:   417 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 452


>UNIPROTKB|D4A764 [details] [associations]
            symbol:Papola "Protein Papola" species:10116 "Rattus
            norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR002934
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            InterPro:IPR014492 Pfam:PF01909 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 RGD:1308673 GO:GO:0005634 GO:GO:0006351
            GO:GO:0003723 GO:GO:0004652 GO:GO:0043631 Gene3D:3.30.70.590
            SUPFAM:SSF55003 IPI:IPI00776821 Ensembl:ENSRNOT00000057215
            ArrayExpress:D4A764 Uniprot:D4A764
        Length = 657

 Score = 547 (197.6 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
 Identities = 101/174 (58%), Positives = 127/174 (72%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ 
Sbjct:   107 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 165

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             ID+L+ARL+L  IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct:   166 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 225

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
              ++ WAKR  +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct:   226 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 279

 Score = 102 (41.0 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 71

 Score = 75 (31.5 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
 Identities = 36/157 (22%), Positives = 63/157 (40%)

Query:   317 LFEPFTFFEAYKNYL---RIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCH 372
             +F  +  F  Y N +    + +++   +  R  W G VES++R L   +E++ +  L  H
Sbjct:   275 VFSKWYVFRLYYNKIDCRHVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AH 333

Query:   373 PHPGDF-SDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 427
              +P  F + K  P        + +GL  K+     E    D+   ++ F   V    +  
Sbjct:   334 VNPQSFPAPKESPDREEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 392

Query:   428 P----GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
                   M+I+  HV R+ L   + P  V   R    T
Sbjct:   393 KMFELDMKIAAMHVKRKQLHQLL-PSHVLQKRKKHST 428


>UNIPROTKB|H0YJ00 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
            EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
            Ensembl:ENST00000553461 Uniprot:H0YJ00
        Length = 203

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 110/188 (58%), Positives = 137/188 (72%)

Query:    70 LCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL 129
             LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G+ ID+L+ARL+L
Sbjct:     3 LCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLAL 61

Query:   130 WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRG 189
               IPEDLD+  DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR  
Sbjct:    62 QTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHN 121

Query:   190 VYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL 249
             +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL   EE +L
Sbjct:   122 IYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNL 181

Query:   250 GLQVWDPR 257
              L VWDPR
Sbjct:   182 NLPVWDPR 189


>TAIR|locus:2084274 [details] [associations]
            symbol:PAPS3 "poly(A) polymerase 3" species:3702
            "Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA;ISS] [GO:0016779
            "nucleotidyltransferase activity" evidence=IEA] [GO:0031123 "RNA
            3'-end processing" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=RCA] InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR011068 InterPro:IPR014492 Pfam:PF04926 Pfam:PF04928
            PIRSF:PIRSF018425 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006351 GO:GO:0003723 GO:GO:0004652
            GO:GO:0043631 KO:K14376 eggNOG:COG5186 Gene3D:3.30.70.590
            SUPFAM:SSF55003 EMBL:AK221644 IPI:IPI00518099 RefSeq:NP_187308.3
            UniGene:At.40500 ProteinModelPortal:Q56XM9 SMR:Q56XM9 IntAct:Q56XM9
            STRING:Q56XM9 EnsemblPlants:AT3G06560.1 GeneID:819835
            KEGG:ath:AT3G06560 TAIR:At3g06560 HOGENOM:HOG000006246
            InParanoid:Q56XM9 OMA:IDETSWK PhylomeDB:Q56XM9
            ProtClustDB:CLSN2699159 Genevestigator:Q56XM9 Uniprot:Q56XM9
        Length = 507

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 130/336 (38%), Positives = 192/336 (57%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             V+G  +DID LC+GP  A+  EDFF  L  ML    EV+ELH V DA VP+++FKF G+ 
Sbjct:    86 VYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGIL 145

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             +DL YA+L +  IP ++D+     L++ DE + + L+G R    IL+LVP ++ F++ LR
Sbjct:   146 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLR 205

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
             C++ WAKRRGVY N+ GFLGG++ A+L A +C   PNA  S L++ FF  +  W+WP PV
Sbjct:   206 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPV 265

Query:   240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
             +L      S G         P     LMPI  P       +  ++ ST   ++ EF  GH
Sbjct:   266 VLLEDTYPSTGA--------PPG---LMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGH 314

Query:   300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
              + +   K   +  W  LFE + +   Y  + +I +SA N +DL +W GWV+SR R L +
Sbjct:   315 NLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLI 372

Query:   360 KIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQ 394
             KIE   Y +  C P+P ++ +  +K     ++ GLQ
Sbjct:   373 KIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQ 405


>UNIPROTKB|F8WAT4 [details] [associations]
            symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
            GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
            EMBL:AC012498 IPI:IPI00893537 ProteinModelPortal:F8WAT4 SMR:F8WAT4
            Ensembl:ENST00000414060 ArrayExpress:F8WAT4 Bgee:F8WAT4
            Uniprot:F8WAT4
        Length = 234

 Score = 519 (187.8 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
 Identities = 96/174 (55%), Positives = 125/174 (71%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     +  L  V DA VPV+KF+F G+ 
Sbjct:    62 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 120

Query:   120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
             IDL++ARL++  I ++LD+  DS L++ D + +RSLNGCRVTD+IL LVP  + FR TLR
Sbjct:   121 IDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLR 180

Query:   180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
              ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNA  S LV +FF V+++W
Sbjct:   181 AVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKW 234

 Score = 40 (19.1 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query:    35 LRDVNLYESQEEAVSREEVLGRLDQV 60
             ++   ++E +EE   R  VLG+L+ +
Sbjct:     1 MKPFGVFEDEEELNHRLVVLGKLNNL 26


>UNIPROTKB|G3V2A0 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
            "polynucleotide adenylyltransferase activity" evidence=IEA]
            [GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR007010 InterPro:IPR007012 InterPro:IPR011068
            Pfam:PF04926 Pfam:PF04928 GO:GO:0005634 GO:GO:0006351 GO:GO:0003723
            GO:GO:0004652 GO:GO:0043631 EMBL:AL163051 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HGNC:HGNC:14981 ChiTaRS:PAPOLA
            ProteinModelPortal:G3V2A0 SMR:G3V2A0 Ensembl:ENST00000555626
            ArrayExpress:G3V2A0 Bgee:G3V2A0 Uniprot:G3V2A0
        Length = 475

 Score = 453 (164.5 bits), Expect = 9.0e-43, P = 9.0e-43
 Identities = 104/255 (40%), Positives = 145/255 (56%)

Query:   205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
             +LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL   EE +L L VWDPR NP D+Y
Sbjct:     1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60

Query:   265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
             HLMPIITPAYP  NS+YNVS ST  +M++EF++G  I + +  ++A+  W  LFE   FF
Sbjct:    61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE--WSKLFEAPNFF 118

Query:   325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSK 383
             + YK+Y+ +  SA        W G VES++R L   +E++ +  L  H +P  F + K  
Sbjct:   119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKEN 177

Query:   384 P----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVA 435
             P        + +GL  K+     E    D+   ++ F   V    +        M+I+  
Sbjct:   178 PDKEEFRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAM 236

Query:   436 HVTRRNL----PNFV 446
             HV R+ L    PN V
Sbjct:   237 HVKRKQLHQLLPNHV 251


>UNIPROTKB|H7C3W0 [details] [associations]
            symbol:PAPOLG "Poly(A) polymerase gamma" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
            GO:GO:0006351 GO:GO:0004652 HGNC:HGNC:14982 EMBL:AC011245
            EMBL:AC012498 ProteinModelPortal:H7C3W0 Ensembl:ENST00000453839
            Bgee:H7C3W0 Uniprot:H7C3W0
        Length = 168

 Score = 147 (56.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
 Identities = 31/65 (47%), Positives = 38/65 (58%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
             VH  GADID LCV PRH  R  DFF    + L     +  L  V DA VPV+KF+F G+ 
Sbjct:   100 VHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIE 158

Query:   120 I-DLL 123
             + +LL
Sbjct:   159 VVELL 163

 Score = 94 (38.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL   ++   ++E +EE   R  VLG+L+ +
Sbjct:    14 GITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 64


>UNIPROTKB|G3V3I9 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR002934 InterPro:IPR007012 Pfam:PF01909 Pfam:PF04928
            GO:GO:0006351 GO:GO:0004652 EMBL:AL163051 HGNC:HGNC:14981
            ChiTaRS:PAPOLA ProteinModelPortal:G3V3I9 SMR:G3V3I9
            Ensembl:ENST00000556619 ArrayExpress:G3V3I9 Bgee:G3V3I9
            Uniprot:G3V3I9
        Length = 177

 Score = 134 (52.2 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
 Identities = 29/58 (50%), Positives = 33/58 (56%)

Query:    60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSG 117
             VH  GADID LCV PRH  R  DFF   +  L    EV +L  V +A VPV+K  F G
Sbjct:   121 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDG 177

 Score = 85 (35.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEE 46
             GIT PISLA P + D + T+KL + L+   ++E +EE
Sbjct:    21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEE 57


>UNIPROTKB|G4N5I8 [details] [associations]
            symbol:MGG_06121 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR007010 InterPro:IPR007012
            InterPro:IPR009097 InterPro:IPR011068 Pfam:PF04926 Pfam:PF04928
            Pfam:PF03372 GO:GO:0005634 EMBL:CM001233 GO:GO:0006351
            GO:GO:0003723 SUPFAM:SSF55144 InterPro:IPR005135 SUPFAM:SSF56219
            GO:GO:0004652 GO:GO:0043631 SUPFAM:SSF55003 RefSeq:XP_003711988.1
            ProteinModelPortal:G4N5I8 EnsemblFungi:MGG_06121T0 GeneID:2684277
            KEGG:mgr:MGG_06121 InterPro:IPR007547 Pfam:PF04457 Uniprot:G4N5I8
        Length = 1238

 Score = 208 (78.3 bits), Expect = 7.2e-13, P = 7.2e-13
 Identities = 78/331 (23%), Positives = 142/331 (42%)

Query:    65 ADIDTLCVGPRHATREEDFFGELHQMLTEMP-----EVTELHPVPDAHVPVMKFKFSGVS 119
             +DID LC+GP  ++    FF    Q + +       E+  L  V      +++ +   V 
Sbjct:   679 SDIDCLCIGPLSSST---FFALTTQRIKKASVESGLEIKLLRRVRANSGVMLELEVMSVR 735

Query:   120 IDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFR 175
             +DL Y   +     W  P  L +  +  +     QT+  L   R  D +   +P +  FR
Sbjct:   736 VDLQYCAATAVAEQW--PAVLKLPPNDPIFALPAQTLGKLKALRDLDYLRETIPDLSKFR 793

Query:   176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN------AVPSMLVSRFFRV 229
                R ++ WA+ RG+YS   G+LGGI  ++L+AR+C+L         +VP +L S FF  
Sbjct:   794 LAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDYGQEVSVPDIL-SSFFSH 852

Query:   230 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 289
             Y  + W N +         L        R+ ++   ++    PA   +N++   +  +++
Sbjct:   853 YASFDWRNKIAFDPFFHKKLNYL-----RSAREPLAILGFFPPA---LNTTLAATVPSMK 904

Query:   290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------------FFEAYKNYLRID 334
              +  E  + +E+      NE  + WDT F   +               F  +YK++++I+
Sbjct:   905 AIARELSQANELL-----NEDGMTWDTFFGASSAGGDKTHSLARGAADFLSSYKSFVKIE 959

Query:   335 IS--AENADDLRNWKGWVESRLRQLTLKIER 363
             +     +      + GW+ESR   L + + R
Sbjct:   960 LQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990


>UNIPROTKB|Q59G05 [details] [associations]
            symbol:PAPOLG "Poly(A) polymerase gamma variant"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
            polyadenylation" evidence=IEA] InterPro:IPR007010
            InterPro:IPR011068 Pfam:PF04926 GO:GO:0005634 GO:GO:0003723
            GO:GO:0004652 GO:GO:0043631 KO:K14376 Gene3D:3.30.70.590
            SUPFAM:SSF55003 HOGENOM:HOG000204376 HOVERGEN:HBG053502
            RefSeq:NP_075045.2 UniGene:Hs.387471 GeneID:64895 KEGG:hsa:64895
            CTD:64895 HGNC:HGNC:14982 GenomeRNAi:64895 NextBio:67037
            EMBL:AC011245 EMBL:AC012498 EMBL:AB209304 IPI:IPI00555821
            ProteinModelPortal:Q59G05 SMR:Q59G05 STRING:Q59G05 PRIDE:Q59G05
            Ensembl:ENST00000412217 ArrayExpress:Q59G05 Bgee:Q59G05
            Uniprot:Q59G05
        Length = 382

 Score = 177 (67.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
 Identities = 46/185 (24%), Positives = 92/185 (49%)

Query:   290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
             +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G 
Sbjct:     3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60

Query:   350 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 405
             VES++R L   +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E  
Sbjct:    61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119

Query:   406 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 461
               D+   ++ F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   
Sbjct:   120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178

Query:   462 DSRRA 466
             D  R+
Sbjct:   179 DVNRS 183

 Score = 60 (26.2 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
 Identities = 21/83 (25%), Positives = 35/83 (42%)

Query:   535 DANELAG---SNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 591
             D N  +G   S R  ++++  DS R + N    +S   K D P +G+           NS
Sbjct:   179 DVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETER--------NS 230

Query:   592 KDAEKLAIEKIMSGPYVADQAFP 614
              +   + +EK +S P     + P
Sbjct:   231 AEPAAVIVEKPLSVPPAQGLSIP 253


>UNIPROTKB|F1PYB9 [details] [associations]
            symbol:PAPOLG "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006378 "mRNA polyadenylation" evidence=IBA]
            [GO:0005634 "nucleus" evidence=IBA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IBA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR007010 InterPro:IPR011068
            Pfam:PF04926 GO:GO:0005634 GO:GO:0006378 GO:GO:0003723
            GO:GO:0004652 Gene3D:3.30.70.590 SUPFAM:SSF55003
            GeneTree:ENSGT00390000017928 EMBL:AAEX03007549
            Ensembl:ENSCAFT00000004771 Uniprot:F1PYB9
        Length = 384

 Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 46/185 (24%), Positives = 92/185 (49%)

Query:   290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
             +M++EF++G  + + + + ++D  W  L EP  FF+ Y++Y+ +  SA   ++   W G 
Sbjct:     3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60

Query:   350 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 405
             VES++R L   +ER+ +  +   +P   PG+        Y S +F+G+  ++ V   E  
Sbjct:    61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119

Query:   406 QFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 461
               D+   ++ F   V    +   + K GM+I   HV ++ L +++ P  +   +  +   
Sbjct:   120 NIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL-PAEILQKKKKQSLS 178

Query:   462 DSRRA 466
             D  R+
Sbjct:   179 DVSRS 183


>UNIPROTKB|F1NDP2 [details] [associations]
            symbol:PAPOLA "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004652 "polynucleotide adenylyltransferase
            activity" evidence=IEA] [GO:0043631 "RNA polyadenylation"
            evidence=IEA] InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351
            GO:GO:0004652 GeneTree:ENSGT00390000017928 EMBL:AADN02003685
            IPI:IPI00582545 Ensembl:ENSGALT00000018088 ArrayExpress:F1NDP2
            Uniprot:F1NDP2
        Length = 109

 Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D M T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNL 70


>UNIPROTKB|G3V457 [details] [associations]
            symbol:PAPOLA "Poly(A) polymerase alpha" species:9606 "Homo
            sapiens" [GO:0004652 "polynucleotide adenylyltransferase activity"
            evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
            InterPro:IPR007012 Pfam:PF04928 GO:GO:0006351 GO:GO:0004652
            EMBL:AL163051 HGNC:HGNC:14981 ChiTaRS:PAPOLA
            ProteinModelPortal:G3V457 SMR:G3V457 Ensembl:ENST00000553689
            ArrayExpress:G3V457 Bgee:G3V457 Uniprot:G3V457
        Length = 111

 Score = 101 (40.6 bits), Expect = 0.00023, P = 0.00023
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
             GIT PISLA P + D + T+KL + L+   ++E +EE   R  +LG+L+ +
Sbjct:    21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNL 71


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      696       656   0.00096  120 3  11 22  0.40    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  54
  No. of states in DFA:  628 (67 KB)
  Total size of DFA:  371 KB (2184 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  55.68u 0.13s 55.81t   Elapsed:  00:00:03
  Total cpu time:  55.69u 0.13s 55.82t   Elapsed:  00:00:04
  Start:  Mon May 20 21:25:19 2013   End:  Mon May 20 21:25:23 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with PAPS1 PAPS1 PAPS1 poly(A) polymerase 1	protein from Arabidopsis thaliana	8.4e-210
BLAST match view associations BLAST with nPAP nPAP nPAP nuclear poly(a) polymerase	protein from Arabidopsis thaliana	5.5e-169
BLAST match view associations BLAST with PAPS2 PAPS2 PAPS2 poly(A) polymerase 2	protein from Arabidopsis thaliana	1.5e-164
BLAST match view associations BLAST with papA papA papA poly(A) polymerase	gene from Dictyostelium discoideum	7.0e-113
BLAST match view associations BLAST with papola papola papola poly(A) polymerase alpha	gene_product from Danio rerio	5.0e-104
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	5.0e-104
BLAST match view associations BLAST with papolg papolg papolg poly(A) polymerase gamma	gene_product from Danio rerio	3.6e-103
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	gene from Rattus norvegicus	2.1e-101
BLAST match view associations BLAST with hrg hrg hrg hiiragi	protein from Drosophila melanogaster	8.0e-100
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG PAPOLG protein	protein from Bos taurus	2.3e-99
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	2.9e-99
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	protein from Mus musculus	3.4e-99
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Sus scrofa	6.0e-99
BLAST match view associations BLAST with Papolg Papolg Papolg poly(A) polymerase gamma	protein from Mus musculus	7.6e-99
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	protein from Mus musculus	7.6e-99
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	1.2e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	1.2e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Bos taurus	1.2e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Canis lupus familiaris	1.6e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	1.6e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Sus scrofa	1.6e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	2.0e-98
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	2.0e-98
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	3.3e-98
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Uncharacterized protein	protein from Sus scrofa	8.7e-98
BLAST match view associations BLAST with PAPOLB PAPOLB PAPOLB Poly(A) polymerase beta	protein from Homo sapiens	9.8e-97
BLAST match view associations BLAST with Papolb Papolb Papolb poly (A) polymerase beta (testis specific)	gene from Rattus norvegicus	1.4e-95
BLAST match view associations BLAST with F1NL95 F1NL95 F1NL95 Uncharacterized protein	protein from Gallus gallus	7.8e-95
BLAST match view associations BLAST with F1P3A1 F1P3A1 F1P3A1 Uncharacterized protein	protein from Gallus gallus	7.8e-95
BLAST match view associations BLAST with F43G6.5 F43G6.5 F43G6.5	gene from Caenorhabditis elegans	6.2e-93
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6	gene from Caenorhabditis elegans	1.0e-90
BLAST match view associations BLAST with T15H9.6 T15H9.6 T15H9.6 Protein T15H9.6	protein from Caenorhabditis elegans	1.0e-90
BLAST match view associations BLAST with pap-1 pap-1 pap-1	gene from Caenorhabditis elegans	2.4e-87
BLAST match view associations BLAST with pap-1 pap-1 pap-1 Protein PAP-1	protein from Caenorhabditis elegans	2.4e-87
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w poly(A) polymerase PAP, putative	gene from Plasmodium falciparum	2.9e-86
BLAST match view associations BLAST with PFF1240w PFF1240w PFF1240w Poly(A) polymerase PAP, putative	protein from Plasmodium falciparum 3D7	2.9e-86
BLAST match view associations BLAST with PAP1 PAP1 PAP1	gene_product from Candida albicans	5.9e-86
BLAST match view associations BLAST with PAPA PAPA PAPA Poly(A) polymerase PAPa	protein from Candida albicans SC5314	5.9e-86
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	6.2e-85
BLAST match view associations BLAST with PAP1 PAP1 PAP1 Poly(A) polymerase, one of three factors required for mRNA 3'-end pol	gene from Saccharomyces cerevisiae	3.1e-83
BLAST match view associations BLAST with Papola Papola Papola poly (A) polymerase alpha	gene from Rattus norvegicus	3.0e-77
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	5.1e-58
BLAST match view associations BLAST with PAPS3 PAPS3 PAPS3 AT3G06560	protein from Arabidopsis thaliana	1.4e-57
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	2.9e-52
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	9.0e-43
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	1.1e-16
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	2.3e-14
BLAST match view associations BLAST with MGG_06121 MGG_06121 MGG_06121 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	7.2e-13
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Poly(A) polymerase gamma	protein from Homo sapiens	3.9e-12
BLAST match view associations BLAST with PAPOLG PAPOLG PAPOLG Uncharacterized protein	protein from Canis lupus familiaris	3.0e-10
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Uncharacterized protein	protein from Gallus gallus	0.00014
BLAST match view associations BLAST with PAPOLA PAPOLA PAPOLA Poly(A) polymerase alpha	protein from Homo sapiens	0.00023