BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005445
(696 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/714 (69%), Positives = 566/714 (79%), Gaps = 44/714 (6%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
+++GQRLGITEPISL GP + D+ +T++LEK+L LYESQEEAVSREEVLGRLDQ
Sbjct: 10 NNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVK 69
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VHGPGADIDTLCVGPRHATREEDFFGE
Sbjct: 70 IWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 129
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
LH+ML+EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQN
Sbjct: 130 LHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQN 189
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
ADEQTVRSLNGCRVTDQILRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALL
Sbjct: 190 ADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALL 249
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HL
Sbjct: 250 VARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHL 309
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYPCMNSSYNVS+STLRIM +EF+RG+EI E ME N+A DW TL EP+ FFEA
Sbjct: 310 MPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEA 367
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
YKNYL+I+I+AENADDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +
Sbjct: 368 YKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFH 427
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
C YFMGLQRKQGVP EGEQFDIRLTV EFK +V MYTL KPGM+I V HV RRN+PNFV
Sbjct: 428 CCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFV 487
Query: 447 FPGGVRPSRPSKGTWDSRRALERKVSSHTK-PGADDGRKRKQTDDNVDTHLRNAKCHATM 505
FPGGVRPSRP+K + RR LE VS+ GA+D +KRK+ D+NV+T+ RNAKC
Sbjct: 488 FPGGVRPSRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKCLVAA 547
Query: 506 PSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVS 565
SSS E +P++ST+++ SI + + MD N L + +EKVENN+ ++ NSVEV
Sbjct: 548 ASSSHEVLSSNPLVSTVNACSI--KVDSMDINMLGKTRKEKVENNIEHGLKNLNNSVEVP 605
Query: 566 SHNGKVDGPMIGDPRNKGLSFNSSNSK--DAEKLAIEKIMSGPYVADQAFPLELDQLEDD 623
NG+VDG + K LS + + +AEK+AIEKIMSGPYV+ QAFP ELD+LEDD
Sbjct: 606 PQNGEVDGSVRCSHPIKTLSSSGGSPSSTEAEKIAIEKIMSGPYVSHQAFPGELDELEDD 665
Query: 624 LELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELE 677
+E KNQ KDF GST+ +S S N+A E LT+ +G + LSPNGGL ELE
Sbjct: 666 VEYKNQVKDFTGSTKGSSAESSKANVAEEP-LTTTSGTVPCTILSPNGGLEELE 718
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/729 (66%), Positives = 556/729 (76%), Gaps = 71/729 (9%)
Query: 4 SNGQ---RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
+NGQ RLGIT+PISL GPT+ DL+++R+LEK+L+D+ LYES+EE+VSREEVLGRLDQ
Sbjct: 10 NNGQQQLRLGITDPISLGGPTEYDLIKSRELEKFLQDMGLYESREESVSREEVLGRLDQI 69
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPGADIDTLCVGPRHATREEDFF
Sbjct: 70 VKHWVKVISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 129
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
GELH+ML+EMPEVTELHPVPDAHVPV+KFKF GVSIDLLYA+LSLWVIPEDLDISQDSIL
Sbjct: 130 GELHRMLSEMPEVTELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSIL 189
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
QNADEQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWA
Sbjct: 190 QNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWA 249
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
LLVARICQL+PNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGLQVWDPRRNPKD+Y
Sbjct: 250 LLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRY 309
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP MNSSYNVS STLRIM +EFQRG+EICEAME ++A DW+TLFE F+FF
Sbjct: 310 HLMPIITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKA--DWNTLFESFSFF 367
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
+AYKNYL+IDI AEN DDLR WKGWVESRLRQLTLKIERHT+NMLQCHPHPG+F+DKS+P
Sbjct: 368 DAYKNYLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRP 427
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
L+CSYFMGLQRKQGVP EGEQFDIR+TV+EFK +V+MYT KPGM+I V HV RRN+P+
Sbjct: 428 LHCSYFMGLQRKQGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPS 487
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKV--SSHTKPGADDGRKRKQTDDNVDTHLRNAKCH 502
FVFPGG+RPSRPSK TWDS+R+ K G+DD KRK+ DDNV + AK
Sbjct: 488 FVFPGGIRPSRPSKTTWDSKRSSAEKSGEGKGVSDGSDDKGKRKRIDDNVANATKIAKPD 547
Query: 503 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSV 562
+T P SGE GSP T+S N + E VENNLTD S++
Sbjct: 548 STSP-LSGEVNNGSPSAGTVS-------LLLTSTNAVGEPRDEPVENNLTDDFSNSKDLT 599
Query: 563 EVSSHNGKVDGPMIGDPRNKG-LSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLE 621
+HNG+++ P NK L N + SK AEKLAIE IMSGPYV +QA P ELD+LE
Sbjct: 600 GFYAHNGELNPP------NKVLLGINEAPSKVAEKLAIETIMSGPYVTNQALPQELDELE 653
Query: 622 DDLELKNQAKDF-AGS----TQNNSLGSCAVNIAAE--------ATLTSMNGGSSSSALS 668
DD E + Q KDF AG+ T ++ + S + + A+ A + S NG S+AL
Sbjct: 654 DDFECRTQVKDFGAGANTKDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALC 713
Query: 669 PNGGLGELE 677
PNGGL ELE
Sbjct: 714 PNGGLEELE 722
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/621 (73%), Positives = 517/621 (83%), Gaps = 8/621 (1%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VHGPGADIDTLCVGPRHATREEDFFGELH+ML+EMPEVTELHPVPDAHVPVM+FKFSGVS
Sbjct: 283 VHGPGADIDTLCVGPRHATREEDFFGELHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVS 342
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDLLYA+LSLWVIPEDLD+SQDSILQNADEQTVRSLNGCRVTDQILRLVP IQNFRTTLR
Sbjct: 343 IDLLYAKLSLWVIPEDLDVSQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLR 402
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV
Sbjct: 403 FMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPV 462
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+LCAIEEG+LGLQVWDPR+ PKD++HLMPIITPAYPCMNSSYNVS+STLRIM +EF+RG+
Sbjct: 463 MLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGN 522
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
EI E ME N+A DW TL EP+ FFEAYKNYL+I+I+AENADDLR WKGWVESRLRQLTL
Sbjct: 523 EISEVMEANKA--DWXTLCEPYPFFEAYKNYLQIEIAAENADDLRKWKGWVESRLRQLTL 580
Query: 360 KIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 419
KIERHTYNMLQCHPHPGDFSDKS+P +C YFMGLQRKQGVP EGEQFDIRLTV EFK +
Sbjct: 581 KIERHTYNMLQCHPHPGDFSDKSRPFHCCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHS 640
Query: 420 VSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTK-PG 478
V MYTL KPGM+I V HV RRN+PNFVFPGGVRPSRP+K + RR LE VS+ G
Sbjct: 641 VGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVASERRRVLEPNVSTQAVLEG 700
Query: 479 ADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANE 538
A+D +KRK+ D+NV+T+ RNAKC SSS E +P++ST+++ SI + + MD N
Sbjct: 701 AEDSKKRKREDENVETNSRNAKCLVAAASSSHEVLSSNPLVSTVNACSIKV--DSMDINM 758
Query: 539 LAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSK--DAEK 596
L + +EKVENN+ ++ NSVEV NG+VDG + K LS + + +AEK
Sbjct: 759 LGKTRKEKVENNIEHGLKNLNNSVEVPPQNGEVDGSVRCSHPIKTLSSSGGSPSSTEAEK 818
Query: 597 LAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLT 656
+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S N+A E LT
Sbjct: 819 IAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEEP-LT 877
Query: 657 SMNGGSSSSALSPNGGLGELE 677
+ +G + LSPNGGL ELE
Sbjct: 878 TTSGTVPCTILSPNGGLEELE 898
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 49/58 (84%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
+++ QRLGITEPISL GP + D+ +T++LEK+L LYESQEEAVSREEVLGRLDQ+
Sbjct: 10 NNSSQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQI 67
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/727 (64%), Positives = 539/727 (74%), Gaps = 73/727 (10%)
Query: 2 GSSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
G +NGQ RLGIT+PISL+GPT+ D+++TR+LEKYL+D LYESQE+AV+REEVLGRLDQ
Sbjct: 8 GRNNGQQRLGITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEVLGRLDQI 67
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPGADIDTLCVGPRHATREEDFF
Sbjct: 68 VKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF 127
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
GELH+ML+EMPEV+ELHPVPDAHVPVM+FK SGVSIDLLYA+LSLWVIPEDLDISQDSIL
Sbjct: 128 GELHKMLSEMPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSIL 187
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
QN DEQTVRSLNGCRVTD+ILRLVP IQ+FRTTLRCMRFWAKRRGVYSNV+GFLGGINWA
Sbjct: 188 QNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWA 247
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
LLVARICQLYPNA+P+MLVSRFFRV+TQWRWPNPV+LCA EEGSLGLQVWDPRRNPKD+Y
Sbjct: 248 LLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRY 307
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYPCMNSSYNVS STLRIM +EF+RGH+ICE ME+N++ DWDTLFEP+ FF
Sbjct: 308 HLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKS--DWDTLFEPYPFF 365
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
EAYKNYL+IDI+AEN DD+R WKGWVESRLRQLTLKIERHTYNMLQCHP+PGDFSDKS+P
Sbjct: 366 EAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRP 425
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
+ YFMGLQRKQG P GEQFDIRLTV EFK +V++YT RK GM+I V+HV RR++PN
Sbjct: 426 FHHCYFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPN 485
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGA----------DDGRKRKQTDDNVDT 494
FVFPGGVRPSR SK TWD RR+ E K S T+ + DD RKR + DDN +T
Sbjct: 486 FVFPGGVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRIDDNANT 545
Query: 495 HLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDS 554
+LRN +C A S E E S + +T S S ++ F AN L NL D
Sbjct: 546 NLRNGECLAMAHSHPEEVHEVSQVSNTSSCSIKDVNFIPTSANNL---------ENLAD- 595
Query: 555 IRGSRNSVEVSSHNGKVDGPMIGDPRNKGLS---FNSSNSKDAEKLAIEKIMSGPYVADQ 611
VSS N G + P +S ++SN K+AEKLAI+KI+S Y + Q
Sbjct: 596 ---------VSSQNNGDHGSLRVSPSTNNVSDAAADTSNCKEAEKLAIQKILSDSYDSHQ 646
Query: 612 AFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLT-SMNGGSSSSALSPN 670
FP E ++LE D + NQAKDF + Q + + S N + T S N SS+ N
Sbjct: 647 DFPCETEELE-DFDYNNQAKDFGATKQGSPMMSSVANTSPLVLPTVSCNEARQSSSSYYN 705
Query: 671 GGLGELE 677
GGL ELE
Sbjct: 706 GGLEELE 712
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/751 (60%), Positives = 540/751 (71%), Gaps = 88/751 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
QRLGITEPISL+GPT+ D+ +TR+LEKYL+D LYE+Q+EA+ REEVLGRLDQ
Sbjct: 15 QRLGITEPISLSGPTEYDVAKTRELEKYLQDAGLYENQDEAICREEVLGRLDQIVKIWVK 74
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADID LCVGPRHATR+EDFFGELH+M
Sbjct: 75 TICRAKGFNEQLVKEANAMIFTFGSYRLGVHGPGADIDVLCVGPRHATRKEDFFGELHKM 134
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L+EMPEVTELHPVPDAHVPVM FKF+GVS+DLLYA+LSLWVIPEDLD+SQ++ILQ DEQ
Sbjct: 135 LSEMPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDEQ 194
Query: 151 TVRSLNGCRVTDQILRLVP-----------------------------KIQNFRTTLRCM 181
TVRSLNGCRVTDQIL LVP ++QNFRTTLRC+
Sbjct: 195 TVRSLNGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRCV 254
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 241
+ WAK RGVYSNVAGFLGGINWALLV RICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+L
Sbjct: 255 KLWAKCRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVML 314
Query: 242 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 301
C I+EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS STLR+M +EFQRG EI
Sbjct: 315 CTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDEI 374
Query: 302 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI 361
CEAME N+A DWDTLFEP+ FFE+YKNYLRIDISAEN DDLRNWKGWV+SRLRQLTLKI
Sbjct: 375 CEAMEANKA--DWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLKI 432
Query: 362 ERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 421
ER+TY MLQCHPHPGDFSDKS+PL+CSYFMGLQRKQGVP EG QFD+RLTV+EFK +V+
Sbjct: 433 ERNTYGMLQCHPHPGDFSDKSRPLHCSYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSVN 492
Query: 422 MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKP---- 477
YT KPGM IS++HV RRN+P FVFPGGVRP PSK TW S+R E +VS H +
Sbjct: 493 AYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSKVTWVSKRRSELRVSGHGQAEKSQ 552
Query: 478 -----GADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFE 532
GA++ RKRKQ +D+ D LRN++ +++P SS + E +S +S S+ + +
Sbjct: 553 VGKELGANNDRKRKQAEDSGD-DLRNSRSFSSLPPSSRDVHEDGNPVSIANSCSV--KCD 609
Query: 533 HMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSK 592
+ N ++ EK + N + G R + N ++ P++ + + SN +
Sbjct: 610 DTELNCMSEQKSEKPDLNFSGECPGDRETDGSVKSNSQII-PLLA-------ATDRSNFE 661
Query: 593 DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAE 652
+AEK+ I+KI+ GP QAFP E D+LEDDLE +N+ KDF G+ N + S +AAE
Sbjct: 662 EAEKVVIQKIVCGPCEVHQAFPEEPDELEDDLEYRNKVKDFGGNLANINFDSTKSVVAAE 721
Query: 653 ATLTSMNGGSSSSALSPNGGLGELEVLSANL 683
S SSS+ + NGGL ELE L L
Sbjct: 722 PVF-SQKENSSSTHIYSNGGLEELECLWGAL 751
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/728 (63%), Positives = 545/728 (74%), Gaps = 61/728 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
QRLGITEPISLAGPT+DD+++TR+LEKYL+ V LYESQEEAV REEVLGRLDQ
Sbjct: 14 QRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEVLGRLDQIVKIWVK 73
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGPRHA+R+EDFFGEL +M
Sbjct: 74 NISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKM 133
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L+EM EVTELHPVPDAHVPVMKFKF+GVS+DLLYARL+LWVIP+DLDISQ+SILQN DEQ
Sbjct: 134 LSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQ 193
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TV SLNGCRVTDQ+LRLVP IQ FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALLVARI
Sbjct: 194 TVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARI 253
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLMPII
Sbjct: 254 CQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPII 313
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNS+YNV++STLR+M DEF+RG EICEAME ++A DWDTLFEP+ FFE+YKNY
Sbjct: 314 TPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKA--DWDTLFEPYPFFESYKNY 371
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 390
L+IDI+AENADDLR WKGWVESRLRQLTLKIERHTY MLQCHPHPG+FSD S+P + YF
Sbjct: 372 LQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCYF 431
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 450
MGLQRKQGVPV EGEQFDIRLTV+EFK +V+ YTL KPGM I V+HV RRN+PN++FPGG
Sbjct: 432 MGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGG 491
Query: 451 VRPSRPSKGTWDSRRALERKVSSH---TKP--------GADDGRKRKQTDDNVDTHLRNA 499
VRP+ PSK T +++++ + +V H KP GADD RKRK+++D +D + RN+
Sbjct: 492 VRPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKRSEDIMDNNPRNS 551
Query: 500 KCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSR 559
K ++ S E E I +SSS +++F+ + N + G EK N I
Sbjct: 552 KSPVSLAPPSREVNED--ISPISASSSCSMKFDESEVNSIGGQKSEKPCLNSPGEIPSGD 609
Query: 560 NSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQ 619
+ S N + P++ + ++SNSK+ EKLAIEKIMSGPY A QAFP E ++
Sbjct: 610 SGTNGSVTNNQQVNPVLA-------AADTSNSKEEEKLAIEKIMSGPYDAHQAFPEEPEE 662
Query: 620 LEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEV- 678
LEDD + KNQ KD G+ +NN + AE + S S+ S N L ELE
Sbjct: 663 LEDDTQYKNQDKDSGGNMKNNMESLLSKPAVAEEPVISKEITCSTHLFS-NEILEELEPA 721
Query: 679 -LSANLIT 685
LSA L++
Sbjct: 722 ELSAPLLS 729
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/685 (64%), Positives = 521/685 (76%), Gaps = 59/685 (8%)
Query: 4 SNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
+NGQ RLGITEPISLAGPTDDD ++T +LEKYL+ V LYESQEEAV REEVLGRLDQ
Sbjct: 10 NNGQQRLGITEPISLAGPTDDDAIKTLELEKYLQGVGLYESQEEAVVREEVLGRLDQIVK 69
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VHGPGADIDTLCVGPRHA+R+EDFFG
Sbjct: 70 IWVKNISRAKGFNEQLVHEANAKIFTSGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGG 129
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
L +ML+EM EVTELHPVPDAHVPV+KFKF+GVS+DLLYARL+LWVIPEDLDISQ+SILQ+
Sbjct: 130 LQKMLSEMQEVTELHPVPDAHVPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQS 189
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DEQTV SLNGCRVTDQ+LRLVP IQ FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALL
Sbjct: 190 VDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALL 249
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYPNA+P MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHL
Sbjct: 250 VARICQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHL 309
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITP YPCMNS+YNV++STLR+M DEF+RG EICEAME ++A DWDTLFEP+ FFE+
Sbjct: 310 MPIITPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKA--DWDTLFEPYPFFES 367
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
YKNYL+IDI+AENADDLR WKGWV SRLRQLTLKIERHTY MLQCHPHPG+FSD S+P +
Sbjct: 368 YKNYLQIDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFH 427
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
YFMGLQRKQGVPV EGEQFDIRLTV+EFK +V+ YTL KPGM I V+HV R N+PN++
Sbjct: 428 HCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYI 487
Query: 447 FPGGVRPSRPSKGTWDSRRALERKVSSH---TKP--------GADDGRKRKQTDDNVDTH 495
FPGGVRP+ PSK T +++++ + + S H KP GADD RKRK+++DN+D +
Sbjct: 488 FPGGVRPTFPSKVTAENKQSSKSRASGHGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNN 547
Query: 496 LRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSI 555
RN++ ++P S E E I +SSS +++F+ + N + G EK+ I
Sbjct: 548 PRNSRSPVSLPPPSREVHED--ISPISASSSCSMKFDESEVNSIGGQKSEKLCLKSPGEI 605
Query: 556 RGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPL 615
+ S + + P++ + ++SNSK+ EKLAIEKIMSG Y A QAF
Sbjct: 606 PSGDSGTNGSVTSNQQVNPVLA-------AADTSNSKEEEKLAIEKIMSGLYDAHQAFQE 658
Query: 616 ELDQLEDDLELKNQAKDFAGSTQNN 640
E +LED+ + KNQ KD + + +NN
Sbjct: 659 EPKELEDNTQYKNQDKDSSANMKNN 683
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/738 (60%), Positives = 535/738 (72%), Gaps = 71/738 (9%)
Query: 4 SNG-QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
SNG Q LGITEPISLAGPT++D+ +T +LEKYL+ LYESQ+EAV REEVLGRLDQ
Sbjct: 10 SNGKQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIVK 69
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VHGPGADIDTLCVGPRHATR+EDFFGE
Sbjct: 70 IWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGE 129
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
L +ML+EM EVTELHPVPDAHVPVMKFKF+GVS+DLLYARL+LWVIPEDLDISQ+SILQN
Sbjct: 130 LQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQN 189
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DEQTV SLNGCRVTDQ+LRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGIN ALL
Sbjct: 190 VDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALL 249
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
V RICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNP+D+YHL
Sbjct: 250 VGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHL 309
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYPCMNS+YNV+TSTLRIM DEF+RG EICEAME ++A DWDTLFEP+ FFEA
Sbjct: 310 MPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKA--DWDTLFEPYPFFEA 367
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
YKNYL+IDI+AEN DDLR WKGWVESRLRQLTLKIE++TY MLQCHP+PG+FSDKS+ +
Sbjct: 368 YKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFH 427
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
YFMGLQRKQGVPV EGEQFDIR TV+EFK V+ YT KPGM I V+HV RRN+PNF+
Sbjct: 428 QCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFI 487
Query: 447 FPGGVRPSRPSKGTWDSRRALERKVSSHTKP-----------GADDGRKRKQTDDNVDTH 495
FPGGVRPS PS+ ++RR+ + +V+ ++ GADD RKRK+ +DN ++
Sbjct: 488 FPGGVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKRKRLEDNNNSR 547
Query: 496 LRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSI 555
+ + + P+ + + +P +T SS +++F+ + N + EK+ I
Sbjct: 548 VSKSSASVSPPNRNVP-EDRNPFSAT---SSCSMKFDDSEVNSMGDQKSEKLCLKSVGEI 603
Query: 556 -RGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFP 614
G + ++ N ++D P ++SN+K+ E+LAIE IM+GPY A QA
Sbjct: 604 PAGDSVTNGSATDNKQLDAP------------DTSNTKEEERLAIEHIMAGPYEAHQALT 651
Query: 615 LELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVN-IAAEATLTSMNGGSSSSALSPNGGL 673
E D+LE D+ +NQ D GS ++N+ S N + E + S S+ + NGGL
Sbjct: 652 EEPDELEQDMGYRNQVNDNGGSVKSNNFDSSNPNPVVVEDQVISKETVCSTHSFC-NGGL 710
Query: 674 GELEV--LSANLITSIGA 689
ELE L+A L I A
Sbjct: 711 EELEPAELTAPLFCGIPA 728
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/508 (78%), Positives = 441/508 (86%), Gaps = 41/508 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
QRLGITEPISL GPT+ D+ +TR+LEK+L+D LYESQEEAVSREEVLGRLDQ
Sbjct: 5 QRLGITEPISLGGPTEYDVTKTRELEKFLQDAGLYESQEEAVSREEVLGRLDQIVKNWVK 64
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGPRHATREEDFFGELH+M
Sbjct: 65 VISRAKRLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGELHRM 124
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L+EMPEVTELHPVPDAHVPVM+FKF GVSIDLLYA+LSLWVIPEDLD+SQDS+L NADEQ
Sbjct: 125 LSEMPEVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADEQ 184
Query: 151 TVRSLNGCRVTDQILRLVPKIQ---NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
TVRSLNGCRVTDQILRLVP IQ NFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLV
Sbjct: 185 TVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLV 244
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQL+PNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLM
Sbjct: 245 ARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLM 304
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYP MNSSYNVS+STLRIM +EFQRG+EICEAME ++A+ WDTLFEPF+FFEAY
Sbjct: 305 PIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAE--WDTLFEPFSFFEAY 362
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 387
KNYL+IDISAEN DDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPG+FSDKS+PL+C
Sbjct: 363 KNYLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPLHC 422
Query: 388 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 447
SYFMGLQRKQGVPV EGEQFDIR+TV EFK +V+MYTL KPGM+I V HV +RN+PNFVF
Sbjct: 423 SYFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFVF 482
Query: 448 PGGVRPSRPSKGTWDSRRALERKVSSHT 475
P GVRPSRPSK TWD RR+ E KV++++
Sbjct: 483 PSGVRPSRPSKATWDGRRSSEAKVANNS 510
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/732 (60%), Positives = 508/732 (69%), Gaps = 112/732 (15%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
NGQR GITEPISL GPT+ D+++TR+LEK+L+DV LYES+EEAV REEVLG LDQ
Sbjct: 7 NGQRFGITEPISLGGPTELDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTW 66
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VHGPGADIDTLCVGPRHATRE DFFGEL
Sbjct: 67 IKTISRTKGLNDELLHLANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQ 126
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
+ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLDISQDSILQNAD
Sbjct: 127 RMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNAD 186
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
EQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVA
Sbjct: 187 EQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVA 246
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNA+P+ML SRFFRVY QWRWPNPVLLC+++EGS GLQVWDPRRNPKD+ H+MP
Sbjct: 247 RICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMP 306
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYPCMNSSYNVS STLRIM EFQRG EICEAME N+A DWDTLFEPF FFEAYK
Sbjct: 307 IITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKA--DWDTLFEPFAFFEAYK 364
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 388
NYL+IDISA N +DLR WKGWVESRLRQLTLKIERHTY+MLQCHPHP DF D S+PL+CS
Sbjct: 365 NYLQIDISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPLHCS 424
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 448
YFMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV+H+ RR+LPN+VFP
Sbjct: 425 YFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFP 484
Query: 449 GGVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTD 489
GGVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 485 GGVRPSHTSKGTWDSNRRSEHRNSSTSSALAAATTTTEMSSESKAGSNSPVDGKKRKWGD 544
Query: 490 DNVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV 547
+ T LR +K A ++P + E +P + +I SS +
Sbjct: 545 NETLTDQLRKSKHIAVSVPVENCEGGSPNPSVGSICSSPM-------------------- 584
Query: 548 ENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPY 607
+ NGK + P+ DP ++F + + AE L IEKI +
Sbjct: 585 ---------------KDYCTNGKSE-PISKDPPENVVAF---SKEPAESLPIEKIAT--- 622
Query: 608 VADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSAL 667
QA E ++LE+ + NQ + + + A AT+ S+ SA
Sbjct: 623 --PQAPSQETEELEESFDFGNQVVE--------QISHKVAILTATATIPPFEATSNGSAF 672
Query: 668 SPNGGLGELEVL 679
PN + ELEVL
Sbjct: 673 -PNEAVEELEVL 683
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/484 (78%), Positives = 416/484 (85%), Gaps = 38/484 (7%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
+++GQRLGITEPISL GP + D+ +T++LEK+L LYESQEEAVSREEVLGRLDQ
Sbjct: 10 NNSGQRLGITEPISLGGPNELDVTKTQELEKFLAAAGLYESQEEAVSREEVLGRLDQIVK 69
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VHGPGADIDTLCVGPRHATREEDFFGE
Sbjct: 70 IWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFGE 129
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
LH+ML+EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQN
Sbjct: 130 LHKMLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQN 189
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
ADEQTVRSLNGCRVTDQILRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALL
Sbjct: 190 ADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALL 249
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HL
Sbjct: 250 VARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHL 309
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYPCMNSSYNVS+STLRIM +EF+RG+EI E ME N+A DW TL EP+ FFEA
Sbjct: 310 MPIITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEA 367
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
YKNYL+I+I+AENADDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +
Sbjct: 368 YKNYLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFH 427
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
C YFMGLQRKQGVP EGEQFDIRLTV EFK +V MYTL KPGM+I V HV RRN+PNFV
Sbjct: 428 CCYFMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFV 487
Query: 447 FPGG 450
FPGG
Sbjct: 488 FPGG 491
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 593 DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAE 652
+AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S N+A E
Sbjct: 529 EAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEE 588
Query: 653 ATLTSMNGGSSSSALSPNGGLGELE 677
LT+ +G + LSPNGGL ELE
Sbjct: 589 P-LTTTSGTVPCTILSPNGGLEELE 612
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/733 (58%), Positives = 500/733 (68%), Gaps = 117/733 (15%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
NGQR G++EPIS+ GPT+ D+++TR+LEK+L+DV LYES+EEAV REEVLG LDQ
Sbjct: 7 NGQRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILDQIVKTW 66
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VHGPGADIDTLCVGPRHATRE DFFGEL
Sbjct: 67 IKTISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGDFFGELQ 126
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
+ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNAD
Sbjct: 127 RMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNAD 186
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
EQTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVA
Sbjct: 187 EQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVA 246
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MP
Sbjct: 247 RICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMP 306
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+A DWDTLFEPF FFEAYK
Sbjct: 307 IITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYK 364
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 388
NYL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CS
Sbjct: 365 NYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCS 423
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 448
YFMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFP
Sbjct: 424 YFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFP 483
Query: 449 GGVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTD 489
GGVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 484 GGVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGD 543
Query: 490 DNVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV 547
T RN+K A ++P + E +P + +I SS +
Sbjct: 544 SETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPM-------------------- 583
Query: 548 ENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGP 606
+ NGK + P+ DP ++F SKD E L IEKI +
Sbjct: 584 ---------------KDYCTNGKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT-- 621
Query: 607 YVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSA 666
QA E ++LE+ + NQ + + ++A AT+ S+ S
Sbjct: 622 ---PQAH--ETEELEESFDFGNQVIE--------QISHKVAVLSATATIPPFEATSNGSP 668
Query: 667 LSPNGGLGELEVL 679
P + ELEVL
Sbjct: 669 F-PYEAVEELEVL 680
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/672 (59%), Positives = 483/672 (71%), Gaps = 62/672 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
QRLGITEPISL GPT+ D+++TR+LEKYL+D LYE+Q+EAV EVLGRLDQ
Sbjct: 15 QRLGITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQQEAVX--EVLGRLDQIVKIWVK 72
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH PGA+IDTLCVGPRHA+R+EDFFG+LH+M
Sbjct: 73 IISRAKGLNKQLVQEANAKIFTFGSYXLGVHSPGANIDTLCVGPRHASRDEDFFGDLHRM 132
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L++MPEVTELHPVPDAHVPVM+FKF+GV IDLLYA+LSL VIPEDLDISQ+ ILQNADE+
Sbjct: 133 LSKMPEVTELHPVPDAHVPVMRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADEE 192
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN--VAGFLGGINWALLVA 208
TV SLNGCRVTD++L +QNF TTLRCM+FWAK GVY V +LGGINWALLVA
Sbjct: 193 TVCSLNGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLVA 247
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R C L+PNA+P+MLVSRFFRVYTQW WPNPV+LCAIEEGS+GLQ+WDPRR P D++HLMP
Sbjct: 248 RTCXLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMP 307
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAY CMNSSYNVS+ TL IM +EFQRG+EICE ++ D+ W + F +YK
Sbjct: 308 IITPAYACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQD--DLTWAFKLK-FPCSNSYK 364
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 388
NYL+IDIS ENADDLR WKGWVES LRQL L+IERH Y MLQCHPHPGD SDKS+P +CS
Sbjct: 365 NYLQIDISGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRPFHCS 424
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 448
FM LQRKQGVPV +G QFDIRLTV+EFK +V++YTL PGM + V HV RN+P FVFP
Sbjct: 425 NFMALQRKQGVPVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVFP 484
Query: 449 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 508
G VRPS PSK TW+ +++ E K++ GA+D RKRKQ +D+VD+ LRN+K A++P S
Sbjct: 485 GSVRPSHPSKVTWEIKKSQEGKMAVL---GANDDRKRKQAEDSVDS-LRNSKSMASLPPS 540
Query: 509 SGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHN 568
S E E +S SS + + + N + EK + + G R + + N
Sbjct: 541 SREVHEDENPISPASSCFV--KSNDSEINSTSEQQSEKPDLKSSGECPGDRETNGSVTSN 598
Query: 569 GKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKN 628
+V+ + ++S+SK+AEKLAIEKIM GPY A Q F E D+LEDDLE +N
Sbjct: 599 LQVNAALTAT--------DTSSSKEAEKLAIEKIMCGPYDAQQVFSGEPDELEDDLEFRN 650
Query: 629 QAKDFAGSTQNN 640
Q KDF G +N+
Sbjct: 651 QVKDFGGKMKNS 662
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/491 (73%), Positives = 404/491 (82%), Gaps = 38/491 (7%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
SNGQ LG+TEPISL GP++ D ++T +LEK+L LYESQEEAV REEVLGRLDQ
Sbjct: 11 SNGQYLGVTEPISLGGPSEFDYIKTAELEKFLVSAGLYESQEEAVRREEVLGRLDQIVKV 70
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPGADIDTLCVGPRHATREEDFF EL
Sbjct: 71 WVRKISRNKGFGEQVVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFFIEL 130
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++ML +MPEVTELHPVPDAHVPVMKFKF+G+SIDLLYA+LSLWVIPEDLDISQDSIL+NA
Sbjct: 131 YEMLADMPEVTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDLDISQDSILRNA 190
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DEQTVRSLNGCRVTDQILRLVP IQNFRTTLRCM+ WAKRRGVYSNVAGFLGG+NWALLV
Sbjct: 191 DEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGVNWALLV 250
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA+PSMLV RFFRVYTQWRWPNPV+LCAIEEG LGL VWDPR+NP+D+ H M
Sbjct: 251 ARICQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQM 310
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYPCMNSSYNVS+STLR+M +EFQR ++ICE +E N+ V W+ LFE + FFEAY
Sbjct: 311 PIITPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNK--VCWNILFETYPFFEAY 368
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 387
KNYL IDISAE ADDLR WKGW ESRLR LTLKIER T+ MLQCHPHP DFSD +P +C
Sbjct: 369 KNYLEIDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRPYHC 428
Query: 388 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 447
+FMGLQRKQG+P+ EGEQFDIR+TV EF+ +V MYTL K GM+I+V+H+ RRN+P FVF
Sbjct: 429 CFFMGLQRKQGMPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVF 488
Query: 448 PGGVRPSRPSK 458
PGGVRP R +K
Sbjct: 489 PGGVRPPRTTK 499
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/709 (57%), Positives = 473/709 (66%), Gaps = 86/709 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG++EPIS AGPT+ DL++TR+LEK+L D LYE++EEA+ REEVLGR+DQ
Sbjct: 15 LGVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTV 74
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPGADIDTLCVGPRHATR+EDFFGELH+ML
Sbjct: 75 SRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLA 134
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E PEV ELHPVPDAHVPVMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DEQTV
Sbjct: 135 ETPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTV 194
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQ
Sbjct: 195 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 254
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAVPS LVSRFFRVYTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPIITP
Sbjct: 255 LYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITP 314
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP MNSSYNVS STLRIM +E QRG+EI + ME + W TLFEPF FFEAYKNYL+
Sbjct: 315 AYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKNYLQ 372
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 392
IDI+AEN DLRNWKGWVESRLR LT KIER T MLQCHPHP +FSD S+ + YFMG
Sbjct: 373 IDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCYFMG 432
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
L+RK+G EGEQFDIRLTV +FK V MY+ K GM I V H+ R+N+PNFVFPGGVR
Sbjct: 433 LRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVR 492
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF 512
P +P K + + +KP + +KRK+ + + +H
Sbjct: 493 PPQPMKVAGEQGQV--------SKPMGFNSQKRKRDEIDAGSHP---------------- 528
Query: 513 REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNG-KV 571
RE + ++ + S +LQ E E+VE N+ DS+ S E SSHN ++
Sbjct: 529 RESTSLVENVES---DLQGE---------VKLEQVEVNVGDSLTKVICSSENSSHNSIEL 576
Query: 572 DGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAK 631
+G S S + L IE S P V Q E+ E + L +Q +
Sbjct: 577 EGYARCSQPLGAASSASGSLSLGRALVIETT-SEPLV-HQCSSKEVG--ESQVGLVDQVQ 632
Query: 632 DFAGSTQNNSLGSCAVNIAAEATLTSMNGG---SSSSALSPNGGLGELE 677
+F + N C + AE + + G S S+L NGGL ELE
Sbjct: 633 NFDVGKRVN----CVQSSTAERGMAAAAAGQGFSPCSSLFQNGGLEELE 677
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/527 (68%), Positives = 405/527 (76%), Gaps = 46/527 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG++EPIS AGPT+ DL++TR+LEK+L D LYE++EEA+ REEVLGR+DQ
Sbjct: 15 LGVSEPISTAGPTEFDLIKTRELEKFLADSGLYETREEAIRREEVLGRVDQIVKVWVKTV 74
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPGADIDTLCVGPRHATR+EDFFGELH+ML
Sbjct: 75 SRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELHRMLA 134
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E PEV ELHPVPDAHVPVMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DEQTV
Sbjct: 135 ETPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDEQTV 194
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVARICQ
Sbjct: 195 RSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQ 254
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAVPS LVSRFFRVYTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPIITP
Sbjct: 255 LYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITP 314
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP MNSSYNVS STLRIM +E QRG+EI + ME + W TLFEPF FFEAYKNYL+
Sbjct: 315 AYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKNYLQ 372
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 392
IDI+AEN DLRNWKGWVESRLR LT KIER T MLQCHPHP +FSD S+ + YFMG
Sbjct: 373 IDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCYFMG 432
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
L+RK+G EGEQFDIRLTV +FK V MY+ K GM I V H+ R+N+PNFVFPGGVR
Sbjct: 433 LRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVR 492
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNA 499
P +P K + + +KP + +KRK+ + + +H R +
Sbjct: 493 PPQPMKVAGEQGQV--------SKPMGFNSQKRKRDEIDAGSHPRES 531
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/498 (68%), Positives = 396/498 (79%), Gaps = 40/498 (8%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M SNG++ LG+TEPIS AGPT+ D RTR LEK L + LYES EEAV REEVLGRLDQ
Sbjct: 1 MAQSNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQ 60
Query: 60 ------------------------------------VHGPGADIDTLCVGPRHATREEDF 83
VHGPG DIDTLCVGPRH +REEDF
Sbjct: 61 LVKEWVKNICLRKGYSEQVTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDF 120
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
FG H ML M EVTELHPVPDAHVPVM+FKFSG+SIDLLYA L++W IPEDLDISQ+SI
Sbjct: 121 FGVFHGMLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESI 180
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+N DE +VRSLNGCRVTDQILRLVP I++FRTTLRCM+ WA++RGVYSNV GFLGG+NW
Sbjct: 181 LRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNW 240
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
ALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+
Sbjct: 241 ALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDR 300
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
H MPIITPAYPCMNSSYNVS+STLR+M++EF R + ICE +E N+A +W LFEP+ F
Sbjct: 301 THQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKA--EWSALFEPYAF 358
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK 383
F+AYKNYL+ID+ A + DDLR WKGWVESRLRQLTLKIE+HTY MLQCHPHP DF D+SK
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESK 418
Query: 384 P-LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 442
+C++FMGLQ++QG+P EG+QFDIRLTV+EF+Q+V+ Y L K GM I+V+HV RR +
Sbjct: 419 EGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQI 478
Query: 443 PNFVFPGGVRPSRPSKGT 460
P +VFPGG +P+RP K T
Sbjct: 479 PAYVFPGGTKPARPPKVT 496
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/512 (66%), Positives = 401/512 (78%), Gaps = 47/512 (9%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M SNG++ LG+TEPIS AGPT+ D RTR LEK L + LYES EEAV REEVLGRLDQ
Sbjct: 1 MAQSNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQ 60
Query: 60 ------------------------------------VHGPGADIDTLCVGPRHATREEDF 83
VHGPG DIDTLCVGPRH +REEDF
Sbjct: 61 LVKEWVKNICLRKGYSEQLTQEANAKIFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDF 120
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
FG H ML M EVTELHPVPDAHVPVM+FKFSG+SIDLLYA L++W IPEDLDISQ+SI
Sbjct: 121 FGVFHGMLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESI 180
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+N DE +VRSLNGCRVTDQILRLVP I++FRTTLRCM+ WA++RGVYSNV GFLGG+NW
Sbjct: 181 LRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNW 240
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
ALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+
Sbjct: 241 ALLVARICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDR 300
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
H MPIITPAYPCMNSSYNVS+STLR+M++EF R + ICE +E N+A +W LFEP+ F
Sbjct: 301 THQMPIITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKA--EWSALFEPYAF 358
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK------IERHTYNMLQCHPHPGD 377
F+AYKNYL+ID+ A + DDLR WKGWVESRLRQLTLK IE+HTY MLQCHPHP D
Sbjct: 359 FDAYKNYLQIDVFAADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCD 418
Query: 378 FSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAH 436
F D+SK +C++FMGLQ++QG+P EG+QFDIRLTV+EF+Q+V+ Y L K GM I+V+H
Sbjct: 419 FVDESKEGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSH 478
Query: 437 VTRRNLPNFVFPGGVRPSRPSKGTWDSRRALE 468
V RR +P +VFPGG +P+RP K + SR+A E
Sbjct: 479 VRRRQIPAYVFPGGTKPARPPKLS-SSRKARE 509
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/492 (65%), Positives = 390/492 (79%), Gaps = 5/492 (1%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPGA 65
++ G+T+PIS AGPT+ D+ RTR+LEK L D LYES++EAV REEVL R+DQVHGPGA
Sbjct: 14 AKQYGVTKPISTAGPTEADIQRTRELEKLLGDSGLYESKDEAVKREEVLARIDQVHGPGA 73
Query: 66 DIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYA 125
DIDTLCVGP + REEDFF LH +L EM EVTEL PVPDAHVPVM+FKF G+SIDLLYA
Sbjct: 74 DIDTLCVGPSYVNREEDFFFVLHNILAEMEEVTELQPVPDAHVPVMRFKFDGISIDLLYA 133
Query: 126 RLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWA 185
+SL V+PEDLDIS S+L + DE TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWA
Sbjct: 134 SISLLVVPEDLDISDVSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWA 193
Query: 186 KRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE 245
KRRGVYSNV GFLGG+NWALLVARICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IE
Sbjct: 194 KRRGVYSNVTGFLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIE 253
Query: 246 EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM 305
E LG +WDPR+NP+D+ H MPIITPAYPCMNSSYNVSTSTLR+MM++FQ G++ICE +
Sbjct: 254 EDELGFSIWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEI 313
Query: 306 EKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 365
E W TLFEP+ FFE+YKNYL++DI A + DDLR WKGWVESRLRQLTL I+R T
Sbjct: 314 EL--IKTQWATLFEPYLFFESYKNYLQVDIVATDVDDLRAWKGWVESRLRQLTLMIDRDT 371
Query: 366 YNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 424
Y LQCHP+P ++ D SKP +C++FMGLQRKQG + EG+QFDIR TV EF+ +++MY
Sbjct: 372 YGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYM 431
Query: 425 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDG 482
KPGM+I V+HV R+ +P++VFP G R +R + T S + ++ ++ G
Sbjct: 432 FWKPGMEIYVSHVRRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERG 491
Query: 483 RKRKQTDDNVDT 494
KRK+ D +D
Sbjct: 492 HKRKKDSDEIDV 503
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/712 (52%), Positives = 455/712 (63%), Gaps = 79/712 (11%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M SN LG++EPISL+GPT+ D+M+T ++EK+L D LYESQEEAVSREEVLG+LDQ
Sbjct: 22 MAKSNTGYLGVSEPISLSGPTEKDVMQTTEVEKFLADAGLYESQEEAVSREEVLGKLDQT 81
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPGADIDTLCVGPRHATR + FF
Sbjct: 82 VKTWIKKATRASGYGEQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFF 141
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
LH ML EMPEV+ELHPVPDAHVPV+ FK GVSIDLLYA L+ VIPEDLD+SQDSIL
Sbjct: 142 RCLHDMLAEMPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSIL 201
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
N DEQ VRSLNGCRVTDQILRLVP I +FRTTLR MR+W KRRGVYSNV GFLGGINWA
Sbjct: 202 HNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWA 261
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEEG LGL VWDPRRN +D+
Sbjct: 262 ILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRG 321
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYPCMNSSYNVS ST +M+ EF RG+EIC+A+++N A WD LFEP+ FF
Sbjct: 322 HQMPIITPAYPCMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRA--TWDDLFEPYPFF 379
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
E Y+NYL + ISA N DDLRNWKGWVESRLR L LK ER+T+ ML HPHP DFSD S+P
Sbjct: 380 ELYRNYLEVVISARNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRP 439
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
L+ YFMGL RKQ V E EQFDIR V EFK +V Y R GM I V+HV R+++P
Sbjct: 440 LHSFYFMGLWRKQTVQPQEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPL 499
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
FVFPGGVRP R S+ + A+ R S G + + T
Sbjct: 500 FVFPGGVRPPRSSRTAGRNGHAVSRNDVSADADGQVGNPLVTEGWSDPPTQ--------- 550
Query: 505 MPSSSGEFREGSPIMSTISSSSINLQFEHM---DAN------------ELAGSNREKVEN 549
PS+ + E + +++ ++S N + +H+ D+N GS V+N
Sbjct: 551 GPSAGYQLPENTSLLANLASRLSNNETQHILNGDSNLHTESVEHEHPVRFLGSTSAPVDN 610
Query: 550 NLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIM-SGPYV 608
+ D I+ NS+ +S NG GP G G+SFNSS+ K+++ + + ++ S P
Sbjct: 611 AVLDVIKPP-NSIPSTSSNG---GPTNG----LGISFNSSH-KESKGIHVNNLVTSSPTT 661
Query: 609 ADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNG 660
D L Q + D K A + + L C+ +A S +G
Sbjct: 662 TDGLDELVWPQAKSD-------KIHANTAHVSPLEGCSGTSLGQAVNLSSHG 706
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/516 (65%), Positives = 390/516 (75%), Gaps = 46/516 (8%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------- 59
EP+S AGPT DL RTR LEK L + L ES+EEA+ RE VLGRLDQ
Sbjct: 2 EPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNK 61
Query: 60 -----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
VHGPG+DIDTLCVGP HATREEDFF ELH +L E
Sbjct: 62 GFSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETEN 121
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
VTEL+PVP+AHVPVMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DEQ+V SLN
Sbjct: 122 VTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLN 181
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
GCRVTDQILRLVP IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVARICQLYPN
Sbjct: 182 GCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPN 241
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLMPIITPAY 274
AVPS LVSRFFRVYTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLMPIITPAY
Sbjct: 242 AVPSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301
Query: 275 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 334
PCMNSSYNVSTSTLRIM EF RG+E+CE +E + A WD LFE F+FFEAY+NYL+ID
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAYRNYLQID 359
Query: 335 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY-CSYFMGL 393
+ A + D R WKGWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y C+YFMGL
Sbjct: 360 VVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGL 419
Query: 394 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
QRK G P+ EG+QFDIR TV++FK V+ YT KPGM+I V+HV R+ +P FV+PGGV+P
Sbjct: 420 QRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFVYPGGVKP 479
Query: 454 SRPSKG-----TWDSRRALERKVSSHTKPGADDGRK 484
+RP++ + DS++ RK + PG +K
Sbjct: 480 ARPARQHSGSPSSDSKQGDSRKRLTSADPGGHCSKK 515
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/507 (65%), Positives = 378/507 (74%), Gaps = 38/507 (7%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M SN LG++EPISL+GPT+ D+++T ++EK+L D LYESQEEAVSREEVLG+LDQ
Sbjct: 1 MAKSNTGYLGVSEPISLSGPTEKDVVQTAEVEKFLADAGLYESQEEAVSREEVLGKLDQT 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPGADIDTLCVGPRHATR + FF
Sbjct: 61 VKTWIKKATRVSGYGDQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNDYFF 120
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
LH ML EMPEV+ELHPVPDAHVPV+ FK GVSIDLLYA L+ VIP+DLD+SQDSIL
Sbjct: 121 RCLHDMLAEMPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSIL 180
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
N DEQ VRSLNGCRVTDQILRLVP I +FRTTLR MR+W KRRGVYSNV GFLGGINWA
Sbjct: 181 HNVDEQAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWA 240
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEEG LGL VWDPRRN +D+
Sbjct: 241 ILVARICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRG 300
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYPCMNSSYNVSTST +M+ EF RG+EIC+A+++N A WD LFEP+ FF
Sbjct: 301 HQMPIITPAYPCMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRA--TWDDLFEPYPFF 358
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
E YKNYL + I+A + DDLRNWKGWVESRLR L LK ER+T+ ML HPHP DFSD S+P
Sbjct: 359 ELYKNYLEVGITARSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRP 418
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
L+ YFMGL RKQ E EQFDIR V EFK AV Y R+ GM I V+HV R+++P
Sbjct: 419 LHSFYFMGLWRKQTAQPQEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPL 478
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKV 471
FVFPGGVRP R S+ S R + R V
Sbjct: 479 FVFPGGVRPPRSSRTAARSSRTVSRNV 505
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/543 (61%), Positives = 386/543 (71%), Gaps = 52/543 (9%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
+N LG+TEPISL+GPTD DLM+T ++EKYL D LYESQ+EAV REEVLG+LDQ
Sbjct: 4 AKTNNGYLGVTEPISLSGPTDKDLMQTTEVEKYLSDAGLYESQDEAVLREEVLGKLDQTV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFR 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
LH ML EMPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL
Sbjct: 124 WLHDMLAEMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILN 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N DEQTVRSLNGCRVTDQILRLVP I +FRTTLR +R+W KRRGVYSNV GFLGGINWA+
Sbjct: 184 NVDEQTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAI 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LV RICQLYPNA PSML+SRFFRVY++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H
Sbjct: 244 LVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYPCMNSSYNVS ST +M EF R EIC+A+++ +A DWD LFEP+ FFE
Sbjct: 304 QMPIITPAYPCMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKA--DWDALFEPYPFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
+YKNYL ++I+A N D+LR+WKGWVESRLR L LKIER+++ M+ HP+P DFSDKS+PL
Sbjct: 362 SYKNYLEVNITARNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL 421
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+C YFMGL RKQ E EQFDIR V EFK + Y K GM I V+HV R+ +P F
Sbjct: 422 HCFYFMGLWRKQTTQTQEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLF 481
Query: 446 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM 505
VFPGGVRPSR S+ + R T P D DD V L A C
Sbjct: 482 VFPGGVRPSRSSRTAHKNSR---------TVPTCD-----VSADDQVGNLLGVASCSDAQ 527
Query: 506 PSS 508
P S
Sbjct: 528 PVS 530
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/516 (65%), Positives = 389/516 (75%), Gaps = 46/516 (8%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------- 59
EP+S AGPT DL RTR LEK L + L ES+EEA+ RE VLGRLDQ
Sbjct: 2 EPLSTAGPTPADLGRTRDLEKLLSNAGLNESREEAMKREGVLGRLDQIVKSWVRQICVNK 61
Query: 60 -----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
VHGPG+DIDTLCVGP HATREEDFF ELH +L E
Sbjct: 62 GFSNEVVQEANAKIFTFGSYRLGVHGPGSDIDTLCVGPSHATREEDFFVELHNILAETEN 121
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
VTEL+PVP+AHVPVMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DEQ+V SLN
Sbjct: 122 VTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDEQSVLSLN 181
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
GCRVTDQILRLVP IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVARICQLYPN
Sbjct: 182 GCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVARICQLYPN 241
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLMPIITPAY 274
AVPS L+SRFFRVYTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLMPIITPAY
Sbjct: 242 AVPSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAY 301
Query: 275 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 334
PCMNSSYNVSTSTLRIM EF RG+E+CE +E + A WD LFE F+FFEAY+NYL+ID
Sbjct: 302 PCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAYRNYLQID 359
Query: 335 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY-CSYFMGL 393
+ A + D R WKGWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y C+YFMGL
Sbjct: 360 VVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGL 419
Query: 394 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
QRK G P+ EG+QFDIR TV++FK V+ YT K GM+I V+HV R+ +P FV+PGGV+P
Sbjct: 420 QRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFVYPGGVKP 479
Query: 454 SRPSKG-----TWDSRRALERKVSSHTKPGADDGRK 484
+RP++ + DS++ RK + PG +K
Sbjct: 480 ARPARQHSGSPSSDSKQGDSRKRLTSADPGGHCSKK 515
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/504 (65%), Positives = 383/504 (75%), Gaps = 39/504 (7%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQ
Sbjct: 25 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 84
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGPRHATR E FF
Sbjct: 85 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 144
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 145 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 204
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWAL
Sbjct: 205 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWAL 264
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 265 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 324
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE
Sbjct: 325 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFE 382
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 383 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 442
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 443 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 502
Query: 446 VFPGGVRPSRPSKGTWDSRRALER 469
VFPGG+RPSRPS+ RA+ R
Sbjct: 503 VFPGGIRPSRPSRTVGKEARAVSR 526
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/504 (65%), Positives = 383/504 (75%), Gaps = 39/504 (7%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQ
Sbjct: 4 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 124 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWAL
Sbjct: 184 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 244 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE
Sbjct: 304 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 362 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 421
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 422 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 481
Query: 446 VFPGGVRPSRPSKGTWDSRRALER 469
VFPGG+RPSRPS+ RA+ R
Sbjct: 482 VFPGGIRPSRPSRTVGKEARAVSR 505
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/504 (65%), Positives = 383/504 (75%), Gaps = 39/504 (7%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQ
Sbjct: 4 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 124 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWAL
Sbjct: 184 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 244 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE
Sbjct: 304 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 362 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 421
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 422 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 481
Query: 446 VFPGGVRPSRPSKGTWDSRRALER 469
VFPGG+RPSRPS+ RA+ R
Sbjct: 482 VFPGGIRPSRPSRTVGKEARAVSR 505
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/504 (64%), Positives = 382/504 (75%), Gaps = 39/504 (7%)
Query: 3 SSNGQ-RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
S+NG LG+TEPISL+GPT+ D++RT+++EK L D LYESQEEAVSREEVLG+LDQ
Sbjct: 4 SNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGPRHATR E FF
Sbjct: 64 KAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQ 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
L+ ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL
Sbjct: 124 ALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILH 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N DEQTVRSLNGCRVTD+ILRLVP I FRTTLR +RFWAKRRGVYSNV GFLGGINWAL
Sbjct: 184 NVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVARICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H
Sbjct: 244 LVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ EA DWD LFEP+ FFE
Sbjct: 304 HMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDEREA--DWDALFEPYPFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
+Y+NYL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL
Sbjct: 362 SYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL 421
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+C YFMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+F
Sbjct: 422 HCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSF 481
Query: 446 VFPGGVRPSRPSKGTWDSRRALER 469
VFPG +RPSRPS+ RA+ R
Sbjct: 482 VFPGRIRPSRPSRTVGKEARAVSR 505
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 423/612 (69%), Gaps = 81/612 (13%)
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADE
Sbjct: 1 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 60
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 61 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 120
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
ICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPI
Sbjct: 121 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 180
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+A DWDTLFEPF FFEAYKN
Sbjct: 181 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYKN 238
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 389
YL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CSY
Sbjct: 239 YLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSY 297
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFPG
Sbjct: 298 FMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPG 357
Query: 450 GVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTDD 490
GVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 358 GVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGDS 417
Query: 491 NVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVE 548
T RN+K A ++P + E +P + +I SS +
Sbjct: 418 ETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPM--------------------- 456
Query: 549 NNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGPY 607
+ NGK + P+ DP ++F SKD E L IEKI +
Sbjct: 457 --------------KDYCTNGKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT--- 494
Query: 608 VADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSAL 667
QA E ++LE+ + NQ + + ++A AT+ S+ S
Sbjct: 495 --PQAH--ETEELEESFDFGNQVIE--------QISHKVAVLSATATIPPFEATSNGSPF 542
Query: 668 SPNGGLGELEVL 679
P + ELEVL
Sbjct: 543 -PYEAVEELEVL 553
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/506 (64%), Positives = 380/506 (75%), Gaps = 39/506 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+TEPISL+GPT+ DLM+T ++EKYL D LYE Q+EA+ REEVLG+LDQ
Sbjct: 12 GVTEPISLSGPTEKDLMQTAEVEKYLSDAGLYERQDEAILREEVLGKLDQTVKAWIKKAT 71
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGPRHATR E FF LH +L E
Sbjct: 72 RISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEYFFRWLHDILAE 131
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
MPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL N DEQTVR
Sbjct: 132 MPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDEQTVR 191
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTDQILRLVP I +FRTTLR +R W KRRGVYSNV GFLGGINWA+LV RICQL
Sbjct: 192 SLNGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGRICQL 251
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA PSML+SRFFRVY++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H MPIITPA
Sbjct: 252 YPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPA 311
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS ST +M+ EF + EIC+A+++ +A DWD LFEP+ FFE+YKNYL +
Sbjct: 312 YPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKA--DWDALFEPYPFFESYKNYLEV 369
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 393
+I+A N DDLRNWKGWVESRLR L LKIER+++ M+ HP+P DFSDKS+PL+ YFMGL
Sbjct: 370 NITARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPLHIFYFMGL 429
Query: 394 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
RKQ E EQFDIR V EFK + Y RK GM I V+HV R+ +P FVFPGGVRP
Sbjct: 430 WRKQTTQAQETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVRP 489
Query: 454 SRPSKGTWDSRRAL-ERKVSSHTKPG 478
SR S+ T + RA+ R VS+ + G
Sbjct: 490 SRTSRTTHKNSRAIPTRDVSADDQVG 515
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/491 (63%), Positives = 381/491 (77%), Gaps = 39/491 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT+PISL+GP+ DL R+R+LE++L LYES+EE+ REEVL ++DQ
Sbjct: 18 RQYGITKPISLSGPSGSDLQRSRELEEFLVSAGLYESEEESALREEVLAQIDQIVKQWVK 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP +A +EEDFF LH M
Sbjct: 78 QLTREKGYTEQMVEESNAKVFTFGSYRLGVHGPGADIDTLCVGPEYADQEEDFFILLHDM 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EMPEV EL+ VPDAHVPVMKFKF G+SIDLLYA ++L ++P+DLDISQ+S+L N DEQ
Sbjct: 138 LAEMPEVMELNRVPDAHVPVMKFKFRGISIDLLYASVALRIVPDDLDISQESVLYNVDEQ 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV +QILRLVP +++FRTTLRCM+FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWALLVARV 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+PSMLVSRFFRV+TQWRWPNPV+L +I+E LG VWDPR+NP+D+ H MPII
Sbjct: 258 CQLYPNAIPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP MNSSYNVSTSTLR+M ++FQ+G+++CE +E N+A +W LF+P+ FFEAYKNY
Sbjct: 318 TPAYPGMNSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKA--NWSALFDPYPFFEAYKNY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L++DI A + DDLR WKGWVESRLRQLTLKIER T+ MLQCHP+P ++ D SK +C++
Sbjct: 376 LQVDIVAADQDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCAF 435
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGLQRKQGV + EG+QFDIR TV EF+Q+V MY KPGM I V+HV R+ +P++VFP
Sbjct: 436 FMGLQRKQGVLIQEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYVFPE 495
Query: 450 GVRPSRPSKGT 460
GVR R +
Sbjct: 496 GVRRVRSGRAA 506
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/560 (59%), Positives = 406/560 (72%), Gaps = 41/560 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+R GIT+PISLAGP++ DL+R L K+L D LYES+EE + REEVL R+DQ
Sbjct: 25 KRYGITKPISLAGPSEADLLRNADLVKFLVDSGLYESKEENLKREEVLCRIDQIVKDWIK 84
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 85 QLTRQRGYSDQMVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHDI 144
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EM E+TEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DEQ
Sbjct: 145 LAEMDEITELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDEQ 204
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 205 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARL 264
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPRRNP+D++H MPII
Sbjct: 265 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPII 324
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E N+A W LFEP+ FFEAYKNY
Sbjct: 325 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKA--QWSALFEPYLFFEAYKNY 382
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L+IDI A +ADDL WKGWVESRLRQLTLKIER T MLQCHP+P ++ D SK +C++
Sbjct: 383 LQIDIIAADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAF 442
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGLQR++GV EG+QFDIR TV+EF+Q ++MY KPGM + V+H RR LP FVFP
Sbjct: 443 FMGLQRRKGVSGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPD 502
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSS 509
G + SR S+ + + VS+ ++ G+ +G +++ D V +R K S
Sbjct: 503 GYKRSRTSRHP-NQQAGKPSDVSATSRAGSVEGHLKRKNDHEV-VDVRPDKPEKRASVSP 560
Query: 510 GEFREGSPIMSTISSSSINL 529
+ SP +TISS +L
Sbjct: 561 QRLQSVSPESNTISSGRTSL 580
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/484 (64%), Positives = 373/484 (77%), Gaps = 40/484 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T+PISLAGP D D+ R +LEK+L D LYES+EEA REEVLGR+DQ
Sbjct: 21 GVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLT 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPG+DIDTLCVGP + RE DFF LH +L E
Sbjct: 81 LLRGYTEQMVEDANAVIFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILHNILAE 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVT+L PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DEQTVR
Sbjct: 140 MEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA++CQL
Sbjct: 200 SLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPIITPA
Sbjct: 260 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVSTSTLR+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKNYL++
Sbjct: 320 YPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKNYLQV 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
DI A +ADDL WKGWVESR RQLTLKIER T MLQCHP+P ++SD SKP +C++FMG
Sbjct: 378 DIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMG 437
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQRK+G+ G+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G +
Sbjct: 438 LQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHK 497
Query: 453 PSRP 456
++P
Sbjct: 498 RAKP 501
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/542 (58%), Positives = 395/542 (72%), Gaps = 41/542 (7%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQ
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKT--SWPALFEPFQFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 386 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 505 MP 506
P
Sbjct: 540 SP 541
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/489 (62%), Positives = 374/489 (76%), Gaps = 39/489 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ G+T+PIS+AGPT+ D+ R+ +LEK+L D LYES+EEA+ R EVL RL Q
Sbjct: 17 KQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVK 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPG DIDTLC+GP + +REEDFF LH +
Sbjct: 77 QLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNI 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 137 LADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEP 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 197 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPII
Sbjct: 257 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNY
Sbjct: 317 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++
Sbjct: 375 LQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAF 434
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 435 FMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPE 494
Query: 450 GVRPSRPSK 458
G + SRP +
Sbjct: 495 GYKRSRPQR 503
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/542 (58%), Positives = 395/542 (72%), Gaps = 41/542 (7%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQ
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKT--SWPALFEPFQFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 386 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 505 MP 506
P
Sbjct: 540 SP 541
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/542 (58%), Positives = 395/542 (72%), Gaps = 41/542 (7%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQ
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKT--SWPALFEPFQFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 386 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 505 MP 506
P
Sbjct: 540 SP 541
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/486 (64%), Positives = 374/486 (76%), Gaps = 40/486 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T+PISLAGP D D+ R +LEK+L D LYES+EEA REEVLGR+DQ
Sbjct: 21 GVTKPISLAGPMDADIHRNIELEKFLVDSELYESKEEAAKREEVLGRIDQIVKSWVKQLT 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPG+DIDTLCVGP + RE DFF LH +L E
Sbjct: 81 LLRGYTEQMVEDANAVXFTFGSYRLGVHGPGSDIDTLCVGPSYVNRE-DFFIILHNILAE 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVT+L PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DEQTVR
Sbjct: 140 MEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDEQTVR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA++CQL
Sbjct: 200 SLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQVCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPIITPA
Sbjct: 260 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVSTSTLR+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKNYL++
Sbjct: 320 YPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKNYLQV 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
DI A +ADDL WKGWVESR RQLTLKIER T MLQCHP+P ++SD SKP +C++FMG
Sbjct: 378 DIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMG 437
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQRK+G+ G+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G +
Sbjct: 438 LQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHK 497
Query: 453 PSRPSK 458
++P +
Sbjct: 498 RAKPLR 503
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/587 (55%), Positives = 409/587 (69%), Gaps = 54/587 (9%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------- 59
+P+SLAGP D D+ RT +L K+L + LYES E+ REEVLG LD+
Sbjct: 6 KPLSLAGPVDADIQRTAELNKFLVEAGLYESAHESARREEVLGELDKIVKDWVKQLTSQR 65
Query: 60 -----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
VHGPGAD+DTLCVGP + REEDFF LH +L + E
Sbjct: 66 GYTDQMVEDANAVLFTFGSYRLGVHGPGADVDTLCVGPSYVNREEDFFIVLHDILAQTEE 125
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ+S+L + DE TVRSLN
Sbjct: 126 VTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDEATVRSLN 185
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
GCRV DQILRLVP I+NFRTTLRC++ WAKRRGVYSNV GFLGG+NWALLVAR+CQLYPN
Sbjct: 186 GCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPN 245
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
AVPSMLVSRFFRV+TQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPC
Sbjct: 246 AVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPC 305
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 336
MNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A +W LFE F FFEAYKNYL++DI
Sbjct: 306 MNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKA--NWPALFESFQFFEAYKNYLQVDII 363
Query: 337 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQR 395
AE+ +DLR WKGWVESRLRQLTLKIER TY LQCHP+P +++D S+ +C++FMGL R
Sbjct: 364 AEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSR 423
Query: 396 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 455
GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G R R
Sbjct: 424 NVGVKIEEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPR 483
Query: 456 PSKGTWDSRRALERKVSSHTKPGADDGR-KRKQTDDNVDTHLRNAKCHATMPSSSGEFRE 514
P + +++ + + G+ DG+ KRK D C + +S
Sbjct: 484 PQRHVSHQQQSDKNDTENGNMTGSPDGQLKRKHDSAGTDD---TEPCRSVKRASRASVSP 540
Query: 515 GSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
P S+ SS +I ++E +N++K+ +N + GS+NS
Sbjct: 541 VHPTTSSPSSGNI--------SDEATCNNQKKMSSNASG---GSQNS 576
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/542 (58%), Positives = 395/542 (72%), Gaps = 41/542 (7%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQ
Sbjct: 4 GSDAPKQYGITKPLSLLGPVEADLQRTEELEKFLLESGLYESPDESARREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
+ DE TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 386 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
+C++FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P
Sbjct: 422 AHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPA 481
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
+VFP G + RPS+ + ++ + T + D + +++ D +R AK +T
Sbjct: 482 YVFPEGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSST 539
Query: 505 MP 506
P
Sbjct: 540 SP 541
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/489 (62%), Positives = 374/489 (76%), Gaps = 39/489 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ G+T+PIS+AGPT+ D+ R+ +LEK+L D LYES+EEA+ R EVL RL Q
Sbjct: 17 KQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKRAEVLDRLGQIVKDWVK 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPG DIDTLC+GP + +REEDFF LH +
Sbjct: 77 QLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNI 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 137 LADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEP 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 197 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPII
Sbjct: 257 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNY
Sbjct: 317 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++
Sbjct: 375 LQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAF 434
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 435 FMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPE 494
Query: 450 GVRPSRPSK 458
G + SRP +
Sbjct: 495 GYKRSRPQR 503
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/602 (54%), Positives = 412/602 (68%), Gaps = 48/602 (7%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
+ G T+P+SLAGPTD DL R L+K+L D LYES EE+ +R+EVL RLDQ
Sbjct: 23 KYGFTKPLSLAGPTDADLQRNNDLDKFLLDSGLYESNEESAARKEVLHRLDQIVKSWVKQ 82
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
VHGPG DIDTLC+GP + REEDFF LH +L
Sbjct: 83 LTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFIILHNIL 142
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 151
EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE T
Sbjct: 143 AEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPT 202
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
VRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWA+LVARIC
Sbjct: 203 VRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARIC 262
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPIIT
Sbjct: 263 QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIIT 322
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYPCMNSSYNVS STLR+M+D+F G++IC+ +E N+A W LF+P+ FFEAYKNYL
Sbjct: 323 PAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKA--QWSALFQPYIFFEAYKNYL 380
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYF 390
++DI A + DDL W+GWVESRLR LTLKIER T MLQCHP+P ++ D SKP + ++F
Sbjct: 381 QVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFF 440
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 450
MGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP G
Sbjct: 441 MGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPDG 500
Query: 451 VRPSR-PSKGTWDSRRALERKVSSHTKPG-ADDGRKRKQTDDNVDTHLRNAKCHATMPSS 508
+ +R P + + + + ++ PG ++ KRK + VD A++ S
Sbjct: 501 YKRTRMPRHISHQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPDKRASI--S 558
Query: 509 SGEFREGSPIMST-ISSSSINLQFEHMDANELAGSNREKVENNL----TDSIRGSRNSVE 563
SP T S + + E + LAGS + +N +D++ GS E
Sbjct: 559 PQRLECVSPESCTGKSGGTAQMSIECIKGVRLAGSTTKDANSNCKIKSSDALPGSGLRTE 618
Query: 564 VS 565
V+
Sbjct: 619 VA 620
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/514 (60%), Positives = 376/514 (73%), Gaps = 39/514 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T+PIS+AGP D D+ R ++LEK+L D LYES+EE+ REEVL R+ Q
Sbjct: 27 GVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLT 86
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 87 RIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEE 146
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EV+EL PVPDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE TVR
Sbjct: 147 MEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVR 206
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP +++FRT LRC++FWAKRRGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 207 SLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQL 266
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAVPSML+SRFFRVYT WRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPIITPA
Sbjct: 267 YPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPA 326
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVSTSTLR+MM++FQ G+++CE +E N+A W +LFEP+ FFE+YKNYL++
Sbjct: 327 YPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKA--QWSSLFEPYLFFESYKNYLQV 384
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
DI A +ADDLR+WKGWVESR R LTL IER T LQCHP+P ++ D SKP +C++FMG
Sbjct: 385 DIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMG 444
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQRKQG + EG+QFDIR +V EFK S Y KPGM+I V+HV RR +P FVFP G +
Sbjct: 445 LQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHK 504
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRK 486
R S+ + R + V + + KRK
Sbjct: 505 RFRASRLSALQRSPNQEDVQNGRSGSCERDLKRK 538
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/520 (59%), Positives = 389/520 (74%), Gaps = 39/520 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARV 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPII
Sbjct: 258 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNY
Sbjct: 318 TPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 489
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 496 GYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/520 (59%), Positives = 389/520 (74%), Gaps = 39/520 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+
Sbjct: 18 KQFGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARV 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPII
Sbjct: 258 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNY
Sbjct: 318 TPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 489
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 496 GYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/520 (59%), Positives = 389/520 (74%), Gaps = 39/520 (7%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+
Sbjct: 198 TVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARV 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPII
Sbjct: 258 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKNY
Sbjct: 318 TPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKNY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++
Sbjct: 376 LQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAF 435
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 436 FMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPE 495
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 489
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 496 GYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/625 (53%), Positives = 413/625 (66%), Gaps = 74/625 (11%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
+ T+P+SLAGPTD DL R +L+K+L D LYES EE+ +R+EVL RLDQ
Sbjct: 22 KYAFTKPLSLAGPTDADLQRNNELDKFLLDSGLYESNEESAARKEVLHRLDQIVKNWVKQ 81
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
VHGPG DIDTLC+GP + REEDFF LH +L
Sbjct: 82 LTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLCIGPSYVNREEDFFVILHNIL 141
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 151
EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE T
Sbjct: 142 AEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDEPT 201
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
VRSLNGCRV DQIL+LVP +++FRT LRC++FWAKRRGVYSNV GFLGG+NWA+LVARIC
Sbjct: 202 VRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGVNWAILVARIC 261
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPIIT
Sbjct: 262 QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIIT 321
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYPCMNSSYNVS STLR+MM++F+ G++IC+ +E N+A W LF+P+ FFEAYKNYL
Sbjct: 322 PAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKA--QWSALFQPYIFFEAYKNYL 379
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYF 390
++DI A +ADDL W+GWVESRLR LTLKIER T MLQCHP+P ++ D SK + ++F
Sbjct: 380 QVDIIASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSAFF 439
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 450
MGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFPGG
Sbjct: 440 MGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPGG 499
Query: 451 VRPSRPSKGTWDSRRALERKVSSHTKPGADDGR---------------KRKQTDDNVDTH 495
+ +R + R +S + DD KRK + VD
Sbjct: 500 YKRTR-----------MPRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKK 548
Query: 496 LRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNL---- 551
A++ E S S + + E ++ LAGS + +N
Sbjct: 549 PGKPDKRASISPQRLECVSPESCTSK-SGGTTQMSIECIEVVRLAGSTTKDANDNCEVKS 607
Query: 552 TDSIRGSRNSVEVS----SHNGKVD 572
+D++ GS S EV+ S G VD
Sbjct: 608 SDALPGSGLSTEVADMQISEPGFVD 632
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/573 (55%), Positives = 396/573 (69%), Gaps = 53/573 (9%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------- 59
+PISLAGP D D+ RT +L K+L + LYES +E+ REEVLG LD+
Sbjct: 6 KPISLAGPLDADVQRTAELNKFLVEAGLYESADESARREEVLGELDKIVKVWVKQLTSQR 65
Query: 60 -----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
VHGPGADIDTLCVGP + REEDFF LH +L + E
Sbjct: 66 GYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEE 125
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
V++L PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ+++L + DE TVRSL
Sbjct: 126 VSQLQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDEATVRSLT 185
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
GCRV DQILRLVP I++FRTTLRC++ WA+RRGVYSNV GFLGG+NWALLVAR+CQLYPN
Sbjct: 186 GCRVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVARVCQLYPN 245
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
AVPSMLVSRFFRV+TQWRWP PV+LCAIEE LG VWDPR+NP+D+ H MPIITPAYPC
Sbjct: 246 AVPSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPC 305
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 336
MNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A W LFEPF FFEAYKNYL++DI
Sbjct: 306 MNSSYNVSTSTLRVMIEQFQFGNKICQEIEMNKA--SWSALFEPFNFFEAYKNYLQVDII 363
Query: 337 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQR 395
AE+ +DLR WKGWVESRLRQLTLKIER TY LQCHP+P +++D S+ +C++FMGL R
Sbjct: 364 AEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSR 423
Query: 396 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 455
K+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + R
Sbjct: 424 KEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPR 483
Query: 456 PSKGTWDSRRALERKVSSHTKPG---ADDGRKRKQTDDNVDTHLRNAKCHATMPS--SSG 510
P R + S PG D KRK +D C + + S G
Sbjct: 484 P------QRHVNHQHQSDKNDPGNGSPDSQLKRKHDSTGIDD---TEPCQSVKRASISPG 534
Query: 511 EFREGSPIMSTISSSSINLQFEHMDANELAGSN 543
+ SP +S I+ + + +N GS
Sbjct: 535 HPKTSSPRSGNVSDEPISNSQQKVTSNASGGSQ 567
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 402/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 21 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 81 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L + DE TVR
Sbjct: 141 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCDVDEPTVR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 201 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+N +D+YHLMPIITPA
Sbjct: 261 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 321 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 379 DIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 438
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 439 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 498
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 499 RPRQSRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSPQSLD 558
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LT+ R NS
Sbjct: 559 IVSPESSAITTGWTPPVCNLRRPPSEEIEAENLNTECTE--LTNFARNECNS 608
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/489 (61%), Positives = 368/489 (75%), Gaps = 48/489 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ G+T+PIS+AGPT+ D+ R+ +LEK S+EEA+ R EVL RL Q
Sbjct: 17 KQYGVTKPISVAGPTEVDIQRSLELEK---------SKEEAIKRAEVLDRLGQIVKDWVK 67
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPG DIDTLC+GP + +REEDFF LH +
Sbjct: 68 QLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFILHNI 127
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 128 LADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDEP 187
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 188 TVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 247
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPII
Sbjct: 248 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPII 307
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKNY
Sbjct: 308 TPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKNY 365
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSY 389
L++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C++
Sbjct: 366 LQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAF 425
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 426 FMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPE 485
Query: 450 GVRPSRPSK 458
G + SRP +
Sbjct: 486 GYKRSRPQR 494
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 21 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 81 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 141 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 201 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 261 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 321 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 379 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 438
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 439 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 498
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 499 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 558
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 559 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 379
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 380 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 439
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 440 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 499
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 500 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 559
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 560 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 400/592 (67%), Gaps = 44/592 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+SLAGP+ D+ R +LEKYL D LYES+++ + REEVLGR+DQ
Sbjct: 21 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 81 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE TVR
Sbjct: 141 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 201 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPIITPA
Sbjct: 261 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKNYL++
Sbjct: 321 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKNYLQV 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMG 392
DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C++FMG
Sbjct: 379 DIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMG 438
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R
Sbjct: 439 LQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYR 498
Query: 453 PSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
R S+ ++ E SH+ + KRK + +D + A++ S +
Sbjct: 499 RPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLD 558
Query: 512 F--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
E S I + + NL+ + E N E E LTD R NS
Sbjct: 559 IVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 310/528 (58%), Positives = 371/528 (70%), Gaps = 53/528 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T+PIS+AGP D D+ R ++LEK+L D LYES+EE+ REEVL R+ Q
Sbjct: 27 GVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLSRIGQIVKDWVKQLT 86
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADIDTLCVGP + REEDFF LH +L E
Sbjct: 87 RIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYMLHNILEE 146
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EV+EL PVPDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE TVR
Sbjct: 147 MEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDEPTVR 206
Query: 154 SLNGCRVTDQILRLVPKIQNFRT--------------TLRCMRFWAKRRGVYSNVAGFLG 199
SLNGCRV DQIL+LVP + LRC++FWAKRRGVYSNV GFLG
Sbjct: 207 SLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAKRRGVYSNVTGFLG 266
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 259
G+NWALLVAR+CQLYPNAVPSML+SRFFRVYT WRWPNPV+LCAIEE LG VWDPR+N
Sbjct: 267 GVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKN 326
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
P+D+ H MPIITPAYPCMNSSYNVSTSTLR+MM++FQ G+++CE +E N+A W +LFE
Sbjct: 327 PRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKA--QWSSLFE 384
Query: 320 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
P+ FFE+YKNYL++DI A +ADDLR+WKGWVESR R LTL IER T LQCHP+P ++
Sbjct: 385 PYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYV 444
Query: 380 DKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 438
D SKP +C++FMGLQRKQG + EG+QFDIR +V EFK S Y KPGM+I V+HV
Sbjct: 445 DTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVR 504
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRK 486
RR +P FVFP G + R S+ + R + V + + KRK
Sbjct: 505 RRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRK 552
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 312/559 (55%), Positives = 382/559 (68%), Gaps = 48/559 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQ
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 503
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 504 TMPSSSGEFREGSPIMSTI 522
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 312/559 (55%), Positives = 382/559 (68%), Gaps = 48/559 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQ
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 503
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 504 TMPSSSGEFREGSPIMSTI 522
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 314/552 (56%), Positives = 378/552 (68%), Gaps = 41/552 (7%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT+P+S+AGP D+ R +LEK+L D LYES+EE + REEVL R+DQ
Sbjct: 25 GITKPLSIAGPCAADVKRNLELEKFLVDEGLYESKEETMRREEVLVRIDQIVKHWVKQLT 84
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGP ADIDTLCVGP + REEDFF L ML E
Sbjct: 85 RQRGYTDQMVDDANAVIFTFGSYRLGVHGPRADIDTLCVGPSYVNREEDFFIILRDMLAE 144
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 145 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 204
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 205 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQL 264
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVY QWRWPNPV+LC IEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 265 YPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPA 324
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LFE + FFEAYKNYL++
Sbjct: 325 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--QWSSLFEQYMFFEAYKNYLQV 382
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 383 DVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMG 442
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR +G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 443 LQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYK 502
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF 512
R S+ R V D KRK ++ +DT R K S
Sbjct: 503 RPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDT--RPEKREKRASRSPHSL 560
Query: 513 REGSPIMSTISS 524
SP+ S I++
Sbjct: 561 DAVSPVSSGITT 572
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 312/559 (55%), Positives = 382/559 (68%), Gaps = 48/559 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQ
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 503
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 504 TMPSSSGEFREGSPIMSTI 522
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 312/559 (55%), Positives = 382/559 (68%), Gaps = 48/559 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GITEP+S+AGP+ D+ R +LEK+L D LYES+EE + REEV+ R+DQ
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGP ADIDTLCVGP + REEDFF +L E
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKNYL++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKNYLQV 381
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMG 392
D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C++FMG
Sbjct: 382 DVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMG 441
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
LQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP G +
Sbjct: 442 LQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYK 501
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKCH-----A 503
SR S+ R + + KRK D+ +++ + A C A
Sbjct: 502 RSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDA 561
Query: 504 TMPSSSGEFREGSPIMSTI 522
P SSG G+P + +
Sbjct: 562 ASPDSSGITTSGTPQIGIV 580
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 331/615 (53%), Positives = 419/615 (68%), Gaps = 58/615 (9%)
Query: 1 MGSSNG-----QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLG 55
MG S G ++ G+T+PIS+AGP+ DL RTR+LEK+L LYES++EA REEVL
Sbjct: 1 MGGSEGVGASSKQFGVTKPISMAGPSATDLQRTRELEKFLAASGLYESKDEAAKREEVLH 60
Query: 56 RLDQ------------------------------------VHGPGADIDTLCVGPRHATR 79
RL + VHGPGAD+DTLC+GP + TR
Sbjct: 61 RLGEIVKSWVKQLTRLRGYTGQMVEDANAIILTFGSYRLGVHGPGADLDTLCIGPSYVTR 120
Query: 80 EEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 139
EEDFF LH +L + EVTEL P+PDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS
Sbjct: 121 EEDFFYTLHDILANVEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDIS 180
Query: 140 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 199
S+L N DE TVRSLNGCRV DQIL+LVP I++FRTTLRC++FWAKRRG+YSNV GFLG
Sbjct: 181 DVSVLHNVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLG 240
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 259
G+N ALLVAR+CQ YPNAVPSMLVSRFFRVYTQWRWP PV+LC IEE LG VW P +N
Sbjct: 241 GVNLALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKN 300
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
P+D+ H MPIITPAYPCMNSSYNVSTSTLR+MMD+FQ G++IC +E + A W LFE
Sbjct: 301 PRDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRA--CWKALFE 358
Query: 320 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
++FFE+YKNYL++D+ A +ADDLR+WKGWVESRLRQLTL IER T+ LQCHP+ +F
Sbjct: 359 QYSFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFV 418
Query: 380 DKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 438
D S+ +C++FMGLQRKQG V EG+QFDIR TV+EF+ +V+MY KPGM+I V+HV
Sbjct: 419 DTSRLCAHCAFFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVR 478
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG----RKRKQTDDNVDT 494
RR +P +V P G + SR S+ T +E S H + + RKRK +D VD
Sbjct: 479 RRQIPFYVVPDGYKRSRLSRPT----SQVENCKSFHNEVSGTEHVERIRKRK-NNDGVDV 533
Query: 495 HLRN-AKCHATMPSSSGEFREGSPIMSTISSSSIN--LQFEHMDANELAGSNREKVENNL 551
K + PS R S +S +++ + +++ N L+ S +++++
Sbjct: 534 RGDAIVKRQSASPSEDRLARHSSLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDR-- 591
Query: 552 TDSIRGSRNSVEVSS 566
T+S + NS ++S
Sbjct: 592 TESPEAASNSSVITS 606
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 316/623 (50%), Positives = 410/623 (65%), Gaps = 49/623 (7%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL-------- 54
SS + G P+SLAGPT DL RT +LEK+L + LYE +EE+ RE+VL
Sbjct: 14 SSPKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVK 73
Query: 55 ----------GRLDQ------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
G +Q VHGPGADIDTLCVGP + REEDFF
Sbjct: 74 EWVKQLTRKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVT 133
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
LH +L E EV EL PVPDAHVPV+KFKF G+SIDLLYA +SL VIP D DISQ S+L +
Sbjct: 134 LHGILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCD 193
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALL
Sbjct: 194 VDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALL 253
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HL
Sbjct: 254 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHL 313
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYPCMNSSYNVSTSTLR++M++FQ G+++C+ +E N+A +W+ LFEPF FFEA
Sbjct: 314 MPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKA--NWNALFEPFHFFEA 371
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPL 385
Y+ +L +DI AE+ DDLR WKGW+ESRLRQLTLKIER T +LQCHP+P ++SD + +
Sbjct: 372 YRKFLVVDIVAEDDDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECA 431
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+C+++MGL RK+G+ G+QFDIR TV EF + + MY+L KPGM ++V HV R +P++
Sbjct: 432 HCAFYMGLSRKEGLK-KRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSY 490
Query: 446 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCH 502
VF G + P T + + + P + KRK D +VD +
Sbjct: 491 VFEQGYKKPCP---TMHANQQEQSDGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRAS 547
Query: 503 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSR 559
+ P G+ + + + S + + + A S+ + + + LT S GS
Sbjct: 548 VSPPGVGTPPHLGNSVSNVVCDSPVKFVSSVVCSGAHASSSHDDINIEQAQLTTSPYGSE 607
Query: 560 NSVEVSSHNGKVDGPMIGDPRNK 582
++ + V ++ D +K
Sbjct: 608 DTSASGTSCAAVGAVILADESSK 630
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 316/623 (50%), Positives = 409/623 (65%), Gaps = 50/623 (8%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
SS + G P+SLAGPT DL RT +LEK+L + LYE +EE+ RE+VL + Q
Sbjct: 14 SSPKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLCEIGQIVK 73
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VHGP ADIDTLCVGP + REEDFF
Sbjct: 74 EWVKQLTSKKGYADQLVEQANAVLFTFGSYRLGVHGPEADIDTLCVGPSYVNREEDFFVT 133
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
LH +L E EVTEL PVPDAHVPV+KFKF G+SIDLLYA LSL VIP D DISQ S+L +
Sbjct: 134 LHGILAEKEEVTELQPVPDAHVPVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCD 193
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALL
Sbjct: 194 VDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALL 253
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HL
Sbjct: 254 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHL 313
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYPCMNSSYNVS+STLR++M++FQ G++IC+ +E N+A +W+ LFEPF FFEA
Sbjct: 314 MPIITPAYPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKA--NWNALFEPFHFFEA 371
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPL 385
Y+ +L +DI AEN DDLR WKGW+ESRLRQLTLKI+R T +LQCHP+P ++SD + +
Sbjct: 372 YRKFLVVDIVAENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECA 431
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+C+++MGL RK+G G+QFDIR TV EF + + MY+L PGM ++V HV R +P++
Sbjct: 432 HCAFYMGLSRKEGSK-KRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSY 490
Query: 446 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCH 502
VF G + P T + + + P D KRK D +V+ H ++ K
Sbjct: 491 VFEQGYKKPCP---TMHANQQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELH-KSVKWA 546
Query: 503 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSR 559
+ P G G+ + + + S + + + + + + + LT S GS
Sbjct: 547 SVSPPGVGTPPHGNSVSNVVCDSPVKFVSSVVCSRAQTSPSHDDINLEQAQLTTSPYGSE 606
Query: 560 NSVEVSSHNGKVDGPMIGDPRNK 582
++ + V ++ D +K
Sbjct: 607 DTSASGTSFAAVGAVVLADESSK 629
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 302/502 (60%), Positives = 370/502 (73%), Gaps = 44/502 (8%)
Query: 1 MGSSNG-----QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLG 55
MG S G ++ G+T+PIS+AGPT DL RTR+LEK+L LYES+EEA REEVL
Sbjct: 1 MGGSEGVGASSKQFGVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLH 60
Query: 56 RLDQ------------------------------------VHGPGADIDTLCVGPRHATR 79
RL + VHGPGAD+DTLC+GP + R
Sbjct: 61 RLGEIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNR 120
Query: 80 EEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 139
EEDFF LH +L + EVTEL P+PDAHVPVMKFKF G+SIDLLYA +S ++PEDLDIS
Sbjct: 121 EEDFFYTLHDILANIEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDIS 180
Query: 140 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 199
S+L N DE TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRG+YSNV GFLG
Sbjct: 181 DVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLG 240
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 259
G+N ALLVAR+CQ YP AVPSMLVSRFFRVYTQWRWP PV+LC IEE LG VW P +N
Sbjct: 241 GVNLALLVARVCQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKN 300
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
P+D+ H MPIITPAYPCMNSSYNVS STLR+MM++FQ G++IC +E ++ W LFE
Sbjct: 301 PRDRSHHMPIITPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKD--CWKALFE 358
Query: 320 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
++FFE+YKNYL++D+ A +ADDLR+WKGWVESRLRQLTL IER T+ LQCHP+ +F
Sbjct: 359 KYSFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFV 418
Query: 380 DKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 438
D S+ +C++FMGL RK+G V EG+QFDIR TV+EF+ +V+MY KPGM+I V+HV
Sbjct: 419 DTSRQCAHCAFFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVR 478
Query: 439 RRNLPNFVFPGGVRPSRPSKGT 460
RR +P +VFP G + SRPS+ T
Sbjct: 479 RRQIPCYVFPDGYKRSRPSRPT 500
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 304/489 (62%), Positives = 366/489 (74%), Gaps = 40/489 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+TEPIS A PT+ D + T++LE+ ++ + L S+EE V REEVLGRLD+
Sbjct: 7 LGVTEPISTADPTEVDYVNTKQLEECVKGLALQGSREEEVRREEVLGRLDELVNVWVKSM 66
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPGADIDTLCVGP + TREEDFF ELH +L
Sbjct: 67 SRKKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFVELHDLLQ 126
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ VTELH VPDAHVPVM F+F+G+ IDLLYARL LWVIPE+LDI QD+ILQN DEQ+V
Sbjct: 127 KTEGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDTILQNVDEQSV 186
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+ILRLVP +++FRTTLR ++ WAKRRGVYSNV GFLGG+NWALLVARICQ
Sbjct: 187 RSLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVARICQ 246
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAVPS+L+SRFFRVY QWRWPNPV+LCAIEEG LGL VWDPRRNP+D+ HLMPIITP
Sbjct: 247 LYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITP 306
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
YPC NSS+NVS STLR+M +EF+RG IC++++ A DW LFEP+ FFE+YKNYL+
Sbjct: 307 TYPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVA--DWSKLFEPYPFFESYKNYLQ 364
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFM 391
IDISA + +DLR WKGWVESRLRQL LK+E+ T+ LQCHPHP F D SK + CS+F+
Sbjct: 365 IDISAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSFFV 424
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 451
LQRKQG P FD+ T+ EFK +V+ Y L KP M+I V+HV + +P +VFP G+
Sbjct: 425 ALQRKQGAP-PSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGI 483
Query: 452 RPSRPSKGT 460
RP RP + T
Sbjct: 484 RPVRPPRPT 492
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 302/494 (61%), Positives = 369/494 (74%), Gaps = 41/494 (8%)
Query: 3 SSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
+ +G R LG+TEPIS A PT+ D T++LE++++ + L S+EE V REEVLG LD+
Sbjct: 4 AMDGDRYLGVTEPISTADPTEVDYANTKQLEEFVKGLALQGSREEEVRREEVLGLLDELV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGP + TREEDFF
Sbjct: 64 NVWVKMVSRMKGLNDEYVREARCKIFTFGSYRLGVHGPGADIDTLCVGPCYVTREEDFFV 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
ELH +L + VTELH VPDAHVPVM F+F+G+ IDLLYARL LWVIPE+LDI QDSILQ
Sbjct: 124 ELHDLLQKTDGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQ 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N DEQ+VRSLNGCRVTD+ILRLVP I++FRTTLR ++ WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 NVDEQSVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVARICQLYPNAVPS+L+SRFFRVY QWRWPNPV+LCAIEEGSLGL +WDPR+NP+D+ H
Sbjct: 244 LVARICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITP YPC NSS+NVS STLR+M +EF+RG +C++++ A DW LFEP+ FFE
Sbjct: 304 LMPIITPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVA--DWSKLFEPYPFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
+YKNYL+I+I+A + +DLR WKGWVESRLRQL LK+E+ T+ MLQCHPHP F D SK +
Sbjct: 362 SYKNYLQIEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKV 421
Query: 386 -YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
CS+F+ LQRKQG FD+ T+ EFK +V+ Y L KP M+I V+HV + +P
Sbjct: 422 QVCSFFVALQRKQGAQ-HSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPT 480
Query: 445 FVFPGGVRPSRPSK 458
+VFP G+RP RP +
Sbjct: 481 YVFPNGIRPVRPPR 494
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 293/521 (56%), Positives = 373/521 (71%), Gaps = 43/521 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
TVRSLNGCRV DQILRLVP +++ + C+ + V GFLGG+NWALLVAR
Sbjct: 198 TVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVAR 254
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPI
Sbjct: 255 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPI 314
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKN
Sbjct: 315 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKN 372
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 388
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 373 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 432
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 448
+FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 433 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 492
Query: 449 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 489
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 493 EGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 533
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 293/521 (56%), Positives = 373/521 (71%), Gaps = 43/521 (8%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT+PISLA P + DL +T +LEK+L + LYES EE+ REEVLG LD+
Sbjct: 18 KQYGITKPISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVK 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP + REEDFF LH +
Sbjct: 78 QLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDI 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 138 LAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEV 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
TVRSLNGCRV DQILRLVP +++ + C+ + V GFLGG+NWALLVAR
Sbjct: 198 TVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVAR 254
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPI
Sbjct: 255 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPI 314
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKN
Sbjct: 315 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKN 372
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 388
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 373 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 432
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 448
+FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 433 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 492
Query: 449 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 489
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 493 EGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 533
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/594 (53%), Positives = 389/594 (65%), Gaps = 26/594 (4%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VHGPGAD+DTLC+GP + REEDFF H +L M EVTEL PVPDAHVPVMKFKF G+S
Sbjct: 19 VHGPGADLDTLCIGPSYVNREEDFFYTFHDILASMDEVTELQPVPDAHVPVMKFKFDGIS 78
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDLLYA +S ++PE+LDIS S+L N DE TVRSLNGCRV DQIL+LVP I+ FRTTLR
Sbjct: 79 IDLLYASISCLIVPEELDISDVSVLHNIDEPTVRSLNGCRVADQILKLVPNIEYFRTTLR 138
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++FWAKRRGVYSNV GFLGG+NWALLVAR+CQLYPNAVPSMLVSRFFRVYTQWRWPNPV
Sbjct: 139 CLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPV 198
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+LC+IEE LG VW P RNP+D+ HLMPIITPAYPCMNSSYNVS STLR+MM++FQ G+
Sbjct: 199 MLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSSYNVSASTLRVMMEQFQYGN 258
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ICE +E N+ V W LF P+ FFE YKN+L+ID+ A + DDLR WKGWVESRLRQLTL
Sbjct: 259 KICEDIELNK--VGWSALFVPYVFFEGYKNFLQIDVVAADVDDLRAWKGWVESRLRQLTL 316
Query: 360 KIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
IER T LQCHP+P ++ D ++ + ++FMGLQRKQG V EG+QFDIR TV+ F+
Sbjct: 317 MIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEVVQEGQQFDIRGTVEAFRH 376
Query: 419 AVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWD----SRRALERKVSSH 474
+++MY KPGM I V+H+ RR +P +VFP G + SRPS+ T + E +VS
Sbjct: 377 SINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTVPVENRPKSLQENEVSGT 436
Query: 475 TKPGADDGRKRK----QTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQ 530
G + RK + D + H N + P + + + S S+S N +
Sbjct: 437 ELRGRNIKRKYDDKGVKQDVVLKKHCANPFVESLTPGNYA-VSDCQELKSGESTSLTNSE 495
Query: 531 FEHMD------ANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGL 584
+ +D A GSN V + S GS V S G VD
Sbjct: 496 QDELDRRMSPEAGTECGSNSSGVTS--VSSEDGSPEYVASVSVAGYVDDSARAVEAMNNS 553
Query: 585 SFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQ 638
F+++ D+ KL I + S Q D L+ LE A F ST+
Sbjct: 554 RFDTTYMADSVKLGIGTLASANNEVLQ------DTLQTHLEPIAMAGMFLDSTK 601
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 282/440 (64%), Positives = 340/440 (77%), Gaps = 39/440 (8%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
GS ++ GIT+P+SL GP + DL RT +LEK+L + LYES +E+ REEVLG+LDQ
Sbjct: 4 GSDPPKQYGITKPLSLLGPVEADLQRTAELEKFLVEAGLYESPDESARREEVLGKLDQIV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCVGP + REEDFF
Sbjct: 64 KDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFI 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
LH +L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L
Sbjct: 124 VLHGILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLY 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
+ DE TVRSLNGCRV DQI+RLVP I+NFRTTLRC+++WAKRRGVYSNV GFLGG+NWAL
Sbjct: 184 DVDEATVRSLNGCRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWAL 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE +G VWDPR+NP+D+ H
Sbjct: 244 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYPCMNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A W LFEPF FFE
Sbjct: 304 HMPIITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKA--SWSALFEPFQFFE 361
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
AYKNYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+
Sbjct: 362 AYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQC 421
Query: 386 -YCSYFMGLQRKQGVPVGEG 404
+C++FMGL RK+GV + EG
Sbjct: 422 AHCAFFMGLSRKEGVKIQEG 441
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 286/485 (58%), Positives = 357/485 (73%), Gaps = 41/485 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G P+SLA PT DL +T +LEK+L + LYE +EE+ REEVL +DQ
Sbjct: 23 GADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVT 82
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADID LC+GP + REE+FF L+ L+E
Sbjct: 83 IQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSE 142
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVR
Sbjct: 143 MEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVR 202
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQL
Sbjct: 203 SLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQL 262
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITP 272
YPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITP
Sbjct: 263 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITP 322
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL
Sbjct: 323 AYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLV 380
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFM 391
+DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++M
Sbjct: 381 VDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYM 440
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 451
GL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G
Sbjct: 441 GLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGC 499
Query: 452 RPSRP 456
+ +RP
Sbjct: 500 QKTRP 504
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 286/485 (58%), Positives = 357/485 (73%), Gaps = 41/485 (8%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G P+SLA PT DL +T +LEK+L + LYE +EE+ REEVL +DQ
Sbjct: 24 GADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVT 83
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPGADID LC+GP + REE+FF L+ L+E
Sbjct: 84 IQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSE 143
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
M EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVR
Sbjct: 144 MEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVR 203
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQL
Sbjct: 204 SLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQL 263
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITP 272
YPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITP
Sbjct: 264 YPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITP 323
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL
Sbjct: 324 AYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLV 381
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFM 391
+DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++M
Sbjct: 382 VDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYM 441
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 451
GL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G
Sbjct: 442 GLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGC 500
Query: 452 RPSRP 456
+ +RP
Sbjct: 501 QKTRP 505
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/481 (59%), Positives = 356/481 (74%), Gaps = 41/481 (8%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------------- 59
P+SLA PT DL +T +LEK+L + LYE +EE+ REEVL +DQ
Sbjct: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
Query: 60 ----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 97
VHGPGADID LC+GP + REE+FF L+ L+EM EV
Sbjct: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Query: 98 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 157
TEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNG
Sbjct: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
Query: 158 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 217
CRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNA
Sbjct: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
Query: 218 VPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
VPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPC
Sbjct: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 336
MNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI
Sbjct: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIV 377
Query: 337 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQR 395
A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL R
Sbjct: 378 ADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSR 437
Query: 396 KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 455
K+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +R
Sbjct: 438 KEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTR 496
Query: 456 P 456
P
Sbjct: 497 P 497
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/475 (59%), Positives = 351/475 (73%), Gaps = 41/475 (8%)
Query: 20 PTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------------------- 59
PT DL +T +LEK+L + LYE +EE+ REEVL +DQ
Sbjct: 2 PTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYSEQMV 61
Query: 60 ----------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPV 103
VHGPGADID LC+GP + REE+FF L+ L+EM EVTEL PV
Sbjct: 62 KEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVTLYGALSEMEEVTELQPV 121
Query: 104 PDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQ 163
PDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE TVRSLNGCRV DQ
Sbjct: 122 PDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQ 181
Query: 164 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLV 223
ILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNAVPSMLV
Sbjct: 182 ILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLV 241
Query: 224 SRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 282
SRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPIITPAYPCMNSSYN
Sbjct: 242 SRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYN 301
Query: 283 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 342
VSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY YL +DI A++ DD
Sbjct: 302 VSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTRYLVVDIVADDDDD 359
Query: 343 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGLQRKQGVPV 401
LR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+++MGL RK+G+ +
Sbjct: 360 LRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKEGMKI 419
Query: 402 GEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP 456
G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF G + +RP
Sbjct: 420 -RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRP 473
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 285/515 (55%), Positives = 357/515 (69%), Gaps = 45/515 (8%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----- 60
++ G+T+PIS PTD + R+ +LEK L D +Y+ +EEA REE++ +L V
Sbjct: 8 AKQFGLTKPISYVKPTDFHIRRSFELEKVLWDGGVYQVEEEARKREEIIEKLRVVVKSWV 67
Query: 61 -------------------------------HGPGADIDTLCVGPRHATREEDFFGELHQ 89
HGPG+DIDTLC+GP + REEDFF LH
Sbjct: 68 KQVTRWKGYTDKMVENANALIVTFGSYRLGVHGPGSDIDTLCIGPSYVNREEDFFIRLHN 127
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
+L M V+EL P+P AHVPVMKFKF GVSIDLLYA +S V+P+DLDIS +SIL ADE
Sbjct: 128 ILIGMEGVSELLPIPHAHVPVMKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADE 187
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
TVRSL+GCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+N ALLVAR
Sbjct: 188 PTVRSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVAR 247
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
+CQLYPNA PSMLVSRFFRVYTQW WPNPV+LC IE+ LG VWDPRRNP D+ H MPI
Sbjct: 248 VCQLYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPI 307
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP MNSSY+VSTSTL MM +F ++IC +E N++ W LFEPF FF +Y+N
Sbjct: 308 ITPAYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKS--SWGALFEPFLFFRSYQN 365
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 388
YL++DI+A +ADDLR WKGWVESRLRQLTLK+ER T L C P P ++ D S+ +C+
Sbjct: 366 YLQVDITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCT 425
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFK-QAVSMYTLRKPGMQISVAHVTRRNLPNFVF 447
YFMGL++K GV V GE DIR+ +EFK + V+M++ PGM+I V+HV + LP++VF
Sbjct: 426 YFMGLRKKPGVEV--GEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVF 483
Query: 448 PGGVRPSRPSKGTWDSRRALERKVSSHT---KPGA 479
P R S + + + +RK++S KP A
Sbjct: 484 PDEYRKRSQSSKSINQQHQNKRKINSEMVDGKPSA 518
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/541 (48%), Positives = 335/541 (61%), Gaps = 73/541 (13%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL----GR 56
M S + Q G+ EPISL GPT DL T +LE+ LR+ LYES EE +REEVL G
Sbjct: 1 MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGV 60
Query: 57 LDQ--------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
+D+ VHG G+DID L VGP + R+ DFF
Sbjct: 61 VDRWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDRDFF 120
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
G L L E V EL PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L
Sbjct: 121 GALAAALAETAGVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVL 180
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+ D T RSLNG RV D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA
Sbjct: 181 RGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWA 240
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNP 260
+LVAR+C LYPNA PSML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP
Sbjct: 241 ILVARVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNP 300
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFE 319
+DK HLMPI+TPAYPCMNS YNVS +TLR++ ++ G +C E ++ WD LF+
Sbjct: 301 RDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQ 360
Query: 320 PFTFFEAYKNYLRIDISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
PF FF AYK+YL++D++ DDLR WKGWVESRLR L+ ++E T ML CH HP
Sbjct: 361 PFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQP 420
Query: 378 FSDK--SKPLY----CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGM 430
++ + ++P S+F+GL + P + Q FD+R T + FK+ V MY +PGM
Sbjct: 421 YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGM 480
Query: 431 QISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 490
+++VAHV R++LP++V R L R PG D KRK+ DD
Sbjct: 481 EVAVAHVRRKDLPSYVL-----------------RQLLR------SPGRHDQLKRKRADD 517
Query: 491 N 491
+
Sbjct: 518 D 518
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/494 (49%), Positives = 316/494 (63%), Gaps = 48/494 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL----GR 56
M SS ++ EPISL GPT DL T +LEK LR+ +YES +E+ R EVL G
Sbjct: 3 MASSQPKQQMFGEPISLVGPTPADLEATAELEKVLREAGMYESPQESAVRAEVLRDLQGI 62
Query: 57 LDQ--------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
+D+ VHG G+DID L VGP R++DFF
Sbjct: 63 VDRWVKQLTLKHGYPDAMVDEATALLLPFGSYRLGVHGGGSDIDALVVGPSFVDRDQDFF 122
Query: 85 GELHQMLTEMPE-VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
G L L E E VT+L PVP AHVPVMK +F GV +DL+YA ++L V+P DLD+S ++
Sbjct: 123 GVLAGALAEATEAVTDLQPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRDLDLSDRAV 182
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ D T RS+NG RV D+ILRLVP FRT LRC++ WAK RGVYSNV+GFLGG+ W
Sbjct: 183 LRGLDHVTARSMNGVRVADEILRLVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGVAW 242
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKD 262
A+LVAR+CQLYPNA PSMLVSRFF+V +QW+WP PV+LC IE + LGL VWD RRNP+D
Sbjct: 243 AILVARVCQLYPNAAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRD 302
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+ HLMP+ITPAYPCMN +YNVS +T RI+ ++ Q GH C+ + D W LF+PF
Sbjct: 303 RTHLMPVITPAYPCMNCTYNVSQATQRIIKEQIQAGHVACQEIAAG-GDRGWGALFQPFP 361
Query: 323 FFEAYKNYLRIDIS-AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
FF +K+YL++D + A ++LR WKGWVESRLRQL K+ER T+ L CH +P + +
Sbjct: 362 FFRTHKSYLQVDATVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAE 421
Query: 382 SKPLYC--SYFMGLQR------KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQIS 433
L C S+F+GL + + P G+ QFD+R T EF Q V Y +PG++++
Sbjct: 422 PHGLRCASSFFVGLSKPQQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELA 481
Query: 434 VAHVTRRNLPNFVF 447
V HV R++LP +V
Sbjct: 482 VKHVRRKDLPPYVM 495
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/541 (47%), Positives = 333/541 (61%), Gaps = 73/541 (13%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL----GR 56
M S + Q G+ EPISL GPT DL T +LE+ LR+ LYES EE +REEVL G
Sbjct: 1 MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGV 60
Query: 57 LDQ--------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
+D+ VHG G+DID L VGP + + DFF
Sbjct: 61 VDRWVKRLTRQRGYPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFF 120
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
G L L E V EL PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L
Sbjct: 121 GALATALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVL 180
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+ D T RSLNG RV D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA
Sbjct: 181 RGLDLATARSLNGVRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWA 240
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNP 260
+LVA +C LYPNA PSML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP
Sbjct: 241 ILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNP 300
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFE 319
+DK HLMPI+TPAYPCMNS YNVS +TLR++ ++ G +C E ++ WD LF+
Sbjct: 301 RDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQ 360
Query: 320 PFTFFEAYKNYLRIDISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
PF FF AYK+YL++D++ DDLR WKGWVESRLR L+ ++E T ML CH HP
Sbjct: 361 PFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQP 420
Query: 378 FSDK--SKPLY----CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGM 430
++ + ++P S+F+GL + P + Q FD+R T + FK+ V MY +PGM
Sbjct: 421 YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGM 480
Query: 431 QISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 490
+++VAHV R++LP++V R L R PG D KRK+ DD
Sbjct: 481 EVAVAHVRRKDLPSYVL-----------------RQLLR------SPGRHDQLKRKRADD 517
Query: 491 N 491
+
Sbjct: 518 D 518
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/485 (50%), Positives = 314/485 (64%), Gaps = 52/485 (10%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL------------------ 54
+PISL GPT DL T +LEK+LRD LYES EE +RE+VL
Sbjct: 11 QPISLLGPTPADLESTSRLEKHLRDAGLYESPEELAAREDVLCELRAIVDRWVKRLTAQR 70
Query: 55 ----GRLDQ--------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
G + Q VHG G+DID L VGP + R+ DFFG L +L+EM +
Sbjct: 71 GYPDGMVSQATAPVLPFGSYRLGVHGRGSDIDALVVGPSYVDRDHDFFGVLGGVLSEMTD 130
Query: 97 --VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
VTEL PVP AHVPV+K +F GV +DLL+A + L V+PEDLD+ S+L+ D TVRS
Sbjct: 131 DAVTELQPVPGAHVPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGMDLATVRS 190
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
+NG RV D+ILRLVP FRTTLRC++ WAK RGVYSNV GF GG+ WA+LVA +CQLY
Sbjct: 191 VNGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILVAFVCQLY 250
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITP 272
PNA PS+LVSRFF+V W+WPNPV L IE + L L VWDPRRNP+D+ HLMP++TP
Sbjct: 251 PNAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTP 310
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYPCMNS YNVS +TLR + + Q G+ +C+ + + A W LFEPF FF+ YK+YLR
Sbjct: 311 AYPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASGA--GWGALFEPFHFFKEYKSYLR 368
Query: 333 IDISAENA---DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY--C 387
+D+ DLR WKGWVESRLRQL +++E T ML CHP+P ++ K L
Sbjct: 369 VDVKVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKPTDLQRTT 428
Query: 388 SYFMGLQRKQGVPVGEGEQ-----FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 442
S+F+GL + Q P + +Q FD+R T +EFK+ V MY +PGM++ V+H R++L
Sbjct: 429 SFFVGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDL 488
Query: 443 PNFVF 447
P++V
Sbjct: 489 PSYVL 493
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/481 (49%), Positives = 305/481 (63%), Gaps = 46/481 (9%)
Query: 12 TEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL----GRLD--------- 58
+EPISL GPT D+ T +LEK LR+ +YES EE+ R EVL G +D
Sbjct: 10 SEPISLVGPTPADIEATAQLEKLLREAGMYESAEESAVRAEVLRDLQGIVDLWVKQLMLK 69
Query: 59 -----------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP 95
V G G+DID L VGP R++DFFG L +L E
Sbjct: 70 HGYPDAMVDEATAFVLPFGSYRLGVLGGGSDIDALVVGPSFVDRDQDFFGVLAGVLAETE 129
Query: 96 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 155
VTELHPVP AHVPVMK +F GV +DL+YA ++L V+P +LD+S +L+ D T RS+
Sbjct: 130 AVTELHPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDHVTARSM 189
Query: 156 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 215
NG RV D+I+RLVP FRTTLRC++ WAK RGVYSNV+GFLGG+ WA+LVAR+CQLYP
Sbjct: 190 NGVRVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVARVCQLYP 249
Query: 216 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAY 274
NAVPSMLVSRFF+V++ WRWP PV+LC IE + LGL VWD RRN D+ HLMP+ITPAY
Sbjct: 250 NAVPSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAY 309
Query: 275 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 334
PCMN +YNVS +T R++ ++ Q G C+ + DW LF+P FF +K+YL++D
Sbjct: 310 PCMNCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGR-DWGALFQPSPFFSTHKSYLQVD 368
Query: 335 IS-AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL--YCSYFM 391
+ A A++LR WKGWVESRLRQL K+ER T+ L CH +P + + L S+F+
Sbjct: 369 AAVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSFFV 428
Query: 392 GL-----QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
GL Q K P G FD+R TV EF+Q V Y +PG+++ V HV R LP +V
Sbjct: 429 GLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRNKLPAYV 488
Query: 447 F 447
Sbjct: 489 M 489
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/541 (46%), Positives = 323/541 (59%), Gaps = 73/541 (13%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEV------- 53
M S + Q G+ EPISL GPT DL T +LE+ LR+ LYES
Sbjct: 1 MASQSPQSRGVAEPISLVGPTPADLESTARLERLLREEGLYESARGDGGPGGGAPRPPRR 60
Query: 54 -----------------------------LGRLDQVHGPGADIDTLCVGPRHATREEDFF 84
G VHG G+DID L VGP + R+ DFF
Sbjct: 61 RRPLGEAPHAAAPGTPTAWPDRGHRPGAPFGSTLGVHGRGSDIDALVVGPSYVDRDRDFF 120
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
G L L E V EL PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L
Sbjct: 121 GALAAALAETAAVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVL 180
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+ D T RSLNG RV D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA
Sbjct: 181 RGLDLATARSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWA 240
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNP 260
+LVA +C LYPNA PSML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP
Sbjct: 241 ILVACVCLLYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRNP 300
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFE 319
+DK HLMPI+TPAYPCMNS YNVS +TLR++ ++ G +C E ++ WD LF+
Sbjct: 301 RDKIHLMPIVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQ 360
Query: 320 PFTFFEAYKNYLRIDISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
PF FF AYK+YL++D++ DDLR WKGWVESRLR L+ ++E T ML CH HP
Sbjct: 361 PFNFFGAYKSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQP 420
Query: 378 FSDK--SKPLY----CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGM 430
++ + ++P S+F+GL + P + Q FD+R T + FK+ V MY +PGM
Sbjct: 421 YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGM 480
Query: 431 QISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 490
+++VAHV R++LP++V R L R PG D KRK+ DD
Sbjct: 481 EVAVAHVRRKDLPSYVL-----------------RQLLR------SPGRHDQLKRKRADD 517
Query: 491 N 491
+
Sbjct: 518 D 518
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/342 (62%), Positives = 255/342 (74%), Gaps = 36/342 (10%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL-------- 54
SS + G P+SLAGPT DL RT +LEK+L + LYE +EE+ RE+VL
Sbjct: 14 SSPKRYSGTDPPLSLAGPTLADLQRTAELEKFLVEAGLYEGKEESAKREDVLSEIGLIVK 73
Query: 55 ----------GRLDQ------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
G +Q VHGPGADIDTLCVGP + REEDFF
Sbjct: 74 EWVKQLTRKKGYAEQLVEQANAILFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFVT 133
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
LH +L E EV EL PVPDAHVPV+KFKF G+SIDLLYA +SL VIP D DISQ S+L +
Sbjct: 134 LHGILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCD 193
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALL
Sbjct: 194 VDEATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALL 253
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VAR+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HL
Sbjct: 254 VARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHL 313
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN 308
MPIITPAYPCMNSSYNVSTSTLR++M++FQ G+++C+ + +N
Sbjct: 314 MPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQVLPEN 355
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/543 (44%), Positives = 316/543 (58%), Gaps = 67/543 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+TEPIS A P+ D + +LE L NL+ES EE+ REE+LG+L+Q
Sbjct: 53 LGVTEPISTAPPSSIDFKLSTELENTLISFNLFESPEESRKREEILGKLNQIVREWAKQV 112
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTLCVGP+H R DFF +L +L
Sbjct: 113 SLKKGYPEQTASEVVAKIFTFGSYRLGVHGPGSDIDTLCVGPKHIMRS-DFFDDLSDILK 171
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQT 151
PE+TE V DA VPV+ FSG+ IDL+YA+L+L IPE+L D+ +S L+N DE++
Sbjct: 172 VHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNIDEKS 231
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
+ SLNGCRVTDQIL+LVP I NFR LRC++ WA RRG+YSN+ GFLGG++WALL ARIC
Sbjct: 232 ILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTARIC 291
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPII 270
QLYPN+ PS ++ RFF+VY W+WP P+LLC I+EG LG +VW+P+R DK HLMPII
Sbjct: 292 QLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPII 348
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP MNS+YNVS STL++M EF RG EI +E E W L E FF Y Y
Sbjct: 349 TPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGEC--TWKNLLEKCDFFTRYSFY 406
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SKP-- 384
+ ID + N +D R W+GW+ES+LR L +E T M P+P F++ + P
Sbjct: 407 IEIDCYSMNEEDSRKWEGWIESKLRFLISNLE-STPKMKFAVPYPKGFTNNLHKANNPDQ 465
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRN 441
+ S+FMGL G + D+ V EF + + +P M I V ++ ++
Sbjct: 466 ICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQ 525
Query: 442 LPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKC 501
LP FV G P P K T +K SS +P A ++K +N D L + K
Sbjct: 526 LPAFVKDEG--PEEPVKTT--------KKRSSTGEPSA---TRKKLKSENSDNKLNSPKS 572
Query: 502 HAT 504
T
Sbjct: 573 PIT 575
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/492 (48%), Positives = 303/492 (61%), Gaps = 58/492 (11%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
R EPIS A PT DL TR LE++LRD LYESQEEA RE VLGRLD
Sbjct: 4 RRPFVEPISQAEPTPQDLKHTRDLEQHLRDQGLYESQEEAELREVVLGRLDGLVKEWIRG 63
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGE----LHQM 90
VHGPGADIDTLCVGP +ATRE DFFG L M
Sbjct: 64 VAALRGHPPEDANAKIFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCLQAM 123
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L +PEV L V A+VPVM+ KF G+SIDLLYARLS+ ++ EDLDI L++ D+Q
Sbjct: 124 LCALPEVLALRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHCDDQ 183
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+VRSLNGCRVTD ILR VP + +FRT LRC++ WA+RRGVYSNV G+LGG+NWA+LVA +
Sbjct: 184 SVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILVAYV 243
Query: 211 CQLYP---------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNP 260
C+L P P + V +VY+QW WP P++L AIE + SL + VWDPR NP
Sbjct: 244 CKLQPCLLASPPHLGPAPCLPVP---QVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENP 300
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADV-DWDTLF 318
+D+ HLMPIITPAYPCMNSSYNVS TL +M +EF+RG E+C M N + + DW L
Sbjct: 301 RDRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLL 360
Query: 319 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
EP FFE +K++L++++ A + +D W+GWV SR+R L +K+++ Q G
Sbjct: 361 EPLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMR-LLIKVDQQQQQQQQQQDGGGGG 419
Query: 379 SDKSKPLY----CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 434
S P C YFMGL +K+ + + + + D+ V EF V + R+ GM ISV
Sbjct: 420 SVADPPAQQQPRCFYFMGLSKKKAMIIPQS-KVDLTQPVNEFAHKVKEFEQRREGMDISV 478
Query: 435 AHVTRRNLPNFV 446
H+ +R LP +V
Sbjct: 479 RHLLQRQLPEWV 490
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/508 (44%), Positives = 294/508 (57%), Gaps = 77/508 (15%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------- 59
EP S A PT D +T LE LR+ LYES EEAV REEVLGRLD+
Sbjct: 1 EPFSRAPPTTKDFQQTADLELCLREQGLYESNEEAVLREEVLGRLDRLVKEWVQRVCAWL 60
Query: 60 -----------------------VHGPGADIDTLCVGPRHATREEDFFGE----LHQMLT 92
VHGPGADIDTLCVGPRH +R+ FFG L +ML+
Sbjct: 61 GLGEFGEVETNAKIFTFGSYRLGVHGPGADIDTLCVGPRHVSRDLHFFGTEEHCLQKMLS 120
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
++PEVTEL PV D+ VPV+K KFSGVSIDLLYA+L+ V+PE+LD+ S L+NAD+++V
Sbjct: 121 DLPEVTELQPVVDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADDKSV 180
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD +L V I+ FRT LR ++ WA+RRG+YSNV G+LGG+NWA+LVA C+
Sbjct: 181 RSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAYTCK 240
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYP + S++V RFF+V+ +W WP P++L IE ++GLQVWDPR NP+D HLMPIITP
Sbjct: 241 LYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITP 300
Query: 273 AYPCMNSSYNVSTSTLRIM------------MDEFQRGHEICEAMEKNEADVDWDTLFEP 320
AYP NSSYNVS STL M +EF+ G ++C + W L EP
Sbjct: 301 AYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEP 360
Query: 321 FTFFEAYKNYLRIDISAENADDL-------------RNWKGWVESRLRQLTLKIERHTYN 367
FF Y+NYL+ + + + W GWV SRLRQL +++E
Sbjct: 361 VPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE----P 416
Query: 368 MLQCHPHPGDF------SDKSKPLYCSYFMGLQRK--QGVPVGEGEQFDIRLTVKEFKQA 419
+ P P +P C YFMGL++K P G ++ V+EFK
Sbjct: 417 FVTVRPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQ 476
Query: 420 VSMYTLRKPGMQISVAHVTRRNLPNFVF 447
V Y K GM + + H ++ LP+FV
Sbjct: 477 VMGYLSWKEGMHVLITHQMQKALPSFVL 504
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/533 (42%), Positives = 308/533 (57%), Gaps = 85/533 (15%)
Query: 2 GSSNGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GSSN Q+ G+TEPISLA PT D ++ +LE LR NL+E EE+ REEVLG+LD
Sbjct: 69 GSSNQQQYYGVTEPISLASPTSIDTKQSTELETTLRGFNLFEPPEESRLREEVLGKLDAI 128
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH G+DIDTLCV P+H R DFF
Sbjct: 129 VKQWAIKVSVLKGFTEQMASEVIAKIFTYGSYRLGVHASGSDIDTLCVTPKHIMRA-DFF 187
Query: 85 GELHQMLTEMPEVTE---------------------------------LHPVPDAHVPVM 111
G L +L PE+TE + PV DA VPV+
Sbjct: 188 GTLADVLCVHPEITEFTVSTFFSGSSGSSGGSSSGSSGLQRILIKKTMVMPVKDAFVPVI 247
Query: 112 KFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 170
K F G+ IDL++ARLS+ IPEDL D+ ++ L+N D++ + SLNGCRVTDQILRLVP
Sbjct: 248 KMIFCGIPIDLIFARLSIPAIPEDLNDLIDENYLKNVDDKCIVSLNGCRVTDQILRLVPN 307
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 230
+ FR LRC++ WA+RRGVYSNV G LGG++WALL ARICQLYPNA PS +++RFF++Y
Sbjct: 308 VTTFRMALRCIKLWAQRRGVYSNVLGLLGGVSWALLTARICQLYPNAAPSTIINRFFKIY 367
Query: 231 TQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 289
W+WP+P+LLC I++ G L +VW+ +R DK HLMPI+TPAYP MNS+YNVS STL
Sbjct: 368 DGWKWPSPILLCQIQDGGQLAAKVWNQKR---DKSHLMPILTPAYPSMNSTYNVSRSTLS 424
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
++ EF RG EI + ++ E W L E FF Y+ YL+ID+SA D R W+GW
Sbjct: 425 LLKSEFSRGAEITKKIDSGER--KWTDLVEKGDFFTRYRFYLQIDVSAPEEDTHRKWEGW 482
Query: 350 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL---YCS-YFMGLQRKQGVPVGEGE 405
+ES+LR L +E+ T NM P+ F++K+ + C+ +FMGLQ +G +
Sbjct: 483 IESKLRILISNLEQ-TPNMKFAIPYAKSFANKASAVNGGICTCFFMGLQFNFSTAIGADK 541
Query: 406 QFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 458
D+ V F + + + P +++ + ++ ++NLP FV G P P K
Sbjct: 542 NVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEG--PEHPPK 592
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/546 (42%), Positives = 312/546 (57%), Gaps = 89/546 (16%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
G+ G G+TEPIS A PT D +R+LE++L + NLYE+ +EA RE+VL L Q
Sbjct: 7 FGTRTGGYKGVTEPISTATPTPLDYRLSRELEEFLHNRNLYENNKEAQRREQVLAELHQL 66
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V+ P ADIDTLC+ PR+ R D F
Sbjct: 67 INEWVRRVSRSQGIAEEIVSETEAKLFTFGSYRLGVNPPNADIDTLCIVPRYVERNRDVF 126
Query: 85 G-------------ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 131
G L + P++ ++ PV DAHVPV+KFKF+GV IDLL ARL
Sbjct: 127 GIPSESGSVPEEENVLVNIFKSHPKIEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSK 186
Query: 132 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 191
+PE LDI DSIL+N D++T RS+NG RVTD ILRLVP ++ FRTTLR ++FWAK RG+Y
Sbjct: 187 LPERLDILDDSILRNVDDETQRSVNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIY 246
Query: 192 SNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG--SL 249
SNV GFLGG++WA+LVARICQLYP+A ++++SRFFRVY+QW+WPNPVLL +I G S
Sbjct: 247 SNVLGFLGGVSWAILVARICQLYPHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSC 306
Query: 250 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM---- 305
G +VW+P P D+ HLMP+ITPAYP MNS++NVS +TLRI+ +E RG EI + +
Sbjct: 307 GFKVWNPAVFPADRKHLMPVITPAYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQS 366
Query: 306 ---------EKNEAD-------------------VDWDTLFEPFTFFEAYKNYLRIDISA 337
E E D + W LFE FF +KNYL+I++ +
Sbjct: 367 NSSRKTISTEDTENDQTTQVEHSEETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVIS 426
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRK- 396
A++ R W G+VES+LR LTLK+E ++ ++ +P+P ++ S+F+GL
Sbjct: 427 GTAENQRKWHGFVESKLRVLTLKLEILSHTLI--YPYPVPYTRPGVQFCESFFIGLSFSL 484
Query: 397 QGVPVGEG---EQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
+P G + D+ V E+ V + R M++SV HV R+ LP +VF
Sbjct: 485 PKLPNQNGSKERKIDMSGPVSEWVNYVLSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHR 544
Query: 454 SRPSKG 459
SR K
Sbjct: 545 SRKRKS 550
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/531 (41%), Positives = 311/531 (58%), Gaps = 71/531 (13%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----- 58
+N G+T PIS + PT DL + +LE L+ NL+E+ EE+ +EE+LG+L+
Sbjct: 22 TNQITYGVTVPISFSNPTPADLKLSTELEDTLKSFNLFETPEESGKKEEILGKLNLIVRK 81
Query: 59 -------------------------------QVHGPGADIDTLCVGPRHATREEDFFGEL 87
V GP +DIDTLCV P+H R DFF L
Sbjct: 82 WVIDVSLKRGFTEQMSLEVVAKIFTFGSYRLGVSGPSSDIDTLCVAPKHIMRS-DFFDFL 140
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQN 146
+ L P++TEL+ V DA+VPV+ FSG++IDL++ARLSL I ED+ D+ D+ L+N
Sbjct: 141 GEALKVHPDITELNMVKDAYVPVITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKN 200
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
D+Q++ SLNGCRVTD+IL LVP FR LR ++ WA+RRG+YSNV GFLGG++WALL
Sbjct: 201 LDDQSITSLNGCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALL 260
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGSL-GLQVWDPRRNPK 261
ARICQLYPNA PS +++RFF++Y WRW P PVLLC I++G + +VW+ +R
Sbjct: 261 TARICQLYPNAAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQKR--- 317
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DK HLMPI+TPAYP MNS+YNVS STL ++ DEF RG++I + +E EA +W+ L E
Sbjct: 318 DKSHLMPILTPAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEA--NWNKLLEKS 375
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
FF Y+ YL+ID SA+N ++ R W+GW+ES+LR+L +E+ T M P P F +K
Sbjct: 376 DFFSRYQFYLQIDCSAQNEEEHRKWEGWIESKLRKLISFLEQ-TPKMKFAIPFPKSFENK 434
Query: 382 SKP-------------------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 422
P + S+FMGL G + DI V +F +
Sbjct: 435 PTPAATTTAANGEAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKD 494
Query: 423 YTLRKPGMQISVAHVTRRNLPNFV---FPGGVRPSRPSKGTWDSRRALERK 470
+ + P M++ V ++ RR LP FV P +P +G+ +S ++K
Sbjct: 495 WAGKGPTMEMKVHYIKRRQLPAFVKAEAPPEEKPKAKKRGSANSADVAKKK 545
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/490 (43%), Positives = 295/490 (60%), Gaps = 48/490 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT ISLA P + D TRKL + ++ ++E +EE R VLG+L+
Sbjct: 18 KHYGITSAISLAPPREIDHEYTRKLCEAMQPFGVFEDEEELNHRLAVLGKLNNFVKEWIA 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFQSFFEK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D +
Sbjct: 137 LKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWPKLFEPPSFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK-PLY 386
+ + SA ++ W G VES++R L +ER+ Y + +P PG ++S+
Sbjct: 375 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRSENDFV 434
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 442
C +F+G+ K+ V E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 435 CMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 493
Query: 443 PNFVFPGGVR 452
++ P V+
Sbjct: 494 HQYLPPELVQ 503
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/507 (41%), Positives = 305/507 (60%), Gaps = 63/507 (12%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
SN + LG+T ISLA P +D+ +T +LEK L N++E + E R E+L +L+
Sbjct: 83 SNTRTLGMTSAISLAEPKPEDIQKTTELEKALEPYNVFEEESELNHRMEILAKLNTLVKQ 142
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VH GADID LCV PR+ R D+FG
Sbjct: 143 WVRDVSISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSF 201
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L + PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N
Sbjct: 202 FELLKKQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLKNL 261
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D ++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LV
Sbjct: 262 DPKSVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAMLV 321
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR CQLYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLM
Sbjct: 322 ARTCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLM 381
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYP NS++NVS+ST ++M++EF RG +I + + ++A WD LFE +FF Y
Sbjct: 382 PIITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKA--GWDKLFEAPSFFFKY 439
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--------- 378
++++ + +++ NADD W G VES++R L L +ER+ + L H +P F
Sbjct: 440 RHFIVLLVTSNNADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTE 498
Query: 379 ----SDKSKP-LYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKP 428
SD S+ CS +F+GL+ ++ E D+ +++ F +V + L K
Sbjct: 499 RQRESDGSRASTLCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKD 554
Query: 429 GMQISVAHVTRRNLPNFVFPGGVRPSR 455
GM+I HV R+ L ++ P ++ R
Sbjct: 555 GMKIEARHVRRKQLSQYLDPNLLKRER 581
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/515 (40%), Positives = 304/515 (59%), Gaps = 45/515 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T IS A P DL++T++LE+ L+ ++ES++E R +LG+L
Sbjct: 29 LGMTSAISTAPPKPSDLLKTQELEEALKPFGVFESEQELNHRMVILGKLYSLVKQWIKDV 88
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADID LCV PRH +R DFFG +++L
Sbjct: 89 SISKNMPESVAENVGGKIYTFGSYRLGVHNRGADIDALCVAPRHISRN-DFFGSFYELLK 147
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ PEVT+L V +A VPV+K F G+ ID+L+ARL L IP+ +D+ D +L+N D++ V
Sbjct: 148 KQPEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLLLKEIPDSMDLRDDLLLKNLDQKCV 207
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+ILRLVP + NFR LR ++ WAKR G+YSN G+LGG++WA+LVAR CQ
Sbjct: 208 RSLNGCRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIYSNALGYLGGVSWAMLVARTCQ 267
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA P+ LV +FF V++QW+WP PVLL +LG VWDPR N +D+YHLMPIITP
Sbjct: 268 LYPNAAPATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITP 327
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS++NVS ST +I+M+EF+ G ++ + + ++ WD LFEP FF YK+++
Sbjct: 328 AYPQQNSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQ--TWDKLFEPPLFFMKYKHFIV 385
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS 388
+ +SAE+ +D W G VES+ R L +ER+ + L H +P F S + +CS
Sbjct: 386 LLVSAESPEDHLEWCGLVESKFRLLIGTLERNQHITL-AHINPESFSLLESQRESNTHCS 444
Query: 389 -YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 447
+F+GL+ + + FDI+ + + ++ K GM++ HV R+ L ++
Sbjct: 445 MWFIGLEFAKSENLNVNLTFDIQQFTETVQNHALNISMLKEGMKLEARHVKRKQLYQYLS 504
Query: 448 PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 482
P ++ R + T S+ + PG D
Sbjct: 505 PSLLKRERKTSITVKSQSNGTDSKKRLSDPGNSDS 539
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 287/486 (59%), Gaps = 64/486 (13%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+TEPIS + P+ DL + LE L NL+ES EE+ REEVLG+L+Q
Sbjct: 46 LGVTEPISTSPPSALDLKLSNDLENTLISFNLFESPEESRKREEVLGKLNQIVREWAKQV 105
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGP +DIDTLCVGP+H R DFF +L + L
Sbjct: 106 SIKKGYPEQTAAEVVAKIFTFGSYRLGVHGPNSDIDTLCVGPKHIMRS-DFFDDLSESLK 164
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQT 151
PE+TE V DA VPV+ FSGV IDL+YARLSL IPE+L D+ + L+N DE++
Sbjct: 165 THPEITEFTTVKDAFVPVINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDEKS 224
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
+ SLNGCRV DQIL+LVP I NFR LRC++ WA FLGGI WALL ARIC
Sbjct: 225 ILSLNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITWALLTARIC 275
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC-AIEEGSLGLQVWDPRRNPKDKYHLMPII 270
QLYPN+ PS +++RFF+VY W+WP PVLL +E G+L +VW+ +R DK HLMPI+
Sbjct: 276 QLYPNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAKR---DKAHLMPIL 332
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP MNS+YNVS ST++++ +EF RG EI +E NE+ ++ L E FF Y+ Y
Sbjct: 333 TPAYPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNES--TYNALLEKSDFFTRYRFY 390
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----KSKP-- 384
++ID SA N +D R W+GW+ES+LR L +E T M P P FS+ +S P
Sbjct: 391 IQIDCSAGNEEDHRKWEGWIESKLRFLISNLE-MTPKMKYAVPFPKSFSNLIHKESHPDQ 449
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRR 440
+ ++FMGL G + D+ V EF + + +P + I V ++ ++
Sbjct: 450 ICTTFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQYIKKK 509
Query: 441 NLPNFV 446
LP+F+
Sbjct: 510 QLPSFI 515
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/608 (38%), Positives = 330/608 (54%), Gaps = 92/608 (15%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK+Y
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA+ W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 374 IVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEE-F 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQ-------FDIR-LTVKEFKQAVSMYTLRKPGMQISVAHV 437
+ +G+ K+ EG + FDI+ T ++QA++ + M+I+ HV
Sbjct: 433 STMWVIGIVFKK----MEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKITAMHV 487
Query: 438 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 497
R+ L + A+ R H+ G R D N+D L
Sbjct: 488 KRKQLHQLL----------------PEVAIHRSKRKHSSDGV-----RAMNDSNLDLSLD 526
Query: 498 NAKCHA----TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTD 553
+ + T PS++ R SP ST +++ + +EL G EN
Sbjct: 527 SDNSMSVPSPTGPSAAKIARAPSPQGSTGTAT---------NTSELQGKTEATGENTHLA 577
Query: 554 SIRGSRNS 561
S+ G+ +S
Sbjct: 578 SVDGTSSS 585
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/562 (39%), Positives = 317/562 (56%), Gaps = 49/562 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T IS+A P D RT +L++ L+ N++ES+EE R E+L +L+
Sbjct: 28 LGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDT 87
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADID LCV PRH R D+F ++L
Sbjct: 88 SVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLK 146
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ V
Sbjct: 147 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCV 206
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQ
Sbjct: 207 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 266
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPIITP
Sbjct: 267 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITP 326
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+Y+
Sbjct: 327 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIV 384
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-Y 389
+ + A+D W G VES++R L +ER+ + L H +P F + +CS +
Sbjct: 385 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMW 443
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
F+GL + + +DI+ V + ++ K GM I V HV +R+L +V P
Sbjct: 444 FIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPS 503
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH-AT 504
++ R GT + +S + PG RKR +D N DT ++ K +
Sbjct: 504 LLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNRKR-LSDQNQDTSIKKRKVNDGE 562
Query: 505 MPSSSGEFREGSPIMSTISSSS 526
PS + +GS ++ + S
Sbjct: 563 QPSVTHHGEDGSLVVQSCGEDS 584
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/502 (42%), Positives = 300/502 (59%), Gaps = 48/502 (9%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G + GIT ISLA P + D + T+KL + ++ ++ES++E R VLG+L+
Sbjct: 14 GQQPQKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFESEDELNHRLAVLGKLNSFV 73
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PRH R DFF
Sbjct: 74 KEWIAEISESKNLPLSAVVNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFS 132
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+
Sbjct: 133 SFFEKLKRLDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLR 192
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 252
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 253 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 312
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+
Sbjct: 313 LMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQ 370
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 382
YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG + +
Sbjct: 371 KYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHN 430
Query: 383 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 437
+ + S +F+G+ K+ + + D+ ++ F V S + K GM I HV
Sbjct: 431 ENEFVSMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHV 489
Query: 438 TRRNLPNFVFPGGVRPSRPSKG 459
++ L +++ P V+ + S G
Sbjct: 490 KKKQLHHYLPPELVQRKKKSLG 511
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/562 (39%), Positives = 316/562 (56%), Gaps = 49/562 (8%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T IS+A P D RT +L++ L+ N++ES+EE R E+L +L+
Sbjct: 28 LGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQWIRDT 87
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADID LCV PRH R D+F ++L
Sbjct: 88 SVARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFTSFFELLK 146
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D++ V
Sbjct: 147 MQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQKCV 206
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR CQ
Sbjct: 207 RSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVARTCQ 266
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPIITP
Sbjct: 267 LYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITP 326
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+Y+
Sbjct: 327 AYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKHYIV 384
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYCS-Y 389
+ + A+D W G VES++R L +ER+ + L H +P F + +CS +
Sbjct: 385 LLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHCSMW 443
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
F+GL + + +DI+ V + ++ K GM I V HV +R+L +V P
Sbjct: 444 FIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPS 503
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH-AT 504
++ R GT + +S + PG RKR +D N D ++ K +
Sbjct: 504 LLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNRKR-LSDQNQDASIKKRKVNDGE 562
Query: 505 MPSSSGEFREGSPIMSTISSSS 526
PS + +GS ++ + S
Sbjct: 563 QPSVTHHGEDGSLVVQSCGEDS 584
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 322/575 (56%), Gaps = 60/575 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+
Sbjct: 19 NLRTLGMTSAISVAEPKPLDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQW 78
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VH GADID LCV PRH R D+F
Sbjct: 79 IRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFNSFF 137
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D
Sbjct: 138 ELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLD 197
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 198 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 257
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 258 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMP 317
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYP NS++NVS ST IM + F+ G I E + +A +WD LFEP FF YK
Sbjct: 318 IITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--NWDKLFEPPNFFSKYK 375
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPGDFSDKSKPLYC 387
+Y+ + + A+D W G VES++R L +ER+ + N+ +P D +C
Sbjct: 376 HYIVLLARSSTAEDQLEWCGLVESKIRHLIGTLERNPHINLAHVNPEAFPPLDPEPDKHC 435
Query: 388 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
S +F+GL + + +DI+ V+ ++ + K GM I HV R++L +V
Sbjct: 436 SMWFIGLLFAKSENLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYV 495
Query: 447 FPGGVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH 502
P ++ R G ++ +S + PG GRKR +D +D
Sbjct: 496 SPSLLKKERKVSGGVHRNGSIAGNGNSGSVSPRNPGDTTGRKR-LSDQGID--------- 545
Query: 503 ATMPSSSGEFREGSPIMSTISSSSINLQFEHMDAN 537
+ G+ R + + + +SSI +Q D+N
Sbjct: 546 -----ACGKKRRVNEVEEQVENSSIVVQSCGEDSN 575
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/535 (40%), Positives = 305/535 (57%), Gaps = 54/535 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N + LG+T IS+A P DL RT +L++ L+ N++ES+EE R E+L +L+
Sbjct: 23 NLRTLGMTSAISVAEPKPSDLTRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQW 82
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VH GADID LCV PRH R D+F
Sbjct: 83 IRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFSSFF 141
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D
Sbjct: 142 DLLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLD 201
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 202 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 261
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 262 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMP 321
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK
Sbjct: 322 IITPAYPQQNSTFNVSVSTRTIMQEAFETGLSITEEIIMGKA--TWDKLFEPPNFFGKYK 379
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL--- 385
+Y+ + + +A+D W G VES++R L +ER+ + L H +P F PL
Sbjct: 380 HYIVLLARSLSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFP----PLEPE 434
Query: 386 ---YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 441
+CS +F+GL + + +DI+ V ++ ++ K GM I HV R++
Sbjct: 435 PEGHCSMWFIGLLFAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKD 494
Query: 442 LPNFVFPGGVRPSRPSKGT---WDSRRALERKVSSHTKPGADDGRKRKQTDDNVD 493
L +V P +R R G+ + S + AD +++ +D N D
Sbjct: 495 LHTYVSPSLLRRERKVSGSVHKNGNIAGNGNNGSVSPRNQADAANRKRGSDQNAD 549
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 293/491 (59%), Gaps = 49/491 (9%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G + + GIT ISLA P + D T+KL ++ ++E +EE R VLG+L+
Sbjct: 11 GQQSQKHYGITSAISLAPPREIDHHYTKKLCDAMQPFGVFEDEEELNHRLAVLGKLNNFV 70
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PRH R DFF
Sbjct: 71 KEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQ 129
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+
Sbjct: 130 SFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILK 189
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 249
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 250 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 309
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP FF+
Sbjct: 310 LMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWSKLFEPPHFFQ 367
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 382
YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG +++
Sbjct: 368 KYKHYIVLAASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRN 427
Query: 383 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 437
+ + S +F+G+ K+ + E D+ ++ F V + + K GM+I HV
Sbjct: 428 ENDFVSMWFIGIIFKK-MENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHV 486
Query: 438 TRRNLPNFVFP 448
++ L N P
Sbjct: 487 KKKQL-NLYLP 496
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/489 (43%), Positives = 286/489 (58%), Gaps = 48/489 (9%)
Query: 1 MGSSNG---QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL 57
+GS+ G + LG+T IS A P DL RT +LE+ LR L+ES+EE R EVL ++
Sbjct: 29 IGSATGIVDKTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKI 88
Query: 58 DQ------------------------------------VHGPGADIDTLCVGPRHATREE 81
+Q VH GADIDTLCV PRH R
Sbjct: 89 NQLVKKWIYEVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS- 147
Query: 82 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
DFF ++L + EV +L V +A VPV+K F G+ +D+L+ARL+L IPED D+
Sbjct: 148 DFFASFVELLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDV 207
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+IL+N D++ VRSLNGCRVTD+IL LVP + FR LR ++ WAKR GVYSNV G+LGG+
Sbjct: 208 NILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGV 267
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
+WA+LVAR CQLYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N
Sbjct: 268 SWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVA 327
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP NS++NVS STL IM EF++G I + + + DW LFEP
Sbjct: 328 DRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRS--DWMKLFEPP 385
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
FF YK+++ + S ++ + W G VES++R L +ERH Y + H +P F
Sbjct: 386 NFFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESFP-P 443
Query: 382 SKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 437
S+P L +F+GLQ + V +D R V K+ + + K M++ + +V
Sbjct: 444 SEPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYV 503
Query: 438 TRRNLPNFV 446
RR L ++
Sbjct: 504 RRRELVRYL 512
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/502 (42%), Positives = 299/502 (59%), Gaps = 48/502 (9%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G + GIT ISLA P + D + T+KL + ++ ++E ++E R VLG+L+
Sbjct: 14 GQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFV 73
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PRH R DFF
Sbjct: 74 KEWISEISESKNLPPSAVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFS 132
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
+ L E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+
Sbjct: 133 SFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLR 192
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 252
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 253 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 312
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+
Sbjct: 313 LMPIITPAYPQQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQ 370
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 382
Y++Y+ + SA ++ W G VES++R L +ER+ Y + +P PG +++
Sbjct: 371 QYRHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRN 430
Query: 383 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 437
+ + S +F+G+ K+ + + D+ ++ F V S + K GM I HV
Sbjct: 431 ENDFVSMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHV 489
Query: 438 TRRNLPNFVFPGGVRPSRPSKG 459
++ L +++ P V+ + S G
Sbjct: 490 KKKQLHHYLPPELVQRKKKSLG 511
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/287 (65%), Positives = 214/287 (74%), Gaps = 36/287 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+R GIT+PIS+AGPT+ DL R +LEK+L D L ES++E + REEVLGR+DQ
Sbjct: 1 KRYGITKPISVAGPTEPDLHRNAELEKFLVDSGLNESKDETIKREEVLGRIDQIVKDWVK 60
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPGADIDTLCVGP + REEDFF LH
Sbjct: 61 QLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFITLHDK 120
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L DEQ
Sbjct: 121 LAETEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQ 180
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 181 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 240
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPR
Sbjct: 241 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/475 (44%), Positives = 286/475 (60%), Gaps = 52/475 (10%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------------- 59
IS A PT DL + + + L+ N + S EE REEVL +LD
Sbjct: 7 ISAALPTQKDLTNSEAIMEILKKENRFPSDEENKKREEVLAKLDGIIKGWVKQVCLKQGL 66
Query: 60 ---------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 98
VHGPGADIDTLC+ P + + F +LH +L PE+
Sbjct: 67 SEEFVSSAGSKLVTFGSFRLGVHGPGADIDTLCIVP-NMVEKHHCFTDLHDILKLRPEIA 125
Query: 99 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 158
EL PVPDA+VP++ F GV IDLL+ARLS VIP DLDI +S L++AD++T RSLNG
Sbjct: 126 ELKPVPDAYVPLITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADDETQRSLNGP 185
Query: 159 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 218
RV DQIL+LVP +NFRTTLRC++ WA RR +Y N+ G+LGG+ +A+L A+ICQ+YPNA
Sbjct: 186 RVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAKICQMYPNAA 245
Query: 219 PSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 277
PS L+++FF VY QW W PVLL IEEG+L +VW+P+ NP+DK HLMPIITP+YPCM
Sbjct: 246 PSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYPCM 305
Query: 278 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 337
NS++NVS +TL+ M +EF+RG I + E +W+TLFE FF Y NYL+++I+
Sbjct: 306 NSTFNVSKTTLKDMKNEFERGASITQKAENGLE--NWETLFEATDFFVRYSNYLQVEINT 363
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF-MGLQRK 396
N D W G+++S++R L K+E L H +P F + + SYF +GL+ K
Sbjct: 364 SNEVDHLKWIGFIQSKVRFLIPKLE--AVPGLTIHIYPDYFHNNQGGAFSSYFYIGLEYK 421
Query: 397 QGVPVGEGEQFDIRLTVKEFKQAVSM----YTLRKPGMQISVAHVTRRNLPNFVF 447
Q P GEG ++ + EF++ ++ + KP +Q + R +P FV
Sbjct: 422 QTKP-GEGSVVNLASCIAEFEELLTWPDKNENMEKPKIQ----PIKRNAIPEFVI 471
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/495 (42%), Positives = 293/495 (59%), Gaps = 43/495 (8%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
+N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+
Sbjct: 22 NNLRTLGMTSAISVAEPKPIDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQ 81
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VH GADID LCV PRH R D+F
Sbjct: 82 WIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFATF 140
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N
Sbjct: 141 FELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNL 200
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LV
Sbjct: 201 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLV 260
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLM
Sbjct: 261 ARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLM 320
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF Y
Sbjct: 321 PIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIIGKA--TWDKLFEPPNFFGKY 378
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPL 385
K+Y+ + + +A+D W G VES++R L +ER+ + L H +P F D
Sbjct: 379 KHYIVLLARSSSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGK 437
Query: 386 YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
+CS +F+GL + + +DI+ V+ ++ ++ K GM I HV R++L
Sbjct: 438 HCSMWFIGLSFAKSESLNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHT 497
Query: 445 FVFPGGVRPSRPSKG 459
+V V+ R G
Sbjct: 498 YVSSSLVKRERKVSG 512
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/498 (40%), Positives = 298/498 (59%), Gaps = 58/498 (11%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T ISLA P +D +T +L+K L N++E + E R E+L +L+
Sbjct: 32 LGMTSAISLAEPKPEDHTKTVELQKALEPYNVFEDESELNHRMEILSKLNTLVKQWVRDV 91
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADID LCV PR+ R+ D+FG ++L
Sbjct: 92 SISKNMPEALAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERQ-DYFGSFFELLK 150
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D ++V
Sbjct: 151 KQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDPKSV 210
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LVAR CQ
Sbjct: 211 RSLNGCRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQ 270
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITP
Sbjct: 271 LYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITP 330
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS++NVS+ST ++M++EF RG +I + + +A WD LFE +FF Y++++
Sbjct: 331 AYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRHFIV 388
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHP---------HPGDFSDKS 382
+ +++ NADD W G VES++R L +ER+ + N+ +P D +
Sbjct: 389 LLVTSNNADDHLEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQKDDGGEGG 448
Query: 383 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHV 437
K CS +F+GL+ ++ E D+ +++ F AV + + K GM+I HV
Sbjct: 449 KTTLCSLWFIGLEFER----SENLNVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEARHV 504
Query: 438 TRRNLPNFVFPGGVRPSR 455
R+ L ++ P ++ R
Sbjct: 505 RRKQLNQYLDPNLLKRER 522
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/489 (42%), Positives = 292/489 (59%), Gaps = 48/489 (9%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G + GIT ISLA P + D + T+KL + ++ ++E ++E R VLG+L+
Sbjct: 14 GQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELNHRLAVLGKLNSFV 73
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PRH R DFF
Sbjct: 74 KEWIAEISDSKNLPPSSVTNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHIERT-DFFS 132
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
+ L E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+
Sbjct: 133 SFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLR 192
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 193 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 252
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YH
Sbjct: 253 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYH 312
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+
Sbjct: 313 LMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQ 370
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKS 382
YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG + +
Sbjct: 371 KYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHN 430
Query: 383 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 437
+ + S +F+G+ K+ + + D+ ++ F V S + K GM I HV
Sbjct: 431 ENEFVSMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHV 489
Query: 438 TRRNLPNFV 446
++ L +++
Sbjct: 490 KKKQLHHYL 498
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/484 (43%), Positives = 292/484 (60%), Gaps = 54/484 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISL+ PT D+ KL L+ N+++++E R VLG+L++
Sbjct: 8 GITSPISLSEPTKFDIDLNVKLVNTLKPYNVFDTEEGLTHRMVVLGKLNKLVKEWIKQVS 67
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHG GADIDTLCV PRH R DFF +++L +
Sbjct: 68 LAKNMPPAIAETVGGKIYTFGSYRLGVHGAGADIDTLCVAPRHVDRS-DFFSSFYEILKD 126
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
E T++ V +A VPV+K F GV +D+L+ARL+L +PED D+ ++ +L+N D++ VR
Sbjct: 127 QKETTDIRGVEEAFVPVIKLDFDGVELDILFARLALPQVPEDQDLREEVLLKNLDQRCVR 186
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD++L LVP +NFR LR ++ WAKRRGVYSNV GFLGG++WA+LVAR CQL
Sbjct: 187 SLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLVARTCQL 246
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITP 272
YPNA+ S L+ +FF V+++W WP PVLL I+E + LG QVWDPR NP D++HLMPIITP
Sbjct: 247 YPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPIITP 306
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS+YNVS ST IM +EF+ G ++ + E E WD LFEP +FF YK+Y+
Sbjct: 307 AYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQ--EIFEGKATWDKLFEPGSFFGKYKHYIV 364
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPLYCSY 389
+ SA + + W G VES++R L +ER Y L H +P + + + ++
Sbjct: 365 LSTSATSKEHHLEWVGLVESKVRILIGNLERTAYIAL-AHVNPKQYPPLNPQEDVFVTNW 423
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPN 444
F+GLQ + EG D+ ++ F +QA+S TL K GM+I V R+ L
Sbjct: 424 FIGLQFNK----IEGGNIDLTFEIQSFTDTVHRQAISNGTL-KEGMKIEARSVRRKQLGE 478
Query: 445 FVFP 448
++ P
Sbjct: 479 YLPP 482
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/489 (43%), Positives = 286/489 (58%), Gaps = 48/489 (9%)
Query: 1 MGSSNG---QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL 57
+GS+ G + LG+T IS A P DL RT +LE+ LR L+ES+EE R EVL ++
Sbjct: 80 IGSATGIVDKTLGMTSAISTAPPKPSDLQRTDELEETLRQFGLFESEEELAHRMEVLSKI 139
Query: 58 DQ------------------------------------VHGPGADIDTLCVGPRHATREE 81
+Q VH GADIDTLCV PRH R
Sbjct: 140 NQLVKKWIYEVSIKKNMPSSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHIERS- 198
Query: 82 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
DFF ++L + EV +L V +A VPV+K F G+ +D+L+ARL+L IPED D+
Sbjct: 199 DFFASFVELLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDV 258
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+IL+N D++ VRSLNGCRVTD+IL LVP + FR LR ++ WAKR GVYSNV G+LGG+
Sbjct: 259 NILKNLDQKCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGV 318
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
+WA+LVAR CQLYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N
Sbjct: 319 SWAMLVARTCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVA 378
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP NS++NVS STL IM EF++G I + + + DW LFEP
Sbjct: 379 DRFHLMPIITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRS--DWMKLFEPP 436
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
FF YK+++ + S ++ + W G VES++R L +ERH Y + H +P F
Sbjct: 437 NFFGKYKHFIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESFP-P 494
Query: 382 SKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 437
S+P L +F+GLQ + V +D R V K+ + + K M++ + +V
Sbjct: 495 SEPEGDKLQSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYV 554
Query: 438 TRRNLPNFV 446
RR L ++
Sbjct: 555 RRRELVRYL 563
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/500 (40%), Positives = 303/500 (60%), Gaps = 60/500 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T IS A P +D+ +T++LEK L N++E++EE R E+L +L+
Sbjct: 22 LGMTSAISTAEPKPEDIQKTKELEKSLEPFNVFEAEEELNHRMEILAKLNTLVKQWVRDV 81
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADID LCV PR+ R D+FG ++L
Sbjct: 82 SISKNMPEAMAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFGSFFELLK 140
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D+++V
Sbjct: 141 QQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQKSV 200
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+ILRLVP I NFR LR ++ WAKR G+YSN G+ GG++WA+LVAR CQ
Sbjct: 201 RSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVSWAMLVARTCQ 260
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITP
Sbjct: 261 LYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITP 320
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS++NVS+ST ++M+ EF RG +I + + + W+ LFE +FF Y++++
Sbjct: 321 AYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQ--MWEKLFEAPSFFYRYRHFIV 378
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPGDFSDKS--------- 382
+ +++ NADD W G VES++R L +ER+ + N+ +P + +++
Sbjct: 379 LLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNSATTLNGAD 438
Query: 383 -KPL-YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVA 435
KP +CS +F+GL+ ++ E D+ +++ F +V + L K GM+I
Sbjct: 439 GKPTPFCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEAR 494
Query: 436 HVTRRNLPNFVFPGGVRPSR 455
HV R+ L ++ P ++ R
Sbjct: 495 HVRRKQLTQYLDPNLLKRER 514
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/558 (39%), Positives = 310/558 (55%), Gaps = 80/558 (14%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M ++NG LG+T PIS + D + T L + LR +E++EEA +RE VLGRL V
Sbjct: 1 MSTTNGA-LGVTPPISTSESNDREKEVTTTLMEELRRQGTFETEEEAKTREIVLGRLAAV 59
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
HGPG+DIDTLCV P+H TRE DFF
Sbjct: 60 VKKFVRRVSLANGMSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFF 118
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
L +ML E VTE+ VP+A+VP++K K +G+ IDL ARL+L IP+DL + D++L
Sbjct: 119 DVLEEMLKETEGVTEVSGVPEAYVPIIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLL 178
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCVRSLNGSRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+
Sbjct: 239 MLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRA 298
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NV+ ST IM +EF++G EI + + A +W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTA--EWSELFAKHDFF 356
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
++ YL++ S N+D W G VESR+RQL +K+E + +++ HP F S
Sbjct: 357 HKHRYYLQVIASTGNSDLQIKWSGTVESRIRQLVMKLE-YVESLILAHPFIKGFEQVSHC 415
Query: 385 L-----------------------------------YCSYFMGLQRKQGVPVGEG-EQFD 408
+ ++++GL + +P G + D
Sbjct: 416 ISSEEVRAVAQGEVSEAVSKRRKEDIEGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKLD 475
Query: 409 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRAL 467
I EF + V M+ + M I V H+ LP++V+ G R R ++ S +
Sbjct: 476 ISYPTTEFTKLVKMWEKYDEAKMGIIVRHIKSTALPDYVYDEGERQPRSAQKRVKSGKGS 535
Query: 468 ERKVSSHTKPGADDGRKR 485
++ S+ T P + ++R
Sbjct: 536 DK--SNGTSPDMPNKKRR 551
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/494 (42%), Positives = 289/494 (58%), Gaps = 43/494 (8%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N + LG+T IS+A P D RT +L++ L+ N++ES+ E R E+L +L+
Sbjct: 24 NLRTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQW 83
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VH GADID LCV PRH R D+F
Sbjct: 84 IRDTSIARNMPSSVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFF 142
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L EVT+L V +A VPV+K F G+ ID+L+A+LSL IP+ +D+ D +L+N D
Sbjct: 143 ELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLD 202
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 203 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 262
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 263 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMP 322
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK
Sbjct: 323 IITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYK 380
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-Y 386
+Y+ + + A+D W G VES++R L +ER+ + L H +P F K +P +
Sbjct: 381 HYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGH 439
Query: 387 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
CS +F+GL + + +DI+ V + L K GM I HV R++L +
Sbjct: 440 CSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTY 499
Query: 446 VFPGGVRPSRPSKG 459
V P ++ R G
Sbjct: 500 VSPSLLKRERKISG 513
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/494 (42%), Positives = 289/494 (58%), Gaps = 43/494 (8%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N + LG+T IS+A P D RT +L++ L+ N++ES+ E R E+L +L+
Sbjct: 20 NLRTLGMTSAISVAEPKPSDFTRTNELKEALKPYNVFESEAELNHRMEILSKLNTLVKQW 79
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VH GADID LCV PRH R D+F
Sbjct: 80 IRDTSIARNMPSSVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRS-DYFASFF 138
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L EVT+L V +A VPV+K F G+ ID+L+A+LSL IP+ +D+ D +L+N D
Sbjct: 139 ELLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLD 198
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVA
Sbjct: 199 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVA 258
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 259 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMP 318
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK
Sbjct: 319 IITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYK 376
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-Y 386
+Y+ + + A+D W G VES++R L +ER+ + L H +P F K +P +
Sbjct: 377 HYIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGH 435
Query: 387 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
CS +F+GL + + +DI+ V + L K GM I HV R++L +
Sbjct: 436 CSMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTY 495
Query: 446 VFPGGVRPSRPSKG 459
V P ++ R G
Sbjct: 496 VSPSLLKRERKISG 509
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 290/504 (57%), Gaps = 51/504 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISL GP DL + KLE+ +R ++ES+EE R +VL +++
Sbjct: 18 GITSPISLEGPKPVDLKLSEKLEEAMRPHGVFESEEEMSHRMDVLHKINTLVREWIKDVS 77
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADIDTLCV PRH R DFF ++L
Sbjct: 78 RQKNNYPEDKIDAFGGKVCTFGSYRLGVHTKGADIDTLCVAPRHVDRS-DFFSSFFEILK 136
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
PEV +L V +A VPV+K F G+ +D+L+ARL+L IPE++D+ +S+L+N +E+ V
Sbjct: 137 NTPEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALPQIPEEIDLRDESLLKNLNEKCV 196
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+IL LVP +FR TLR ++ WAK++G+YSN GFLGG++WA+LVAR+CQ
Sbjct: 197 RSLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGVSWAMLVARVCQ 256
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPI 269
LYPNA P+ L+ +FF + +W WP PVLL A+ + +L VWDPR N D++HLMPI
Sbjct: 257 LYPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPI 316
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP NS++NV+ ST IM +E + G EI + E +W LFEP FF+ YK+
Sbjct: 317 ITPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKI--YEGREEWGALFEPSNFFQKYKH 374
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKPLYC 387
Y+ + SA D W G+VES++R L +ER+ + HP P G ++ C
Sbjct: 375 YIVLTASAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDGEYLC 434
Query: 388 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVAHVTRRNLP 443
+F+GL + + + D+ ++ F V + L K GM++ + HV RR L
Sbjct: 435 RWFIGLTFVKI--ENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRRQLD 492
Query: 444 NFVFPGGVRPSRPSKGTWDSRRAL 467
+V P + S+ + + R ++
Sbjct: 493 LYVPPKILLQSKRAAVAQEHRSSI 516
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/520 (40%), Positives = 297/520 (57%), Gaps = 77/520 (14%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++LGIT ISLA P +DL RT +L K L N++E+QEE R E+L +L+
Sbjct: 26 KQLGITSAISLAEPRAEDLQRTEELSKSLEPYNVFETQEELNHRMEILAKLNTLVKQWVK 85
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PR+ R D+F ++
Sbjct: 86 DISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERS-DYFQSFFEI 144
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + PEVTE V +A VPV+K F GV IDLL+ARLSL IP+D D+ D++L+N D +
Sbjct: 145 LKKQPEVTECRSVEEAFVPVIKMNFDGVEIDLLFARLSLKEIPDDFDLRDDNLLKNLDPR 204
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+VRSLNGCRVTD+IL LVP I+NFR LR ++ WAKR G+YSN G+ GG+ WA+LVAR
Sbjct: 205 SVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGVTWAMLVART 264
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA + LV +FF V+++W+WPNPVLL ++ +L QVWDPR N D+YHLMPII
Sbjct: 265 CQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPII 324
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS++NVS ST ++++ EF RG I + E V WD LFE +FF Y+++
Sbjct: 325 TPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVGWDRLFEAPSFFYRYRHF 382
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------- 381
+ + ++++ ADD W G VES++R L +ER + +L H +P F K
Sbjct: 383 IVLLVNSQTADDHLEWCGLVESKVRLLIGNLERIPHIVL-AHVNPKCFELKKGAATANNS 441
Query: 382 -------------------SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 421
+ YCS +F+GL+ ++ E D+ +++ F + V+
Sbjct: 442 QNNSGNEDDLKQQSAQAAVTTAPYCSLWFIGLEFER----SENLNIDLTESIQNFTEHVN 497
Query: 422 MY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 457
M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 498 MHGVNIKMLKEGMSIVARHVKRKQLSVYLDADFLKRERKS 537
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/526 (41%), Positives = 309/526 (58%), Gaps = 58/526 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PISLA P+D D + T+KL + ++ ++E QEE R VLG+L+
Sbjct: 20 GLTSPISLAPPSDKDHIHTQKLIEAMKPFGVFEDQEELYHRTTVLGKLNNFVREWILELA 79
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH G+DID LCV P H R DFF + L
Sbjct: 80 ESKNLPPSITEQVGGKIFTFGSYRLGVHTKGSDIDALCVAPSHVERS-DFFQSFFEKLKN 138
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV L + DA+VPV+KF+F G+ IDL++A+LSL + +DLD+ DS L++ D + +R
Sbjct: 139 QEEVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSDDLDLRDDSCLKSLDIRCIR 198
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RVTD+ILRLVP ++NFR TLR ++ WAKRRGVYSN+ GFLGG++WA+LVARICQL
Sbjct: 199 SLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSWAMLVARICQL 258
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S L+++FF ++++W WP PVLL +EE L L VWDPR NP D+YH+MPIITPA
Sbjct: 259 YPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPA 318
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EFQRG E+ + + K ++ DW LFEP FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKS--DWSKLFEPLNFFQKYKHYIVL 376
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERH---TYNMLQCHPHPGDFSDKSKPLYCS-Y 389
SA + NW G V+S++R L +ER+ T +Q PG+ + Y S +
Sbjct: 377 TASAFTEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYKQNAYVSMW 436
Query: 390 FMGLQRKQG-------VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 442
F+GL K+ V + G Q T ++QA ++ L K GM+I +V R+ L
Sbjct: 437 FLGLVFKKAESAVKTNVDLTHGIQ---SFTDTVYRQASALNIL-KEGMKIEATYVKRKQL 492
Query: 443 PNFVFPGGVRPSRPSKGTWD---SRRALERKVSSHTKPGADDGRKR 485
++ P G R + D + L+ K SS + +D + R
Sbjct: 493 -HYFLPAGTLQKRKKQRVSDISQNNSGLQCKRSSLGESCSDGSKDR 537
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/505 (41%), Positives = 296/505 (58%), Gaps = 52/505 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
+N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+
Sbjct: 20 NNLRTLGMTSAISVAEPKPMDISRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQ 79
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VH GADID LCV PRH R+ D+F
Sbjct: 80 WIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRQ-DYFTSF 138
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N
Sbjct: 139 FDLLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNL 198
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LV
Sbjct: 199 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLV 258
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLM
Sbjct: 259 ARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLM 318
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF Y
Sbjct: 319 PIITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKY 376
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPL 385
K+Y+ + + +A+D W G VES++R L +ER+ + L H +P F +
Sbjct: 377 KHYIVLLAKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGK 435
Query: 386 YCS-YFMGL-----QRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVA 435
+CS +F+GL ++ + GE D+ +K F V + K GM I
Sbjct: 436 HCSMWFIGLAFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAK 495
Query: 436 HVTRRNLPNFVFPGGVRPSRPSKGT 460
HV R++L +V P ++ R ++ T
Sbjct: 496 HVKRKDLHTYVSPSLLKKERKAENT 520
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/531 (40%), Positives = 294/531 (55%), Gaps = 84/531 (15%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M S+NGQ+ G+T+PIS + TD + T + LR +ES+EEA +RE VLGR+
Sbjct: 1 MTSTNGQQQWGVTQPISSSESTDAEKKVTVAMMDELRRQGTFESEEEARTRELVLGRVAT 60
Query: 60 ------------------------------------VHGPGADIDTLCVGPRHATREEDF 83
VHGPG+DIDTLCV P+H +RE DF
Sbjct: 61 LVKKFVHKVALSRGLSESAAAAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DF 119
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F ML E+ V+E+ VP+A+VP++K K G+ ID L ARL+L IP+DL + D++
Sbjct: 120 FEVFEPMLREVEGVSEVSGVPEAYVPIIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNL 179
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+N DE+ +RSLNG RVTD+ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ W
Sbjct: 180 LKNLDERCIRSLNGSRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAW 239
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVARICQLYPNAV +VSRFF + QW WP PVLL IEEG L ++VW+PR P D+
Sbjct: 240 AMLVARICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDR 299
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
H MPIITPAYP M +++NV+ ST IM +EF+RG +I + + + W LF F
Sbjct: 300 SHRMPIITPAYPAMCATHNVTESTQMIMTEEFKRGADIVDKIVF--GSLQWSALFAKHDF 357
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK 383
F Y+ YL+I S N D W G VESR+RQL +K+E + + HP F +
Sbjct: 358 FHKYRYYLQIIASTGNPDLQIKWAGTVESRIRQLVMKLE-YVDALTLAHPFIKGF---DQ 413
Query: 384 PLYC--------------------------------------SYFMGLQRKQGVPVGEG- 404
L+C ++F+GL + P G
Sbjct: 414 TLHCLNDEEVRLCASGEVPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGP 473
Query: 405 EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPS 454
+ DI EF + V M+ + M I V H+ +LP++VF G +P+
Sbjct: 474 RRLDISYPTTEFTKLVKMWDKYDESSMGIVVRHIKNSSLPDYVFEEGAKPN 524
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/488 (42%), Positives = 287/488 (58%), Gaps = 59/488 (12%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------------- 59
+ L PTD D+ RT LEK+ D L +++E R VL +L+Q
Sbjct: 47 VFLDSPTDIDIARTHALEKFQIDAELILTEKEEAKRRSVLAQLEQIVKRWARRVTWQRGL 106
Query: 60 ---------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVT 98
VHGP ADID LCVGP +AT E+DFF L+ ML + EV+
Sbjct: 107 PKDLKESSNAKIFTFGSYQLGVHGPEADIDALCVGPCYATLEDDFFIVLYNMLKKTAEVS 166
Query: 99 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 158
E+ V A+VP+M+FKFSG+SIDLLYARLSL IPED+DI + +L+N D+ TV+SLNGC
Sbjct: 167 EVQCVKSANVPLMRFKFSGISIDLLYARLSLRTIPEDMDILDEKLLENLDDTTVKSLNGC 226
Query: 159 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 218
RVT +IL+LVPKI+NFR+TLRC++FWAKRRG+YS++ GFLGGI+WA+LVAR+CQ++PNA
Sbjct: 227 RVTARILQLVPKIENFRSTLRCIKFWAKRRGIYSHIFGFLGGIHWAVLVARVCQMFPNAT 286
Query: 219 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 278
SMLVSRFF +Y W+WP PV L + + D++H MPII P +P
Sbjct: 287 VSMLVSRFFWIYAHWQWPTPVTLVETQPD---------HADGSDRHHHMPIIIPVHPYSC 337
Query: 279 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV----DWDTLFEPFTFFEAYKNYLRID 334
SYNV+ STL+ + EF RG + ME + DW+ LFE F F +Y+ +++I
Sbjct: 338 CSYNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIY 397
Query: 335 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCSYFMGL 393
++A + DD R+W+GWVESR R L LK E+ C P+P + DK+ K +C + GL
Sbjct: 398 VTASDEDDFRSWRGWVESRFRHLLLKFEKLP---AYCDPNPYPYFDKNVKEPHCYFLWGL 454
Query: 394 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
+ ++ + V + D EF+ +S +PG + + + R LP+F
Sbjct: 455 KLRKNISVDMADLED------EFRLYLSNGYEGRPGCDVHLTLLNRFQLPSFANSKSSEL 508
Query: 454 SRPSKGTW 461
+ SK W
Sbjct: 509 RQHSKPYW 516
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 291/492 (59%), Gaps = 51/492 (10%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
+ S + QR GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 10 LDSQHQQRHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNN 69
Query: 60 ------------------------------------VHGPGADIDTLCVGPRHATREEDF 83
VH GADID LCV PRH R DF
Sbjct: 70 LVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DF 128
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F + L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS
Sbjct: 129 FQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSR 188
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L++ D + +RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++W
Sbjct: 189 LRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSW 248
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 249 AMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDR 308
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP F
Sbjct: 309 YHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNF 366
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----- 378
F+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P F
Sbjct: 367 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 425
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISV 434
+K+ +F+G+ ++ V EG D+ ++ F V ++ + K GM+I
Sbjct: 426 HNKANNYVSMWFLGIIFRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEA 484
Query: 435 AHVTRRNLPNFV 446
HV ++ L +++
Sbjct: 485 THVKKKQLHHYL 496
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/488 (43%), Positives = 286/488 (58%), Gaps = 56/488 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLAGP D D + T+KL + +R ++E E R VLG+L+
Sbjct: 16 KHYGITSPISLAGPKDTDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIG 75
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID+LCV PRH R DFF +
Sbjct: 76 ELGEQKSLPPSIISAVGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQSFSEK 134
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + + L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D +
Sbjct: 135 LKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIR 194
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPII
Sbjct: 255 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPII 314
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y
Sbjct: 315 TPAYPQQNSTYNVSISTRSVMVEEFKQGLSVTDEILLGRC--DWSKLFEPPNFFHKYKHY 372
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 385
+ + SA + W G VES++R L +ER+++ L H +P F K
Sbjct: 373 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEY 431
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVT 438
+F+G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV
Sbjct: 432 VSMWFLGIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMRIEATHVK 487
Query: 439 RRNLPNFV 446
R+ L +++
Sbjct: 488 RKQLHHYL 495
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/500 (41%), Positives = 291/500 (58%), Gaps = 52/500 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
+N + LG+T IS+A P D+ RT +L++ L+ N++ES+EE R E+L +L+
Sbjct: 10 NNLRTLGMTSAISVAEPKPMDIARTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQ 69
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VH GADID LCV PRH R D+F
Sbjct: 70 WIRDTSIARNMPPNVAEQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHIYRA-DYFTSF 128
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N
Sbjct: 129 FDLLRMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNL 188
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LV
Sbjct: 189 DQKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLV 248
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLM
Sbjct: 249 ARTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLM 308
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF Y
Sbjct: 309 PIITPAYPQQNSTFNVSISTRTIMQEAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKY 366
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPL 385
K+Y+ + + A+D W G VES++R L +ER+ + L H +P F +
Sbjct: 367 KHYIVLLAKSLTAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGK 425
Query: 386 YCS-YFMGL-----QRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVA 435
+CS +F+GL ++ + GE D+ +K F V + K GM I
Sbjct: 426 HCSMWFIGLSFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAK 485
Query: 436 HVTRRNLPNFVFPGGVRPSR 455
HV R++L +V P ++ R
Sbjct: 486 HVKRKDLNTYVSPSLLKRER 505
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 291/492 (59%), Gaps = 51/492 (10%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
+ S + QR GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 2 LDSQHQQRHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNN 61
Query: 60 ------------------------------------VHGPGADIDTLCVGPRHATREEDF 83
VH GADID LCV PRH R DF
Sbjct: 62 LVKEWISDISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DF 120
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F + L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS
Sbjct: 121 FQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSR 180
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L++ D + +RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++W
Sbjct: 181 LRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSW 240
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 241 AMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDR 300
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP F
Sbjct: 301 YHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNF 358
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----- 378
F+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P F
Sbjct: 359 FQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKE 417
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISV 434
+K+ +F+G+ ++ V EG D+ ++ F V ++ + K GM+I
Sbjct: 418 HNKANNYVSMWFLGIIFRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEA 476
Query: 435 AHVTRRNLPNFV 446
HV ++ L +++
Sbjct: 477 THVKKKQLHHYL 488
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/513 (42%), Positives = 290/513 (56%), Gaps = 83/513 (16%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----------- 58
G+T PIS+ GPT + + T L L++ +ES EEA +RE VLGRL+
Sbjct: 4 GVTGPISINGPTRAEELSTTALMDELKERRTFESPEEARARELVLGRLNLLVKEFVIKVS 63
Query: 59 -------------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPG+DIDTLCV PR TRE FF L QML E
Sbjct: 64 LALGMSDHVARETGGKIFTFGSYRLGVHGPGSDIDTLCVVPRQVTREH-FFEILPQMLKE 122
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PEVTEL VP+A VP++ KFSG+ +DLL+ARL+L +P+DL++ D++L+N D++ VR
Sbjct: 123 RPEVTELSTVPEAFVPIISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDDRCVR 182
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SL G RVTD+ILRLVP ++ FR +LR ++ WAK R VYSNV GF GG+ WA+ AR+CQL
Sbjct: 183 SLGGSRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTARVCQL 242
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIIT 271
YPN + +V+RFF V +QW WP+PVLL AI G +G Q VW+P+ P+D+ H MPIIT
Sbjct: 243 YPNKPAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIIT 302
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYPCM S++NV+ ST ++MM EF+RG + +A+ A W LFE FF Y+NY+
Sbjct: 303 PAYPCMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSA--QWSALFEKHDFFTRYRNYI 360
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKPL----- 385
+I S+ AD W G VESRLR L LK+E T +M HP FS+ + L
Sbjct: 361 QITASSPEADAHLKWAGTVESRLRLLVLKVEEIETVDM--AHPFIKGFSNTTYALNRQEV 418
Query: 386 ------------------------------YCSYFMGLQRKQGVPVGE--GEQFDIRLTV 413
CS+F+GL PVG + DI V
Sbjct: 419 SLVQGGDMPNEIASRIPEDYENRADVEVVHTCSFFVGLLVHPK-PVGHVGPRKLDITYPV 477
Query: 414 KEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNF 445
EF + V + + M ISV H+ + P+F
Sbjct: 478 GEFTRMVKQWEGYSEDKMSISVRHIKKSVYPSF 510
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/486 (41%), Positives = 283/486 (58%), Gaps = 46/486 (9%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S G+ GIT PISLA PT+ D + T KL +++ ++ES+ E +R VLG+L++
Sbjct: 3 SGGKTYGITSPISLAEPTEKDRVLTEKLIEHIEPYGVFESESEHSARRIVLGKLNEIVKE 62
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
V GADIDTLCV PRH R DFF
Sbjct: 63 FVMNVSEERKLPQSLIDTAGGKLYTFGSYRLGVCAKGADIDTLCVVPRHVNRS-DFFSVF 121
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E EV+EL + DA VPV+K KF GV ID+L++RL+L V+P D D+ DS+L+N
Sbjct: 122 CTLLKERSEVSELRAIEDAFVPVIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNL 181
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D + +RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR+G+YSN+ G+LGG++WA+LV
Sbjct: 182 DIRCIRSLNGCRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLV 241
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHL 266
AR CQLYPNA+ S LV RFF V++QW WP PVLL EE +L L VWDPR NP D+ HL
Sbjct: 242 ARTCQLYPNAIASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHL 301
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYP NS+YNV+ S+L +M EF G+ + + +N++ W L E FF
Sbjct: 302 MPIITPAYPQQNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKS--SWLKLLETPNFFNE 359
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDK 381
YK+++ + SAE+ ++ W G VES++R L +ER+ Y ++ +P D
Sbjct: 360 YKHFIVLMASAESQENFNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDV 419
Query: 382 SKPLYCSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRR 440
+ +F+GL+ K + DI+ + + K GM++ + R
Sbjct: 420 TTAYVNRWFLGLRFVKDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRS 479
Query: 441 NLPNFV 446
LP ++
Sbjct: 480 QLPKYL 485
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 291/524 (55%), Gaps = 75/524 (14%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P DL RT L L N++ESQEE R E+L +L+
Sbjct: 34 GGQPAKQLGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLV 93
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 94 KQWVKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQ 152
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 153 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 212
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 213 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 272
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 273 LVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 332
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++M+ EF RG I + + A W+ LFE +FF
Sbjct: 333 LMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRA--SWERLFEAPSFFY 390
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QC--------- 371
Y++++ + ++++ ADD W G VES++R L +ER+ + L +C
Sbjct: 391 RYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESA 450
Query: 372 --------------HPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 417
P P S S P +F+GL+ ++ E D+ +++ F
Sbjct: 451 NNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFT 506
Query: 418 QAVSMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 457
+ V M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 507 EHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 550
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/524 (39%), Positives = 291/524 (55%), Gaps = 75/524 (14%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P DL RT L L N++ESQEE R E+L +L+
Sbjct: 33 GGQPAKQLGMTSAISLAEPKPADLQRTENLRASLEPFNVFESQEELNHRMEILAKLNTLV 92
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 93 KQWVKEMSVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERA-DYFQ 151
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 152 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 211
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 212 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 271
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 272 LVARTCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 331
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++M+ EF RG I + + A W+ LFE +FF
Sbjct: 332 LMPIITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRA--SWERLFEAPSFFY 389
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QC--------- 371
Y++++ + ++++ ADD W G VES++R L +ER+ + L +C
Sbjct: 390 RYRHFIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESA 449
Query: 372 --------------HPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 417
P P S S P +F+GL+ ++ E D+ +++ F
Sbjct: 450 NNSQNNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFT 505
Query: 418 QAVSMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 457
+ V M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 506 EHVIMHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 549
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 302/539 (56%), Gaps = 70/539 (12%)
Query: 20 PTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------------------- 59
PT D ++ L+ LR+ ++YE +E V REEVLG ++
Sbjct: 31 PTAFDEKLSKALDDKLREEDVYEDADECVRREEVLGEINALLQDWVLAASERKGITEDMR 90
Query: 60 --------------VHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLTEMPEV 97
VHGP ADIDTLC+GPRH +REEDFFG + ++ + P
Sbjct: 91 PSCNLYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGWDENDYEGSFYDVMRKHPGT 150
Query: 98 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLN 156
+ PV DA VP +K F G ID+ Y L + +PEDLD+ Q S++ N D+ V+SLN
Sbjct: 151 ESIVPVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLDVCQTSVMMNLDDPGVKSLN 210
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
GCRV DQ+LR+VP FR LR +R WA+RRGVYSNV GF GG+N A+LVAR+CQLYPN
Sbjct: 211 GCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGVNLAILVARVCQLYPN 270
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 275
A PSMLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM I+TPAYP
Sbjct: 271 AAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYP 330
Query: 276 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 335
NS++NVS STL ++ EF+RG E+ + + N A W+ L+ F E YK+YL + I
Sbjct: 331 AQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTA--KWEQLWCSLNFLEKYKHYLMVTI 388
Query: 336 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFMGL 393
SA+N DD + W+GWV SR++ L IE T + HP + D K + + + F+GL
Sbjct: 389 SAKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENSHVTLFLGL 448
Query: 394 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQISVAHVTRRNLPNFV 446
E ++ V++F+ V+ + R PGMQ +V ++ R++LP+FV
Sbjct: 449 FPSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYLKRKDLPSFV 508
Query: 447 ---FPGGVR----PSRPSKGTWDSRRALERKVSSHTK-PGADD---GRKRK--QTDDNV 492
G V+ P + K S E+K+S P DD RKRK Q DD++
Sbjct: 509 KEEIDGYVKDIYAPEKEKKAA--SAEDEEKKISEEKPLPLGDDTKAARKRKEMQEDDSI 565
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/611 (38%), Positives = 324/611 (53%), Gaps = 101/611 (16%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M ++NG LG+T PIS + T L LR +E++EEA +RE VLGR+
Sbjct: 1 MATNNGY-LGVTPPISTNESNAREKEVTVTLMDELRRQGTFETEEEAKTREIVLGRVAAL 59
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDTLCV P+H +RE DFF
Sbjct: 60 VKRFVRHVSLKRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFF 118
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
+ML E VTE VPDA+VP++K K SG+ +DLL ARL+L IP+DL + D++L
Sbjct: 119 EVFEEMLKETEGVTEASGVPDAYVPILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLL 178
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQLYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 239 MLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRA 298
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NVS ST IM +EF++G EI + + +A +W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVSASTQMIMTEEFKKGSEIVDKVIVGKA--NWSELFAKHDFF 356
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------ 378
Y+ YL++ S + + W G VESR+RQL +K+E + ++ HP F
Sbjct: 357 HKYRYYLQVIASTGSQELQTKWAGTVESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVSCC 415
Query: 379 ----------------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQF 407
D + +Y + F + ++ KQ VG +
Sbjct: 416 LSDEEVRAVAQGEISEVIAKRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGP-RKL 474
Query: 408 DIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 466
DI EF + V M+ M I V H+ LP++VF G R R ++ + +
Sbjct: 475 DISYPTTEFTKLVKMWEKYDDSTMGIVVRHIKSTALPDYVFEPGERQPRSAQKRPKTSKN 534
Query: 467 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG----------- 515
++ S++T P D K+++ ++V L AT P F+
Sbjct: 535 ADK--SNNTSP--DMPNKKRRASNSVSESL------ATTPLPPQPFKTAQNGVTSTAAIP 584
Query: 516 SPIMSTISSSS 526
SPI T +SSS
Sbjct: 585 SPIALTAASSS 595
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/523 (40%), Positives = 297/523 (56%), Gaps = 52/523 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFVFPGGVRPSRPSKGTWD-SRRALERKVSSHTKPGADDGR 483
L +++ P + + + D SR L+ K SS D R
Sbjct: 492 LHHYL-PAEILQKKKKQSLSDVSRSGLQSKRSSLDSNCLDSSR 533
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/508 (42%), Positives = 291/508 (57%), Gaps = 57/508 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT ISLAGP D D + T+KL + +R ++E E R VLG+L+
Sbjct: 15 KHYGITSSISLAGPKDIDHIYTQKLTEAMRPFGVFEDDAELSHRMVVLGKLNNLVKEWIA 74
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID+LCV PRH R DFF +
Sbjct: 75 ELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEK 133
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + + L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D +
Sbjct: 134 LKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIR 193
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 253
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPII 313
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y
Sbjct: 314 TPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHY 371
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 385
+ + SA + W G VES++R L +ER+ + L H +P F K
Sbjct: 372 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEY 430
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVT 438
+F+G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV
Sbjct: 431 VSMWFLGIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVK 486
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRA 466
R+ L +++ P V R + D R+
Sbjct: 487 RKQLHHYL-PAEVVQKRKKQSVPDINRS 513
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/506 (40%), Positives = 291/506 (57%), Gaps = 51/506 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFVFPGGVRPSRPSKGTWDSRRAL 467
L +++ P + + + D R+L
Sbjct: 492 LHHYL-PAEILQKKKKQSLSDVSRSL 516
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 284/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPTNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 284/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L V L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGVRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/435 (46%), Positives = 265/435 (60%), Gaps = 63/435 (14%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
+G+S + G+TEP+S A PT +L TR LE+ L NLY S+EE R VLG L+ V
Sbjct: 2 LGTSVARFKGVTEPVSTATPTAAELRLTRTLEECLHANNLYPSREEQRQRLNVLGALNAV 61
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPGAD+DTLCV PR R FF
Sbjct: 62 VVEWVRRVALAQRLSEDVVEEHGARIFTFGSYRLGVNGPGADVDTLCVVPRFVERNRYFF 121
Query: 85 G-------------ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 131
G L ML + EL V A+VPV+K +F GV +DLL A ++L
Sbjct: 122 GLPDEQGSRAPTQVVLADMLRQDDRTEELVTVESAYVPVIKIRFMGVDMDLLCAPIALMK 181
Query: 132 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 191
IP++ +I D++L+N D+ T RSLNG RVTD IL LVP + FRTTLRC++FWAKRRG+Y
Sbjct: 182 IPKNFNILDDAVLRNVDDATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIY 241
Query: 192 SNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEG 247
SNV G+LGG+ WA+LVAR+CQLYPNA ++++S FFR+Y+QW+WP PV LC I G
Sbjct: 242 SNVLGYLGGVAWAMLVARVCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAG 301
Query: 248 SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAME 306
L+VWDP +P+D+ HLMPIITPAYP MNS+YNV+ STLRIMM+EF RG +IC + +
Sbjct: 302 LRQLKVWDP-TDPRDRRHLMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLA 360
Query: 307 KNEAD------VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 360
+D DW+ L EP FF YK+YL+I+I+A N DDL+ W+G VESRLR L +
Sbjct: 361 AAGSDGTGVSPRDWERLLEPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQR 420
Query: 361 IERHTYNMLQCHPHP 375
+E + HP P
Sbjct: 421 LE--VLPPVSVHPWP 433
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 14 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 74 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIR 192
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 442 LPNFV 446
L +++
Sbjct: 489 LHHYL 493
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELTHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 284/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/491 (41%), Positives = 286/491 (58%), Gaps = 51/491 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFVFPGGVR 452
L +++ P +R
Sbjct: 492 LHHYL-PAEIR 501
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 14 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 74 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 442 LPNFV 446
L +++
Sbjct: 489 LHHYL 493
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 282/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA + W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEEHQLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/568 (39%), Positives = 310/568 (54%), Gaps = 58/568 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT ISLAGP D D + T+KL + + ++E E R VLG+L+
Sbjct: 16 KHYGITSSISLAGPKDIDHIYTQKLTEAMGPFGVFEDDAELSHRMVVLGKLNNLVKEWIA 75
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID+LCV PRH R DFF +
Sbjct: 76 ELGEQKSLPPTIISAAGGKIFTFGSYRLGVHTKGADIDSLCVAPRHVERS-DFFQTFSEK 134
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + + L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D +
Sbjct: 135 LKQQDGIKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIR 194
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPII
Sbjct: 255 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPII 314
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y
Sbjct: 315 TPAYPQQNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHY 372
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 385
+ + SA + W G VES++R L +ER+ + L H +P F K
Sbjct: 373 IVLTASASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEY 431
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVT 438
+F+G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV
Sbjct: 432 VSMWFLGIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVK 487
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 498
R+ L +++ P V R + D R+ +S T + + TD
Sbjct: 488 RKQLHHYL-PAEVVQKRKKQSVPDINRSACALLSKRTSLDGNFLDSSRDTDTGTPCD-SP 545
Query: 499 AKCHATMPSSSGEFREGSPIMSTISSSS 526
CH + S S F + ++ +SS+
Sbjct: 546 TSCHKSSRSDSPSFPDAHRSLTEGTSST 573
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 286/505 (56%), Gaps = 77/505 (15%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 27 KQLGMTSAISLAEPRPEDLQRTEELRGSLEPYNVFESQDELNHRMEILAKLNTLVKQWVK 86
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PR+ R D+F ++
Sbjct: 87 EISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFEV 145
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D +
Sbjct: 146 LKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDHR 205
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 206 SVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVART 265
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPII
Sbjct: 266 CQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPII 325
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS++NVS ST ++++ EF RG I + E + WD LFE +FF Y+++
Sbjct: 326 TPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWDRLFEAPSFFYRYRHF 383
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------- 381
+ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 384 IVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANSSQ 442
Query: 382 --------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 421
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 443 NNSGNEDDLKQSQGSQSSVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVM 498
Query: 422 MY----TLRKPGMQISVAHVTRRNL 442
M+ + K GM I HV R+ L
Sbjct: 499 MHGVNIKMLKEGMTIDARHVKRKQL 523
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 EVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 302/565 (53%), Gaps = 96/565 (16%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G++ Q LG+T PI+ + + TR L + L+ +ES++E+ +RE VLGR+
Sbjct: 6 GATTSQHLGVTPPIATSESNPREKEVTRTLLEELKRQGTFESEDESKTREIVLGRIAALV 65
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPG+DIDTLCV P+H +RE DFF
Sbjct: 66 KKFVHTVALREGLSDAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFD 124
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
ML + V E+ VPDA+VP++K K SG+ IDL+ ARL+L IP+DL + D++L+
Sbjct: 125 VFEHMLKDAEGVAEVSGVPDAYVPIIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLR 184
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D++ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+
Sbjct: 185 NLDDRCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAM 244
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVARICQLYPNAV +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H
Sbjct: 245 LVARICQLYPNAVAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAH 304
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITPAYP M +++NV+ ST IM +EF++ EI + + N+A W LF FF
Sbjct: 305 RMPIITPAYPSMCATHNVTQSTQMIMTEEFKKASEIVDKVIINKA--SWSDLFARHDFFH 362
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
Y+ YL++ S + + W G VESR+RQL +K+E + ++ HP F S
Sbjct: 363 KYRYYLQVIASTGSPELQVKWSGTVESRVRQLVMKLE-YVESLALAHPFIKGFEQVS--- 418
Query: 386 YC--------------------------------------SYFMGLQRKQGVPVGEG-EQ 406
YC ++++GL + P G +
Sbjct: 419 YCINDEEVRSVAQGEVSEAVARRKKEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRR 478
Query: 407 FDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR-----PSRPSKGT 460
DI EF + V M+ + M I V H+ LP +VF G R RP K T
Sbjct: 479 LDISYPTTEFTKLVKMWEKFDEQKMGIVVRHIKSSALPEYVFDDGERQPRLAQKRPKKET 538
Query: 461 WDSRRALERKVSSHTKPGADDGRKR 485
D SS+T P + + R
Sbjct: 539 TDR--------SSNTSPDMPNKKPR 555
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 282/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTEKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQSISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 282/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/484 (40%), Positives = 287/484 (59%), Gaps = 48/484 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + ++ ++E +EE R VLG+L+
Sbjct: 16 KHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 75
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 76 ELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 134
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L + DA+VPV+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D +
Sbjct: 135 LKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIR 194
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 255 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 314
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 315 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKS--DWSKLLEPPNFFQKYRHY 372
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 387
+ + SA ++ W G VES++R L +ER+ + + +P PG+ + Y
Sbjct: 373 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYV 432
Query: 388 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 442
S +F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 433 SMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 491
Query: 443 PNFV 446
+++
Sbjct: 492 HHYL 495
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 38 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 97
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 98 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 156
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 157 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 216
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 217 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 276
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 277 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 336
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 337 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 394
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 395 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 453
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 454 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 512
Query: 442 LPNFV 446
L +++
Sbjct: 513 LHHYL 517
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/513 (39%), Positives = 288/513 (56%), Gaps = 80/513 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L K L N++ESQ+E R E+L +L+
Sbjct: 32 GGQPAKQLGMTSAISLAEPRAEDLQRTEELSKSLEPYNVFESQDELNHRMEILAKLNTLV 91
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 92 KQWVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 150
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 151 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLK 210
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 211 NLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 270
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L VWDPR N D+YH
Sbjct: 271 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYH 330
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E V WD LFE +FF
Sbjct: 331 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVSWDRLFEAPSFFY 388
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + +L H +P F K
Sbjct: 389 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIVL-AHVNPKCFELKKGAA 447
Query: 382 ----------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 413
+ P +F+GL+ ++ E D+ ++
Sbjct: 448 SANNSQNNSGNEEDLKQQQQQPAQTAVTTAPFCSLWFIGLEFER----SENLNIDLTESI 503
Query: 414 KEFKQAVSMYTLR----KPGMQISVAHVTRRNL 442
+ F + V M+ L K GM I H+ R+ L
Sbjct: 504 QNFTEHVIMHGLNIKMLKEGMAIDARHLKRKQL 536
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 14 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 74 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 442 LPNFV 446
L +++
Sbjct: 489 LHHYL 493
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 14 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 73
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 74 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 132
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 133 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 192
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 193 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 252
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 253 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 312
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 313 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 370
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 371 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 429
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 430 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 488
Query: 442 LPNFV 446
L +++
Sbjct: 489 LHHYL 493
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/510 (39%), Positives = 288/510 (56%), Gaps = 77/510 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 23 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPFNVFESQDELNHRMEILAKLNTLV 82
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 83 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 141
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 142 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 201
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 202 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 261
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 262 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 321
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 322 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRISWERLFEAPSFFY 379
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F +
Sbjct: 380 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFRKGQS 438
Query: 382 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
S P +F+GL+ ++ E D+ +++ F
Sbjct: 439 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 494
Query: 417 KQAVSMY----TLRKPGMQISVAHVTRRNL 442
+ V+M+ + K GM I HV R+ L
Sbjct: 495 TEHVTMHGVNIKMLKEGMTIDARHVKRKQL 524
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 284/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 74 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 133
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 134 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 192
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 193 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 252
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 253 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 312
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 313 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 372
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 373 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 430
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K+
Sbjct: 431 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNY 489
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 490 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQ 548
Query: 442 LPNFV 446
L +++
Sbjct: 549 LHHYL 553
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/480 (40%), Positives = 274/480 (57%), Gaps = 57/480 (11%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------------------ 59
D+ + +LE L N++ES EE REEVLG +++
Sbjct: 2 DVKLSAELEARLHLENVFESPEECARREEVLGEINEALQEWVKAASAAKGIEEDLEPRCN 61
Query: 60 ----------VHGPGADIDTLCVGPRHATREEDFFGE--------LHQMLTEMPEVTELH 101
VHGP ADIDTLC+GPRH +R EDFFG + + P +
Sbjct: 62 LYTFGSYRLGVHGPAADIDTLCIGPRHLSRSEDFFGSEWTEYEGSFYLAMKNHPGTDRIV 121
Query: 102 PVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 160
VPDA VP +K F G +D+ Y L S +PEDLD+ Q SILQN D+ +V+SLNGCRV
Sbjct: 122 AVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVKSLNGCRV 181
Query: 161 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
DQ+LRLVP +FR LR +R WA+ RGVYSNV GF GG+N A+LVAR+CQLYPNA S
Sbjct: 182 ADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQLYPNAAAS 241
Query: 221 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 280
MLV FF+++ W+W PV+L AI + GL+VWD R N +++ LM IITPAYP NS+
Sbjct: 242 MLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 281 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 340
+NV+ STL ++ EF+RG E C + + W++L+EP FF +K+YL++ + A
Sbjct: 302 FNVTHSTLHVLKREFKRGRETCAKILMGQ--TKWESLWEPLPFFTMHKHYLQVTMCAITE 359
Query: 341 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK--PLYCSYFMGLQRKQG 398
DD + W+GWV SRLR L +E + L HP+P D +K L+C Y++GL
Sbjct: 360 DDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGPAPP 419
Query: 399 VPVGEGEQ---FDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRNLPNFVFP 448
G ++ V++F+ V+ + R +PGM++ V H+ R+++P + P
Sbjct: 420 PTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVPAWAIP 479
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/531 (39%), Positives = 297/531 (55%), Gaps = 87/531 (16%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------ 59
++LG+T ISLA P +DL RT +L K L N++ESQ+E R E+L +L+
Sbjct: 23 AKQLGMTSAISLAEPRAEDLQRTGELGKSLEPYNVFESQDELNHRMEILAKLNTLVKQWI 82
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
VH GADID LCV PR+ R D+F +
Sbjct: 83 KEISVSKNMPEAAADRLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQSFFE 141
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 142 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDP 201
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 202 RSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 261
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 262 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 321
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP NS++NVS ST ++++ EF RG I + E V+WD LFE +FF Y++
Sbjct: 322 ITPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVNWDRLFEAPSFFYRYRH 379
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS------- 382
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 380 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFELKKGAVTANN 438
Query: 383 ------------------------KPL-------YCS-YFMGLQRKQGVPVGEGEQFDIR 410
KP +CS +F+GL+ ++ E D+
Sbjct: 439 SQNNSGNEDDLKQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFER----SENLNIDLT 494
Query: 411 LTVKEFKQAVSMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 457
+++ F + V M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 495 ESIQNFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRERKS 545
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 287/510 (56%), Gaps = 77/510 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 382 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 417 KQAVSMY----TLRKPGMQISVAHVTRRNL 442
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 288/490 (58%), Gaps = 49/490 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P D D + T+KL + + ++E +EE R VL +L+
Sbjct: 19 GITSPISLAPPKDIDYIHTQKLVEAMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELG 78
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 79 ESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 137
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
E+ L V DA+VPV+KF+F G+ IDL++ARL + + ++LD+ DS L++ D + +R
Sbjct: 138 QEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIRCIR 197
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 198 SLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 257
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
+PNA+ S LV +FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPA
Sbjct: 258 HPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPA 317
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVSTST ++++E + G + + + + DW LFE FF+ YK+Y+ +
Sbjct: 318 YPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRS--DWPKLFEQPNFFQKYKHYIVL 375
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 389
S + W G VES++R L +ER+ + N+ +P PG+ + Y S +
Sbjct: 376 TASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMW 435
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 445
F+G+ ++ + E + D+ ++ F AV + + K GM+I A+V R++L ++
Sbjct: 436 FLGIIFRK-LESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HY 493
Query: 446 VFPGGVRPSR 455
P G R
Sbjct: 494 FLPAGTLQKR 503
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 287/510 (56%), Gaps = 77/510 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 382 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 417 KQAVSMY----TLRKPGMQISVAHVTRRNL 442
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 287/510 (56%), Gaps = 77/510 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 382 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 417 KQAVSMY----TLRKPGMQISVAHVTRRNL 442
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 282/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHYKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 290/490 (59%), Gaps = 49/490 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PISLA P D D + T+KL + + ++E +EE R VL +L+
Sbjct: 157 GVTSPISLAPPKDIDYIHTQKLVEVMESFGVFEDEEELNHRLVVLCKLNNLVKEWIFELG 216
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 217 ESKNLPPSVVENVGGRIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKH 275
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
E+ L V DA+VPV+KF+F G+ IDLL+ARL + + ++LD+ DS L++ D + +R
Sbjct: 276 QEEIKNLRAVEDAYVPVVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRSLDIRCIR 335
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQL
Sbjct: 336 SLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQL 395
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
+PNA+ S LV++FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPIITPA
Sbjct: 396 HPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPA 455
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVSTST ++++E + G + + + ++ DW LFE FF+ YK+Y+ +
Sbjct: 456 YPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKS--DWPKLFEQPNFFQKYKHYIVL 513
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-Y 389
S + W G VES++R L +ER+ + N+ +P PG+ + Y S +
Sbjct: 514 TASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYVSMW 573
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNF 445
F+G+ ++ + E + D+ ++ F AV + + K GM+I A+V R++L ++
Sbjct: 574 FLGIIFRK-LENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL-HY 631
Query: 446 VFPGGVRPSR 455
P G R
Sbjct: 632 FLPAGTLQKR 641
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/484 (40%), Positives = 287/484 (59%), Gaps = 48/484 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + ++ ++E +EE R VLG+L+
Sbjct: 31 KHYGITSPISLASPKEIDHIYTQKLIEAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 90
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 91 ELSESKNLPPSVVANVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 149
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L + DA+VPV+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D +
Sbjct: 150 LKHQDGIRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIR 209
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 269
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 329
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 330 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 387
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 387
+ + SA ++ W G VES++R L +ER+ + + +P PG+ + Y
Sbjct: 388 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYV 447
Query: 388 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 442
S +F+G+ ++ V E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 448 SMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 506
Query: 443 PNFV 446
+++
Sbjct: 507 HHYL 510
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 286/510 (56%), Gaps = 77/510 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT L L N++ESQ+E R E+L +L+
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDDLRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 382 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGSQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 417 KQAVSMY----TLRKPGMQISVAHVTRRNL 442
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 287/510 (56%), Gaps = 77/510 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 382 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 417 KQAVSMY----TLRKPGMQISVAHVTRRNL 442
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/485 (41%), Positives = 283/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVT++IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/485 (41%), Positives = 282/485 (58%), Gaps = 50/485 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + ++ +W L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKS--NWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 491
Query: 442 LPNFV 446
L +++
Sbjct: 492 LHHYL 496
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 287/510 (56%), Gaps = 77/510 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 259
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH
Sbjct: 260 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYH 319
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF
Sbjct: 320 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFY 377
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 378 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQS 436
Query: 382 -------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
S P +F+GL+ ++ E D+ +++ F
Sbjct: 437 ANNSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNF 492
Query: 417 KQAVSMY----TLRKPGMQISVAHVTRRNL 442
+ V M+ + K GM I HV R+ L
Sbjct: 493 TEHVMMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/594 (37%), Positives = 315/594 (53%), Gaps = 96/594 (16%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS A + + T L + LR N +ES+EEA +RE VLGR+
Sbjct: 12 LGVTPPISTAESNEREKEVTVTLMEELRRQNTFESEEEARTREIVLGRVAALVKKFVYKI 71
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTLCV P+H TRE DFF ML
Sbjct: 72 SIARGLSESAAQAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRE-DFFDTFEPMLK 130
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
EM VTE+ VP+A+VP++K + G+ +D L ARL+L IP+DL + D++L+N DE+ V
Sbjct: 131 EMEGVTEVSGVPEAYVPIIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRNLDERCV 190
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSL G R ++ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WALLVARICQ
Sbjct: 191 RSLGGSRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQ 250
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 251 LYPNALAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITP 310
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M S++NV+ ST IM +EF+RG +I + + A W LF FF Y+ YL+
Sbjct: 311 AYPSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTA--QWSELFAKHDFFHKYRYYLQ 368
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------- 378
I S + D W G VESR+RQL +K+E + +++ HP F
Sbjct: 369 IIASTGDPDLQNKWSGTVESRIRQLVMKLE-YVESLILAHPFIKGFDQVSYCLNEDEVKA 427
Query: 379 --------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLTVKE 415
+ S+ +Y + F + +Q K VG + DI ++
Sbjct: 428 VVQGEISEAIASRKKEDIEGKEGSQTVYTTTFYIGLAIQPKPAGAVGP-RRLDISYPTQD 486
Query: 416 FKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSH 474
F + V M+ + M I V H+ LP+ VF G RP++ ++ +R
Sbjct: 487 FSKLVKMWDKYDESKMGIIVRHIKSSALPDNVFDPGERPAKVTQ---------KRVKGKS 537
Query: 475 TKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSIN 528
+ ++ KR+++ +V +R P+ +G +P++ T+ S N
Sbjct: 538 SNISSEQPNKRQRSSTSVADTIR--------PTENGTSTGTTPVVETLVRPSFN 583
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 259/413 (62%), Gaps = 40/413 (9%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
S+ + G+T PIS+ GPT+ DL T LE LR N++ES EEA RE VLGR+D
Sbjct: 2 STGVKMWGVTPPISMNGPTEKDLEVTNALEAELRANNVFESPEEAKLREVVLGRVDALVK 61
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VHGPG+DIDTLCV P+H RE DFF
Sbjct: 62 EFVYRASIKHGLSESAARASGGKIFTFGSYRLGVHGPGSDIDTLCVAPKHVQRE-DFFEI 120
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
+L +VTE+ VP+A+VP++K KF G+SID L++R++L I + L++ D++L+N
Sbjct: 121 FEALLQARDDVTEVTSVPEAYVPLIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKN 180
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE+ VRSL G RVTD+IL LVP + FR LRC++ WA RR +YSNV GFLGG+ WA+L
Sbjct: 181 LDERDVRSLGGSRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAML 240
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYPN V +VSRFF + QW+WP PVLL IE+G L ++VW+PR P D+ H
Sbjct: 241 VARICQLYPNEVAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHR 300
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYP M +++NV+ ST +M +EF+RG E+ + + + + W+ LFE FF
Sbjct: 301 MPIITPAYPSMCATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKT--SWNELFEKNDFFHK 358
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
YK YL++ S+ +AD W+G VESRLRQL +K+E +L HP F+
Sbjct: 359 YKYYLQVIASSGSADLQLKWQGTVESRLRQLIMKLEL-VPALLCAHPFVKGFN 410
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/550 (40%), Positives = 301/550 (54%), Gaps = 83/550 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD--- 58
GS+ + G+T ISL T + T L + L+ N++ES EEA +RE VLGRLD
Sbjct: 9 GSTPSRTYGVTGAISLQPATKPEQQLTVSLMEELKRRNIFESPEEARAREIVLGRLDVLV 68
Query: 59 ---------------------------------QVHGPGADIDTLCVGPRHATREEDFFG 85
VHGPGADIDTLCV PRH TRE FF
Sbjct: 69 KQFVINVSISLGMSEAVARDSGGKIFTFGSYRLGVHGPGADIDTLCVVPRHITREH-FFE 127
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
L ML + PEVTEL VP+A VP++K KFS + +DLL+ARL+L IP+ L++ D++L+
Sbjct: 128 VLPAMLNDRPEVTELATVPEAFVPIIKLKFSSIEVDLLFARLALPSIPDSLELIDDALLK 187
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D++ VRSL G RVTD+ILRLVP + FR +LR ++ WAK R VYSNV GF GG+ WA+
Sbjct: 188 NLDDRCVRSLGGSRVTDEILRLVPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAM 247
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDK 263
VAR+CQLYPN +V+RFF V +QW WP+PVLL I G G Q +W+P+ P+D+
Sbjct: 248 CVARVCQLYPNKPAGTIVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDR 307
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
H MPIITPAYPCM S++N++ ST +IMM EF+RG + + E W LF+ F
Sbjct: 308 GHRMPIITPAYPCMCSTHNITKSTAQIMMTEFKRGLAVTD--EIATGTKPWAALFDKHDF 365
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI----------------ERHTYN 367
F Y+ YL+I S+ NA+ W G VE+RLRQL +K+ ER +Y
Sbjct: 366 FTRYRYYLQITASSPNAEIQLKWAGTVEARLRQLVMKVEEVETVDLAHPFIKGFERESYY 425
Query: 368 M-------LQCHPHPGDFSDK----------SKPLYC-SYFMGLQRKQGVPVGEG--EQF 407
+ +Q P D + S +Y S+F+GL Q P G +
Sbjct: 426 LTSDEVRAIQVGDVPPDVKGRTLADIEGKEGSGAVYTSSFFIGLL-VQPKPAGHTGPRKL 484
Query: 408 DIRLTVKEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 466
DI V EF + V + + M I V ++ LP++VF G RPS + S +A
Sbjct: 485 DISYPVGEFTRMVKQWEGYAEDSMGIIVRYIKGAQLPDYVFDGEQRPS----ASVPSSKA 540
Query: 467 LERKVSSHTK 476
+R + K
Sbjct: 541 FKRTKTGKAK 550
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/501 (42%), Positives = 292/501 (58%), Gaps = 54/501 (10%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GS Q+ GIT PISLA P D D T+KL + L+ ++E +EE R +LG+L+
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNL 68
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFF 365
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 379
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + +
Sbjct: 366 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENT 425
Query: 380 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISV 434
+K + + +GL K+ + E D+ ++ F +QA++ M+I+
Sbjct: 426 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFEN-EMKIAA 482
Query: 435 AHVTRRNLPNFVFPGGVRPSR 455
HV R+ L + + P V P +
Sbjct: 483 MHVKRKQL-HQLLPSHVLPKK 502
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 277/476 (58%), Gaps = 50/476 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 437
+F+G+ ++ V E D+ ++ F V + + K GM+I HV
Sbjct: 433 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/488 (40%), Positives = 283/488 (57%), Gaps = 52/488 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 387
+ + SA ++ W G VES++R L +ER+ + + +P PG+ Y
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV 433
Query: 388 SYFM---------GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 438
S + + + V + + + T ++QA ++ L++ GM+I HV
Sbjct: 434 SMWFPWDNFSESRKXENAESVNIXXXQSYIQSFTDTVYRQANNINMLKE-GMKIEATHVK 492
Query: 439 RRNLPNFV 446
++ L +++
Sbjct: 493 KKQLHHYL 500
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 285/476 (59%), Gaps = 46/476 (9%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD--- 58
G + G+T P+SLA P + DL ++KLEK + ++E++EE R EVL +++
Sbjct: 12 GDGQKKYPGVTSPLSLAPPKEHDLELSKKLEKEMAPYGVFETEEEQAHRMEVLNKVNILV 71
Query: 59 ---------------------------------QVHGPGADIDTLCVGPRHATREEDFFG 85
V+ GADIDTLCV PRH R DFFG
Sbjct: 72 KAWIRDVSLSKSMPESLIEVVGGGVYTFGSYRLGVNTKGADIDTLCVAPRHVLRS-DFFG 130
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
+ L + PEV + V +A VPV+K +F G+ +D+L+ARL+L V+ E+ ++ +S+L+
Sbjct: 131 SFFESLKQHPEVKDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEENQNLRDESLLK 190
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D + +RSLNGCRVTD+IL LVP I++FR TLR ++ WAK++G+YSN GFLGG++WA+
Sbjct: 191 NLDIRCIRSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGVSWAM 250
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKY 264
LVAR CQLYP+A P+ L+ +FF ++++W WP PVLL + +E L VWDPR N D++
Sbjct: 251 LVARTCQLYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRF 310
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +IMMDEF+ + + N+ +W +LF+P FF
Sbjct: 311 HLMPIITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKD--EWGSLFQPSDFF 368
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDK 381
+ YK+Y+ + ++ D W G VES++R L +E++ + + H +P F D
Sbjct: 369 QKYKHYIVLVARSDTEDHQLEWVGLVESKIRILVGNLEKNPF-ICIAHVNPKSFGPNEDD 427
Query: 382 SKPLYCSYFMGLQRKQGVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAH 436
P +F+GL K G +DI+ ++QA+++ L+K GM++ V H
Sbjct: 428 ESPYIAKWFVGLIFKTGTQTNIDLTYDIQNFMDIVYRQALTINLLKK-GMEVEVKH 482
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/489 (42%), Positives = 284/489 (58%), Gaps = 60/489 (12%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
SS + GIT ISL GP +D +T++L + L+ ++E++EE R VLG+LDQ
Sbjct: 8 SSTKKTYGITSAISLVGPRPEDNRQTKELVEALKPHGVFENEEELNHRLVVLGKLDQIVK 67
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VH GADIDTLCV P H R DFF
Sbjct: 68 DWIRLVAEEKNIPPNIADTVGGKIYTFGSYRLGVHTKGADIDTLCVAPLHVERS-DFFKS 126
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
+ ++ +PE + V +A VPV+K F G+ +D+L+ARL+L V+PE+LD++ DS+L+N
Sbjct: 127 FYDIVKALPETKDCRAVEEAFVPVIKLVFDGIEMDILFARLALRVVPENLDLTDDSLLKN 186
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
D + VRSLNGCRVTD+IL +VP +NFR TLR ++ WAK++GVYSN GFLGG++WA+L
Sbjct: 187 LDPKCVRSLNGCRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAML 246
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYH 265
VAR CQLYPNA S LV++FF V+T+W WP PVLL + LG WDPR N D++H
Sbjct: 247 VARTCQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFH 306
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS+YNVS ST ++ E Q G I + + + +A W+ LFE FF
Sbjct: 307 LMPIITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKA--TWEKLFESSNFFG 364
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
YK+Y+ + SA N DD W G VES++R L +ER+ + L H +P S S PL
Sbjct: 365 KYKHYIVLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKL-AHVYPKSIS-PSTPL 422
Query: 386 YCS-----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGM 430
S +F+GL+ + P+G ++ L ++ F V ++ L + GM
Sbjct: 423 DGSEEEKTDEHSTLWFIGLEFQ---PLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGM 479
Query: 431 QISVAHVTR 439
+I HV R
Sbjct: 480 KIEAKHVKR 488
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/481 (43%), Positives = 285/481 (59%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 GITSPISLAAPKESDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L +
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQ 136
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTM 433
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQ 489
Query: 442 L 442
L
Sbjct: 490 L 490
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/471 (43%), Positives = 272/471 (57%), Gaps = 45/471 (9%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS+A P D+ RTR LE LR L+ES +E R EVL ++++
Sbjct: 27 LGMTSPISMAPPKASDVARTRDLEDTLRQFGLFESADELAHRMEVLSKINELVKQWIYDV 86
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADIDTLCV PRH R DFF ++L
Sbjct: 87 SVKKNMPPSVAENVGGKIYTFGSYRLGVHTKGADIDTLCVAPRHVDRT-DFFSSFVELLR 145
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ EV +L V +A VPV+K F+G+ +D+L+ARL+L IPE D+ +IL+N D + V
Sbjct: 146 QQEEVKDLRAVEEAFVPVIKMTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDPKCV 205
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRVTD+IL LVP + FR +LR ++ WAK+ GVYSNV G+LGG++WA+LVAR CQ
Sbjct: 206 RSLNGCRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVARTCQ 265
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N D++HLMPIITP
Sbjct: 266 LYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITP 325
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS++NVS ST IM EF++G I + E +W LFEP FF YK+++
Sbjct: 326 AYPQQNSTFNVSVSTRTIMRQEFKQGLAITD--EIMLGRTEWIKLFEPPNFFGKYKHFIV 383
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS 388
+ + + W G VES++R L +ERH Y + H +P F D K L
Sbjct: 384 LMATTMTKEHHLEWYGLVESKIRILISNLERHPYIEI-AHVNPESFPPCEPDGDK-LQSM 441
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 439
+F+GLQ + V +DIR V K+ + + K M++ + +V R
Sbjct: 442 WFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIKYVRR 492
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/491 (40%), Positives = 285/491 (58%), Gaps = 47/491 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ LG+T ISLA P D+ +T++LE+ L+ N++ES E R EVL +L+
Sbjct: 28 KTLGVTSAISLALPKISDIQKTKELEEALKPFNVFESDAELNFRMEVLSKLNNLVKEWII 87
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
VH GADID LCV PRH R D+F ++
Sbjct: 88 DISVNQKNMPKNVAEQVGGKIYTFGSYRLGVHQKGADIDALCVAPRHIDRS-DYFTSFYE 146
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
+L E EV++L V +A VPV+K F G+ IDLL+ARL+L IP+D+D+ D +L+N D+
Sbjct: 147 LLKEQKEVSQLRSVENAFVPVIKMNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQ 206
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
+ VRSLNGCRVTD+ILRLVP +NFR LR ++ WAK+ VYSN G+LGG++WA+LVAR
Sbjct: 207 KCVRSLNGCRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVAR 266
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
CQLYPNAV + LV +FF V+++W+WP PVLL + +L VWDPR N D+YHLMPI
Sbjct: 267 TCQLYPNAVAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPI 326
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP NS++NVS ST IM DE + G I E + + W+ LFE FF Y++
Sbjct: 327 ITPAYPQQNSTFNVSLSTRSIMQDELKLGLSITEDIMLGKC--GWEKLFETSHFFSKYRH 384
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKP---L 385
Y+ + +S+ + +D W G VES++R L +ER H N+ H +P F +P +
Sbjct: 385 YIVLLLSSNSPEDQLEWCGLVESKIRLLVGNLERNHHINL--AHVNPDSFQQPQEPDSNV 442
Query: 386 YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 444
C+ +F+G+ + + +DI + + K GM++ +V R+ L +
Sbjct: 443 LCTMWFIGVVFAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTS 502
Query: 445 FVFPGGVRPSR 455
++ P ++ +
Sbjct: 503 YLSPSVLKKEK 513
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 295/566 (52%), Gaps = 87/566 (15%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS + + T L + LR +ES+EEA +RE VLGRL
Sbjct: 8 LGVTPPISTTESSAREKEVTGTLMQELRRQKTFESEEEAKTREIVLGRLAALVKAFVRKV 67
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTLCV P+H RE DFF QML
Sbjct: 68 SLSRGLSEAAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVLRE-DFFDVFEQMLR 126
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E VTE VP+A+VP++K K SG+ ID L ARL+L IP+DL + D++L+N D++ +
Sbjct: 127 ETEGVTECSGVPEAYVPIVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDDRCI 186
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSL G RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 187 RSLGGSRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQ 246
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITP
Sbjct: 247 LYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITP 306
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 307 AYPAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTA--TWSELFAKHDFFHKYRYYLQ 364
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC----- 387
I S + W G VESRLRQL +K+E ++ HP F S YC
Sbjct: 365 IIASTGDPALQIKWAGTVESRLRQLVMKLE-FVESLQLAHPFIKGFEQIS---YCLSEEE 420
Query: 388 ---------------------------------SYFMGL--QRKQGVPVGEGEQFDIRLT 412
++++GL + +Q VG + DI
Sbjct: 421 MRAVAQGEVSEAVAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGP-RKLDISWP 479
Query: 413 VKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRP--SKGTWDSRRALER 469
EF + V + + M I V H+ LP++VF G R +P +K S + R
Sbjct: 480 TTEFTKMVKSWDKFDETKMGIIVRHIKSSTLPDYVFDAGERQPKPALTKKRPKSVKGTTR 539
Query: 470 KVSSHTKPGADDGRKRKQTDDNVDTH 495
S P R D+V T
Sbjct: 540 PNGSSDLPANKRPRASYAGSDSVSTE 565
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 243/684 (35%), Positives = 353/684 (51%), Gaps = 90/684 (13%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEE--------------- 46
G + + GIT ISLA P + D T+KL ++ ++E +EE
Sbjct: 11 GQQSQKHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHXXXXXXXXXXXX 70
Query: 47 ---------------------AVSREEVLGRLDQVHGPGADIDTLCVGPRHATREEDFFG 85
GADID LCV PRH R DFF
Sbjct: 71 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGADIDALCVAPRHVERT-DFFQ 129
Query: 86 ELHQMLTEMPEVTELHP---VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS 142
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS
Sbjct: 130 SFFEKLKQHEEIKDLRVCLCVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDS 189
Query: 143 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 202
IL+N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++
Sbjct: 190 ILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVS 249
Query: 203 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 262
WA+LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D
Sbjct: 250 WAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSD 309
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+YHLMPIITPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP
Sbjct: 310 RYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWSKLFEPPH 367
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFS 379
FF+ YK+Y+ + SA ++ W G VES++R L +ER+ Y + +P PG
Sbjct: 368 FFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKE 427
Query: 380 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISV 434
++++ + S +F+G+ K+ V E D+ ++ F V + + K GM+I
Sbjct: 428 NRNENEFVSMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEA 486
Query: 435 AHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT 494
HV ++ L N P + + + D R+ S + + TD T
Sbjct: 487 THVKKKQL-NLYLPPELVQKKKRQSIADLNRSSNGGSSKRISLDSSHLDSSRDTD--TGT 543
Query: 495 HLRNAKCHATMPSSSGE---------FREGSPIMSTISSSSINLQFEHMDANELAGSNRE 545
+ C + P+S E F E SP SS++ + Q + M +AGS++
Sbjct: 544 PFSSPPCKVSKPASDTEDSVSPPKKLFVEDSP----ASSAAPDAQDQGMSV-PVAGSSQP 598
Query: 546 KVENNL--------------TDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 591
++ L +++ R +NS++++ + + P P +G + S
Sbjct: 599 FLKWRLPSMELPDASSPLPASNTCRVVKNSIKLALNRHSITPP---KPPAEG-----ALS 650
Query: 592 KDAEKLAIEKIMSGPYVADQAFPL 615
D + EK MS P + F L
Sbjct: 651 TDDVPASEEKGMSIPVIGSSTFCL 674
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/490 (41%), Positives = 280/490 (57%), Gaps = 66/490 (13%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------------- 59
IS A PTD DL + L++ L ++YE EE REEVLG L+
Sbjct: 20 ISNAPPTDRDLALSAALDEKLHTEDVYEDPEECTRREEVLGELNALLQEWTRTASAAKGI 79
Query: 60 -------------------VHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLT 92
VHGP ADIDTLC+GPRH +REEDFFG + ++
Sbjct: 80 TEDMRPSCNLYTFGSYRLGVHGPAADIDTLCLGPRHLSREEDFFGFEENDYEGSFYDVMR 139
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQT 151
+ P E+ PV DA VP +K F G ID+ Y L S +PEDLD+ S+L N D+
Sbjct: 140 KHPGTEEIVPVRDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNLDDPG 199
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
V+SLNGCRV DQ+LR VP FR LR +R WA+RRG+YSNV GF GG+N A+LVAR+C
Sbjct: 200 VKSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILVARVC 259
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMPII 270
QLYPNA SMLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM I+
Sbjct: 260 QLYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKIL 319
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS++NVS STL ++ EF+RG E+ + + N+ W+ L+ +F YK+Y
Sbjct: 320 TPAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKC--KWEDLWIKTSFLTMYKHY 377
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCS 388
L + ISA+ A+D + W+GWV SR++ L IE T + HP + D K + +
Sbjct: 378 LMVSISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTHVI 437
Query: 389 YFMG-----LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQISVAH 436
F+G L++K+ V + ++ V++F+ V+ + R PGMQ V H
Sbjct: 438 LFLGLFPSSLKKKEKVAM------NLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMVRH 491
Query: 437 VTRRNLPNFV 446
V R++LP FV
Sbjct: 492 VKRKDLPGFV 501
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/562 (39%), Positives = 303/562 (53%), Gaps = 83/562 (14%)
Query: 3 SSNG--QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
S+NG LG+T PIS+ + + + T L + LR +ES+EE+ +RE VLGRL
Sbjct: 2 STNGAPTYLGVTPPISVNESNEREKLVTVSLMEELRRQGTFESEEESKTREIVLGRLASL 61
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG DIDTLCV P+H +RE DFF
Sbjct: 62 IKKFVHKISLQHGLSEAAADAAGGKIFTFGSYRLGVHGPGTDIDTLCVVPKHVSRE-DFF 120
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
L ML E VTE+ VP+A+VP++ K SG+ IDL ARL+L IP+DL + D++L
Sbjct: 121 EALEPMLRETEGVTEVTGVPEAYVPIVTTKISGIPIDLTMARLALSSIPDDLTLQDDNLL 180
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ +RSLNG RVTD+ILRLVP ++ FR LRC++ WA+++ +YSNV GFLGG+ WA
Sbjct: 181 RNLDERCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGVAWA 240
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQLYP+AV +VSRFF + QW WP PVLL IE+G L ++VW+PR P D+
Sbjct: 241 MLVARICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRS 300
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NVS ST IM +EF++G EI E + W LF FF
Sbjct: 301 HRMPIITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVEKVIM--GTTQWSELFVKHDFF 358
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH---------- 374
Y+ YL++ S + D W G VESR+RQL +K+E + ++ HP
Sbjct: 359 HKYRYYLQVIASTGDPDLHIKWAGTVESRIRQLVMKLE-YVDSLTLAHPFVKGFEQVTHC 417
Query: 375 ----------PGDFSDK--------------SKPLYCSYF---MGLQRKQGVPVGEGEQF 407
G+ SD + +Y + F + ++ KQ VG +
Sbjct: 418 LTDDEVRDAAQGEISDAIAKRKKEDIEGKEGASVVYSTTFYIGLAIEPKQAGAVGP-RRL 476
Query: 408 DIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRA 466
DI EF + V M+ + M I V H+ LP+ VF G R +P + A
Sbjct: 477 DISYPTTEFTKQVKMWEKYDESAMGIVVRHIKSTALPDHVFDEGER--QPRSALKRPKTA 534
Query: 467 LERKVSSHTKPGADDGRKRKQT 488
SS+T P ++R T
Sbjct: 535 KGSGKSSNTSPDVPHKKRRLVT 556
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/490 (42%), Positives = 289/490 (58%), Gaps = 52/490 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A P D+ T LE L+ ++++ E R VLG+L++
Sbjct: 11 GVTGPISTAVPKPQDIKLTNLLEACLQKYGVFDTPEGQKHRLLVLGKLNELVKKWIIDIS 70
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHG GADIDTL V PRH R DFF ++L E
Sbjct: 71 KEKGKSEAEAKEVGGTIFTFGSYRLGVHGKGADIDTLLVAPRHIERT-DFFSSFKELLFE 129
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
VT + VPDA VPV+K +F GV +DLL+ARL+L VIP+ L + S+L+N D + VR
Sbjct: 130 AKNVTNVRAVPDAFVPVIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDAKCVR 189
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD IL+LVP + FR LR ++ WAKRRG+YSN G+LGG++WA+LVAR CQL
Sbjct: 190 SLNGCRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQL 249
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLG--LQVWDPRRNPKDKYHLMPIIT 271
YPNA S +V +FF V+ +W WP PVLL EE LG LQVW+P+ NP D +HLMPIIT
Sbjct: 250 YPNAASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIIT 309
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYP NS++NV+ ST +M++EF+RG +IC ++ + + WD LFEP FF YK+Y+
Sbjct: 310 PAYPQQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGK--LSWDILFEPIKFFSLYKHYI 367
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---DKSKPLYCS 388
I +A ++D L W G VES++R L K+E + N+ H +P + S +
Sbjct: 368 VICATAIDSDLLLKWSGLVESKIRILIGKLEDNE-NIKIAHVNPTSYPRIVPDSTDSHLM 426
Query: 389 YFMGLQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTRRNLP 443
+F+GL+ G P G ++I++ + ++ ++ + LR G Q+ V H RR+L
Sbjct: 427 WFIGLEFCVG-PGGVNITLTYEIQMFINSVVKSPALQSSPDLRN-GTQLDVKHARRRDLS 484
Query: 444 NFVFPGGVRP 453
+++ P V P
Sbjct: 485 DYLSPDIVPP 494
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/490 (43%), Positives = 288/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+
Sbjct: 34 GITSPISLAAPKEIDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 93
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L +
Sbjct: 94 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQ 152
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 153 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 212
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 213 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 272
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 273 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 332
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 333 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 390
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 391 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTM 449
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 450 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQ 505
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 506 LHQLLPNHVL 515
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/481 (43%), Positives = 285/481 (59%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P ++D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 52 GITSPISLAAPKENDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 111
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L
Sbjct: 112 EIKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 170
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 171 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 230
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 231 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 290
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 291 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 350
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 351 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 408
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 409 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 467
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 468 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQ 523
Query: 442 L 442
L
Sbjct: 524 L 524
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/493 (42%), Positives = 289/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+
Sbjct: 128 KHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIR 187
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF ++
Sbjct: 188 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEK 246
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 247 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 306
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 307 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 366
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 367 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 426
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 427 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 484
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 485 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-Y 543
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 544 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVK 599
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 600 RKQLHQLLPNHVL 612
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 211/490 (43%), Positives = 288/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+
Sbjct: 20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 79
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L +
Sbjct: 80 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFTSFYEKLKQ 138
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 139 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 198
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 258
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 259 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 318
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 319 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 376
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 377 LASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-YRTM 435
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 436 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVKRKQ 491
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 492 LHQLLPNHVL 501
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 300/559 (53%), Gaps = 78/559 (13%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N + LG+T IS+AGP D+ +T +L++ L ++ES+ E R EVLG L +
Sbjct: 27 NLKTLGMTSAISMAGPKPIDIEKTNELKESLVPFGVFESEAEMHHRMEVLGSLHRLVRQW 86
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VH GADID LCV PRH R D+F +
Sbjct: 87 IRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIDRS-DYFQSFY 145
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L E P+V +L V DA VPV+K F G+ IDLL+ARL+L IP+ D+ D +L+N D
Sbjct: 146 ELLKEQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLD 205
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
++ VRSLNGCRVTD+ILRLVP I FR TLR ++ WAKR G+YSN G+LGG++WA+LVA
Sbjct: 206 QKCVRSLNGCRVTDEILRLVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVA 265
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R CQLYPNA+P+ L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMP
Sbjct: 266 RTCQLYPNALPATLLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMP 325
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYP NS++NVS+ST ++M+EF+ G I + E W+ LFE FF YK
Sbjct: 326 IITPAYPQQNSTFNVSSSTRTVIMEEFRLGLAITD--EIMLGKCGWERLFEAANFFSRYK 383
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 388
+++ + S+ N D W G VES++R L +ER+ + + H +P ++ S PL +
Sbjct: 384 HFIVLLASSANTLDQLPWCGLVESKIRHLITTLERNQHITI-AHVNPECYN--SVPLNTN 440
Query: 389 YFMGLQRKQGVPVGEGEQ--------------------------------FDIRLTVKEF 416
L G PV E D+ + F
Sbjct: 441 NGHPLALPPGTPVQTEEHGAAEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDLTYDISSF 500
Query: 417 KQAVSMYT----LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVS 472
+AV + + GM I HV R+ L ++ P +R + +K ++ +K
Sbjct: 501 TKAVHYQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREKVNKRKNETLAVHTKKAK 560
Query: 473 SHTKPGADDGRKRKQTDDN 491
++ AD+ T+D+
Sbjct: 561 RVSESSADEVSVLSYTEDS 579
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/500 (41%), Positives = 290/500 (58%), Gaps = 52/500 (10%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GS Q+ GIT PISLA P D D T+KL + L+ ++E ++E R +LG+L+
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNL 68
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N D + +RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFF 365
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 379
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + S
Sbjct: 366 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENS 425
Query: 380 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVA 435
+K + + +GL K+ + E D+ ++ F V + + M+I+
Sbjct: 426 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEMKIAAM 483
Query: 436 HVTRRNLPNFVFPGGVRPSR 455
HV R+ L + + P V P +
Sbjct: 484 HVKRKQL-HQLLPSHVLPKK 502
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 228/564 (40%), Positives = 304/564 (53%), Gaps = 90/564 (15%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M S+NG LG+T PIS + + T L + LR ++ES+EEA RE VLGRL
Sbjct: 1 MASTNGY-LGVTPPISTSESNPREKEVTVTLLEELRRQGIFESEEEAKMREIVLGRLAAL 59
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG DIDTLCV PRH TRE DFF
Sbjct: 60 IKKFVKRVSLARGLSESAANSAGGKIYTFGSYRLGVHGPGTDIDTLCVVPRHVTRE-DFF 118
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
L ML EM VTE+ VP+A VP++K + SG+ IDLL+A+LSL IP+DLD+ D++L
Sbjct: 119 NVLEGMLREMEGVTEVSGVPEAFVPIIKTEISGIPIDLLFAQLSLAAIPDDLDLRDDNLL 178
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSLNG RV ++ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 KNLDERCVRSLNGSRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQLYPNAV +VSRFF + +W WP PVLL IE+G L ++VW+PR P+D+
Sbjct: 239 MLVARICQLYPNAVAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRN 298
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NV ST +IM +EF+RG EI + + E V W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGE--VQWSALFAKHDFF 356
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------ 378
Y+ YL++ S+ + D W G VES++RQL +++E + HP F
Sbjct: 357 FRYRFYLQVIASSPDLDTQNKWSGTVESKIRQLVMRLE-FVDTLKLAHPFIKGFDTVYYC 415
Query: 379 ----------------------------SDKSKPLYC-SYFMGLQRKQGVPVGEG-EQFD 408
+ + +Y S+F+GL K G + D
Sbjct: 416 LSEDETRAVARGEIPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLD 475
Query: 409 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR--PSRPSKGTWDSRR 465
I EF + V ++ + M I V H+ LP+FVF G R +RP K
Sbjct: 476 ISYPTNEFIKMVRLWEKYDESQMNIVVRHIKHTALPDFVFDKGEREAAARPKK------- 528
Query: 466 ALERKVSSHTKPGADDGRKRKQTD 489
R ++ P R R ++D
Sbjct: 529 ---RSRTAKESPAPSAKRSRMESD 549
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 227/582 (39%), Positives = 314/582 (53%), Gaps = 85/582 (14%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G S LG+T PIS AGP+ + T L + LRD N +ES+EEA +RE VLGR+
Sbjct: 4 GESTPTYLGVTPPISTAGPSKREEEVTVTLMQELRDQNRFESEEEARTREIVLGRVSALV 63
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VHGPG+DIDTLCV P+H RE DFF
Sbjct: 64 RKFVYKVSIARGMSETAAQAAGGKIFTYGSYRLGVHGPGSDIDTLCVVPKHVNRE-DFFD 122
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
ML E+ V E+ VP+A+VP++K K S + +DL++AR++L + +DLD+S D+IL+
Sbjct: 123 VFEPMLRELEGVAEVSGVPEAYVPIIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILR 182
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N DE+ VRSL G R+TD+ILRLVP FR LRC++ WA+RR +YSNV GFLGG+ WA+
Sbjct: 183 NLDERCVRSLGGSRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAM 242
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVARICQLYPNA ++VSRFF + +W+WPNPVLL IEEG L ++VW+P+ P D+ H
Sbjct: 243 LVARICQLYPNANAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAH 302
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPIITP YP M S++NVS ST I+ E +R EI + + A W LF FF
Sbjct: 303 RMPIITPNYPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSA--TWSELFAKHDFFH 360
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------- 378
Y+ YL++ S ENAD W G VESRLRQL +K+E + +++ HP F
Sbjct: 361 KYRYYLQVIASTENADLQLKWAGTVESRLRQLVMKLE-YVDSLVLAHPFIKGFDQTHYLL 419
Query: 379 ---------------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFD 408
D ++ +Y + F + ++ KQ VG + D
Sbjct: 420 TEEEVRFVAQGFVSDVISKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGP-RKLD 478
Query: 409 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRA 466
I EF + V M+ M I V H+ LP++VF P +P + K T S
Sbjct: 479 ISYPTAEFTKLVKMWENFDDSKMGIVVRHIKSTMLPDYVFDPSERQPKQQLKRTKSS--- 535
Query: 467 LERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 508
+ S++ D K++++ N+ R+ + +P S
Sbjct: 536 --KSTSNNADASPDMPNKKRRSSLNMSETPRSESALSALPPS 575
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 211/493 (42%), Positives = 286/493 (58%), Gaps = 60/493 (12%)
Query: 2 GSSNGQ----RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL 57
GS Q GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L
Sbjct: 12 GSQQAQPPQRHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKL 71
Query: 58 DQ------------------------------------VHGPGADIDTLCVGPRHATREE 81
+ VH GADID LCV PRH R
Sbjct: 72 NNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS- 130
Query: 82 DFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
DFF + L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ D
Sbjct: 131 DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDD 190
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
S+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG+
Sbjct: 191 SLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGV 250
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
+WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP
Sbjct: 251 SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPS 310
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE
Sbjct: 311 DRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAP 368
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPG 376
FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P P
Sbjct: 369 NFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPK 428
Query: 377 DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPG 429
+ DK + + +GL K+ E D+ ++ F +QA++ M+ L
Sbjct: 429 ENPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---D 483
Query: 430 MQISVAHVTRRNL 442
M+I+ HV R+ L
Sbjct: 484 MKIAAMHVKRKQL 496
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/483 (40%), Positives = 281/483 (58%), Gaps = 45/483 (9%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
+ + LG+T IS+A P DL +T +L + L + E+ EE R EVL ++++
Sbjct: 20 NQARNLGMTSAISMAMPKPLDLQKTIELSEALVPHGVSETDEELNHRMEVLRKVNELAKE 79
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VH GADID LCV PRH R D+F
Sbjct: 80 WIKEVSVQKNMPTSAADHVGGKIYTFGSYRLGVHNKGADIDALCVAPRHVDRV-DYFTSF 138
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L + PEVTEL V +A VPV+K F G+ +D+L+ARL+L IP+++D+ D +L+N
Sbjct: 139 VDLLKKQPEVTELRAVEEAFVPVIKMNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNL 198
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D + VRSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSNV G+LGG++WA+LV
Sbjct: 199 DPKCVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLV 258
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR CQLYPNA + LV +FF V+++W WP PVLL + +L VWDPR N D+YHLM
Sbjct: 259 ARTCQLYPNAAAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLM 318
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYP NS++NVS ST +M +EF++G + E + +A WD LFEP FF Y
Sbjct: 319 PIITPAYPQQNSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKA--SWDKLFEPPNFFVKY 376
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP--- 384
K+++ + S+ + +D W G VES++R L L +ER+ + L H +P + D +P
Sbjct: 377 KHFIVLIASSSSVEDQLEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQPEPD 434
Query: 385 -LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 443
+ +F+GL K+ + DI+ + + S K G +I HV R+ L
Sbjct: 435 TISTMWFIGLVFKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLS 494
Query: 444 NFV 446
+++
Sbjct: 495 SYL 497
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 287/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 22 GITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L
Sbjct: 82 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 379 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 437
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 438 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRKQ 493
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 494 LHQLLPNHVL 503
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 437 WVIGLVLKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 492
Query: 442 L 442
L
Sbjct: 493 L 493
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/490 (42%), Positives = 281/490 (57%), Gaps = 54/490 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 45 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 104
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 105 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 163
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 164 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 223
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 224 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 283
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 284 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 343
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 344 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 401
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 402 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 460
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F V + M+I+ HV R+
Sbjct: 461 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 519
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 520 LHQLLPNHVL 529
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/490 (43%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLATPKETDCVLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P D DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRRQ 492
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/519 (39%), Positives = 286/519 (55%), Gaps = 86/519 (16%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 33 GQPAAKQLGMTSAISLAEPRPEDLQRTGELRGSLEPYNVFESQDELNHRMEILAKLNTLV 92
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 93 KQWVKEISVSKNMPEAAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 151
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 152 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLK 211
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+
Sbjct: 212 NLDPRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAM 271
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNA + LV +FF V+++W+WPNPVLL + +L VWDPR N D+YH
Sbjct: 272 LVARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYH 331
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPAYP NS++NVS ST ++++ EF RG I + E V W+ LFE +FF
Sbjct: 332 LMPIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRVPWERLFEAPSFFY 389
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK---- 381
Y++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 390 RYRHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNAHIAL-AHVNPKCFEFKKGQS 448
Query: 382 ----------------------------------SKPLYCSYFMGLQRKQGVPVGEGEQF 407
S P +F+GL+ ++ +
Sbjct: 449 ANSSQNNSGNEDDPKQTQQQQTNNQANAAASTVTSSPFCSMWFIGLEFER----SDNLNI 504
Query: 408 DIRLTVKEFKQAVSMY----TLRKPGMQISVAHVTRRNL 442
D+ +++ F + V M+ + K GM I HV R+ L
Sbjct: 505 DLTESIQNFTEHVIMHGVNIKMLKEGMTIDARHVKRKQL 543
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISL P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLVAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQ 492
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 433
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 489
Query: 442 L 442
L
Sbjct: 490 L 490
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + +KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCILAQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYEKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQ 492
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 492
Query: 442 L 442
L
Sbjct: 493 L 493
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 433
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 489
Query: 442 L 442
L
Sbjct: 490 L 490
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 34 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 93
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 94 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 152
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 153 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 212
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 213 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 272
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 273 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 332
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 333 TPAYPQQNSTYNVSVSTRMVMVEEFKQGPAITDEILLSKA--EWSKLFEAPNFFQKYKHY 390
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 391 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 449
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 450 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 505
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 506 RKQLHQLLPNHVL 518
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 433
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 489
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 490 LHQLLPNHVL 499
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 442 L 442
L
Sbjct: 493 L 493
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/484 (42%), Positives = 284/484 (58%), Gaps = 56/484 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRNL 442
R+ L
Sbjct: 490 RKQL 493
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 37 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 96
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 97 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 155
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 156 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 215
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 216 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 275
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 276 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 335
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 336 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 393
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 394 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 452
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 453 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 508
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 509 LHQLLPNHVL 518
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 207/484 (42%), Positives = 284/484 (58%), Gaps = 56/484 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRNL 442
R+ L
Sbjct: 490 RKQL 493
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 490 RKQLHQLLPNHVL 502
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 492
Query: 442 L 442
L
Sbjct: 493 L 493
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 210/493 (42%), Positives = 287/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 111 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 170
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 171 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 229
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 230 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 289
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 290 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 349
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 350 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 409
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 410 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 467
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 468 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 526
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 527 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 582
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 583 RKQLHQLLPNHVL 595
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 257 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 316
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 317 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 374
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + D+ +
Sbjct: 375 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTM 433
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+
Sbjct: 434 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQ 489
Query: 442 L 442
L
Sbjct: 490 L 490
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 37 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 96
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 97 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 155
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 156 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 215
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 216 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 275
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 276 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 335
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 336 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 393
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 394 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 452
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 453 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 508
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 509 LHQLLPNHVL 518
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 286/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 80 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 139
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 140 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 198
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 199 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 258
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 259 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 318
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 319 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 378
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 379 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 436
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 437 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 495
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 496 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 551
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 552 LHQLLPNHVL 561
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIR 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 442 L 442
L
Sbjct: 493 L 493
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/493 (42%), Positives = 286/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 25 KHYGITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 84
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 85 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 143
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 144 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 203
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 204 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 263
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 264 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 323
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y
Sbjct: 324 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHY 381
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 382 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 440
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 441 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 496
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 497 RKQLHELLPNHVL 509
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/481 (43%), Positives = 283/481 (58%), Gaps = 56/481 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIR 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 492
Query: 442 L 442
L
Sbjct: 493 L 493
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/490 (42%), Positives = 285/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 119 GITSPISLAAPKETDCLLTQKLIETLKPYGVFEEEEELQRRILILGKLNNLVKEWIREIS 178
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 179 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 237
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 238 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 297
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 298 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 357
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 358 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 417
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 418 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVL 475
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 476 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 534
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 535 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 590
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 591 LHELLPNHVL 600
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 266/447 (59%), Gaps = 48/447 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 432
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLT 412
+F+G+ ++ V E +I LT
Sbjct: 433 VSMWFLGIIFRR---VENAESVNIDLT 456
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 329/600 (54%), Gaps = 96/600 (16%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+R G+ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 19 KRYGVFSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV P H R DFF +
Sbjct: 79 EISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + D +
Sbjct: 376 IVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE-- 433
Query: 386 YCSYF---MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVT 438
+C+ + +GL++ + + + +DI+ T ++QAV+ M+ + GM+I+ H+
Sbjct: 434 FCTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLR 490
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 498
R+ L + L V K + +GR+ TD N + +
Sbjct: 491 RKEL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLS 527
Query: 499 AKCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
A C +M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 528 AGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVVTASVANIQATEISLQQVNTNESSG 587
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 206/487 (42%), Positives = 280/487 (57%), Gaps = 54/487 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+
Sbjct: 34 GITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 93
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 94 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 152
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 153 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 212
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 213 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 272
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 273 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 332
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 333 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVL 390
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 391 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTM 449
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN--- 441
+ +GL K+ E D+ ++ F V + + M+I+ HV R+
Sbjct: 450 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHE 508
Query: 442 -LPNFVF 447
LPN V
Sbjct: 509 LLPNHVL 515
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/523 (39%), Positives = 283/523 (54%), Gaps = 83/523 (15%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PI++A T + T L + LR +ES+ EA +RE VLGRL
Sbjct: 17 LGVTPPIAVAESTPREKEVTVTLLEELRRQGTFESEAEAKTREIVLGRLAALVKKFVHQV 76
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTLCV P+H +RE DFF ML
Sbjct: 77 SLSRGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFFDVFEDMLK 135
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E V E+ VPDA+VP++K K SG+ IDL+ ARL+L I +DL + D++L+N DE+ V
Sbjct: 136 ETEGVIEVSGVPDAYVPIIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRNLDERCV 195
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RVTD+ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 196 RSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVARICQ 255
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA+ +VSRFF + QW WP PV+L IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 256 LYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITP 315
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M +++NV+ ST IM +EF++ +I + + +A W LF FF Y+ YL+
Sbjct: 316 AYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKA--SWSDLFAKHDFFHKYRYYLQ 373
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC----- 387
+ S D W G VESR+RQL +K+E + ++ HP F S YC
Sbjct: 374 VIASTGGPDVQIKWSGTVESRIRQLVMKLE-YVESLALAHPFIKGFEQVS---YCLTDEE 429
Query: 388 ---------------------------------SYFMGLQRKQGVPVGEG-EQFDIRLTV 413
++++GL + P G + DI
Sbjct: 430 VRAVAQGEISEAIAKRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSVGPRRLDISYPT 489
Query: 414 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 455
EF + V M+ + M I V H+ LP++VF G R R
Sbjct: 490 TEFTKLVKMWEKFDENKMGIVVRHIRSAILPDYVFDEGERQPR 532
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/490 (42%), Positives = 285/490 (58%), Gaps = 60/490 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+
Sbjct: 34 GITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 93
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 94 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 152
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 153 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 212
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 213 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 272
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 273 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 332
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 333 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVL 390
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 391 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTM 449
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 450 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQ 505
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 506 LHELLPNHVL 515
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/484 (42%), Positives = 284/484 (58%), Gaps = 56/484 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----L 385
+ + SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFQAPKENPDKEEF 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 489
Query: 439 RRNL 442
R+ L
Sbjct: 490 RKQL 493
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 228/588 (38%), Positives = 318/588 (54%), Gaps = 94/588 (15%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M S G LG+T PIS + + T L L+ ++ES+EEA +RE VLGRL
Sbjct: 1 MASGTGY-LGVTPPISTNESSIREKEVTTTLMGELQRQGIFESEEEAKTREIVLGRLAAL 59
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPGADIDTLCV PRH TR+ DFF
Sbjct: 60 IKKFVRQVSLSRGLSEAAANAAGGKIYTFGSYRLGVHGPGADIDTLCVAPRHVTRD-DFF 118
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
L ML EM VTE+ VP+A+VP++ + SG+ IDLL+A+L L +IPEDLD+ D++L
Sbjct: 119 NVLEGMLREMEGVTEVSGVPEAYVPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLL 178
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+++RSLNG RV ++ILRLVP + FRT LRC++ WA++R VYSNV GFLGG+ WA
Sbjct: 179 RNLDEKSIRSLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWA 238
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR+CQLYPNAV +VSRFF + +W WP PVLL IE+G L ++VW+P+ +D+
Sbjct: 239 MLVARVCQLYPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRS 298
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NV ST +IM +EFQRG I + + +A +W LF FF
Sbjct: 299 HRMPIITPAYPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKA--EWSALFVKHDFF 356
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH---------- 374
+ Y+ YL++ ++ + + W G V S++RQL +++E + + HP
Sbjct: 357 QRYRFYLQVVAASRDLEMQNKWSGTVASKIRQLVMRLE-YVDALKLAHPFIKGFDVVYYC 415
Query: 375 ---------------PG-------DFSDKSKPLYC---SYFMGLQRKQGVPVGEG-EQFD 408
P D +DK + S+F+GL K G + D
Sbjct: 416 LSEEEAQVVTRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLD 475
Query: 409 IRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR--PSRPSKGTWDSRR 465
I EF + M+ + M I+V H+ LP+FVF G R SRP+K +
Sbjct: 476 ISYPTTEFVKMTKMWEKYDESAMHIAVRHIKHTVLPDFVFEPGEREAASRPTKRS----- 530
Query: 466 ALERKVSSHTKPGADDGRKRKQTDDNVDTHLR--NAKCHATMPSSSGE 511
R + P KR +TD VD R ++ +P+SS +
Sbjct: 531 ---RSIKDSPAPAT----KRSRTDLGVDMQSRPTSSASSTRLPASSSQ 571
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 301/545 (55%), Gaps = 114/545 (20%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYL---------------------RDVNLYESQEEA 47
LG+T IS A P +DL +T++LEK L N++E++ E
Sbjct: 29 LGMTSAISTAEPKPEDLQKTQELEKSLGKCGLVREEQYPGLMCQDFPLEPYNVFEAESEL 88
Query: 48 VSREEVLGRLDQ------------------------------------VHGPGADIDTLC 71
R E+L +L+ VH GADID LC
Sbjct: 89 NHRMEILAKLNTLVKQWVRDVSISRHMPEATAEKLGGKIYTFGSYRLGVHHKGADIDALC 148
Query: 72 VGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV 131
V PR+ R D+FG ++L + PEVTE V +A VPV+K F G+ IDLL+ARL+L
Sbjct: 149 VAPRNIDRS-DYFGSFFELLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKE 207
Query: 132 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRR--- 188
IP++ D+ D +L+N D+++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAKR+
Sbjct: 208 IPDNFDLRDDMLLKNLDQKSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKLLP 267
Query: 189 -----------------------------GVYSNVAGFLGGINWALLVARICQLYPNAVP 219
G+YSN G+ GG++WA+LVAR CQLYPNAV
Sbjct: 268 HGLISPEGMCDERCFNVRVAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVA 327
Query: 220 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 279
+ LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPIITPAYP NS
Sbjct: 328 ATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNS 387
Query: 280 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN 339
++NVS+ST ++M+ EF RG +I + + + WD LFE +FF Y++++ + +++ N
Sbjct: 388 TFNVSSSTRKVMLMEFNRGMQITDDIMMGKQ--MWDKLFEAPSFFYRYRHFIVLLVTSSN 445
Query: 340 ADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHP--------HP--------GDFSDKS 382
ADD W G VES++R L +ER+ + N+ +P +P G ++++
Sbjct: 446 ADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNPAATLNAGGGADANQT 505
Query: 383 KPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 441
+CS +F+GL+ ++ E D+ +++ F +V + L K GM+I HV R+
Sbjct: 506 PAAFCSLWFIGLEFER----TENLNVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRKQ 561
Query: 442 LPNFV 446
L +++
Sbjct: 562 LASYL 566
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 206/479 (43%), Positives = 282/479 (58%), Gaps = 52/479 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLXFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNL 442
+ +GL K+ E D+ ++ F +QA++ + + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS-KMFEVDMKIAAMHVKRKQL 493
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 206/490 (42%), Positives = 281/490 (57%), Gaps = 54/490 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+
Sbjct: 31 KHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 90
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 91 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 149
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 150 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 209
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 269
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 329
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y
Sbjct: 330 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHY 387
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 388 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 446
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F V + + M+I+ HV R+
Sbjct: 447 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 505
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 506 LHELLPNHVL 515
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 208/490 (42%), Positives = 282/490 (57%), Gaps = 54/490 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFGGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F V + + M+I+ HV R+
Sbjct: 434 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 492
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 493 LHQLLPNHVL 502
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 185/408 (45%), Positives = 252/408 (61%), Gaps = 40/408 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DISESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 316 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 373
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+ + SA ++ W G VES++R L +ER+ + L H +P F
Sbjct: 374 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/493 (42%), Positives = 286/493 (58%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T++L + L+ ++E +EE R +LG+L+
Sbjct: 31 KHYGITSPISLAAPKETDCLLTQRLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 90
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 91 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 149
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 150 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 209
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 269
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 329
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y
Sbjct: 330 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHY 387
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 388 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 446
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 447 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVK 502
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 503 RKQLHELLPNHVL 515
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 215/573 (37%), Positives = 313/573 (54%), Gaps = 82/573 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS + T+ + T L LR N++E+++E+ RE VLGR+ Q
Sbjct: 10 LGVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKV 69
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTLCV P+H TR+ DFF +L
Sbjct: 70 ALLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLR 128
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E+ VTE+ VP+A+VPV+K K SG+ +DLL AR++L IP+DL + D++L+N DE+ +
Sbjct: 129 ELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCI 188
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSL G RVTD +LRLVP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 189 RSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQ 248
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 249 LYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITP 308
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 309 AYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRYYLQ 366
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------- 378
+ S N+D W G VESR+RQL +K+E + ++ HP F
Sbjct: 367 VIASTGNSDLQIKWAGTVESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEEVRA 425
Query: 379 --------------------SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTVKEF 416
+ + P+Y ++++GL + P G + DI EF
Sbjct: 426 IAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEF 485
Query: 417 KQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHT 475
+ V ++ + M + V H+ +LP++VF G RP + ++ +R + +T
Sbjct: 486 TKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKTHNT 540
Query: 476 KPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 508
P + R+R D L+ A+ P++
Sbjct: 541 SPDMPNKRQRSSQSVTTDLSLKQAENGHAAPAN 573
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 229/601 (38%), Positives = 324/601 (53%), Gaps = 85/601 (14%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+RLGI+ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 19 KRLGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 79 EISESKSLPQSVIDNVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYAK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ FLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + +A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLRKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + +D K
Sbjct: 376 IVLLASATTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDMEK-F 434
Query: 386 YCSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRN 441
+ +GL K+ + +DI+ T ++QAV+ + + GM+I+ H+ R+
Sbjct: 435 RTMWVIGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVN-SKMFEVGMKITAMHLRRKE 493
Query: 442 LPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKC 501
L + L V K + +GR+ TD N + +A C
Sbjct: 494 L---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDTSFDLSAGC 530
Query: 502 HATM--PSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGSNREKVEN 549
+M PSS+ + G SP ++ +++S N+Q + ++ S V
Sbjct: 531 ENSMSVPSSTSAVKTGPLISSSQGRNSPALAVMTASVANIQATEISLQQVNTSESSGVAL 590
Query: 550 N 550
N
Sbjct: 591 N 591
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/479 (43%), Positives = 282/479 (58%), Gaps = 52/479 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDXLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVL 377
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 378 LASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTM 436
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNL 442
+ +GL K+ E D+ ++ F +QA++ + + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS-KMFEVDMKIAAMHVKRKQL 493
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/495 (42%), Positives = 288/495 (58%), Gaps = 62/495 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------ 60
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+ +
Sbjct: 18 KHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEEPQRRILILGKLNNLVKEWIR 77
Query: 61 -------------------HGP-------------GADIDTLCVGPRHATREEDFFGELH 88
GP GADID LCV PRH R DFF +
Sbjct: 78 EISESKVSPESVFLDSGFTWGPCKYRIGXWDYYFLGADIDALCVAPRHVDRS-DFFTSFY 136
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D
Sbjct: 137 DKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLD 196
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
+ +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVA
Sbjct: 197 IRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVA 256
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMP
Sbjct: 257 RTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMP 316
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK
Sbjct: 317 IITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYK 374
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSK 383
+Y+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE 434
Query: 384 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAH 436
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H
Sbjct: 435 -FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMH 489
Query: 437 VTRRN----LPNFVF 447
V R+ LPN V
Sbjct: 490 VKRKQLHQLLPNHVL 504
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/398 (45%), Positives = 242/398 (60%), Gaps = 39/398 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
+G + LG+T PI+ GPT ++ T+ L L ++ES EE+ RE +LG+LD
Sbjct: 12 LGGGPTRNLGVTPPIATNGPTSREIEVTKTLVAELEKQGVFESDEESKIREVILGKLDAM 71
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSISHGMSETLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
ML E EVTE+ VP AHVP++ KF GV ID +ARL+L + ++L + D++L
Sbjct: 131 SVFESMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLL 190
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 191 RNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWA 250
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+L ARICQLYPN +VSRFF + QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRL 310
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + +WD LF FF
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TNWDELFAKHDFF 368
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
YK YL++ S+ +AD W G VES++RQL +K+E
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 215/573 (37%), Positives = 313/573 (54%), Gaps = 82/573 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS + T+ + T L LR N++E+++E+ RE VLGR+ Q
Sbjct: 10 LGVTPPISTSVSTEREKEVTITLMDELRRQNMFETEDESQLREIVLGRVAQLVKKFVHKV 69
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTLCV P+H TR+ DFF +L
Sbjct: 70 ALLRGLSESAADSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVTRD-DFFEYFEPLLR 128
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E+ VTE+ VP+A+VPV+K K SG+ +DLL AR++L IP+DL + D++L+N DE+ +
Sbjct: 129 ELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDERCI 188
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSL G RVTD +LRLVP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 189 RSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVARICQ 248
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPIITP
Sbjct: 249 LYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITP 308
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 309 AYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRYYLQ 366
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------------- 378
+ S N+D W G VESR+RQL +K+E + ++ HP F
Sbjct: 367 VIASTGNSDLQIKWAGTVESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEEVRA 425
Query: 379 --------------------SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTVKEF 416
+ + P+Y ++++GL + P G + DI EF
Sbjct: 426 IAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPTIEF 485
Query: 417 KQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHT 475
+ V ++ + M + V H+ +LP++VF G RP + ++ +R + +T
Sbjct: 486 TKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKTHNT 540
Query: 476 KPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 508
P + R+R D L+ A+ P++
Sbjct: 541 SPDMPNKRQRSSQSVTTDLSLKQAENGHAAPAN 573
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 221/597 (37%), Positives = 319/597 (53%), Gaps = 86/597 (14%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------ 59
+R GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 15 AKRYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWI 74
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
VH GADID LC+ PRH R DFF +
Sbjct: 75 REISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYA 133
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D
Sbjct: 134 KLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDI 193
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
+ +RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 194 RCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVAR 253
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPI
Sbjct: 254 TCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPI 313
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+
Sbjct: 314 ITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKH 371
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKP 384
Y+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 372 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE- 430
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRR 440
+ +GL K+ E D+ ++ F V + + GM+I+ H+ R+
Sbjct: 431 FRTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFETGMKIAAMHLRRK 489
Query: 441 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 500
L + L V K + +GR+ +D+ +
Sbjct: 490 EL---------------------HQLLPHHVLQEKKAHSTEGRRLTDLNDSSFDLSAGGE 528
Query: 501 CHATMPSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAGS 542
++PSS+ + G SP ++ +++S N+Q + ++ +E +G+
Sbjct: 529 NSISVPSSTSTMKTGPLTSSSQGRNSPSLAVMTASVANIQATEISLQQVNTSESSGT 585
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 216/561 (38%), Positives = 301/561 (53%), Gaps = 86/561 (15%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M + G LG+T PIS T+ + T L + LR N E++EE+ RE VLGR+
Sbjct: 1 MATEEGH-LGVTPPISTGESTNREKEVTATLMEELRRQNTIETEEESRRREVVLGRVAAL 59
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDTLCV P+H +RE DFF
Sbjct: 60 VKKFVRQVSMARGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSRE-DFF 118
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
ML E +E+ VP+A+VP++K K G+ DLL ARL+L IP+DL + D++L
Sbjct: 119 EVFEPMLKEADGASEVSGVPEAYVPIIKAKLMGIPFDLLMARLALSSIPDDLSLKDDNLL 178
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ +RSL G RV D+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCIRSLGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWA 238
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+
Sbjct: 239 MLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRS 298
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M S++NV+ ST IM +EF++G +I + + A +W LF FF
Sbjct: 299 HRMPIITPAYPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTA--EWSELFAKHDFF 356
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
Y+ YL++ S +AD W G VESR+RQL +K+E + +++ HP F +
Sbjct: 357 HKYRYYLQVIASTGSADLQIKWSGTVESRIRQLVMKLE-YVDSLILAHPFIKGFEQIA-- 413
Query: 385 LYC--------------------------------------SYFMGLQRKQGVPVGEG-E 405
YC ++++GL + P G
Sbjct: 414 -YCTSDEEVRAVAQGETSDAITRRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPR 472
Query: 406 QFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 464
+ DI EF + V M+ +P M I V H+ LP++VF G R +P + +
Sbjct: 473 RLDISYPTTEFTKLVKMWEKYDEPTMGIVVRHIKSAALPDYVFDEGER--QPRQALKRPK 530
Query: 465 RALERKVSSHTKPGADDGRKR 485
A S+HT P + ++R
Sbjct: 531 TAKGSGKSNHTSPDVPNKKRR 551
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 228/594 (38%), Positives = 319/594 (53%), Gaps = 90/594 (15%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 22 GISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKL 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 388
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTM 437
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 444
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-- 494
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
+ L +V K A +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHRVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENS 533
Query: 505 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
M PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 208/542 (38%), Positives = 285/542 (52%), Gaps = 96/542 (17%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
+G + LG+T PI+ GPT ++ T+ L L ++ES EE+ RE +LG+LD
Sbjct: 12 LGGGPTRNLGVTPPIAANGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAM 71
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSIANGMSESLARSAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
ML E EVTE+ VP AHVP++ KF GV ID +ARLSL + + L + D++L
Sbjct: 131 SVFETMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLL 190
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSL G RVTD ILRLVP I FR LRC++ WA++R +YSNV GFLGG+ WA
Sbjct: 191 RNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWA 250
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+L ARICQLYPN +VSRFF ++ QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRL 310
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + DW LF FF
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TDWCELFAKHDFF 368
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCH 372
YK YL++ S+ +AD W G VES++RQL +K+E H + + +CH
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECH 428
Query: 373 -------PHPGDFSDK----------------------------------SKPLY-CSYF 390
GD ++ + +Y +++
Sbjct: 429 NDHEVRLVATGDIPEQVAQRTQKVAALPETEEAKKAAEEEAAKITEGKEGHRMIYTTTFY 488
Query: 391 MGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFP 448
+GL + + GEG + DI EF V + + M I V H+ LP +VF
Sbjct: 489 IGLSIEPKL-AGEGPRKLDISYPTAEFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYVFE 547
Query: 449 GG 450
GG
Sbjct: 548 GG 549
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/520 (39%), Positives = 289/520 (55%), Gaps = 77/520 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS A +D + T+ L + LR +E+ EE+ +RE VLGR+
Sbjct: 8 LGVTLPISTADSSDREKELTKTLMEELRRQGTFENVEESRTRELVLGRVAAAVKKFVRQV 67
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHG G+DIDTLCV P+H RE DFF +L
Sbjct: 68 SLSRGLSESAATAAGGKIFTFGSYRLGVHGAGSDIDTLCVVPKHVLRE-DFFETFEPILR 126
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E+ +E+ VP+A+VP++K K SG+ +D L ARL+L IP+DL + D++L+N DE+ +
Sbjct: 127 EVEGASEVSGVPEAYVPIIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDERCI 186
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSL G RV D+ILRLVP ++ +R +LRC++ WA+RR +YSNV GFLGG+ WA+LVARICQ
Sbjct: 187 RSLGGSRVNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVARICQ 246
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAV +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPIITP
Sbjct: 247 LYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITP 306
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M S++NV+ ST I+ +EF++G +I + + A W LF FF Y+ YL+
Sbjct: 307 AYPAMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSA--TWADLFRKHDFFHKYRYYLQ 364
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--------SDKSKP 384
+ S +N + W G VESRLRQL +K+E + +++ HP F D+ +
Sbjct: 365 VIASTDNTETQIKWAGTVESRLRQLVMKLE-YVDSLILAHPFIKGFDQVCHCSTEDEIRS 423
Query: 385 LYC---------------------------SYFMGLQRKQGVPVGEG-EQFDIRLTVKEF 416
+ C ++++GL+ + G + DI EF
Sbjct: 424 VACGEIPEAVRKRKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPTTEF 483
Query: 417 KQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 455
+ V M+ + M I V H+ +LP++VF G R R
Sbjct: 484 TKLVKMWEKYNETTMGIYVRHMKSTSLPDYVFDEGERQPR 523
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 223/615 (36%), Positives = 311/615 (50%), Gaps = 101/615 (16%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
+G + LG+T PI+ GPT ++ T+ L L ++ES EE+ RE +LG+LD
Sbjct: 12 LGGGPTRNLGVTPPIATNGPTPREIEVTKTLVAELEKQGVFESDEESKVREVILGKLDAM 71
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSIASGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
ML E EVTE+ VP AHVP++ KF GV ID +ARLSL + + L + D++L
Sbjct: 131 SVFEGMLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLL 190
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 191 RNLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWA 250
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+L ARICQLYPN +VSRFF + QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRL 310
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + W LF FF
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--THWSELFAKHDFF 368
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE---------------------- 362
YK YL++ S+ +AD W G VES++RQL +K+E
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECW 428
Query: 363 -RHTYNMLQCHPHPGDFSDKSKPL------------------------------YCS-YF 390
H M+ P + +++ L Y + ++
Sbjct: 429 NDHEVRMVATGEVPDAVAQRTQKLGALPATDSAQQAAADEAAKVAEGKEGHRMIYTTMFY 488
Query: 391 MGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFP 448
+GL + + GEG + DI EF V + + M I V H+ LP +VF
Sbjct: 489 IGLSIEPKL-AGEGPRKLDISYPTAEFTGKVKQWDQYDEASMGIVVRHIKWTQLPAYVFE 547
Query: 449 GGV-RPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 507
GG R + + G + +RA K + T GA+ + + D +T + A M S
Sbjct: 548 GGENRVAAAAAGKVNGKRAKSGKKKNGT--GAEGAGQANGSLDEGETVTAVDQADAEMAS 605
Query: 508 SSGEFRE--GSPIMS 520
+ + R G+P+ +
Sbjct: 606 PTKKQRTVPGAPLAA 620
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 228/594 (38%), Positives = 318/594 (53%), Gaps = 90/594 (15%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 22 GISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKL 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 388
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTM 437
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 444
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-- 494
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
+ L V K A +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHHVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENS 533
Query: 505 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
M PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 213/498 (42%), Positives = 285/498 (57%), Gaps = 56/498 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+R GI+ PISLA P + D T+KL + LR ++E +EE SR +L +L+
Sbjct: 19 KRYGISSPISLAAPKETDCALTQKLIETLRPFGVFEEEEELQSRILILEKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 79 EISESRSLPEAVVESVGGRLFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F GV ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLREEVRDLRAVEEAFVPVIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 434
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRR 440
+ +GL K+ E D+ ++ F +QA++ T M+I H+ R+
Sbjct: 435 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKTFEM-DMKIDAMHLRRK 492
Query: 441 N----LPNFVFPGGVRPS 454
LPN V P+
Sbjct: 493 ELHQLLPNHVLQKKKHPA 510
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 301/561 (53%), Gaps = 87/561 (15%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M NG LG+T PIS+ T + T L + L+ E +EEA +RE VLGR+
Sbjct: 1 MAQHNGH-LGVTAPISVMESTTREKEVTITLLEELKKQKTIEGEEEARTREIVLGRVAAL 59
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDTLCV P+H +REE +F
Sbjct: 60 VKKCVHEISLANGLSESAANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVSREE-WF 118
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
+ L EM VTE+ VP+A VPV+K K G+ ID ARL+L IPEDLD+S D++L
Sbjct: 119 DVFERRLREMDGVTEVSGVPEAFVPVIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLL 178
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSLNG RVTD ILRLVP++ FR LRC++ WA R+ +YSNV GFLGG+ WA
Sbjct: 179 RNLDERCVRSLNGSRVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWA 238
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR+CQLYPNA +VSRFF + QW+WP PVLL IEEG L ++VW+P+ P D+
Sbjct: 239 MLVARVCQLYPNACAGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRA 298
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NV ST I+ +E ++G E+ E + A DW LF FF
Sbjct: 299 HRMPIITPAYPAMCATHNVMASTQMIITEELKKGSELVEKIIVGTA--DWSELFIKHDFF 356
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
+ Y+ YL++ S NAD W G VESR+RQL +K+E + ++ HP F S
Sbjct: 357 DKYRYYLQVIASTGNADLQLKWSGTVESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVS-- 413
Query: 385 LYC--------------------------------------SYFMGLQRKQGVPVGEG-E 405
YC ++++GL + P G
Sbjct: 414 -YCLSDEEVRAVAQGEISETVKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPR 472
Query: 406 QFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 464
+ DI EF + V M+ + M I V H+ LP++VF G R +RP K S+
Sbjct: 473 KLDISYPTTEFTKLVKMWEKFDEAKMGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSK 532
Query: 465 RALERKVSSHTKPGADDGRKR 485
+ + S +T P + ++R
Sbjct: 533 NSGQ---SGNTSPEQPNKKRR 550
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/496 (42%), Positives = 288/496 (58%), Gaps = 66/496 (13%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 15 KHYGITSPISLAAPKETDWVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 74
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 75 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 133
Query: 91 LTEMPEVTELHPVP-DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
L EV +L +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D
Sbjct: 134 LKLQEEVKDLRVCKWEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDI 193
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
+ +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 RCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVAR 253
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPI
Sbjct: 254 TCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPI 313
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+
Sbjct: 314 ITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKH 371
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKP 384
Y+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 372 YIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE- 430
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVS--MYTLRKPGMQISVA 435
+ +GL K+ E E + LT ++ F +QA++ M+ + M+I+
Sbjct: 431 FRTMWVIGLVFKK----TENENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAM 483
Query: 436 HVTRRN----LPNFVF 447
HV R+ LPN V
Sbjct: 484 HVKRKQLHQLLPNHVL 499
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 325/598 (54%), Gaps = 94/598 (15%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 19 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIRE 78
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
VH GADID LCV P H R DFF + L
Sbjct: 79 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 151
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 KLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 375
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 386
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 376 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 434
Query: 387 CSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRR 440
+ +GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+
Sbjct: 435 TMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHLRRK 491
Query: 441 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 500
L + L V K + +GR+ TD N + +A
Sbjct: 492 EL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAG 528
Query: 501 CHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
C +M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 529 CENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 586
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 228/599 (38%), Positives = 328/599 (54%), Gaps = 94/599 (15%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+R G++ PISLA P + D + TR+L + LR ++E +EE R VL +L+
Sbjct: 19 KRYGVSSPISLAVPKETDCLLTRRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV P H R DFF +
Sbjct: 79 EMSESKSLPQSVTENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFASFYAK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSY 389
+ + SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 376 IVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEF 434
Query: 390 F------MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTR 439
+GL++ + + + +DI+ T ++QAV+ M+ + GM+I+ H+ R
Sbjct: 435 RTMWVIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRR 491
Query: 440 RNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNA 499
+ L + L V K + +GR+ TD N + +A
Sbjct: 492 KEL---------------------HQLLPHHVLQDKKAHSPEGRRL--TDLNDSSFDLSA 528
Query: 500 KCHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
C +M PSS+ + G SP ++ +++S ++Q + ++ NE +G
Sbjct: 529 GCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVADIQATEMSLQQVNTNESSG 587
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/424 (43%), Positives = 262/424 (61%), Gaps = 45/424 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M +LG+T PIS T+ ++ T L + L+ L+ES++EA R VLG+LD+
Sbjct: 1 MSQEKPIQLGVTPPISTEPSTEREIKLTNDLLETLKSYGLFESEQEAQKRVVVLGKLDKL 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHG GADIDTLCV P+H RE FF
Sbjct: 61 VKEFVYKVSKMKGFPDSLAREAGGKIFTYGSYRLGVHGAGADIDTLCVFPKHVEREH-FF 119
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
++ ML E PEVTE+ VPDA+VPV+K FSG+ ID + ARL++ +P+DL+++ ++IL
Sbjct: 120 TIMYDMLKERPEVTEISAVPDAYVPVIKMHFSGIPIDFICARLAVARVPDDLELADNNIL 179
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSLNG RVTD ILRLVP + FR LR ++ WAK + +YSNV GFLGG+ WA
Sbjct: 180 KNLDERCVRSLNGSRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGVAWA 239
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+L+ARICQLYPNA + +V+RFF + QW+WP PVLL +E+G L ++VW+P+ P D+
Sbjct: 240 MLIARICQLYPNACAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRS 299
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NV+ ST +IM+ EF+ G ++ + W LF FF
Sbjct: 300 HRMPIITPAYPSMCATHNVTESTRKIMIQEFKNGIDVASNIILGSG--QWSDLFVKSDFF 357
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSK 383
+ +K+YL+I S+ +++ W G VE++LRQL LK+E T +M++ HP+ F K
Sbjct: 358 QQFKHYLQITSSSYSSETQLMWSGLVEAKLRQLVLKLE--TVDMIELAHPYVKGF---DK 412
Query: 384 PLYC 387
YC
Sbjct: 413 AHYC 416
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 325/598 (54%), Gaps = 94/598 (15%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 20 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIRE 79
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
VH GADID LCV P H R DFF + L
Sbjct: 80 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 151
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 139 KLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 258
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 259 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 376
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 386
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 377 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 435
Query: 387 CSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRR 440
+ +GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+
Sbjct: 436 TMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHLRRK 492
Query: 441 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 500
L + L V K + +GR+ TD N + +A
Sbjct: 493 EL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAG 529
Query: 501 CHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
C +M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 530 CENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 325/598 (54%), Gaps = 94/598 (15%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 19 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 78
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
VH GADID LCV P H R DFF + L
Sbjct: 79 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 137
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 151
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 197
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 198 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 257
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 258 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 317
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 318 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 375
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 386
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 376 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 434
Query: 387 CSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRR 440
+ +GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+
Sbjct: 435 TMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRK 491
Query: 441 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 500
L + L V K + +GR+ TD N + +A
Sbjct: 492 EL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAG 528
Query: 501 CHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
C +M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 529 CENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 586
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 325/598 (54%), Gaps = 94/598 (15%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 20 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 79
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
VH GADID LCV P H R DFF + L
Sbjct: 80 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 151
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 139 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTC 258
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 259 QLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYI 376
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 386
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 377 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 435
Query: 387 CSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRR 440
+ +GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+
Sbjct: 436 TMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRK 492
Query: 441 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 500
L + L V K + +GR+ TD N + +A
Sbjct: 493 EL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAG 529
Query: 501 CHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
C +M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 530 CENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 208/542 (38%), Positives = 286/542 (52%), Gaps = 96/542 (17%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
+G + LG+T PI+ GPT ++ TR L L ++ES EE+ RE +LG+LD
Sbjct: 12 LGGGPTRTLGVTPPIATNGPTPREIEVTRTLVAELERQRVFESDEESKVREVILGKLDAM 71
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDTLCV P+H RE DFF
Sbjct: 72 VKDFVYRVSIAHGMSESLARAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVQRE-DFF 130
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
ML E EVTE+ VP AHVP++ KF GV ID +ARL+L + ++L + D++L
Sbjct: 131 SVFEGMLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLALPRVEDNLSLEDDNLL 190
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
++ DE+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA
Sbjct: 191 RSLDERDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWA 250
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+L ARICQLYPN +VSRFF ++ QW+WP PVLL IE+G L ++VW+P+ P D+
Sbjct: 251 MLTARICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRL 310
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NVS ST +M EF+R E+ + + + DW LF F+
Sbjct: 311 HRMPIITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TDWSELFAKHDFY 368
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCH 372
YK YL++ S+ +AD W G VES++RQL +K+E H + + +CH
Sbjct: 369 FKYKYYLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECH 428
Query: 373 -------PHPGDFSDK----------------------------------SKPLY-CSYF 390
GD D+ + +Y +++
Sbjct: 429 NDNEVRLVATGDIPDEVAQRTQKVDALPETEEAKQAAEAEAAKATEGKEGHRMIYTTTFY 488
Query: 391 MGLQRKQGVPVGEGE-QFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFP 448
+GL + + GEG + DI EF V + + M I V H+ LP +VF
Sbjct: 489 IGLSIEPKL-AGEGHRKLDISYPTAEFTSKVKQWEQYDEASMGIVVRHIKWTQLPAYVFE 547
Query: 449 GG 450
GG
Sbjct: 548 GG 549
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 226/594 (38%), Positives = 320/594 (53%), Gaps = 90/594 (15%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 22 GISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYVKLKL 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCS 388
SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTM 437
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPN 444
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+ L +
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-H 495
Query: 445 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
+ P V + ++ T R+ TD N ++ +A C +
Sbjct: 496 QLLPHHVLQDKKAQAT----------------------ESRRLTDLNDNSFDLSAGCENS 533
Query: 505 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
M PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 226/601 (37%), Positives = 317/601 (52%), Gaps = 85/601 (14%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+R GI+ PISLA P + D + T++L + LR ++E + E R VL +L+
Sbjct: 19 KRYGISSPISLAVPKETDCLLTQRLIETLRPFGVFEEEGELQRRILVLEKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV P H R DFF +
Sbjct: 79 EISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IILLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 434
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F V + GM+I+ H+ R+
Sbjct: 435 RTMWVIGLGLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKE 493
Query: 442 LPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKC 501
L + L V K + +GR+ TD N + +A C
Sbjct: 494 L---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFGLSAGC 530
Query: 502 HATM--PSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGSNREKVEN 549
+M PSS+ + G SP ++ +++S N+Q + ++ S V
Sbjct: 531 ENSMSVPSSTSTMKTGPLISSSQGRNSPALAIMTASVANIQATEISLQQVNTSESSGVAL 590
Query: 550 N 550
N
Sbjct: 591 N 591
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 329/598 (55%), Gaps = 92/598 (15%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+
Sbjct: 19 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-F 434
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 490
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 498
R+ L + + P V L++K + T + R TD ++ + +
Sbjct: 491 RKEL-HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-D 529
Query: 499 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 541
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 530 SENSMTAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/461 (43%), Positives = 273/461 (59%), Gaps = 47/461 (10%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GS Q+ GIT PISLA P D D T+KL + L+ ++E +EE R +LG+L+
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRILILGKLNNL 68
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFF 365
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 379
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + +
Sbjct: 366 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENT 425
Query: 380 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 420
+K + + +GL K+ + E D+ ++ F V
Sbjct: 426 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTV 464
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 329/598 (55%), Gaps = 92/598 (15%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+
Sbjct: 18 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 375 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 434 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 489
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 498
R+ L + + P V L++K + T + R TD ++ + +
Sbjct: 490 RKEL-HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-D 528
Query: 499 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 541
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 529 SENSMTAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 193/505 (38%), Positives = 282/505 (55%), Gaps = 55/505 (10%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
+S+ G+++PIS A P +D+ T L+ L + +ES++E + R +VL LD
Sbjct: 7 ATSSTPIFGVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLV 66
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VH GADID++ V PRH TR DFF
Sbjct: 67 KDWVQKTTISRIPKDQMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRS-DFFNS 125
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
+L + PEVTEL V A VP+M K+SGV ID+L+ARL+L +PEDL+I DS+L+N
Sbjct: 126 FKDILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKN 185
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE++VRSLNGCRV +Q+L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+L
Sbjct: 186 LDEESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAIL 245
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPK 261
VARICQLYPNA PS L+ + F +++ W WP PVLL I + L VWDPRRN
Sbjct: 246 VARICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHA 305
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+YHLMPIITPA+P NS++NVS S+++++ DE ++ IC+ + +E ++W L E
Sbjct: 306 DRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEI 363
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
FF Y +++ + + AE+ + + G+ ESR+RQL +E++ + +P F D
Sbjct: 364 NFFSKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDV 422
Query: 382 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--A 435
P +F+GL+ V + D+ +++FK + ++ G Q+
Sbjct: 423 KDPKKSIWFIGLEF-----VANVKNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFT 477
Query: 436 HVTRRNLPNFVFPGGVRPSRPSKGT 460
+ R NL N + + R K T
Sbjct: 478 YEKRSNLINIISKKDLSCQRIMKKT 502
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 225/598 (37%), Positives = 327/598 (54%), Gaps = 92/598 (15%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+
Sbjct: 19 KQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-F 434
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 490
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 498
R+ L + + P V L++K + T +G + +D+ +
Sbjct: 491 RKEL-HQLLPNHV---------------LQKKETHLT-----EGVRLTAVNDSSLLLSID 529
Query: 499 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 541
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 530 SENSMTAPSPTGTIKTGPLTANPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 225/598 (37%), Positives = 328/598 (54%), Gaps = 92/598 (15%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+
Sbjct: 18 KQFGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RS NGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSFNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 375 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 434 RTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLR 489
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 498
R+ L + + P V L++K + T + R TD ++ + +
Sbjct: 490 RKEL-HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-D 528
Query: 499 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 541
++ T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 529 SENSMTAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 211/499 (42%), Positives = 292/499 (58%), Gaps = 58/499 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+R GI+ PISLA P + D + T+KL + L+ ++E +EE R +L +L+
Sbjct: 18 KRYGISSPISLAPPRETDCVLTQKLIETLKPFGVFEEEEELQRRILILEKLNYLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 ELSESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IALLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEE-F 433
Query: 386 YCSYFMG--LQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTR 439
+ +G L+R + + + +DI+ T ++QAV+ M+ + M+I+ H+ R
Sbjct: 434 RTMWVIGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEM---DMKIAAMHLRR 490
Query: 440 RN----LPNFVFPGGVRPS 454
+ LPN V P PS
Sbjct: 491 KELHQLLPNHVLPQKKTPS 509
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 204/494 (41%), Positives = 281/494 (56%), Gaps = 53/494 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA D D +KL + L+ ++E +E+ R +LG+L+
Sbjct: 2 KTFGITSPISLAAAKDTDCTLMQKLIETLKPYGVFEEEEQLQHR--ILGKLNNLVKEWIR 59
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 60 EISELKHLPQSVIENVGGKIFTFGPYRLGVHTKGADIDALCVAPRHVDRS-DFFSSFYDK 118
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 119 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 178
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 179 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 238
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 239 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 298
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK+Y
Sbjct: 299 TPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHY 356
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 390
+ + SA W G VES++R L +E++ + L H +P F S+ + F
Sbjct: 357 ILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEKEEF 415
Query: 391 -----MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 441
+GL K+ + E D+ ++ F V + + M+I+ HV R+
Sbjct: 416 RTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVDRQAINSKMFETEMKIAAMHVKRKQ 474
Query: 442 LPNFVFPGGVRPSR 455
L P V P +
Sbjct: 475 LHQLQ-PSHVSPKK 487
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/373 (49%), Positives = 234/373 (62%), Gaps = 43/373 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 331 LR----IDISAEN 339
L +D EN
Sbjct: 374 LSCISLLDTHGEN 386
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 230/361 (63%), Gaps = 39/361 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 331 L 331
L
Sbjct: 374 L 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 230/361 (63%), Gaps = 39/361 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 331 L 331
L
Sbjct: 374 L 374
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 230/361 (63%), Gaps = 39/361 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+
Sbjct: 17 KHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIR 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF ++
Sbjct: 77 EVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 331 L 331
L
Sbjct: 374 L 374
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/583 (37%), Positives = 320/583 (54%), Gaps = 87/583 (14%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+
Sbjct: 19 KQYGISSPISLAAPKDTDRELTQKLIETLQPFGVFEEEEELQRRILILQKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 79 EISESRNLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRN-DFFTSFYDK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-F 434
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSESLSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLK 490
Query: 439 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 498
R+ L + + P V L++K + T +G + +D+ +
Sbjct: 491 RKEL-HQLLPNHV---------------LQKKETHLT-----EGVRLTAVNDSSLLLSVD 529
Query: 499 AKCHATMPSSSGEFREG----------SPIMSTISSSSINLQF 531
++ + PS +G + G SP ++ +++S N+QF
Sbjct: 530 SENSMSAPSPTGLVKTGPLTGNPQGRSSPALAVMTASVTNIQF 572
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 221/593 (37%), Positives = 319/593 (53%), Gaps = 83/593 (13%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------ 59
+R GI+ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 15 AKRYGISAPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWI 74
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
VH GADID LC+ PRH R DFF +
Sbjct: 75 REISESKSLPQSILENVGGKIFTFGSYRLGVHTKGADIDALCIAPRHVDRS-DFFTSFYA 133
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L++ D
Sbjct: 134 KLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKDLDI 193
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
+++RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 194 RSIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVAR 253
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
CQLYPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPI
Sbjct: 254 TCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPI 313
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+
Sbjct: 314 ITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKH 371
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP---- 384
Y+ + SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 372 YIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKE 430
Query: 385 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTR 439
+ +GL K+ E D+ ++ F +QAV+ + + GM+I+ H+ R
Sbjct: 431 FRTMWVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAVN-SKMFETGMKIAAMHLRR 488
Query: 440 RNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNA 499
+ L + L V K + +GR+ +D
Sbjct: 489 KEL---------------------HQLLPHHVLQEKKAHSPEGRRLTDLNDRSFDLSAGG 527
Query: 500 KCHATMPSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGS 542
+ ++PSS+ + G SP ++ +++S N++ + ++ S
Sbjct: 528 ENSISVPSSTSTMKTGPLISSSQGRNSPALAVMTASVTNIRATEISLQQVNTS 580
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/436 (44%), Positives = 261/436 (59%), Gaps = 45/436 (10%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VHGPG+DIDTLCV P+H +RE DFF ML ++ VTE+ VP+A+VP++K K SG+
Sbjct: 113 VHGPGSDIDTLCVVPKHVSRE-DFFEVFEPMLKDLEGVTEVSGVPEAYVPIVKTKISGIP 171
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL--NGCRVTDQILRLVPKIQNFRTT 177
+D L ARL+L IP+DL + D++L+N DE+ VRSL G RV D+ILRLVP +Q FR
Sbjct: 172 LDFLMARLALSSIPDDLSLQDDNLLRNLDERCVRSLGATGSRVIDEILRLVPNVQVFRDA 231
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 237
LRC++ WA+RR +YSNV GFLGG+ WALLVARICQLYPNA+ +VSRFF + QW WP
Sbjct: 232 LRCIKLWAQRRAIYSNVNGFLGGVAWALLVARICQLYPNAIAGAIVSRFFIIMYQWSWPQ 291
Query: 238 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
PVLL IE+G L ++VW+P+ P D+ H MPIITPAYP M S++NV+ ST IM +EF+R
Sbjct: 292 PVLLKQIEDGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTHNVTASTQIIMTEEFKR 351
Query: 298 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 357
G +I + + A W LF FF Y+ YL++ S NAD W G VESR+RQL
Sbjct: 352 GADIVDKVIVGSA--TWSELFAKHDFFHKYRYYLQVIASTGNADLQIKWSGTVESRIRQL 409
Query: 358 TLKIERHTYNMLQCHPH--------------------PGDFSDK--------------SK 383
+K+E + +++ HP G+ SD +
Sbjct: 410 VMKLE-YVDSLILAHPFIRGFEQVSYCLSEDEVRAVAEGEISDSVAGRKKEDIEGKEGAG 468
Query: 384 PLY-CSYFMGLQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTR 439
P+Y ++++GL + P G + DI +F + V M+ + M I V H+
Sbjct: 469 PVYSTTFYIGLAIEPK-PTGATGPRRLDISYPTTDFTKLVKMWEKYDEATMGIVVRHIKS 527
Query: 440 RNLPNFVFPGGVRPSR 455
LP+ VF G RP +
Sbjct: 528 SGLPDNVFEPGERPPK 543
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 288/528 (54%), Gaps = 89/528 (16%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL------------ 57
GIT PISLA PTD + L + L+D N ES++E+++RE+VL +
Sbjct: 1 GITPPISLASPTDLEKQVDAGLIQELKDQNTIESEQESLNREKVLALVQSLVKEFVKRVS 60
Query: 58 ----------DQVHG--------------PGADIDTLCVGPRHATREEDFFGELHQMLTE 93
DQ G PGADIDTLCV P+H +RE DFF +L
Sbjct: 61 IRNGMSESLADQAGGKIFTFGSYRLGVNQPGADIDTLCVVPKHVSRE-DFFDVFEPLLKT 119
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV+ VPDA+VP++K SG+ ID L ARL+L IP+DL+++ D++L+N DE+ VR
Sbjct: 120 REEVSVCAGVPDAYVPIIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDERCVR 179
Query: 154 SLN-------GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
SLN G RVTD+ILR+VP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+L
Sbjct: 180 SLNDNLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVAWAML 239
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYPN ++++FF + QW+WP+PVLL IE+G L ++VW+P+ P D+ H
Sbjct: 240 VARICQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHR 299
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYP M S++NV ST +M EF+RG +I + + K W LF FF
Sbjct: 300 MPIITPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHK--GTTTWSQLFNKHEFFSK 357
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------ 380
YK+YL+I S + A+ + W G VES++RQL K+E + HP FS+
Sbjct: 358 YKHYLQIIASGQTAESQKKWSGAVESKVRQLVSKLEL-VDGIELAHPFVKGFSEVFICLN 416
Query: 381 -------------------KSKP--------------LYCS-YFMGLQRKQGVP-VGEGE 405
KP +Y S +++GL + P E
Sbjct: 417 DEEVQHAAEYNPSEEVKERSKKPEEYENKEAEDGIHRVYISTFYIGLAIQPRNPETNEKR 476
Query: 406 QFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGGVR 452
++ EF + ++ G M+I V ++ LP+ VF GG+R
Sbjct: 477 TLNLTYPTNEFMKLTKLWDQFVEGEMKIFVKNIKASALPDVVFEGGIR 524
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/503 (39%), Positives = 291/503 (57%), Gaps = 74/503 (14%)
Query: 2 GSSNGQ-------RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL 54
G+SNG+ LG+++PIS++GP + D++ + KL++YL+ +E++EE R +VL
Sbjct: 139 GNSNGKDNKLTTTYLGVSQPISISGPDEFDIVMSAKLDEYLQANGYFETEEEMNLRLKVL 198
Query: 55 GRLD------------------------------------QVHGPGADIDTLCVGPRHAT 78
+++ VH GADID+LCV PRH
Sbjct: 199 SKINAYVKKWVRVVSKRRQMPDSEVQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVD 258
Query: 79 REEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 138
R DFF ++ML E P TEL V +A VPV+K K+ G+ +D+L+ARL+L +PED +
Sbjct: 259 RN-DFFTSFYEMLAEDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQL 317
Query: 139 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 198
+ DSIL+N DE++VRSLNGCRV D+ILRLVP + NF LR ++ WAK G+YSNV G+L
Sbjct: 318 NDDSILRNLDEKSVRSLNGCRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYL 377
Query: 199 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG------SLGLQ 252
GG++WA+LVAR CQLYPN P+ LV +FF +YT+W WP+PV+L E +L
Sbjct: 378 GGVSWAILVARTCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQEL 437
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 312
VWDPR D++HLMPI+TPA+P NS++NV+ S+L+I+M+E + G + K +A
Sbjct: 438 VWDPRSRSGDRFHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKA-- 495
Query: 313 DWDTLFEPFTFFEAYKNYLR-IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC 371
+W LFE FF YK++L + +SA D+L W G VES++R L +ER ++ C
Sbjct: 496 EWSALFEEVNFFSRYKHFLALLCLSATEQDELV-WCGLVESKIRFLIASLERRE-SIRVC 553
Query: 372 HPHPGDFSDKSKPLYCS----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV- 420
H H + ++ PL +F+GL + V + DI+ V+ F +
Sbjct: 554 HVHTKYYQPRNDPLPVQVSLQNPRCRLWFIGLDLNKTV----SRKIDIQHEVQSFMDLLN 609
Query: 421 SMYTLRK---PGMQISVAHVTRR 440
SM T + GM + + H R+
Sbjct: 610 SMATTQNIYVEGMSV-IPHYLRK 631
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 203/479 (42%), Positives = 277/479 (57%), Gaps = 52/479 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GI+ PISLA P D D T+KL + L+ ++E +EE R +L +L+
Sbjct: 22 GISSPISLAAPKDTDCTLTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIREIS 81
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 82 ESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 140
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 141 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 200
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 201 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQL 260
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 261 YPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPA 320
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 321 YPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVL 378
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS 388
SA W G VES++R L +E++ + L Q P P + +K +
Sbjct: 379 LASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPEKEE-FRTM 437
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNL 442
+ +GL K+ E D+ ++ F +QA++ M+I+ H+ R+ L
Sbjct: 438 WVIGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINTKMFEM-DMKIAAMHLKRKEL 494
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 215/580 (37%), Positives = 303/580 (52%), Gaps = 95/580 (16%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M + G T+PIS P + ++ T +L + L +ES+EE RE+VLGR+
Sbjct: 1 MAEQEQVQWGTTKPISWNPPQEKEIKATERLMEELHHQGSFESEEEGRLREQVLGRIAGL 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VHGPG+DIDT+CV P+H +RE FF
Sbjct: 61 VKQFVEKVSVSFGFSEEAAKAAGAKIFTSGSYRLGVHGPGSDIDTICVVPKHVSREH-FF 119
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
ML M VTE+ VP+A VPV+K SG+ +D L+ARL+L IP+DL++ D++L
Sbjct: 120 TVFEPMLLNMEGVTEVSGVPEAFVPVIKAIVSGIHVDFLFARLNLTQIPDDLELKDDNLL 179
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N DE+ VRSL G RVTD+ILRLVP+ FR LR ++ WA+RR +YSNV GFLGG+ WA
Sbjct: 180 RNLDERDVRSLGGSRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGVAWA 239
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVARICQL+P + ++SRFF + QW WP P+LL AIE+G L ++VW+P+ P D+
Sbjct: 240 MLVARICQLFPKYDAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRT 299
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP M +++NV+ ST++IM +E +RG +I E + +A W LFE FF
Sbjct: 300 HLMPIITPAYPSMCATHNVTHSTMKIMQNELRRGSQIVEKI--IQAGEPWANLFEKHDFF 357
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP----------- 373
Y+ YL+I I++ N + W G VES++R L K+E + HP
Sbjct: 358 HMYRYYLQIIITSGNQEMYHKWAGTVESKIRLLVGKLELQEAVEI-AHPFTKGLDQVVCC 416
Query: 374 -------------------------HPGDFSDKSKPLYCSYFMGLQRKQGV---PVGEG- 404
H G SK ++++GL GV P G+
Sbjct: 417 LNDDEVRAVAKYEMDDEVLKRSETEHEGK-DGVSKVFMKTFYIGL----GVEPKPAGQTG 471
Query: 405 -EQFDIRLTVKEFKQAVSMYTL-RKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT-- 460
+ DI EF + V ++ L + M I + +V LP+ F GGVR + KG
Sbjct: 472 PRKLDISYPTIEFVKTVKLWDLYEEEQMGIVIRYVKHSALPDNCFEGGVRQALAGKGVKR 531
Query: 461 -----WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTH 495
D ++ L R S H G K+++ D H
Sbjct: 532 TKSKAGDGKKPLSR-TSPHDVSGDYSPHKKQRKDSLTGDH 570
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/490 (41%), Positives = 280/490 (57%), Gaps = 54/490 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GI+ PISLA P + D + T+KL + L+ ++E +EE R +L +L+
Sbjct: 19 EHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 79 EISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 434
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 441
+ +GL K+ E D+ ++ F V + + M+I+ H+ R+
Sbjct: 435 RTMWVIGLVLKKP-ENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHLKRKE 493
Query: 442 ----LPNFVF 447
LPN V
Sbjct: 494 LHQLLPNHVL 503
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/404 (44%), Positives = 247/404 (61%), Gaps = 39/404 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M +++ + + + P++ A PT +D +++LE++LR LYES +EA+ REEVLG Q
Sbjct: 1 MAAASLEDVYLLRPLNDAPPTAEDKRHSKELEEFLRASGLYESLDEAILREEVLGLFYQL 60
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGE- 86
VHGPG+D+DTL VGPR+ RE DFFG
Sbjct: 61 VQIWVKGVCRRRNLNVEDARAHVYTFGSYRLGVHGPGSDMDTLVVGPRYVLREMDFFGNE 120
Query: 87 ---LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
L +L++ P++T++ PVPDA VP++ K+ GV ID+LYA L++ +PE LD+S ++
Sbjct: 121 KHCLQYLLSQTPDITDIQPVPDAFVPMIGIKYKGVQIDVLYASLAMVTLPEQLDLSNHAV 180
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE TVRSLNGCRVTD ILRLVP FR LR ++ WA RG+ SNV G+LGG+N
Sbjct: 181 LRGCDEATVRSLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGVNL 240
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A++VA+ICQLYP A S ++ +FF + W WP + L E+ S+GL VWDPR +D
Sbjct: 241 AIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDS 300
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPF 321
LMP+ITPAYP MNS YNV STL +M EF E+C + + +DWD LF P
Sbjct: 301 LALMPVITPAYPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPV 360
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 365
FF + Y++I++SA++ DL W GWV SR+R+L +E H
Sbjct: 361 PFFTQHTFYIQIEVSADSEQDLVLWDGWVSSRIRRLVRNLEDHV 404
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/499 (36%), Positives = 284/499 (56%), Gaps = 53/499 (10%)
Query: 2 GSSNG-QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
G+++G R GIT+P+S GP++ D T +L K+L NL+E+++ RE VL L++V
Sbjct: 5 GTNDGFTRYGITDPVSTDGPSESDREDTAELMKFLVAQNLFETEDGKRKRERVLESLNRV 64
Query: 61 H-------------------------------------GPGADIDTLCVGPRHATREEDF 83
P +DID LC+ P+ TRE F
Sbjct: 65 LQQFVRKNAIKQLGIPDDEASKISAKLLTFGSYRLGIVAPNSDIDCLCLCPQSVTRE-SF 123
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F + + L +P +T+LH VPDA+ PV+K + G+ IDLL+A L +PE++D+ D+I
Sbjct: 124 FTDFYNALKLLPNITKLHAVPDAYTPVIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAI 183
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+N +E T RS+NGCRV IL VP NFRTTLR ++ WA RRG+Y+ V ++GG+ W
Sbjct: 184 LRNMNEATARSINGCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAW 243
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRR 258
A+L AR+CQLYPN +P+ L+ +FFRVY QW W PV+LC I+E G + +VWDPR
Sbjct: 244 AILTARVCQLYPNFLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRN 303
Query: 259 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVDWDTL 317
NP D+ HLMP+ITPA+P MNS++N++ +T RI+ DEF+R +++ + K + W+ +
Sbjct: 304 NPTDRQHLMPVITPAFPSMNSTHNITLTTKRILTDEFKRANDLLKVNAKGAQMKNIWERV 363
Query: 318 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
E F ++K++L I++ A W+GW+ SR+R L KIE +++ P
Sbjct: 364 LEKEDMFASHKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIETVPNILVRPWPEFFK 423
Query: 378 FSDKSKPLYCSYFMGLQRKQ-----GVPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPG 429
+ K F G + K+ + FD+R+++K FK+ ++ +T K
Sbjct: 424 YEHKEWDYASCVFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQ 483
Query: 430 MQISVAHVTRRNLPNFVFP 448
+ +++ ++ LP+FV P
Sbjct: 484 IAVNIRYLKNSQLPHFVNP 502
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 321/598 (53%), Gaps = 94/598 (15%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
R G++ PISLA P + D + T++L + LR ++E +EE R VL +L+
Sbjct: 20 RYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIRE 79
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
VH GADID LCV P H R DFF + L
Sbjct: 80 ISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRS-DFFTSFYAKL 138
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 151
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 139 KLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRC 198
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GF GG++WA+LVAR C
Sbjct: 199 IRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTC 258
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNAV S LV ++F V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 259 QLYPNAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIIT 318
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYP NS+YNVS ST +M++ F++G I + +A W LFE +FF+ YK+Y+
Sbjct: 319 PAYPQQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKA--VWSKLFEAPSFFQKYKHYI 376
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LY 386
+ SA W G VES++R L +E++ + L H +P F + K P
Sbjct: 377 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFR 435
Query: 387 CSYFMGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRR 440
+ +GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+
Sbjct: 436 TMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRK 492
Query: 441 NLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAK 500
L + L V K + +GR+ TD N + +A
Sbjct: 493 EL---------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAG 529
Query: 501 CHATM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 541
C +M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 530 CENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 285/493 (57%), Gaps = 60/493 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GI+ PISLA P + D + T+KL + L+ ++E +EE R +L +L+
Sbjct: 19 KHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQRRILILEKLNNLVKEWIR 78
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 79 EISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 137
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 138 LKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 197
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVART 257
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR +P D+YHLMPII
Sbjct: 258 CQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPII 317
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHY 375
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 376 IVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-F 434
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 438
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ H+
Sbjct: 435 RTMWVIGLVLKKP-ENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLK 490
Query: 439 RRN----LPNFVF 447
R+ LPN V
Sbjct: 491 RKELHQLLPNHVL 503
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 187/461 (40%), Positives = 270/461 (58%), Gaps = 62/461 (13%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---------- 58
LG+++PIS++GP + D++ + KL++YL+ +E++EE R +VL +++
Sbjct: 149 LGVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVLSKINAYVKKWVRIV 208
Query: 59 --------------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH GADID+LCV PRH R DFF ++ML
Sbjct: 209 SKRRQMPDSEIQSVGGKLFTFGSYRLNVHTRGADIDSLCVAPRHVDRN-DFFTSFYEMLA 267
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E P TEL V +A VPV+K K+ G+ +D+L+ARL+L +PED ++ DSIL+N DE++V
Sbjct: 268 EDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDEKSV 327
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCRV D+ILRLVP I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQ
Sbjct: 328 RSLNGCRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQ 387
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG------SLGLQVWDPRRNPKDKYHL 266
LYPN P+ LV +FF +YT+W WP+PV+L E SL VWDPR D++HL
Sbjct: 388 LYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHL 447
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPI+TPA+P NS++NV+ S+L+I+M+E + G + K + W LFE FF
Sbjct: 448 MPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKT--GWSALFEEVNFFSR 505
Query: 327 YKNYLR-IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
YK++L + +SA D+L W G VES++R L +ER ++ CH H + ++ P
Sbjct: 506 YKHFLALLCLSATEQDELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPF 563
Query: 386 YCS----------YFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
+F+GL + V + DI+ V+ F
Sbjct: 564 PVQVSLQNPRCRLWFIGLDLNKTV----SRKIDIQHEVQSF 600
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 224/595 (37%), Positives = 309/595 (51%), Gaps = 107/595 (17%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------ 59
GQ LG+T PIS+A PT DL ++ L + L+D +YES EE +RE VLGRL++
Sbjct: 3 GQFLGVTPPISVAPPTARDLEVSKTLIQELKDRGIYESAEEGRNREMVLGRLNKLVKEFV 62
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
VHGPG+DIDTL V PRH REE FF Q
Sbjct: 63 YRSSINHGLSDAKAREAGGKIFTFGSYRLGVHGPGSDIDTLLVVPRHVEREE-FFSLFEQ 121
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
ML E V E+ VP+A VP++K FSG+ IDLL+ARL++ +P+DLD+ D++L+N D+
Sbjct: 122 MLKETEGVLEVTGVPEAFVPIIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDD 181
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
+ +RSLNG RVTD++LRLVP + FR LR ++ WA++R +Y NV GF GG+ WA+LVAR
Sbjct: 182 RCLRSLNGSRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVAR 241
Query: 210 ICQLYPNAVPSMLVS--------------------RFFRVYTQWRWPNPVLLCAIEEGSL 249
ICQLYP ++S RFF + QW+WP PVLL IEEG L
Sbjct: 242 ICQLYPKGCVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPL 301
Query: 250 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 309
++VW+P+ P D+ H MPIITPAYP M S++NV+ ST +IM EF+R +I + +
Sbjct: 302 QVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGS 361
Query: 310 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 369
A W LF+P FF Y+ YL+I S+ +AD W G VESR+RQL +K+E + +L
Sbjct: 362 A--KWSELFQPHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLE-YVDTLL 418
Query: 370 QCHPHPGDFSDKSKPLYC-------------------------------------SYFMG 392
HP F + YC ++++G
Sbjct: 419 LAHPFVKSFDRVN---YCINEEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYIG 475
Query: 393 LQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMYTLRKP-GMQISVAHVTRRNLPNFVFPG 449
LQ ++ P G+ + DI EF + V M+ P M + V ++ LP +V G
Sbjct: 476 LQIERK-PAGDKGPRKLDISYPTNEFTKLVKMWDSYDPDSMGVIVRYIKSTALPAYVHAG 534
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 504
R P K R ++ S+ A TDD+ HL N K A+
Sbjct: 535 --REPEPPKTGGVKRAKTKKANGSNAATAASPALANAATDDSDAEHL-NKKHRAS 586
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/511 (38%), Positives = 290/511 (56%), Gaps = 63/511 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ G+T PIS + PT D T +L +R NLYE+ E RE++L L++
Sbjct: 22 KQWGVTPPISESLPTPQDYKLTEQLIIAMRSENLYETVEGMKKREQILASLNKMVREWIY 81
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V G+DIDTLC+ PRH TR+ FF
Sbjct: 82 EASLEHSMSEEESLTAGGGIYTFGSYRLGVVAAGSDIDTLCIVPRHITRD-SFFTFFLAK 140
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + +T++ PVPDA+ P++K + G+ +DLL+A L+L IP DL+ D +L+N DE+
Sbjct: 141 LQQDIHITKIQPVPDAYTPIIKMVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEK 200
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
T RSLNGCRV D IL+LVP ++FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARI
Sbjct: 201 TARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARI 260
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKY 264
CQLYPN+ P+ +++RFF VY W+W NPV+LC I+E G +G +VW+P NP+D+
Sbjct: 261 CQLYPNSAPNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRA 320
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPA+P MNS++NV+ +TLR++ +E QRG E+ + +E A W L+ P+ FF
Sbjct: 321 HLMPIITPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERA--QWSDLWSPYMFF 378
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKS 382
E +K+++++ + A + + W GW+ES++R L K+E T+ LQ P P SD
Sbjct: 379 ENHKHFIQVKMLANSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQESDNQ 436
Query: 383 KPLY----CSYFMGLQ------RKQGVPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPG 429
K + C Y +GL G G D+R + +F + + + K
Sbjct: 437 KDGFQFAQCMY-IGLVLCTTSGNNNGKSTGITPVVDLRGAILDFVGFIMNWNEVEIYKDS 495
Query: 430 MQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
+ + V H+ ++LP + SKGT
Sbjct: 496 IDLKVKHLRFKDLPKVLREQNNTKVLNSKGT 526
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 186/459 (40%), Positives = 278/459 (60%), Gaps = 51/459 (11%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N ++ G+T P+S+AGPT+ ++ L L+ +ES EE+ R +VLG L +
Sbjct: 58 NERQWGVTPPVSMAGPTEHEIAVNAALIDELKLRKNFESPEESDKRAKVLGELQKITLEF 117
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+ PG+DIDTL V PRH TRE +FF +
Sbjct: 118 VQKVSLDKHMTESMARDAGGKIFTYGSYRLGVYSPGSDIDTLMVVPRHVTRE-NFFTDFE 176
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
Q+L PEVT + VPDA+VP++KFKFSG+ IDL++ARL+L +P DL + +++L+N +
Sbjct: 177 QILRNRPEVTGITAVPDAYVPIIKFKFSGIPIDLIFARLALAQVPMDLTLEDNNLLKNVE 236
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ V SLNG RVTD+ILRLVP F+ LR ++ WA++R +YSNV GF GG+ WA+LVA
Sbjct: 237 ERCVLSLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGVAWAMLVA 296
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV ++++++FFR+ +QW+WP PVLL IE+G L ++VW+P+ D+ H MP
Sbjct: 297 RICQLYPNAVSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMP 356
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPAYP M S++N++ ST +++++E R +I + + + W TLF TFF YK
Sbjct: 357 IITPAYPSMCSTHNITESTQKVIINEMNRAGDIADKIL--NGTLPWSTLFAKHTFFHQYK 414
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 388
YL I ++++A+ W G VES++RQL L++E + + HP F+ + L+
Sbjct: 415 YYLVIVAASKSAEMQLKWSGLVESKVRQLVLRLE-YVDEIKLAHP----FNKSTDSLH-- 467
Query: 389 YFMGLQRKQGVPVGE-----GEQFDIRLTVKEFKQAVSM 422
Y + GV GE E +++ T+KE + +M
Sbjct: 468 YCKTEEEANGVAHGELVSTRMENINMQQTIKEMESTSNM 506
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/464 (40%), Positives = 273/464 (58%), Gaps = 60/464 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+++PISLA P D++ T +L + L+ N YE + E R EVL L++
Sbjct: 10 LGVSQPISLAHPDAKDILLTEQLVETLKKCNSYEPKAETEKRMEVLRSLNRLVKEWVKNV 69
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADIDTL V PRH R DFF +ML++
Sbjct: 70 TAIKIPSGEGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSFKEMLSQ 128
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S DS+L+N D+++VR
Sbjct: 129 DPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDSLLKNLDQESVR 188
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV +Q+L+LVP+ N+ LR ++ WAK G+YSN GF GGI+WA+L+AR CQL
Sbjct: 189 SLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGISWAILIARACQL 248
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKDKYHLMP 268
YPNA PS LV R F ++ W WP+PVLL + + G+L VWDPRR D++HLMP
Sbjct: 249 YPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTDRFHLMP 308
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPA+P NS++NV+ ST++++ E G EIC + +E WD LF+ FF YK
Sbjct: 309 IITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRDI--SEGKCGWDALFKEVNFFSRYK 366
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DF 378
+Y+ + ++A N ++ N+ G++ESR+R L +ER+ +++ H P D
Sbjct: 367 HYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQ-DIVIAHNDPNKHKPSPNAKFDV 425
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 422
S ++K + +F+GL+ V + D+ + FK V +
Sbjct: 426 SPENKRITL-WFIGLEF-----VEHTKSLDLTSEIHRFKTNVEL 463
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/501 (39%), Positives = 279/501 (55%), Gaps = 65/501 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS A + +D T L + LR + +ES +E+ +RE VLGR+
Sbjct: 6 LGVTPPISTAESSAEDQKLTESLMQELRAQSTFESDQESRTREIVLGRISALVKKFVTTV 65
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTLCV P+H R+E FF ML
Sbjct: 66 AKAHGLSDATANAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKHVNRDE-FFSVFEPMLR 124
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQT 151
E P +TE+ VPDA VP++K K G+ +DLL AR+ L IP+DL + + +L+N DE+
Sbjct: 125 EEPNITEVSGVPDAFVPIIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLDERC 184
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
++SL G R+ D+IL L+P Q FR LRC++ WA+RR +YSN+ GFLGG+ WA+LVARIC
Sbjct: 185 IKSLGGSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVARIC 244
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 271
QLYPNAV +V RFF + +W+WP PVLL IEEG L +++W+P+ P D+ H MPIIT
Sbjct: 245 QLYPNAVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIIT 304
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
P+YP MNS++NVS ST +M+ EF+RG +I ++K EA W LF TFF +++YL
Sbjct: 305 PSYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEA--SWADLFNKHTFFTDFRHYL 362
Query: 332 RIDISAENADDLRNWKGWV-----ESRLRQLTLKIERHTYNMLQC-------HPHPGDFS 379
+I SA++ W+ + E + Q+T + + C G FS
Sbjct: 363 QIVASADDQHSHDKWQLVLRLDAQEGSIIQVTRPFIKGFERIYHCISDDERRAATEGRFS 422
Query: 380 -----------DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-TLR 426
DK+ +Y + +F+GL+ K Q +I EF V + T
Sbjct: 423 DLKAAEGRPAGDKTTTVYTTAFFLGLEFKPKDGNSGTRQLNISFPTGEFCNLVKKWETYD 482
Query: 427 KPGMQISVAHVTRRNLPNFVF 447
+ M+++V H+ R LP FV+
Sbjct: 483 ETKMRVNVRHIKRSELPEFVY 503
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/287 (56%), Positives = 214/287 (74%), Gaps = 5/287 (1%)
Query: 221 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 280
MLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 281 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 340
YNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKNYLQVDIIAEDD 118
Query: 341 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 399
+DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV
Sbjct: 119 EDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGV 178
Query: 400 PVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 459
+ EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+
Sbjct: 179 KIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRH 238
Query: 460 TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 506
+ ++ + T + D + +++ D +R AK +T P
Sbjct: 239 V--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 283
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/452 (41%), Positives = 264/452 (58%), Gaps = 49/452 (10%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL----------- 57
G+++PIS A P DL T L+K L N YE QEE R +VL +L
Sbjct: 19 FGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQKI 78
Query: 58 -------DQ-----------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
DQ VH GADIDTL + PRHATR DFF QML +
Sbjct: 79 TEARYPKDQLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRA-DFFSSFKQMLAK 137
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PEVT L V +A VP+M K+SG+ ID L+ARL+L +PEDLDI D++L+N D+++VR
Sbjct: 138 DPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQESVR 197
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV + +L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+LVAR CQL
Sbjct: 198 SLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQL 257
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ-----VWDPRRNPKDKYHLMP 268
YPNA PS L+ + F +++ W+WP PVLL I + L VWDPRRN D+YHLMP
Sbjct: 258 YPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMP 317
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
I+TPA+P NS++NVS S+++++ +E + C+ ++ +W L E FF YK
Sbjct: 318 IVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQ--NGSCNWMDLLEEINFFSRYK 375
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 388
+++ + ++AE D + G+ ESR+RQL L +E++ L H +P F P
Sbjct: 376 HFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDPKKSV 434
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 420
+F+GLQ + V + D+ +++FK+ +
Sbjct: 435 WFIGLQFDENV-----KNLDLTKDIQQFKRNI 461
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 258/413 (62%), Gaps = 41/413 (9%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLG---RLDQ-- 59
N + G+TEPIS GPT + + L + L++ +ES++ R EVL RL Q
Sbjct: 2 NTKTYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H TR+ DFF
Sbjct: 62 VYTVSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFA 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ ARL++ +P DL + ++L+N D
Sbjct: 121 DIIRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLD 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV S +V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST ++++ E RG I + + + W LFE +FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYK 358
Query: 329 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
YL + S ++A++ + W G++ES+LRQL LK+E + HP+ DFS+
Sbjct: 359 FYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEVAE-GVEIAHPYVKDFSN 410
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 258/413 (62%), Gaps = 41/413 (9%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLG---RLDQ-- 59
N + G+TEPIS GPT + + L + L++ +ES++ R EVL RL Q
Sbjct: 2 NTKTYGVTEPISTNGPTPKENILNDALIQELKNRGSFESEQATKKRVEVLTLFQRLVQEF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H TR+ DFF
Sbjct: 62 VYTVSKSKNMSDSMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFA 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ ARL++ +P DL + ++L+N D
Sbjct: 121 DIIRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLD 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV S +V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST ++++ E RG I + + + W LFE +FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYK 358
Query: 329 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
YL + S ++A++ + W G++ES+LRQL LK+E + HP+ DFS+
Sbjct: 359 FYLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEVAE-GVEIAHPYVKDFSN 410
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/571 (36%), Positives = 299/571 (52%), Gaps = 97/571 (16%)
Query: 1 MGSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
M + QR G+T PIS GP+ ++ L L+ +ES EE +RE VLGR+ +
Sbjct: 1 MNQTTEQRDYGVTPPISRDGPSPQEITLAADLMTELK--GTFESAEEGRTREAVLGRVTK 58
Query: 60 ------------------------------------VHGPGADIDTLCVGPRHATREEDF 83
VHGPG+DIDTL V P+H R+ DF
Sbjct: 59 LVKEFIYQACIRRNLSEAAAKAAGGKIYTFGSYRLGVHGPGSDIDTLVVAPKHVDRQ-DF 117
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
+L + V E +PVPDA+VPV+ K G+S+D +ARL+L VIP+DL++ DS+
Sbjct: 118 MEIFLDLLQKDDWVEEANPVPDAYVPVIDAKIKGISMDFTFARLALSVIPDDLELGDDSL 177
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+N D++ VRSLNG R TD ILRLVP + FR LR +++WA+RR +YSNV+GFLGGI W
Sbjct: 178 LKNLDDKCVRSLNGSRSTDAILRLVPNVHVFRDALRAIKYWAQRRAIYSNVSGFLGGIAW 237
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
ALLVAR+CQLYPN + +V RFF + + W+WP PV+L IEEG+L ++VW+P+ P D+
Sbjct: 238 ALLVARVCQLYPNGNAATIVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDR 297
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
H MPIITPAYP M S++NV T I+ +E +RG E+ + EA W LF TF
Sbjct: 298 AHKMPIITPAYPSMCSTHNVMNCTFEIIQEELKRGQELIVRITNGEA--KWADLFTKHTF 355
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---- 379
F Y+ YL+I S ++ + + W VES+ RQL K+E + + + HP F+
Sbjct: 356 FSQYQYYLQIIASCDDEEIQKKWSKTVESKGRQLVGKLE-ESGTLARVHPFVKGFNKTYY 414
Query: 380 ------------------------DKSKPL---------YCSYFMGLQRKQGVP---VGE 403
+++K + ++++G++ + P
Sbjct: 415 TVTMQEHADIVLGNVPPAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSVTTTG 474
Query: 404 GEQFDIRLTVKEF-KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWD 462
+ DI + EF K A S + M I+V H+ LP+ VF G RP
Sbjct: 475 PRKLDISIPTSEFMKTARSWELYQNDIMGIAVRHIKNSALPDEVFEGAPRP--------- 525
Query: 463 SRRALERKVSSHTK---PGADDGRKRKQTDD 490
R+ L+R S GA ++R+ +DD
Sbjct: 526 -RKGLKRVAKSKVPIDGEGAQATKRRRPSDD 555
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/411 (43%), Positives = 251/411 (61%), Gaps = 47/411 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ G+T PIS A T D T L +R NLYES E RE VL L++
Sbjct: 18 KQYGVTPPISEAMATPQDYKLTENLIIAMRQENLYESVEGMKKREYVLASLNKLVREWIY 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V G+DIDTLC+ PRH +RE FF
Sbjct: 78 EASLEHSMNEEEALSAGGGIFTFGSYRLGVVAAGSDIDTLCIAPRHISRES-FFSFFLAK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + VT++ PVPDA+ P++K + G+ +DLL+A L+L IP DL+ D +L+N D++
Sbjct: 137 LQQDINVTKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNVDDK 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
T RSLNGCRV D IL+LVP ++FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARI
Sbjct: 197 TARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILTARI 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKY 264
CQLYPNA PS +++RFF +Y W+W NPV+LC I+E G +G +VW+P NP+D+
Sbjct: 257 CQLYPNAAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRA 316
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H+MPIITPA+P MNS++NV+ +TL ++ DE QR + I + +E ++A W ++ PF FF
Sbjct: 317 HVMPIITPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKA--TWHDVWSPFLFF 374
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 375
E +K+++++ + + N W GW+ES+LR L K+E T+ LQ P P
Sbjct: 375 EKHKHFIQVKMLSNNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWP 423
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 254/425 (59%), Gaps = 48/425 (11%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
NG+ G+T+PIS A PT + L + L++ +E++ R EVL +
Sbjct: 2 NGKAYGVTDPISTANPTPRENSLNDSLIQELKNRGSFENESATKKRAEVLALFQKMVQEF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H TRE DFF
Sbjct: 62 VYTVSKSKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFTVFE 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
Q++ + PE+ E+ VPDA VP++K +F G+SIDL+ ARL++ +P D+ + ++L+N D
Sbjct: 121 QIIRKRPELQEIASVPDAFVPIIKIEFDGISIDLILARLNVPRVPLDMTLDDKNLLKNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+LVA
Sbjct: 181 ERDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST +++M E RG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVIMSELARGAEVMNQI--NLGKSSWSALLERHDFFHKYK 358
Query: 329 NYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 387
YL I + ++D+ W G VES+LR L LK+E T + HP+ DFSD
Sbjct: 359 FYLCIVAATTSSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSD------- 410
Query: 388 SYFMG 392
SY +G
Sbjct: 411 SYILG 415
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/503 (39%), Positives = 286/503 (56%), Gaps = 71/503 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
G+T P+++ P D D+ R+ +L LR +NLYE+ + RE VL L++
Sbjct: 116 FGVTNPVNMKLPQDADIHRSNELISVLRALNLYETAAGNLLRERVLNELNRIVVEWVVEV 175
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V PG+DIDTLCV PRH TRE FF LH L
Sbjct: 176 GMEQGLDEQEARQAGGKIFTFGSYRLGVTTPGSDIDTLCVTPRHVTREA-FFKILHAKLQ 234
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 151
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 235 QDARVSKLTPVPDAYTPVLKFNFDGVEIDLLFARLPLPVIPSSWNSLENDFVLRHVDEKT 294
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
RS+NG RV D +L+LVP + F+ TLR ++ WAK RG+YSNV G+LGGI+WA+LVAR C
Sbjct: 295 ARSVNGSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGISWAILVARCC 354
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIE----EGSLGLQVWDPRRNPKDKYHL 266
QLYPN PS L+ RFF VY+ W+W N PVLLC I+ EG ++W+P+ N +D++HL
Sbjct: 355 QLYPNFAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHL 414
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 322
+PIITPA+P MNS++NVS ST R++ DEF I + +K + ++ W + +P
Sbjct: 415 LPIITPAFPSMNSTHNVSLSTKRVITDEFANAKRIFDVWDKKK-EISWTEALHLVLKPLD 473
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH-PGDFSDK 381
F ++K++L + I A+N R W GWVES++R L ++ER + C P G + K
Sbjct: 474 -FTSFKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLER----LAACPPFAAGGHTPK 528
Query: 382 S------KPLYCSYFM---GLQRKQG--VPVGEGEQ---FDIRLTVKEFKQAVSMYTLR- 426
S +P+ C++ G + V + +Q D+R EF ++ + R
Sbjct: 529 SEAAMTVRPIPCTFSFQEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQWPERA 588
Query: 427 --KPGMQISVAHVTRRNLPNFVF 447
+ +Q+ V HV R LP +V
Sbjct: 589 QLEGQIQLRVKHVRRSQLPAYVL 611
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/495 (38%), Positives = 274/495 (55%), Gaps = 68/495 (13%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL------- 57
N + LG+T IS+A P DL RT +L++ L+ N++ES+EE R E+L +L
Sbjct: 21 NLRTLGMTSAISMAEPKLSDLSRTNELKEALKPYNVFESEEELNHRMEILSKLNALVKQW 80
Query: 58 ---------------DQ--------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
DQ VH GADID LCV PRH R D+F
Sbjct: 81 IRDTSIARNMPPNVADQVGGKIYTFGSYRLGVHHKGADIDALCVVPRHINR-SDYFSSFF 139
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
+L EVT+L V +A+VPV+K F G+ ID+L+A+L+L +P+ +D+ D +L+N D
Sbjct: 140 DLLKSQMEVTDLRAVEEAYVPVIKMNFDGIEIDMLFAKLALKEVPDSMDLRDDMLLKNLD 199
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
++ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVA
Sbjct: 200 QKCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVSWAMLVA 259
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
R CQLYPNAV + L+ +FF V++QW+WP PVLL + E +LG QVWDPR
Sbjct: 260 RTCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPR----------- 308
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
V+ S IM + F+ G I E + +A WD LFEP FF Y+
Sbjct: 309 --------------VTMSDRTIMQEAFETGLAITEEIIMGKA--SWDKLFEPPNFFGKYR 352
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPL 385
+Y+ + S+ A+D W G VES++R L +ER+ N+ H +P F ++
Sbjct: 353 HYIVLLASSSTAEDQLEWCGLVESKIRHLIGTLERNP-NITLAHINPESFPPLKPEAGKH 411
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
+F+GL K+G + DI+ V+ ++ L K GM I HV R++L N+
Sbjct: 412 VSMWFIGLTFKKGENLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRKDLSNY 471
Query: 446 VFPGGVRPSRPSKGT 460
+ ++ R + +
Sbjct: 472 IAANQIKRERKTSSS 486
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 201/521 (38%), Positives = 279/521 (53%), Gaps = 78/521 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQ 188
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQ
Sbjct: 189 RSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQ 248
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPII 270
LYP A P+ ++ +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+I
Sbjct: 249 LYPAAAPATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVI 308
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF YK Y
Sbjct: 309 TPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKTY 367
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-------------- 376
+++ SA +D +++W G VESR+R L +E +T ++ HP G
Sbjct: 368 VQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRLFYCLTEEEQ 426
Query: 377 ------------------DFSDKS-KPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
D DK + +Y S+F+GL+ ++ G ++ K+F
Sbjct: 427 AAASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKF 486
Query: 417 KQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 455
AV + M++SV R LP++VFP G+ S+
Sbjct: 487 -CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 526
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 172/412 (41%), Positives = 255/412 (61%), Gaps = 41/412 (9%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N + G+TEPIS GPT + + L + L++ +ES++ R EVL Q
Sbjct: 2 NTKTYGVTEPISTNGPTPKENILNDTLIQELKNRGSFESEQATKKRVEVLTLFQQLVQEF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H TR+ DFF
Sbjct: 62 VYTVSKSKNMSDAMAQDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFA 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ A+L++ +P DL + ++L+N D
Sbjct: 121 DIIRKRPELEEIACVPDAYVPIIKIEFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLD 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV S++V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP
Sbjct: 241 RICQLYPNAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST ++++ E RG I + + + W LFE FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILAELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYK 358
Query: 329 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
YL + + ++A++ + W G++ES+LRQL LK+E + HP+ DFS
Sbjct: 359 FYLCVVAATIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 409
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/490 (38%), Positives = 279/490 (56%), Gaps = 66/490 (13%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+++PIS+A P DL T +L + L++ YE +EE R EVL L++
Sbjct: 12 LGVSQPISVAYPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNV 71
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADIDTL V PRH R DFF +ML +
Sbjct: 72 TAIKIPSGDGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNQ 130
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P++ ++S D +L+N D +++R
Sbjct: 131 DPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDAESIR 190
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV +Q+L+LVP+ + F T LR ++ WAK G+YSN GF GGI+WA+L+AR CQL
Sbjct: 191 SLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQL 250
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMP 268
YPNA PS LV R F +++ W WP+PVLL + +L VWDP + DK+HLMP
Sbjct: 251 YPNASPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMP 310
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPA+P NS++NV+ S+ +I+ DE EICE + N+ W LFE FF YK
Sbjct: 311 IITPAFPEQNSTHNVTRSSSQIIKDEIWEALEICEQI--NDGKAKWKDLFEEVNFFSRYK 368
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DF 378
+++ + ++A N ++ ++ G++ESR+R L +ER+ +++ H P D
Sbjct: 369 HFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSKNAKFDV 427
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QI 432
S ++K + +F+GL+ + D+ ++ FK + G+ +I
Sbjct: 428 SPENKRITV-WFIGLEFSE-----HATSLDLTNEIQRFKTNFELQASSVKGIGPTCQVEI 481
Query: 433 SVAHVTRRNL 442
+ HV +RNL
Sbjct: 482 DMFHVKQRNL 491
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/481 (41%), Positives = 274/481 (56%), Gaps = 50/481 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 KHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIR 77
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 78 EISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDK 136
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA LVAR
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAXLVART 256
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHL PII
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPII 316
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVS ST + ++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSVSTRXVXVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 374
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 385
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 375 IVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-F 433
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRN 441
+ +GL K+ E D+ ++ F V + + I+ HV R+
Sbjct: 434 RTXWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKXFEVDXKIAAXHVKRKQ 492
Query: 442 L 442
L
Sbjct: 493 L 493
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 171/404 (42%), Positives = 245/404 (60%), Gaps = 39/404 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M ++ + + P++ + P+ +D + +LE++LRD LYE E+A R+EVLG +
Sbjct: 1 MAVADPNDVYLLRPLNNSLPSAEDKRHSAELEQFLRDAGLYEPDEDAYLRQEVLGLFYEL 60
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGE- 86
VHGPGAD+DTL VGPR+ R+ DFFG
Sbjct: 61 TQTWVKGVCRKKNLNVEDARAHVYTFGSYRLGVHGPGADMDTLVVGPRYVLRDSDFFGSE 120
Query: 87 ---LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
L ML++ P++T++ PVPDA VP++ K+ GV ID+LYA L++ +PE LD+S ++
Sbjct: 121 KHCLEYMLSQTPDITDIQPVPDAFVPMIGIKYKGVQIDILYASLAMQTLPEQLDLSNHAV 180
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE TVR+LNGCRVTD +L+LVP+ + FRT LR ++ WA RG+ SNV G+LGG+N
Sbjct: 181 LRGCDEPTVRALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGVNL 240
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A++VA+ICQLYP A S ++ +FF + W WP + L EE SLGL VWDPR +D
Sbjct: 241 AIMVAKICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDS 300
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPF 321
LMP+ITPAYP MNS YNV STL +M +EF ++C + ++W LF P
Sbjct: 301 LALMPVITPAYPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPV 360
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 365
FF + Y+++++SA++ DL W GWV SR+R+L +E H
Sbjct: 361 PFFTQHSFYIQLEVSADSEGDLVLWDGWVSSRIRRLVRNLEDHV 404
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 277/521 (53%), Gaps = 77/521 (14%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S LG+T P++ P L T L +R NL+E+ RE VLGRLD
Sbjct: 2 SEPHYLGVTRPVTTDPPKPHSLRMTESLMAEMRARNLFETDAGERRRESVLGRLDGMVKE 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPGADIDTLCV P + R DFF
Sbjct: 62 FVRRACQLRGRSQSEIDEAGGKIFTFGSYRLGVHGPGADIDTLCVVPVYVERA-DFFTIF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
ML E +V ++ +P+A+VP++K KF+ V IDL +AR++ +P+DL++ D++L+
Sbjct: 121 LDMLRERDDVRDITDIPEAYVPLIKVKFTNVEIDLTFARINRPTVPDDLELGDDNLLKQL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ VRSLNG RVTDQILRLVP I FR +LR +++WAKRR VY+NV GF GG++WA+LV
Sbjct: 181 DERDVRSLNGSRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPN P ++SRFF ++ W+WP PVLL +++G L ++VW+P N D+ H M
Sbjct: 241 ARICQLYPNECPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M S++N+S S++ ++ E++RG I + + W LFEP FF Y
Sbjct: 301 PVITPAYPSMCSTHNISHSSMAVIKAEWERGENIVNRIAVGQT--TWAELFEPTDFFYKY 358
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCHPHP 375
+ YL+I S+++ D+ W G VES+LR L +E H Y C
Sbjct: 359 RYYLQITASSQDMDNQLKWSGTVESKLRTLGANLEGAEGVTLAHIYVDEFEKTYSCKTEE 418
Query: 376 ----------------------GDFSDKSKPLYCSYFMGLQRKQGVPVGEG-EQFDIRLT 412
D K ++++GL G P G G ++ D+
Sbjct: 419 EVKLVASGASTPEISARTEDDIKDVEGAVKLHTSNFYIGLSIDLG-PKGSGSKKLDLSYP 477
Query: 413 VKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
EF + V + P M I+V ++ LP+FVF G RP
Sbjct: 478 TCEFTKLVKRWEKYTPEMGITVRYMKNIALPDFVF--GDRP 516
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 173/392 (44%), Positives = 246/392 (62%), Gaps = 39/392 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT PIS A T+ + L L++ NL+ES E+ R +VL L Q
Sbjct: 4 KQWGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTEFVK 63
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V+GPG+DIDTL V P+H +R+ +FF +L M
Sbjct: 64 KVSLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRD-NFFQDLEPM 122
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E EVT+L VPDA+VP++KFKF G+SIDL++ARLS+ +P DL++S +++L+ +E+
Sbjct: 123 LREREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEER 182
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
V SLNG RVTDQIL+LVP F+ LR ++FWA+RR +Y+NV GF GG+ WA++VARI
Sbjct: 183 CVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVARI 242
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P DK H MPII
Sbjct: 243 CQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPII 302
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M +++N++ ST I++ E R EI + + + W LF+ FF YK+Y
Sbjct: 303 TPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKHY 360
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
L I +A+ A+ W G VES+LR L ++E
Sbjct: 361 LTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 274/523 (52%), Gaps = 82/523 (15%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQ 188
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQ
Sbjct: 189 RSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQ 248
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPII 270
LYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+I
Sbjct: 249 LYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVI 308
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF YK Y
Sbjct: 309 TPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKTY 367
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC--- 387
+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 368 VQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLTE 423
Query: 388 ----------------------------------SYFMGLQRKQGVPVGEGEQFDIRLTV 413
S+F+GL+ ++ G ++
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPS 483
Query: 414 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 455
K+F + + M + + R LP++VFP G+ S+
Sbjct: 484 KKFCAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 526
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/570 (36%), Positives = 298/570 (52%), Gaps = 95/570 (16%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G+ + G+T PIS+A P DL ++++LE L + L+ES E R +VLGR+++
Sbjct: 10 GTRGEKYPGVTAPISVALPRPVDLDKSKELEAVLHEFGLFESASELDHRLQVLGRINELV 69
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADIDTLCV PRH R DFF
Sbjct: 70 QQWIQEVSIAKGVPENIASSTRGKIFTFGSYRLGVHTKGADIDTLCVAPRHVERT-DFFT 128
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + P+V +L V +A+VPV+K +F G+ D+L+ARL+L IP D ++ ++L+
Sbjct: 129 SFVELLKQQPQVRDLRAVEEAYVPVIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLK 188
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D + VRSLNGCRVTD+IL LVP I FRT LR ++ WAK++GVYSNV G+LGG++WA+
Sbjct: 189 NLDAKCVRSLNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAM 248
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL---CAIEEGSLGLQVWDPRRNPKD 262
LVAR CQLYP+A +++V +FF V++QW WP PV L A + G VWD R N D
Sbjct: 249 LVARTCQLYPHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVAD 308
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+YHLMPIITP YP NS++N S ST IM F+ G + E + K + W LF P
Sbjct: 309 RYHLMPIITPVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKG--TWHDLFSPPE 366
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER-----------HTYNMLQ- 370
FF YK ++ + A +DL W G VES++R L + +ER +YN ++
Sbjct: 367 FFGQYKTFIMLTAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKE 426
Query: 371 -------------------CHPHPGDFSDKSKPLY------CSYFMGLQRKQGVPVGEGE 405
P + +K++P ++F+GL Q E
Sbjct: 427 DKPPAEPVKEQQEESPKASAETEPNETEEKAEPKPQEETEGVNWFIGLHFGQ---TKEKL 483
Query: 406 QFDIRLTVKE-----FKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT 460
D+ V+ F+QA ++ L K GM + V + RR+L + P V P
Sbjct: 484 NLDLTENVRNLRDVIFRQAENIKIL-KDGMDVEVRVLKRRDLATVLPPEEVALLPPP--- 539
Query: 461 WDSRRALERKVSSHTKPGADDGRKRKQTDD 490
+ +R RK S + A++ KR + DD
Sbjct: 540 -EKKRKSIRKASEES---AENPSKRIKEDD 565
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 249/408 (61%), Gaps = 41/408 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A PT + L L+ +ES++ R E+L L +
Sbjct: 7 GVTAPISTANPTPKENALNDSLIAELKARGSFESEQATRKRVEILALLQKMVQEFVYTVS 66
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GPG+DIDTL V P+H RE DFF QM+ +
Sbjct: 67 KKKNMSDGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVVRE-DFFTIFDQMIRQ 125
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PE+ E+ VPDA VP++ +FSG+SIDL++ARL++ +P D+ + +++L+N DE +R
Sbjct: 126 RPELEEITAVPDAFVPIIMIEFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDENDMR 185
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
+LNG RVTDQIL+LVPK+ F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQL
Sbjct: 186 ALNGTRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVARICQL 245
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+ITPA
Sbjct: 246 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITPA 305
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP M +++N+++ST +++M+E +RG E+ + N W LF+ FF YK YL I
Sbjct: 306 YPSMCATHNINSSTQKVIMNELERGSELMAQISLNNK--TWADLFQRHDFFHRYKFYLCI 363
Query: 334 DISAENADDLRN-WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
+ E ++ + W G VES+LR L K+E T + HP+ DFSD
Sbjct: 364 IAATEGTNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 200/474 (42%), Positives = 277/474 (58%), Gaps = 48/474 (10%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GS+ Q+ G+T IS AGP DL T++LE+ L ++ES++E R VL +L++
Sbjct: 8 GSNPPQKSFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIVLAKLNEL 67
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH GADIDTL V PRH R DFF
Sbjct: 68 VKEWIVEVSIKKNMPENVAKTVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIDRA-DFF 126
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
+ +L P+V EL V +A VPV+K F + +DLL+ARL+ IP++LD+ +++L
Sbjct: 127 SSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLL 186
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N D + VRSLNGCRVTD+ILR VP I++FR TLR ++ WAK+ GVYSNV GFLGG++WA
Sbjct: 187 KNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWA 246
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPK 261
+LVAR CQLYPNA S L+ +FF V+++W WPNPVLL I E LG Q+WDPR NP
Sbjct: 247 ILVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPG 306
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+YHLMPIITPAYP N S++VS ST +IM DEF + E + +A +WD LF P
Sbjct: 307 DRYHLMPIITPAYPQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKA--NWDILFTPP 364
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP---GDF 378
FF YK+Y+ + S+ ++ W G VES++R L +E + Y L H +P G
Sbjct: 365 NFFHKYKHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPL 423
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV-KEFKQAVSMYTLRKPGMQ 431
+ + +F+GL ++ V ++I++ K QAV + L+K +Q
Sbjct: 424 DSEGEKHVTRWFIGLMCEKLENVNINLTYEIQMFENKVHTQAVKIMMLKKEWLQ 477
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 190/503 (37%), Positives = 281/503 (55%), Gaps = 66/503 (13%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+++PISLA P D+ +T L + L+ YE +EE R EVL L++
Sbjct: 12 LGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNV 71
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADIDTL V PRH R DFF +ML
Sbjct: 72 TAMKIPNGEGVNAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNN 130
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+++VR
Sbjct: 131 DPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQESVR 190
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV +Q+L+LVP+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR CQL
Sbjct: 191 SLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVARACQL 250
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMP 268
YPNA PS LV R F +++ W WP+PV+L + +L VWDPRR D++H+MP
Sbjct: 251 YPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMP 310
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPA+P NS++NV+ ST ++ +E EIC + +E W LFE FF YK
Sbjct: 311 IITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDI--SEGKSKWTALFEEVNFFSRYK 368
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DF 378
+++ + ++A N ++ N+ G++ESR+R L +ER+ +++ H P D
Sbjct: 369 HFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERN-QDIIIAHNDPNKHKPSPNAKFDV 427
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QI 432
+ ++K + +F+GL+ + + D+ ++ FK V + G+ QI
Sbjct: 428 NPENKRVTV-WFIGLEFAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNCQVQI 481
Query: 433 SVAHVTRRNLPNFVFPGGVRPSR 455
+ +V R +L + +R R
Sbjct: 482 DMFYVKRNSLIQVISAADLRRGR 504
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 279/490 (56%), Gaps = 66/490 (13%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+++PIS+A P DL T +L + L++ YE +EE R EVL L++
Sbjct: 37 LGVSQPISVAHPDAKDLALTEQLIETLKEFKSYEPKEETDKRLEVLRALNRLVKEWVKNV 96
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADIDTL V PRH R DFF +ML +
Sbjct: 97 TAIKIPSGDGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRS-DFFTSFKEMLNQ 155
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P++ ++S D +L+N D +++R
Sbjct: 156 DPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDPESIR 215
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV +Q+L+LVP+ + F T LR ++ WAK G+YSN GF GGI+WA+L+AR CQL
Sbjct: 216 SLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIARACQL 275
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMP 268
YPNA PS LV R F +++ W WP+PVLL + + +L +WDPR D++HLMP
Sbjct: 276 YPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRFHLMP 335
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPA+P NS++NV+ ST +I+ DE EIC + A W LFE FF YK
Sbjct: 336 IITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRA--KWSALFEEVNFFSRYK 393
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------DF 378
+++ + ++A N ++ ++ G++ESR+R L +ER+ +++ H P D
Sbjct: 394 HFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSKNAKFDV 452
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM------QI 432
S ++K + +F+GL+ + + D+ ++ FK V + G+ +I
Sbjct: 453 SPENKRITV-WFIGLEFAE-----HAKNLDLTNEIQRFKTNVELQASSVKGIGPTCQVEI 506
Query: 433 SVAHVTRRNL 442
+ +V R NL
Sbjct: 507 DMFYVKRNNL 516
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 275/524 (52%), Gaps = 84/524 (16%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDLLDIEKDEILRGVDDASQ 188
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQ
Sbjct: 189 RSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQ 248
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPII 270
LYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+I
Sbjct: 249 LYPAAAPATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVI 308
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M S++N+++ST+ I+ E R +I + + K W LFE FF YK Y
Sbjct: 309 TPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGS-SWIPLFEKVDFFSMYKTY 367
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC--- 387
+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 368 VQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLTE 423
Query: 388 ----------------------------------SYFMGLQRKQGVPVGEGEQFDIRLTV 413
S+F+GL+ ++ G ++
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLFYPS 483
Query: 414 KEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 455
K+F AV + M++SV R LP +VFP G+ S+
Sbjct: 484 KKF-CAVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSK 526
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 250/396 (63%), Gaps = 41/396 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S+A T + +L + L+ N +E+++E +R +VL L +
Sbjct: 2 NYQKVYGITGPVSIAQSTAAENKLNDELVQELKKENSFETEQETANRVKVLEILQKLTEN 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVFKVSKNKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E PE+ E+ PVPDA VPV+K KFSG+SIDLL ARL + +P +L +S ++L+N
Sbjct: 121 DSLLRERPELEEIAPVPDAFVPVIKVKFSGISIDLLCARLDIAQVPLNLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR TLR ++ WA+RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKELRALNGTRVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF+++++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST I++ EF RG ++ + N+ +W LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKTIILKEFARGVQVTNDIFSNKG--NWGDLFKKHTFFYEY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I S D+ W G VES+LR L LK+E
Sbjct: 359 KFYLTITASTRGTDEEHLKWSGLVESKLRLLILKLE 394
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 303/572 (52%), Gaps = 106/572 (18%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------ 59
++ GIT PIS A PT+ + L L+ NL+ES +++ R VL L
Sbjct: 3 SKQWGITPPISTAPPTEKENALNTALVNELKAQNLFESAQDSEKRVRVLQELQAITTEFV 62
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
V+GPG+DIDTL V P+H +RE +FF +L
Sbjct: 63 RKVSLSKHMSEKMASESGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRE-NFFQDLEP 121
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
ML PE+T+L VP+A+VP++KFKF G+SIDL++ARLS+ +P DL++S ++L+ +E
Sbjct: 122 MLRARPEITDLAAVPEAYVPIIKFKFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEE 181
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
+ + SLNG RVTDQIL+LVP F+ LR ++FWA+RR +Y+NV GF GG+ WA++VAR
Sbjct: 182 RCILSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVAR 241
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
ICQLYPNAV +++VS+FFR+ +QW WP PVLL I++G L ++VW+P+ P DK H MPI
Sbjct: 242 ICQLYPNAVSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPI 301
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP M +++N++ ST +++ E R I + + + W LFE FF Y+
Sbjct: 302 ITPAYPSMCATHNITPSTQTVILREMARAGLIVDDIMAGKK--PWSALFEKHDFFHRYRY 359
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTYN-----MLQCHPH--- 374
YL + +++ AD W G VES+LR ++E H +N + C
Sbjct: 360 YLTVTAASKTADSQLKWSGLVESKLRHFVTRLELVDAITLAHPFNKGFNKIYMCKTEEEA 419
Query: 375 ---------------------------------PGDFSDKSK-PLY-CSYFMGL--QRKQ 397
GD +D+ K +Y ++++GL +RK+
Sbjct: 420 QQVANGVSTAVVAKDANLEEAAKAGDQNEHKEGEGDAADEKKFSVYTTTFYIGLEIERKK 479
Query: 398 GVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVF-PGGVRPSR 455
G + ++ DI +EF + + M + + + LP+ VF PG RP
Sbjct: 480 G---PQSKRLDITWPSQEFSEMCKKWDKFDDTMMTVFIKNTRNYTLPDEVFEPGEERPKP 536
Query: 456 PSKGTWDSRRALERKVSSHTKPGADDGRKRKQ 487
P+K ++++S K +D ++Q
Sbjct: 537 PTK----------KRIASAEKKTENDQVPKRQ 558
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 278/490 (56%), Gaps = 57/490 (11%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD--------- 58
+ GIT+P+S GPT++DL +R+L L+ NLYE++E RE++L L+
Sbjct: 12 QYGITDPVSHEGPTNNDLKASRELLNLLKSHNLYETEEGKKRREDILESLNRLLQQFVRR 71
Query: 59 --------------QVHG--------------PGADIDTLCVGPRHATREEDFFGELHQM 90
QV G P +DID LC+ PR TRE FF + +
Sbjct: 72 QAKITRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNT 130
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L ++ +++L VPDA+ PV+K F +SID+L+A L + +++ D+IL+N ++
Sbjct: 131 LNKVDGISKLQAVPDAYTPVIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRS+NGCRV IL VP FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 265
CQLYPN P+ L+ +FFRVY+ W+W PV LC I+E G + +VWDPR NP+D++H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPA+P MNS++NV+ +T R++ +E R EI + ++ W+ + E F
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVEL-WEKVLEEEDVFS 369
Query: 326 AYKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIER--HTYNMLQCHPHPG--DFSD 380
YK++L I++ N N W+GW+ SR+R L ++E +TY P PG F D
Sbjct: 370 NYKHFLVIEVYGSNEHVAHNKWEGWIGSRMRFLISRLENLGNTY----IRPIPGFFKFED 425
Query: 381 KSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHV 437
+ S F + GV V + DIR +V+ FK ++ ++ + K QIS + H+
Sbjct: 426 DNWDYASSAFFAFKVISGV-VETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHL 484
Query: 438 TRRNLPNFVF 447
LP++V
Sbjct: 485 KNNQLPDYVL 494
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/427 (44%), Positives = 257/427 (60%), Gaps = 35/427 (8%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV- 118
VHG GADIDTLC+ PR TR+ DFF L ++L E E +EL PV A P++ KFSGV
Sbjct: 143 VHGRGADIDTLCIAPRGVTRD-DFFQSLVELLREQSETSELTPVTGAFTPIITLKFSGVD 201
Query: 119 ----------SIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 167
IDLL+A L + + E+L++ ++IL+N D TVRS+NG RV + IL+L
Sbjct: 202 NRSLASSAPLKIDLLFAELPGVLSVSENLNVMDNAILRNCDMATVRSVNGSRVANYILQL 261
Query: 168 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 227
VP NFR LR ++ WA RGVYSN GFLGGI WA+LVAR CQLYP + S +V+RFF
Sbjct: 262 VPDRDNFRMALRAIKLWANNRGVYSNKLGFLGGIAWAILVARTCQLYPKSSASTIVARFF 321
Query: 228 RVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 286
RV+ W WP PV L A+EE SL L W+P N D HLMPIITPAYP MNS++NVS S
Sbjct: 322 RVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPIITPAYPSMNSTHNVSMS 381
Query: 287 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI-SAENADDLRN 345
TLR+M +EF RG ++ +E + V W LFE FF YK Y++I + EN D+ R
Sbjct: 382 TLRVMTEEFARGMQVTLDIEVGK--VGWPVLFEKNNFFTRYKTYIQISARTEENQDEHRQ 439
Query: 346 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKPLYCSYF---MGLQRKQ 397
W+G+VES+LR +E + HP+P FS + +P+Y + F M ++++
Sbjct: 440 WEGFVESKLRMFLQWLE-SAPGVDYVHPYPKTFSQTDTTESGQPVYLTIFYFGMMFKKQE 498
Query: 398 GVPVGEGEQFDIRLTVKEFKQAV---SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPS 454
G + ++ V++F++A+ + + P + + V + R LP VF GGVRP+
Sbjct: 499 GT---DPRVIELGNIVRDFREAIKNQNASFVNNPRVDLVVLPMKRPQLPENVFEGGVRPA 555
Query: 455 ---RPSK 458
RP K
Sbjct: 556 PTKRPKK 562
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 36/51 (70%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
G+T P+ +A P+ D+ +R+LE+ LRD +L+E++EEA +R+ +L D +
Sbjct: 10 GMTPPLLIADPSPRDVELSRQLEQTLRDHDLFETEEEAQTRQLLLCSSDLI 60
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 200/525 (38%), Positives = 277/525 (52%), Gaps = 85/525 (16%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PI+ P +D+ + L L +N +ES +E RE +L + Q
Sbjct: 10 LGVTPPITTDPPKPNDIKSSEALMADLVALNQFESDQERKVRERLLSNIAQLVAKFVHDV 69
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDT+CV PRH RE FFGE ML
Sbjct: 70 SIKLGMSEKIASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHIYREH-FFGEFQDMLR 128
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ +
Sbjct: 129 AWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDDASQ 188
Query: 153 RSLN-GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
RSLN G RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARIC
Sbjct: 189 RSLNAGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARIC 248
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPI 269
QLYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H MP+
Sbjct: 249 QLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPV 308
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF YK
Sbjct: 309 ITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMYKT 367
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 387
Y+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 368 YVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYCLT 423
Query: 388 -----------------------------------SYFMGLQRKQGVPVGEGEQFDIRLT 412
S+F+GL+ ++ G ++
Sbjct: 424 EEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYP 483
Query: 413 VKEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 455
K+F AV + M++SV R LP++VFP G+ S+
Sbjct: 484 SKKF-CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 527
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/434 (40%), Positives = 249/434 (57%), Gaps = 49/434 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS P D+ + L K L +N +ES++E RE +L + Q
Sbjct: 7 GVTPPISTDPPRPSDIQASEALMKDLIALNQFESEQERKVRERLLSNIAQLVTKFVHDVS 66
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPG+DIDT+CV PRH +E FFGE +ML
Sbjct: 67 IKSGLSEKVASEAGGRIYTSGSYRLGVHGPGSDIDTICVCPRHVFKEH-FFGEFKEMLRA 125
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
P VTE+ V A VPVMK SGV +DLL+AR++L + LD+ +D IL+ D+ + R
Sbjct: 126 WPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLAEAGDKLDLEKDEILRGVDDASQR 185
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
LNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL ARICQL
Sbjct: 186 GLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTARICQL 245
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIIT 271
YP A P+ +V++FF ++ QW WPNPVLL IE G + VW+P+ + +D H MPIIT
Sbjct: 246 YPTAAPATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIIT 305
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PAYP M +++N++ ST+ ++ +E R ++ + + N W LFE FF YK+Y+
Sbjct: 306 PAYPSMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGS-SWMELFEQIDFFSMYKSYV 364
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 391
++ SA ++ +++W G VESR+R L +E ++ N++ HP G S + F+
Sbjct: 365 QVIASASTSEGIKDWGGTVESRIRTLVQDLE-NSDNIITAHPQMGGIS--------ATFL 415
Query: 392 GLQRKQGVPVGEGE 405
L ++ +GE
Sbjct: 416 CLTEEEQAAASQGE 429
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 283/521 (54%), Gaps = 68/521 (13%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL------ 54
M +S ++ G T PIS A PT +L L L+ N +E+ E R ++L
Sbjct: 1 MATSQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 55 --------GR---LDQ-------------------VHGPGADIDTLCVGPRHATREEDFF 84
GR L Q V+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ L + + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERLAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG---- 376
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P
Sbjct: 358 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIEVAHPFPKAHVA 416
Query: 377 -----------------DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 419
+ S+ +Y++GL+ K VP G DI FK
Sbjct: 417 ALESANGSINMPGLGQTEESNNHTLHTTTYYIGLELKPLVP-GASRSLDISSETHMFKNM 475
Query: 420 VSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRPSK 458
+ + +PG+ +++ HV +LP VF PG RP RP K
Sbjct: 476 CTSWAQYQPGINDLTITHVRNYDLPEDVFHPGETRPVRPKK 516
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 199/533 (37%), Positives = 293/533 (54%), Gaps = 91/533 (17%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PISLAGPT + + +L + L+ +ES+ E R EVL L
Sbjct: 8 GVTPPISLAGPTPAENVLNDQLIQELKKQGNFESESETKKRIEVLQLLQNLATNFVYKVS 67
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GPG+DIDTL V P+H TR+ DFF ++L
Sbjct: 68 KNKNMSEGMAKDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVFDELLRT 126
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
E+ E+ PVPDA VP++K K SG+ IDL+YA+L L +P +L + ++L+N DE+ +R
Sbjct: 127 RSELEEIAPVPDAFVPIIKVKISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDEKDLR 186
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RVTD+IL+LVPK F+ +LR ++ WA+RR +Y+N+ GF GG+ WA+LVARICQL
Sbjct: 187 SLNGTRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVARICQL 246
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV S++VS+FF + TQW WP PVLL IE+G L ++VW+PR P+D+ H MP+ITPA
Sbjct: 247 YPNAVSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPA 306
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP M +++N++ ST +++++E QRG I + ++ W+ LF FF YK YL I
Sbjct: 307 YPSMCATHNITASTQKVILNELQRGSLIMNDIISHKK--QWEDLFVKHDFFYKYKFYLNI 364
Query: 334 DISAENADDLRN--WKGWVESRLRQLTLKIER-------HTY--------------NMLQ 370
I+ DD ++ W G VES+LR L K+E H Y + +
Sbjct: 365 -IAFTRGDDEQHLKWSGLVESKLRLLVQKLENFQGINLAHPYVKTFEKSYLYSSDEELRE 423
Query: 371 CHPHPGDFS--------------DKSKPL--------YCSYFMGLQRKQGVPVGEGEQFD 408
+ G+FS +K P+ + S ++GL GE ++FD
Sbjct: 424 IELNFGNFSKESNLKKFKEITEENKEDPIPEGSKIIHFTSLYIGLDITVS---GEDKKFD 480
Query: 409 IRLTVKEFKQAVSMYTLRKPGM--QISVAHVTRRNLPNFVF-PGGVRPSRPSK 458
I + +F + + +++ HV +LP+FV+ G RP +P+K
Sbjct: 481 IHVPCNDFFTLCRGFPDYNDSLIYGLNIKHVKLYDLPSFVYGEGETRPEKPNK 533
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 170/410 (41%), Positives = 253/410 (61%), Gaps = 41/410 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ G+T+PIS A PT + L + L++ +ES++ R EVL +
Sbjct: 5 RKYGVTDPISTANPTVKENALNDSLIQELKNRGSFESEQATKKRVEVLTLFQKLVQEFVY 64
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V+GPG+DIDTL V P+H TR+ DFF +
Sbjct: 65 TVSKSKNMSDGMAKDSGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFSVFPDI 123
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
+ + PE+ E+ VPDA VP++K +F G+SIDL+ ARL++ +P ++ + ++L+N DE+
Sbjct: 124 IRKRPELEEIACVPDAFVPIIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDEK 183
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+LVARI
Sbjct: 184 DLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVARI 243
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV +++V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+I
Sbjct: 244 CQLYPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVI 303
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M +++N+++ST ++++ E RG I + N + W LF+ +F AYK Y
Sbjct: 304 TPAYPSMCATHNITSSTQKVILKELSRGSSIMNDI--NTGNKTWSDLFKRHEYFHAYKFY 361
Query: 331 L-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
L + + + ++ + W G+VESRLRQL LK+E T + HP+ DFS
Sbjct: 362 LCVVAATVDTSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDFS 410
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/409 (42%), Positives = 249/409 (60%), Gaps = 43/409 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T P+SLA PT +++ L L+ +ES++ R EVL
Sbjct: 7 GVTGPVSLANPTPNEIKLNDLLISELKARGSFESEQATKKRVEVLTLFQNMVQEFVYTVS 66
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GPG+DIDTL V P+H RE DFF Q++ +
Sbjct: 67 KNKNMSDGMARDAGGKVFTFGSYRLGVYGPGSDIDTLVVVPKHVGRE-DFFTVFEQIIRK 125
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PE+ E+ VPDA VP++K +F G+SIDL+Y+RL++ +P D+ + ++L+N DE+ +R
Sbjct: 126 RPELEEITSVPDAFVPIIKIEFDGISIDLIYSRLNVPRVPLDMTLEDKNLLKNIDEKDLR 185
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+L ARICQL
Sbjct: 186 SLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNVFGFPGGVAWAMLTARICQL 245
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV + +V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+ITPA
Sbjct: 246 YPNAVGATIVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVITPA 305
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP M +++N+++ST +++M E +RG EI + E W LFE +FF YK YL I
Sbjct: 306 YPSMCATHNITSSTQKVIMKELERGAEIMSLVASGEK--TWADLFERHSFFHDYKFYLCI 363
Query: 334 DISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
++A ADD + W G +ES+LR L K+E T + HP+ DFS+
Sbjct: 364 -VAATLADDEEHHKWSGMIESKLRILVQKLEV-TDGIALAHPYVKDFSN 410
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 276/489 (56%), Gaps = 56/489 (11%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD--------- 58
+ GIT+P+S GPT++D+ +R+L L+ NLYE+ E RE++L L+
Sbjct: 12 QYGITDPVSNEGPTNNDIKASRELLNLLKSYNLYETDEGKKRREDILESLNRLLQQFVRR 71
Query: 59 --------------QVHG--------------PGADIDTLCVGPRHATREEDFFGELHQM 90
QV G P +DID LC+ PR TRE FF + +
Sbjct: 72 QAKINRGLTDQEASQVSGKLLTFGSYRLGIVAPDSDIDVLCLCPRSVTRES-FFSDFYNT 130
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
LT++ +++L PVPDA+ PV+K F +SID+L+A L + +++ D+IL+N ++
Sbjct: 131 LTKVEGISKLQPVPDAYTPVIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRS+NGCRV IL VP FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 265
CQLYPN P+ L+ +FFRV++ W+W PV LC I+E G + +VWDPR NP+D++H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMPIITPA+P MNS++NV+ +T +++ +E R EI + + ++ W+ + E F
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLEL-WEKVLEEQDVFS 369
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH--PHPG--DFSDK 381
YK++L I++ W+GW+ SR+R L ++E N+ H P PG F D
Sbjct: 370 NYKHFLVIEVYGSTEHAHGKWEGWIGSRMRFLISRLE----NLGNTHIRPIPGFFKFEDD 425
Query: 382 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHVT 438
+ S F + GV + DIR V+ FK ++ ++ + K QIS + H+
Sbjct: 426 NWDYASSAFFAFKVISGV-AENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLK 484
Query: 439 RRNLPNFVF 447
LP++V
Sbjct: 485 NNQLPDYVL 493
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 250/396 (63%), Gaps = 41/396 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S+AGPT + +L + L+ N +E+++E +R +VL L
Sbjct: 2 NYQKVYGITGPVSVAGPTAPENKLNDELIQELKKENSFETEQETANRVKVLETLQMLTEK 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVFQVSKNKNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL + +P +L +S ++L+N
Sbjct: 121 DALLRERDELDEIAPVPDAFVPIIKMKFSGISIDLICARLDIAQVPLNLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST +++++EF RG ++ + N+ W LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILEEFARGIQVTNDIFSNKG--TWADLFQKHDFFYKY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +S + +D+ W G VES+ R L LK+E
Sbjct: 359 KFYLTITVSTKGSDEEHLKWSGLVESKTRLLVLKLE 394
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 264/485 (54%), Gaps = 60/485 (12%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------------------ 59
D+ RT++L+ L+ ++YESQ E REEVLG L++
Sbjct: 26 DIKRTKELDSLLKLEDVYESQSECTRREEVLGELNEMLQDWIRTRSLSKGHPDESIRCNL 85
Query: 60 ---------VHGPGADIDTLCVGPRHATREEDFFG--------ELHQMLTEMPEVTELHP 102
VHGP ADID+L +GP+H R EDFFG + + + ++
Sbjct: 86 YTFGSYRLGVHGPAADIDSLVIGPKHIDRAEDFFGFEEDDFEGSFYDYMRKHEGTEKIVA 145
Query: 103 VPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVT 161
VPDA VP +K +F G ID+ Y L + +P DLD+ IL D+ V+SL GCRV
Sbjct: 146 VPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDDAGVKSLAGCRVA 205
Query: 162 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 221
D +L+LV +R LR +R WA RRGVYSNV GF GG+N A+LVAR+CQLYPNA SM
Sbjct: 206 DSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVARVCQLYPNASASM 265
Query: 222 LVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 277
LV FF+++ W W PV+L +++ + GL+ WD R N ++Y LM IITPAYP
Sbjct: 266 LVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPAYPAQ 325
Query: 278 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 337
NS++NVS+STL ++ EF+RG + + EA W ++ FF YK YL++ ++A
Sbjct: 326 NSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEA--KWTDVWSDVQFFAKYKTYLQLIVTA 383
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFMGLQR 395
+N +D + W+GWV SRL+ L +E + + HP F D K K ++C+ F GL
Sbjct: 384 DNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVFFGLFP 443
Query: 396 KQGVPVG---EGEQFDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRNLPNF 445
G E ++ ++ ++ F+ V Y R KPGM + + + ++++P++
Sbjct: 444 NPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKLLRKKDIPSW 503
Query: 446 VFPGG 450
P G
Sbjct: 504 ALPEG 508
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 250/413 (60%), Gaps = 41/413 (9%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N Q G+T PIS+A PT + L K L+ +ES+ R EVL L +
Sbjct: 2 NYQAYGVTPPISVANPTPKENSLNDSLIKELKSRGSFESEAATKKRVEVLHILQKLTEEF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H TR DFF
Sbjct: 62 VYTVSINKNMNEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRS-DFFEVFD 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L + PE+ E+ V DA+VP++K +F G+SIDL+ ARL + IP+DL + ++L+N D
Sbjct: 121 KILRKRPELEEIASVSDAYVPIIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+P+ P D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST +I++DEF+RG +I + N++ W L TFF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKIILDEFKRGIDIMSQISMNKS--TWSDLLARHTFFYKYK 358
Query: 329 NYLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
YL I + + +++D W G VESRLR L K+E T + HP+ F +
Sbjct: 359 FYLCIVAATQGSSEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPYVKPFEN 410
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/487 (39%), Positives = 271/487 (55%), Gaps = 66/487 (13%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT PIS+A PT+ DL ++ +LE+ L + L+ES E R EVL +++
Sbjct: 207 EQYGITAPISMADPTELDLRQSEELERVLHEYGLFESDAELTHRMEVLRKVNLLFRQWIR 266
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADIDTLCV PRH RE DFF +
Sbjct: 267 DLSIQRNMPPDVADSVGGKIFTFGSYRLGVHTRGADIDTLCVAPRHILRE-DFFTSFKDL 325
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L PEV+E P+ +A VPV+K KF G+ +D+++ARL+L +PE+ + D +L+N D +
Sbjct: 326 LKSQPEVSECRPIEEAFVPVIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDVK 385
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKR-RGVYSNVAGFLGGINWALLVAR 209
+RSLNGCRVTD+IL LVP + FR TLR ++FWAKR +GVYSNV GFLGG++WA+LVAR
Sbjct: 386 CIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVAR 445
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL----CAIEEGSLGLQ--VWDPRRNPKDK 263
CQLYP A P++LV++ WP PVLL + G +G Q +WDPR D+
Sbjct: 446 TCQLYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDR 497
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
YHLMPIITPA+P NS++NVS++T I+ G + + E + W LFEP F
Sbjct: 498 YHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLV--STEVICKGLSWPKLFEPSNF 555
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---D 380
F YK+Y+ I A DL W G VES++R L + E H +L H +P FS +
Sbjct: 556 FVKYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFE-HNTGVLLAHVNPEQFSPLEE 614
Query: 381 KSKPLYCSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVA 435
+ + +GL+ K+G+ + D+ ++ F ++ L + GM++
Sbjct: 615 HGDGVESFWVVGLEMNKEGIG---AKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAK 671
Query: 436 HVTRRNL 442
+ RR L
Sbjct: 672 YRRRREL 678
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 290/541 (53%), Gaps = 70/541 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T IS A PTD D+ T+ L+ L + + E+ R EVL L+
Sbjct: 3 GMTSAISDALPTDIDIQLTKSLDDALSREKVITTDEDLSQRLEVLSMLNNLAKEWIREVS 62
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+ GADID + + PRH TR D+F + L E
Sbjct: 63 MERNLPEITAENVGGLVCTFGSYRLGVYHKGADIDAIVIVPRHITRT-DYFATFYNKLKE 121
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
P + + V +A VPV+K G+ ID+L+ARL+L + ED D+ QD +L+N + + VR
Sbjct: 122 NPSINNVRAVEEAFVPVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPKCVR 181
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD ILRLVP ++F+ TL ++ WAKR VYSN G+LGG++WA+LVAR+CQL
Sbjct: 182 SLNGCRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARVCQL 241
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA P+ L+ +FF ++++W+WP PVLL LG VWDPR N D+ H+MPIITP
Sbjct: 242 YPNAAPATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPV 301
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP NS++NVS STL I+ DEF+ +I + E+ W +F+P FF Y+ +L I
Sbjct: 302 YPQQNSTFNVSHSTLAIIQDEFKTSLDIMGEILTGES--SWSKIFQPSKFFTKYRYFLAI 359
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC----HPHPGDFS---DKSKPLY 386
+ A ++L W+G VESRLR L +E ++C H +P F DKS+
Sbjct: 360 TVFANCDEELLEWRGLVESRLRFLPTSLEE-----IECVQRSHLNPDQFVLPYDKSQGRP 414
Query: 387 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLP 443
S +F+GL+ + G D +++F V +T+ K GM I V H+ R++L
Sbjct: 415 SSVWFVGLEISKS--NGTVVNLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRKDLR 472
Query: 444 NFV---------FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKR---KQTDDN 491
++V P V ++ + + R ++ V K + RKR +TDDN
Sbjct: 473 DYVPDELKKEKAIPNTVGSKIIARLSTEGRHSVSELVEESQK--SPTSRKRGIEDETDDN 530
Query: 492 V 492
+
Sbjct: 531 I 531
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 246/396 (62%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEA---VSREEVLGRLDQ- 59
S + G+T PIS GPT + L + L+ +E++EE V+ E+ +L Q
Sbjct: 2 SQKKIFGVTGPISTEGPTAAENALNDSLIQQLKKEGSFETEEETGKRVAVLEIFQKLTQE 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H +RE DFF
Sbjct: 62 FVYQVSKKKNMSDGMARDAGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E PE+ E+ VPDA VP++K KF+G+SIDL++A+L L +P L +S ++L+N
Sbjct: 121 DALLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNV 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVP +F+ LR ++ WAKRR VY+NV GF GG+ WA+ V
Sbjct: 181 DEKDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
RICQLYPNA ++++S+FF++ ++W+WP PVLL IE+G L ++VW+P+ +D+ H M
Sbjct: 241 VRICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N+S ST ++++ E QRG E+ + + NE + W+ LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNE--LSWEDLFKKHDFFFKY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL + +S + +D+ W G+VES+LR L K+E
Sbjct: 359 KFYLTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLE 394
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 279/504 (55%), Gaps = 73/504 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
G+T P+++ P + DL R+ +L LR +NLYE+ + RE VL L++
Sbjct: 213 FGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEV 272
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V PG+DIDTLCV PRH +R+ FF L+ L
Sbjct: 273 GMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQ 331
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 151
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 332 QDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKT 391
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR C
Sbjct: 392 ARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCC 451
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHL 266
QLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++HL
Sbjct: 452 QLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHL 511
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 322
+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 512 LPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD 570
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM---------- 368
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 571 -FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAA 629
Query: 369 LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR 426
+ P P FS + C S + L Q V D+R EF ++ + R
Sbjct: 630 MTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPER 684
Query: 427 KP---GMQISVAHVTRRNLPNFVF 447
+Q+ V H+ R LP +V
Sbjct: 685 AQLDGQIQLRVKHLRRSQLPAYVL 708
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 255/421 (60%), Gaps = 46/421 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S A PT + +L + L+ +ES++E R +VL Q
Sbjct: 2 NYQKVYGITGPVSTASPTAAENKLNDELIQELKKEGSFESEQETAKRVKVLEIFQQLAQE 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYRVSKSKNMSDGMAKDSGGKVFTFGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L + E+ E+ PVPDA+VP++K KF G+SIDL+ ARL + +P+ L +S ++L+N
Sbjct: 121 DELLRKRKELEEIAPVPDAYVPIIKTKFDGISIDLICARLDVAQVPQTLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF+RG EI + N+A W+ LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGVEITNNIFSNKA--TWEDLFKRHTFFHDY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
K YL + S + D+ W G VES++R L LK+E + HP+ F Y
Sbjct: 359 KFYLTVTASTKGNDEQHLKWSGLVESKVRLLILKLEALP-GIKSAHPYVKPFEST----Y 413
Query: 387 C 387
C
Sbjct: 414 C 414
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 279/504 (55%), Gaps = 73/504 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
G+T P+++ P + DL R+ +L LR +NLYE+ + RE VL L++
Sbjct: 224 FGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEV 283
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V PG+DIDTLCV PRH +R+ FF L+ L
Sbjct: 284 GMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQ 342
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 151
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 343 QDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKT 402
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR C
Sbjct: 403 ARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCC 462
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHL 266
QLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++HL
Sbjct: 463 QLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHL 522
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 322
+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 523 LPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD 581
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM---------- 368
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 582 -FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAA 640
Query: 369 LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR 426
+ P P FS + C S + L Q V D+R EF ++ + R
Sbjct: 641 MTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPER 695
Query: 427 KP---GMQISVAHVTRRNLPNFVF 447
+Q+ V H+ R LP +V
Sbjct: 696 AQLDGQIQLRVKHLRRSQLPAYVL 719
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 279/504 (55%), Gaps = 73/504 (14%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
G+T P+++ P + DL R+ +L LR +NLYE+ + RE VL L++
Sbjct: 194 FGVTNPVNVKLPQEGDLHRSNELISVLRALNLYETAAGNLQRERVLNELNRIVVDWVVEV 253
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V PG+DIDTLCV PRH +R+ FF L+ L
Sbjct: 254 GMEQGLDEQEARQAGGKIFTFGSYRLGVVTPGSDIDTLCVTPRHVSRDA-FFKILYAKLQ 312
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQT 151
+ V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T
Sbjct: 313 QDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDEKT 372
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR C
Sbjct: 373 ARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVARCC 432
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKYHL 266
QLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++HL
Sbjct: 433 QLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHL 492
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFT 322
+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 493 LPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKPLD 551
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM---------- 368
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 552 -FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFEAA 610
Query: 369 LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR 426
+ P P FS + C S + L Q V D+R EF ++ + R
Sbjct: 611 MTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWPER 665
Query: 427 KP---GMQISVAHVTRRNLPNFVF 447
+Q+ V H+ R LP +V
Sbjct: 666 AQLDGQIQLRVKHLRRSQLPAYVL 689
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 247/412 (59%), Gaps = 41/412 (9%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S + G+T PIS GPT + +L + L+ +ES+EE R +VL L
Sbjct: 2 SQQKVYGVTGPISKEGPTAAENKLNDELIQELKKEGTFESEEETAKRIKVLEELQALAQE 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TR+ DFF
Sbjct: 62 FVFKVSRKRNMSEGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVTRD-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L PE+ E+ PVP+A VP++K K+SG+SIDL+ ARL + +P +L +S ++L+N
Sbjct: 121 DELLRARPELDEIAPVPEAFVPIIKIKYSGISIDLICARLDIPQVPLNLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK F+ LR ++ WA+RR VY+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++V+RFF + T+W WP PVLL IE+G L ++VW+P+ D+ H M
Sbjct: 241 ARICQLYPNACSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M S++N+ ST +++++E QRG E+ + N+ W LF+ FF Y
Sbjct: 301 PVITPAYPSMCSTHNICESTKKVILNELQRGVEVTTDIFTNKK--TWGDLFQKHDFFYKY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
K YL + S + +D+ W G VES+LR L LK+E + L HP+ F
Sbjct: 359 KFYLTVMASTKGSDEQHLKWSGLVESKLRLLVLKLEVLSGINL-AHPYTKPF 409
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/412 (43%), Positives = 253/412 (61%), Gaps = 40/412 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ LG+T PIS PT+ ++ T +L + LRD YES+EEA RE VLG++D
Sbjct: 23 RHLGVTPPISENPPTEKEIACTEQLVQTLRDYGQYESEEEAQKREIVLGKIDAIFKEFVR 82
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHG +DIDTLCV P+H RE DF ++++
Sbjct: 83 SVSIKNGLPESLANDVGGKIFTFGSYRLGVHGKKSDIDTLCVAPKHVKRE-DFLEYMYEL 141
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV+E+ V DA+VP++K +FS +SIDL++ARL+L + EDLD+S DS+L+N D++
Sbjct: 142 LKARQEVSEITAVADAYVPIIKLEFSDISIDLVFARLALPTVSEDLDLSDDSLLKNLDDR 201
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNG RVTD ILRLVP ++ FR LRC++ WA +R +YSNV GF GG+ WA+L+AR+
Sbjct: 202 CIRSLNGSRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWAILIARV 261
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYP A +VS+FF++ +W WP PVLL IEEG L ++VW+P+ P+DK H MPII
Sbjct: 262 CQLYPCAAAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPII 321
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M S++NV+ ST + EF+R + + W LF+ FF YK Y
Sbjct: 322 TPAYPSMCSTHNVTVSTQTVTTQEFERAAVTTDKIMLGRE--KWTVLFQKNDFFHRYKYY 379
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
L++ S+ + + W G+VESRLRQL +K+E N+ HP+ F K+
Sbjct: 380 LQVIASSNDDEKQLMWAGFVESRLRQLVMKLEL-AENLDIAHPYIKGFDKKT 430
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 273/490 (55%), Gaps = 56/490 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSRE---EVLGRLDQ---- 59
+R GITEP++ GP++DDL + ++ L+ NL+E+ E RE E L RL Q
Sbjct: 11 KRYGITEPVTTQGPSNDDLKASEEITALLKSYNLFETDEGKQRRELVLEALNRLLQQFVR 70
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
+ P +DID LC+ P+ TRE FF + +
Sbjct: 71 RQAKKNQGISESEANTISGKLLTFGSYRLGIVAPDSDIDVLCLCPKCVTRES-FFSDFYI 129
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
LT++ +++L VPDA+ PV+K + +SID+L+A L + ++++ D+IL+N ++
Sbjct: 130 SLTKVEAISKLQAVPDAYTPVIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMND 189
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
TVRS+NGCRV IL VP NFR TLR ++ WA RR +YS V G+LGG+ WA+L AR
Sbjct: 190 STVRSINGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTAR 249
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKY 264
+CQLYPN VP+ L+ +FFRVY+ W W PV LC I++ G + +VWDP+ NP D+
Sbjct: 250 VCQLYPNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQ 309
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFT 322
HLMPIITPA+P MNS++NV+ +T R+M DE +R +I ++ KN+ +
Sbjct: 310 HLMPIITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEED--- 366
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DFSD 380
F +YK++L I++ + W+GW+ SR+R L K+E Q P PG F D
Sbjct: 367 IFSSYKHFLIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNT--QIRPLPGFFKFED 424
Query: 381 KSKPLYCSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLR---KPGMQISVAH 436
S F L+ G+G + DIR +++ FK ++ +T K +++++ H
Sbjct: 425 SEWEYASSAFFALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRH 484
Query: 437 VTRRNLPNFV 446
V LP++V
Sbjct: 485 VKSSQLPDYV 494
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 246/409 (60%), Gaps = 41/409 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GITEPIS A PT +++ +L + L+ +ES+ E+ R++VL + Q
Sbjct: 3 EQYGITEPISTAPPTPEEIALNGELIEELKRQGSFESEAESNKRKKVLLIMQQLAQEYVR 62
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VHGPG+DIDTL V P+H TRE DFF ++
Sbjct: 63 QVSLKKNFSDGMARDAGGKIFTFGSYSLGVHGPGSDIDTLIVVPKHVTRE-DFFEVFERL 121
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E PE+ E+ VPDA VP++K KF G+SIDL+ ARL + +P DL + D++L+N D++
Sbjct: 122 LRERPELEEISAVPDAFVPIIKVKFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDDK 181
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+R+LNG RVTD ILRLVP F+ LR ++ WA+ R VY N+ GF GG+ W +LVAR+
Sbjct: 182 DLRALNGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVARV 241
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV ++++SRFF V +WRWP PVLL IE+G L +VW+PR +DK H MPII
Sbjct: 242 CQLYPNAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPII 301
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M +++N++ ST ++++ E +RG +I + + W LFE FF YK Y
Sbjct: 302 TPAYPSMCATHNITASTQKVILRELERGGQILNEIMLGQK--PWSALFEKHHFFSDYKYY 359
Query: 331 LRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
L I +++ A+ W G+VES+LR L K+E L HP+ F
Sbjct: 360 LSIVAASKGTAEQQLKWSGFVESKLRHLVQKLELLDSIEL-AHPYVKTF 407
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 230/364 (63%), Gaps = 40/364 (10%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GS Q+ GIT PISLA P D D T+KL + L+ ++E ++E R +LG+L+
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILILGKLNNL 68
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH GADID LCV PRH R DFF
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFF 127
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N D + +RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFF 365
Query: 325 EAYK 328
+ YK
Sbjct: 366 QKYK 369
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 174/382 (45%), Positives = 234/382 (61%), Gaps = 45/382 (11%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------------------ 59
DL + LE L N++E+ EE REEVLG +++
Sbjct: 2 DLKLSADLEARLHLENVFEAPEECTRREEVLGEINEALQQWCRARSASKGIEEDLDPRCN 61
Query: 60 ----------VHGPGADIDTLCVGPRHATREEDFFGE--------LHQMLTEMPEVTELH 101
VHGP ADIDTLC+GPRH TR EDFFG + + P ++
Sbjct: 62 LYTFGSYRLGVHGPAADIDTLCIGPRHLTRAEDFFGSEWTGYEGSFYLEMKNHPGTDQVV 121
Query: 102 PVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRV 160
VPDA VP +K F G ID+ Y + +V +PEDLD+ Q +ILQN D+ +V+SLNGCRV
Sbjct: 122 AVPDAVVPELKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLNGCRV 181
Query: 161 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
DQ+LRLVP FR LR +R WAK RGVYSNV G+ GG+N ALLVAR+CQLYPNA PS
Sbjct: 182 ADQLLRLVPNHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPNAAPS 241
Query: 221 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 280
MLV FF+++ W+W PV+L I + GL+VWD R N +++ LM IITPAYP NS+
Sbjct: 242 MLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 281 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 340
+NV+ STL ++ +EF+RG E+C + ++ W++L+EP FF +K+YL++ I+A +
Sbjct: 302 FNVTHSTLHVLKNEFKRGREVCAEVLMSKK--RWESLWEPLPFFTMHKHYLQVTIAAVSE 359
Query: 341 DDLRNWKGWVESRLRQLTLKIE 362
DD + W+GWV SRLR L +E
Sbjct: 360 DDFKKWEGWVHSRLRMLVQGVE 381
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 238/390 (61%), Gaps = 40/390 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS AGPT + L + L+ +ES+E+ R EVL L
Sbjct: 8 GVTGPISTAGPTAAENQLNDALIQELKKEKSFESEEDTKKRVEVLRILQNLAQEFVYQVS 67
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGPG+DIDTL V P+H TRE DFF Q+L
Sbjct: 68 KKRNMSDGMAKDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDQILRT 126
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
E+ E+ PVPDA VP++K KFSG+SIDL+ ARL + +P +L ++ ++L+N DE+ +R
Sbjct: 127 RSELEEIAPVPDAFVPIIKIKFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDEKDLR 186
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
+LNG RVTD+IL+LVPK +F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQL
Sbjct: 187 ALNGTRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQL 246
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA +++++RFF + T+W WP PVLL IE+G L ++VW+PR +D+ H MP+ITPA
Sbjct: 247 YPNACSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITPA 306
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP M +++N+S ST ++++ E +RG +I + N+ W LF+ FF YK YL +
Sbjct: 307 YPSMCATHNISESTKKVILAELERGAQISSEIFSNKK--TWSDLFQKHDFFYKYKFYLTV 364
Query: 334 DISAENADDLR-NWKGWVESRLRQLTLKIE 362
S + + W G VES+LR L K+E
Sbjct: 365 MASTSGSSEQHLKWSGLVESKLRLLVQKLE 394
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 255/421 (60%), Gaps = 46/421 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S AGPT + L + L+ N +E+++E +R EVL L +
Sbjct: 2 NYQKVYGITGPVSTAGPTAAENKLNDGLIQELKRNNSFETEKETANRVEVLKLLQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H +RE DFF E
Sbjct: 62 FVFNVSKKKNMSDGMAKDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVSRE-DFFTEF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VPV+K K G+SIDLL A+L + +PE L +S +++L+N
Sbjct: 121 DSLLRERSELDEIAPVPDAFVPVIKIKLRGISIDLLCAKLDIAQVPESLVLSDNNLLRNV 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+ R VY+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST +++++EF RG +I + ++ W LF FF Y
Sbjct: 301 PVITPAYPSMCATHNITDSTKKVILEEFSRGIQITNDIFSSKK--SWSDLFNKHEFFYKY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
K YL I S +D+ W G VES++R L LK+E + + HP F + +Y
Sbjct: 359 KFYLTITASTRASDEEHLKWSGLVESKVRLLVLKLEALS-GIKIAHPFIKPF----ETIY 413
Query: 387 C 387
C
Sbjct: 414 C 414
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/396 (42%), Positives = 251/396 (63%), Gaps = 41/396 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSRE---EVLGRLDQ- 59
N Q++ GIT P+S A PT + +L + L+ +ES++E +R E+L +L Q
Sbjct: 2 NYQKVYGITGPVSTAAPTAAENKLNDELIQELKKEGSFESEQETNNRVKVLEILQKLTQD 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P++ TRE DFF
Sbjct: 62 FVYKVYKNKNMSDGMAKDAGGKVFTFGSYRLGVHGPGSDIDTLVVVPKYVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
Q L E E+ E+ PVPDA+VP++K KFSG+SIDL+ A+L + +P +L ++ ++L+N
Sbjct: 121 DQSLRERKELDEIAPVPDAYVPIIKIKFSGISIDLICAKLDIAQVPINLQLNDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF+RG +I + N+ + W+ LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGMKITNDIFSNK--LTWNDLFKKHTFFYDY 358
Query: 328 KNYLRIDISAENAD-DLRNWKGWVESRLRQLTLKIE 362
K YL I + + D D W G VES++R L LK+E
Sbjct: 359 KFYLTITTATKGTDEDHLKWSGLVESKVRLLILKLE 394
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/355 (49%), Positives = 225/355 (63%), Gaps = 39/355 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLLPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPA
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPA 319
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
YP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK
Sbjct: 320 YPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYK 372
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/407 (41%), Positives = 244/407 (59%), Gaps = 41/407 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A PT + L L+ +ES+ R EVL
Sbjct: 6 GVTGPISTADPTAKEFSLNESLIHELKGRGSFESESATKKRAEVLSLFQTLVQEFVYEVS 65
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GP +DID L V PRH TRE DFF Q++ +
Sbjct: 66 KSKNMSDGMSRDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDQIIRK 124
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PE+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +R
Sbjct: 125 RPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLR 184
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQL
Sbjct: 185 SLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQL 244
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV S++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 245 YPNAVSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITPA 304
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-R 332
YP M +++N+++ST ++++ E RG + +++ E + W LFE FF Y+ YL
Sbjct: 305 YPSMCATHNITSSTQKVIIQELLRGASVMKSI--FEGEKTWSDLFERHNFFHRYRFYLCV 362
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
+ + ++A++ W G+VES+LRQL LK+E T + HP+ DFS
Sbjct: 363 VAATVDSAEEHHKWHGFVESKLRQLVLKLES-TEGIEIAHPYVKDFS 408
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 243/396 (61%), Gaps = 41/396 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S AGPT + +L + L+ +ES++E +R +VL L +
Sbjct: 2 NYQKVYGITGPVSTAGPTAAENKLNDELIQELKKEGSFESEQETANRIKVLKILQELAQE 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H RE DFF L
Sbjct: 62 FVYRVSKKKNMSDGMARDAGGKIFTFGSYRLGVHGPGSDIDTLVVVPKHVMRE-DFFTVL 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L PE+ E+ PVPDA VP++K KFSG+SIDL+ A+L L IP+ L +S ++L+N
Sbjct: 121 DEILRSRPELEEIAPVPDAFVPIIKIKFSGISIDLICAKLDLAQIPQSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNATSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST R+++ E + G I + N+ W LF FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKRVILQELENGISITNDIFSNKK--TWSDLFTKHNFFYKY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL + S D+ W G VES++R L LK+E
Sbjct: 359 KFYLTVMASTRGTDEENLKWSGMVESKVRLLVLKLE 394
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 282/497 (56%), Gaps = 59/497 (11%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD--- 58
S + G+T P+S+ T++D+ + +++ YL++ +E +E +RE VLG+L+
Sbjct: 3 ASERSYKYGVTGPLSMKESTEEDIRLSEEMDTYLQERGFFEDCKEGQTRERVLGKLNFMV 62
Query: 59 --------------------------------QVHGPGADIDTLCVGPRHATREEDFFGE 86
VHG G DID LC+ PRH TR DFF
Sbjct: 63 KEFVARMAKNKGNGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRS-DFFTY 121
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
++ L E P + + + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++
Sbjct: 122 FYEELKEDPNIEGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKS 181
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE+ + SLNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L
Sbjct: 182 MDEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLC 241
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VAR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH
Sbjct: 242 VARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHR 301
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MP+ITPAYP M +++NVS ST ++ EF R HEI EKN D+ +FE FF
Sbjct: 302 MPVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNPEKN----DFRRIFELSDFFSR 357
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS------- 379
YK ++ + + + + W+G+VES++R L K E ++L P P F
Sbjct: 358 YKLFVEVLAMSTSEEGFAKWEGYVESKIRILASKFE-AVDDILYAIPFPKAFRVGEESIR 416
Query: 380 ----DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 434
S+ C+ +F+ + +PV +G++ + VKEF + + Y ++ M+I V
Sbjct: 417 KIRPGASEVKKCTAFFIAIDI---IPV-KGKKVVVEQQVKEFMEFIKEYEGKESSMRIEV 472
Query: 435 AHVTRRNLPNF--VFPG 449
+ ++++ F VF G
Sbjct: 473 NSLKKKDIQGFLRVFYG 489
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/413 (41%), Positives = 247/413 (59%), Gaps = 41/413 (9%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
+ Q G+T PIS+A PT + L K L+ +ES+ R EVL L +
Sbjct: 2 SNQTFGVTPPISVANPTAKENELNDLLIKELKQRGSFESETATKKRVEVLNILQKMTEDF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H TR DFF +
Sbjct: 62 VFKVSIKKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLIVVPKHVTRN-DFFETFY 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + + DL + ++L+N D
Sbjct: 121 ELLKTRDELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVSRDLTLDDKNLLKNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +R+LNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV ++++ +FF +Y+QW WP PVLL IE+G L ++VW+P+ D+ H MP
Sbjct: 241 RICQLYPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST ++++ EFQRG EI + N W LFE FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIEIMNGI--NSGSKTWSDLFERHDFFFRYK 358
Query: 329 NYLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
YL I + + N+++ + G VES+LR L K+E + HP+ F D
Sbjct: 359 FYLCIVAATKSNSEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/389 (42%), Positives = 237/389 (60%), Gaps = 41/389 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV--------- 60
GITEP+SL P + D+ T +L+K L LY+S+E A RE VL LD++
Sbjct: 12 GITEPLSLEKPKEHDIKLTDELQKTLVQYGLYDSKERAKQREYVLKSLDKMTKKFVQIVY 71
Query: 61 ---------------------------HGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
+ ADIDTLCV P++ +R+ DFF + +L
Sbjct: 72 ERQGFSKQEAIQAGGKVLTYGSYRLGANAADADIDTLCVFPKYVSRK-DFFTIMLSLLRS 130
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
++ ++ PV D++VPV+KFK++ + ID + ARL++ +PED+D+S IL DE ++R
Sbjct: 131 NEQIKDITPVTDSYVPVIKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSIR 190
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RV D ILRLVP I+ FRT LRC++ WA R+ +YSN+ GFLGG+ WA+LVAR+CQL
Sbjct: 191 SLNGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQL 250
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIIT 271
YP+A S +V FF++ W WP+PV+L A+E+G + W+P+ NP D+ H MPIIT
Sbjct: 251 YPHASASTVVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIIT 310
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
P+YP M S++NV ST RI+M E ++ EI + + A W LF+ FFE Y YL
Sbjct: 311 PSYPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSA--TWARLFQSHNFFEIYMQYL 368
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLK 360
+I + A+N + W G VE+RLRQL L+
Sbjct: 369 QITVVADNYNLQLKWAGLVEARLRQLLLE 397
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/481 (40%), Positives = 272/481 (56%), Gaps = 49/481 (10%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GS+ Q+ G+T IS AGP DL T++LE+ L ++ES++E R VL +L++
Sbjct: 8 GSNPPQKSFGVTSAISHAGPKPRDLELTKRLEEALIPYGVFESEDELQQRMIVLAKLNEL 67
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH GAD TL V P H R DFF
Sbjct: 68 VKEWIVEVSIKKKMPENVAKTVGGKIFTFGSFILGVHTKGAD--TLLVAPHHIDRA-DFF 124
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
+ +L P+V EL V +A VPV+K F + +DLL+ARL+ IP++LD+ +++L
Sbjct: 125 SSFYDLLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLL 184
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N D + VRSLNGCRVTD+ILR VP I++FR TL ++ WAK+ GVYSNV GFLGG++WA
Sbjct: 185 KNLDPKCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGFLGGVSWA 244
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPK 261
+LVAR CQLYPNA S L+ +FF V+++W WPNPVLL I E LG + WDPR NP
Sbjct: 245 MLVARTCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPG 304
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+YHLMPIITPAYP NS++NVS ST +IM DEF G + E + +A +WD LF P
Sbjct: 305 DRYHLMPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKA--NWDRLFTPP 362
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP---GDF 378
FF Y++Y+ + S+ ++ W G VES++R L +E + Y L H +P G
Sbjct: 363 NFFHKYRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPL 421
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 438
+ + +F+GL ++ V ++I++ + + K GM HV
Sbjct: 422 DSEGEKHVTRWFIGLMFEKLENVNINLTYEIQMFKNKVHAQAVKIMMFKEGMVTEAKHVR 481
Query: 439 R 439
R
Sbjct: 482 R 482
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/412 (42%), Positives = 253/412 (61%), Gaps = 43/412 (10%)
Query: 5 NGQRLGITEPISLAGPT------DDDLMR-------------TRK-----------LEKY 34
N G+T PIS A PT +D L+R TRK EK+
Sbjct: 2 NHHNYGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAEKF 61
Query: 35 LRDVNLYESQEEAVSREE-----VLG--RLDQVHGPGADIDTLCVGPRHATREEDFFGEL 87
+ +V+L ++ + ++R+ G RL V+GPG+DID L V P+H TR DFF
Sbjct: 62 VYEVSLQKNMSDGMARDAGGKIFTFGSYRLG-VYGPGSDIDALVVVPKHVTRN-DFFEVF 119
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L E E+ E+ VPDA+VP++K +G+SIDL++ARL + +P+DL + ++L+N
Sbjct: 120 EKILRERKELEEIAAVPDAYVPIIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNI 179
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LV
Sbjct: 180 DEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLV 239
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+PR P D+ H M
Sbjct: 240 ARICQLYPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRM 299
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N+++ST +I+M EF+RG +I + N W L TFF Y
Sbjct: 300 PVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNK--TWANLLARHTFFHNY 357
Query: 328 KNYLRIDISAENA-DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
K YL I + + + ++ W G VESRLR L K+E T + HP+ F
Sbjct: 358 KFYLCIVAATKGSYEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPYVKTF 408
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 280/496 (56%), Gaps = 59/496 (11%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---- 58
S + G+T P+S+ T++D+ + +++ YL++ +E EE +RE VLG+L+
Sbjct: 4 SERNYKHGVTGPLSMKESTEEDVKLSEEMDMYLQERGFFEDDEEGQTRERVLGKLNFMVK 63
Query: 59 -------------------------------QVHGPGADIDTLCVGPRHATREEDFFGEL 87
VHG G DID LC+ PRH TR DFF
Sbjct: 64 EFVARMAKNKGNGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTYF 122
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++ L P + + + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++
Sbjct: 123 YEELKGDPNIKGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSM 182
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ + SLNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L V
Sbjct: 183 DEKCILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCV 242
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH M
Sbjct: 243 ARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRM 302
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++NVS ST ++ EF R HEI +EKN D+ +FE FF Y
Sbjct: 303 PVITPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNLEKN----DFRRIFELSDFFGRY 358
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS------DK 381
K ++ + + + W+G+VESR+R L K E ++L P P F K
Sbjct: 359 KLFVEVLAMSTLEEGFTKWEGYVESRIRILASKFE-AVDDILYAIPFPKAFRVLEESIGK 417
Query: 382 SKP------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVA 435
KP ++F+ + +PV +G++ + VKEF + V Y ++ M I +
Sbjct: 418 IKPGAEEVKRCTAFFIAIDV---IPV-KGKKVVVEQQVKEFMEFVKEYEGKESNMWIEIN 473
Query: 436 HVTRRNLPNF--VFPG 449
+ R+++ F VF G
Sbjct: 474 SLKRKDVQGFLRVFYG 489
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 258/437 (59%), Gaps = 31/437 (7%)
Query: 2 GSSNGQRL--GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ 59
+ G +L GIT P+SL GPT+ D+ T++L+K L LY+S+E A RE VL LD+
Sbjct: 3 ATQQGTKLYPGITRPLSLEGPTEYDIHLTKELQKTLMLYGLYDSEETAKLREHVLKSLDE 62
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLT------------EMPEVTELHPVPDAH 107
+ V R +E ++ T ++ ++ PV DA
Sbjct: 63 MTKKFVQF----VYERQGFSKEQAVKAGGKIFTYGSYRLGVNAKASNEQIKDITPVTDAF 118
Query: 108 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 167
VPV+KFK+SG+ ID + ARL+L I ED+D+ IL+ D ++RS+NG RV D IL L
Sbjct: 119 VPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEILRGLDAHSIRSINGTRVADDILSL 178
Query: 168 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 227
VP + FR TLRC++ WA R+ VYSNV GFLGG+ WA+LVAR+CQLYP+A S L+S+FF
Sbjct: 179 VPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAWAILVARVCQLYPHASASTLISKFF 238
Query: 228 RVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 285
+ T W WP+PV+L A+E+G + W+P+ NP D+ H MP+ITP+YP M +++NV+
Sbjct: 239 HILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITPSYPSMCTTHNVTQ 298
Query: 286 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 345
ST RI+ E ++ +I + + A W LFE +FF+ Y+ YL+I + A+N +
Sbjct: 299 STQRIITGEIKQAAKIVDKIMAGSA--KWPQLFEAHSFFKMYRQYLQITVVADNYELQLK 356
Query: 346 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 405
W G VE+RLRQL +K+E ++++Q HP FS+ C Y + V V +GE
Sbjct: 357 WTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGFSET-----CLYRTSTDK---VTVSQGE 407
Query: 406 QFDIRLTVKEFKQAVSM 422
++D T+ + K V +
Sbjct: 408 KYDNNRTIGKMKMEVDV 424
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 282/501 (56%), Gaps = 59/501 (11%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---- 58
S + G+T P+S T++++ + +++KYL++ +E +E +RE VLG+L+
Sbjct: 4 SEKSYKYGVTGPLSTRESTEEEIRLSGEMDKYLQERGFFEDDKEGQTRERVLGKLNFMVR 63
Query: 59 -------------------------------QVHGPGADIDTLCVGPRHATREEDFFGEL 87
VH GADID LC+ PRH +R DFF
Sbjct: 64 EFVARMARNKGSGDGERPCGGKIFTFGSYRLGVHSKGADIDALCIVPRHVSRS-DFFTHF 122
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++ L P + E+ + DA VP++K KF G+ IDL++ARLS+ V+ + +++ D++L++
Sbjct: 123 YEELKGDPNIEEVTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKSM 182
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ + SLNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L V
Sbjct: 183 DEKCILSLNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCV 242
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH M
Sbjct: 243 ARVCQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRM 302
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++NVS ST ++ EF R H+I E+N D+ +FE FF Y
Sbjct: 303 PVITPAYPSMCATHNVSNSTQHVITMEFTRAHKILSDPERN----DFRRIFELSDFFSRY 358
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-- 385
+ ++ + + +D W+G++ES++R L K E ++L P P F + +
Sbjct: 359 RLFVEVLAMSSCEEDFPKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEESIEK 417
Query: 386 ----------YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVA 435
++F+ + +PV +G++ + VKEF + V Y R GM+I V
Sbjct: 418 IGPRMEGMKKCTAFFIAI---DVIPV-KGKKVIVEQQVKEFIEFVREYEGRASGMRIEVN 473
Query: 436 HVTRRNLPNF--VFPGGVRPS 454
+ R+++ F VF G PS
Sbjct: 474 SLKRKDVQGFLRVFYGKESPS 494
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 247/408 (60%), Gaps = 41/408 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T P+S A PT ++ L + L+ +ES+ R EVL
Sbjct: 6 GVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVS 65
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GP +DID L V PRH TRE DFF +++ +
Sbjct: 66 ISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKIIRQ 124
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PE+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +R
Sbjct: 125 RPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLR 184
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQL
Sbjct: 185 SLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQL 244
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV +++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 245 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPA 304
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-R 332
YP M +++N+++ST ++++ E RG I +++ + E W LF FF Y+ YL
Sbjct: 305 YPSMCATHNITSSTQKVILQELTRGSSIMKSILEGEK--SWSDLFARHDFFHRYRFYLCV 362
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
+ ++E+A++ W G+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 363 VAATSESAEEHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDFSN 409
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 242/411 (58%), Gaps = 41/411 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
Q G+T PIS A PT + L K LR +E++ R EVL L +
Sbjct: 4 QTYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVY 63
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V+GPG+DIDTL V P+H R DFF +
Sbjct: 64 RVSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESL 122
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E PE+ E+ VPDA VP++K +F G+SIDL+ A+L + +P DL + ++L+N DE+
Sbjct: 123 LRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEK 182
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+N+ GF GG+ WA+L ARI
Sbjct: 183 DLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARI 242
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVI 302
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M +++N+++ST I++ EF+RG EI + + +W LF FF YK Y
Sbjct: 303 TPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKFY 360
Query: 331 LRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
L + S + +A++ W G VES+LR L K+E T + HP+ F D
Sbjct: 361 LCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 294/560 (52%), Gaps = 106/560 (18%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS A PT D+L L L+ N +ES E R++VL L +V
Sbjct: 1 MSTPPVRQWGVTPPISTALPTSDELAANDDLISELKTQNNFESPAETERRKQVLQLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 ALEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L +M + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +
Sbjct: 120 SDFPPVLEKMAPPGAIEKMTPVPDAFVPIIKMELSGISIDLIFARLIVSSVPLNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--MTWNDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 378
+FF + YK YL I S++ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTQDYKYYLSITASSKTKEAESVWSGLVESKIRHLVGALDRKN-TIAVAHPFPKGFER 416
Query: 379 -----------------------------SDKSKPL--YCSYFMGLQRKQGVPVGEGEQF 407
+D++ + + G++ + PVG+ E
Sbjct: 417 VHLVSSEEEAEAVKNGSTKYQDKGTKTETTDETNDIAHQAAAQNGVENAEVEPVGQKENG 476
Query: 408 DIR----------LTVKE-----------------FKQAVSMYTLRKPGMQ-ISVAHVTR 439
D R L +K FK + + +PG+ +++ HV
Sbjct: 477 DSRTIYTTTYYIGLELKPLEPGASRSLDISTDAQIFKSTCTSWAGYQPGINDLAITHVRN 536
Query: 440 RNLPNFVF-PGGVRPSRPSK 458
+LP+ VF PG RP+RP K
Sbjct: 537 FDLPDDVFQPGETRPTRPKK 556
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 242/411 (58%), Gaps = 41/411 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
Q G+T PIS A PT + L K LR +E++ R EVL L +
Sbjct: 4 QTYGVTPPISTAEPTSKEKSLNDSLIKELRKRGSFENEAATKKRVEVLNTLQKITEEFVY 63
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V+GPG+DIDTL V P+H R DFF +
Sbjct: 64 RVSLNKNMSEGMARDAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVNRT-DFFTVFESL 122
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L E PE+ E+ VPDA VP++K +F G+SIDL+ A+L + +P DL + ++L+N DE+
Sbjct: 123 LRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDEK 182
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+N+ GF GG+ WA+L ARI
Sbjct: 183 DLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTARI 242
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+I
Sbjct: 243 CQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVI 302
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP M +++N+++ST I++ EF+RG EI + + +W LF FF YK Y
Sbjct: 303 TPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKFY 360
Query: 331 LRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
L + S + +A++ W G VES+LR L K+E T + HP+ F D
Sbjct: 361 LCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 280/537 (52%), Gaps = 83/537 (15%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS PT D+L L L+ N +ES E R++VL + +V
Sbjct: 1 MAAPPVRQWGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIID-DFF 119
Query: 85 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L +M + ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ +
Sbjct: 120 SDFPPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--LRWEDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 378
TFF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 TFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKA-TIAIAHPFPKGFER 416
Query: 379 --------------------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV-KEFK 417
DK + M Q E D+ K
Sbjct: 417 VHRVSSEEEIEAVKTGSTKYQDKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVD 476
Query: 418 QAVSMYTLR----------KPGMQ-----ISVAHVTRRNLPNFVF-PGGVRPSRPSK 458
MYT +PG Q +++ HV +LP VF PG RP+RP K
Sbjct: 477 DTHVMYTTTYYIGLELKPLEPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKK 533
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 271/484 (55%), Gaps = 53/484 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S G G++ I+L GPT +D+ +L LR +NL+E+++ RE +L L++
Sbjct: 9 SEGVMYGVSTSITLDGPTPEDIEANEQLLTLLRSLNLFETEKGLRKRELILASLNRLLHN 68
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
V GP +DID LC+ P+ TR DFF
Sbjct: 69 FIHSVCIMQGLDEDDANDVSARLLTFGSYRLGVIGPDSDIDALCLCPQRITRN-DFFTVF 127
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+ +L P V+++H V DA+ P++K + + ID+L+A L + I +L I D IL+N
Sbjct: 128 YDILANHPNVSKIHAVADAYTPLIKLVYDDIDIDILFAILPIPTISPNLSILDDDILRNL 187
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D+ T RS+NGCRV +L VP NFR TLR ++ WA++RG+YSN+ G+LGG+ WA+L
Sbjct: 188 DDITARSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVAWAILT 247
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKD 262
AR+CQLYPN +P+ ++ +FF+VY W W PV++ I++ G + +VWDP+ NP+D
Sbjct: 248 ARVCQLYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQD 307
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+ HLMPIITPA+P MNS++NV+ +T R+M++EF+R HE+ K ++ + W+ L EP
Sbjct: 308 RLHLMPIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELL----KTQSQMTWNDLLEPAN 363
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
F +K++L I + A + W GW+ESR+R L K+E + L+ PH D
Sbjct: 364 IFNEFKHFLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTELRPWPHSITMEDPD 423
Query: 383 KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY---TLRKPGMQISVAHVTR 439
F+GL + E QFDIR +KEFK + + T + + + + ++ +
Sbjct: 424 WTNSKWIFIGLSYNK----TEESQFDIRTPIKEFKNLIFSWQELTSYESKVDVRIEYMKK 479
Query: 440 RNLP 443
LP
Sbjct: 480 SQLP 483
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 248/418 (59%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M +++ ++ G+T PIS A PT ++ L L+ N +ES E R++ L + +V
Sbjct: 1 MAAASVRQWGVTPPISTALPTPSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L +M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPLLEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+YHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQ--LTWNDLFTRH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I S+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKS-SIEVAHPFPKGF 414
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 388 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 446
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP V
Sbjct: 485 TYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPEDV 543
Query: 447 FPGG-VRPSRPSKGTWDSRRALERKVSSH 474
F G VRPSRP K T +K S H
Sbjct: 544 FQSGEVRPSRPKKKTLKKTEPTAQKRSIH 572
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 228/364 (62%), Gaps = 40/364 (10%)
Query: 2 GSSNGQR-LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
GS Q+ GIT PISLA P D D T+KL + L+ ++E ++E R LG+L+
Sbjct: 9 GSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPYGVFEEEDELQHRILSLGKLNNL 68
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH GADID LCV PRH R D F
Sbjct: 69 VKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DLF 127
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L
Sbjct: 128 SSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 187
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+N D + +RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA
Sbjct: 188 KNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWA 247
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 248 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 307
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 308 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFF 365
Query: 325 EAYK 328
+ YK
Sbjct: 366 QKYK 369
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 277/516 (53%), Gaps = 64/516 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---------- 58
GI++PIS+ P DL+ + L + L+ N +E EE R +VL +L+
Sbjct: 10 FGISQPISMDFPNKKDLLLNKSLTETLKSFNCFEPSEETSQRVKVLNKLNFLVKKWIHLL 69
Query: 59 -----------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP 95
VH G+DIDTL + PRH TR DF E
Sbjct: 70 TITRIPMDVDAGGKLIAFGSYRLGVHSSGSDIDTLVLAPRHVTRL-DFILENFT------ 122
Query: 96 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 155
A VP+M FK+SG+ IDLL+ARL + +P+++D+S D+IL+N D ++VRSL
Sbjct: 123 ----------AFVPIMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNILKNLDPESVRSL 172
Query: 156 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 215
NGCRV +Q+L+ VP F TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYP
Sbjct: 173 NGCRVAEQLLKQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAWAILVARTCQLYP 232
Query: 216 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE----GSLGLQVWDPRRNPKDKYHLMPIIT 271
NA PS L+ + F V++ W WP+PV+L +E +L VWDPRRN D+ HLMPIIT
Sbjct: 233 NAAPSKLIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMPIIT 292
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
P++P NS++NVS STL+++ +E + +ICE ++K +A W L E FF Y++ +
Sbjct: 293 PSFPEQNSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKA--TWKDLLEETNFFCKYRHLI 350
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 391
+ I+AE + ++ G+ ESR+RQL +ER++ + + F P +F+
Sbjct: 351 AVSINAEKEKEDTDFAGFFESRIRQLVQLLERNSQVQI-AQVNTRKFKAPFSPGKSQWFI 409
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGG 450
GL+ Q + D+ +K FK+ + K G +QI A+V + L ++
Sbjct: 410 GLEFIQA-----AKNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKKSKLITYISAAE 464
Query: 451 VRPSR-PSKGTWDSRRALERKVSSHTKPGADDGRKR 485
++ + K T + RK + T+ G D + R
Sbjct: 465 LKRGKFMKKDTSPEKENANRKRPTTTQSGDDVKKPR 500
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 253/421 (60%), Gaps = 50/421 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T+PIS A PT + L LR +ES++ R EVL + +
Sbjct: 7 GVTDPISTANPTPKENSLNDALIGELRSRGSFESEQATKKRVEVLTQFQKMVQEFVFTVS 66
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GPG+D+DTL V P+H +RE DFF +++ +
Sbjct: 67 KKKNMSDGMAKDAGGKVFTFGSYRLGVYGPGSDLDTLVVVPQHVSRE-DFFTVFAEIIRK 125
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PE+ E+ PVPDA VP++K ++ GV +DL++A L++ IP D+ + ++L+N DE+ +R
Sbjct: 126 RPELEEIVPVPDAFVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDERDLR 185
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RVTD+IL+LVPK F+ LRC++ WA+++ VY NV GF GG+ WA+LVARICQL
Sbjct: 186 SLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVARICQL 245
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 246 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITPA 305
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP M +++N+++ST ++++ E ++G E+ + N W LF+ FF YK YL +
Sbjct: 306 YPSMCATHNITSSTQKVILSELEKGAEVVRQI--NLGKKSWSDLFDRHDFFHHYKFYLCV 363
Query: 334 DISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 391
++A A D + W G +ES+LR L LK+E T + HP+ DFSD SY +
Sbjct: 364 -VAATVASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSD-------SYVL 414
Query: 392 G 392
G
Sbjct: 415 G 415
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 248/420 (59%), Gaps = 44/420 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N Q G+T PISL PT D L K L+ YES+ + R EVL L +
Sbjct: 7 NNQTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDF 66
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GP +DID L V PRH TRE DFF
Sbjct: 67 VYEVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFE 125
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 126 KILRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 185
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVA
Sbjct: 186 EKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVA 245
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 246 RICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 305
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N++ ST +I+M+EF RG EI + + W L E +FF YK
Sbjct: 306 VITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYK 363
Query: 329 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 387
YL + + NA++ + G VES+LR L K+E+ + HP+ F + YC
Sbjct: 364 FYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 419
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 277/524 (52%), Gaps = 79/524 (15%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LGIT+PIS++ PT+ + T + + L ++ES E++ RE L R+
Sbjct: 10 LGITDPISVSPPTEAEEAATVAMMEELHRQGVFESAEDSKRRELALDRISALTKKFVQKV 69
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH P +DIDTLCV P+H +RE DFF ML
Sbjct: 70 TIARGLSEVTARNAGGKVYTFGSYRLGVHTPESDIDTLCVVPKHVSRE-DFFDVFEPMLR 128
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E P+VTE+ +P+A+VP++K K G+ ID+L ARL+L IPEDL + +IL+N D++ V
Sbjct: 129 ESPDVTEVAGIPEAYVPIIKIKMFGIPIDILMARLALSSIPEDLSLQDSNILRNLDDRCV 188
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RVTD++LRLVP + FR LRC++ WA+R+ +YSNV GF GG+ WA+LVAR+CQ
Sbjct: 189 RSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGVAWAMLVARVCQ 248
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA +V RFF + QW WP PV+L +++ +G + W+P+ P D+ H MP+ITP
Sbjct: 249 LYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPVITP 308
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
YP M +++NVS ST I+ +E +RG ++ ++ + W LFE FF Y+ +L+
Sbjct: 309 VYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSS--KWSELFEKHDFFHKYRYFLQ 366
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD------------ 380
I S +A+ W VE+++RQL K+E ++ HP F
Sbjct: 367 IIASTASAEAQLMWAPNVEAKIRQLVSKLEL-VESLTLAHPFTKGFEQVFYCMNDDEIRS 425
Query: 381 -----------------------KSKPLYCSYFMGLQRKQGVPVGE--GEQFDIRLTVKE 415
SK ++++GL + PVG + DI E
Sbjct: 426 VAQGEVPDVIARRRPQDIEGVESGSKVYSTTFYIGLA-IEPRPVGAIGTRRLDISYPTTE 484
Query: 416 FKQAVSMYT-LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 458
F + M+ + M + V H+ LP++VF G R R ++
Sbjct: 485 FTKVAKMWERFDEATMGLVVRHIKSSALPDYVFEPGERQPRSAQ 528
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/420 (41%), Positives = 248/420 (59%), Gaps = 44/420 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N Q G+T PISL PT D L K L+ YES+ + R EVL L +
Sbjct: 2 NNQTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GP +DID L V PRH TRE DFF
Sbjct: 62 VYEVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFE 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 121 KILRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVA
Sbjct: 181 EKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N++ ST +I+M+EF RG EI + + W L E +FF YK
Sbjct: 301 VITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYK 358
Query: 329 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 387
YL + + NA++ + G VES+LR L K+E+ + HP+ F + YC
Sbjct: 359 FYLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 414
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 285/544 (52%), Gaps = 59/544 (10%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
GIT +S+ GPT+ D + T L+K + +++ + R +VL +L++
Sbjct: 2 FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH DIDTLCV P+H TR FF ML
Sbjct: 62 AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLK 120
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNADEQT 151
+ VTE + +A VP++K F G+ +D+L+ARL+ +PED D+ IL+N +E+
Sbjct: 121 KTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKC 180
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
VRSLNGCRVTD+IL LVP I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVAR C
Sbjct: 181 VRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTC 240
Query: 212 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPI 269
QLYPNA PS L+ +FF ++++W WP PV L E+ G VWDPR NP D+ HLMPI
Sbjct: 241 QLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPI 300
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD------WDTLFEPFTF 323
ITPAYP NS++NVS STL +M E + +E + + + + D W LF F
Sbjct: 301 ITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDF 360
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----- 378
F YK+++ + +A+ + + W G VES +R+L +ER+ Y +L H +
Sbjct: 361 FNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEY-ILIAHVNVDSIELDPA 419
Query: 379 SDKSKPLY-CSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAH 436
+ P Y C +F+GL + V DI+ QA + P M++ +
Sbjct: 420 EEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISHNNYTPDMRVEARY 479
Query: 437 VTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDN--- 491
V R NL F+ P R + SK S+ + + + +TK + K Q+ +N
Sbjct: 480 VKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKENKEK 539
Query: 492 VDTH 495
++TH
Sbjct: 540 LETH 543
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/413 (40%), Positives = 250/413 (60%), Gaps = 41/413 (9%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
+ ++ G+T PIS AGPT + + + LR+ N +ES+ E R EVL L +
Sbjct: 963 TTTKQYGVTAPISTAGPTAKENELNDAMIEELRNQNSFESESETQKRREVLATLQKLTEE 1022
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
V+GPG+DIDTL V P+H TR+ DFF
Sbjct: 1023 FVYTVSRRKNMSEGMARDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRD-DFFTVF 1081
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L + PE+ ++ PVPDA +P++K F GV IDL+ RL + + DL + +++L+N
Sbjct: 1082 EELLRKRPELNKIQPVPDAFMPIIKTVFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNI 1141
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D++ +R+LNG RVTDQIL+LVP+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LV
Sbjct: 1142 DDRDLRALNGTRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLV 1201
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNAV +++VS+FF++Y QW+WP PVLL IE+G L +++W+P+ +D+ H M
Sbjct: 1202 ARICQLYPNAVGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRM 1261
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST +I++ E QRG EI ++ + W LF FF AY
Sbjct: 1262 PVITPAYPSMCATHNITASTQKIILKEMQRGLEIMNDIQFGKR--TWKDLFAKHDFFFAY 1319
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
K YL + + ++ + W G VES+LR L K+E ++ HP+ FS
Sbjct: 1320 KFYLTVITATRDSYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPYVKPFS 1371
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 246/391 (62%), Gaps = 24/391 (6%)
Query: 73 GPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVI 132
PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L I
Sbjct: 2 APRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTI 60
Query: 133 PEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYS 192
PEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YS
Sbjct: 61 PEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYS 120
Query: 193 NVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ 252
N+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L
Sbjct: 121 NILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLP 180
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 312
VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A
Sbjct: 181 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA-- 238
Query: 313 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML--- 369
+W LFE FF+ YK+Y+ + SA W G VES++R L +E++ + L
Sbjct: 239 EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHV 298
Query: 370 --QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS- 421
Q P P + DK + + +GL K+ E D+ ++ F +QA++
Sbjct: 299 NPQSFPAPKENPDKEE-YRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINS 356
Query: 422 -MYTLRKPGMQISVAHVTRRN----LPNFVF 447
M+ + M+I+ HV R+ LPN V
Sbjct: 357 KMFEM---DMKIAARHVKRKQLHQLLPNHVL 384
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 302/572 (52%), Gaps = 101/572 (17%)
Query: 5 NGQRLGITEPISLAGPT------DDDLMR-------------TRK-----------LEKY 34
N G+T PIS A PT +D L+R TRK E++
Sbjct: 2 NHHNYGVTPPISTANPTAKENSLNDSLIRELKARGSFESEAATRKRVEVLNELQKMAERF 61
Query: 35 LRDVNLYESQEEAVSREE-----VLG--RLDQVHGPGADIDTLCVGPRHATREEDFFGEL 87
+ +V+L ++ + ++R+ G RL V+GPG+DID L V P+H TR DFF
Sbjct: 62 VYEVSLQKNMSDGMARDAGGKIFTFGSYRLG-VYGPGSDIDALVVVPKHVTRN-DFFEVF 119
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L E ++ E+ VPDA+VP++K +G+SIDL++ARL + +P+DL + ++L+N
Sbjct: 120 EKILRERKDLEEIAAVPDAYVPIIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNI 179
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LV
Sbjct: 180 DEKDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLV 239
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+PR P D+ H M
Sbjct: 240 ARICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRM 299
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N+++ST +I+M EF+RG +I + N W L TFF Y
Sbjct: 300 PVITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNK--TWANLLARHTFFHNY 357
Query: 328 KNYLRIDISAENA-DDLRNWKGWVESRLRQL----------------------------- 357
K YL I + + ++ W G VESRLR L
Sbjct: 358 KFYLCIVAATKGPYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDS 417
Query: 358 -----------TLKIERHTYNMLQCHPHPG---DFSDKSKPLYCSYFMGLQRKQGVPVGE 403
TL+ E+ T ++ Q P D SD K F+GL+ + G
Sbjct: 418 EKIQEVINTYGTLQGEKLTKDVTQIDPQSKESEDSSDNIKVHLTKLFIGLE--IDLNKGG 475
Query: 404 GEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWD 462
++ DI+ EF + + + + HV +LPN V+ G R RP K +
Sbjct: 476 EKKLDIQYPCSEFFNICKSWQSYDEKLHSVQIKHVKLYDLPNDVYVEGER--RPVKTS-- 531
Query: 463 SRRALERKVSSHTKPGADDGRKRKQTDDNVDT 494
RR L K DD +KR ++ V T
Sbjct: 532 KRRKLAVK---------DDDKKRPKSVGAVAT 554
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/408 (40%), Positives = 246/408 (60%), Gaps = 41/408 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T P+S A PT ++ L + L+ +ES+ R EVL
Sbjct: 6 GVTGPVSTADPTTKEISLNESLIQELKGRGSFESESATKKRAEVLSLFQTLVQQFVYEVS 65
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GP +DID L V PRH TRE DFF +++ +
Sbjct: 66 ISKNMSDGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTTFDKIIRQ 124
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
E+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE+ +R
Sbjct: 125 RSELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDERDLR 184
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L ARICQL
Sbjct: 185 SLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTARICQL 244
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV +++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+ITPA
Sbjct: 245 YPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPA 304
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-R 332
YP M +++N+++ST ++++ E RG I +++ + E W LF FF Y+ YL
Sbjct: 305 YPSMCATHNITSSTQKVILQELTRGSNIMKSILEGEK--SWSDLFARHDFFHRYRFYLCV 362
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
+ ++E+A++ W G+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 363 VAATSESAEEHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDFSN 409
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 6 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 65
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 66 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 125
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 126 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 185
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 336
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 186 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 243
Query: 337 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKPLYCSYFM 391
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 244 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYISMWFL 302
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 446
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 303 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 360
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/454 (39%), Positives = 267/454 (58%), Gaps = 51/454 (11%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S AG T + L + L+ +ES++E +R +VL L +
Sbjct: 2 NYQKVYGITGPVSTAGSTAAENKLNDGLIQELKKEGSFESEQETENRVKVLKTLQELTQE 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYRVSKKKNMSDGMARDAGGKVFPYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L E+ E+ VPDA VP++K KFSG+SIDL+ A L L IP+ L ++ ++L+N
Sbjct: 121 DELLRGRQELEEIAAVPDAFVPIIKMKFSGISIDLICAHLDLAQIPQSLTLADKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ E RG I + N+ W LF+ TFF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILGELGRGIRITNDIFTNKK--TWADLFQRHTFFHEY 358
Query: 328 KNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
K YL + ++A N D ++ W G VES++R L LK+E T + HP+ +KP
Sbjct: 359 KFYLTV-MAATNGDSEQHLKWSGMVESKVRLLVLKLEALT-GIKIAHPY-------TKPF 409
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 419
+Y+ + ++ V + +KEFK+
Sbjct: 410 ETAYYYHNEEERKKIVDNYGTYKTEDVLKEFKKV 443
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/406 (42%), Positives = 244/406 (60%), Gaps = 51/406 (12%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S+ GPT + L + L+ N +ES+ E +R ++L L
Sbjct: 2 NYQKVYGITGPVSVVGPTAPENKLNDLLIQELKSENSFESEAETATRVKILEVLQALTEK 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H +R+ DFF
Sbjct: 62 FVYTVSKRRNMSDGMARDGGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFDVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L E PE+ E+ PVPDA VP++K KFSGVSIDLL A+L + +P+ L +S ++L+N
Sbjct: 121 DKLLRERPELDEIAPVPDAFVPIIKIKFSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++Y+ W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST I++ E QRG +I + N+ W+ LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKSIILQELQRGIQITNDIFTNKK--TWNDLFKRHDFFYKY 358
Query: 328 KNYLRIDISA--ENADDLR---------NWKGWVESRLRQLTLKIE 362
K YL I S DD W G VES+ R L +K+E
Sbjct: 359 KFYLTITASTREHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLE 404
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 242/396 (61%), Gaps = 41/396 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S+AGPT + +L + L+ N +ES++E +R +VL L +
Sbjct: 2 NYQKVYGITGPVSIAGPTAAENKLNDELIQELKKENSFESEQETANRVKVLKTLQELTEK 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ A+L + + L + ++L+N
Sbjct: 121 DALLREREELDEIAPVPDAFVPIIKLKFSGISIDLICAKLDIAQVKPSLTLDDKALLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST +++ E RG ++ + + W LF FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKAVILKELNRGIQVTNDIFAYKK--TWADLFTKHDFFFQY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I + D+ W G VES+LR LTLK+E
Sbjct: 359 KYYLTITAATRGDDEEHLKWSGLVESKLRLLTLKLE 394
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 290/539 (53%), Gaps = 71/539 (13%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS P +++L++TRKL ++ N+YE+ E RE V RL+
Sbjct: 6 GLTGPISEDLPEEENLIQTRKLLDTMKSYNVYENNLEFEHRERVFRRLESLFRDWLKEIC 65
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCVGP R+ FF L
Sbjct: 66 IEMNVPEVVTEKVGGKIFPFGSYHLGVHSKGADIDALCVGPGFLERKA-FFTSFFAKLKA 124
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV ++ + +A+VPV+ + G+ IDL++A LS +P++LD+ +SI+++ D + VR
Sbjct: 125 QKEVKDIQAIEEAYVPVITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDIRCVR 184
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
S NG RVT+QILRLVP + NFR LR ++ WAK+R +YSN GFLGG++WA++VARICQ+
Sbjct: 185 SFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVARICQV 244
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA S LV +FF++++ W WP P+ L +E+ + L WDP+ N D+ HLMPIITPA
Sbjct: 245 YPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIITPA 304
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP N+S NVS STL I+ +E RGH IC+ +E+ +A W LFE FF+ Y++Y +
Sbjct: 305 YPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKA--KWSELFEQTDFFQKYQHYAVL 362
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERH-TYNMLQCHPH--PGDF-SDKSKPLYCSY 389
+ S + W G VES++R L +ER+ ++ HPH PG ++K +
Sbjct: 363 EASYTTEEKCLEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFPGHRKANKKDGQSTMW 422
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 449
+GL + V + E+F+ ++ +Y GM +SVA + R +L ++
Sbjct: 423 LIGLV----LNVKDSERFN------SLARSSDIY---DEGMSLSVACLRREDL---IYEP 466
Query: 450 GVRPSRPSKGTWDSRRALERKVSSHTKPGADD--GRKRKQTDDNVDTHLRNAKCHATMP 506
R +PS E H P + D G K+++ +T + K ++P
Sbjct: 467 QQRAPQPS----------ETLPPCHVSPVSADKQGTKKRELLHRSETPSKKIKDDKSLP 515
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 246/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS PT D+L L L+ N +ES E R++VL + +V
Sbjct: 1 MAAPPVRQWGVTPPISTVLPTPDELAANDDLITELKVQNNFESPAETERRKQVLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKTVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVIID-DFF 119
Query: 85 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L +M + ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ +
Sbjct: 120 SDFPPILEKMAAPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--LRWEDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 TFFTKDYKYYLSITASSRTKEAESVWSGLVESKIRHLVGALDRKA-TIAIAHPFPKGF 414
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 445
+Y++GL+ K P G DI + FK + + +PG+ +++ HV +LP
Sbjct: 484 TTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPED 542
Query: 446 VF-PGGVRPSRPSK 458
VF PG RP+RP K
Sbjct: 543 VFQPGETRPTRPKK 556
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 245/413 (59%), Gaps = 40/413 (9%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD-- 58
M S+N + GIT P SL T + +++KYLR+ N +ES++ +RE VLGRLD
Sbjct: 1 MNSAN-PKYGITGPASLKESTQESTQLANQMDKYLRESNFFESEDAGQTRERVLGRLDFL 59
Query: 59 -----------------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQ 89
VH GADID LCV PRH +R+ DFF ++
Sbjct: 60 VKKFVEKTAPEGEQKNYGGKIFTFGSYRLGVHDRGADIDVLCVVPRHVSRK-DFFTIFYE 118
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 149
L + V E+ + DA+VP++ + G+ IDL +ARL+L VI E++ + D+IL++ DE
Sbjct: 119 ELGQDENVKEISKIEDAYVPIISLTYDGIPIDLTFARLNLPVIAENISLLNDTILRSMDE 178
Query: 150 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 209
+ + SLNG RVTD ILRL+P++ F + LR ++FWAKRR +Y N G+ GG+ +++ VAR
Sbjct: 179 KCILSLNGSRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGVTFSICVAR 238
Query: 210 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
ICQ+YPN +V +FF Y+ W+WP PV LC+I + + L+VWDP+ P DKYH MP+
Sbjct: 239 ICQMYPNLCAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPV 298
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITP YP +NS++NV+ ST ++ E RG+E+ + + LFE FF+ +K
Sbjct: 299 ITPVYPSINSTHNVTQSTFILICSELARGNELM------RSKAPFSKLFEVSGFFKKHKM 352
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
++ + I++E+ W+G+++S++R L K+E + N+ P P F+ +S
Sbjct: 353 FIEVRINSEDLQAFNIWEGYIQSKIRILCTKLE-NLENISLAAPFPKAFTGRS 404
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 280/496 (56%), Gaps = 59/496 (11%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---- 58
S + G+T P+S+ T+ ++ + +++ YL++ +E +E +RE VLG+L+
Sbjct: 4 SERNYKYGVTGPLSMKESTEKEMKLSEEMDMYLQERGFFEDDKEGQTRERVLGKLNFMVR 63
Query: 59 -------------------------------QVHGPGADIDTLCVGPRHATREEDFFGEL 87
VHG G DID LC+ PRH TR DFF
Sbjct: 64 EFVARMGKGRGSGDGEKAYGGKIFTFGSYRLGVHGKGTDIDALCIVPRHVTRN-DFFTHF 122
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++ L P + E+ + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++
Sbjct: 123 YEELKGDPNIKEVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSM 182
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ + SLNG RVTD++L LVP + F + LRC+++WAKRR VY N G+ GG+ ++L V
Sbjct: 183 DEKCILSLNGSRVTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCV 242
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR+CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH M
Sbjct: 243 ARVCQLYPNASSFSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRM 302
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++NVS ST ++ EF R HEI + EKN D+ +F+ FF Y
Sbjct: 303 PVITPAYPSMCATHNVSNSTQHVISMEFARAHEILSSPEKN----DFRKIFDLSDFFSRY 358
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSK 383
K + I + + W+G+VES++R L K E ++L P P F + K
Sbjct: 359 KLFAEILAMSTEEEGFPKWEGYVESKVRILASKFE-AVDDILYAIPFPKAFRVAEENIGK 417
Query: 384 PLY--------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVA 435
Y ++F+ + +PV +G++ + VKEF ++ Y ++ M+I +
Sbjct: 418 IKYGMQDLKKCTAFFIAIDV---IPV-KGKKVVVEQQVKEFVDFMNEYEGKERSMRIEIN 473
Query: 436 HVTRRNLPNF--VFPG 449
+ ++++ NF VF G
Sbjct: 474 SLKKKDVQNFLRVFYG 489
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 247/418 (59%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + +V
Sbjct: 1 MAAAPVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPVLENMAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQ--LTWNDLFTRH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 388 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 446
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+ V
Sbjct: 485 TYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDDV 543
Query: 447 F-PGGVRPSRPSKGTWDSRRALERKVSSH 474
F PG VRPSRP K A +K S H
Sbjct: 544 FQPGEVRPSRPKKKVVKKSEATAQKRSIH 572
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 247/418 (59%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + +V
Sbjct: 1 MAAAPVRQWGVTPPVSNALPTPAEIAANEDLTAELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPVLENMAPLGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIADRIFVGQ--LTWNDLFTRH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLSITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 388 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 446
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+ V
Sbjct: 485 TYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDDV 543
Query: 447 F-PGGVRPSRPSKGTWDSRRALERKVSSH 474
F PG VRPSRP K A +K H
Sbjct: 544 FQPGEVRPSRPKKKVVKKSEATAQKRRIH 572
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 168/395 (42%), Positives = 238/395 (60%), Gaps = 42/395 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
Q+ G+T PIS+A PTD ++ R + L + L+ +E EE+ R VL L
Sbjct: 7 QQYGVTPPISVATPTDKEVERNQALIEELKKQGSFEGAEESQKRVLVLNTLQNLTEGFVK 66
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V+ PG+DIDTL V P H TR DFF L M
Sbjct: 67 KVCANKGMPEHIIKNSGGKIFTYGSYRLGVYAPGSDIDTLLVTPAHITRH-DFFATLPAM 125
Query: 91 LTEM-PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNAD 148
L E+ P +L VPDA VP++KFK +SIDL++ARL+ + +P+D+ +S +L+ D
Sbjct: 126 LQELVPPPEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKELLRGCD 185
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E +R LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LVA
Sbjct: 186 EVNLRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAMLVA 245
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYP AV ++++S+FF++ W WP PVLL IE+G L ++VW+P+ P D+ HLMP
Sbjct: 246 RICQLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMP 305
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAY 327
IITPAYP M +++N++ ST I++ E + EI + + ++ WD LFE +FF Y
Sbjct: 306 IITPAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMV--GNLSWDKLFERHSFFTNGY 363
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
+ YL + +A++ D L W G VES+LR L +K+E
Sbjct: 364 RYYLSVVAAAKDKDTLLGWSGLVESKLRHLVMKLE 398
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 255/485 (52%), Gaps = 86/485 (17%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWIS 76
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH R DFF +
Sbjct: 77 DVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEK 135
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L + L V DA VPV+KF+F G+ +
Sbjct: 136 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEVR----------------------------- 166
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
CRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 167 -------CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 219
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 220 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 279
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y
Sbjct: 280 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHY 337
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPL 385
+ + SA ++ W G VES++R L +ER+ + L H +P F K
Sbjct: 338 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNY 396
Query: 386 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 441
+F+G+ ++ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 397 VSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 455
Query: 442 LPNFV 446
L +++
Sbjct: 456 LHHYL 460
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 242/418 (57%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + + ++ G+T PIS PT D+L L L+ N +E E R++VL L +V
Sbjct: 1 MATPSVRQWGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 85 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
E +L M + ++ PVPDA VP++K + G+SIDL++ARL + IP +LD+ +
Sbjct: 120 AEFPPILQRMASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPAIPMNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFMKQ--LSWQDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF YK YL I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFTHDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPIVAV-AHPFPKGF 414
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNF 445
+Y++GL+ K P G+ DI + FK + + ++ M+++V HV +LP+
Sbjct: 489 TTYYIGLELKPLEP-GQSRSLDISTDSQIFKSTCTSWPGYQEEVMELAVTHVRSFDLPDD 547
Query: 446 VF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQT 488
VF PG R SRP K A +K S G+ +G ++Q
Sbjct: 548 VFQPGETRASRPKKKVTKRSEAAGQKRSIGELDGSTEGAAKRQV 591
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 285/558 (51%), Gaps = 107/558 (19%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS A PT ++L L L+ N +ES E R++VL + +V
Sbjct: 1 MSTPPVRQWGVTPPISTALPTSEELAANDDLISELKAQNNFESPAETERRKQVLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 THEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L +M + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +
Sbjct: 120 SDFPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP+A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQ--LTWNDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 378
+FF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTQDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGFER 416
Query: 379 -------------------------------SDKSKPLYCSYFMGLQRKQGVPVGE---- 403
K + G++ + PVGE
Sbjct: 417 VHIVSNEEEAEAVKNGSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSAN 476
Query: 404 ------------------------GEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVT 438
DI + FK + + +PG+ +S+ HV
Sbjct: 477 GDSHIIYTTTYYIGLELKPLEPGASRSLDISTDAQIFKSTCTSWAGYQPGINDLSITHVR 536
Query: 439 RRNLPNFVF-PGGVRPSR 455
+LP+ VF PG RP+R
Sbjct: 537 NFDLPDDVFQPGETRPTR 554
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 270/492 (54%), Gaps = 54/492 (10%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL-------- 54
S + + GIT P++ GP+ +DL +++L L+ NLYE+ E REEVL
Sbjct: 7 SVDIKSYGITAPVTTEGPSKEDLKASQELIVLLKSYNLYETDEGKKRREEVLESLNRLLQ 66
Query: 55 -----------GRLDQ------------------VHGPGADIDTLCVGPRHATREEDFFG 85
G DQ + P +DID C+ PR TRE FF
Sbjct: 67 QFVRRQVKINMGLTDQEANSVTAKLLTFGSYRLGIVAPDSDIDVACLCPRGITREA-FFS 125
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
+ + LT++ +T+L VPDA+ PV+K + +SID+L++ L + ++++ + IL+
Sbjct: 126 DFYNTLTKVEGITKLQSVPDAYTPVIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILR 185
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N + VRS+NGCRV IL VPK NFRTTLR ++ WA RR +YS V G+LGG+ WA+
Sbjct: 186 NMSDSNVRSINGCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAI 245
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNP 260
L AR+CQ+YPN P+ L+ +FF+V++ W W PV LC I+ G + +VWDP +
Sbjct: 246 LTARVCQMYPNFAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSL 305
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
+D+ HLMPIITPA+P MNS++NV+ +T R++ +E R ++ + + W+ + E
Sbjct: 306 QDRQHLMPIITPAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQL-WEMVLEE 364
Query: 321 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DF 378
F YK++L I++ + W+GW+ SR+R L K+E Y Q P PG F
Sbjct: 365 EDVFSKYKHFLVIEVYGSSEHAHNKWEGWIGSRMRFLIKKLETLEYT--QIRPLPGFFKF 422
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYT---LRKPGMQISV 434
D+ S F K PV EG Q FDIR+ ++ FK+ ++ + K + +++
Sbjct: 423 EDRDWEYASSAFFAF--KHTAPVVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNI 480
Query: 435 AHVTRRNLPNFV 446
++ + LP+++
Sbjct: 481 RYLKSKQLPDYI 492
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 247/418 (59%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + +V
Sbjct: 1 MAAAPTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPILENMAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPPNLDLRNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 374 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 431
HP DK LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 472 HPN--GDKGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 528
Query: 432 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 490
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 529 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 575
Query: 491 NVDTHLRNAKCHAT---MPSSSG 510
N AK HA+ MPS++
Sbjct: 576 NEAPSENPAKRHASPNGMPSAAA 598
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/559 (34%), Positives = 290/559 (51%), Gaps = 80/559 (14%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+TEPISL P+++D+ R+ + + L+ NL+E + RE VLG +++
Sbjct: 83 GVTEPISLNYPSEEDIKRSNDVVELLKGYNLFEEESGLKKRENVLGMINKLFHEFLIELS 142
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V P +DID + + P++ TRE FF E + L +
Sbjct: 143 INQGISEEEANNISGNLYTFGSYRLGVITPNSDIDCIFLAPQNLTRE-IFFNEFYLKLQQ 201
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTV 152
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 202 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTV 261
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RV D IL VP FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQ
Sbjct: 262 RSLNGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQ 321
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMP 268
LYPN S L+ +FF+VY+ W W PVLL I+ EG VWDP +N KDK H+MP
Sbjct: 322 LYPNFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMP 381
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD--------------- 313
IITPA+PCMNS++NV+ T I+++EF+R H I + ME +E ++
Sbjct: 382 IITPAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME-DENNIKSSIRMNKLWPNNNVN 440
Query: 314 ---------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
W T+ EP F YK++L I I N +WKGW+ES++R L K+E
Sbjct: 441 NINNSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE-- 498
Query: 365 TYNMLQCHPHPG-DFSDKSKPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 422
T N L+ P P F K K YC S+F+ L P F++ +++F
Sbjct: 499 TINELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYENT--FNLSYAIRDFIDIALN 556
Query: 423 Y--TLRKP-GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGA 479
+ ++ P +I++ + R + F+ ++ +K ++ ++ ++H + G
Sbjct: 557 WPQKVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGY 613
Query: 480 DDGRKRKQTDDNVDTHLRN 498
+ K KQ D+ D HL N
Sbjct: 614 RNNHKNKQFDE-YDDHLFN 631
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 247/418 (59%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + +V
Sbjct: 1 MAAAPTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPILENMAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 374 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 431
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 432 ISVAHVTRRNLPNFVF-PGGVRPSRPSK 458
+++ HV +LP VF PG VRPSRP K
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK 550
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 285/538 (52%), Gaps = 90/538 (16%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS A PT ++L L L+ N +ES E R++VL L +V
Sbjct: 1 MSTPPVRQWGVTPPISTALPTPEELAANDDLISELKAQNNFESPAETERRKQVLQLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 THEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L +M + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +
Sbjct: 120 SDFPPVLEKMAPPGAIEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP+A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPHATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIFLKQ--LTWNDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 378
+FF + YK YL I S+ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTQDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGFER 416
Query: 379 -------------------------------SDKSKPLYCSYFMGLQRKQGVPVGE---- 403
K + G++ + PVGE
Sbjct: 417 VHIVSNEEEAEAVKNGSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSVN 476
Query: 404 GEQFDIRLTVKEFKQAVSMYTLRKPGMQ-----ISVAHVTRRNLPNFVF-PGGVRPSR 455
G+ I T + + + L +PG Q +S+ HV +LP+ VF PG RP R
Sbjct: 477 GDSHIIYTTT--YYIGLELKPL-EPGYQPGINDLSITHVRNFDLPDDVFQPGETRPMR 531
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 247/418 (59%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M ++ ++ G+T P+S A PT ++ L L+ N +E+ E R++ L + +V
Sbjct: 1 MAAAPTRQWGVTPPVSNALPTPAEIAANDDLTTELKRQNNFEAPAETERRKQTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDVAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPILENMAPKGAIEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DKYHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 300 DKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I ++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 358 TFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 374 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 431
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 432 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 490
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 569
Query: 491 NVDTHLRNAKCHAT---MPSSSG 510
N AK HA+ MPS++
Sbjct: 570 NEAPSENPAKRHASPNGMPSAAA 592
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 245/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS+ PT ++L L L+ N +E E R++ L + +V
Sbjct: 1 MAAQPTRQWGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPAETERRQQTLQLIQKV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL V P+H + DFF
Sbjct: 61 VIEFVKTVGRRKGLSPAVLEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVLID-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + ++ PVPDA VP++K +FSG+S+DL++ARL L IP +LD+ +
Sbjct: 120 SDFPPILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ D++ VRSLNG RVTDQIL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDDKEVRSLNGTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ T+W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHT 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++N+S ST +++ E QRG +I + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDIVDKIFAKQ--LTWNDLFTRH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF YK YL+I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFSKDYKYYLQITASSKTKEADSVWSGLVESKLRHLVGALDRKNI-IAVAHPFPKGF 414
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 245/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS+ PT ++L L L+ N +E E R++ L + +V
Sbjct: 1 MAAQATRQWGVTPPISMNLPTPEELAANDDLIAELKAQNNFELPSETERRQQTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL V P+H + DFF
Sbjct: 61 VIEFVKTVGRRKGLSPAALEAAGGKIFTYGSYRLGVYGPGSDIDTLIVAPKHVMID-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + ++ PVPDA VP++K +FSG+SIDL++ARL L +P +LD+ +
Sbjct: 120 SDFPPILERMSPPGAIEKMTPVPDAFVPIIKLEFSGISIDLIFARLILPSVPLNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ D++ VRSLNG RVTDQIL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDDKEVRSLNGTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ T+W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++N+S ST +++ E QRG ++ + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISLSTKAVILRELQRGGDMVDKIFAKQ--LTWNDLFTRH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF YK YL+I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFSKDYKYYLQITASSKTKEAESVWSGLVESKLRHLVGALDRKNIIAI-AHPFPKGF 414
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 445
+Y++GL+ K P G DI + FK + + + G+ +SV HV +LP+
Sbjct: 484 TTYYIGLELKPLEP-GASRSLDISVDANIFKSTCTSWQGFQEGINDLSVTHVRSFDLPDD 542
Query: 446 VF-PGGVRPSRPSK 458
VF PG RP+RP K
Sbjct: 543 VFEPGEARPTRPKK 556
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 240/406 (59%), Gaps = 41/406 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T IS AGP+ ++ L LR +ES+ + R +VL L Q
Sbjct: 363 GVTPAISTAGPSSEETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVS 422
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GPG+DIDTL V P+H RE DFF ++L +
Sbjct: 423 KSKNMDEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKILRQ 481
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PE+ E+ VPDA VP++K +F G+SIDL+ ARL + +P +L + ++L+N DE+ +R
Sbjct: 482 RPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLR 541
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
+LNG RVTD+IL LVP+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVARICQL
Sbjct: 542 ALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQL 601
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV ++++S+FF + QW WP PVLL IE+G L ++VW+PR P DKYH MP+ITPA
Sbjct: 602 YPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPA 661
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP M +++N++ ST ++++ EFQRG I E W LF FF YK YL +
Sbjct: 662 YPSMCATHNITESTKKVILQEFQRGSGIVT--EIFSGAKKWSDLFTKHDFFRRYKFYLTV 719
Query: 334 DISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+ + ++++ + + G VES+LR L K+E + N+ HP F
Sbjct: 720 IAATKGSSEEQKKFAGMVESKLRLLVQKLENNE-NINLAHPFVKTF 764
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 247/423 (58%), Gaps = 48/423 (11%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
K YL I +D+ W G VES++R L +K+E T + HP +KP
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLT-GIKIAHPF-------TKPFE 410
Query: 387 CSY 389
SY
Sbjct: 411 SSY 413
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 245/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS PT D+L L L+ N +ES E R+EVL L +V
Sbjct: 1 MATPPVRQWGVTPPISTVLPTPDELAANDDLIAELKRQNNFESPAETEQRKEVLKLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+ + DFF
Sbjct: 61 TIEFVKVVSRKKGLSEAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKQVLID-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M + ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ +
Sbjct: 120 SDFPPVLERMAPPGAIEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPINLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E QRG ++ + + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKNVILRELQRGGDMVDKIFMKQ--LTWNDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF + YK YLRI ++ + W G VES++R L ++R + HP P F
Sbjct: 358 SFFTKDYKYYLRITAASTTKEADSVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGF 414
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 247/421 (58%), Gaps = 46/421 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N Q G+T PIS+A T + L K L+ +ES+ R EVL L
Sbjct: 2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H +R DFF +
Sbjct: 62 VYKVSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFY 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N D
Sbjct: 121 ELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYK 358
Query: 329 NYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
YL I + + A+ L+ + G VES+LR L K+E + HP+ F + Y
Sbjct: 359 FYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YY 413
Query: 387 C 387
C
Sbjct: 414 C 414
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 244/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS PT D+L L L+ N +ES E R+ L + +V
Sbjct: 1 MATPPVRQWGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVID-DFF 119
Query: 85 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M P+ V ++ PVPDA VP++K +FSG+SIDL+YARL + +P +LD+ +
Sbjct: 120 SDFPPVLERMAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQN--TWNDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF YK YL I S+ + W G VES++R L ++R + + HP P F
Sbjct: 358 SFFTRDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 247/421 (58%), Gaps = 46/421 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N Q G+T PIS+A T + L K L+ +ES+ R EVL L
Sbjct: 2 NNQAYGVTPPISVANSTPKENELNDSLIKELKSRGSFESETATKKRVEVLNILQSMTEEF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GPG+DIDTL V P+H +R DFF +
Sbjct: 62 VYKVSIKKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFY 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N D
Sbjct: 121 ELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVA
Sbjct: 181 EKDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYK 358
Query: 329 NYLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 386
YL I + + A+ L+ + G VES+LR L K+E + HP+ F + Y
Sbjct: 359 FYLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YY 413
Query: 387 C 387
C
Sbjct: 414 C 414
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 244/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS PT D+L L L+ N +ES E R+ L + +V
Sbjct: 1 MATPPVRQWGVTPPISTVLPTPDELAANDDLISELKLQNNFESPAETEHRKNTLQLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVKVVSRKKGLSPAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLIVGPKHVVID-DFF 119
Query: 85 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L M P+ V ++ PVPDA VP++K +FSG+SIDL+YARL + +P +LD+ +
Sbjct: 120 SDFPPVLERMAPQGAVEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E QRG +I + + + W+ LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKTVILRELQRGGDIVDKIFLKQN--TWNDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF YK YL I S+ + W G VES++R L ++R + + HP P F
Sbjct: 358 SFFTRDYKYYLSITASSRTKEAEAVWSGLVESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/413 (40%), Positives = 244/413 (59%), Gaps = 41/413 (9%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N Q G+T PISL+ PT + L K L+ YES+ + R EVL L +
Sbjct: 2 NTQSYGVTPPISLSDPTSKEKELNDLLIKELKLRGSYESESATLKRVEVLTTLQKLTEQF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GP +DID L V PRH TR+ DFF
Sbjct: 62 VYEVSLQRNMSQGMAKDAGGKIFTFGSYKLGVYGPSSDIDALVVVPRHVTRD-DFFTVFE 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L E+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 121 KILRGRQELEEINCVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R +Y+NV GF GG+ WA+LVA
Sbjct: 181 EKDMRALNGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N+++ST +I+M EF RG EI + + W L E FF YK
Sbjct: 301 VITPAYPSMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQK--SWSDLLERHDFFHKYK 358
Query: 329 NYL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
YL + + N ++ + G VES+LR L K+E+ + HP+ F +
Sbjct: 359 FYLCVVAATKSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSFEN 410
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 239/396 (60%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E++ E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLVQELKKEGSFETEHETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P+ L ++ ++L+N
Sbjct: 121 DALLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPQSLTLADKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF+RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKK--SWANLFEKNDFFYRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWGGLVESKVRLLIMKLE 394
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 242/396 (61%), Gaps = 41/396 (10%)
Query: 5 NGQRL-GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
N Q++ GIT P+S GPT + +L + L+ N +E++ E R +L L +
Sbjct: 2 NYQKIYGITGPVSTVGPTAAENKLNDELIQELKKENSFETELETEKRVNILKTLQKLTEE 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H +R+ DFF
Sbjct: 62 FVYRVSKKKNMSDGMARDSGGKVFTFGSYRLGVHGPGSDIDTLIVVPKHVSRD-DFFTIF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L E+ E+ PVPDA VP++K +FSG+SIDLL ARL L IP L +S ++L+N
Sbjct: 121 AELLRGREEIEEIAPVPDAFVPIIKTQFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R++NG RVTD+IL LVPK FR LR ++ WA RR +Y+NV GF GG+ WA+LV
Sbjct: 181 DEKDLRAINGTRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF++ +W+WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF+RG ++ + N+ W LF+ FF Y
Sbjct: 301 PVITPAYPSMCATHNITDSTKKVILQEFERGVQVTNDIFTNKK--TWADLFKKHEFFHKY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL + S + + W G+VES+LR L LK+E
Sbjct: 359 KFYLTVVASTRGSTEQHLKWSGFVESKLRLLVLKLE 394
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 240/406 (59%), Gaps = 41/406 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T IS AGP+ ++ L LR +ES+ + R +VL L Q
Sbjct: 6 GVTPAISTAGPSSEETRLNDLLVDELRRQGSFESEAATLKRAKVLKTLQQLTQEFVYSVS 65
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
V+GPG+DIDTL V P+H RE DFF ++L +
Sbjct: 66 KSKNMDEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVFPKHINRE-DFFTVFEKILRQ 124
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
PE+ E+ VPDA VP++K +F G+SIDL+ ARL + +P +L + ++L+N DE+ +R
Sbjct: 125 RPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDEKDLR 184
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
+LNG RVTD+IL LVP+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVARICQL
Sbjct: 185 ALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVARICQL 244
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNAV ++++S+FF + QW WP PVLL IE+G L ++VW+PR P DKYH MP+ITPA
Sbjct: 245 YPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPA 304
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
YP M +++N++ ST ++++ EFQRG I E W LF FF YK YL +
Sbjct: 305 YPSMCATHNITESTKKVILQEFQRGSGIV--TEIFSGAKKWSDLFTKHDFFRRYKFYLTV 362
Query: 334 DISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+ + ++++ + + G VES+LR L K+E + N+ HP F
Sbjct: 363 IAATKGSSEEQKKFAGMVESKLRLLVQKLENNE-NINLAHPFVKTF 407
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 238/396 (60%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 238/396 (60%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/415 (40%), Positives = 244/415 (58%), Gaps = 44/415 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV--- 60
S ++ G+T PIS PT +L L L+ N +ES E R++VL L +V
Sbjct: 6 STTRQWGVTPPISTTLPTAQELSANDDLIAELKLQNNFESPAETERRKQVLQLLQRVTIE 65
Query: 61 ---------------------------------HGPGADIDTLCVGPRHATREEDFFGEL 87
+GPG+DIDTL +GP+H + DFF E
Sbjct: 66 FVKVVSRKKGLSQAAVEAAGGKIFTYGSYRLGVYGPGSDIDTLVLGPKHVVID-DFFAEF 124
Query: 88 HQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
+L M P+ V ++ PVPDA VP++K + SG+SIDL++ARL + IP +LD+ + L
Sbjct: 125 PPLLESMAPQGAVEKITPVPDAFVPLIKLELSGISIDLIFARLIVPSIPLNLDLKNNDYL 184
Query: 145 QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA
Sbjct: 185 RGLDEKEVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWA 244
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++
Sbjct: 245 MLVARVCQLYPQATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRF 304
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP M +++N+S ST +++ E QRG +I + + +A W+ LF+ +FF
Sbjct: 305 HLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDIVDKIWAKQA--TWNDLFKKHSFF 362
Query: 325 -EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
YK YL + S+ + W G VES++R L ++R + HP P F
Sbjct: 363 TNDYKYYLGVTASSRTKEAESVWSGLVESKVRHLVGALDRKP-TIAVAHPFPKGF 416
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/467 (37%), Positives = 260/467 (55%), Gaps = 64/467 (13%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
+ Q G+T PIS PTD +L T L + L+ +ESQ + REEVL +
Sbjct: 2 TTDQAYGVTPPISSQLPTDAELRATDALLEELKRQKTFESQADTAKREEVLASIQNIANA 61
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
V+GPG+DIDTL + P++ TR+ D+F
Sbjct: 62 FIRQVAQEKEPKNDVLIRNARGRVFTYGSYRLGVYGPGSDIDTLIIAPKYVTRD-DYFKY 120
Query: 87 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS- 142
+L M +T L V DA VP++KF++SG+SIDL+++R+ +P D +DS
Sbjct: 121 FPDLLVSMAPKDAITGLAVVTDAFVPIIKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSG 180
Query: 143 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 202
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 203 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 262
WA+LVAR+CQLYP A PS++V++FF V +QWRWP PVLL IE G L ++VW+PR D
Sbjct: 241 WAMLVARVCQLYPKATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGD 300
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+HLMP+ITPAYP M +++N++ S+++++ E R +I E++ + W LF T
Sbjct: 301 SFHLMPVITPAYPSMCATFNITRSSMKVINRELSRALQISESIMVGKR--PWSDLFVKHT 358
Query: 323 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML------------ 369
FF + YK Y+ + SA++ +D + W G+VES++R L K+E+H L
Sbjct: 359 FFTQGYKYYISVISSAKSKEDHKIWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYDRHH 418
Query: 370 QCHP--HPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
+CH D S C+ +R + PVG+ E L +K
Sbjct: 419 RCHSDQEIAAVQDGSLDYLCT-----ERTEETPVGKSEPAVAELPIK 460
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 238/396 (60%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 241/418 (57%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ G+T PIS PT D+L L L+ N +E E R++VL L +V
Sbjct: 1 MATPPVRQWGVTPPISTVLPTKDELSANDDLIAELKAQNNFELPTETERRKQVLQLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + DFF
Sbjct: 61 TVEFVQVVSRKKGLSPAAVEASGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVLID-DFF 119
Query: 85 GELHQMLTEMPE---VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
E +L M + ++ PVPDA VP++K + G+SIDL++ARL + IP +LD+ +
Sbjct: 120 AEFPPVLERMASEGAIEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPSIPMNLDLKNN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L+ DE+ VRSLNG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DYLRGLDEREVRSLNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++N+S ST +++ E QRG ++ + + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNISMSTKAVILRELQRGGDMVDKIFMKQ--LSWHDLFARH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF YK YL I S++ + W G VES+LR L ++R + HP P F
Sbjct: 358 TFFTHDYKYYLSITASSKTKEAESVWSGLVESKLRHLVGALDRKPI-IAVAHPFPKGF 414
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 376 GDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS 433
G ++ + +Y + Y++GL+ K P G+ DI + FK + + ++ M+++
Sbjct: 477 GTVDNEGQTVYTTTYYIGLELKPLEP-GQSRSLDISTDSQIFKSTCTSWPGYQEEVMELA 535
Query: 434 VAHVTRRNLPNFVF-PGGVRPSRPSK 458
V HV +LP+ VF PG R SRP K
Sbjct: 536 VTHVRSFDLPDDVFQPGETRASRPKK 561
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 238/396 (60%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 238/396 (60%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H RE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVIRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DALLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF+RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 238/396 (60%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 267/482 (55%), Gaps = 23/482 (4%)
Query: 29 RKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------HGPGADIDTLCVGPRHAT 78
+K++K L++ L+E+ E + + Q+ H P ADID LC+ PRH T
Sbjct: 51 KKVDKILKEFALHEAINEGIEEMQAKKLRIQLKTFGSYRLGCHHPDADIDVLCLAPRHCT 110
Query: 79 REEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 138
R + FF +L +L V++LH +P+A VPV+KFK G+++D+L++ L L IPE ++I
Sbjct: 111 RVK-FFQKLPILLEVSSFVSDLHVIPNAFVPVIKFKVDGIAVDMLFSCLYLESIPEHINI 169
Query: 139 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 198
D L D+ +VRSLNGCRVT++IL+L+ + FR TL +++WA+ RG+YSNV GFL
Sbjct: 170 LDDQFLNGLDDVSVRSLNGCRVTEKILQLISHQEYFRITLTAIKYWARNRGIYSNVLGFL 229
Query: 199 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC-AIEEGSLGLQVWDPR 257
GG+N A++ A++CQLYP+A+P L+ +FF +Y W WPNP+ + I LG W+P+
Sbjct: 230 GGVNLAIMAAKVCQLYPDALPPTLLIKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPK 289
Query: 258 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 317
PKD+ HLMPIITP YP +NSSYNV +STL +M EF+ + + W L
Sbjct: 290 VYPKDRLHLMPIITPCYPSINSSYNVMSSTLDVMKTEFKNAS--LQVSNVRAKVLSWSEL 347
Query: 318 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
+FF+ Y+++L++ IS+E+ +D W WVESRLR +++E + ++ +
Sbjct: 348 LTEASFFDKYRHFLQVQISSEDEEDFGRWVTWVESRLRTFFIRLEAIPFVRIRPFARFFN 407
Query: 378 FSDKSKPLYCSYF---MGLQRKQGVPVGEGE---QFDIRLTVKEFKQAVSMYTLRKPGMQ 431
F + K Y S+F + QR + E D V+ F V + R M
Sbjct: 408 FQEL-KGAYISWFFVALDFQRPEDKRQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMD 466
Query: 432 ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 491
+ V HV R +P +V R KG R+A + + S+ T + D +
Sbjct: 467 LEVKHVVRSQIPAWVIDATYRNFATVKGL--IRKAEQYRYSAATPANGEATSSSNFCDSD 524
Query: 492 VD 493
++
Sbjct: 525 IE 526
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 301/579 (51%), Gaps = 109/579 (18%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------ 60
++ G+T P+S PT++ +T L + LR +ES E R +VL L V
Sbjct: 5 KQYGVTPPLSTEMPTEEQRRQTDALLEELRQQGTFESTAETQKRFKVLESLRMVADAFVK 64
Query: 61 -------------------------------HGPGADIDTLCVGPRHATREE--DFFGEL 87
+ PG+DIDTL V P++ +RE+ ++F E+
Sbjct: 65 RVAKEKAPDNPTLFRDACAKIFTYGSFRLGVYMPGSDIDTLVVAPKYVSREDYFNYFPEM 124
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED--LDISQDSILQ 145
Q +T +T+L PV DA VP++KF+++G+SIDL+++R+ L +P D + ++L+
Sbjct: 125 LQAMTPPGSITDLTPVEDAFVPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLLR 184
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
DE +RS+NG RVTD+IL LVP+ + FR LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 185 GLDEAELRSVNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWAM 244
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
+VAR+CQLYP A +++VS+FF + +W WPNPVLL IE+G L ++VW+P+ D++H
Sbjct: 245 MVARVCQLYPKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFH 304
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
+MPIITPAYP M ++YN+S S+L I+ E +R EI + + W LF TFF
Sbjct: 305 IMPIITPAYPSMCATYNISQSSLSIIKRELERASEISQMIISGRQ--QWKDLFVKHTFFT 362
Query: 326 A-YKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERH-------TYNMLQCHPH-- 374
+ YK Y+ + ISA D +N W G+VES++R L +ERH +N H
Sbjct: 363 SDYKYYISV-ISASTEKDAQNTWSGFVESKVRVLVQGLERHESIALARAFNKGYERTHMC 421
Query: 375 -------------------------PGDFSDKSKP------------LYCSYFMGLQRKQ 397
GD +D + P ++++G++ +
Sbjct: 422 KNQADIDAVQNGSLDFMVHKSDEARTGDGADGAAPKDAANSADAIEVFTLTHYIGIELVE 481
Query: 398 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPNFVF-PGGVR 452
G + D+ V EFK+ + K + +S+ HV LP+ VF PG V+
Sbjct: 482 G-----AKSLDLSFQVDEFKELCFGWDKYKGKLSDVATLSIQHVRNVTLPDDVFEPGEVK 536
Query: 453 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 491
P RP+KG RR + A+ +KR ++DN
Sbjct: 537 PVRPTKGLRQGRR-------NPAAVAANGNKKRIASEDN 568
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 285/557 (51%), Gaps = 72/557 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
GIT +S+ GPT+ D + T L+K + +++ + R +VL +L++
Sbjct: 2 FGITSALSVEGPTEKDKVMTEDLQKTIEPYGAFDTPDGLSHRIQVLTKLNELVKDFVRKV 61
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VH DIDTLCV P+H TR FF ML
Sbjct: 62 AKECRLPEHLHGELGGKIYTFGSYRLGVHTSDGDIDTLCVVPQHVTRHH-FFTIFLDMLK 120
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNADEQT 151
+ VTE + +A VP++K F G+ +D+L+ARL+ +PED D+ IL+N +E+
Sbjct: 121 KTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLEEKC 180
Query: 152 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 211
VRSLNGCRVTD+IL LVP I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVAR C
Sbjct: 181 VRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVARTC 240
Query: 212 -------------QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDP 256
QLYPNA PS L+ +FF ++++W WP PV L E+ G VWDP
Sbjct: 241 QVGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDP 300
Query: 257 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD--- 313
R NP D+ HLMPIITPAYP NS++NVS STL +M E + +E + + + + D
Sbjct: 301 RFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPN 360
Query: 314 ---WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 370
W LF FF YK+++ + +A+ + + W G VES +R+L +ER+ Y +L
Sbjct: 361 TRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEY-ILI 419
Query: 371 CHPHPGDF-----SDKSKPLY-CSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMY 423
H + + P Y C +F+GL + V DI+ QA +
Sbjct: 420 AHVNVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISH 479
Query: 424 TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPGADD 481
P M++ +V R NL F+ P R + SK S+ + + + +TK +
Sbjct: 480 NNYTPDMRVEARYVKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEES 539
Query: 482 GRKRKQTDDN---VDTH 495
K Q+ +N ++TH
Sbjct: 540 ESKNSQSKENKEKLETH 556
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 237/396 (59%), Gaps = 40/396 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ + GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 2 SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQR 61
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
VHGPG+DIDTL V P+H TRE DFF
Sbjct: 62 FVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVF 120
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
DE+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H M
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
P+ITPAYP M +++N++ T ++++ EF RG +I + N+ W LFE FF Y
Sbjct: 301 PVITPAYPSMCATHNITECTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRY 358
Query: 328 KNYLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 362
K YL I +D+ W G VES++R L +K+E
Sbjct: 359 KFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 243/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL------ 54
M +S ++ G T PIS A PT +L L L+ N +E+ E R ++L
Sbjct: 1 MATSQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 55 --------GR---LDQ-------------------VHGPGADIDTLCVGPRHATREEDFF 84
GR L Q V+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFPYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ L + + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERLAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 358 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIEVAHPFPKGF 414
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/410 (40%), Positives = 243/410 (59%), Gaps = 43/410 (10%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS+A T ++ +L K L+ +ES+ R EVL + +
Sbjct: 6 LGVTPPISVANATPKEISLNDELIKELKIRGSFESENATKRRVEVLNIMQKLTEEFVYIV 65
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+G G+DIDTL V P+H R+ DFF +L
Sbjct: 66 SKRKNMSDGMAKDAGGKIFTFGSYRLGVYGQGSDIDTLVVVPKHVNRQ-DFFDVFVDLLK 124
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ E+ E+ VPDA VP++K +F G+SIDL++A+L + +P DL + ++L+N DE+ +
Sbjct: 125 KRSELEEITSVPDAFVPIIKMEFGGISIDLIFAKLDIPRVPRDLTLDNKNLLKNLDEKDL 184
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVARICQ
Sbjct: 185 RSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVARICQ 244
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPN V +++V +FF++Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+ITP
Sbjct: 245 LYPNTVSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITP 304
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M +++N++ ST ++M EF RG + + A W LFE FF YK YL
Sbjct: 305 AYPSMCATHNITKSTKDVIMSEFNRGVNVMAQIHAGTA--SWGLLFERHRFFFQYKFYLC 362
Query: 333 IDISAE--NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
I + + +A+ L+ W G +ES++R L K+E T + HP+ F +
Sbjct: 363 IVAATKSSSAEHLK-WSGMIESKVRLLVQKLEL-TEGITLAHPYVKPFEN 410
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 242/418 (57%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL------ 54
M + ++ G T PIS A PT +L L L+ N +E+ E R ++L
Sbjct: 1 MATPQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 55 --------GR---LDQ-------------------VHGPGADIDTLCVGPRHATREEDFF 84
GR L Q V+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ L M + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERMAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 358 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 414
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/467 (37%), Positives = 253/467 (54%), Gaps = 86/467 (18%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----------- 58
G+++P+SL PT++DL + + + L+ NL+E+++ RE+VLG ++
Sbjct: 82 GVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELS 141
Query: 59 -----------QVHG--------------PGADIDTLCVGPRHATREEDFFGELHQMLTE 93
+++G P +DID + + P++ TRE FF E + L +
Sbjct: 142 INQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITREI-FFNEFYLKLQQ 200
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED-LDISQDSILQNADEQTV 152
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 201 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCCYTLDNDYILKNLDEVTV 260
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RV D IL VP NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+ICQ
Sbjct: 261 RSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQ 320
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMP 268
+YPN S L+ +FFRVY+ W W PVL+ I+ EG +WDP +N KDK H+MP
Sbjct: 321 IYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMP 380
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVD-------------- 313
IITPA+PCMNS++NV+ T I+++EF+R H I M+ N +AD+
Sbjct: 381 IITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGN 440
Query: 314 -------------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 348
W + EPF F+ YK++L I I N WKG
Sbjct: 441 AININNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKG 500
Query: 349 WVESRLRQLTLKIERHTYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 393
W+ES++R L K+E T N L+ P P ++ K K YC S+F+ L
Sbjct: 501 WIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 269/488 (55%), Gaps = 53/488 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+++PISLA PT DL T L + L+ V +E++EE R +VL L+
Sbjct: 822 GVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGIS 881
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
VH G DID++ + PR +R DFF L +L
Sbjct: 882 SARLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILLRN 940
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VRS
Sbjct: 941 PNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRS 1000
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
LNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR CQLY
Sbjct: 1001 LNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLY 1060
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIIT 271
PNA PS LV + F V++ W +P+P++LC + D RN D++HLMPIIT
Sbjct: 1061 PNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHLMPIIT 1120
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK+++
Sbjct: 1121 PAFPEQNSTHNVSRSTMEVIKKEMADALIICNDV--FEGKCDWKFLFEEVNFYSQYKHFV 1178
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYF 390
+ + A+ + ++ G++ESRLR L ER+ + +P + KS+ L +F
Sbjct: 1179 VMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL---WF 1235
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVF 447
+GL+ + V + D+ + FK +++ + G +++ +++V R L ++
Sbjct: 1236 IGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEDVELDISYVKRSQLIKYLP 1290
Query: 448 PGGVRPSR 455
++ R
Sbjct: 1291 AAELKKGR 1298
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/467 (37%), Positives = 253/467 (54%), Gaps = 86/467 (18%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----------- 58
G+++P+SL PT++DL + + + L+ NL+E+++ RE+VLG ++
Sbjct: 82 GVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELS 141
Query: 59 -----------QVHG--------------PGADIDTLCVGPRHATREEDFFGELHQMLTE 93
+++G P +DID + + P++ TRE FF E + L +
Sbjct: 142 INQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKLQK 200
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTV 152
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 201 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTV 260
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNG RV D IL VP NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+ICQ
Sbjct: 261 RSLNGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQ 320
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMP 268
+YPN S L+ +FFRVY+ W W PVL+ I+ EG +WDP +N KDK H+MP
Sbjct: 321 IYPNYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMP 380
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVD-------------- 313
IITPA+PCMNS++NV+ T I+++EF+R H I M+ N +AD+
Sbjct: 381 IITPAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGN 440
Query: 314 -------------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 348
W + EPF F+ YK++L I I N WKG
Sbjct: 441 AININNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKG 500
Query: 349 WVESRLRQLTLKIERHTYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 393
W+ES++R L K+E T N L+ P P ++ K K YC S+F+ L
Sbjct: 501 WIESKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/465 (38%), Positives = 252/465 (54%), Gaps = 82/465 (17%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
+ G+++PI+L PT++DL + + + L+ NL+E+++ RE VLG +++
Sbjct: 92 KYGVSDPITLNYPTEEDLKKANDVVELLKSYNLFETEQALKKRERVLGMINKLFHEFVVE 151
Query: 60 --------------VHG--------------PGADIDTLCVGPRHATREEDFFGELHQML 91
+HG P +DID + + P++ TRE FF E + L
Sbjct: 152 ISISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 210
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQ 150
+ V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 211 QQDRNVRKLQSLPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 270
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+I
Sbjct: 271 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKI 330
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYH 265
CQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H
Sbjct: 331 CQLYPNYNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLH 390
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------- 313
+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 391 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVT 450
Query: 314 -----------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 350
W + +P F +YK++L I I A N +WKGW+
Sbjct: 451 PVSAPTTSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWI 510
Query: 351 ESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYC-SYFMGL 393
ES++R L K+E T N L+ P+P + K K YC S+F+GL
Sbjct: 511 ESKIRLLFKKLE--TINELKIRPYPKFYVYKKDKFYYCSSFFIGL 553
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 244/409 (59%), Gaps = 41/409 (10%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
G+T PIS P+ ++ +L L+ +ES++ R E+L +
Sbjct: 6 FGVTPPISTDNPSPKEITLNDQLIAELKARGSFESEQATRKRVEILNLFQKLVQEFVHKV 65
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+GPG+DIDTL V P+H TRE DFF ++
Sbjct: 66 SKSKNMSEGMAKDAGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVTRE-DFFSVFESIVR 124
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E PE+ E+ VPDA VP++K +F G+SIDL+ A L++ +P ++ + ++L+N DE+ +
Sbjct: 125 ERPELEEITSVPDAFVPIIKIEFDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDERDM 184
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
R+LNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA++VARICQ
Sbjct: 185 RALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVARICQ 244
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR D+ H MPIITP
Sbjct: 245 LYPNAVGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITP 304
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M +++N+++ST ++++ E +G +I ++ + W LF+ FF YK YL
Sbjct: 305 AYPSMCATHNITSSTQKVILSELVKGVDIVGDIKLGKR--TWSDLFQRHDFFFRYKFYLC 362
Query: 333 IDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
I + + N ++ W G+VES+LR L K+E T + HP+ DF+D
Sbjct: 363 IVVGTKANEEEHSKWSGFVESKLRLLVQKLE-ATSGIEIAHPYVKDFND 410
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/513 (35%), Positives = 290/513 (56%), Gaps = 73/513 (14%)
Query: 12 TEPIS--------LAGPTDDDLMRTRKLEKYLR-DVNLYESQEEAVSREEVLGRLDQ--- 59
TEPI+ L T +D + ++++ + L+ D N YES+ + R+ +LG+L+Q
Sbjct: 27 TEPITTNFERRYYLEKSTYEDTLESKQIVEILKNDFNQYESEGDRKKRDAILGKLNQIIV 86
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
VH P DID LCV PRH R FFGE
Sbjct: 87 EWIQNVGKREGKDDDTVKNSGGKIFTFGSYRLGVHSPDTDIDALCVAPRHIERTRHFFGE 146
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQ 145
L +L P V +L V +A+VPV+ F GV IDLL+AR+ L + ++L ++ D+IL+
Sbjct: 147 LSDILKNHPGVQKLTEVQEAYVPVINMVFEGVEIDLLFARVELKEVGQELVNLLDDNILR 206
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D++++RSLNGCRVTD IL+LVP ++FRTTLR ++ WAK RG+YSNV GFLGG+ WA+
Sbjct: 207 NCDKESIRSLNGCRVTDSILQLVPNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGVAWAI 266
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRW--PNPVLLCAI--EEGSLGLQVWDPRRNPK 261
LVA IC PN P+ L++ FF+ YTQW W NP+LL I + S+ + +
Sbjct: 267 LVANICITCPNLEPNKLLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEE 326
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA-MEKNE------ADVDW 314
+ LMPIITPA+P MN+++NVS ST R M+ EF++G +I EA + +NE +++W
Sbjct: 327 KQTDLMPIITPAFPSMNATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMNW 386
Query: 315 DTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQC 371
LF+ F FF++Y ++++I I +++A+D + W G++ES++R+L ++E+ ++
Sbjct: 387 RRLFKKFNFFKSYVHFIQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEF 446
Query: 372 HPHPGDFSDKSK---PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS------- 421
P P + ++ P+ +Y+ G++ K+ + + D+ T+K F + +
Sbjct: 447 RPWPKSYHLENNLDFPMDDTYYFGIRIKKNESDAQM-RIDLTDTIKIFYKKLREWISVDH 505
Query: 422 --MYTLRKPGMQISVAHVTRRNLPNFVFPGGVR 452
M + + I + ++ R LP+ + P G +
Sbjct: 506 KLMQMIVDKLVDIKINYIRRETLPDVIRPRGAQ 538
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/408 (41%), Positives = 241/408 (59%), Gaps = 51/408 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+++PIS P D++ T +L L+ N YE +EE R EVL L++
Sbjct: 12 LGVSQPISTLRPDQKDIVMTDQLIATLKKFNSYEPKEETEKRMEVLRSLNRLVKEWVKKV 71
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADIDTL V PRH R DFF +ML +
Sbjct: 72 TAIKIPSGEGANAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRT-DFFTSFKEMLRQ 130
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ D+ D +L+N D+++VR
Sbjct: 131 DPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNLDQESVR 190
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRV + +L+LVP+ + F LR ++ WAK G+YSN GF GGI+WA+LVAR CQL
Sbjct: 191 SLNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILVARACQL 250
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKYHLMP 268
YPNA S +V R F +++ W WP+PVLL A+++ +L +WDPR+ D++HLMP
Sbjct: 251 YPNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMP 310
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
IITPA+P NS++NV+ ST I+ +E G EIC+ + E W+ LF+ FF YK
Sbjct: 311 IITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDI--TEGKATWEDLFKEVKFFSRYK 368
Query: 329 NYLRID----ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 372
+Y+ I I +L W+ ++ESR+R L +ER+ ++L H
Sbjct: 369 HYIGISDHGYIHRRRGIEL--WR-FLESRIRLLVQSLERNQ-DILIAH 412
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 243/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M +S ++ GIT P+S A PT +L L L+ N +E E R++ L L +V
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 SFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 243/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M +S ++ GIT P+S A PT +L L L+ N +E E R++ L L +V
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPTVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 SFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 448
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 449 GGVRPSRP 456
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 243/418 (58%), Gaps = 44/418 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M +S ++ GIT P+S A PT +L L L+ N +E E R++ L L +V
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRKQTLHLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPTVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 358 SFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 448
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 449 GGVRPSRP 456
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 234/391 (59%), Gaps = 40/391 (10%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
GIT P+S G T + L + L+ +E+++E +R +VL L +
Sbjct: 3 FGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEV 62
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
VHGPG+DIDTL V P+H TRE DFF +L
Sbjct: 63 SKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE-DFFTVFDSLLR 121
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
E E+ E+ PVPDA VP++K KFSG+SI L+ ARL +P L +S ++L+N DE+ +
Sbjct: 122 ERKELDEIAPVPDAFVPIIKIKFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDEKDL 181
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVARICQ
Sbjct: 182 RALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQ 241
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+ITP
Sbjct: 242 LYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITP 301
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK YL
Sbjct: 302 AYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKFYLE 359
Query: 333 IDISAENADDLR-NWKGWVESRLRQLTLKIE 362
I +D+ W G VES++R L +K+E
Sbjct: 360 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 390
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 214/323 (66%), Gaps = 8/323 (2%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFS 116
V+GPG+DIDTL VGP+H TRE DFF + L ++ + +L VPDA VP+MK + S
Sbjct: 113 VYGPGSDIDTLVVGPKHVTRE-DFFADFPSTLEQLAPKDSIEKLTSVPDAFVPIMKLELS 171
Query: 117 GVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRT 176
G+SIDL++ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR
Sbjct: 172 GISIDLIFARLVVHSVPLNLDLKNKELLRGLDERELRCVNGTRVTDEILELVPQQKTFRL 231
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWP 236
LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP A S+++ +FFR+ QW WP
Sbjct: 232 ALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQATGSVIIGKFFRIMNQWNWP 291
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +++ E +
Sbjct: 292 QPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISLSTKAVILRELK 351
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLR 355
RG +I + + + + W LF +FF YK YL I S+ + W G VES+LR
Sbjct: 352 RGGDIVDKIFMGQ--LRWSDLFAKHSFFSKDYKYYLSITASSTTKEAQSVWSGLVESKLR 409
Query: 356 QLTLKIERHTYNMLQCHPHPGDF 378
L L ++R + ++ HP P F
Sbjct: 410 HLVLALDRKS-SIEVAHPFPKGF 431
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/409 (41%), Positives = 244/409 (59%), Gaps = 51/409 (12%)
Query: 2 GSSNG-----QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGR 56
G+S+G ++ G+T IS + PTD ++ L + L+ +N +ES EE+ R +VL R
Sbjct: 678 GASSGLSQPPRQWGVTPAISHSMPTDQEIKVNNDLIEELKAMNSFESAEESQKRVDVLKR 737
Query: 57 LDQVH------------------------------------GPGADIDTLCVGPRHATRE 80
L ++ GPG+DIDTL V P+ TRE
Sbjct: 738 LQRITEDFVKQVYTSKNQNELATNSAGGKVFTYGSYRLGVVGPGSDIDTLVVAPKLVTRE 797
Query: 81 EDFFGELHQMLTEM-----PEVTE-LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE 134
DFF +L + P++ E L PVPDA VP++KF SG+SIDL++ RL + +P
Sbjct: 798 -DFFKFYPPLLKALNKPNEPQIIEELAPVPDAFVPIIKFVMSGISIDLIFCRLGVTQVPA 856
Query: 135 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNV 194
D+ + ++L+ DE+ +RSLNG RVTD+IL LVP F+ LR ++ WAK + +Y NV
Sbjct: 857 DMSLEDKNLLRGLDEKELRSLNGTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNV 916
Query: 195 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVW 254
GF GG+ WA+LVARICQLYP+AV +++VS+FFR+ QW WP PVLL IE+G L ++VW
Sbjct: 917 YGFPGGVAWAMLVARICQLYPSAVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVW 976
Query: 255 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 314
+PR P DK HLMPIITPAYP M S++N++ ST ++ E + +I + + + +W
Sbjct: 977 NPRLYPSDKNHLMPIITPAYPSMCSTHNITPSTKAAILGEMAKAADIVDRIITGKG--NW 1034
Query: 315 DTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
LFE TFF + YK YL ++ SA+ + W G VES++R L +K+E
Sbjct: 1035 KQLFERHTFFTKDYKYYLAVNASAKEQEASVKWSGLVESKIRHLVMKLE 1083
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 241/415 (58%), Gaps = 47/415 (11%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M S+ + LGIT P+S A PTD + + L + L+ N YES + R E L L
Sbjct: 1 MASTGEKPLGITAPLSTALPTDSENQASSALIEELKRQNNYESVVDTQKRTEALKALQAI 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V GPG+DIDTL VGP+H TR+ DFF
Sbjct: 61 TEEFIKQVSKAQGLPDSVANSASGKIFTYGSFRLGVFGPGSDIDTLVVGPKHVTRD-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQ 140
+L M +T+L PV D+ VP++KF+++G+SIDL+++R++ L IP+ L +
Sbjct: 120 KYFPDLLVTMSPPGAITDLTPVVDSFVPIIKFEYAGISIDLIFSRIAVLNQIPQSLTLQD 179
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
++L+ DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 SNLLRGLDEADLRSLNGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGG 239
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 260
+ WA+LVAR+CQLYP A S +V +FFR+ +W+WP PVLL I G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPKATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYK 299
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
D +HLMPIITPAYP M +++N++ ST I+ E +RG I + + + + W LF
Sbjct: 300 HDSFHLMPIITPAYPSMCATHNITRSTKEIIQRELKRGGNITDQIMSGK--LQWKDLFAK 357
Query: 321 FTFF-EAYKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERHTYNMLQCHP 373
TFF E YK YL + ISA + +N W G VES++R L L +E H L HP
Sbjct: 358 HTFFTEGYKYYLSV-ISASTTREAQNIWGGLVESKIRLLVLSLEGHDSIAL-AHP 410
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 241/444 (54%), Gaps = 73/444 (16%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
+ G+++PISL PTD+DL R + + L+ NLYE++ RE VLG +++
Sbjct: 94 KYGVSDPISLNYPTDEDLKRANDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVE 153
Query: 60 --------------VHG--------------PGADIDTLCVGPRHATREEDFFGELHQML 91
+HG P +DID + + P++ TRE FF E + L
Sbjct: 154 ISISQGINEEDAKYIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 212
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQ 150
+ V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 213 QQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 272
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A++
Sbjct: 273 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKV 332
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYH 265
CQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H
Sbjct: 333 CQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLH 392
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------- 313
+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 393 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVT 452
Query: 314 ----------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 357
W + +P F YK++L I I A N +WKGW+ES++R L
Sbjct: 453 PVSTPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLL 512
Query: 358 TLKIERHTYNMLQCHPHPGDFSDK 381
K+E T N L+ P+P + K
Sbjct: 513 FKKLE--TINELRIRPYPKFYVYK 534
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/458 (38%), Positives = 249/458 (54%), Gaps = 75/458 (16%)
Query: 8 RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------- 59
+ G+++PISL PT++DL + + + L+ NLYE++ RE VLG +++
Sbjct: 89 KYGVSDPISLNYPTEEDLRKGNDVVELLKSYNLYETEHALKKRERVLGMINKLFHEFVVE 148
Query: 60 --------------VHG--------------PGADIDTLCVGPRHATREEDFFGELHQML 91
+HG P +DID + + P++ TRE FF E + L
Sbjct: 149 ISISQGINEEDAKHIHGNLYTFGSYRLGVITPNSDIDCIFLAPQNITRE-IFFNEFYLKL 207
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQ 150
+ V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 208 QQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEV 267
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+I
Sbjct: 268 TVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKI 327
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYH 265
CQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H
Sbjct: 328 CQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLH 387
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD----------- 313
+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 388 VMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVT 447
Query: 314 ----------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 357
W + +P F YK++L I I A + +WKGW+ES++R L
Sbjct: 448 PVSAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLL 507
Query: 358 TLKIERHTYNMLQCHPHPGDF-SDKSKPLYC-SYFMGL 393
K+E T N L+ P+P + K K YC S+F+ L
Sbjct: 508 FKKLE--TINELKIRPYPKFYVYQKDKFDYCSSFFIAL 543
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/419 (40%), Positives = 243/419 (57%), Gaps = 45/419 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M ++ ++LGIT P+S A PTD + T L + + NL+ES+ + R VL L
Sbjct: 1 MATAAPRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSI 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V+GPG+DIDTL V P++ +REE +F
Sbjct: 61 TEEFVKRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YF 119
Query: 85 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQ 140
+L EM PE + +L PVP+A VP++KF++SG+SIDL++AR+ + I L ++
Sbjct: 120 ELFPDLLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLND 179
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
D++L DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 DNLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGG 239
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 260
+ WA+LVAR+CQLYP A S ++ +FFR+ +QW+WP PVLL AI+ G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYK 299
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
D YHLMPIITP+YP M +++N++ ST I+ E RG I + + +A W LF
Sbjct: 300 GDGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKA--SWKDLFVK 357
Query: 321 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL + ++ + W G VES++R L +E H L HP F
Sbjct: 358 HTFFTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPFNKGF 415
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 271/505 (53%), Gaps = 68/505 (13%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHG-------- 62
I PIS AGPT DL + + ++L S+E+ RE+ L L+ V G
Sbjct: 18 IWAPISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGV 77
Query: 63 ------------------------------PGADIDTLCVGPRHATREEDFFGELHQMLT 92
P +DID LCV PRH TRE FFG L L
Sbjct: 78 QQGMTAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQ 136
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+M EV + PVPDA+ P++K V IDLL+ARL+L D+ D +L+N D+++V
Sbjct: 137 QMDEVETVTPVPDAYAPIIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSV 196
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
R +NG RV D IL+LVP FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+CQ
Sbjct: 197 RCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQ 256
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPRRNPKDKYHLMP 268
++PN LV RFF + ++W W NPV LC I E G + +VW+P++ D+ HLMP
Sbjct: 257 MFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMP 316
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPA+P MNS+YNV+ +T RI+M E +R H++ + K E VDW+ L F FF Y
Sbjct: 317 VITPAFPSMNSTYNVTETTKRIIMGEIERAHKL--TLPKKE-QVDWELLCHKFPFFCNYL 373
Query: 329 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDFSD 380
Y++I +SA ++ R +KG+VESRLR L +E +T + P P G+ +
Sbjct: 374 YYVQIRVSALSSTAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPYVVDGEVRE 432
Query: 381 KSKPLYCSYFMGLQ--RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP---GMQISVA 435
S C +++GL + + G+ D+R F ++ ++ + ++ +A
Sbjct: 433 NS----CCWYIGLDFPKLSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFEMDIA 488
Query: 436 HVTRRNLPNFVFPGGVRPSRPSKGT 460
+++R LP + V+ PS T
Sbjct: 489 YISRPKLPEHL----VKDQSPSTDT 509
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 247/422 (58%), Gaps = 44/422 (10%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
S N G+T PISLA PT D L K L+ +ES+ R +VL L +
Sbjct: 2 SMNTPTYGVTPPISLANPTPKDNELNDLLIKELKLRGSFESEAATRKRVKVLNTLQKLTE 61
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDFFGE 86
V+GP +DID L V PR+ TRE DFF E
Sbjct: 62 TFVYNVSRSKNMSEAMARDAGGKLFTFGSYRLGVYGPSSDIDALVVFPRYITRE-DFFTE 120
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
++L E PE+ E++ V +A VP++K +F G+SIDL++A+L + IP+DL ++ ++L+N
Sbjct: 121 FEKLLRERPELEEINSVREAFVPIIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKN 180
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE+ +R+LNG RVTD+IL LVPK F+ LR ++ WA++R +Y+NV GF GG+ WA+L
Sbjct: 181 IDEKDLRALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAML 240
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYPNAV S +V +FF++Y+QW WP PVLL IE+G L ++VW+P+ D+ H
Sbjct: 241 VARICQLYPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHR 300
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MP+ITPAYP M +++N++ ST +I++DEFQRG I + + +W L + FF
Sbjct: 301 MPVITPAYPSMCATHNITASTQKIILDEFQRGTTIMHGIL--DGTKNWLDLLQRHDFFHR 358
Query: 327 YKNYLRIDISAENA-DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
YK YL + + ++ ++ + G ES+LR L K+E + HP+ F +
Sbjct: 359 YKFYLCVVAATKSTYEEHLKYSGMFESKLRLLVQKLE-MVPGVELAHPYVKSFENG---Y 414
Query: 386 YC 387
YC
Sbjct: 415 YC 416
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/509 (35%), Positives = 278/509 (54%), Gaps = 59/509 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+++PISLA PT DL T L + L+ +E +EE R +VL L+
Sbjct: 16 GVSQPISLAQPTPKDLSLTCSLLQELKSFGSFEEKEETTKRIQVLQFLNATVKKWIQSIS 75
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
VH G DID++ + PR TR DFF L +L
Sbjct: 76 ATRLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRS-DFFTSLKDILLRN 134
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VRS
Sbjct: 135 PNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRS 194
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
LNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR CQLY
Sbjct: 195 LNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLY 254
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIIT 271
PNA PS LV + F V++ W +P+P++LC + D RN D++HLMPIIT
Sbjct: 255 PNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWGRNHADRFHLMPIIT 314
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK+++
Sbjct: 315 PAFPEQNSTHNVSRSTMEVIKKEMADALVICN--DVFEGKCDWKHLFEELNFYSQYKHFV 372
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYF 390
+ + A+ + ++ G++ESRLR L ER+ + +P + K++ L +F
Sbjct: 373 VLKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKAQSL---WF 429
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVF 447
+GL+ + V + D+ + FK +++ + PG +++ +++V R L ++
Sbjct: 430 IGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIPGFEDVELDISYVKRSQLIKYLP 484
Query: 448 PGGVRPSR--PSKGTWDSRR----ALERK 470
++ R +KG+ D + L+RK
Sbjct: 485 AAELKKGRFHVAKGSSDDNKENAGVLKRK 513
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 284/556 (51%), Gaps = 112/556 (20%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYES----QEEAVSREEVLGRLDQ 59
S Q G+T PIS++ PT+++ + L + LR +ES Q+ +R VL L +
Sbjct: 2 SGEQVYGVTPPISVSLPTENEKRISESLIEELRRQKTFESPSDTQKSLSNRHTVLESLQK 61
Query: 60 -------------------------------------VHGPGADIDTLCVGPRHATREED 82
V GPG+DIDTL V P++ TRE D
Sbjct: 62 ITDEFVRKVAREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-D 120
Query: 83 FFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDI 138
+F ++L EM +T+L V DA VP++KF++SG+SIDL+++R+ + P+ D+
Sbjct: 121 YFKYFPELLAEMAPKDSITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDL 180
Query: 139 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 198
+L+ DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY N+ GF
Sbjct: 181 KDSGLLRGLDEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFP 240
Query: 199 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 258
GG+ WA+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+
Sbjct: 241 GGVAWAMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKV 300
Query: 259 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 318
D +HLMPIITPAYP M +++N++ S++ I+ E QRG EI E + + W+ LF
Sbjct: 301 YKGDSFHLMPIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQ--SWNDLF 358
Query: 319 EPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
TFF YK Y+ + +++ D + W G++ES++R L K+E H + L HP
Sbjct: 359 VKHTFFTTGYKYYISVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKG 417
Query: 378 FSDK---------------------------------------------------SKPLY 386
+S + S+
Sbjct: 418 YSRRHLCKDETQIEQVQEGSLDFVVSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEVFT 477
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 442
++++GL+ ++G + D+ V EFK + + KP + I V HV NL
Sbjct: 478 TTHYIGLELEEG-----AKSLDLSYQVDEFKVLCTAWQKYQDELKPLVSIGVQHVRNFNL 532
Query: 443 PNFVFPGGVRPSRPSK 458
P+ VF G +P K
Sbjct: 533 PDDVF--GADEKKPQK 546
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/419 (40%), Positives = 244/419 (58%), Gaps = 45/419 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M ++ ++LGIT P+S A PTD + T L + + NL+ES+ + R VL L
Sbjct: 1 MATAAPRQLGITPPLSTALPTDAEKQATDALIEEMTKENLFESRADTEKRSAVLASLQSI 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V+GPG+DIDTL V P++ +REE +F
Sbjct: 61 TEEFVKRVCRKQNLPENIVNNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YF 119
Query: 85 GELHQMLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQ 140
+L EM PE + +L PVP+A VP++KF++SG+SIDL++AR+ + I L ++
Sbjct: 120 ELFPDLLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLND 179
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
D++L DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 DNLLTGLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGG 239
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 260
+ WA+LVAR+CQLYP A S ++ +FFR+ +QW+WP PVLL AI+ G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYK 299
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
D YHLMPIITP+YP M +++N++ ST I+ E RG I + + +A W LF
Sbjct: 300 GDGYHLMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKA--SWKDLFVK 357
Query: 321 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL + ++ + W G VES++R L +E H ++ HP F
Sbjct: 358 HTFFTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHE-SIALAHPFNKGF 415
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 237/393 (60%), Gaps = 25/393 (6%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLR---------DVNLYESQEEAVSREEVLGRLDQ 59
LG+T ISLA +D +T +L+K L +N + +E + +L
Sbjct: 243 LGMTSAISLAETKPEDHTKTVELQKALELNHRMEILPKLNTLVKHAQCFHLKEHVAKLGG 302
Query: 60 -----------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV 108
V+ GA+ID LCV PR+ R D+FG ++L + PEVTE V +A V
Sbjct: 303 KIYTFGSYRLGVNHKGANIDALCVAPRNIERL-DYFGSFFELLKKQPEVTECRAVEEALV 361
Query: 109 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 168
PV+K F G+ IDLL+ARL+L IP + D+ D +L+N D + VRSLNGCR TD+ILRLV
Sbjct: 362 PVVKMNFDGIKIDLLFARLALKEIPNNFDLGDDMLLKNLDPKLVRSLNGCRATDEILRLV 421
Query: 169 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 228
P I NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR CQL PN V + V +FF
Sbjct: 422 PNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL-PNVVAATQVHKFFL 480
Query: 229 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 288
V+ +W+WP PV L + +LG QVWD R N +D++HLMPIITPAYP NS+++VS+ST
Sbjct: 481 VFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITPAYPQPNSTFHVSSSTR 540
Query: 289 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 348
++M++EF G +I + + +A WD LFE +FF Y+ + + +++ N DD W
Sbjct: 541 KVMLNEFNSGMQITDEIMLGKA--GWDKLFEAPSFFFKYRYVIVLLVTSNNTDDHLEWCE 598
Query: 349 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
VES++R L +ER + L H +P F +
Sbjct: 599 MVESKIRYLIQNLERILHINL-AHVNPKCFEQQ 630
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/495 (37%), Positives = 263/495 (53%), Gaps = 64/495 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG T +S PT+ DL T++LE L +N++E+QEE R E L RL +
Sbjct: 12 LGETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQK 71
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+ GADID+L V PR TREE FF + +L
Sbjct: 72 ALEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLA 130
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNADEQ 150
E P V +LH V DA VPV+K KF GV IDLL+A++ IPE+ + +++ +++N DE+
Sbjct: 131 ENPNVEDLHAVVDAFVPVVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDER 190
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
VRS+NG RVT+ IL LV +F+ L+ +R WAKRR VYSN GFLGG++WA+LV+RI
Sbjct: 191 DVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRI 250
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPI 269
CQLYP A PSM+V FF +++QW WP PV L E SL L VWDPR NP D+YHLMPI
Sbjct: 251 CQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPI 310
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFTFFEAY 327
+TP+YP NS+YNV S I+ E ++G + A M K W LFE FF+ Y
Sbjct: 311 LTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKR----SWSNLFEAAFFFQ-Y 365
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQCHPHPGDFSDKSKP 384
++Y+ + + G VESRLR L E + Y + C + +D
Sbjct: 366 RHYVVVIVVGNVKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAYGKGPNDDDAN 425
Query: 385 LYCSYFMGLQRKQGV-----------PVGEGEQFDIRLT--VKEFKQAVSMYTLRKPGMQ 431
+F+G++ + GE ++ L+ + F++++ L +
Sbjct: 426 FVRKWFIGMEFDRNTNSLTSTVHNSNTAGEKPTLNVDLSENISSFEKSIER-GLSSEDLS 484
Query: 432 ISVAHVTRRNLPNFV 446
++V +V + L F+
Sbjct: 485 VTVKYVKKSQLAQFI 499
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 233/397 (58%), Gaps = 43/397 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M +S ++ GIT P+S A PT +L L L+ N +E+ E R++ L L +V
Sbjct: 1 MATSQSRQWGITPPLSSALPTPAELTENDALIAELKLQNNFETPSETEKRKQTLHLLQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL V P+H RE DFF
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDASGGKIFTYGSYRLGVYGPGSDIDTLVVAPKHVMRE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+
Sbjct: 120 AHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+
Sbjct: 240 AWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W LF
Sbjct: 300 DRFHLMPIITPAYPSMCATHNVSMSTKSVILRELRRGGDMVDKIFVGQR--RWSDLFARH 357
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQL 357
+FF A YK YL I+ ++ + W G VES+LR L
Sbjct: 358 SFFSADYKYYLSINSTSTTKEAQAIWSGLVESKLRHL 394
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 448
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 470 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 528
Query: 449 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 484
G VRP+RP K + E+ VS A DG++
Sbjct: 529 GEVRPTRPKKKV---VKKAEQSVSQKRTIDAVDGQE 561
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/428 (40%), Positives = 237/428 (55%), Gaps = 46/428 (10%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGP----- 63
LG T +S PT+ D T++LE L +N++E+QEE R E L RL ++
Sbjct: 16 LGETGALSFKKPTEQDFRDTQELEASLAQLNIFETQEEISQRREALVRLQEISNAWIRQK 75
Query: 64 -------------------------------GADIDTLCVGPRHATREEDFFGELHQMLT 92
GADID+L V PR TREE FF + +L
Sbjct: 76 ALEQNLPAHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLA 134
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNADEQ 150
E V +LH V DA VPV+K KF GV IDLL+A++ IPE+ + +++ +++N DE+
Sbjct: 135 ENSNVEDLHAVVDAFVPVLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNMDER 194
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
VRS+NG RVT+ IL LV +F+ L+ +R WAKRR VYSN GFLGG++WA+LV+RI
Sbjct: 195 DVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILVSRI 254
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPI 269
CQLYP A PSM+V FF +++QW WP PV L E SL L VWDPR NP D+YHLMPI
Sbjct: 255 CQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPI 314
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
+TP+YP NS+YNV S I+ E ++G + A ++ W LFE FF+ Y++
Sbjct: 315 LTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKG--SWSNLFEAAFFFQ-YRH 371
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML---QCHPHPGDFSDKSKPLY 386
Y+ + + G VESRLR L E + Y + CH + SD
Sbjct: 372 YVVVIVVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAYGKGPSDDDANFV 431
Query: 387 CSYFMGLQ 394
+F+G++
Sbjct: 432 RKWFIGME 439
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 268/488 (54%), Gaps = 53/488 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+++PISLA PT DL T L + L+ V +E++EE R +VL L+
Sbjct: 17 GVSQPISLAQPTPKDLSLTCSLLQELKSVGSFEAKEETTKRIQVLQFLNATVKKWIQGIS 76
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
VH G DID++ + PR +R DFF L +L
Sbjct: 77 SARLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRT-DFFTSLKDILIRN 135
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
P V L+ V A VP+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+++VRS
Sbjct: 136 PNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQESVRS 195
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
LNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR CQLY
Sbjct: 196 LNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVARTCQLY 255
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIIT 271
PNA PS LV + F V++ W +P+P++LC + D RN D++HLMPIIT
Sbjct: 256 PNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWGRNHADRFHLMPIIT 315
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PA+P NS++NVS ST+ ++ E IC + + DW LFE F+ YK+++
Sbjct: 316 PAFPEQNSTHNVSRSTMEVIKKEMADALVICNDI--FDGKCDWKFLFEEVNFYSQYKHFV 373
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYF 390
+ + A+ + ++ G++ESR RQL ER+ M +P + K++ L +F
Sbjct: 374 VMKLDAKKEETENSYGGFLESRFRQLIGAFERNRGIKMAHLNPKKCQPTSKAQSL---WF 430
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVF 447
+GL+ V + D+ + FK +++ + G +++ +++ R L ++
Sbjct: 431 IGLEFDDVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYAKRSQLIKYMP 485
Query: 448 PGGVRPSR 455
P ++ R
Sbjct: 486 PAELKKGR 493
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/363 (43%), Positives = 221/363 (60%), Gaps = 39/363 (10%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
N Q G+T PISL PT D L K L+ YES+ + R EVL L +
Sbjct: 2 NNQTYGVTPPISLTDPTSKDKELNDLLIKELKVRGSYESEAATLKRVEVLTTLQKLTEDF 61
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
V+GP +DID L V PRH TRE DFF
Sbjct: 62 VYEVSLRKNMTQGMAKDAGGKIFTFGSYRLGVYGPSSDIDALVVVPRHVTRE-DFFTVFE 120
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 148
++L PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N D
Sbjct: 121 KILRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNID 180
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVA
Sbjct: 181 EKDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVA 240
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 268
RICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP
Sbjct: 241 RICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMP 300
Query: 269 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 328
+ITPAYP M +++N++ ST +I+M+EF RG EI + + W L E +FF YK
Sbjct: 301 VITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYK 358
Query: 329 NYL 331
YL
Sbjct: 359 FYL 361
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/482 (39%), Positives = 267/482 (55%), Gaps = 68/482 (14%)
Query: 15 ISLAGPTDDDLMRTRKLEKYLRDVNLYE--------------------------SQEEAV 48
IS P DL +++LEK+L+ + LYE + EE +
Sbjct: 15 ISDREPESKDLAASQELEKFLKAMGLYENAEGSKRRKAVLLMLLKLVKEWSGKIAAEEGL 74
Query: 49 SREEV-------LGRLD-QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 100
+EEV G VH P ADID LC+ PRH +RE FF Q+L E+ EL
Sbjct: 75 DKEEVSPATLKTFGSYHLGVHTPDADIDVLCLAPRHCSRE-SFFTSFCQILRNHTEIDEL 133
Query: 101 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 160
PVP+A+ PV+KFK GVSID+L+ L +P ++ L++ D+ VRSLNG RV
Sbjct: 134 FPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDDAGVRSLNGVRV 193
Query: 161 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
+ IL LVP Q FRTTLR ++ WA+RRG+YSNV G LGG+NWA+LVA + Q YPNA PS
Sbjct: 194 AELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAFVVQRYPNASPS 253
Query: 221 MLVSRFFRVYTQWRWPNPVLLCAIE--------EGS-LGLQ-VWDPRRNPKDKYHLMPII 270
+L+++FF +Y +W+WPN V L ++ EG L VW+P NP+DK HLMPII
Sbjct: 254 VLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPII 313
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP MNSSYNV +R++ +E RG I + + A +W LFE FF ++ Y
Sbjct: 314 TPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIA--NWANLFERSDFFWRFELY 371
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIER----HTYNMLQCHPHPGDFSDKSKPLY 386
+++DISA +A D R W GW+ESR+R + +++ Y + P+P + ++ +
Sbjct: 372 VQVDISARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVNPLPNPYLTNAETGAVG 431
Query: 387 CSYFMGL--------QRKQGVPVGEGEQFDIRLTVKEFKQAVSMY---TLRKPGMQISVA 435
S+F+GL + GVPV D+ ++F V ++ R+ GM++ V
Sbjct: 432 NSFFIGLGFPEVANGRSPSGVPV------DLTPAWRDFMMRVELWGDRRRRREGMEVDVK 485
Query: 436 HV 437
V
Sbjct: 486 AV 487
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 241/412 (58%), Gaps = 46/412 (11%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----- 58
++ Q G+T PIS+ PT+ +L ++ L + L+ +ES E REEVL +
Sbjct: 2 ASDQAFGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDA 61
Query: 59 --------------------------------QVHGPGADIDTLCVGPRHATREEDFFGE 86
V+GPG+DIDTL V PR+ TRE D+F
Sbjct: 62 FVRRVAEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKY 120
Query: 87 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 142
+L M +T++ V DA VP++KF++ G+SIDL+++R+ + P+ D+
Sbjct: 121 FPDLLVSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSG 180
Query: 143 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 202
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 203 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 262
WA+LVAR+CQLYP A P+++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+HLMP+ITPAYP M +++N++ S++ I+ E +R +I E++ W LF +
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMR--PWSDLFAKHS 358
Query: 323 FFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 373
FF A YK Y+ + +A+ + W G+VES++R L K+E+H L HP
Sbjct: 359 FFTAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHP 409
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 269/488 (55%), Gaps = 53/488 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+++PISLA PT D+ T L + L+ +E++EE R +VL L+
Sbjct: 17 GVSQPISLAQPTPKDISLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNATVKKWIQGIS 76
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
VH G DID++ + PR +R DFF L +L
Sbjct: 77 ASRLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVSRA-DFFTSLKDILIRN 135
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+++VRS
Sbjct: 136 PNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQESVRS 195
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
LNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WA+LVAR CQLY
Sbjct: 196 LNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARACQLY 255
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE---GSLGLQVWDPRRNPKDKYHLMPIIT 271
PNA PS LV + F V++ W +P+P++LC L L RN D++HLMPIIT
Sbjct: 256 PNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHLMPIIT 315
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK+++
Sbjct: 316 PAFPEQNSTHNVSRSTMEVIKKEMTDALTICN--DVFEGKCDWKHLFEEVNFYSQYKHFV 373
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYF 390
+ + A+ + ++ G++ESRLR L ER+ + +P + KS+ L +F
Sbjct: 374 VMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL---WF 430
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVF 447
+GL+ + V + D+ + FK +++ + G +++ +++V R +L ++
Sbjct: 431 IGLEFDEVV-----KNMDLTREINNFKWNLNVQAKQIAGFEDVELDISYVKRSHLIKYLP 485
Query: 448 PGGVRPSR 455
++ R
Sbjct: 486 AAELKKGR 493
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 270/488 (55%), Gaps = 53/488 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+++PISLA PT DL T L + L+ +E++EE R +VL L+
Sbjct: 15 GVSQPISLANPTPQDLSLTCSLLQELKSFGSFEAKEETTKRIQVLQFLNVTVKKWIQGIS 74
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
VH G DID++ + PR TR DFF L +L
Sbjct: 75 AARLPNGKFFEAGGQVVSFGSYRLGVHSSGGDIDSVVIAPRQVTRT-DFFTSLKDILIRN 133
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
P V L+ V A VP+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+++VRS
Sbjct: 134 PNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQKSVRS 193
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
LNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WA+LVAR CQLY
Sbjct: 194 LNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVARTCQLY 253
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCA-IEEGS--LGLQVWDPRRNPKDKYHLMPIIT 271
PNA PS LV + F V++ W +P+P++LC E S L L RN D++HLMPIIT
Sbjct: 254 PNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWGRNHADRFHLMPIIT 313
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PA+P NS++NVS ST+ ++ E IC + E DW LFE F+ YK+++
Sbjct: 314 PAFPEQNSTHNVSRSTMEVIKKEMADALVICNDI--FEGKSDWKFLFEEVNFYSQYKHFV 371
Query: 332 RIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPLYCSYF 390
+ + A+ + ++ G++ESRLR L ER+ + +P + K++ + +F
Sbjct: 372 VMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKAQSI---WF 428
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLPNFVF 447
+GL+ + V + D+ + FK +++ + G +++ +++V R L ++
Sbjct: 429 IGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYVKRSQLIKYLP 483
Query: 448 PGGVRPSR 455
++ R
Sbjct: 484 AAELKKGR 491
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 237/399 (59%), Gaps = 43/399 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
Q G+T PIS+ PT+ +L ++ L + L+ +ES E REEVL +
Sbjct: 5 QAYGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQTICDAFVR 64
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREE--DFFGEL 87
V+GPG+DIDTL V P++ TRE+ FF +L
Sbjct: 65 RVAQEKEPKNEVLIRNARGKVFTYGSYRLGVYGPGSDIDTLIVAPKYVTREDYFKFFPDL 124
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAR-LSLWVIPEDLDISQDSILQN 146
+ +T++ V DA VP++KF++SG+SIDL+++R + + P+ D+ +L+
Sbjct: 125 LLSMAPKDAITDMAVVTDAFVPIIKFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLRG 184
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+L
Sbjct: 185 LDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAML 244
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L +++W+P+ D YHL
Sbjct: 245 VARVCQLYPKATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHL 304
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MP+ITPAYP M +++N++ S++ I+ E +R +I E++ + W LF TFF A
Sbjct: 305 MPVITPAYPSMCATFNITRSSMAIINRELKRALQISESIMVGKR--PWSDLFVKHTFFTA 362
Query: 327 -YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
YK Y+ + +A+ + W G+VES++R L K+E+H
Sbjct: 363 GYKYYISVTSAAKTKEAHTIWSGYVESKVRMLVQKLEQH 401
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 165/420 (39%), Positives = 243/420 (57%), Gaps = 46/420 (10%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----- 58
S Q G+T PIS++ PT+ + + L + LR +ES + +R VL L
Sbjct: 2 SGEQVYGVTPPISVSLPTEIEKRVSESLIEELRRQKTFESPSDTQNRFTVLESLQIITDE 61
Query: 59 --------------------------------QVHGPGADIDTLCVGPRHATREEDFFGE 86
V GPG+DIDTL V P++ TRE D+F
Sbjct: 62 FVKKVAREKEPKNDILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKY 120
Query: 87 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 142
+LTEM +T++ V DA VP++KF++SG+SIDL+++R+ + P+ D+
Sbjct: 121 FPDLLTEMAPKDSITDITAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSG 180
Query: 143 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 202
L+ DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY N+ GF GG+
Sbjct: 181 FLRGLDEAELRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVA 240
Query: 203 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 262
WA+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGD 300
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+HLMPIITPAYP M +++N++ S++ I+ E QRG EI E + + W LF T
Sbjct: 301 SFHLMPIITPAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQ--PWSDLFVKHT 358
Query: 323 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
FF YK Y+ + +++ + + W G++ES++R L K+E+H + L HP+ +S +
Sbjct: 359 FFTTGYKYYISVVSASKAKEPHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGYSRR 417
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/405 (40%), Positives = 237/405 (58%), Gaps = 42/405 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + + LG+T P++ A PT D +L L+ N YE+ EE R VL L +
Sbjct: 1 MATPYAKALGVTPPLTSAAPTAADEAANDELISELKRQNNYETPEETAKRSAVLKSLQAI 60
Query: 61 H------------------------------------GPGADIDTLCVGPRHATREE--D 82
GPG+DIDTL V P++ T+ E
Sbjct: 61 TEEFVRQVTRAQGSAESAVKSAGGKIETFGSFKLGVIGPGSDIDTLVVVPKNITKAEFFQ 120
Query: 83 FFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQD 141
FF E+ + T +TEL PDA+VP++ FKFSGV IDLL+ R+ SL IP+DL ++
Sbjct: 121 FFPEIMEKSTPPGTITELMSKPDAYVPILTFKFSGVDIDLLFGRIASLNQIPKDLKMTDH 180
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ +EQ RSLNG RV D++L LVP+ + FRT LR ++ W+ RRG+ N+ GF GG+
Sbjct: 181 DLLRGLEEQEARSLNGVRVADEMLTLVPQTKVFRTALRTIKLWSARRGIVGNIYGFPGGV 240
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S +V +FF++ +W+WP PVLL IE G+L LQVW+P+ N
Sbjct: 241 AWAILVARVCQLYPKATGSTIVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHT 300
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+ H+MPIITPAYP M +++NV+ ST+ ++ E +RG EI + + +A W LFE
Sbjct: 301 DRRHIMPIITPAYPSMCTTHNVTRSTMAVIHKELKRGGEIADRVMMGKA--KWKDLFEKH 358
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 365
TFF +YK YL I ++ +++ W G+VES++R L K+ T
Sbjct: 359 TFFTSSYKYYLCIITASTSSEAQTKWAGFVESKVRLLVGKLTEQT 403
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 241/412 (58%), Gaps = 46/412 (11%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----- 58
++ Q G+T PIS+ PT+ +L ++ L + L+ +ES E REEVL +
Sbjct: 2 ASDQAFGVTPPISVQLPTEAELRQSDALLEELKRQKTFESPAETAKREEVLASIQIICDA 61
Query: 59 --------------------------------QVHGPGADIDTLCVGPRHATREEDFFGE 86
V+GPG+DIDTL V PR+ TRE D+F
Sbjct: 62 FVRRVAEEKEPKNEVLVRNARGRVFTYGSYRLGVYGPGSDIDTLIVAPRYVTRE-DYFKY 120
Query: 87 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 142
+L M +T++ V DA VP++KF++ G+SIDL+++R+ + P+ D+
Sbjct: 121 FPDLLVSMAPKDAITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSG 180
Query: 143 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 202
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 203 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 262
WA+LVAR+CQLYP A P+++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGD 300
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+HLMP+ITPAYP M +++N++ S++ I+ E +R +I E++ W LF +
Sbjct: 301 TFHLMPVITPAYPSMCATFNITRSSMTIINRELKRALQISESIMVGMR--PWSDLFAKHS 358
Query: 323 FFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 373
FF A YK Y+ + +A+ + W G+VES++R L K+E+H L HP
Sbjct: 359 FFTAGYKYYISVISAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHP 409
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 238/403 (59%), Gaps = 45/403 (11%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ Q G+T PIS+ PT+ + + L + LR +ES + R +VL L
Sbjct: 2 SSDQVFGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRYKVLESLQAICDE 61
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDF--F 84
V GPG+DIDTL V P++ TRE+ F F
Sbjct: 62 FVKRVAREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTREDYFKYF 121
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-I 143
+L + + +T+L V DA VP++KF++SG+SIDL+++R+ + D QDS +
Sbjct: 122 PDLLEAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGL 181
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY N+ GF GG+ W
Sbjct: 182 LRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAW 241
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 242 AMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDS 301
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
+HLMP+ITPAYP M +++N+S S++ I+ E +RG EI E++ + W LF TF
Sbjct: 302 FHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKR--PWSDLFVKHTF 359
Query: 324 FEA-YKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERH 364
F + YK Y+ + ISA + + N W G+VES++R L K+E+H
Sbjct: 360 FTSDYKYYISV-ISASKSKEAHNVWSGYVESKVRMLVQKLEQH 401
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/400 (39%), Positives = 236/400 (59%), Gaps = 45/400 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
Q G+T PIS+ PT+ + + L + LR +ES + R VL L +
Sbjct: 5 QNYGVTPPISVTLPTEAENRASDALLEELRRQKTFESPSDTEKRHAVLKSLQEICNEFVR 64
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
V+GPG+DIDTL V P++ TRE D+F
Sbjct: 65 KVAREREPKNDILIKNARGKVFTYGSFRLGVYGPGSDIDTLIVAPKYVTRE-DYFNYFPD 123
Query: 90 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQ 145
+L M +T+L V DA VP++KF++SG+SIDL+++R+ I D D +DS +L+
Sbjct: 124 LLVSMAPPGAITDLTVVKDAFVPIIKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLR 183
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY+N+ GF GG+ WA+
Sbjct: 184 GLDEAELRSLNGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAM 243
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR+CQLYP A S++V++FF V QWRWP PVLL I+ G L ++VW+P+ D +H
Sbjct: 244 LVARVCQLYPKATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFH 303
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
LMP+ITPAYP M +++N++ S++ I+ E +RG EI E + + W LF TFF
Sbjct: 304 LMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEQIMVGKR--PWSDLFVKHTFFT 361
Query: 326 A-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ Y+ Y+ + ++++ + + W G+VES++R L K+E+H
Sbjct: 362 SGYRYYISVISASKDKEAHKIWSGYVESKVRMLVQKLEQH 401
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 238/402 (59%), Gaps = 49/402 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSR----EEVLGRLDQ----- 59
LG+T PISLA PT+ + + L LR N +ES + R E VL L +
Sbjct: 8 LGVTPPISLALPTEAENHAMQTLIDELRRQNTFESPTDTEKRQALSETVLEHLARICDEF 67
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDFFGEL 87
V+GPG+DIDTL V P++ TR D+F
Sbjct: 68 VKRVARKREEGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA-DYFEIF 126
Query: 88 HQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSI 143
+L EM +T++ V DA VP++KF+FSG+SIDL+++R++ L +P+D ++ +
Sbjct: 127 PDLLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGL 186
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ W
Sbjct: 187 LRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAW 246
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+ D+
Sbjct: 247 AMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQ 306
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
+HLMP+ITPAYP M ++YN++ S + ++ E QRG +I +A+ + W LF TF
Sbjct: 307 FHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRS--PWSDLFVKHTF 364
Query: 324 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
F + YK Y+ + S+ + + + W G+VES++R L +E+H
Sbjct: 365 FTQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQH 406
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 238/403 (59%), Gaps = 45/403 (11%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---- 59
S+ Q G+T PIS+ PT+ + + L + LR +ES + R +VL L
Sbjct: 2 SSDQVFGVTPPISVGLPTEAEKRASDALIEELRRQKTFESPSDTQKRFKVLESLQAICDE 61
Query: 60 ---------------------------------VHGPGADIDTLCVGPRHATREEDF--F 84
V GPG+DIDTL V P++ TR++ F F
Sbjct: 62 FVKRVAREKEPKNDVLIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRDDYFKYF 121
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSI 143
+L + + +T+L V DA VP++KF++SG+SIDL+++R+ + P+ D+ +
Sbjct: 122 PDLLEAMAPKGAITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGL 181
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY N+ GF GG+ W
Sbjct: 182 LRGLDEAELRSLNGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAW 241
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D
Sbjct: 242 AMLVARVCQLYPKAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDS 301
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
+HLMP+ITPAYP M +++N+S S++ I+ E +RG EI E++ + W LF TF
Sbjct: 302 FHLMPVITPAYPSMCATFNISRSSMAIINRELRRGLEISESIMVGKQ--PWSDLFVKHTF 359
Query: 324 FEA-YKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIERH 364
F + YK Y+ + ISA + + N W G+VES++R L K+E+H
Sbjct: 360 FTSDYKYYISV-ISASKSKEAHNVWSGYVESKVRMLVQKLEQH 401
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/405 (38%), Positives = 242/405 (59%), Gaps = 45/405 (11%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
+ G LG+T PIS A PT+ + + + + L+ +ES E R +VL +L
Sbjct: 2 AGQGHPLGVTPPISTALPTEAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICD 61
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDF-- 83
V+GPG+DIDTL V P++ TR++ F
Sbjct: 62 EFVKQVARKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEI 121
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQ 140
F L Q +T +T+L V DA VP++KF+F G+SIDL+++R+ SL +P+D ++
Sbjct: 122 FPGLLQKMTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLAD 181
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
++L+ DE+ +RSLNG RVTD+I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG
Sbjct: 182 SNLLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGG 241
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 260
+ WA+LVAR+CQLYP A S++V++FF + +W WP PVLL A+EEG L ++VW+P+
Sbjct: 242 VAWAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYR 301
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
D++HLMPIITPAYP M +++N++ S + ++ E QRG EI + + ++ W LF
Sbjct: 302 GDQFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKR--PWGDLFIK 359
Query: 321 FTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
TFF + YK Y+ + ++ + + W G+VES++R L +E+H
Sbjct: 360 HTFFTSGYKYYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQH 404
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 241/408 (59%), Gaps = 49/408 (12%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYES----QEEAVSREEVLGRLD 58
+S + LG+T PIS A PT+ + + L LR N +ES Q+ + E+VL L
Sbjct: 2 ASEERPLGVTPPISSALPTEAENHAMQTLIDELRRQNTFESPADTQKRQMPSEKVLEHLA 61
Query: 59 Q-------------------------------------VHGPGADIDTLCVGPRHATREE 81
+ V+GPG+DIDTL V P++ TR
Sbjct: 62 RICDEFVKRVAREREKGNDALIRDARGKIFTYGSYRLGVYGPGSDIDTLVVAPKYVTRA- 120
Query: 82 DFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLD 137
D+F +L EM +T++ V DA VP++KF+FSG+SIDL+++R++ L +P+D +
Sbjct: 121 DYFEIFPDLLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFN 180
Query: 138 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF 197
+ +L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF
Sbjct: 181 VQDSGLLRGLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGF 240
Query: 198 LGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
GG+ WA+LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+
Sbjct: 241 PGGVAWAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPK 300
Query: 258 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 317
D++HLMP+ITPAYP M ++YN++ S + ++ E QRG +I +A+ W L
Sbjct: 301 LYKGDQFHLMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRN--PWSDL 358
Query: 318 FEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
F TFF + YK Y+ + S+ + + + W G+VES++R L +E+H
Sbjct: 359 FVKHTFFTQGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQH 406
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 215/336 (63%), Gaps = 10/336 (2%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH GADID LCV PRH R FF +L EVT++ V DA VPV+K F G+
Sbjct: 73 VHTKGADIDALCVAPRHVDRTS-FFASFVDLLKSQTEVTQITVVEDAFVPVIKMVFDGIE 131
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+D+L+ARL L IPE+LD+ +L+N D + VRSLNGCRVTD IL LVP +FRT LR
Sbjct: 132 MDMLFARLGLQNIPENLDLLDLELLRNLDMKCVRSLNGCRVTDAILSLVPNADSFRTALR 191
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
++ WAKRRG+YSN G+LGG++WA+LVAR CQLYPNAV + +V +FF V+ QW W PV
Sbjct: 192 FIKLWAKRRGIYSNALGYLGGVSWAMLVARTCQLYPNAVAATIVQKFFLVFNQWNWQQPV 251
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
LL + E L L W P N D+ LM IITP YP NS++NVS ST I+++E +RG
Sbjct: 252 LLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTFNVSKSTKTILLEEIERGL 310
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+IC + A W FEP FF YK+Y+ + A + D+ + W G VES+LR+L L
Sbjct: 311 KICNEIFLRNA--KWTDAFEPADFFGRYKHYIVLTAKATSEDNYKEWIGLVESKLRKLVL 368
Query: 360 KIERHTY-NMLQCHP--HPGD---FSDKSKPLYCSY 389
+ER+ Y +++ +P +PGD ++ K L+C +
Sbjct: 369 TLERNEYFDIVHINPKSYPGDPQRYAFWFKLLHCIF 404
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 234/405 (57%), Gaps = 47/405 (11%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M + +R G+T+PIS A PTD +L L LR N +E+ EE R L L +
Sbjct: 1 MAGQSNRRWGVTDPISRAPPTDAELALDATLLDELRSQNTFEAPEETEKRGAALQTLQKA 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V+GPG+DIDTL + P+H TR+ DFF
Sbjct: 61 VEEFVRHVGQVKGLAPSVIDNAGGKICTFGSYRLGVYGPGSDIDTLVLAPKHVTRD-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+L + + + PVPDA P++K F G+ IDL++ARL++ +P DLD+ +
Sbjct: 120 AHFINVLERVAPSGAIEKFSPVPDAFTPIIKMDFMGIDIDLIFARLAIASVPLDLDLKDN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
S+L+ DE +RS+NG RVTD++L LVP+ + FR R ++ WA+RR +Y+N+ GF GGI
Sbjct: 180 SLLRGLDETDLRSVNGTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGI 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA++VARICQLYP A ++++ RFF + + W WP P++L IE+G L ++VW+P+ P
Sbjct: 240 AWAMMVARICQLYPMACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM--EKNEADVDWDTLFE 319
DK HLMPIITPAYP M +++N++ ST +++ E R +I + EK W LF+
Sbjct: 300 DKRHLMPIITPAYPSMCATHNITHSTQKVIKRELLRASQITSDILSEKRR----WRDLFD 355
Query: 320 PFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 363
TFF + +K YL I ++ + + NW VES++R+L IE+
Sbjct: 356 RHTFFTQDFKYYLSIVAASHDKEAQDNWSSSVESKVRKLVGLIEQ 400
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 241/435 (55%), Gaps = 61/435 (14%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + ++ GIT P+S A PT +L L L+ N +E+ E R++ L L +V
Sbjct: 1 MAAPQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEAPSETEKRKQTLHLLQRV 60
Query: 61 ------------------------------------HGP-----------------GADI 67
+GP G+DI
Sbjct: 61 TIEFIKVVSKEKGLSQAAIDVSGGKIFTYGSYRLGVYGPAVMNGDISLMYSLRQFAGSDI 120
Query: 68 DTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLY 124
DTL V P+H RE DFF +L + + ++ PVPDA VP++K + SG+SIDL++
Sbjct: 121 DTLVVAPKHVMRE-DFFAHFPTVLEKFAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIF 179
Query: 125 ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 184
ARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ W
Sbjct: 180 ARLIVPSVPPNLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLW 239
Query: 185 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 244
A+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL I
Sbjct: 240 AQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHI 299
Query: 245 EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 304
E+G L ++VW+P+ D++HLMPIITPAYP M +++N+S ST +++ E +RG ++ +
Sbjct: 300 EDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNISMSTKAVILRELRRGGDMVDN 359
Query: 305 MEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 363
+ + W LF +FF YK YL I+ ++ + W G VES+LR L ++R
Sbjct: 360 IFVGQR--RWSDLFARHSFFSGDYKYYLSINSTSTTKEAQAIWSGLVESKLRHLVGALDR 417
Query: 364 HTYNMLQCHPHPGDF 378
+ ++ HP P F
Sbjct: 418 KS-SIEIAHPFPKGF 431
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/403 (39%), Positives = 233/403 (57%), Gaps = 43/403 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M + + G++ PIS P DL + L + L+ N +ES +E R +VL RL +
Sbjct: 1 MAENGATQYGVSPPISTDPPKPQDLALSESLMEELKAQNNFESPDETKKRGDVLARLQKL 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V+GPG+DIDTL V PRH TRE DFF
Sbjct: 61 LHQLVQIVGKQKKLPNEILKESGGKIFTYGSYRLGVYGPGSDIDTLMVAPRHVTRE-DFF 119
Query: 85 GELHQML---TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L T E+TEL PVP VP++K + GVSIDL+++ L +P++L+++ +
Sbjct: 120 EHMPTLLRQATTPDELTELTPVPGITVPIIKLELCGVSIDLIFSALDRASVPKNLELTDN 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
++L+ E +R +NG RVTD+IL+LVP+ + FR LR ++ WA+RR +Y NV GF GG+
Sbjct: 180 NLLRGLTEVDLRCVNGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
+A++VARICQLYP A M+V +FF V + W+WP + L E+G L + WDP N
Sbjct: 240 AYAMMVARICQLYPRAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRW 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DK HLMP+ITPAYPCMNS+ ++ ST +++ E +RGH+I E + + W LF
Sbjct: 300 DKMHLMPVITPAYPCMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKK--QWKDLFVKQ 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 363
FF EAY++Y+ + + + + + W G V+SRLR+L IE+
Sbjct: 358 KFFSEAYQHYICVITAGKTKEAQQAWSGLVQSRLRRLIQGIEQ 400
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 296/579 (51%), Gaps = 110/579 (18%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----- 58
++ Q G+T PIS+ PT+ + + L+ LR +ES E R +VL L
Sbjct: 2 ASEQVYGVTPPISVNLPTEAEKRASDALKDELRRQKTFESPSETDKRWKVLDSLQLICNE 61
Query: 59 --------------------------------QVHGPGADIDTLCVGPRHATREEDFFGE 86
V GPG+DIDTL V P++ TRE D+F
Sbjct: 62 FVRKVATEKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-DYFKY 120
Query: 87 LHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDS 142
+L M +T+L V DA VP++KF++S +SIDL+++R+ + P+ D+ S
Sbjct: 121 FPDLLVAMAPAGAITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFADLKDSS 180
Query: 143 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 202
+L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+
Sbjct: 181 LLRGLDEAELRSLNGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGVA 240
Query: 203 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 262
WA+LVAR+CQLYP A S++V++FF V QWRWP PVLL I G L ++VW+P+ D
Sbjct: 241 WAMLVARVCQLYPKAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGD 300
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+HLMP+ITPAYP M +++N++ S++ I+ E +RG EI E + + W LF T
Sbjct: 301 SFHLMPVITPAYPSMCATFNITRSSMTIIQRELRRGLEISEEIMVGKR--PWSDLFVKHT 358
Query: 323 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH------- 374
FF + Y+ Y+ + +++N + + W G+VES++R L K+E+H+ ++ HP
Sbjct: 359 FFTQGYRYYISVVSASKNKEAHKVWSGYVESKVRMLVQKLEQHS-SIALAHPFNKGYDRR 417
Query: 375 -------------------------PGDFSDKSKP----------------LY-CSYFMG 392
G S++ P +Y ++++G
Sbjct: 418 HLCKNDHEIEQVQEGSLEFVIKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIG 477
Query: 393 LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVFP 448
++ ++G + D+ V EFK + + +P + + V HV NLP+ VF
Sbjct: 478 IELEEG-----AKSLDLSYQVDEFKVLCTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFE 532
Query: 449 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQ 487
G ++P K + S + +R + P A KR+Q
Sbjct: 533 AG--ETKPQKKSAKSLASKKRGPTEDNTPPA----KRQQ 565
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 284/529 (53%), Gaps = 77/529 (14%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
G LG+T PIS A PTD + + + + L+ +ES E R +VL +L
Sbjct: 4 QGHPLGVTPPISTALPTDAEHATNKTMLEELKQQKTFESPAETQKRHQVLEQLQTICDEF 63
Query: 60 --------------------------------VHGPGADIDTLCVGPRHATREEDF--FG 85
V+GPG+DIDTL V P++ TR++ F F
Sbjct: 64 VKQVARKREEGSEALIKDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTRDDYFEIFP 123
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDS 142
L Q +T +T+L V DA VP++KF+F G+SIDL+++R+ SL +P+D ++ +
Sbjct: 124 GLLQKMTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSN 183
Query: 143 ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 202
+L+ DE+ +RSLNG RVTD+I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG+
Sbjct: 184 LLRGLDERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVA 243
Query: 203 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 262
WA+LVAR+CQLYP A S++V++FF + +W WP PVLL A+EEG L ++VW+P+ D
Sbjct: 244 WAMLVARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGD 303
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
++HLMPIITPAYP M +++N++ S + ++ E QRG EI + + ++ W LF T
Sbjct: 304 QFHLMPIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKR--PWGDLFIKHT 361
Query: 323 FFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLK---------------IERHTY 366
FF + YK Y+ + ++ + + W G+VES++++ +L+ + T
Sbjct: 362 FFTSGYKYYISVVTTSTTKEAHKIWSGYVESKVQEGSLQYLAGQETTETPNPEIVVAKTE 421
Query: 367 NMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQ--------------GVPVGEGEQ-FDIRL 411
L P D + ++ G++ + G+ +GEG + D+
Sbjct: 422 GGLALDGLPLDGTTETGTEANGTGEGVEEEVQTWPTNVFTTTHYIGLELGEGAKSLDLSY 481
Query: 412 TVKEFKQAVSMYTLRKPGM-QISVAHVTRRNLPNFVF-PGGVRPSRPSK 458
V FKQ + + ++V HV NLP+ +F PG +P + K
Sbjct: 482 QVDSFKQLCGQWEKYSAKLNHLTVQHVRNFNLPDDLFEPGEKKPQKQQK 530
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/407 (39%), Positives = 238/407 (58%), Gaps = 49/407 (12%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV- 60
G S ++ G++ PIS A P D +T +L + L+ N YE +E R L L++V
Sbjct: 5 GQSAPKQWGVSPPISTALPEPLDNEKTAELIEELKRENNYEPMDETKKRMSTLALLNRVT 64
Query: 61 -----------------------------------HGPGADIDTLCVGPRHATREEDFFG 85
GPG+DIDTL V PRH TRE DFF
Sbjct: 65 QEFVREVSRRQRLPPSQIDQFGGKIYPYGSYRLGVFGPGSDIDTLAVAPRHVTRE-DFFE 123
Query: 86 ELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQD 141
+L M VT L VPD+ VP++K +G+ IDL++A + SL IP+DL ++ +
Sbjct: 124 YFPAVLERMAGPGAVTSLTAVPDSFVPIIKLVLNGIEIDLIFASIASLQTIPKDLTLNDN 183
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
++L D+ TVR++ G RVTD+IL LVP+ + FRT LR ++ WA+RR +Y+N+ G+ GG+
Sbjct: 184 NLLMGLDQPTVRAVTGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGV 243
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDP 256
WA+LVAR+CQLYP+AV + +V +FF V + W WP PV+L IE+ + G +VW+P
Sbjct: 244 AWAMLVARVCQLYPHAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNP 303
Query: 257 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDT 316
P D+ ++MPIITPA+P M ++YN+S S +++++E +RG EI + +A W
Sbjct: 304 AIYPGDRKNIMPIITPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKA--KWSD 361
Query: 317 LFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
LF+ TFF A +K YL I S+ NAD + W G VES++R +++E
Sbjct: 362 LFKKHTFFTADHKYYLSITASSLNADSAKAWAGLVESKVRIFVMQLE 408
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 237/407 (58%), Gaps = 49/407 (12%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD------------ 58
+T ISLA P +D +T +L+K L N++E + + R E+L +L+
Sbjct: 1 MTSAISLAEPKTEDHTKTVELQKSLEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNVSI 60
Query: 59 ------------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
V+ G +ID LCV PR+ R+ D+FG ++L +
Sbjct: 61 SKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQ-DYFGSFFELLKKQ 119
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
PE V +A VPV+K KF G+ IDLL+ARL+L IP++ D+ +D +L+N D + VRS
Sbjct: 120 PEY---RAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVRS 176
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
LNGCR TD+ILR VP I NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR CQL
Sbjct: 177 LNGCRATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL- 235
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 274
PN V + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLM IITPAY
Sbjct: 236 PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAY 295
Query: 275 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 334
P NS+++VS+ST ++M++EF +I + + +A WD LFE +FF Y+ ++ +
Sbjct: 296 PQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKA--GWDKLFEAPSFFFKYRYFIVLL 353
Query: 335 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
+++ N DD ES++R L +ER + L H +P F +
Sbjct: 354 VTSNNTDDHLE-----ESKIRYLIQNLERILHINL-AHVNPKCFEQQ 394
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 284/578 (49%), Gaps = 126/578 (21%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEE-------------- 46
M +S ++ GIT P+S A PT +L L L+ N +E E
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRFVWLFKNAFA 60
Query: 47 -----------------------------AVSREEVLGRLDQVHGPGADIDTLCVGPRHA 77
VS+E+ L + G+DIDTL V P+H
Sbjct: 61 CLGNTNSSGLFFRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASGGSDIDTLVVAPKHV 120
Query: 78 TREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE 134
RE DFF +L + + ++ PVPDA VP++K + SG+SIDL++ARL + +P
Sbjct: 121 MRE-DFFAHFPAVLEKHAPKDAIEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPP 179
Query: 135 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNV 194
+LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+
Sbjct: 180 NLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNI 239
Query: 195 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVW 254
GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW
Sbjct: 240 VGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVW 299
Query: 255 DPRRN-------PK------------DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEF 295
+P+ PK D++HLMPIITPAYP M +++NVS ST +++ E
Sbjct: 300 NPKVGSQLCFFIPKALTDFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILREL 359
Query: 296 QRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRL 354
+RG ++ + + + W LF +FF A YK YL I+ ++ + + W G VES+L
Sbjct: 360 RRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKL 417
Query: 355 RQLTLKIERHTYNMLQCHPHPGDF-----------------------SDKSK-------- 383
R L ++R + ++ HP P F +D +K
Sbjct: 418 RHLVGALDRKS-SIEIAHPFPKGFERVHICKTDEEVDAVKAGSMKYQADDTKTATTDETN 476
Query: 384 -PLYCSYFMGLQRKQGV-----PVGEGEQF-----------------DIRLTVKEFKQAV 420
P + + G+ P GE + DI FK
Sbjct: 477 DPTHIAAAENANENVGIAEAEKPTGENKYTLYTTTYYIGLELKPLAPDISSDTHMFKNTC 536
Query: 421 SMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRP 456
+ + +PG+ ++++HV +LP+ VF PG RP+RP
Sbjct: 537 TSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEARPTRP 574
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 45/419 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M ++ ++LGIT P+S A PTD + T L + L N +ES+ + R VL L
Sbjct: 1 MATAAPKQLGITPPLSTALPTDAEKQATDALIEELTRENNFESRADTDKRTAVLASLQNI 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V+GPG+DIDTL V P++ +REE +F
Sbjct: 61 TEEFVKRVCRKQNLPENYINNAGGRIFTYGSFRLGVYGPGSDIDTLVVVPKNVSREE-YF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQ 140
+L EM + +L PV +A+VP++KF++SG+SIDL++AR+ +L +P L +
Sbjct: 120 EMFPDLLVEMAPKGAIEDLTPVQEAYVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKD 179
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
D++L D+ +RS+NG RVTD I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG
Sbjct: 180 DNLLTGLDDAGLRSVNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGG 239
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 260
+ WA+LVAR+CQLYP A S ++ +FFR+ +W+WP PVLL I+ G L ++VW+PR
Sbjct: 240 VAWAMLVARVCQLYPQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYK 299
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
D +HLMPIITP+YP M +++NV+ ST I+ E RG I + + +A W LF+
Sbjct: 300 SDSFHLMPIITPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKA--PWKDLFQK 357
Query: 321 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL + ++ + W G VES++R L +E H L HP F
Sbjct: 358 HTFFTKNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIAL-AHPFNKGF 415
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 141/328 (42%), Positives = 215/328 (65%), Gaps = 13/328 (3%)
Query: 59 QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 118
+V+ +DIDT+C+ P R++ FFG+L +L EVTEL P+ +A VP++K KFSG+
Sbjct: 1197 KVNSHDSDIDTVCLVPNFVDRDQHFFGDLVNILQNRKEVTELFPIKEASVPIIKMKFSGI 1256
Query: 119 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL--VPKIQNFRT 176
DL +AR E++D++ + +L + DE++ RS NGCRV + ++R + +NF+
Sbjct: 1257 LFDLSFARAPPQYNGENIDLTSNQMLLSMDERSYRSFNGCRVAEWLIRKDNIQNYENFKI 1316
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWP 236
TL+C++ WA RG+YSN+ G+L GI W +LVA+ICQLYPN P+ L+ RFF +Y+ W+W
Sbjct: 1317 TLKCIKLWATNRGIYSNIIGYLSGIGWTILVAKICQLYPNYPPNQLIERFFFLYSHWKWH 1376
Query: 237 N-PVLLCAIEEG----SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 291
+ PV + I+E L W P +D+ +M IITP +PCMN+++NVS +TLRI+
Sbjct: 1377 DLPVYVEHIQEDVANTKLNADQWRPEF--RDRNSMM-IITPCFPCMNTAHNVSPTTLRII 1433
Query: 292 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 351
++ Q G+ I ++KNE + LF+PF FF+ YK++L+I+I A N +D WKG VE
Sbjct: 1434 QEQLQYGNRIINKIKKNEK--TFSDLFKPFNFFKRYKHFLQINIVATNKNDHIVWKGHVE 1491
Query: 352 SRLRQLTLKIERHTYN-MLQCHPHPGDF 378
SRLR+LT E+ +N ++Q HP+P F
Sbjct: 1492 SRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 284/579 (49%), Gaps = 127/579 (21%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEA------------- 47
M +S ++ GIT P+S A PT +L L L+ N +E E
Sbjct: 1 MAASQSRQWGITPPLSSALPTPSELAENDALIAELKLQNNFEPPSETEKRFVWLIKMLLT 60
Query: 48 ----------VSREEVLGRLDQV--------------------HGPGADIDTLCVGPRHA 77
V R++ L L +V G+DIDTL V P+H
Sbjct: 61 CLGNTNSSGLVFRKQTLHLLQRVTIEFIKVVSKEKGLSQAAIDASGGSDIDTLVVAPKHV 120
Query: 78 TREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE 134
RE DFF +L + + ++ PVPDA VP++K + G+SIDL++ARL + +P
Sbjct: 121 MRE-DFFAHFPAILEKHAPKDAIEKMTPVPDAFVPIIKIEIFGISIDLIFARLIVSSVPP 179
Query: 135 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNV 194
+LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+
Sbjct: 180 NLDLKNKDLLRGLDEREIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNI 239
Query: 195 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVW 254
GF GG+ WA+LVAR+CQLYP A S++V +FFR+ QW WP PVLL IE+G L ++VW
Sbjct: 240 VGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVW 299
Query: 255 DPRRNPK--------------------DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
+P+ + D++HLMPIITPAYP M +++NVS ST +++ E
Sbjct: 300 NPKVGSQLCFFFIPRALADFSFQIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRE 359
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESR 353
+RG ++ + + + W LF +FF A YK YL I+ ++ + + W G VES+
Sbjct: 360 LRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESK 417
Query: 354 LRQLTLKIERHTYNMLQCHPHPGDF-----------------------SDKSK------- 383
LR L ++R + ++ HP P F +D +K
Sbjct: 418 LRHLVGALDRKS-SIEIAHPFPKGFERVHICKTDEEVDAVKAGSMKYQADDTKTATTDET 476
Query: 384 --PLYCSYFMGLQRKQGV-----PVGEGEQF-----------------DIRLTVKEFKQA 419
P + + G+ P GE + DI FK
Sbjct: 477 NDPTHIAAAENANENVGIAEAEKPTGENKYTLYTTTYYIGLELKPLAPDISSDTHMFKNT 536
Query: 420 VSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRP 456
+ + +PG+ ++++HV +LP+ VF PG VRP+RP
Sbjct: 537 CTSWAQYQPGVNDLNISHVRNYDLPDDVFQPGEVRPTRP 575
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 237/402 (58%), Gaps = 47/402 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++LG+T P+S++ P++ +L T L LR N +ES E R VL L
Sbjct: 5 RQLGVTPPVSVSLPSEFELQATDALLAELRAQNSFESPLETEKRHRVLASLQTIADAFVK 64
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
V GPG+DIDTL VGPR+ TRE D+F
Sbjct: 65 VVAKEREPHNAVLIKDARAKVFAYGSLRLGVWGPGSDIDTLVVGPRYVTRE-DYFQHFPD 123
Query: 90 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 143
+L +M +T+L V +A VP++KF++ G+SIDL+++R+ +L +P D + D++
Sbjct: 124 LLVKMAPPGAITDLTVVEEAFVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNL 183
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE+ +RS+NG RVTD+IL LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAW 243
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR+CQLYP A S++V++FF + QW WP PVLL I +G L ++VW+PR D
Sbjct: 244 AMLVARVCQLYPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDS 303
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
YHLMP+ITPAYP M +++NV+ S++ ++ E Q EI + + W +F TF
Sbjct: 304 YHLMPVITPAYPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTK--PWKDMFAKHTF 361
Query: 324 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
F + +K Y+++ ++ + + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYMQVISASRDKEAHKIWSGFVESKVRMLVQSLERH 403
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 285/560 (50%), Gaps = 106/560 (18%)
Query: 4 SNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSRE----EVLGRLDQ 59
++ Q G+T PIS+ PT+ + + L + LR +ES + R +VL L +
Sbjct: 2 ASEQVYGVTPPISVTLPTEAEKRASDALIEELRRQKTFESPSDTDKRHSFRYKVLASLQE 61
Query: 60 -------------------------------------VHGPGADIDTLCVGPRHATREED 82
V GPG+DIDTL V P++ TRE D
Sbjct: 62 ICNEFVRKVAREKEPKNEILIKNARGKVFTYGSFRLGVFGPGSDIDTLIVAPKYVTRE-D 120
Query: 83 FFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 139
+F +L M +T+L V DA VP++KF++S +SIDL+++R+ I D D
Sbjct: 121 YFKHFPDLLVSMAPPGSITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFDNL 180
Query: 140 QDS-ILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 198
+DS +L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF
Sbjct: 181 KDSSLLRGLDEAELRSLNGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFP 240
Query: 199 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 258
GG+ WA+LVAR+CQLYP A S++V++FF V QWRWP PVLL I G L ++VW+P+
Sbjct: 241 GGVAWAMLVARVCQLYPKAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKV 300
Query: 259 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 318
D +HLMP+ITPAYP M +++N++ S++ ++ E +RG EI E + + W LF
Sbjct: 301 YKGDSFHLMPVITPAYPSMCATFNITRSSMSVIQRELRRGLEISEQIMVGKR--PWSDLF 358
Query: 319 EPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-------- 369
TFF + Y+ Y+ + ++++ + + W G+VES++R L K+E+H L
Sbjct: 359 VKHTFFTSGYRYYISVVSASKDKEAHKVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGY 418
Query: 370 ---------------------------------QCHPHP------GDFSDKSKPLYCSYF 390
+ P P + S + +++
Sbjct: 419 DRRHRCKNDHEIEQVQEGSLEFMIKEESGSQSGEIEPKPEVKDGSAETSSPVEVFTTTHY 478
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFV 446
+GL+ ++G + D+ V EFK + + +P + + V HV NLP+ V
Sbjct: 479 IGLELEEG-----AKSLDLSYQVDEFKVLCTQWKKYQEELQPSVSLGVQHVRNFNLPDDV 533
Query: 447 F-PGGVRPSRPSKGTWDSRR 465
F PG +P + S + +++
Sbjct: 534 FDPGEEKPQKKSAKSMANKK 553
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 242/402 (60%), Gaps = 47/402 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++LG+T P+S+ PT+++ T L LR N +E E R VL L +
Sbjct: 5 RQLGVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVK 64
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
V GPG+DIDTL V PR+ TRE D+F
Sbjct: 65 TVARKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPG 123
Query: 90 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 143
+L EM +T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE+ +RS+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR+CQLYP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
YHLMPIITPAYP M +++N++ S+ ++ E + ++ + + + W LF+ TF
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTF 361
Query: 324 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
F + +K Y+++ ++++ + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERH 403
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 242/402 (60%), Gaps = 47/402 (11%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++LG+T P+S+ PT+++ T L LR N +E E R VL L +
Sbjct: 5 RQLGVTPPVSVHLPTEEEKQATDSLLAELRAQNSFEGPVETEKRFAVLRSLQEIADAFVK 64
Query: 60 ------------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQ 89
V GPG+DIDTL V PR+ TRE D+F
Sbjct: 65 TVARKKEPDNAVLIKDARGKVFAYGSLRLGVWGPGSDIDTLVVAPRYVTRE-DYFEHFPG 123
Query: 90 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 143
+L EM +T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ DE+ +RS+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR+CQLYP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
YHLMPIITPAYP M +++N++ S+ ++ E + ++ + + + W LF+ TF
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTF 361
Query: 324 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
F + +K Y+++ ++++ + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERH 403
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 263/469 (56%), Gaps = 45/469 (9%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----------- 58
G+T P +L T D L +++ L +L++ + +ES+E+A +RE LGRL
Sbjct: 11 GVTGPATLDSSTKDSLEKSKILINFLKENDFFESEEDAKTRERALGRLSFLLKKFVRQQS 70
Query: 59 ---------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 97
VH GADID LCV PRH +R+ DFF + L E V
Sbjct: 71 LSKGETKDCGGIICTFGSYRLGVHDKGADIDALCVVPRHISRK-DFFNIFYNQLLEDSNV 129
Query: 98 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 157
TEL V DA+VPV+K + + IDL AR++L V+ +LD+ D++L+ DE+ + S+NG
Sbjct: 130 TELSKVEDAYVPVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKTMDEKCILSING 189
Query: 158 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 217
RVTD +L L+P + F LR ++FWAKRR +Y N G+ GG+ +++ VARICQLYPN
Sbjct: 190 SRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSISVARICQLYPNK 249
Query: 218 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 277
+V ++F Y+ W WP P+LL I + L+VWD ++ P D+YH MPIITPAYP M
Sbjct: 250 SSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIITPAYPSM 309
Query: 278 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 337
S++NV ST ++ EF+R EI + + D+ +F+ FF YK Y+ I + A
Sbjct: 310 CSTHNVFQSTFDLICREFRRSTEI---INNSINSTDFLQIFDNTDFFRKYKLYINIKVKA 366
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ-RK 396
+ + +++W G+VES++R L K E +++ P P F K C++F+G++ K
Sbjct: 367 DK-ESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPF---IKDETCNFFIGIEILK 421
Query: 397 QGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
G + ++ + +KEF ++ + + M+I ++ ++++ F
Sbjct: 422 TG---SQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF 467
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/291 (49%), Positives = 194/291 (66%), Gaps = 29/291 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPGAD 66
+ GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +
Sbjct: 17 KHYGITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL------ 70
Query: 67 IDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAR 126
+ + +V+E V DA VPV+KF+F G+ IDL++AR
Sbjct: 71 -----------------------VKEWISDVSESKAVEDAFVPVIKFEFDGIEIDLVFAR 107
Query: 127 LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAK 186
L++ I ++LD+ DS L++ D + +RSLNGCRVTD+IL LVP + FR TLR ++ WAK
Sbjct: 108 LAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAK 167
Query: 187 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE 246
RRG+YSN+ GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE
Sbjct: 168 RRGIYSNMLGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEE 227
Query: 247 GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
+L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++
Sbjct: 228 SNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 278
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 239/410 (58%), Gaps = 53/410 (12%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEE----AVSREEVLGRLD 58
+S + G+T PIS A PT+ + L + L+ N +E+++ SR +V+ L
Sbjct: 2 ASEERAYGVTPPISTALPTELENQAKEALIEELKKQNTFETRQSNPFLGESRYQVINHLQ 61
Query: 59 Q-------------------------------------VHGPGADIDTLCVGPRHATREE 81
Q V+GPG+DIDTL V P++ TR
Sbjct: 62 QICDEFVKRVARKREEGNEALIRDARGQIFTYGSFRLGVYGPGSDIDTLVVAPKYVTRS- 120
Query: 82 DFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLD 137
D+F +L EM +T++ V DA VP++KF+F G+SIDL+++R++ L +P++ +
Sbjct: 121 DYFEIFPGLLKEMAPSDAITDMAVVEDAFVPIIKFEFFGISIDLIFSRIAMLKQLPKEFN 180
Query: 138 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF 197
+ +L+ DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF
Sbjct: 181 VQDSGLLRGLDEAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGF 240
Query: 198 LGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
GG+ WA+LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+
Sbjct: 241 PGGVAWAMLVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPK 300
Query: 258 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWD 315
D++HLMP+ITPAYP M ++YN++ S + ++ E RG EI + + KN W
Sbjct: 301 VYKGDQFHLMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKN----PWS 356
Query: 316 TLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
LF TFF + YK Y+ + ++ + + + W G+VES++R L +E+H
Sbjct: 357 DLFVKHTFFTQGYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQH 406
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 236/404 (58%), Gaps = 47/404 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A PT+ + + L + LR +ES+ E +R++V+ +L++
Sbjct: 7 GVTPPISTALPTEAEKRMHQALHEELRAQGTFESRAETEARKKVIAQLEKITTAFVKKAT 66
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
V+GPG+DIDTL V P+H T E+ +F +L EM
Sbjct: 67 AETQNSFMVREAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKHVTTEQ-YFRLFPPLLVEM 125
Query: 95 P---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPED--LDISQDSILQNAD 148
+T+L PVPDA VP++KF+FSG+SIDL++ + L IPED +++ +++L+
Sbjct: 126 APPGAITDLTPVPDAFVPIIKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTLLRGLS 185
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E VRSLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ WA+LVA
Sbjct: 186 ENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVA 245
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE--GSLGLQVWDPRRNPKDKYHL 266
R+CQLYP A +++V++FF + +W WP PVLL IE VW+P+ D+ H
Sbjct: 246 RVCQLYPKATSAVVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNHR 305
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYP M +++N++ S+ ++M E ++G ++ E + A W LF TFF +
Sbjct: 306 MPIITPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRA--PWKALFTKHTFFTS 363
Query: 327 -YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 369
++ YL + S+ D W G++ESR+R L KIE H +L
Sbjct: 364 DFRYYLTVISSSRTKDAQNVWSGFIESRVRVLVNKIENHAAIVL 407
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 233/418 (55%), Gaps = 56/418 (13%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL------ 54
M + ++ G T PIS A PT +L L L+ N +E+ E R ++L
Sbjct: 1 MATPQVKQWGTTPPISTALPTPSELAENDNLIAELKRQNNFEAPSETEKRNQMLHLIQRV 60
Query: 55 --------GR---LDQ-------------------VHGPGADIDTLCVGPRHATREEDFF 84
GR L Q V+GPG+DIDTL VGP+H E DFF
Sbjct: 61 TVEFVKTVGRRKGLSQAAIDVSGGKIFAYGSYRLGVYGPGSDIDTLVVGPKHVAIE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ L M + +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+
Sbjct: 120 LDFPPTLERMAPKDSIEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+ G+
Sbjct: 180 ELLRGLDEREIRCVNGTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGV 227
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR+CQLYP A S++V +FFR+ W WP PVLL IE+G L ++VW+P+
Sbjct: 228 AWAMLVARVCQLYPQATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHG 287
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D++HLMPIITPAYP M +++NVS ST +++ E +RG +I E + + + W LF
Sbjct: 288 DRFHLMPIITPAYPSMCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKH 345
Query: 322 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF YK YL I S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 346 TFFSKDYKYYLNITASSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 402
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 232/413 (56%), Gaps = 35/413 (8%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+ PGADIDT+CV PRH TRE DFF L ++ + P+V+ L + A VP++ F + ++
Sbjct: 101 VNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLQHPKVSNLVAIEGAIVPILTFDYEEIN 159
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDL A L IPE+L+I D +L D T +SLNG RVT+ +++L P ++F + LR
Sbjct: 160 IDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLR 219
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
+R WAKRRG+YSN G+LGG+NW +LV I QLYP A PS L+ RFF V W+WP +
Sbjct: 220 IVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAI 279
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
LC + +LGL+VW+ ++Y +MPI+TPAYP MNSS+NVST +L +M +EF+RG
Sbjct: 280 QLCKTHDANLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGL 338
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
I + + ++ +W LFEP FF +++YL +++ E ++ W G+ ESR+R+L
Sbjct: 339 TIVQDV-LSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTEKQEEEAAWCGFCESRMRKL-- 395
Query: 360 KIERHTYNMLQC-----------------------HPHPGDFSDKSKPLYCSYF-MGLQR 395
+E YN C P+ + SK C Y + R
Sbjct: 396 -VESLAYNPALCRLRAYTKKFPLSFVTGGEAPAGEQPNGAALAQPSKFGVCFYVGFDIDR 454
Query: 396 KQGVPVGEGEQFDIRLTVKEFKQA-VSMYTLRKPGMQISVAHVTRRNLPNFVF 447
+Q + I +V+ FK + + R P M + V V + LP VF
Sbjct: 455 RQ----LRSREVSIDNSVEYFKNNDLYRWNKRTPTMDVRVTPVVWKALPESVF 503
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 233/415 (56%), Gaps = 37/415 (8%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+ PGADIDT+CV P+ TRE DFF L ++ + +VT L+ + A VP++ F + ++
Sbjct: 101 VNEPGADIDTICVAPQQITRE-DFFTSLKKIFMQHSKVTNLNAIEGAVVPLLTFDYEEIN 159
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDL A L IPEDL+I D IL D T +SLNG RVT+ +++L P +F + LR
Sbjct: 160 IDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGPRVTELMIKLTPNRDSFISVLR 219
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
+R WAKRRG+YSN G+LGG+NW +LV I QLYP A P+ L+ RFF V W+WP +
Sbjct: 220 IVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPTTLLLRFFMVLANWKWPLAI 279
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
LC E+ LGL+VW+ ++YH+MPI+TPAYP MNSS+NVST +L +M EF+R
Sbjct: 280 QLCKTEDVKLGLEVWNANVG-NNRYHVMPILTPAYPSMNSSFNVSTHSLAVMKQEFERAL 338
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+I + + N V+WD LFE FF ++YL +D+ N +D + W + ESR+R+L
Sbjct: 339 KIVQEI-LNRGAVEWDPLFESSDFFAVQQHYLAVDVYTTNREDEQAWCSFCESRIRKL-- 395
Query: 360 KIERHTYNMLQCH---------------------PHPGDFSDKSKPLY----CSYF-MGL 393
IE Y + CH P D +++ K + C Y +
Sbjct: 396 -IESLAYIPMLCHLRAFPKRFPLSFVGQDQDEKIETPTDRNNEEKETFKYGACFYVGFDI 454
Query: 394 QRKQGVPVGEGEQFDIRLTVKEFKQA-VSMYTLRKPGMQISVAHVTRRNLPNFVF 447
R+Q + I +V FK + + R M + + V +NLP++VF
Sbjct: 455 DRRQ----LRSREVSIDSSVDYFKHNDLYRWNKRSDSMDVRITPVLWKNLPDYVF 505
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 260/492 (52%), Gaps = 45/492 (9%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+ PGADIDT+CV PRH TRE DFF L ++ + P+V++L + A VP++ F + ++
Sbjct: 101 VNEPGADIDTICVAPRHVTRE-DFFSSLKEIFLKHPKVSQLVAIEGAIVPLITFDYEEIN 159
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDL A L IPE+L+I D +L D T +SLNG RVT+ +++L P ++F + LR
Sbjct: 160 IDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLR 219
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
+R WAKRRG+YSN G+LGG+NW +LV I QLYP A PS L+ RFF V W+WP +
Sbjct: 220 IVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAI 279
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
LC + LGL+VW+ ++Y +MPI+TPAYP MNSS+NVST +L +M +EF+RG
Sbjct: 280 QLCKTHDAKLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGL 338
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
I + + ++ +W LFEP FF +++YL +++ E D+ + W + ESR+R+L
Sbjct: 339 TIVQDV-LSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTEKQDEEQAWCSFCESRMRKL-- 395
Query: 360 KIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ-----RKQGVPVGEGEQF------- 407
+E YN C +K SY + + G P + +F
Sbjct: 396 -VESLAYNPALCR-----LRVYTKKFSLSYVTAGEAPVGGQSNGQPPAQPSKFGACFYVG 449
Query: 408 -------------DIRLTVKEFKQA-VSMYTLRKPGMQISVAHVTRRNLPNFVFP--GGV 451
I +V+ FK + + R P M + V V + LP VF GG
Sbjct: 450 FDIDRRQLRSREVSIDSSVEYFKNNDLYRWNKRTPTMDVRVTPVLWKALPESVFEEMGGR 509
Query: 452 RPSRPSKGTW-----DSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 506
+R ++ + + + E + P D+G ++ D++ + A M
Sbjct: 510 TVARAARREFMKKKKEEEKKAEEAAAPSPSPSGDEGTHSQEDGDDLTCSQKAASLATEMA 569
Query: 507 SSSGEFRE-GSP 517
+ G + GSP
Sbjct: 570 NGKGSISQPGSP 581
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 159/408 (38%), Positives = 234/408 (57%), Gaps = 49/408 (12%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--- 59
S+ Q LG+T PIS PTD + +T L K LR +ESQ E R VL L +
Sbjct: 2 SNPEQTLGVTPPISTTLPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITD 61
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
V+GPG+DIDTL V P++ T ++ +F
Sbjct: 62 EFVKRAAQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFD 120
Query: 86 ELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--IS 139
+L EM +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D D ++
Sbjct: 121 IFPNLLVEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLN 180
Query: 140 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 199
+++L+ E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ G
Sbjct: 181 SNNLLRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPG 240
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPR 257
G+ WA+LVAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+
Sbjct: 241 GVAWAMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPK 300
Query: 258 RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 317
P D+ H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W L
Sbjct: 301 IYPSDRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDL 358
Query: 318 FEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
FE TFF +K YL + S + W G+VESR+R L K+E H
Sbjct: 359 FEKHTFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 232/402 (57%), Gaps = 49/402 (12%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS A PTD + +T L K LR +ESQ E R VL L +
Sbjct: 8 LGVTPPISTALPTDAEKRQTEALLKELRAQGTFESQAETDKRWAVLADLQRITDEFVKRA 67
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQML 91
V+GPG+DIDTL V P++ T ++ +F +L
Sbjct: 68 AQEKEPHNAILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQ-YFDIFPNLL 126
Query: 92 TEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQ 145
EM +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D D ++ +++L+
Sbjct: 127 VEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNLLR 186
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+
Sbjct: 187 GLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAM 246
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDK 263
LVAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+ P D+
Sbjct: 247 LVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDR 306
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W LFE TF
Sbjct: 307 NHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDLFEKHTF 364
Query: 324 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
F +K YL + S + W G+VESR+R L K+E H
Sbjct: 365 FTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/324 (47%), Positives = 210/324 (64%), Gaps = 37/324 (11%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSR--EEVLGRLD 58
M +N Q+ G+T P+SL PT+ +L T L K L + NL+E+ +EA R +E + ++
Sbjct: 1 MSQTNRQQWGVTAPVSLNKPTEHELKLTNDLLKTLHEYNLFETDKEAKQRIVKEFVYKVS 60
Query: 59 Q-------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
+ VHG GADIDTLCV P+H TRE FF + ML E
Sbjct: 61 KLQGLSESVARSAGGKIFTFGSYQLGVHGAGADIDTLCVFPQHVTREH-FFSIMFNMLNE 119
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
+PEVTEL V +A+VPV++ FSG+ ID + ARL L IPEDLD+S DS+L +E+ VR
Sbjct: 120 LPEVTELTSVVEAYVPVIRMHFSGIPIDFVCARLLLPSIPEDLDLSDDSLLVGLEEKCVR 179
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
S++G RVT++ILRLVP + FR +LR ++ WAK+RG+YSNV GFLGG+ WA+LVAR+CQ+
Sbjct: 180 SVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAMLVARVCQM 239
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YPNA + +VSRFF + ++W WP PVLL +EEG + P DK H MPIITP
Sbjct: 240 YPNACTASIVSRFFHIMSKWEWPQPVLLKPMEEGPI---------YPADKAHRMPIITPG 290
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQR 297
+P M +++NV+ ST IMM+EF +
Sbjct: 291 FPSMCATHNVTNSTRSIMMNEFLK 314
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 254/496 (51%), Gaps = 106/496 (21%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G + GIT ISLA P + D T+KL ++ ++E +EE R VLG+L+
Sbjct: 11 GQQPQKHYGITSAISLAPPREIDHHYTKKLCDAMKPFGVFEDEEELNHRLAVLGKLNNFV 70
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PRH R DFF
Sbjct: 71 KEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFQ 129
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
+ L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+
Sbjct: 130 SFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILR 189
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 205
N D + +RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+
Sbjct: 190 NLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAM 249
Query: 206 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 265
LVAR CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR +
Sbjct: 250 LVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS------ 303
Query: 266 LMPIITPA-YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
ITP Y M Y V T++ + E+N ++W L
Sbjct: 304 ----ITPVFYLLMVLHYIVLTAS---------------ASTEENH--LEWIGL------- 335
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDK 381
VES++R L +ER+ Y + +P PG ++
Sbjct: 336 -------------------------VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENR 370
Query: 382 SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAH 436
++ + S +F+G+ K+ V E D+ ++ F V + + K GM+I H
Sbjct: 371 NENDFVSMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATH 429
Query: 437 VTRRNLPNFVFPGGVR 452
V ++ L ++ P V+
Sbjct: 430 VKKKQLHQYLPPEVVQ 445
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 218/337 (64%), Gaps = 16/337 (4%)
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDLL+ARL+L IPEDLD+ +++L+N D + VRSLNGCRVTD+IL LVP I NFR TLR
Sbjct: 1 IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
++ WAK + VYSNV GFLGG++WA+LVARICQLYPNA+ + LV +FF +Y++W WP PV
Sbjct: 61 AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120
Query: 240 LLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
LL + E L +WDPR NP D++HLMPIITPAYP NS++NVS S+ +M D F+RG
Sbjct: 121 LLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRG 180
Query: 299 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLT 358
++ E + + W LF P FF+ YK+Y+ + + +++ W+G VES++R L
Sbjct: 181 FQVMEEIYSKTS--TWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILI 238
Query: 359 LKIERHTYNMLQCHPHPGDFSDKSKP---LYCSYFMGLQRKQGVPVG-EGEQFDIRLTVK 414
+ +ER+ + L H +P + K +F+GL+ ++ P G + + DI ++
Sbjct: 239 VNLERNQFVKL-AHVNPKSYDPILKSESGTVSRWFIGLEFQK--PEGTKNVKVDITAEIQ 295
Query: 415 EF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
F KQA + R+ GM+ HV ++ L N++
Sbjct: 296 YFTSTVHKQACQIAIFRE-GMRTEARHVKKKQLSNYL 331
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 249/485 (51%), Gaps = 56/485 (11%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH P +DID L + P H TR+ DFF L V ELHPV A+ PV+KF+ GV
Sbjct: 58 VHTPSSDIDCLVLAPPHLTRD-DFFTTWVTALQNEARVKELHPVSGAYTPVIKFEIEGVK 116
Query: 120 IDLLYARLSLWVIPEDLDISQ-------DSILQNADEQTVRSLNGCRVTDQILRLV---- 168
IDL++ARL+ I ++ + D++L DE +VRS+NG RV +L +
Sbjct: 117 IDLIFARLNEPTINNHDELDEIKEMELDDTLLIGLDETSVRSINGVRVAQYLLSTLETTD 176
Query: 169 ---------PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 219
++ NFR TLR ++ WA+ G+YSNV GFLGG+NWA+LV +C+ YP+A
Sbjct: 177 KNRKNYDSATQVDNFRLTLRAVKEWARVHGLYSNVLGFLGGVNWAILVCWVCKRYPDAPA 236
Query: 220 SMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYP 275
S L+ FF+ ++ W+WP PVLL + EG L VWDP N +D HLMPIITP YP
Sbjct: 237 STLLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKHLMPIITPCYP 296
Query: 276 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 335
MNSSYNV LR + DEF R ++C + W LFE FF+ + NYL++D
Sbjct: 297 SMNSSYNVGEPQLRRLRDEFARASKLCSDVAFGTK--KWGVLFEWNEFFQQHANYLQVDT 354
Query: 336 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK----PLYCSYFM 391
A N DD R W G E+R+R L +E + + + +P F + S+F+
Sbjct: 355 VATNEDDFRAWFGLCEARMRLLIAGLESPGFGV-RAYPFAKFFHRREDGGGGNYIASFFI 413
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 451
L+ V + D+ V +F ++ + R+P M + + V+R++LP+FVF
Sbjct: 414 ALRFANKV-----WKVDLAPLVTDFLTVINSWDGREPTMDLMIRLVSRKDLPSFVF---- 464
Query: 452 RPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE 511
D+ + E KP + +D+V+ + +AT PS+
Sbjct: 465 ----------DAEKREEHITKPVLKPNNQQSSANRTDEDDVENQV-----NATTPSAKKN 509
Query: 512 FREGS 516
+GS
Sbjct: 510 ELDGS 514
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 257/460 (55%), Gaps = 45/460 (9%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPGAD 66
+R GIT PIS+A P D D + T KL + ++ ++E +EE R VL +L+ +
Sbjct: 41 RRYGITSPISVAFPRDVDRIYTEKLIEAMKPFGVFEDEEELNRRVVVLDKLNNL------ 94
Query: 67 IDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAR 126
+ + EV + V DA+VPV+KF+F G+ IDL++AR
Sbjct: 95 -----------------------VKEWIAEVGKNKAVEDAYVPVIKFEFDGIEIDLVFAR 131
Query: 127 LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAK 186
L+L I ++LD+ DS L++ D + +RSLNG RVTD+IL LVP +NFR TLR ++ WAK
Sbjct: 132 LALPTISDNLDLRDDSSLKSLDIRCIRSLNGFRVTDEILHLVPNKENFRLTLRAIKLWAK 191
Query: 187 RRGVYSNVAGF--LGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 244
R+ + + + + L I+WA+L C++Y N S V+R + ++ WPNPVLL
Sbjct: 192 RKYLINLILCYQPLCLISWAVLSXITCKIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEP 251
Query: 245 EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 304
EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVSTST IM++EF+ G + +
Sbjct: 252 EESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADE 311
Query: 305 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ + ++ DW L EP FF+ YK+Y+ + S+ + W G VES++R L +ER+
Sbjct: 312 IFQGKS--DWPKLLEPPNFFQKYKHYIVLTASSSTEEHHLEWVGLVESKIRVLVGNLERN 369
Query: 365 TYNMLQCHPHPGDF-SDKSKPLYCSY----FMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 419
+ L H +P F ++++P Y F+G+ K+ E D+ ++ F
Sbjct: 370 EFITL-AHVNPQSFPGNRTQPKESDYVSLWFLGIIFKKA-ENAESVNIDLTYDIQSFTDT 427
Query: 420 V----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 455
V + + K GM+I HV ++ L ++ P + R
Sbjct: 428 VYRQANNINMLKEGMKIEATHVKKKQL-HYYLPADLLQKR 466
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 205/322 (63%), Gaps = 14/322 (4%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+ A+ID LCV PR+ R+ D+FG ++L + PEVTE V + VP +K G+
Sbjct: 20 VNHKRANIDALCVAPRNIERQ-DYFGSFLELLKKQPEVTECRAVEEVLVPDVKMNLDGIK 78
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDLL+ARL+L IP++ D+ +D +L+N D + VRSLN CR TD+ILRLVP I NFR LR
Sbjct: 79 IDLLFARLALKEIPDNFDLCEDMLLKNLDPKLVRSLNRCRATDEILRLVPNIDNFRLALR 138
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
+ WAK+ G+YSN G+ GG++WA+LVAR CQL PN V + V +FF V+++W+W +PV
Sbjct: 139 STKLWAKKHGIYSNSLGYFGGVSWAMLVARTCQL-PNVVAATQVHKFFLVFSRWKWSHPV 197
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
L + +LG QVWDPR N + ++HLMPIITPAYP ST ++M++EF RG
Sbjct: 198 FLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYP---------HSTRKVMLNEFSRGM 248
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+I + + +A WD LFE +FF Y+ + + +++ N DDL W VES++R L
Sbjct: 249 QITDEIMLGKA--GWDKLFEAPSFFFKYRYIIVLLVTSNNTDDLLEWCELVESKIRYLIQ 306
Query: 360 KIERHTYNMLQCHPHPGDFSDK 381
+ER + L H +P F +
Sbjct: 307 NLERILHINL-AHVNPKCFEQQ 327
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 228/401 (56%), Gaps = 49/401 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A PT+++ L K LR +ES E RE+VL L++
Sbjct: 8 GVTPPISTALPTENEKRLHDALHKELRAQGTFESPAERAKREKVLAELEKITNVFVKRAA 67
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+GPG+DIDTL V P++ T E+ +F Q+L
Sbjct: 68 QEKQPKNSILIRDAIGRVFTYGSYRLGVYGPGSDIDTLVVAPKYVTVEQ-YFRIFPQVLV 126
Query: 93 EMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 146
EM + +L PVP+A VP++KF+F G+SIDL++ + +L +P D + ++ +++L+
Sbjct: 127 EMAPPGAIKDLTPVPEAFVPIIKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNLLRG 186
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
E VRSLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ WA+L
Sbjct: 187 LSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAML 246
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKY 264
VAR+CQLYP A +++V++FF + +W WP PVLL IE G + VW+P+ D+
Sbjct: 247 VARVCQLYPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRN 306
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NV ST+ ++ E ++G +I + + W LF TFF
Sbjct: 307 HKMPIITPAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRR--PWKDLFTKHTFF 364
Query: 325 -EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+K YL + S+ W G++ESR+R L K+E H
Sbjct: 365 TNGFKYYLTVISSSRTKQAQNAWSGFIESRVRLLVNKLEMH 405
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 199/338 (58%), Gaps = 24/338 (7%)
Query: 59 QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 118
+VH PGADID++CV P H TRE DFF L ML E P+V L V A VP+M F GV
Sbjct: 61 RVHEPGADIDSICVAPNHCTRE-DFFDTLKAMLLEHPQVENLRSVETAVVPIMTFDLDGV 119
Query: 119 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTT 177
+IDLL+A L L IP LDI +D++LQ DE T +SLNG RVT+ I +LV ++F
Sbjct: 120 NIDLLFAHLPLNAIPASLDIDEDAVLQGVDEATEKSLNGPRVTNLIYKLVSHNYESFLQV 179
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 237
LR R WAKRRG+YSN G+ GGIN+ +LVA ICQL+P A PS L+ +FF ++ +W WP
Sbjct: 180 LRVARVWAKRRGIYSNKLGYFGGINFNILVALICQLFPKATPSYLLCKFFAIFAKWDWPA 239
Query: 238 PVLLCAIEEGSLGLQVWD---PRRNPKDKYH-----LMPIITPAYPCMNSSYNVSTSTLR 289
P +LC + G +VW + + YH LMPI+TPAYP MNS+ NV+ +
Sbjct: 240 PAILCRPLDHGYGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTPAYPAMNSAANVNPWSFA 299
Query: 290 IMMDEFQRGHEIC--------EAMEKNEADVD-----WDTLFEPFTFFEAYKNYLRIDIS 336
++ DEF RG E+C E E D D WD L E FF+ Y YL +++
Sbjct: 300 VLRDEFARGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVEKTDFFDKYDAYLAVNVL 359
Query: 337 AEN-ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 373
+ +D N+KG++ SRLR+L K+ M+ P
Sbjct: 360 GDGEKEDFDNFKGFLSSRLRKLVEKMGHLPLKMIHLFP 397
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 228/403 (56%), Gaps = 43/403 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSR---------- 50
M SNG + G++ P+S A P+ D L L+ N +ES EE R
Sbjct: 1 MSESNGAQFGVSSPLSTAPPSRQDTELGETLLTELKAQNNFESPEETAKRNSVLQKLQKL 60
Query: 51 -------------------EEVLGRLDQ-------VHGPGADIDTLCVGPRHATREEDFF 84
+E G++ V+GPG+DID+L V P+H +R+ DFF
Sbjct: 61 LQKLVQDVGKKKGMSPELLKEAGGKIFTYGSYRLGVYGPGSDIDSLMVAPKHVSRD-DFF 119
Query: 85 GELHQML--TEMPE-VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ M+ T PE +TE+ V A VP++K K GV IDL++A L IP +LD+
Sbjct: 120 ERMPGMIRATFKPEEITEMVVVAAAAVPIIKTKLMGVDIDLIFANLQRDSIPTNLDLGDT 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
++L+ D+ ++ +NG RVTD+IL LVP+ + FR LR ++ WA++R VY +A + GG+
Sbjct: 180 NLLRGLDDTDLKCVNGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
+ ++VAR+CQLYPNA +V +FF + W WP+P+ L A E+G LG WDP NP
Sbjct: 240 AYGMIVARVCQLYPNAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPG 299
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
DK HLMP+ITPAYPCMNS++ ++ ST+ ++ E RG +I E E W LF
Sbjct: 300 DKRHLMPVITPAYPCMNSTHTITPSTMAVLKKESDRGEKIMN--EIYEGKRPWKDLFAKH 357
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 363
TFF +AY++Y+ I +A D + W G V+SR+++L IE+
Sbjct: 358 TFFSDAYQHYICIITAARTKDAQQAWSGLVQSRVKRLLAGIEQ 400
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 226/383 (59%), Gaps = 17/383 (4%)
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
H++L EV +L + +A V V+K F G+ ID+L+A L +P+ +D + D +L+
Sbjct: 4 HELLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYL 63
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFR-TTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
D++ VRSLNGCRVT +IL+ V ++NFR TTL+ ++ AK G+YSNV G+LG ++WA+L
Sbjct: 64 DQKCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAIL 123
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK--Y 264
VAR CQLYPNA P+ L+ +FF +++ W WP PVLL ++++ +LGLQVWDPR N D+ Y
Sbjct: 124 VARTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPY 183
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS++NV+ ST IM + + I + + +A WD LFEP FF
Sbjct: 184 HLMPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKA--SWDKLFEPSNFF 241
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 384
+ K+++ + S+ W G++ES++R L +R+ N+ H +P F P
Sbjct: 242 DEXKHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNP-NITFAHINPKSFP----P 296
Query: 385 LY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 437
L C + +GL ++ + DI+ +K + V L K GM +V
Sbjct: 297 LKPEEDEHGCMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYV 356
Query: 438 TRRNLPNFVFPGGVRPSRPSKGT 460
R+NL N++ ++ R + +
Sbjct: 357 RRKNLSNYIAANQIKRGRKTSSS 379
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 243/444 (54%), Gaps = 54/444 (12%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
DIDTL P H RE FFG +Q+L E P VT+LH A VPV+K GV +DLL
Sbjct: 93 AGDIDTLLCFPHHIKRES-FFGTFYQLLKETPGVTDLHAAEGAFVPVIKLAMDGVELDLL 151
Query: 124 YARLSLWVIPEDLDISQDSILQNADE-QTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCM 181
+A L + + L + +L+ E + +RS+NGCRV D +L ++P +Q FRT LR +
Sbjct: 152 FASLPVDRLEPTLSLQDVDLLKKIHEDEIMRSINGCRVADAVLEVMPSNLQTFRTALRAV 211
Query: 182 RFWAKR-------------RGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 228
+ WAK RGVYSNV G+ GGI+ +LV RICQLYPNA S ++ +FFR
Sbjct: 212 KLWAKHNLTRSNQTVRTSGRGVYSNVHGYFGGIHLVILVTRICQLYPNAAASTILCKFFR 271
Query: 229 VYTQW-----------------RWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
VY+ W W N P+ + +++ LG + WDPR NP+D+Y LMPII
Sbjct: 272 VYSDWYGSNWIKHAREIWLAHGEWMNSPIKIKDVDDLHLGKRQWDPRSNPRDRYDLMPII 331
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TP YP N+++NV+ STL ++ EF RGH +C+ + + ++V W ++EP FF+ Y+ +
Sbjct: 332 TPVYPQQNAAFNVNESTLHRIVTEFSRGHRVCQDIMRASSNVPWSAVWEPIRFFDEYQYF 391
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDK---- 381
+R+ SA D ++G VES +R L L ++ +T N+ +P + +DK
Sbjct: 392 VRVVASAATESDRTEFEGLVESTVRHLVLNLQ-YTDNVAYAMAYPKAYHEDPVADKDGTE 450
Query: 382 --SKPLYCSYFMGLQ---RKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQ 431
+ P ++++ L+ +++G + D++ + F + V+M + M
Sbjct: 451 ATTGPWRTAWYLALEFGIKQEGRIEPAPSKLDLQGPLVAFYGRLRDRTVTMSRYDETTMN 510
Query: 432 ISVAHVTRRNLPNFVFPGGVRPSR 455
+ V + + LP +++PGGV P R
Sbjct: 511 VDVQAMKQSKLPGYLYPGGVNPHR 534
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 230/401 (57%), Gaps = 49/401 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A PT+ + + L LR +ES+ E R+EVL +L++
Sbjct: 7 GVTPPISTALPTEQEKALNKALHDELRAQGTFESRAETEKRKEVLAQLEKITNAFVQRAA 66
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+GPG+D+DTL V P++ T E+ +F ++L
Sbjct: 67 REKHGKNAILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPEVLV 125
Query: 93 EMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQN 146
EM +T+L PVP+A VP++KF+FSG+SIDL++ + +L +P D ++ +++L+
Sbjct: 126 EMAPPAAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNLLRG 185
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
E VRSLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+L
Sbjct: 186 LSENAVRSLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAML 245
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKY 264
VAR+CQLYP A +++V++FF + +W WP PVLL IE + VW+P+ D+
Sbjct: 246 VARVCQLYPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRN 305
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITPAYP M +++NV S++ ++ E ++G E+ E + W LF TFF
Sbjct: 306 HKMPIITPAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRR--PWKDLFTKHTFF 363
Query: 325 EA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ +K YL + S+ W G++ESR+R L KIE H
Sbjct: 364 TSGFKYYLTVISSSRTKKAQNVWSGFIESRVRLLVNKIEMH 404
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 232/401 (57%), Gaps = 47/401 (11%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG+T PIS A PTD + +T L K LR +ESQ E R VL L +
Sbjct: 8 LGVTPPISTALPTDAEKRQTDALFKELRAQGTFESQAETEKRWAVLADLQRITDEFVKRA 67
Query: 60 ----------------------------VHGPGADIDTLCVGPRHATREE--DFFGELHQ 89
V+GPG+DIDTL V P++ T ++ D F +L +
Sbjct: 68 AQESEPHNSILIRDARGRIFTYGSFRLGVYGPGSDIDTLVVVPKYVTVKQYFDIFPKLLE 127
Query: 90 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 146
+ +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D + ++ +++L+
Sbjct: 128 EMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNNNLLRG 187
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+L
Sbjct: 188 LSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAML 247
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKY 264
VAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+ P D+
Sbjct: 248 VARVCQLYPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRN 307
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W LFE TFF
Sbjct: 308 HKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKR--PWKDLFEKHTFF 365
Query: 325 -EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+K YL + S + W G+VESR+R L K+E H
Sbjct: 366 TNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 224/401 (55%), Gaps = 44/401 (10%)
Query: 3 SSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---- 58
+ N G++ P+S PT+ DL + L L+ N +E E REEVL +L+
Sbjct: 2 AQNDDTRGVSAPLSTDSPTERDLKLSADLMTELKAQNNFEPPEATQKREEVLVKLEGLLK 61
Query: 59 --------------------------------QVHGPGADIDTLCVGPRHATREEDFFGE 86
+V GPG+DID L + PRH TRE DFF
Sbjct: 62 ELVRKVGKSKGLPEEILQQAGGKIFTYGSYRLKVFGPGSDIDALMIAPRHVTRE-DFFKY 120
Query: 87 LHQML---TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
+ M+ T ++TEL PV A+VP++K + GV++DL+++ L + +P+DL + ++
Sbjct: 121 MPDMIRQSTPTEQLTELVPVEAANVPIIKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNL 180
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ E +R +NG RVTD++L+LVP+ + FR LR ++ WA RRGVY NV GF GG+ +
Sbjct: 181 LRGLSETDLRCVNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGVGY 240
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKD 262
A++V R+CQLYP A ++V++FF V +WRWP+PV LC E LG V NP +
Sbjct: 241 AMMVVRMCQLYPRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWE 300
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
K MPIITP +PCMN++ ++ S L +++ EFQR +I + + +W LF T
Sbjct: 301 KADKMPIITPVFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQ--EWQALFARQT 358
Query: 323 FF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
FF E YK+YL + + + + W G+V SRLR+L IE
Sbjct: 359 FFTEDYKHYLCLVTGSRTKEAQQAWSGFVSSRLRKLVSSIE 399
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 219/440 (49%), Gaps = 77/440 (17%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---------- 58
LG+T PI+ P + D + L LR++ +YES R VL RL
Sbjct: 13 LGVTPPINTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAIADAWCENE 72
Query: 59 -------------------------------------QVHGPGADIDTLCVGPRHATREE 81
VH P ADID + V PRH TR
Sbjct: 73 WALAIAERACDGADCERALAASAPPRCELRTFGSVRLDVHTPDADIDVVLVAPRHCTRRA 132
Query: 82 DFFGELHQMLTEMPEVTE--LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS 139
FF L L + + V DA+ PV+K + +DLL+A L+ +PE LD+
Sbjct: 133 -FFDTLVAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAPLACDELPEPLDVM 191
Query: 140 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 199
D++L+ DE +RSLNG RV + +L LVP FR LR ++ WA+ +G+YSNV G LG
Sbjct: 192 DDAVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLG 251
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---------EEGSLG 250
G+N A+L A +CQ YPNA PS +V RFFR++ W WPNPVL+ A E +
Sbjct: 252 GVNCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASR 311
Query: 251 LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK--- 307
W+PR NP+D+ HL PI+TPA+P MNSSYNV LR + DE +G E +EK
Sbjct: 312 YAAWNPRLNPRDRAHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAA 371
Query: 308 -----------NEADV--DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
AD+ W LF P FF +++Y+++D+SA + LR W W ESRL
Sbjct: 372 HWRADESPTGDRAADLRDAWRRLFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRL 431
Query: 355 RQLTLKIERHTYNMLQCHPH 374
R L + ++ Y ++ PH
Sbjct: 432 RNLVVALDTPGY--VRARPH 449
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 228/396 (57%), Gaps = 44/396 (11%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSRE--------- 51
M S + LG++ P+S P D +L L+ N +ES EE R+
Sbjct: 1 MASQTAEYLGVSPPLSTEPPKPRDNELHDQLLAELKAQNNFESPEETAKRQNVLVKLQKL 60
Query: 52 --------------------EVLGRLDQ-------VHGPGADIDTLCVGPRHATREEDFF 84
E G++ V+GPG+DIDTL + P+H TRE DFF
Sbjct: 61 LLQLVQRVGKKKGLNPELLKEAGGKIFTYGSFRLGVYGPGSDIDTLMLSPKHVTRE-DFF 119
Query: 85 GELHQMLTE-MP--EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ M+ + +P ++TEL PVP VP++K + G+SIDL++ L +P +L+++
Sbjct: 120 EYMPDMIRQAIPAEDITELVPVPGIGVPIIKTEIEGISIDLIWCTLHKDRVPPNLELNDS 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ E ++ +NG RVTD+IL LVP+ + FR LR ++ WA++RG+Y NV G+ GG+
Sbjct: 180 ELLRGLSETDLKCVNGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNP 260
+A++VAR+CQLYP A S +V++FF V W+WP+P+ L A E+G SL Q WDP++N
Sbjct: 240 AYAMMVARVCQLYPRAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNF 299
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
+DK HLMP+ITPAYP MN+++ ++ ST +++ E RGHEI + + W L
Sbjct: 300 RDKRHLMPVITPAYPVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKK--QWRDLLIK 357
Query: 321 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLR 355
FF AY++Y+ I +++ DD + W G V SRLR
Sbjct: 358 HEFFTSAYQHYIVIVTASKTKDDQQAWAGLVTSRLR 393
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 234/401 (58%), Gaps = 49/401 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A PT+++ L + LR +ES E R+EVL +L++
Sbjct: 7 GVTPPISTALPTEEEKRLNNALHQELRAQGTFESPAETEKRKEVLRQLEKITNVFVQRAA 66
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+GPG+D+DTL V P++ T E+ +F ++L
Sbjct: 67 AEKEPKNTILIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFRIFPEVLV 125
Query: 93 EMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 146
EM +T+L PVP+A VP++KF+FSG+SIDL++ + +L +P D + ++ +++L+
Sbjct: 126 EMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLRG 185
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
E VRSLNG RVTD IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+L
Sbjct: 186 LSENEVRSLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAML 245
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKY 264
VAR+CQLYP A +++V++FF + +W WP PVLL IE G + VW+P+ D+
Sbjct: 246 VARVCQLYPKATSAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRN 305
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
H MPIITP+YP M +++NV S++ ++ DE ++G ++ E + + + W LF TFF
Sbjct: 306 HRMPIITPSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKR--PWKDLFTKHTFF 363
Query: 325 EA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ ++ YL + S+ W G+VESR+R L K+E H
Sbjct: 364 TSGFRYYLTVISSSRTKKAQNVWSGFVESRVRLLVNKLEMH 404
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 196/315 (62%), Gaps = 7/315 (2%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMP---EVTELHPVPDAHVPVMKFKFS 116
V+GP +D+DTL V P+H TREE FF + +L + E+TEL PVP P++K K
Sbjct: 94 VYGPNSDVDTLMVAPKHVTREE-FFEYMPDLLRKSAAPGEITELVPVPGIGTPIIKLKIQ 152
Query: 117 GVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRT 176
GV IDL++ L + +P+ +D++ D++L+ D+ VR +NG RVT++IL+LVP+ + FR
Sbjct: 153 GVDIDLIFCSLQVQSVPDKMDLADDNLLRGLDDTDVRCVNGTRVTNRILQLVPQTKTFRY 212
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWP 236
LR ++ WA+RR +Y N+ G+ GG+ WA+LVAR+CQLYP AV ++V RFF + +W WP
Sbjct: 213 ALRAIKLWAQRRAIYGNIVGYPGGVAWAILVARVCQLYPKAVAPLIVQRFFFIVKRWNWP 272
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
PV L E SL ++ WDP + D HLMPI+TPA P N+++ V ST +MM E +
Sbjct: 273 KPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVPSTNTAHTVGPSTKMVMMRELE 332
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLR 355
RG +I + W LFE FF AYK+Y+ + ++++ D W G V+S+++
Sbjct: 333 RGEQIIADIYSKSK--PWKALFERHNFFTTAYKHYICVVTASKSKDAQDAWAGLVQSKIK 390
Query: 356 QLTLKIERHTYNMLQ 370
L IE N ++
Sbjct: 391 WLVQGIESSDANSIE 405
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/480 (36%), Positives = 254/480 (52%), Gaps = 60/480 (12%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD--------------- 58
P+S A P D R ++L + + + E +EE R + G+L+
Sbjct: 23 PVSSAAPQGTDCKRLQRLTETXKPSGVSEEEEELQCRILIWGKLNNLVKEWIRGLNESKK 82
Query: 59 ------------------QVH------GPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
Q H GAD D LC PRH DFF ++ L
Sbjct: 83 LPXPVTENVGRNFFLLVNQCHHLLSGLTKGADTDALCAVPRHVN-XRDFFTSFYEKLKLQ 141
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
EV +L V +A VPV+K F G ID+L+ARL+L IPEDLD+ DS+L+ D + +RS
Sbjct: 142 EEVKDLRAVEEAFVPVIKLCFDGTKIDILFARLALQTIPEDLDLXDDSLLKRLDIRCIRS 201
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 214
LNGC++T++IL LV + NFR TLRC++ WAK VYSN+ GF+ G++WA+L AR CQLY
Sbjct: 202 LNGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAMLGARTCQLY 261
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 274
P A+ S LV FF V+++W PNPVL+ E+ +L L VWD R NP D+Y PIITPAY
Sbjct: 262 PIAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAY 321
Query: 275 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 334
P NS+Y+ S ST ++++EF+ I + + + V+ LFE FF+ YK+Y+ +
Sbjct: 322 PQQNSTYSASISTQMVVVEEFKXSLSITDXL---LSKVEXSKLFEAPIFFQKYKDYIVLL 378
Query: 335 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS- 388
A W G VES++ L +E++ + L Q P P + DK + +C+
Sbjct: 379 AGAPTEKQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKE--FCTV 436
Query: 389 YFMGLQRKQG---VPVGEGEQFDIR-LTVKEFKQA--VSMYTLRKPGMQISVAHVTRRNL 442
+ +GL K+ + DI+ T ++QA M+ + M+I+ HV R+ L
Sbjct: 437 WVIGLVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMFEV---DMRIAATHVKRKQL 493
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 206/331 (62%), Gaps = 25/331 (7%)
Query: 44 QEEAVSREEVLGRLDQ-VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHP 102
Q + R +LGR + +ID LCV PR+ R+ D+FG ++L + PEVTE
Sbjct: 13 QRSSAERSTLLGRTGWPLTTILTNIDALCVAPRNIERQ-DYFGSFLELLEKQPEVTECRA 71
Query: 103 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 162
V + VP +K F G+ IDLL+ARL+L IP++ D+ +D +L+N D + +RSLNGCR TD
Sbjct: 72 VEEMLVPDVKMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLMRSLNGCRATD 131
Query: 163 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 222
+ILRLVP I NFR LR + WAK+ G+YS G+ GG++WA+LVAR CQL PN VP L
Sbjct: 132 EILRLVPNIDNFRLALRSTKLWAKKHGIYSTSLGYFGGVSWAMLVARTCQL-PNVVPVFL 190
Query: 223 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 282
+ P+ V +LG QVWDPR N + ++ LMPIITPAYP NS+++
Sbjct: 191 -----------KRPDTV--------NLGFQVWDPRVNVQGRFDLMPIITPAYPQQNSTFH 231
Query: 283 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 342
VS+ST +IM++EF RG +I + + +A WD LFE +FF Y+ ++ + +++ N DD
Sbjct: 232 VSSSTRKIMLNEFNRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRYFIVLLVTSNNTDD 289
Query: 343 LRNWKGWVESRLRQLTLKIERHTY-NMLQCH 372
L W G VES++R L +ER + N+ H
Sbjct: 290 LLEWCGLVESKIRYLIQNLERILHINLAHVH 320
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 228/390 (58%), Gaps = 27/390 (6%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VHGP +DID LCVGP A+ +DFF L ML PEV+E+H V DA VP+M+FKF G+S
Sbjct: 185 VHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGIS 244
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+DL YA+L L +PE+L++ L+N DE + +SL+G R + IL+LVP ++NF++ LR
Sbjct: 245 VDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILR 304
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++ WAKRRGVY N+ G+ GG++ A+L A +CQ P+A ++L+S FF+ ++ W WP PV
Sbjct: 305 CIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPV 364
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
A+E+G L P ++ LMPI P P N++ ST + E GH
Sbjct: 365 ---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGH 415
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ + + D DW+ +FEPF + + Y +++I +S+ N D+L +W GWV+SR R L
Sbjct: 416 ALTRDLLR--LDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLA 473
Query: 360 KIERHTYNMLQ--CHPHPGDF--SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKE 415
K+E +Q C P+P +F D +P +F G+Q G DI + +
Sbjct: 474 KVEE-----VQGLCDPNPTEFIDPDAGEP-NVVFFWGVQP------GRINFSDIDVVEDD 521
Query: 416 FKQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
F Q ++ + P +++++ + LP +
Sbjct: 522 FMQNINNGGYQGPPGKMNLSVIPTSQLPGY 551
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 229/419 (54%), Gaps = 44/419 (10%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M ++ G+T IS AGP ++ L + L N++E+ E R++V+ L V
Sbjct: 1 MDGPKNKQYGVTSAISTAGPGPEEAKLNDSLVETLTRKNVFETPEGNKKRDDVIRHLQTV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
HGP +DID+L V P+ + + DFF
Sbjct: 61 VEEFVRRVCKQKGVKQAAIDVAGGKVFTFGSYALGVHGPTSDIDSLVVVPKQVSID-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQ 140
+ EM ++TEL+PV DA VP++K ++ GVS+DL++A L L +P D++ +
Sbjct: 120 RNFPSIFREMSKSEDITELNPVEDAFVPIIKMEYRGVSLDLIFASLPKLSSVPRDMETIE 179
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
L EQ +RS+NG RVT ++L VP +FR LR ++ W+ RG+Y V G+ GG
Sbjct: 180 KKNLDGLAEQAMRSVNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGG 239
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 260
+ WA++VARICQLYP A + +VS+FF + +W WP PVLL IEEG++GL+VW+P+
Sbjct: 240 VAWAIMVARICQLYPFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYH 299
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
D+ HLMPIITPA+P M S++ V STLRIM +EFQR +I + + WD LFE
Sbjct: 300 GDRSHLMPIITPAFPSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTK--TWDALFER 357
Query: 321 FTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF + +K YL I ++ + + G V+S++R + I+ + P+P F
Sbjct: 358 HSFFTKDHKYYLTIVAASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYPKCF 416
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 268/531 (50%), Gaps = 85/531 (16%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M + GIT IS A PT+ D L + L +N++E+ E REEVL + +V
Sbjct: 1 MDEPKKPKWGITHSISEAPPTEADNKLNDNLIETLTRLNVFETLEGNKRREEVLAHVQKV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDF- 83
HGP +DIDTL V P+H E+ F
Sbjct: 61 VEEFVRRAGKLKGIAQSTLDVAGGKIFFFGSYALGVHGPTSDIDTLIVVPKHVFIEDFFK 120
Query: 84 -FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQD 141
F + + L+ +++EL PV DA+VP++K ++ GVS+DLL+A + ++ +P++L+
Sbjct: 121 IFPSIFRELSNAEDISELVPVEDAYVPIIKMEYRGVSLDLLFASMPTMSSVPKELETVDK 180
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
S+L++ +E T+RS+NG RV ++L VP+ ++FR LR ++ WA RR +Y V G+ GGI
Sbjct: 181 SVLRHLEETTIRSVNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGI 240
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN-- 259
WA++VARICQLYP A + ++S+FF + +W+WP PV+L E GL+VW+P
Sbjct: 241 AWAIMVARICQLYPMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSY 300
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
P D HLMP+ITPA+P M S++ V+TST +IMM+EFQR +I + + W+ LF
Sbjct: 301 PPDARHLMPVITPAFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQG--TWEALFN 358
Query: 320 PFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+FF + +K YL + ++ + + G V+S++R L I+ + P P F
Sbjct: 359 NHSFFTQDHKYYLSVIAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGF 418
Query: 379 ---------------------------------SDKSKPLYC-SYFMGLQRKQGVPVGEG 404
+ + +Y ++++GL+ + E
Sbjct: 419 ERVHRCKNEDEVEAVTKGSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGLRLPK-----ER 473
Query: 405 EQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVRP 453
DI F+ ++ L G M + V H LP+ +F PG VRP
Sbjct: 474 STLDISYITNHFRSKITESKLYDEGTMSVKVVHTRNTALPDDLFKPGEVRP 524
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 227/389 (58%), Gaps = 25/389 (6%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VHGP +DID LCVGP A+ +DFF L ML PEV+E+H V DA VP+M+FKF G+S
Sbjct: 144 VHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGIS 203
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+DL YA+L L +PE+L++ L+N DE + +SL+G R + IL+LVP ++NF++ LR
Sbjct: 204 VDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILR 263
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++ WAKRRGVY N+ G+ GG++ A+L A +CQ P+A ++L+S FF+ ++ W WP PV
Sbjct: 264 CIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPV 323
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
A+E+G L P ++ LMPI P P N++ ST + E GH
Sbjct: 324 ---ALEDGRL------PTGGTRETRALMPIQLPCSPYGYCHSNITKSTFYRITTELTLGH 374
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ + + D DW+ +FEPF + + Y +++I +S+ N D+L +W GWV+SR R L
Sbjct: 375 ALTRDLLR--LDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLA 432
Query: 360 KIERHTYNMLQ--CHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF 416
K+E +Q C P+P +F D + +F G+Q G DI + +F
Sbjct: 433 KVEE-----VQGLCDPNPTEFIDPDAGGPNVVFFWGVQP------GRINFSDIDVVEDDF 481
Query: 417 KQAVSMYTLRKPGMQISVAHVTRRNLPNF 445
Q ++ + P +++++ + LP +
Sbjct: 482 MQNINNGGYQGPPGKMNLSVIPTSQLPGY 510
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 199/322 (61%), Gaps = 13/322 (4%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+GP +DID +CVGP AT EDFF L ML PEV+ +H V DA VP+M+FKF G+S
Sbjct: 74 VYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVPLMRFKFDGIS 133
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDL YA+L + +P+++D+ L N DE + +SL+G R +IL+ VP ++NF++ LR
Sbjct: 134 IDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVPNLENFQSMLR 193
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++ WA+RRGV N+ GFLGG++ A+L A +CQ YPNA S L+S FF Y W WP PV
Sbjct: 194 CIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFATYATWPWPTPV 253
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+L ++G + P + + MPI P P N++ ST + EF RGH
Sbjct: 254 ML---QDG-----MSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIRTEFLRGH 305
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ + + K D DW+ +FEPF + + Y +++I +SA + D++ +W GWV+SR R L L
Sbjct: 306 SLTKDLLK--PDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFRALLL 363
Query: 360 KIERHTYNMLQCHPHPGDFSDK 381
K+E QC P P +++D+
Sbjct: 364 KLEGLQG---QCDPSPVEYADR 382
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 233/427 (54%), Gaps = 48/427 (11%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH P AD+D L + PRHATR+ DFFG ++L + V +LHPV A+ PV+KF GV
Sbjct: 163 VHTPDADVDCLVLAPRHATRD-DFFGSWVRILKQKKGVEDLHPVSSAYTPVIKFVMDGVK 221
Query: 120 IDLLYARLS--LWV------------------IPEDLDISQDSILQNADEQTVRSLNGCR 159
IDL++A +S +W+ ++D+ DS+L DE +VRS+NG R
Sbjct: 222 IDLIFASISNEVWLREHAQCVKSGDGGAEDGGSEREVDV-DDSLLVGLDEASVRSVNGVR 280
Query: 160 VTDQILRLVP---KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
V +L + +++N+R TLR ++ WA+ +G+YSNV G+LGG+NWA+LV +C +P+
Sbjct: 281 VAQYLLSTMSSPRQLENYRLTLRAVKEWARVQGMYSNVLGYLGGVNWAILVCFVCIRHPD 340
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL------GLQVWDPRRNPKDKYHLMPII 270
A + L+ FF + W WP+PV+L + VWDPR N +DK H+MPII
Sbjct: 341 ASSARLLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPVWDPRENYRDKLHVMPII 400
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD-----WDTLFEPFTFFE 325
TP YP MNSS+NV LR M DEF+R + + A + W +LFE FF
Sbjct: 401 TPCYPSMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGEDGKKGWSSLFERSGFFG 460
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 385
+ YLR+D++A D+ W G E+R+R L +E + ++ +P + +K
Sbjct: 461 QHGAYLRVDVAATTEDEFLRWFGLCEARMRLLIAGLE---SDEIRAYPFARFYRRDTKEE 517
Query: 386 YC-SYFMGLQRKQGV--PVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 442
Y S+F+ L+ GV V GE+ V E+ V+ + R GM + + + R +L
Sbjct: 518 YVSSFFVALRFASGVDRDVRWGER------VSEYLHVVNSFEGRTAGMDLRLELLKRADL 571
Query: 443 PNFVFPG 449
P FVF G
Sbjct: 572 PRFVFDG 578
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 230/442 (52%), Gaps = 56/442 (12%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGE-------------------------LHQMLTEM 94
VH PGADIDT+ V P +R+ DFFG L + +
Sbjct: 103 VHEPGADIDTIAVAPSFCSRD-DFFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQ 161
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
P VT PV +A VP++ F + G++IDLL+ARLS IP + DI D +L D T +S
Sbjct: 162 PHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKS 221
Query: 155 LNGCRVTDQILRLV----PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
LNG RVT+ I LV + Q F T +R +R WAK RG+YSN G+ GG+N + VA +
Sbjct: 222 LNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALV 281
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
QLYPNA P+ + +FF V+ WRWPNPV+L + LGLQVW+ + + + P+I
Sbjct: 282 LQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ-AANMRQVAPMI 340
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK-------NEADVD----WDTLFE 319
TPAYP MNS+ +VS TL+I+ +EF RGH I + + K + ADV+ W LFE
Sbjct: 341 TPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPADVESGGMWGELFE 400
Query: 320 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF- 378
P FF AY YL + I+ D + W G+VESRLR+L + + + + P F
Sbjct: 401 PSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFD 460
Query: 379 ---SDKSKPLY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ-AVSMYTLRK 427
+DK+ L +YF+G + + GEQ DI + F++ + +
Sbjct: 461 VCCADKTALLTHAQRANSITYFIGFRVDK--LRMRGEQLDIERQLSNFRKFELGRFHPLV 518
Query: 428 PGMQISVAHVTRRNLPNFVFPG 449
PGM I + LP F G
Sbjct: 519 PGMDILPKSFGVKELPTICFDG 540
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 256/524 (48%), Gaps = 87/524 (16%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------ 60
++ G+T IS A PT+ D+ + L L+D N++E+ E RE VL + V
Sbjct: 9 RQFGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVR 68
Query: 61 ------------------------------HGPGADIDTLCVGPRHATREEDFFGELHQM 90
HGP +DIDTL V P+ + + DFF
Sbjct: 69 RVGKKKGVQQSIIDAAGGKIFTFGSFALGVHGPKSDIDTLVVAPKFVSID-DFFAIFPST 127
Query: 91 LTEM---PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQN 146
E+ ++ E PV DA VP++K ++ GVSIDLL+ L IP ++ + L+
Sbjct: 128 FKELCNEKDIQEFVPVEDAFVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIEKKDLEG 187
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++
Sbjct: 188 LSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIM 247
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYP A + +VS+FF + +W WP PV+L IEEG +GL+VW+P+ D+ HL
Sbjct: 248 VARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHL 307
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-E 325
MPIITPA+P M +++ V STLRIM +EF R I + + N+ DW LFE TFF +
Sbjct: 308 MPIITPAFPSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKK--DWKALFERHTFFTK 365
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH----------- 374
+K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 366 DHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRIT 425
Query: 375 ----------------PGDFSDKSKPL----------YCSYFMGLQRKQGVPVGEG-EQF 407
P +D L ++++GL +P GE +
Sbjct: 426 DDQFKEVAQGSLDYLIPKSEADAEGTLEANGDTTIVHTTTFYIGLT----LPTGEATKSL 481
Query: 408 DIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGG 450
DI V +FK ++ L M + V H LP+ VF G
Sbjct: 482 DISYPVSQFKSYITDSDLYNEDLMSVKVVHTRSSALPDDVFVEG 525
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 202/323 (62%), Gaps = 20/323 (6%)
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
D +L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLGG 63
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 259
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
+D+ HLMPIITPAYP +NSSYNV STL ++ EF RG + +E W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLD--RTLEIETKKFSWAKLFV 181
Query: 320 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--D 377
FF+ K++LR++I+A +A D W GWVESRLR L L++E + ++ HP D
Sbjct: 182 APAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE--ALSDIRIHPFARFFD 239
Query: 378 FSDK--SKP-------LYCSY-FMGLQ--RKQGVPV-GEGEQFDIRLTVKEFKQAVSMYT 424
F D ++P ++ S+ F+GL+ + PV G D+ +++F +
Sbjct: 240 FIDTKDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWE 299
Query: 425 LRKPGMQISVAHVTRRNLPNFVF 447
R GM + + HVTR +P +V
Sbjct: 300 GRHGGMDMQIDHVTRSQIPEWVL 322
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 20/334 (5%)
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
D L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLGG 63
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 259
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
+D+ HLMPIITPAYP +NSSYNV STL I+ EF +G +E ++ W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKS--SWAKLFI 181
Query: 320 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF- 378
FF+ K++LR+ I+A NA+D W GWVESRLR L L++E L+ HP F
Sbjct: 182 APVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLE--ALPELRIHPFARFFD 239
Query: 379 ----------SDKSKPLYCSY-FMGLQRKQGVPVGE-GEQFDIRLT--VKEFKQAVSMYT 424
+ ++ S+ F+GL PV G D+ LT +++F +
Sbjct: 240 FGETKGATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWE 299
Query: 425 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 458
R GM + + HVTR +P +V V + SK
Sbjct: 300 ARHGGMDMQIDHVTRSQIPEWVLESVVNGASDSK 333
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 198/330 (60%), Gaps = 40/330 (12%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
Q LG T +S PT+ DL +++LE L ++++E+ EE R E L RL +
Sbjct: 882 QCLGETGALSFKKPTEQDLKDSQELETTLAQLDIFETPEEITQRREALMRLQEISNKWIK 941
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
V+ GAD+D+L V PR TR+E FF E +
Sbjct: 942 QKAVEQNLPPHVAKATTGKIFTFGSYRLGVNFKGADVDSLLVVPRFITRQE-FFSEFQSV 1000
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNAD 148
L+E P V ++H V DA VPV+K KF GV IDLL+A++ I E+ ++ +++ +++N D
Sbjct: 1001 LSENPHVEDIHAVVDAFVPVLKLKFMGVEIDLLFAQIDQMNIAENFNLCENTEVLMRNMD 1060
Query: 149 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 208
E VRS+NG RV + IL LV +F+ L+ +RFWAKRR +YSN GFLGG++WA+LV+
Sbjct: 1061 EHDVRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVSWAILVS 1120
Query: 209 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLM 267
RICQLYP A PSMLV FF++++QW WP PV L E SL L VWDPR N D+YHLM
Sbjct: 1121 RICQLYPYASPSMLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHLM 1180
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
PI+TP+YP NS+YNV S I+ E ++
Sbjct: 1181 PILTPSYPSQNSAYNVQRSNRIILERELKQ 1210
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 221/409 (54%), Gaps = 44/409 (10%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------ 60
++ G+T IS A PT+ D+ + L L+D N++E+ E RE VL + V
Sbjct: 9 RQFGVTSAISEAPPTEQDIRKNDSLITTLKDENVFETPEGNQQRESVLKDIQNVVEEFVR 68
Query: 61 ------------------------------HGPGADIDTLCVGPRHATREEDFFGELHQM 90
HGP +DIDTL V P+ + + DFF
Sbjct: 69 RVGRKKGVQQPIIDAAGGKIFTFGSFALGVHGPSSDIDTLVVAPKFVSID-DFFALFPPT 127
Query: 91 LTEM---PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQN 146
E+ ++ E PV DA VP++K ++ GVSIDLL+ L IP + L+
Sbjct: 128 FRELCDEKDIQEFVPVEDAFVPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTIDKKDLEG 187
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++
Sbjct: 188 LSESATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIM 247
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 266
VARICQLYP A + +VS+FF + +W WP PV+L IEEG +GL+VW+P+ D+ HL
Sbjct: 248 VARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHL 307
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-E 325
MPIITPA+P M +++ V STLRIM +EF R +I + + N+ DW LFE TFF +
Sbjct: 308 MPIITPAFPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKK--DWKALFERHTFFTK 365
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 374
+K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 366 DHKYYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 262/533 (49%), Gaps = 101/533 (18%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------ 60
++ G+T IS A PT+ D+ KL + L+ N++E+ E REEV+ + +V
Sbjct: 9 RQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEFIR 68
Query: 61 ------------------------------HGPGADIDTLCVGPRHATREEDFFGELHQM 90
HGP +DIDTL V P+ F +H+
Sbjct: 69 RVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPK--------FVAIHEF 120
Query: 91 ----------LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDIS 139
++ + ++ E PV DA VP++K ++ VSIDLL+A L IP ++D
Sbjct: 121 FEFFPPTFREMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTI 180
Query: 140 QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 199
+ L+ E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ G
Sbjct: 181 EKKDLEGLSESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPG 240
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 259
G+ WA++VARICQLYP A + +VS+FF + +W WP PV+L IEEG LGL+VW+P+
Sbjct: 241 GVAWAIMVARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVY 300
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
D+ HLMPIITPA+P M +++ V STLRIM DEF R +I + + DW+ LFE
Sbjct: 301 GGDRAHLMPIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTK--DWNALFE 358
Query: 320 PFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH---- 374
+FF + +K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 359 RHSFFTKDHKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYF 418
Query: 375 ----------------------------PGDFS----DKSKPLY-CSYFMGLQRKQGVPV 401
P D + D + +Y ++++GL +P
Sbjct: 419 ERYHRCKDDQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLT----LPP 474
Query: 402 GEGEQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVR 452
+ DI V +F+ ++ L M + V H LP+ VF PG R
Sbjct: 475 DATKSLDISYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 262/525 (49%), Gaps = 85/525 (16%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------ 60
++ G+T IS A PT+ D+ KL + L+ N++E+ E REEV+ + +V
Sbjct: 9 RQFGVTSAISEAAPTEHDIKLNDKLIETLKAENVFETPEGNRRREEVIEHIQKVVEEFIR 68
Query: 61 ------------------------------HGPGADIDTLCVGPRHAT--REEDFFGELH 88
HGP +DIDTL V P+ +FF
Sbjct: 69 RVGKQKGVQQSVIDAAGGKIFTFGSYALGVHGPSSDIDTLVVAPKFVAIHEFFEFFPPTF 128
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNA 147
+ ++ + ++ E PV DA VP++K ++ VSIDLL+A L IP ++D + L+
Sbjct: 129 REMSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGL 188
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
E RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++V
Sbjct: 189 SESATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMV 248
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
ARICQLYP A + +VS+FF + +W WP PV+L IEEG LGL+VW+P+ D+ HLM
Sbjct: 249 ARICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLM 308
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EA 326
PIITPA+P M +++ V STLRIM DEF R +I + + DW+ LFE +FF +
Sbjct: 309 PIITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTK--DWNALFERHSFFTKD 366
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH------------ 374
+K YL + ++ + + G V+S++R + I+ + P+
Sbjct: 367 HKYYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKD 426
Query: 375 --------------------PGDFS----DKSKPLY-CSYFMGLQRKQGVPVGEGEQFDI 409
P D + D + +Y ++++GL +P + DI
Sbjct: 427 DQFHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLT----LPPDATKSLDI 482
Query: 410 RLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVR 452
V +F+ ++ L M + V H LP+ VF PG R
Sbjct: 483 SYPVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 187/298 (62%), Gaps = 19/298 (6%)
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
GCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
A+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 336
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ + S
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLAS 181
Query: 337 AENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFM 391
A W G VES++R L +E++ + L Q P P + D+ + + +
Sbjct: 182 APTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVI 240
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 442
GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 241 GLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 294
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 224/418 (53%), Gaps = 77/418 (18%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
M +++ ++ G+T PIS A PT ++ L L+ N +ES E R++ L + +V
Sbjct: 1 MAAASVRQWGVTPPISTALPTTSEIAANDDLTTELKQQNNFESPSETERRKQTLHLIQRV 60
Query: 61 ------------------------------------HGPGADIDTLCVGPRHATREEDFF 84
+GPG+DIDTL VGP+H + E DFF
Sbjct: 61 TVEFVKVVSRRKGLSQAAIDIAGGKIFTYGSYRLGVYGPGSDIDTLVVGPKHVSFE-DFF 119
Query: 85 GELHQMLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD 141
+ +L +M + +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+
Sbjct: 120 SDFPPLLEQMAPKGAIEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNK 179
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
+L+ DE+ +R +NG RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+
Sbjct: 180 DLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGV 239
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
WA+LVAR IEEG L ++VW+P+
Sbjct: 240 AWAMLVAR---------------------------------PIEEGPLQMKVWNPKIYHG 266
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+YHLMPIITPAYP M +++NVS ST +++ E +RG +I + + + + W+ LF
Sbjct: 267 DRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQ--LTWNDLFTRH 324
Query: 322 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
TFF + YK YL I S+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 325 TFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDRKS-SIEVAHPFPKGF 381
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 388 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 446
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP V
Sbjct: 452 TYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPEDV 510
Query: 447 FPGG-VRPSRPSKGTWDSRRALERKVSSHT 475
F G VRPSRP K T +K S H+
Sbjct: 511 FQSGEVRPSRPKKKTLKKTEPTAQKRSIHS 540
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 189/314 (60%), Gaps = 17/314 (5%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH PGADIDT+ V P TRE DFF L + + P+VT PV +A VP++ F + G++
Sbjct: 56 VHEPGADIDTIAVAPNICTRE-DFFDSLAERIRRHPDVTNFVPVENAAVPILTFDWEGIN 114
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP----KIQNFR 175
IDLL+ARL+ +P D DI D +L D T +SLNG RVT+ I LV + Q F
Sbjct: 115 IDLLFARLNASSVPRDFDIDNDLVLSGVDSATEKSLNGPRVTNLIAALVSGTDERYQTFL 174
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW 235
T +R +R WAK RG+YSN G+ GG+N + VA + QLYPNA P+ L+ +FF V+ WRW
Sbjct: 175 TVVRLVRKWAKARGLYSNKMGYWGGVNINIAVALVLQLYPNACPASLLRKFFLVFKSWRW 234
Query: 236 PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEF 295
PNPV+L + LGL VW+ + + + P++TPAYP MNS+ +VS TL+I+ +EF
Sbjct: 235 PNPVMLTKPHDAELGLPVWNSFQ-AANMRQVAPMVTPAYPAMNSTLSVSRQTLQILHEEF 293
Query: 296 QRGHEICEAM----EKNEADVD-------WDTLFEPFTFFEAYKNYLRIDISAENADDLR 344
RGH + + + +K D D W LFEP FF Y YL + I + D +
Sbjct: 294 CRGHNVVDKLYKDFQKGALDKDKIESGDIWKELFEPSDFFIGYPYYLSLCIVGPSQADAQ 353
Query: 345 NWKGWVESRLRQLT 358
W G+VESRLR+L
Sbjct: 354 AWAGFVESRLRKLV 367
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 211/370 (57%), Gaps = 37/370 (10%)
Query: 29 RKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----------------------------- 59
+K+ +YL+ +E + E++ RE VLG L
Sbjct: 14 KKVVEYLQTKGFFEDENESIQRERVLGMLSNLVNKFIMDIAKRNEIPIDSKSLSKIFTFG 73
Query: 60 -----VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFK 114
VH GADIDTLCV P +R E FF + L +TE+ V + VP++KFK
Sbjct: 74 SYRLGVHSSGADIDTLCVVPNFVSRNE-FFTVFYDELCSKSYITEISKVTNTFVPLIKFK 132
Query: 115 FSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 174
+ IDL++AR+ L IP ++D+ + +L++ E+ + SLNG RVTD+IL VP I+ F
Sbjct: 133 IKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILAQVPNIETF 192
Query: 175 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR 234
TLR M++WA++R VY + G++GG+ +AL VA++CQ+YP+A + +FF V+++W
Sbjct: 193 HKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPSADAFKTIEKFFEVFSKWA 252
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
WP PV++ + + + L+VW+P+ N K MP+ITP YP + S++N++TSTL +M E
Sbjct: 253 WPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHNITTSTLFVMKRE 312
Query: 295 FQRGHEI-CEAME-KNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 352
FQRG I E+++ K E D L E FF +K Y I ++ +N+ + + G+ E+
Sbjct: 313 FQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNSKEFGRFMGFAET 372
Query: 353 RLRQLTLKIE 362
R+R K+E
Sbjct: 373 RVRMFAQKLE 382
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 217/399 (54%), Gaps = 18/399 (4%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMP--EVTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D + P T + F +L+ L+ +P ++T+L + A VP++ FK +GV ID
Sbjct: 239 SDLDIVAFAPNFVTLD-CFLTDLYVYLSNLPNSKITKLVAMKKATVPILAFKLNGVHIDF 297
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
L AR + +P L I D IL D ++RS++ RV+ +L LVPK FR+ +R +R
Sbjct: 298 LLARSTELKVPTHLPICCDEILSGMDSISIRSMSIARVSSLVLELVPKGCAFRSFVRIIR 357
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC 242
WAKRRG+YSN GFLGGI+W LL ICQ+ P A S+L+ RFF V+++W WP PV +
Sbjct: 358 LWAKRRGIYSNKTGFLGGISWTLLAVFICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIA 417
Query: 243 AIEEGSL---GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
G+ G+Q W P+ N D+ HLMPIITP YP +NS+ NV+ +TLRIM +EFQRG
Sbjct: 418 RPYLGNAEADGVQ-WCPQTNHHDRAHLMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGR 476
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
I E + + A +W LF P F Y NYL + + A N +DL W ++ SRLR+L
Sbjct: 477 YIVEEITEKYAFGNWQNLFTPSEFLVRYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVE 536
Query: 360 KIERHTYNMLQCHPHPGDFSDKSKPLYCS---YFMGLQ---RKQGVP----VGEGEQFDI 409
+E + HP+P P + Y +G + RK+G E + +
Sbjct: 537 SLEV-AIPIRSVHPYPVLMPGTQDPGVNASGYYLLGFEVENRKRGCKSNTLCEEAKACTV 595
Query: 410 RLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 448
V T RKPGM+I + + LP V P
Sbjct: 596 SAMRYFIATEVDQCTERKPGMKIDLQYANWNALPLCVLP 634
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/288 (46%), Positives = 175/288 (60%), Gaps = 37/288 (12%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS A T+ + T L + LR +ES+EEA +RE VLGR+
Sbjct: 3 GVTPPISTAESTEREKEVTESLMEELRQQGTFESEEEAQTRELVLGRVSALVKKFVKKVG 62
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGP +DIDTLCV P+H RE DFF ML E
Sbjct: 63 MARGLSEAAATAAGGKIFTFGSYRLGVHGPSSDIDTLCVVPKHVQRE-DFFEVFEPMLRE 121
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
TE+ VP+A+VP++ SG+ +D L ARL+L IPEDL + D++L+N DE+ VR
Sbjct: 122 FEGATEVAGVPEAYVPIITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDERCVR 181
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SL G RV ++ILRLVP +Q FR +LRC++ WA+RR +YSNV GF GG+ WA++VARICQL
Sbjct: 182 SLGGSRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVARICQL 241
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
YPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ K
Sbjct: 242 YPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPKVRVK 289
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 201/341 (58%), Gaps = 18/341 (5%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
H P +DID LCVGP AT EDFF LH +L PE++E+H V D+ VP+M+F F G+S+
Sbjct: 63 HDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDSKVPLMRFTFDGISV 122
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
DL YA+L + +PE++DI S+L N DE + +SL+G R +IL LVP + NF++ LRC
Sbjct: 123 DLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILLLVPNLMNFQSMLRC 182
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WAKRRGVY N+ GFLGG++ A+L A +CQ PNA L+S FF Y W WP PV+
Sbjct: 183 LKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPNASVIALISNFFSTYAMWPWPTPVM 242
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
L + + V D + MPI P P NV+ ST + EF RGH
Sbjct: 243 L----QDGMSSNVED----VIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAEFLRGHS 294
Query: 301 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 360
+ + K + D D +FEPF + Y +++I +SA + D+L +W GWV+S R L LK
Sbjct: 295 MTRDLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLK 354
Query: 361 IERHTYNMLQ--CHPHPGDFS--DKSKPLYCSYFMGLQRKQ 397
+E +Q C P+P ++ D S+P ++ GL R +
Sbjct: 355 LE-----AVQGFCDPNPMEYVDMDASEP-NVVFYWGLNRSR 389
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 119 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR L
Sbjct: 50 SIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLAL 109
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 238
R ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+ QW+WP P
Sbjct: 110 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQP 169
Query: 239 VLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
VLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +++ E +RG
Sbjct: 170 VLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRG 229
Query: 299 HEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQL 357
+I + + + + W+ LF TFF + YK YL I ++ + D W G VES+LR L
Sbjct: 230 GDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHL 287
Query: 358 TLKIERHTYNMLQCHPHPGDF 378
++R + ++ HP P F
Sbjct: 288 VGALDRKS-SIEIAHPFPKGF 307
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 374 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 431
HP D LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 365 HPN--GDNGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 421
Query: 432 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 490
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 422 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 468
Query: 491 NVDTHLRNAKCHAT---MPSSSG 510
N AK HA+ MPS++
Sbjct: 469 NEAPSENPAKRHASPNGMPSAAA 491
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 221/405 (54%), Gaps = 44/405 (10%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T P+S PT D T +L ++ + ES + R EVL +++
Sbjct: 36 GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVS 95
Query: 60 -------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 100
V P +DIDTL + P +R++ F + ML P VTE
Sbjct: 96 AGEIQSKARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNRSPHVTEC 155
Query: 101 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 160
+PVP AHVP++K K+ G+ +D+L A + V+ D+D Q+ ++ + +++ ++S+NG RV
Sbjct: 156 NPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMKSMNGIRV 215
Query: 161 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
D++L LV Q FR R +++WA++R +YSN G++GG++WA++V R+CQLYPN
Sbjct: 216 ADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQLYPNYSAK 275
Query: 221 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 280
+V RFF VY +W+W + G+ + + RR D++H+MP+ITP +P N++
Sbjct: 276 QIVERFFFVYARWQW-----TATRDYGNSNVPL---RRYTSDRHHVMPVITPIFPTHNTT 327
Query: 281 YNVSTSTLRIMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFTFFEAYKNYLRI 333
YNV S R+++ E +RG EI E M N++ +V W L PF FF+ Y+ +L +
Sbjct: 328 YNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLL 387
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
+ISAE +KG VESR+R L +E + + PHP F
Sbjct: 388 EISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHPVMF 432
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 239/456 (52%), Gaps = 55/456 (12%)
Query: 21 TDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------------------- 59
T+ + K+ +YL +E + E++ RE VLG+L
Sbjct: 6 TETERTNDEKVVEYLHSKGFFEDESESIQRERVLGKLSNLVNKFIMDIAKRNQIPIDKKS 65
Query: 60 -------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDA 106
VH GADIDTLCV P +R E FF + L +TE+ V +
Sbjct: 66 LSKIFTFGSYRLGVHSSGADIDTLCVVPNFVSRNE-FFTTFYDELCSKDYITEISKVTNT 124
Query: 107 HVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILR 166
VP++KFK + IDL++AR+ L I ++D+ + +L++ E+ + SLNG RVTD+IL
Sbjct: 125 FVPLIKFKIKTIPIDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLNGNRVTDEILA 184
Query: 167 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 226
VP I F TLR +++WA++R VY + G++GG+ +AL VA++CQLYP A + +F
Sbjct: 185 QVPNISTFHKTLRFIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPGADAFETIEKF 244
Query: 227 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 286
F V+++W WP PV++ + + + L+VW+P+ NP+ K MP+ITP YP + S++N++ S
Sbjct: 245 FDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHNITNS 304
Query: 287 TLRIMMDEFQRGHEI-CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 345
TL + EF RG I E +K + D L E FF +K Y I ++ +N +
Sbjct: 305 TLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPKEFSR 364
Query: 346 WKGWVESRLRQLTLKIERHTYNMLQCHPHPG-----DFSDKSKPL------------YCS 388
+ G+ E+R+R K+E + N+ + P D + K+ PL + +
Sbjct: 365 FMGFAETRVRMFAQKLE-NIENIEYAYTFPKKYILEDVTSKNVPLLKELKCGDDSYAFGA 423
Query: 389 YFMGLQRKQ-GVPVGEGEQFDIRLTVKEFKQAVSMY 423
+F+G+ +P+ ++ +++ V EFK ++ Y
Sbjct: 424 FFIGIDFSTVKLPLNASKKMNLKKPVLEFKSSLETY 459
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 192/328 (58%), Gaps = 40/328 (12%)
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LV
Sbjct: 2 DHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLV 61
Query: 208 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
AR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH M
Sbjct: 62 ARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHPM 121
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 327
PIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y
Sbjct: 122 PIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRY 179
Query: 328 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK------ 381
++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 180 RHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSAN 238
Query: 382 -----------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
S P +F+GL+ ++ E D+ +++ F +
Sbjct: 239 NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTE 294
Query: 419 AVSMY----TLRKPGMQISVAHVTRRNL 442
V M+ + K GM I HV R+ L
Sbjct: 295 HVMMHGVNIKMLKEGMTIDARHVKRKQL 322
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 176/284 (61%), Gaps = 37/284 (13%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 176/284 (61%), Gaps = 37/284 (13%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRVLILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 176/284 (61%), Gaps = 37/284 (13%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 7 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 66
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 67 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 125
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 126 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 185
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 186 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 245
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 246 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 176/284 (61%), Gaps = 37/284 (13%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
YPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 260 YPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 216/391 (55%), Gaps = 69/391 (17%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---------- 58
+G+T ISLA P +D +T +L+K L N++E + + R E+L +L+
Sbjct: 179 MGMTSAISLAEPKKEDHTKTVELQKALEPYNVFEDESKLNHRMEILSKLNTLVKQWVRNV 238
Query: 59 --------------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+ G +ID LCV PR+ R+ D+FG ++L
Sbjct: 239 SISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCVAPRNIERQ-DYFGSFFELLK 297
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ PE V +A VPV+K KF G+ IDLL+ARL+L IP+ D+ +D +L+N D + V
Sbjct: 298 KQPEY---RAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDKFDLREDMLLKNLDPKLV 354
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
RSLNGCR TD+ILR VP I NFR L + G+YSN G+ GG++WA+LVAR CQ
Sbjct: 355 RSLNGCRATDEILRPVPNIDNFRLAL--------QHGIYSNSLGYFGGVSWAMLVARTCQ 406
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
L N V + V + F V+++W+ +LG Q+WDPR N + ++HLM IITP
Sbjct: 407 LL-NVVAATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQGQFHLMSIITP 455
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS+++VS ST ++M++EF RG +I + + ++A WD L ++
Sbjct: 456 AYPQQNSTFHVSRSTRKVMLNEFNRGMQITDEIMLDKA--GWDKLIATLSYSTL------ 507
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIER 363
+++ N DD W G VES++R L +ER
Sbjct: 508 --VTSNNTDDHLEWCGLVESKIRYLIQNLER 536
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 240/480 (50%), Gaps = 47/480 (9%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD-------------- 58
+P + GPT +L + +L++++ + ++E+ R+EVL ++
Sbjct: 10 KPQTEEGPTGAELQASIELQRFIDKYDAPATEEQKTKRQEVLSKIKILINEFVRIIAKKT 69
Query: 59 ----------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
V G+DID + V P R DFF ++M+ P
Sbjct: 70 GNTAEGLENVESQLVPYGSYRLGVVSEGSDIDCIVVAPSFVKRS-DFFNTFYEMMINHPS 128
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
V EL V +A+ P+M F + G+ IDL +A L++ + ED D + D IL N DE++VRSLN
Sbjct: 129 VKELVKVENAYSPIMSFHYDGIEIDLSFASLAMTTVAEDTDFADDHILDNVDEESVRSLN 188
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
G RV D +L+LVP FR LR +R WAK+R VY NV G+LGG+N A+L A ICQ YP
Sbjct: 189 GRRVNDMLLQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVNLAILAAFICQRYPK 248
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
P+ ++ FF W WP P+ + G+ WDP R +D MPIITPAYP
Sbjct: 249 KSPAYIIVMFFNDLATWTWPEPIYINTPTTGNRS--NWDPTRQ-QDHKDCMPIITPAYPT 305
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 336
+NS ++ + S+ M EF+RG ++ A K+EA W+ + + FF ++ ++ + +
Sbjct: 306 INSLHSATKSSRNRMTVEFKRGFKVASACLKSEA--SWERIIDSPKFFVRHRKFVEVLVV 363
Query: 337 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK--PLYCS-YFMGL 393
A + +V+SR+R L + IE ++ + P +F +CS +++GL
Sbjct: 364 ATEEKVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYRGNEFCSVFYIGL 423
Query: 394 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
VP E + + LT K + P + + V ++LP+F+FP G RP
Sbjct: 424 SYH--VPKDENQSRTLDLTSPAKKWVDDIRQKAPPNADVILDVVDTKDLPSFLFPNGERP 481
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 211/389 (54%), Gaps = 44/389 (11%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T P+S PT D T +L ++ + ES + R EVL +++
Sbjct: 36 GVTPPVSENYPTRADYEATEELRHFIENRAPPESSHGMLKRYEVLVEIERMVNKWIYDVS 95
Query: 60 -------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 100
V P +DIDTL + P +R++ F + ML P VTE
Sbjct: 96 AGEIQSKARVLTFGSFRLGVITPMSDIDTLVLLPNSISRDDFFTDFVETMLNRSPHVTEC 155
Query: 101 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 160
+PVP AHVP++K K+ G+ +D+L A + V+ D+D Q+ ++ + +++ ++S+NG RV
Sbjct: 156 NPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEKRCMKSMNGIRV 215
Query: 161 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
D++L LV Q FR R +++WA++R +YSN G++GG++WA++V R+CQLYPN
Sbjct: 216 ADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGRVCQLYPNYSAK 275
Query: 221 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 280
+V RFF VY +W+W G RR D++H+MP+ITP +P N++
Sbjct: 276 QIVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPVITPIFPTHNTT 327
Query: 281 YNVSTSTLRIMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFTFFEAYKNYLRI 333
YNV S R+++ E +RG EI E M N++ +V W L PF FF+ Y+ +L +
Sbjct: 328 YNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLL 387
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIE 362
+ISAE +KG VESR+R L +E
Sbjct: 388 EISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 190/272 (69%), Gaps = 6/272 (2%)
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVR 153
+T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++L+ DE+ +R
Sbjct: 7 ITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELR 66
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
S+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQL
Sbjct: 67 SVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQL 126
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 273
YP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+YHLMPIITPA
Sbjct: 127 YPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPA 186
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLR 332
YP M +++N++ S+ ++ E + ++ + + + W LF+ TFF + +K Y++
Sbjct: 187 YPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTFFTKDFKYYIQ 244
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ ++++ + + W G+VES++R L +ERH
Sbjct: 245 VIAASKDKESHKLWSGFVESKVRLLVQGLERH 276
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 152/481 (31%), Positives = 245/481 (50%), Gaps = 48/481 (9%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
+ + +P+S A PT D+ +RKL ++L E R+ V + +
Sbjct: 15 IPLYKPVSEAEPTPIDIEASRKLVEFLDSAGAIADAEAMKHRQAVFETVSKIVDQFIEKV 74
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V P +DID + + P+ +EE FF +++L
Sbjct: 75 RVNKKMEPPEGEVYKGKLFYSGSYKLGVCSPKSDIDCVILAPQFVQKEE-FFSIFYELLA 133
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+V L V +A+VP++K + + D+ +A L L I +D+D+S DS+L+N + +V
Sbjct: 134 ADTKVKGLIKVEEAYVPIIKLTYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSKLSV 193
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
R+LN RV + +++LVP + NF+T L+ +R+WA +RG+Y NV G+ GG+N A+L A +CQ
Sbjct: 194 RALNSLRVNNMVIKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAFVCQ 253
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
YP A P+ML FF +QW WP P+ + G L WDP D +MPIITP
Sbjct: 254 RYPTASPAMLALYFFSEISQWTWPTPIYINRPNYGE--LLSWDPTTE-SDHNDVMPIITP 310
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
AYP NS + +TS+ ++ E + +I + D+ W + E FFE+YKNY+
Sbjct: 311 AYPSTNSQRSATTSSRNRIIQEMVKALQIMPNIIT--GDLPWSAVCEDHEFFESYKNYIE 368
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP-HPGDFSDKSKPLY-CSYF 390
IDI AE D WKG V S++++L +E ++C P P F ++ Y S F
Sbjct: 369 IDIRAEGLADYNWWKGTVISKVKRLITSLE--AIERVKCAPIFPSSFDRENNNKYQGSIF 426
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT-RRNLPNFVFPG 449
+GL+ ++ EG++ + +K++ + + T R +I V R+ +P+F FP
Sbjct: 427 IGLETEK-TKDDEGKKVNPSAAIKKYLEEIYKLTNRPLSTKIENPQVINRKKIPDFCFPN 485
Query: 450 G 450
G
Sbjct: 486 G 486
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 232/454 (51%), Gaps = 77/454 (16%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
P +DID +CV P H T +DFF +L + P V+ L PVP+A+VP++ F GV +DL
Sbjct: 538 PNSDIDAVCVAPWHVT-HDDFFSSFCHLLEQTPGVSHLAPVPNAYVPLISLSFLGVRMDL 596
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
L+ARL + + + +I D +L E ++++LN RV+ +L LVP+ + +R LR +R
Sbjct: 597 LFARLPVSSVEPNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVR 656
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC 242
WA+RRG+YS G+LGGI+WA+LVA +CQLYPNA P+ + RFF+V ++W+WP PV+L
Sbjct: 657 AWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLN 716
Query: 243 AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC 302
I + LG +WDPR++ D+ H+MPIITPAYP MNSS VS T ++ +E R +
Sbjct: 717 MIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQPTFSVIYEELWRARYLA 776
Query: 303 E--------------AMEKNEADVD----------------------------------- 313
E + E +EAD+
Sbjct: 777 EIAVGISKPFPTAAPSPESSEADLKAAVVCMATSMPSFDQPLNAVDSTEGVVQTTQGFGE 836
Query: 314 ---WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 370
WD LF+P FF Y +Y+ + A + + W +V+SRLR+L + H + +
Sbjct: 837 GSAWDKLFQPSNFFIRYSSYMVFNFQAASESAMHKWGKFVQSRLRKLVDNLH-HMSPVSR 895
Query: 371 CHPHPGDF-----SDKSKPLYCSYFMGLQ----RKQGVPVGEGEQFDIRLTVKEFKQAVS 421
H P F +++ P C F+G++ R Q + + + K +QA+
Sbjct: 896 VHAFPRYFPHTCDAERRGPGSC-MFIGIEFHYRRHQTIQPKDDPEVK-----KTLEQAIR 949
Query: 422 MYTL--------RKPGMQISVAHVTRRNLPNFVF 447
+ ++P M ++ LP FVF
Sbjct: 950 FFLATDLQQMEDKQPDMTADAKVLSWEELPEFVF 983
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 241/512 (47%), Gaps = 125/512 (24%)
Query: 3 SSNGQ--RLGITEPISLAGPTDDDLMRT-----------------RKLEKYLRDVNLYES 43
S NG+ LG+T PISL P + D+ + + + K++ DV++
Sbjct: 2 SGNGEVRMLGVTPPISLDPPKEADVKASEVRVGAGAQSPLLSNIAQLVTKFVHDVSIKNG 61
Query: 44 QEEAVSREEVLGRLDQ------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 97
E V+ E GR+ VHGPG+DIDT+CV P+H RE FFGE QML + P
Sbjct: 62 LSEKVAT-EAGGRIYTSAFRLGVHGPGSDIDTICVCPKHVYREH-FFGEFQQMLRDWPAC 119
Query: 98 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG 157
TE+ A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+ + RSLN
Sbjct: 120 TEIS---SAFVPVMKTVISGVEVDLLFARVNLPEAGDKLDIEKDEILRGVDDASQRSLN- 175
Query: 158 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 217
VTD IL LVP + FRT LR +R WAK F GG+ WALL ARICQLYPNA
Sbjct: 176 --VTDMILNLVPDVATFRTALRTIRLWAK---------SFPGGVAWALLTARICQLYPNA 224
Query: 218 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 277
PS +VS+FF +Y QW MP+ITPAYP M
Sbjct: 225 APSTIVSKFFPIYYQW---------------------------------MPVITPAYPSM 251
Query: 278 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 337
S++N++ ST+ I+ +E R + N W LF P FF Y+ Y+++ SA
Sbjct: 252 CSTHNITQSTMTIIKNEMLRDKIV------NNPGSSWVELFTPVDFFSLYRTYVQVVASA 305
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--------------------- 376
+A DL++W LR L +E T N+L HP
Sbjct: 306 SSAQDLKDW-------LRTLVQDLE-MTDNVLLAHPQVNGISKTYICLTEEEQAQASQGE 357
Query: 377 -----------DFSDK--SKPLYCSYFMGLQRKQGVPVGEG-EQFDIRLTVKEFKQAVSM 422
D++DK +K ++F+GL ++ G+ Q ++ K F A
Sbjct: 358 LPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKDGQQPRQLNLYYASKRFCFACQS 417
Query: 423 Y-TLRKPGMQISVAHVTRRNLPNFVFPGGVRP 453
+ + M + + R LP F FP G P
Sbjct: 418 WDKYNEQDMSVILRPCKRSELPAFCFPDGQPP 449
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 171/272 (62%), Gaps = 7/272 (2%)
Query: 56 RLDQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKF 115
RLD VH PGAD+DT+ + RH R+ D F +L+ + ++T L V +A VPV+KF+
Sbjct: 60 RLD-VHLPGADMDTVMIVTRHIHRD-DMFNDLYVAMQARKDITNLIKVQEARVPVIKFQM 117
Query: 116 SGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFR 175
DL ARLS IPED D++ D L+N D+Q+V SLNG RVTD I LVP ++ +
Sbjct: 118 DEFEFDLAMARLSYATIPEDFDVTDDKHLKNVDQQSVTSLNGVRVTDTIRSLVPTMKTLK 177
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW 235
+R ++ WAK+RGVY NV GFLGGI+ ++ ARI QLYP A+PS L+ FF Y+QW+W
Sbjct: 178 YCIRALKLWAKKRGVYKNVLGFLGGISLEIMAARIGQLYPKALPSRLLYFFFFTYSQWKW 237
Query: 236 PNPVLLCAIEEGS--LGLQVWD-PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 292
P PV L + S L L VW D+ HLMPIITP YP N++ NVS STL++M
Sbjct: 238 PQPVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQNATANVSKSTLKVMQ 297
Query: 293 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
+EF R +IC+ + E + +W LFEP F
Sbjct: 298 EEFTRAKDICKQIL--EGNAEWSDLFEPLDPF 327
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/371 (34%), Positives = 215/371 (57%), Gaps = 26/371 (7%)
Query: 59 QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 118
+V+ +DID +C P ++ FFG+L +L++ EV ++ + VP++K ++ G+
Sbjct: 104 KVNQKNSDIDAVCFVPSFVECKKHFFGDLFHILSQKKEVEDIFSIQHTSVPLIKMRYFGI 163
Query: 119 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
D+ +++ S DLDI ILQ DE+++R+LNG RV + + + F+ L
Sbjct: 164 PFDISFSKQSQSQFKSDLDIKSIQILQGMDEKSIRALNGYRVAEWFNQNIKNKDTFKKAL 223
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN- 237
+C++ WA+ R +YSN+ G+L GI W++LVA+ICQLYPN ++ RFF +Y++W+W +
Sbjct: 224 KCIKLWAQNRCIYSNILGYLNGIAWSILVAKICQLYPNYFVYGIIERFFFLYSRWKWHDM 283
Query: 238 PVLLCAIEEGSLGLQVWDPRRNPKDK-YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
V + I+E + + P++K M IITP +PC+N +YNV+ STLR++ ++FQ
Sbjct: 284 AVQIEYIQEDIYNQMICGNQWVPENKGISNMMIITPCFPCINCAYNVTESTLRVIQEQFQ 343
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 356
G+ I + ++KN++ D+ LF+PF FF+ Y +L+I I A+N ++ WKG VE LR+
Sbjct: 344 YGYRILDEIQKNQSHYDYQDLFKPFEFFKRYNAFLQIRILAKNKNEYFQWKGHVEINLRK 403
Query: 357 LTLKIERHTYN-MLQCHPHP-----------GDFSDKSKPLYCSYFMGLQRKQGVPVGEG 404
LT IE + ++ HP GD+S L C YF G++ K
Sbjct: 404 LTKIIENGKLSKIILIHPFSKFIDLCLKEQLGDYS-----LGCVYFYGIKVKDN------ 452
Query: 405 EQFDIRLTVKE 415
Q DI+++ +E
Sbjct: 453 -QNDIQISFEE 462
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 223/423 (52%), Gaps = 40/423 (9%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 124
+D+D + P H E FF L + L + V++L A VPV+ F+ + V IDLL+
Sbjct: 231 SDLDVVAFMP-HTVTAEIFFSSLCEHLGQESSVSDLVARRKAAVPVLSFQLNSVRIDLLF 289
Query: 125 ARLSLW-VIPEDLDI---SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
AR + +P+ L +++ D +VRSL+ RV IL LVP +R+ LR
Sbjct: 290 ARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRV 349
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
+R WA+RRG+YSN AGFLGGI+WA+LV +CQ++P A + LV RFF V WRWP P+L
Sbjct: 350 IRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPIL 409
Query: 241 LCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
+ G Q WDP+ N D+ HLMPIITP +P +N++ NV+ STLR++ +EF RG
Sbjct: 410 VAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARG 469
Query: 299 HEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 356
I + + + W+ LF P Y +++ I++ A N + L W +V SR R+
Sbjct: 470 QRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRK 529
Query: 357 LTLKIERHTYNMLQCHPHP------GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIR 410
L ++ HT ++ HP P G +D+S + +F+G P + + D R
Sbjct: 530 LVETLQ-HTPSISALHPLPDLVRAQGHETDESDAVVGYFFIGYTVNVP-PTPQPRRGDRR 587
Query: 411 LTVKE-----------FKQAVSMYTL------------RKPGMQISVAHVTRRNLPNFVF 447
+ + K +V+ T +KPGMQ+ + + + +LP+ +F
Sbjct: 588 HSARSPVITKNSQEELAKNSVASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSAIF 647
Query: 448 PGG 450
PGG
Sbjct: 648 PGG 650
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 226/425 (53%), Gaps = 44/425 (10%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 124
+D+D + P H E FF L + L + V++L A VPV+ F+ + V IDLL+
Sbjct: 231 SDLDVVAFMP-HTVTAEIFFSSLCEHLGQESSVSDLVARRKAAVPVLSFQLNSVRIDLLF 289
Query: 125 ARLSLW-VIPEDLDI---SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
AR + +P+ L +++ D +VRSL+ RV IL LVP +R+ LR
Sbjct: 290 ARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSVARVASLILELVPNASVYRSCLRV 349
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
+R WA+RRG+YSN AGFLGGI+WA+LV +CQ++P A + LV RFF V WRWP P+L
Sbjct: 350 IRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRASVASLVHRFFSVLATWRWPTPIL 409
Query: 241 LCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
+ G Q WDP+ N D+ HLMPIITP +P +N++ NV+ STLR++ +EF RG
Sbjct: 410 VAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNTAVNVNISTLRVLREEFARG 469
Query: 299 HEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 356
I + + + W+ LF P Y +++ I++ A N + L W +V SR R+
Sbjct: 470 QRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRAPNEEALAEWSSFVASRTRK 529
Query: 357 LTLKIERHTYNMLQCHPHP------GDFSDKSKPLYCSYFMGL--------QRKQG---- 398
L ++ HT ++ HP P G +D+S + +F+G Q ++G
Sbjct: 530 LVETLQ-HTPSISALHPLPDLVRAQGHETDESDAVVGYFFIGYTVNVPSTPQPRRGDRRH 588
Query: 399 ---VPV-GEGEQFDIRLTVKEFKQAVSMYTL---------RKPGMQISVAHVTRRNLPNF 445
PV + Q ++ K + + Y L +KPGMQ+ + + + +LP+
Sbjct: 589 SARSPVITKNSQEEL---AKNSVASATRYFLATELNTAAEKKPGMQVDINYRSWNDLPSA 645
Query: 446 VFPGG 450
+FPGG
Sbjct: 646 IFPGG 650
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 196/383 (51%), Gaps = 66/383 (17%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD-------------- 58
EPI+ + P+ DL KLE ++RD + + RE+VLG++
Sbjct: 30 EPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEA 89
Query: 59 ----------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
++H P +DID +CV P+ T E FF L + L P
Sbjct: 90 GMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSEL-FFTTLKERLIAHPL 148
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
V ++ + A VP+++ F + IDL A L + +P LDI D
Sbjct: 149 VANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQ-------------- 194
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
VP +F +RC+R WAK RG+YSN G+LGG+N+ ++VA CQ+YPN
Sbjct: 195 -----------VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPN 243
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
A PS L+ RFF++ W WPN + L + LGL+VW+ R N +H MPIITPAYP
Sbjct: 244 AGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPV 300
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD-WDTLFEPFTFFEAYKNYLRIDI 335
MNSS NVS TL +M EF RG E+ + K + + + LFEP FF Y +YL +D+
Sbjct: 301 MNSSANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDM 360
Query: 336 SAENADDLRNWKGWVESRLRQLT 358
A + D+ R W GWVESRLR++T
Sbjct: 361 MASSEDEHRAWVGWVESRLRKVT 383
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 232/431 (53%), Gaps = 27/431 (6%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+G +DID LC+GP A+ EDFF L ML EV+E+H V DA VP+++FKF G+
Sbjct: 88 VYGSESDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLIRFKFDGIL 147
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+DL YA+L + IP ++D+ L++ DE + +SL+G R IL+LVP ++ F++ LR
Sbjct: 148 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLR 207
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++ WAKRRGVY N+ GFLGG++ A+L A +C NA S L++ FF ++ W+WP PV
Sbjct: 208 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPV 267
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+L + G P LMPI P + N++ ST +M EF RGH
Sbjct: 268 VLLEDTYPATGA--------PPG---LMPIQLPCGSHQYCNSNITRSTFYKIMAEFLRGH 316
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ + K + W LFE + + Y + +I +SA N +DL +W GWV+SR R L
Sbjct: 317 NLTKDYLK--PNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLS 374
Query: 360 KIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
KIE Y + C P+P ++ + +K ++ GLQ + + V DI EF +
Sbjct: 375 KIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVS-----DIESVETEFLK 425
Query: 419 AVSMYTLRKPGMQISVAHVTRRNLP-NFVFPGGVRPSRPSKGTW---DSRRALERKVSSH 474
++ + + P +I ++ V LP N R + +K W ++++ V SH
Sbjct: 426 NLNSGSFQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRIRENKQCNNVPVYSH 485
Query: 475 TKPGADDGRKR 485
PG G ++
Sbjct: 486 HLPGYVVGYQK 496
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 237/402 (58%), Gaps = 27/402 (6%)
Query: 59 QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 118
+V+ G+DID +C+ P + RE++FFG+L +L++ E+TEL P+ +A VP++K +F G+
Sbjct: 103 KVNSRGSDIDAVCLCPFYVEREKNFFGDLVHILSQKKEITELFPIQEASVPIIKMQFQGI 162
Query: 119 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL--VPKIQNFRT 176
DL +AR + +D++ + +L DE++ +S NG RV + + + + +NF++
Sbjct: 163 LFDLSFARAPTQFQSDKIDLTSNQMLLGMDERSCKSFNGYRVAEWLSKKENIQNYENFQS 222
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWP 236
L+C++ WA+ RG+YSN+ G+L GI W +LV++ICQL+PN + L+ RFF +Y++WRW
Sbjct: 223 ILKCIKLWAQNRGIYSNIIGYLSGIGWTILVSKICQLFPNYSLNQLLERFFFLYSRWRWQ 282
Query: 237 N-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEF 295
+ PV + I + ++ + P+ K +M IITP +PCMN ++NVS++TLRI+ ++
Sbjct: 283 DFPVQVEYIVDDVANSKLSADQWRPEYKSSMM-IITPCFPCMNCAHNVSSTTLRIIQEQL 341
Query: 296 QRGHE-ICEAM--EKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 352
G+E IC+ KN +D LF+ F FF+ YK++L I I A N +D WKG VES
Sbjct: 342 WHGYETICKIQNGSKNYSD-----LFKSFKFFKKYKHFLEIKILATNKNDYTVWKGHVES 396
Query: 353 RLRQLTLKIERHTY-NMLQCHPHPG---DFSDKSK------PLYCSYFMGLQRKQGVPVG 402
LR+LT E Y N+L+ HP+P +F D ++ C Y+ GL Q
Sbjct: 397 GLRKLTRLFESPQYMNLLEVHPYPSYIENFLDDTQSQKNKYKFQCKYYYGLMCLQS---E 453
Query: 403 EGEQFDIRLTVKEFKQAVSMYTLRK--PGMQISVAHVTRRNL 442
E +++ F + + MY + K M I +H+ R L
Sbjct: 454 NNESINLKEACVYFVEQLEMYPMNKVLESMNIQCSHLLRSEL 495
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 218/422 (51%), Gaps = 39/422 (9%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 124
+D+D + P HA E FF L + L + V++L A VPV+ F+ S V +DLL+
Sbjct: 250 SDLDVVAFMP-HAITSEIFFSSLCEHLGKEASVSDLVARRKAAVPVLSFQLSSVRVDLLF 308
Query: 125 ARLSL-WVIPEDLDI---SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
AR + +P+ L +++ D +VRSL+ RV IL LVP FR+TLR
Sbjct: 309 ARYAQKQAVPKHLPFLPGDDVQVMRGMDATSVRSLSVARVASLILELVPNASVFRSTLRV 368
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
+R WA+RRG+YSN AG+LGGI+WALLV +CQ++P A + LV RFF V WRWP P+L
Sbjct: 369 IRLWARRRGLYSNKAGYLGGISWALLVCFVCQMFPRASVASLVHRFFSVLASWRWPTPIL 428
Query: 241 LCAIEEGSL---GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
+ G G+Q WDP N D+ HLMPIITP +P +N++ NV+ STLR++ +EF R
Sbjct: 429 VAHPSNGGKVDNGVQ-WDPAHNIHDRAHLMPIITPGFPAVNTAVNVNLSTLRVLREEFAR 487
Query: 298 GHEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLR 355
G I + + + W+ LF P Y +++ I++ A N + L W +V SR R
Sbjct: 488 GQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHIAIELRAPNEEALAEWSSFVASRTR 547
Query: 356 QLTLKIERHTYNMLQCHP-----HPGDFSDKSKPLYCSYFMGL-------------QRKQ 397
+L ++ HT ++ HP P K + YF+G +R+
Sbjct: 548 KLVETLQ-HTPSVATLHPLPEIVRPQAAQAKEDEVVGYYFIGYTINTPPLPQPRRGERRH 606
Query: 398 GVPVGEGEQFDIRLTVKEFKQAVSMYTL---------RKPGMQISVAHVTRRNLPNFVFP 448
+ K + + Y L +KPGM++ + + + +LP+ VF
Sbjct: 607 SARAPAPKASSNEELAKNCVASATRYFLATELDAAAEKKPGMEVEINYRSWNDLPSTVFA 666
Query: 449 GG 450
GG
Sbjct: 667 GG 668
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/439 (35%), Positives = 218/439 (49%), Gaps = 74/439 (16%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGE-------------------------LHQMLTEM 94
VH PGADIDT+ V P +R+ DFFG L + +
Sbjct: 40 VHEPGADIDTIAVAPSFCSRD-DFFGSNYVPPGDAMDEGDDEDGEQARDPDSLAERIRRQ 98
Query: 95 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 154
P VT PV +A VP++ F + G++IDLL+ARLS IP + DI D +L D T +S
Sbjct: 99 PHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKS 158
Query: 155 LNGCRVTDQILRLV----PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
LNG RVT+ I LV + Q F T +R +R WAK RG+YSN G+ GG+N + VA +
Sbjct: 159 LNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALV 218
Query: 211 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
QLYPNA P+ + +FF V+ WRWPNPV+L + LGLQVW+ + + + P+I
Sbjct: 219 LQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ-AANMRQVAPMI 277
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TPAYP MNS+ +VS TL+I+ +EF RGH I + + YK+Y
Sbjct: 278 TPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKL---------------------YKDY 316
Query: 331 L--------RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---- 378
R+ I+ D + W G+VESRLR+L + + + + P F
Sbjct: 317 QRGRDRPGGRLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCC 376
Query: 379 SDKSKPLY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ-AVSMYTLRKPGM 430
+DK+ L +YF+G + + GEQ DI + F++ + + PGM
Sbjct: 377 ADKTALLTHAQRANSITYFIGFRVDK--LRMRGEQLDIERQLSNFRKFELGRFHPLVPGM 434
Query: 431 QISVAHVTRRNLPNFVFPG 449
I + LP F G
Sbjct: 435 DILPKSFGVKELPTICFDG 453
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 160/259 (61%), Gaps = 37/259 (14%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + DL+ TRKL + LR ++E + E R VLG+L+
Sbjct: 20 GITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRRILVLGKLNTLVKFWIREVS 79
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF ++ L E
Sbjct: 80 EAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERT-DFFSSFYEKLKE 138
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D + +R
Sbjct: 139 QEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIR 198
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 199 SLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 258
Query: 214 YPNAVPSMLVSRFFRVYTQ 232
YPNAV + LV +FF V+++
Sbjct: 259 YPNAVAATLVHKFFLVFSK 277
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 212/385 (55%), Gaps = 23/385 (5%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+G +DID LC+GP A+ EDFF L ML EV+ELH V DA VP+++FKF G+
Sbjct: 62 VYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGIL 121
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+DL YA+L + IP ++D+ L++ DE + +SL+G R IL+LVP ++ F++ LR
Sbjct: 122 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLR 181
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++ FF + W+WP PV
Sbjct: 182 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPV 241
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+L S G P LMPI P + ++ ST ++ EF GH
Sbjct: 242 VLLEDTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGH 290
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ + K + W LFE + + Y + +I +SA N +DL +W GWV+SR R L +
Sbjct: 291 NLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLI 348
Query: 360 KIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
KIE Y + C P+P ++ + +K ++ GLQ + + V + E I +F +
Sbjct: 349 KIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDIESVKI-----DFLK 399
Query: 419 AVSMYTLRKPGMQISVAHVTRRNLP 443
V+ + R +I + V LP
Sbjct: 400 NVNSGSFRGTVGRIQLTLVKASQLP 424
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 211/385 (54%), Gaps = 23/385 (5%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+G +DID LC+GP A+ EDFF L ML EV+ELH V DA VP+++FKF G+
Sbjct: 86 VYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGIL 145
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+DL YA+L + IP ++D+ L++ DE + + L+G R IL+LVP ++ F++ LR
Sbjct: 146 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLR 205
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++ FF + W+WP PV
Sbjct: 206 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPV 265
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+L S G P LMPI P + ++ ST ++ EF GH
Sbjct: 266 VLLEDTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGH 314
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ + K + W LFE + + Y + +I +SA N +DL +W GWV+SR R L +
Sbjct: 315 NLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLI 372
Query: 360 KIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
KIE Y + C P+P ++ + +K ++ GLQ + + V + E I +F +
Sbjct: 373 KIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDIESVKI-----DFLK 423
Query: 419 AVSMYTLRKPGMQISVAHVTRRNLP 443
V+ + R +I + V LP
Sbjct: 424 NVNSGSFRGTVGRIQLTLVKASQLP 448
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 216/407 (53%), Gaps = 59/407 (14%)
Query: 14 PISLAGPT----DDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV--------- 60
PI++ P + D R+ L ++L + + EE +RE+V+ +L ++
Sbjct: 75 PIAVRVPPAFLFEADFRRSHSLVQFLENEGAVPTVEEDKTREQVIRKLKEIVMDWAKVVA 134
Query: 61 ------------------------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
HGP +DID LCVGP AT + FF L Q+L E
Sbjct: 135 YEQRVPPRRVTATVLTYGSYTLGAHGPESDIDALCVGPCIATLQHHFFVALRQILERRLE 194
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
V+ + V +A VP+M+F FSG+S+DL YA+L + E ++ S L+ D ++ RSL+
Sbjct: 195 VSGMQTVENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWRSLS 254
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
G RV +QI++LVP + F+ LR ++ WA+RRG++ ++ GF GI+ A+L A ICQ YPN
Sbjct: 255 GVRVNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQRYPN 314
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP- 275
A + L + FF ++ W W PV L P + + MPI+ P P
Sbjct: 315 ATANGLFTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSDGYYMPIVMPCTPP 363
Query: 276 --CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 333
CM+ N++ T + + +E RG+ + + + ++ D +W LF PF + Y+ +LRI
Sbjct: 364 ELCMS---NMTKCTFKKIREELMRGYALTKDLWRH--DFEWTWLFAPFPYATRYQQFLRI 418
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
+ + +++LR+W GWV+SR RQL LK+ER N L+C P+ + D
Sbjct: 419 ALCSPTSEELRDWTGWVKSRFRQLILKLER---NGLECDPYSSEEVD 462
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 226/420 (53%), Gaps = 40/420 (9%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
+H P +DID +C P H + DFF +LT M +VTEL VP+A VP++ + +
Sbjct: 338 LHDPDSDIDVVCAVPYHVS-HRDFFCGFSAVLTRMTQVTELVTVPNASVPLISLSYQSIK 396
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+DLL+A+L L I DLDI D IL +V+SLN RV+ IL LVP Q FR R
Sbjct: 397 LDLLFAQLPLLSIGADLDIHSDHILAGVSAASVKSLNAPRVSSMILSLVPNRQVFRRVSR 456
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
+R WA+RRG+YS+ G+L GINWALL A +CQL+P S + FF V ++W+WP P+
Sbjct: 457 AIRAWARRRGIYSSKLGYLSGINWALLTAFVCQLFPGRTVSYVFVHFFYVLSEWQWPKPI 516
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+L + LGL+ W + +D+ H+MPIITPAYP MNSS V+ STL ++ +E R
Sbjct: 517 MLNIPYDAKLGLECWSFQL--RDRTHVMPIITPAYPQMNSSAQVTASTLSVIKEELWRAR 574
Query: 300 EICE---------------------AMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDIS 336
++ E A+EK + D + WD L++P +FF Y Y+ + I
Sbjct: 575 DLLEREILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSSFFVRYDWYVGLTIQ 634
Query: 337 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRK 396
+++ +L W+ +V SRL +L +K+ + + H +P +K+ S F+GL+R+
Sbjct: 635 IDSS-ELGRWETFVCSRLHKL-VKMLQDLPMIDLVHGYPQFLVNKAGS---SLFLGLKRR 689
Query: 397 QG------VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 450
V F I +++ Q+ R MQ + + +LP+FVF G
Sbjct: 690 SEDDEEFLSSVNRTISFFIATDLQQNAQSSESPAKR---MQTTAVLLNWDDLPDFVFENG 746
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 189/317 (59%), Gaps = 16/317 (5%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
+GP +DID +CVGP A+ + FF L QML E PEV++LH + A VP+M+FKF+GVS+
Sbjct: 142 YGPESDIDAVCVGPCVASLQHHFFVVLRQMLEERPEVSDLHSIESARVPLMRFKFNGVSV 201
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
D Y +L + E + +L+ D + R L+G RV QI++LVP ++ F+ LRC
Sbjct: 202 DFPYVQLPVINAAEAIRAFDPRLLEKVDGASWRCLSGVRVNRQIMQLVPNMKRFQVLLRC 261
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WA++RG+Y ++ G+ GI+ A+L A +C+ +PNA + L S FF +++ W WP PV
Sbjct: 262 LKLWARKRGIYCHLVGYFAGIHLAVLGAYVCRRHPNASVNTLFSMFFDIFSHWPWPLPV- 320
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
A+ + + +W P D LMPI+ P +P + +++ ST + +E +RG
Sbjct: 321 --ALHDQA---PLWGP-----DGCSLMPIVMPCFPPEFCASSITKSTFNKIKEELRRGFA 370
Query: 301 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 360
+ + + D+DW +F P+ + Y+++L + +SA ++LR+W GWV+SR R L LK
Sbjct: 371 LTK--DIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTTEELRDWVGWVKSRFRNLILK 428
Query: 361 IERHTYNMLQCHPHPGD 377
+E + C P P +
Sbjct: 429 LESLD---VDCDPDPSE 442
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 214/398 (53%), Gaps = 49/398 (12%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------------- 60
A D R++ L ++ + S EE + R+ V+ LD++
Sbjct: 72 AAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQREQYW 131
Query: 61 ----------------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP 104
+GP +DID +CVGP A+ + FF L QML E PEV++LH +
Sbjct: 132 NTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIE 191
Query: 105 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 164
+A VP+M+FKF+G+ +D Y +L + E + +L +E + R L+G RV QI
Sbjct: 192 NAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVRVNRQI 251
Query: 165 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 224
++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L +
Sbjct: 252 MQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFN 311
Query: 225 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 284
FF +++ W WP PV L +++ + W P MPI+ P P + +++
Sbjct: 312 SFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSIT 360
Query: 285 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 344
ST + +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR
Sbjct: 361 RSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELR 418
Query: 345 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 419 DWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 453
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 238/509 (46%), Gaps = 76/509 (14%)
Query: 13 EPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------- 59
EP+S P+ + LM TRKLE L+ + ES E R VL L+
Sbjct: 4 EPLSTEHPSLEQLMSTRKLETCLKKEGIMESTEGYEQRNRVLANLNAFVKDWLYKYSLEH 63
Query: 60 -----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
VH DID L P+ TR FF + L + +
Sbjct: 64 GKSPEAAQLIRAKIFTFGSFRLGVHSKNGDIDALICFPQSVTRAA-FFSSFYDALAQRDD 122
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
V +LH A VP +K F GV +DLL A+L I LD+S D IL+N E VRS+N
Sbjct: 123 VEDLHSAESAAVPAIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPETCVRSIN 182
Query: 157 GCRVTDQILRLVPKI-QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 215
G RVTD+IL L P ++F LR ++ WAKRRG+Y N ++GG++ A+LVA+ICQL+P
Sbjct: 183 GRRVTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAKICQLFP 242
Query: 216 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMPIITPAY 274
A S LV +FF Y +W W PV L +E+ G + W P N D +M I+TP Y
Sbjct: 243 YATASTLVEKFFWHYKRWDWAIPVELQHVEDLGITHIPHWSPINNYHD-MSVMKILTPVY 301
Query: 275 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 334
P N+SY V+ STL + E R + + + +A W L++ FF Y +Y+ +
Sbjct: 302 PSQNASYTVTRSTLYRIKRELDRAESVVQKIADGKA--TWPRLWKQIPFFGVYSHYICVQ 359
Query: 335 ISAENADDLRNWKGWVESRLRQLTLKIERH---TYNMLQCHPHPGDF------------- 378
+ D ++G VES +R L +E H TY + P P F
Sbjct: 360 ALTNSEQDRTLYEGLVESTVRNLVTSLEFHPAVTYAI----PIPKAFRRSPEKDPSTLED 415
Query: 379 --SDKSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPG 429
+ + P YC +F+GL EQ DI + +F++ V S T P
Sbjct: 416 EDTHERPPEYCWRTLWFIGLVFDPKA----TEQLDILTVMSDFERRVRFKESRMTRYDPS 471
Query: 430 MQISVAHVTRRNLPNFVFPGGVRPSRPSK 458
M+ +V + R +P ++ + ++P+K
Sbjct: 472 MRYTVDPMARDEIPTWLH-AEAKVAKPAK 499
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 224/419 (53%), Gaps = 45/419 (10%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQM-LTEMPEVTELHPVPDAHVPVMKFKFSGVSID 121
P +DID + V TR D F EL + L+E+ +VT L+PVP A VPV+K KF GV +D
Sbjct: 99 PSSDIDCVVVAAHKVTR--DAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVD 156
Query: 122 LLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 181
+LY L+ + +D + D++L DE++ RS+NG RV+D I VP +F LR +
Sbjct: 157 VLYCGLAHPLSGPAIDPADDNLLCGMDEKSARSINGVRVSDAIKACVPHFAHFLGALRVI 216
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW---PNP 238
R WA+RRG+YSN G+LGG++WA+LVAR+CQL+PN PS LV RFFRVY++W W
Sbjct: 217 RAWARRRGIYSNALGYLGGVSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGA 276
Query: 239 VLLCAIE----EGSLGLQVW--DPRRNPKDK-----YHLMPIITPAYPCMNSSYNVSTST 287
V+L E EG +VW P+R D+ M +ITPAYP MNS++ V+ T
Sbjct: 277 VVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMT 336
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVD-WDTLFEPFTFFE----AYKNYLRIDISAENADD 342
+ + E +RG I + + + W+TL EP FF+ YK +L+I+I +
Sbjct: 337 MDTIKKELERGAGIISSKGVDLRSRECWETLLEPIHFFDYDQGGYKQFLQIEIGGASELS 396
Query: 343 LRNWKGWVESRLRQLTLK----IERHTYNMLQCHPHPGDFS----DKSKPLYCSYFMGLQ 394
++ +G V S+L+ L L+ + N G + K P + F+GL
Sbjct: 397 HKSAEGLVNSKLKPLLLRKMPEVAPEDTNKAPYRAWTGAVALEDPYKEYPYCSALFVGLS 456
Query: 395 RKQGVPVGEGEQFDIRLTVKEFKQ------AVSMYTLRKPGM-QISVAHVTRRNLPNFV 446
+P G D+R V+EF + A M + GM + V HV +LPN V
Sbjct: 457 ----IPPG----MDLRPAVREFMERLGIELATQMPEYKAGGMFDVRVRHVAGPSLPNTV 507
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 210/385 (54%), Gaps = 24/385 (6%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+G +DID LC+GP A+ DFF L ML EV+ELH V DA VP+++FKF G+
Sbjct: 62 VYGSESDIDALCIGPFFASIA-DFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGIL 120
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
+DL YA+L + IP ++D+ L++ DE + + L+G R IL+LVP ++ F++ LR
Sbjct: 121 VDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELFQSLLR 180
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
C++ WAKRRGVY N+ GFLGG++ A+L A +C PNA S L++ FF + W+WP PV
Sbjct: 181 CVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQWPTPV 240
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+L S G P LMPI P + ++ ST ++ EF GH
Sbjct: 241 VLLEDTYPSTG--------APPG---LMPIQLPCGSHQYCNSTITRSTFYKIVAEFLLGH 289
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
+ + K + W LFE + + Y + +I +SA N +DL +W GWV+SR R L +
Sbjct: 290 NLTKDYLK--LNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLI 347
Query: 360 KIERHTYNMLQCHPHPGDFSDK-SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418
KIE Y + C P+P ++ + +K ++ GLQ + + V + E I +F +
Sbjct: 348 KIE-EVYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRT-INVSDIESVKI-----DFLK 398
Query: 419 AVSMYTLRKPGMQISVAHVTRRNLP 443
V+ + R +I + V LP
Sbjct: 399 NVNSGSFRGTVGRIQLTLVKASQLP 423
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 190/370 (51%), Gaps = 30/370 (8%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDF 83
+ ++R + E + A + +V GR+ VHG G+DID + + P TRE F
Sbjct: 58 VRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSGSDIDIVLIAPNRITREH-F 116
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F L L+ +TELH + DA VP++ G+ IDL + + +PE + D +
Sbjct: 117 FNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDL 173
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
LQ D+Q+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI W
Sbjct: 174 LQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGW 233
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QV 253
A+LVA +CQ +PN + +V RFFR+Y W PNP + L L +
Sbjct: 234 AILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRG 293
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA-----MEKN 308
WDPR + D L P++TPA P N+ YNV+ + LR + DEF RGHEIC + +E+
Sbjct: 294 WDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEET 353
Query: 309 EADVD----WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ + W + EP FF YK YL + ++ +A+ + + VES++R L
Sbjct: 354 KMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAES 413
Query: 365 TYNMLQCHPH 374
L+ PH
Sbjct: 414 RAQSLESFPH 423
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 242/477 (50%), Gaps = 91/477 (19%)
Query: 37 DVNLYESQEEAVSREEVLGRLDQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE 96
+ NLY+ + + +S E+ + + +G H ++++ + +
Sbjct: 563 NTNLYDEKLKNISMEKDSNEISYPEVINTKKSDVKLGQEHTDKDKNLISGI--------K 614
Query: 97 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 156
+T LH + DA+VP++KF+ + +SIDLL+ R+ L +L++ D++L+N D++++ S+N
Sbjct: 615 ITNLHKIEDAYVPLIKFEINYISIDLLFTRVPL-PSLSNLNLLDDTLLKNMDDKSILSIN 673
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
G RVTD ++ LVP ++ F + LR +++WAKRRG+Y N G+ GG+ +A+LVARICQ YPN
Sbjct: 674 GSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAILVARICQYYPN 733
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 276
++ +FF +Y+ W+WPNPVLL + + L++WDP+ + D+ H MPIITPAYP
Sbjct: 734 KDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPIITPAYPS 793
Query: 277 MNSSYNVSTSTLRIMMDEFQR---------------------GHE--------------- 300
+ S++NV+ +TL ++ +E +R GHE
Sbjct: 794 ICSTHNVTNTTLGVINEELKRCLDIFKESKNIDSSFDETKIFGHESDINCASKQSIDPKS 853
Query: 301 ----ICEAMEKN-EADVDWD---------------------TLFEPFTFFEAYKNYLRID 334
I E E N V WD LF+ FF+ YK YL I
Sbjct: 854 KKLKIGEDHENNINTKVKWDLNNLSFDNLKVFYEKFYGLLKKLFQQSDFFKKYKFYLNIK 913
Query: 335 ISAENADDLRNWKGWVESRLRQLTLKIERHT-----YNMLQCHPHPGDFSDKSKPLYCSY 389
++ ++ WKG++ES++R L K+E Y M++ P P F + +
Sbjct: 914 LTNDDK-----WKGFIESKIRLLCAKLENSEGFSIGY-MIKAVPFPQSFVYND---FVHF 964
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
F+GL K + + +I V +F + ++ + + G +IS+ ++ + F+
Sbjct: 965 FVGLDYKDRIKI------NIDKPVNDFLRILNDWDKKDEGSEISIKINKKKEIGEFL 1015
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----------- 58
GIT P+S++G D+ +++ + +L N +E+ +++VSRE VLG L
Sbjct: 8 GITGPLSMSGSKLIDMYKSQIINDFLVKSNFFEAHQDSVSRERVLGYLSFLADKFCKGKI 67
Query: 59 --------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADIDTL V T DFF +ML E
Sbjct: 68 FTFGSYRLGVHQKGADIDTLLVSASDVTL-IDFFNGFFEMLKE 109
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 193/322 (59%), Gaps = 16/322 (4%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
+GP +DID +CVGP A+ + FF L QML E PEV++LH + +A VP+M+FKF+G+ +
Sbjct: 33 YGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLV 92
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
D Y +L + E + +L +E + R L+G RV QI++L+P I+ F+ LRC
Sbjct: 93 DFPYVQLPVINAAEAIHAFDPRLLAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRC 152
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +++ W WP PV
Sbjct: 153 LKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVS 212
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
L +++ + W P MPI+ P P + +++ ST + +E QRG
Sbjct: 213 L--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFA 261
Query: 301 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 360
+ + ++N D++W LF PF + YK++LRI +SA A++LR+W GWV+SR R L LK
Sbjct: 262 LTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLK 319
Query: 361 IERHTYNMLQCHPHPGDFSDKS 382
+E + C P P + +D S
Sbjct: 320 LESIG---VDCDPDPSEQADHS 338
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 183/325 (56%), Gaps = 16/325 (4%)
Query: 68 DTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL 127
D + + R+ R D F +L+ + ++ +L V +A PV+KF+ L ARL
Sbjct: 1 DAVMIVTRYIDRS-DMFDDLYVAMQAREDIKDLIKVQEARAPVIKFRMDDFEFKLSMARL 59
Query: 128 SLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKR 187
+ +PED D++ D L+N D ++V SLN RVTD I LVP + +F+ ++ ++FWAK+
Sbjct: 60 NYATLPEDFDVTDDKHLKNVDPESVASLNSVRVTDTIRSLVPNLISFKYCIQALKFWAKK 119
Query: 188 RGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG 247
RGVY+N GFLG I+ ++ ARICQLYP A+PS L+ FF Y QW+WP PV L I
Sbjct: 120 RGVYNNGLGFLGSISLEIMAARICQLYPKALPSRLLYFFFFTYCQWKWPQPVELAEIVAN 179
Query: 248 S--LGLQVWDP-RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 304
S L L VW D+ HLMPII+P YP N++ VS STL+IM + F R +C+
Sbjct: 180 SHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQ 239
Query: 305 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ + +A W LFEP F Y N+L+I SA + D WKG+ + + + +ER
Sbjct: 240 IHEGKA--GWCDLFEPVDLFSTYANFLQIQASARSKADHNMWKGFCAANIHNMISYLER- 296
Query: 365 TYNMLQCHPHPGDFSDKSKPLYCSY 389
C P + D++ P+ SY
Sbjct: 297 ------C---PDAYLDRAHPIQRSY 312
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 240/492 (48%), Gaps = 64/492 (13%)
Query: 12 TEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------ 59
+P+S GP+ D+ KL + L+ + YE +E RE+ L +++
Sbjct: 30 AQPLSFDGPSVADMQLNDKLMETLKQLGAYEDKECNKRREQALENIEKIMKTWTCEICKT 89
Query: 60 ----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 97
VH +DID LC+ P R E FF + L E+ +
Sbjct: 90 KNISLDFDCSCRVAPFGSYCLGVHSHDSDIDLLCIIPEVVNRSE-FFSRVPAKLAEVEGI 148
Query: 98 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD-SILQNADEQTVRSLN 156
T + + DA PV+KF++ G IDL R+ IP DL+I+ D +L+ D + + LN
Sbjct: 149 TCIKSLADAFAPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLN 208
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
G RVT ++L+ VP I+NF+ LR ++ WA+RR +YS + GF GG+ W ++ A++ QLYP
Sbjct: 209 GPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMAAQVAQLYPK 268
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-------LGLQVWDPRRNPKDKYHLMPI 269
PS+L+ +FF +Y W++ + +++ EE L WDP R + L +
Sbjct: 269 MCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFSRRPLT-V 327
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITP YP NS++NV+ S L ++ +E R + + + + + E+ ++ LFEP FF+ Y
Sbjct: 328 ITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGES--SYNDLFEPAMFFKQYGT 385
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP-----------HPGDF 378
+++I++ + + + G+VES++R+L K+ + HP H G
Sbjct: 386 FVQIEVLG-SEKHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGG 444
Query: 379 SDKSKPLYCSYF-MGLQRKQGVP---VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 434
+ P +F +GL+ + G+ D VKEF + ++ IS+
Sbjct: 445 DPEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEF--LLGIHITDPTQTSISI 502
Query: 435 AHVTRRNLPNFV 446
V RR LP +V
Sbjct: 503 KVVKRRALPEWV 514
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 193/322 (59%), Gaps = 16/322 (4%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
+GP +DID +CVGP A+ + FF L QML E PEV++LH + +A VP+M+FKF+G+ +
Sbjct: 33 YGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAKVPLMRFKFNGMLV 92
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
D Y +L + E + +L +E + R L+G RV QI++L+P I+ F+ LRC
Sbjct: 93 DFPYVQLPVINAAEAIHAFDPRLLAVVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRC 152
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +++ W WP PV
Sbjct: 153 LKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVS 212
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
L +++ + W P MPI+ P P + +++ ST + +E QRG
Sbjct: 213 L--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFA 261
Query: 301 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 360
+ + ++N D++W LF PF + YK++LRI +SA A++LR+W GWV+SR R L LK
Sbjct: 262 LTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLK 319
Query: 361 IERHTYNMLQCHPHPGDFSDKS 382
+E + C P P + +D S
Sbjct: 320 LESIG---VDCDPDPSEQADHS 338
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 173/294 (58%), Gaps = 30/294 (10%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFG-----------------ELHQMLTEMPEVTELHP 102
VH PGADIDT+ V P +A + DFFG L + + P+VT P
Sbjct: 47 VHEPGADIDTILVSP-NACQRMDFFGTTILSTVEGEEGTRDPTSLAERIRTHPDVTNFVP 105
Query: 103 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 162
V A VP++ F + G++IDLL+ARL+ +P D DI D++L AD T +SLNG RVT+
Sbjct: 106 VESAAVPILTFDWEGINIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLNGPRVTN 165
Query: 163 QILRLVP----KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 218
I LV + Q F T +RC+R WAK RG+YSN G+ GG+N + VA + QLYPNA
Sbjct: 166 LIAALVSGTPQRYQVFLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQLYPNAC 225
Query: 219 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 278
+ L+ +FF V+ WRWP P+LL + GL VW + + P+ITPAYP MN
Sbjct: 226 GASLLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVATAVR---QVAPMITPAYPAMN 282
Query: 279 SSYNVSTSTLRIMMDEFQRGHEICEAM----EKNEA-DVDWDTLFEPFTFFEAY 327
S+ VS TL+I+ +EF RGH + + + +KN A +++W+TLFEP FF Y
Sbjct: 283 STLAVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 189/370 (51%), Gaps = 30/370 (8%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDF 83
+ ++R + E + A + +V GR+ VHG G+DID + + P TRE F
Sbjct: 58 VRAWIRSTMIAEFRMPAEAAAQVEGRIFATGSYRYNVHGSGSDIDIVLIAPNRITREH-F 116
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F L L+ +TELH + DA VP++ G+ IDL + + +PE + D +
Sbjct: 117 FNTLAPRLSHESRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDL 173
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
LQ D+Q+V S N RV I+ L P +FR LR ++ W K RG+YSN GF GI W
Sbjct: 174 LQGLDDQSVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGW 233
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QV 253
A+LVA +CQ +PN + +V RFFR+Y W PNP + L L +
Sbjct: 234 AILVAFVCQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRG 293
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA-----MEKN 308
WDPR + D L P++TPA P N+ YNV+ + LR + DEF RGHEIC + +E+
Sbjct: 294 WDPRESKSDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEET 353
Query: 309 EADVD----WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+ + W + EP FF YK YL + ++ +A+ + + VES++R L
Sbjct: 354 KMKLGPHGIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAES 413
Query: 365 TYNMLQCHPH 374
L+ PH
Sbjct: 414 RAQSLESFPH 423
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 159/260 (61%), Gaps = 37/260 (14%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQW 233
YPNA+ S LV +FF V+++W
Sbjct: 260 YPNAIASTLVHKFFLVFSKW 279
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 212/404 (52%), Gaps = 47/404 (11%)
Query: 12 TEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------------ 59
+P+S GP+ D+ KL + L+ + YE +E RE+ L +++
Sbjct: 30 AQPLSFDGPSVADMKLNDKLMETLKQLGAYEDKECNQRREQALENIEKIMKTWTCEICKT 89
Query: 60 ----------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEV 97
VH +DID LC+ P R E FF + L E+ +
Sbjct: 90 KNISLDFDCSCRVVPFGSYCLGVHSHDSDIDLLCIIPEVVNRSE-FFSRVPAKLAEVEGI 148
Query: 98 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD-SILQNADEQTVRSLN 156
T + + DA VPV+KF++ G IDL R+ IP DL+I+ D +L+ D + + LN
Sbjct: 149 TCIKSLADAFVPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDTKDITCLN 208
Query: 157 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 216
G RVT ++L+ VP I+NF+ LR ++ WA+RR +YSN+ GF GG+ W ++ A++ QLYP
Sbjct: 209 GPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMAAQVAQLYPK 268
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-------LGLQVWDPRRNPKDKYHLMPI 269
PS+L+ +FF +Y W++ + +++ EE L WDP R+ + L +
Sbjct: 269 MCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFSRRPLT-V 327
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 329
ITP YP NS++N++ S L ++ +E R + + + + + E+ ++ LFEP FF+ Y
Sbjct: 328 ITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGES--SYNDLFEPAMFFKQYGT 385
Query: 330 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 373
+++I++ + + + G+VES++R+L K+ + HP
Sbjct: 386 FVQIEVLG-SEKHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHP 428
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 159/260 (61%), Gaps = 37/260 (14%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQW 233
YPNA+ S LV +FF V+++W
Sbjct: 260 YPNAIASTLVHKFFLVFSKW 279
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 159/260 (61%), Gaps = 37/260 (14%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 200 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQL 259
Query: 214 YPNAVPSMLVSRFFRVYTQW 233
YPNA+ S LV +FF V+++W
Sbjct: 260 YPNAIASTLVHKFFLVFSKW 279
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 129/167 (77%)
Query: 106 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 165
A VPV+K F + ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL
Sbjct: 1 AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60
Query: 166 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 225
LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +
Sbjct: 61 HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120
Query: 226 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
FF V+++W WPNPVLL E+ +L L VW PR P D+YHLMPIITP
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 186/370 (50%), Gaps = 30/370 (8%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDF 83
+ ++R + E + A + +V GR+ VHG G+DID + + P TRE F
Sbjct: 58 VRAWIRSTMITEFRMPAEAAAQVEGRIFATGSYRYNVHGSGSDIDIVLIAPNRITREH-F 116
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F L L+ P +T+LH + DA VP++ G+ IDL + + +PE + D +
Sbjct: 117 FNTLAPRLSHEPRITKLHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDL 173
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
LQ D+Q+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI W
Sbjct: 174 LQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGW 233
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QV 253
A+LVA +CQ +PN + +V RFFR+Y W PNP + L L +
Sbjct: 234 AILVAFVCQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGRC 293
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EA 304
WDPR + D L P++TPA P N+ +NV+ + LR + EF RGH IC E
Sbjct: 294 WDPRESKSDALALFPVLTPAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNET 353
Query: 305 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
EK W + EP FF YK Y+ + ++ +A+ + + VES++R L
Sbjct: 354 KEKFGPHGLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAES 413
Query: 365 TYNMLQCHPH 374
++ PH
Sbjct: 414 RAQSIESFPH 423
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 176/302 (58%), Gaps = 20/302 (6%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A VP+M+F+FSG+S+
Sbjct: 84 HGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESAKVPLMRFRFSGISV 143
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
D YA+L + S +LQ D + RSL+G RV +QI++LVP Q F+ LRC
Sbjct: 144 DFTYAQLP------AIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRC 197
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF ++ W W PV
Sbjct: 198 IKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPV- 256
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
SL Q + RR P + MPI+ P P + N++ T + + +E RG+
Sbjct: 257 -------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYA 306
Query: 301 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 360
+ + E D +W LF PF + Y+ +LRI + A +++LR+W GWV+SR L LK
Sbjct: 307 LTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRF-NLILK 363
Query: 361 IE 362
+E
Sbjct: 364 LE 365
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 220/492 (44%), Gaps = 85/492 (17%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDF 83
+ ++R + E + A + +V GR+ VH G+DID + + P TRE F
Sbjct: 58 VRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-F 116
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F L L P +TELH + DA VP++ G+ IDL + + +PE + D +
Sbjct: 117 FNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDL 173
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
LQ D+Q+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI W
Sbjct: 174 LQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGW 233
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QV 253
A+LVA +CQ +PN + +V RFFR+Y W PNP + L L +
Sbjct: 234 AILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRG 293
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EA 304
WDPR + D L P++TPA P N+ +NV+ + LR + EF RGHEIC EA
Sbjct: 294 WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEEA 353
Query: 305 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL------- 357
+ W L EP FF YK YL + +S +A+ + + VES++R L
Sbjct: 354 KSRFGPHGIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAES 413
Query: 358 ---TLKIERHTYNMLQ----------------------------------CHPHPGDFSD 380
L+ RH L H G D
Sbjct: 414 RGYALENVRHVRIQLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAMDD 473
Query: 381 KSKP--LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISV 434
S P C YF+G+ P G + D+ +++ F V K G+ I+V
Sbjct: 474 SSAPKIFSCHYFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITV 530
Query: 435 AHVTRRNLPNFV 446
+++ +P FV
Sbjct: 531 EDISK--IPAFV 540
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 190/379 (50%), Gaps = 36/379 (9%)
Query: 34 YLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDFFGE 86
++R + E + + +V GR+ VH G+DID + + P TRE FF
Sbjct: 64 WIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNT 122
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
L L P VTELH + ++ VP++ G+ IDL + + +PE + D +LQ
Sbjct: 123 LAPRLKGEPWVTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQG 179
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DEQ+V S N RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L
Sbjct: 180 LDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAIL 239
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDP 256
A +CQ YPN + +++RFFR Y W PNP + L L + WDP
Sbjct: 240 TAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDP 299
Query: 257 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD 313
R + D L P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA
Sbjct: 300 RESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAK 359
Query: 314 ------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERH 364
W + EP FF +++YL+I +S +A+ + + VESR+R L H
Sbjct: 360 FGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGH 419
Query: 365 T---YNMLQCHPHPGDFSD 380
T Y L+ H +P F D
Sbjct: 420 TLEDYRQLRLHLNPHRFED 438
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 187/337 (55%), Gaps = 37/337 (10%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+M+F+F+G+++
Sbjct: 148 HGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAV 207
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK---------I 171
DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP +
Sbjct: 208 DLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTM 267
Query: 172 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 231
Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S L + FF+ +
Sbjct: 268 QKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFA 327
Query: 232 QWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 285
W W PV L C EG LMPI+ P P + V+
Sbjct: 328 HWPWQVPVSLHDELTTCLHSEG-----------------RLMPIVMPCTPPEFCASTVTK 370
Query: 286 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 345
+L+ + +E RG+ + + D W LFEPF + + Y+ +LRI + A +L +
Sbjct: 371 GSLKKIREELTRGYVLTR--DPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGD 428
Query: 346 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 429 WAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 462
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 187/337 (55%), Gaps = 37/337 (10%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+M+F+F+G+++
Sbjct: 33 HGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAV 92
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK---------I 171
DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP +
Sbjct: 93 DLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTM 152
Query: 172 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 231
Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S L + FF+ +
Sbjct: 153 QKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFA 212
Query: 232 QWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 285
W W PV L C EG LMPI+ P P + V+
Sbjct: 213 HWPWQVPVSLHDELTTCLHSEG-----------------RLMPIVMPCTPLEFCASTVTK 255
Query: 286 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 345
+L+ + +E RG+ + + D W LFEPF + + Y+ +LRI + A +L +
Sbjct: 256 GSLKKIREELTRGYVLTR--DPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGD 313
Query: 346 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 314 WAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 347
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 184/322 (57%), Gaps = 15/322 (4%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
+GP +DID LC+GP A+ + FF L QML PEV+ELH + A VP+M+FKF+G+ +
Sbjct: 139 YGPESDIDVLCIGPCIASLQHHFFVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILV 198
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
D Y +L + E + +L+N D + R L+G R QI++LVP ++ F+ LRC
Sbjct: 199 DFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRC 258
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WA++RG++ ++ GF GI+ A+L A +C+ +PNA + L+S FF ++ W WP PV
Sbjct: 259 LKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPVS 318
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
L L P R P D LMPI+ P P S + + ST + +E RG+
Sbjct: 319 L---------LDPPVPCRGP-DGCSLMPIMLPCIPPEFCSSSTTESTFSKIKEELWRGYA 368
Query: 301 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 360
+ + + D +W LF PF + YK +LRI +SA ++LR+W GWV+SR R L LK
Sbjct: 369 LSK--DTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRDWVGWVKSRFRNLLLK 426
Query: 361 IERHTYNMLQCHPHPGDFSDKS 382
+E + C P P + D +
Sbjct: 427 LESLG---VYCDPDPSEQVDHT 445
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 178/346 (51%), Gaps = 29/346 (8%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH G+DID + + P TRE FF L L P VT+LH + ++ VP++ G+
Sbjct: 97 VHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKSEPWVTDLHCIRESRVPIIAMVCDGID 155
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDL + + +PE + D +LQ DEQ+V S N RV I+ LVP FR TLR
Sbjct: 156 IDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLR 212
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP- 238
++ W K R +YSN GF GI WA+L A +CQ YPN + +V+RFFR Y W PNP
Sbjct: 213 FVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPH 272
Query: 239 --------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 289
+ L L + WDPR + D L P++TPA P N+ YNV+ + LR
Sbjct: 273 ETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLR 332
Query: 290 IMMDEFQRGHEICE---AMEKNEADVD------WDTLFEPFTFFEAYKNYLRIDISAENA 340
+ DEFQRGH++ M EA W + EP FF +++YL+I +S +A
Sbjct: 333 QLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDA 392
Query: 341 DDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCHPHPGDFSD 380
+ + + VESR+R L HT Y L+ H +P F D
Sbjct: 393 EHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLHLNPRRFED 438
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 181/353 (51%), Gaps = 30/353 (8%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDF 83
+ ++R + E + A + +V GR+ VH G+DID + + P TRE F
Sbjct: 58 VRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-F 116
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F L L P +TELH + DA VP++ G+ IDL + + +PE + D +
Sbjct: 117 FNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDL 173
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
LQ D+Q+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI W
Sbjct: 174 LQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGW 233
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QV 253
A+LVA +CQ +PN + +V RFFR+Y W PNP + L L +
Sbjct: 234 AILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRG 293
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EA 304
WDPR + D L P++TPA P N+ +NV+ + LR + EF RGHEIC EA
Sbjct: 294 WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEA 353
Query: 305 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 357
+ W L EP FF +K YL + +S +A+ + + VESR+R L
Sbjct: 354 KSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 220/492 (44%), Gaps = 85/492 (17%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDF 83
+ ++R + E + A + +V GR+ VH G+DID + + P TRE F
Sbjct: 58 VRAWIRSTMITEFRMPAEAATQVEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-F 116
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F L L P +TELH + DA VP++ G+ IDL + + +PE + D +
Sbjct: 117 FNTLAPRLQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDL 173
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
LQ D+Q+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI W
Sbjct: 174 LQGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGW 233
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QV 253
A+LVA +CQ +PN + +V RFFR+Y W PNP + L L +
Sbjct: 234 AILVAFVCQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRG 293
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EA 304
WDPR + D L P++TPA P N+ +NV+ + LR + EF RGHEIC EA
Sbjct: 294 WDPRESKSDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEA 353
Query: 305 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN------------WKGWVES 352
+ W L EP FF +K YL + +S +A+ + W G ES
Sbjct: 354 KSRFGPHGIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAES 413
Query: 353 R------LRQLTLKIERHTYNM--------------------------LQCHPHPGDFSD 380
R +R + +++ Y + H G D
Sbjct: 414 RGYALENIRHVRIRLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAVDD 473
Query: 381 KSKP--LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISV 434
S P C YF+G+ P G + D+ +++ F V K G+ I+V
Sbjct: 474 SSAPKIFSCHYFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITV 530
Query: 435 AHVTRRNLPNFV 446
+++ +P FV
Sbjct: 531 EDISK--IPVFV 540
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 190/379 (50%), Gaps = 36/379 (9%)
Query: 34 YLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDFFGE 86
++R + E + + +V GR+ VH G+DID + + P TRE FF
Sbjct: 64 WIRHTMITEFRMPEAAAAQVEGRIFATGSYRYNVHTSGSDIDMVLIAPSRITREH-FFNT 122
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN 146
L L P VT+LH + ++ VP++ G+ IDL + + +PE + D +LQ
Sbjct: 123 LAPRLKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQG 179
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
DEQ+V S N RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L
Sbjct: 180 LDEQSVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAIL 239
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDP 256
A +CQ YPN + +V+RFFR Y W PNP + L L + WDP
Sbjct: 240 TAFVCQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDP 299
Query: 257 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD 313
R + D L P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA
Sbjct: 300 RESKSDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAK 359
Query: 314 ------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERH 364
W + EP FF +++YL+I +S +A+ + + VESR+R L H
Sbjct: 360 FGPFGVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGH 419
Query: 365 T---YNMLQCHPHPGDFSD 380
T Y L+ H +P F D
Sbjct: 420 TLEDYRQLRLHLNPRRFED 438
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 187/337 (55%), Gaps = 37/337 (10%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+M+F+F+G+++
Sbjct: 33 HGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAV 92
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK---------I 171
DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP +
Sbjct: 93 DLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPNAEFCFTGNTM 152
Query: 172 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 231
Q F+T LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A S L + FF+ +
Sbjct: 153 QKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFA 212
Query: 232 QWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 285
W W PV L C EG LMPI+ P P + V+
Sbjct: 213 HWPWQVPVSLHDELTTCLHSEG-----------------RLMPIVMPCTPPEFCASTVTK 255
Query: 286 STLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN 345
+L+ + +E RG+ + + D W LFEPF + + Y+ +LRI + A +L +
Sbjct: 256 GSLKKIREELTRGYVLTR--DPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGD 313
Query: 346 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
W GWV+SR R L LK+ER ++C P P + D +
Sbjct: 314 WAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHT 347
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 177/346 (51%), Gaps = 29/346 (8%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH G+DID + + P TRE FF L L P VTELH + ++ VP++ G+
Sbjct: 97 VHTSGSDIDMVLIAPSRITREH-FFNTLAPRLKGEPWVTELHCIRESRVPIIAMVCDGID 155
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
IDL + + +PE + D +LQ DEQ+V S N RV I+ LVP FR LR
Sbjct: 156 IDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLSCNAVRVAHNIMDLVPNKAVFRQALR 212
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP- 238
++ W K R +YSN GF GI WA+L A +CQ YPN + +++RFFR Y W PNP
Sbjct: 213 FVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCYPNQNAAGMITRFFRTYHTWFKPNPH 272
Query: 239 --------VLLCAIEEGSLGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 289
+ L L + WDPR + D L P++TPA P N+ YNV+ + LR
Sbjct: 273 ETGTENRAIYLTESMRARTHLGRGWDPRESKSDAMALFPVLTPAVPYGNTCYNVTLTNLR 332
Query: 290 IMMDEFQRGHEICE---AMEKNEADVD------WDTLFEPFTFFEAYKNYLRIDISAENA 340
+ DEFQRGH++ M EA+ W + EP FF +++YL I +S +A
Sbjct: 333 QLCDEFQRGHDLLSNDLGMSAVEAEAKFGPFGVWSRVLEPAPFFGKFRHYLHIKVSCSDA 392
Query: 341 DDLRNWKGWVESRLRQL---TLKIERHT---YNMLQCHPHPGDFSD 380
+ + + VESR+R L HT Y L+ H +P F D
Sbjct: 393 EHYQAYADGVESRIRILWAGNASSRGHTLEDYRQLRLHLNPRRFED 438
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 182/328 (55%), Gaps = 27/328 (8%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
+GP +DID LC+GP A+ + FF L QML PEV+ELH + A VP+M+FKF+G+ +
Sbjct: 139 YGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILV 198
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
D Y +L + E + +L+N D + R L+G R QI++LVP ++ F+ LRC
Sbjct: 199 DFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRC 258
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV- 239
++ WA++RG+ ++ GF GI+ A+L A +C+ +PNA + L+S FF ++ W WP PV
Sbjct: 259 LKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLPVS 318
Query: 240 -----LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
+LC +G LMPI+ P P S + + ST + +E
Sbjct: 319 LLDPPVLCGGPDGC----------------SLMPIMLPCIPPEFCSSSTTESTFSKIKEE 362
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
+RG+ + + + D DW LF PF + YK +LRI +SA D+LR+W GWV+SR
Sbjct: 363 LRRGYALSK--DTRSTDSDWSWLFAPFPYGARYKCFLRIVLSAPMEDELRDWVGWVKSRF 420
Query: 355 RQLTLKIERHTYNMLQCHPHPGDFSDKS 382
R L LK+E + C P P D +
Sbjct: 421 RNLLLKLESLG---VYCDPDPSKQVDHT 445
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 159/289 (55%), Gaps = 43/289 (14%)
Query: 11 ITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHG-------- 62
I PIS AGPT DL + + ++L S+E+ RE+ L L+ V G
Sbjct: 18 IWAPISEAGPTVADLKQNEGMLEFLTTAAPEASKEDREKREKALRVLEGVIGDWLTEVGV 77
Query: 63 ------------------------------PGADIDTLCVGPRHATREEDFFGELHQMLT 92
P +DID LCV PRH TRE FFG L L
Sbjct: 78 QQGMTAENARKQSNNGKLFTFGSHRLGLISPSSDIDCLCVAPRHVTREA-FFGSLVGKLQ 136
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+M EV + PVPDA+ P++K GV IDLL+ARL+L D+ D +L+N D+++V
Sbjct: 137 QMDEVETVTPVPDAYAPIIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDRSV 196
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
R +NG RV D IL+LVP FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+CQ
Sbjct: 197 RCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARVCQ 256
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPR 257
++PN LV RFF + ++W W NPV LC I E G + +VW+P+
Sbjct: 257 MFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 167 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 226
LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV S++V +F
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 227 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 286
F +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++S
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120
Query: 287 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRN 345
T ++++ E RG I + + + W LFE FF YK YL + + ++A++ +
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKK 178
Query: 346 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
W G++ES+LRQL LK+E + HP+ DFS
Sbjct: 179 WSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 211
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 189/348 (54%), Gaps = 28/348 (8%)
Query: 26 MRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-------VHGPGADIDTLCVGPRHAT 78
+ R+L+K + D + EE V V + HGP +DID LCVGP A
Sbjct: 102 LVIRELKKIVTDWAKGVASEERVPPRRVTATVLTYGSYTLGAHGPESDIDALCVGPCIAN 161
Query: 79 REEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 138
FF L Q+L PEV+ L V +A VP+M+F+FSG+S+DL YA+L + + ++
Sbjct: 162 LPHHFFVVLRQILKCRPEVSGLQTVENAKVPLMRFRFSGISVDLTYAQLPVLDAVQAINT 221
Query: 139 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 198
S L+ D ++ +SL+G RV +QI++LVP + F+ LRC++ WA+RRG++ ++ G
Sbjct: 222 SSPQYLRRLDSRSWKSLSGVRVNEQIVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSF 281
Query: 199 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 258
GI+ A+L A +CQ +PNA + L + FF ++ W W PV D
Sbjct: 282 AGIHLAILAAYVCQRFPNATANGLFTMFFGIFAHWPWHIPV---------------DLHG 326
Query: 259 NPKDKYH----LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 314
P + H LMPI+ P P + N++ T R + +E RG+ + + + + D +W
Sbjct: 327 QPTNCRHSDGCLMPIVMPCTPPELCASNMTEGTFRKIREELMRGYVLTKDLGSH--DFEW 384
Query: 315 DTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
+FEPF + Y +LRI + A +++L +W GWV+SR L LK+E
Sbjct: 385 AWIFEPFPYSTTYGQFLRIALCAPTSEELHDWIGWVKSRFPYLILKLE 432
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/259 (45%), Positives = 156/259 (60%), Gaps = 37/259 (14%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 18 GITSPISLAAPKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 77
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 78 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 136
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 137 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 196
Query: 154 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
SLNGCRVTD+IL LVP I NFR TLR ++ WA +YSN+ GFLGG++WA+LVAR CQL
Sbjct: 197 SLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAMLVARTCQL 256
Query: 214 YPNAVPSMLVSRFFRVYTQ 232
YPNA+ S LV +FF V+++
Sbjct: 257 YPNAIASTLVHKFFLVFSK 275
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 187/354 (52%), Gaps = 62/354 (17%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD---------- 58
+G+T ISLA P +D +T +L+K N++E + + R E+L +L
Sbjct: 1 MGMTSAISLAEPKTEDHTKTVELQKAFEPYNVFEDEPKLNHRMEILSKLKTLVKQWVRNV 60
Query: 59 --------------------------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+ G +ID LC PR+ R+ D+FG ++L
Sbjct: 61 SISKNMPEVLAEKLGGKIYTFGSYRLSVNHKGTNIDALCEAPRNIERQ-DYFGSFFELLK 119
Query: 93 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 152
+ PEVT V +A VPV+ F G+ IDLL+ARL+L IP++ D+ +D +L+N D + V
Sbjct: 120 KQPEVTGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLV 179
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
VP R R G+YSN G+ GG++W +LVAR CQ
Sbjct: 180 ER-------------VP---------RHRRDPTAEHGIYSNSLGYFGGVSWGMLVARTCQ 217
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
L PN + + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLM IITP
Sbjct: 218 L-PNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITP 276
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
AYP NS+++VS+ST ++M++EF +I + + +A WD LFE ++ E+
Sbjct: 277 AYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKA--GWDKLFEAPSWSES 328
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 156/256 (60%), Gaps = 40/256 (15%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV--------- 60
GIT PISL GP DL + KLE+ +R ++ES+EE R E+L R++ +
Sbjct: 9 GITSPISLEGPKLVDLKLSEKLEEAMRPHGVFESEEEMSHRMEILNRINTLVRKWIKDVS 68
Query: 61 ------------------------------HGPGADIDTLCVGPRHATREEDFFGELHQM 90
H GADIDT+C+ P H R DFF ++
Sbjct: 69 RQKSEINYLEYKINAFGGKVCIFGSYRLGAHTKGADIDTVCIAPGHVDRS-DFFSSFVEV 127
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L PEV +L + +A+VP++K F G+ +D+++ARL+L IP+++D+ +S+L++ + +
Sbjct: 128 LKHTPEVKDLRAIEEAYVPLIKMTFDGIELDMVFARLTLPQIPDEIDLRDESLLRHLNTK 187
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
VRSLNGCRVTD+IL LVP NFR TL ++ WAK++G+YS V GFLGG++WA+LVAR+
Sbjct: 188 CVRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWAILVARV 247
Query: 211 CQLYPNAVPSMLVSRF 226
CQLYPNA P+ L+ +F
Sbjct: 248 CQLYPNAAPATLLHKF 263
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 187/371 (50%), Gaps = 32/371 (8%)
Query: 31 LEKYLRDVNLYESQEEAVSREEVLGRL-------DQVHGPGADIDTLCVGPRHATREEDF 83
+ ++R + E + A + +V GR+ VH G+DID + + P TRE F
Sbjct: 58 VRAWIRSTMITEFRMPAEAAAQVEGRIFATGSYRYNVHASGSDIDIVLIAPNRITREH-F 116
Query: 84 FGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSI 143
F L L+ VTELH + DA VP++ G+ IDL + + +PE + D +
Sbjct: 117 FDTLAPRLSHEARVTELHCIRDARVPLIAMVVDGIDIDLSFGSIRQDRVPE---VITDDL 173
Query: 144 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
L+ D+Q+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI W
Sbjct: 174 LRGLDDQSVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGW 233
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIE--EGSLGLQ 252
A+LVA + Q +PN + +V RFFR+Y W PNP + L + SLG +
Sbjct: 234 AILVAFVSQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLG-R 292
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA---MEKNE 309
WDPR + D L P++TPA P N+ YNV+ + LR + EF RGHEIC + M N+
Sbjct: 293 CWDPRESKSDALALFPVLTPAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVND 352
Query: 310 ADVD------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 363
W+ + EP F Y+ YL I I+ + + + + VES++R L
Sbjct: 353 TRTKFGKYGLWNKILEPVKVFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFLWAGTAE 412
Query: 364 HTYNMLQCHPH 374
L+ + H
Sbjct: 413 SRAQSLESYKH 423
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH GADID LCV PRH R DFF + L EV +L V +A VPV+K F G+
Sbjct: 36 VHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIE 94
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR
Sbjct: 95 IDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLR 154
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW-PNP 238
++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W+W P P
Sbjct: 155 AIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWQWHPTP 214
Query: 239 VLL 241
VLL
Sbjct: 215 VLL 217
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 161/241 (66%), Gaps = 1/241 (0%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
P +DID +CV P H T +DFFG Q+L + P V+ L PV A+VP++ F GV +DL
Sbjct: 495 PNSDIDAVCVAPWHVT-HDDFFGSFCQLLAQTPGVSHLAPVRSAYVPLISLSFLGVRMDL 553
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
L++RL + + + +I D +L E ++++LN RV+ +L LVP+ + +R LR +R
Sbjct: 554 LFSRLPMSSVESNQNIDSDHMLVGVHETSMKALNAPRVSSMLLCLVPRRREYRIVLRAVR 613
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC 242
WA+RRG+YS G+LGGI+WA+LVA +CQLYPNA P+ + RFF+V ++W+WP PV+L
Sbjct: 614 AWARRRGIYSAKLGYLGGISWAILVAFVCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLN 673
Query: 243 AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC 302
I + LG +WDPR++ D+ H+MPIITPAYP MNSS VS S+ ++ +E R +
Sbjct: 674 MIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVSQSSFSVIYEELWRARYLA 733
Query: 303 E 303
E
Sbjct: 734 E 734
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 13/260 (5%)
Query: 196 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD 255
GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWD
Sbjct: 3 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62
Query: 256 PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD 315
PR NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW
Sbjct: 63 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWS 120
Query: 316 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 375
L EP FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P
Sbjct: 121 KLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNP 179
Query: 376 GDFS-----DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLR 426
F K +F+G+ ++ V E D+ ++ F V + +
Sbjct: 180 QSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINML 238
Query: 427 KPGMQISVAHVTRRNLPNFV 446
K GM+I HV ++ L +++
Sbjct: 239 KEGMKIEATHVKKKQLHHYL 258
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 203/375 (54%), Gaps = 53/375 (14%)
Query: 109 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 168
P + K + IDL++ARL+L+ I L++ S+L+N DE++V SLNG RVTD+IL LV
Sbjct: 316 PGLNKKMVEIKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLV 375
Query: 169 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 228
P F LRC+++WAKRR + ++ G+ GG+ +A+ VARICQL+PN ++ ++F
Sbjct: 376 PNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFE 435
Query: 229 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 288
+Y +W+WP PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST+
Sbjct: 436 LYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIMNSTM 495
Query: 289 RIMMDEFQRGHE-ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-----DD 342
+ +E +R H+ + E E W+ F FF+ Y+++L + I +NA +D
Sbjct: 496 KRYKEELERAHKLLVEGAE-------WNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNND 548
Query: 343 LRN--------------------WKGWVESRLRQLTLKIERHTYNMLQCHP--------- 373
R+ W+G V SR+R L+ K+E T L P
Sbjct: 549 ARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLE--TVEQLDSAPPFPQTFDMC 606
Query: 374 -----HPGDFSDKSKPLYCSY-FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 427
HP F K+ CS F+ L + + F I ++EFK+ V + R
Sbjct: 607 GFLGLHPLAFIPKNA--LCSLTFIALDMADSKQLLRKKVF-IDAPIEEFKEMVFDWDKRT 663
Query: 428 PGMQISVAHVTRRNL 442
M + + + R+++
Sbjct: 664 EDMDLVMRAMKRKDV 678
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 39/151 (25%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M + ++ GIT P+SL + DD+ RT L +L +Y++ EEA+ RE VLGRL
Sbjct: 1 MHLPHSKKHGITGPLSLKESSQDDIARTSSLHAFLVSSKIYDTDEEAIIRERVLGRLSYM 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
VH G+DIDTLCV P + R+E FF
Sbjct: 61 FDNFIKAIGTKKGLADSDIRTATGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKE-FF 119
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKF 115
E + ML ++ E+ V DA+VP+M+ +
Sbjct: 120 EEFYVMLNDV--FAEVEKVEDAYVPLMQLVY 148
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 189/405 (46%), Gaps = 120/405 (29%)
Query: 35 LRDVNLYESQEEAVSREEVLGRLDQ----------------------------------- 59
LR +E++EEA RE VLGRL
Sbjct: 4 LRRQGTFETEEEAKRREIVLGRLASLVKRFVTRIGIKQGLSQAAAEASGGKIFTFGSYRL 63
Query: 60 -VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 118
VHGPG+DIDTLCV P+H +RE DFF + +ML V E VPDA+VP++K K SG+
Sbjct: 64 GVHGPGSDIDTLCVVPKHVSRE-DFFEDFEEMLKATEGVDEASAVPDAYVPIIKTKISGI 122
Query: 119 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
IDLL ARL+L IP+ L + D+ +R+L+
Sbjct: 123 PIDLLMARLALSSIPDTLTLQ--------DDNLLRNLDE--------------------- 153
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 238
RC LYPNA+ +VSRFF + QW WP P
Sbjct: 154 RC--------------------------------LYPNAIAGAIVSRFFIIMYQWTWPQP 181
Query: 239 VLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
VLL IEEG L ++VW+P+ P D+ H MPIITPAYP M +++NV+ ST IM +EF++G
Sbjct: 182 VLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATHNVTASTQMIMTEEFKKG 241
Query: 299 H----------------EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 342
EI + + A DW LF FF Y+ YL++ S +++
Sbjct: 242 QLEFYSPGRYLLFLAGSEIVDRVIVGSA--DWSELFSKHDFFHKYRYYLQVIASTGSSEL 299
Query: 343 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 387
W G VESR+RQL +K+E + ++ HP F + L+C
Sbjct: 300 QIKWAGTVESRIRQLVMKLE-YVDSLTLAHPFIKGF---EQVLHC 340
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 147/218 (67%), Gaps = 6/218 (2%)
Query: 118 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 177
+ IDL++ARL+++ I L++ S+L+N DE++V SLNG RVTD+IL LVP + F
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 237
LRC+++WAKRRG+ ++ G+ GG+ +A+ VARICQL+PN ++ ++F +Y +W+WP
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433
Query: 238 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST++ +E +R
Sbjct: 434 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKEELER 493
Query: 298 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 335
GH + + +W F FF+ YK++L + I
Sbjct: 494 GHRLLAEGK------EWKEFFRSTDFFQRYKSFLAVFI 525
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 39/153 (25%)
Query: 5 NGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ----- 59
+ ++ GIT P+S+ +DD+ R+ L+ +L +YE+ EEA++RE VLGRL
Sbjct: 5 HSKKYGITGPLSVKESPEDDIARSSSLQAFLLSSKIYETNEEAITRERVLGRLSYMFDNF 64
Query: 60 -------------------------------VHGPGADIDTLCVGPRHATREEDFFGELH 88
VH G+DIDTLCV P + R+E FF E +
Sbjct: 65 IKAIGTKKGLTDSDIKAASGRIYTFGSYRLGVHARGSDIDTLCVAPVYVDRKE-FFEEFY 123
Query: 89 QMLTEMPEVTELHPVPDAHVPVMKFKFSGVSID 121
ML+++ E+ V DA+VP+M+ + ID
Sbjct: 124 SMLSDV--FAEVEKVEDAYVPLMQLVYREHRID 154
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 173/293 (59%), Gaps = 46/293 (15%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+T PIS PT+ + L + LR +ES +E R+EVL +L++
Sbjct: 7 GVTPPISTTLPTEPEKRLNHALHQELRAQGTFESPQETEKRKEVLRQLEKITTVFVQRAA 66
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+GPG+D+DTL V P++ T E+ +F ++L
Sbjct: 67 AQKEPKNTFMIRDAIGRVFTYGSYRLGVYGPGSDMDTLVVAPKYVTVEQ-YFEIFPEVLV 125
Query: 93 EMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQN 146
EM +T+L PVP+A VP++KF+FSG+SIDL++ + +L +P++ + ++ +++L+
Sbjct: 126 EMAPPGAITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLLRG 185
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
E VRSLNG RVTD IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+L
Sbjct: 186 LSENEVRSLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAML 245
Query: 207 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPR 257
VAR+CQLYP A +++V++FF + +W WP PVLL IE GS + VW+P+
Sbjct: 246 VARVCQLYPKATSAVVVNKFFHIMFKWPWPLPVLLKDIEYGSPVTRVPVWNPK 298
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 202/392 (51%), Gaps = 56/392 (14%)
Query: 115 FSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 174
+SG+ +D+L+ARL IPE++D+S DS+L N DE ++RSLNG RV +Q+L+LVP F
Sbjct: 3 YSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTF 62
Query: 175 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR 234
+LR ++ WAK GVYSN GF GGI WA+LVA+ CQLYPNA PS ++ + F V++ W+
Sbjct: 63 CQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWK 122
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
WP+PV+L + C++S STL I+ +E
Sbjct: 123 WPSPVVL------------------------------KQFGCVDSKLANLKSTLHIIQEE 152
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
+ EIC+ ++K A W+ LFE FF YK+++ + I+ + G+ ES++
Sbjct: 153 MKSALEICDQIQKGNA--TWNDLFEEINFFSRYKHFVALTINEDTN------IGFFESKI 204
Query: 355 RQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 414
RQL IER++ + H +P + ++F+GL+ + + D+ ++
Sbjct: 205 RQLVQIIERNS-QVKTAHINPRKLKNIRNE--STWFLGLEFTEN-----AKNLDLTSEIE 256
Query: 415 EFKQAVSMYTLRKPG----MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 470
FK+ +M + G +Q+ +V R +L F+ G ++ R K S+ A RK
Sbjct: 257 GFKR--NMARQQSKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFVK----SKTAANRK 310
Query: 471 VSSHTKPGADDGRKRKQTDDNVDTHLRNAKCH 502
+ + + + R VD+ L K +
Sbjct: 311 RPASSGDSTETKKPRVIDMSAVDSMLLKLKSN 342
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 205 bits (522), Expect = 5e-50, Method: Composition-based stats.
Identities = 99/170 (58%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
GADID LCV PRH R DFF ++ L EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVDRS-DFFTSFYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 124 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 183
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 184 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 127/170 (74%), Gaps = 1/170 (0%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
GADID LCV PRH R DFF ++ L + EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVERS-DFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 124 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 183
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 184 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/262 (43%), Positives = 152/262 (58%), Gaps = 39/262 (14%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
+ GIT PISL P + D + T+KL + L+ ++E ++E R +LG+L+
Sbjct: 118 KHYGITSPISLVAPKETDCILTQKLIETLKPFGVFEEEKELQRRILILGKLNNLVKEWIW 177
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADID LCV PRH + DFF ++
Sbjct: 178 EISESKNLPQSVNENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVD-QSDFFTSFYEK 236
Query: 91 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 150
L EV +L V +A VPV+K F G+ ID+L+ARL+L PEDLD+ DS+L+N D +
Sbjct: 237 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTFPEDLDLHDDSLLKNLDIR 296
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR
Sbjct: 297 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWAMLVART 356
Query: 211 CQLYPNAVPSMLVS--RFFRVY 230
CQLYPNA+ S S F+ Y
Sbjct: 357 CQLYPNAIASTQTSAHYIFQTY 378
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
Query: 314 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 373
W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLKIER T MLQCHP
Sbjct: 218 WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDTDGMLQCHP 277
Query: 374 HPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 432
+P ++ D SK +C++FMGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I
Sbjct: 278 YPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYLPWKPGMDI 337
Query: 433 SVAHVTRRNLPNFVFPGGVRPSRPSK 458
V+HV RR LP FVFP G + SRPS+
Sbjct: 338 YVSHVRRRQLPGFVFPDGYKRSRPSR 363
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 96/192 (50%), Gaps = 62/192 (32%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRL-------D 58
+R GI +PIS+AGPT+ DL R +LEK R E + R + + RL D
Sbjct: 12 AKRYGIMKPISVAGPTEPDLHRNAELEKQRR--GYEERRCSGPYRSDWVKRLTRQRGYTD 69
Query: 59 Q------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL 100
Q VHGPGADIDTLCVGP + RE L EM EVTEL
Sbjct: 70 QMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNRE----------LAEMEEVTEL 119
Query: 101 HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRV 160
PVPDAHVP DLDIS S+L DEQTVRSLNGCRV
Sbjct: 120 QPVPDAHVP-------------------------DLDISNGSVLYEVDEQTVRSLNGCRV 154
Query: 161 TDQILRLVPKIQ 172
DQIL+LVP ++
Sbjct: 155 ADQILKLVPNVE 166
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 229/421 (54%), Gaps = 43/421 (10%)
Query: 17 LAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSRE-EVLGRLD-QVHGPGADIDTLCVGP 74
++ T D L+ + + +R + LY+S E+ + E V G +G +DID + + P
Sbjct: 52 ISKKTKDKLIEELR-QNIIRWLKLYQSVEQEFAGELAVFGSYRFGANGKDSDIDLIILAP 110
Query: 75 RHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE 134
RE FF +L +L+ +VT L+ + +A VP+++FKF+G+ DL++A + + P
Sbjct: 111 PQIDRELHFFQQLPSILSSNSKVTNLYCIQEAMVPLIRFKFAGIQFDLVFACVKKIMKP- 169
Query: 135 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNV 194
+SQ DE++ RSLNG +V+D + + +++ + L+ ++ WA RG+Y NV
Sbjct: 170 ---LSQSD---PVDEKSSRSLNGLKVSDYFSKYCHQ-KSYLSFLKFIKAWAINRGIYGNV 222
Query: 195 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQV 253
G+LGGI+W +L +I QLYPN L+ RFF +++QW+W PV++ +E +
Sbjct: 223 MGYLGGISWQILTHKIFQLYPNYSVQGLIERFFFIFSQWKWNELPVVIQKCDE------I 276
Query: 254 WDPRRNP-----KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN 308
W RN + ++++M I+TP YP +NS+YNVS T I+ ++ + + I + + +
Sbjct: 277 W---RNSLFEQQQKQHNVMSILTPVYPYINSAYNVSNCTFTIIEEQLKLANIIMQKICLS 333
Query: 309 EADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN- 367
E + W L + FF+ Y YL+I ++N DDL WK +ES+LR+L ++ N
Sbjct: 334 E--LQWSDLLKKIQFFDIYYTYLQIRALSKNKDDLIQWKSHIESKLRKLNKMLDEGDVNK 391
Query: 368 MLQCHPHP---------GDFSDKSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKE 415
++ H +P GD +D L+ S+F G++ K V E+ DI +++
Sbjct: 392 AIEFHLYPKSFQTDYVQGDENDTPGSLFNFSESFFYGIRIKDEELV--KEKLDIENIIRQ 449
Query: 416 F 416
F
Sbjct: 450 F 450
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 126/170 (74%), Gaps = 1/170 (0%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
GADID LCV PRH R DFF ++ L EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRHVDRS-DFFTSXYEKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 124 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 183
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 184 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 163/271 (60%), Gaps = 20/271 (7%)
Query: 82 DFFGELHQM-LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 140
D F EL + L+E+ +VT L+PVP A VPV+K KF GV +D+LY L+ + +D +
Sbjct: 4 DAFFELFPLKLSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPAD 63
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
D++L DE++ RS+NG RV+D I VP +F LR +R WA+RRG+YSN G+LGG
Sbjct: 64 DNLLCGMDEKSARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLGG 123
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW---PNPVLLCAIE----EGSLGLQV 253
++WA+LVAR+CQL+PN PS LV RFFRVY++W W V+L E EG +V
Sbjct: 124 VSWAILVARVCQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKV 183
Query: 254 W--DPRRNPKDK-----YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAME 306
W P+R D+ M +ITPAYP MNS++ V+ ++ + E +RG I +
Sbjct: 184 WCPPPKRTTTDQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKG 243
Query: 307 KNEADVD-WDTLFEPFTFFE----AYKNYLR 332
+ + W+TL EP FF+ YK +L+
Sbjct: 244 VDLRSRECWETLLEPIHFFDYDQGGYKQFLQ 274
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 179/345 (51%), Gaps = 45/345 (13%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V +D+D LCVGP + FF EL L + ++ V DA VPV+K + +GV
Sbjct: 788 VQTADSDVDALCVGPDTMSCSR-FFMELRVALEKTKKLQSAREVHDAKVPVLKLQINGVE 846
Query: 120 IDLLYARLSLWVI---PEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRT 176
+DLLY V P +D D L+ + +RS++GCR D ILR VP + +F+T
Sbjct: 847 VDLLYGPYPSSVPITPPSQID---DRSLRKFEPAVLRSISGCRDGDAILRSVPNVSHFQT 903
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC---QLYPN-----------AVPSML 222
LR ++ WAKRRG+YSN GFLGG +W++LVA +C +LY ++ L
Sbjct: 904 VLRAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERL 963
Query: 223 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 282
++ FF VY W W PV AI GS R P K MPI+TP P NS+ N
Sbjct: 964 LAEFFEVYNHWDWQQPV---AITPGSA-------RYKPGHKSDKMPIVTPTPPFNNSARN 1013
Query: 283 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 342
V+ STL M EF R +I +A + N ++ + L +P FF+ Y YL +++ + ++D+
Sbjct: 1014 VARSTLTEMQQEFFRAFDITQASQWN-SEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDE 1072
Query: 343 LRNWK-------GWVESRLRQLTLKIER--HTYNMLQCHPHPGDF 378
+ W GW+ESRL L +E+ TY P PG F
Sbjct: 1073 VTKWPTNFSLSLGWLESRLIALIFDLEKNPQTY----ARPFPGTF 1113
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 171/273 (62%), Gaps = 16/273 (5%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMP-EVTELHPVPDAHVPVMKFKFSGVSIDLL 123
+DID V PR TREE FF +ML + E+T+L +P A+VPV++ + +D++
Sbjct: 108 SDIDLCFVAPRWVTREE-FFTGFPRMLEQYSHEITKLSVLPSAYVPVIRATCHDIQVDIV 166
Query: 124 YARLSLWVIPEDLDISQDSILQN--ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 181
+AR + I +LD+ + +++ +D + VRSLNG RVT+ +LR VP+ + F+ L+ +
Sbjct: 167 FARTEVDEISRELDLLAGANIESLISDIRCVRSLNGYRVTEMVLRFVPRYRVFQLALKAI 226
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 241
R+WAK + +YS+ G+LGG++WA+LVA++C ++P A + ++++FF V +QWRWP PV+L
Sbjct: 227 RYWAKCQKIYSHTLGYLGGVSWAILVAKVCTMFPKAGAARILNKFFLVMSQWRWPEPVML 286
Query: 242 CAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
+ EG + Q+W + P D +MPIITP YP NSS+NVS STL +M + G
Sbjct: 287 --LPEGYGVSSQLWSITQMPWD---IMPIITPVYPQQNSSFNVSKSTLLVMKNALTEGVR 341
Query: 301 ICE--AMEKNEADVDWDTLFEPFTFFEAYKNYL 331
I + ME+ DW + F P + Y++Y+
Sbjct: 342 ITDDILMER----CDWKSFFHPVHIADMYEHYV 370
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 198/398 (49%), Gaps = 76/398 (19%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------------- 60
A D R++ L ++ + S EE + R+ V+ LD++
Sbjct: 72 AAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQREQYW 131
Query: 61 ----------------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP 104
+GP +DID +CVGP A+ + FF L QML E PEV++LH +
Sbjct: 132 NTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIE 191
Query: 105 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 164
+A +I RL L +E + R L+G RV QI
Sbjct: 192 NAK-----------AIHAFDPRL----------------LAAVNEPSWRCLSGVRVNRQI 224
Query: 165 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 224
++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L +
Sbjct: 225 MQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFN 284
Query: 225 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 284
FF +++ W WP PV L +++ + W P MPI+ P P + +++
Sbjct: 285 SFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSIT 333
Query: 285 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 344
ST + +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR
Sbjct: 334 RSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELR 391
Query: 345 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 392 DWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 182/372 (48%), Gaps = 73/372 (19%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------------------- 60
D RT L ++L+D S E RE+V+ +L+++
Sbjct: 17 DSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPRRATATV 76
Query: 61 ----------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 110
HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A
Sbjct: 77 LTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESA---- 132
Query: 111 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 170
+ + S +LQ D ++ RSL+G RV +QI++LVP
Sbjct: 133 -----------------------KAIITSNPHLLQKLDSRSWRSLSGVRVNEQIVQLVPN 169
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 230
Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF ++
Sbjct: 170 AQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDIF 229
Query: 231 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 290
W W PV SL Q + RR P + MPI+ P P + N++ T +
Sbjct: 230 AHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFKK 278
Query: 291 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 350
+ +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W GWV
Sbjct: 279 IREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWV 336
Query: 351 ESRLRQLTLKIE 362
+SR R L LK+E
Sbjct: 337 KSRFRNLILKLE 348
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 197/398 (49%), Gaps = 76/398 (19%)
Query: 18 AGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------------- 60
A D R++ L ++ + S EE + R+ V+ LD++
Sbjct: 72 AAAERTDAFRSKSLLNFISRTGVLPSPEEELKRQVVVRELDKIVMGWAKRVAYDQREQYW 131
Query: 61 ----------------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP 104
+GP +DID +CVGP A+ + FF L QML E PEV++LH +
Sbjct: 132 NTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIE 191
Query: 105 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 164
+A +I RL L +E + R L+G RV QI
Sbjct: 192 NAK-----------AIHAFDPRL----------------LAVVNEPSWRCLSGVRVNRQI 224
Query: 165 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 224
++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L +
Sbjct: 225 MQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFN 284
Query: 225 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 284
FF +++ W WP PV L ++ + W P MPI+ P P + +++
Sbjct: 285 SFFDIFSHWHWPLPVSL--FDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSIT 333
Query: 285 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 344
ST + +E QRG + + ++N D++W LF PF + YK++LRI +SA A++LR
Sbjct: 334 RSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELR 391
Query: 345 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 392 DWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 177/330 (53%), Gaps = 47/330 (14%)
Query: 59 QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGV 118
+ +GP +DID +CVGP A+ + FF L QML E PEV++LH + +A
Sbjct: 169 KAYGPESDIDAVCVGPCIASLQHHFFIVLRQMLEERPEVSDLHSIENAK----------- 217
Query: 119 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
+I RL L +E + R L+G RV QI++L+P I+ F+ L
Sbjct: 218 AIHAFDPRL----------------LAAVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILL 261
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 238
RC++ WA++RG++ ++ GF GI+ A+L A +C ++P+A S L + FF +++ W WP P
Sbjct: 262 RCLKLWARKRGLHCHLLGFFAGIHLAILAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLP 321
Query: 239 VLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
V L +++ + W P MPI+ P P + +++ ST + +E QRG
Sbjct: 322 VSL--LDQPT----PWRPH-----CCSFMPIVMPCSPPEFCASSITRSTFNKIKEELQRG 370
Query: 299 HE-----ICEAMEKNE-ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 352
+C + + D++W LF PF + YK++LRI +SA A++LR+W GWV+S
Sbjct: 371 FALTKLGVCTVEQGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEELRDWVGWVKS 430
Query: 353 RLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
R R L LK+E + C P P + +D S
Sbjct: 431 RFRNLLLKLESIG---VDCDPDPSEQADHS 457
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 123/170 (72%), Gaps = 1/170 (0%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
GADID LCV PR R DFF ++ EV +L V +A VPV+K F G+ ID+L
Sbjct: 2 GADIDALCVAPRXVDRS-DFFTSFYEKXKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDIL 60
Query: 124 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 183
+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+IL LVP I NFR TLR ++
Sbjct: 61 FARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKL 120
Query: 184 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
WAKR +YSN+ GF GG++WA+LVAR CQLYPNA+ S LV +FF V+++W
Sbjct: 121 WAKRHNIYSNILGFXGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKW 170
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 6/212 (2%)
Query: 170 KIQN-FRTTLRCMR-FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 227
K+QN F + R WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FF
Sbjct: 36 KVQNNFESPAETERSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFF 95
Query: 228 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 287
R+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST
Sbjct: 96 RIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMST 155
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNW 346
+++ E QRG +I + + + + W+ LF TFF + YK YL I S+ + W
Sbjct: 156 KAVILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVW 213
Query: 347 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
G VES++R L ++R + HP P F
Sbjct: 214 SGLVESKIRHLVGALDRKA-TIAIAHPFPKGF 244
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 387 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 445
+Y++GL+ K P G DI + FK + + +PG+ +++ HV +LP
Sbjct: 314 TTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPED 372
Query: 446 VF-PGGVRPSRP 456
VF PG RP+RP
Sbjct: 373 VFQPGETRPTRP 384
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 137/236 (58%), Gaps = 37/236 (15%)
Query: 2 GSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ-- 59
G ++LG+T ISLA P +DL RT +L L N++ESQ+E R E+L +L+
Sbjct: 21 GGPPAKQLGMTSAISLAEPRPEDLQRTDELRGSLEPYNVFESQDELNHRMEILAKLNTLV 80
Query: 60 ----------------------------------VHGPGADIDTLCVGPRHATREEDFFG 85
VH GADID LCV PR+ R D+F
Sbjct: 81 KQWVKEISVSKNMPESAAEKLGGKIYTFGSYRLGVHHKGADIDALCVAPRNIERT-DYFQ 139
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQ 145
++L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+
Sbjct: 140 SFFEVLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLR 199
Query: 146 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
N D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+
Sbjct: 200 NLDHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 130/206 (63%), Gaps = 6/206 (2%)
Query: 176 TTLRCM--RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
T L C WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ +W
Sbjct: 3 TGLLCAPSSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKW 62
Query: 234 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 293
WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +++
Sbjct: 63 AWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILR 122
Query: 294 EFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVES 352
E QRG +I + + + + W+ LF TFF + YK YL I S+ + W G VES
Sbjct: 123 ELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVES 180
Query: 353 RLRQLTLKIERHTYNMLQCHPHPGDF 378
++R L ++R + HP P F
Sbjct: 181 KIRHLVGALDRKA-TIAIAHPFPKGF 205
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 380 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHV 437
D + +Y + Y++GL+ K P G DI + FK + + +PG+ +++ HV
Sbjct: 267 DDTHVMYTTTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHV 325
Query: 438 TRRNLPNFVF-PGGVRPSRP 456
+LP VF PG RP+RP
Sbjct: 326 RNFDLPEDVFQPGETRPTRP 345
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 237/464 (51%), Gaps = 50/464 (10%)
Query: 6 GQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSR---EEVLGRLDQVHG 62
GQ L E SL +++ +++ ++ YL + SQ+ A + E+ L V
Sbjct: 48 GQLLSFIETDSLQA-IEENQQKSKDIQAYLGQIVKRWSQQCAKEKRINEDHLKYCSAVLL 106
Query: 63 P-----------GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVM 111
P +DID +C+ P R E FF L +L+ + +++ + P++
Sbjct: 107 PYGSVLLGVADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKIESTSNPII 166
Query: 112 KFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN---ADEQTVRSLNGCRVTDQILRLV 168
K + G ID+ +A+L+ +PE++D + D + +N ++++++ +LNG + I + +
Sbjct: 167 KMIYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSMYALNGRKNGILISKSM 226
Query: 169 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 228
P F LR ++ WAK+R V SN+ G+LGGI+WA+L+A+ICQL+P VS FF+
Sbjct: 227 PDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDLCQTVSLFFQ 286
Query: 229 VYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKDKYHLMPIITPAYPCMNSSYNVSTST 287
+Y+QW W PV++ E+ + + D +RN K +M IITPAYP N+++ V T
Sbjct: 287 IYSQWNWKVPVVIDESEQEIICYYLQDEDKRNDK----IMQIITPAYPFFNTTFKVHKIT 342
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 347
+ + EFQ G + DW+ + PF FF+ ++ ++ + I ++ +++ W
Sbjct: 343 FQTIFQEFQIGAQKLG---------DWNEVLRPFDFFDCFQYFVALSIVSKTSENFHKWT 393
Query: 348 GWVESRLRQLTLKI---ERHTYNM----LQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVP 400
G+ E++L +L LK+ Y+ L+ P + ++ +YF+G+++ +
Sbjct: 394 GFCEAQLPKL-LKLVGNNEEVYDTKSFELRITPEGEENLERDHAKSLTYFLGIKKLK--- 449
Query: 401 VGEGEQFDIRLTVKEFKQAVSMYTLR------KPGMQISVAHVT 438
E +RL + +F ++ L+ + M+I VA+VT
Sbjct: 450 -QEAWPLFLRLPITQFAIELNQRKLQSFKNEDEFNMKIYVANVT 492
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 180/372 (48%), Gaps = 74/372 (19%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------------------- 60
D RT L ++L+D S E RE+V+ +L+++
Sbjct: 17 DSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPRRATATV 76
Query: 61 ----------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 110
HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A
Sbjct: 77 LTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESA---- 132
Query: 111 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 170
+ + S +LQ D + RSL+G RV +QI++LVP
Sbjct: 133 -----------------------KAIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPN 169
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 230
Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP + L + FF ++
Sbjct: 170 AQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINGLFTIFFDIF 229
Query: 231 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 290
W W PV SL Q + RR P + MPI+ P P + N++ T +
Sbjct: 230 AHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFKK 278
Query: 291 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 350
+ +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W GWV
Sbjct: 279 IREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWV 336
Query: 351 ESRLRQLTLKIE 362
+SR L LK+E
Sbjct: 337 KSRF-NLILKLE 347
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 219/487 (44%), Gaps = 112/487 (22%)
Query: 60 VHGPGA-DIDTLCVGPRHATREEDFFGELHQMLT-----EMPEVTELHPVPDAHVPVMKF 113
VH PG+ D+D L + P H +R E FF ++L+ T++H +P A+ PV+K
Sbjct: 171 VHRPGSSDLDVLVIAPPHCSRNE-FFTSFVELLSTPANGSQNTFTQIHAIPTAYTPVLKC 229
Query: 114 KF-SGVSIDLLYA------RLSLW------------VIPEDLDISQ-------------- 140
++ S + +D+L+ +L W +P+ L Q
Sbjct: 230 QYASSLPMDMLFVSVADPTKLIAWRQQSSMKADSRMTLPQHLPPWQPGVDAEAGAGGSIY 289
Query: 141 -------------------------DSILQNADEQTVRSLNGCRVTDQILRLVPKI--QN 173
DS L + D VRSLNG RVT +L LV + +
Sbjct: 290 PKFEEPHTNEQASTTTTTALYYRIDDSDLCDQDPAGVRSLNGARVTQTLLDLVIPVGLER 349
Query: 174 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
F+ L ++ WA+ +GVYSNV GF GG+NWA+LVA +C+ YP + + V FF + W
Sbjct: 350 FQMVLLMVKAWARAQGVYSNVLGFWGGVNWAILVAYVCRAYPESSIADTVQLFFETFANW 409
Query: 234 RWPNPVLLCAIEEGSLG--------LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 285
+WP PV L + + S+ L W+P + +D H+ PI+TPAYP MNSSYNV+
Sbjct: 410 KWPTPVSLIDLNDASITTPPPGAAVLPSWNPAIHIRDGLHVCPILTPAYPVMNSSYNVAL 469
Query: 286 STLRIMMDEFQ-RGHEICEAMEKNEA----------DVDWDTLFEPFT-FFEAYKNYLRI 333
LR M + Q H+I ++++ + W L+ + +++Y+
Sbjct: 470 PQLRRMTEALQYTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLWSLNAGWVFRHQHYVHA 529
Query: 334 DISAENADDLRNWKGWVESRLRQLTLKIE---RHTYNMLQCHPHPGDFSDKSKPLY---- 386
I A + W VESRLR L +E H + PH G F ++ P+
Sbjct: 530 TIRAPQGEAFVTWFRLVESRLRVLISSLETPDSHAW------PH-GRFFYRNVPIAPYDE 582
Query: 387 ------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRR 440
+F+GL+ V + D+R +F + V+ + R M +S+ HVT
Sbjct: 583 LNGLREAHFFIGLRFASHV-----DTADVRTLTLDFLRQVNGWIGRDSSMDLSLGHVTLP 637
Query: 441 NLPNFVF 447
NLP FV
Sbjct: 638 NLPRFVL 644
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 211/401 (52%), Gaps = 38/401 (9%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V +DID +C+ P R E FF L +L+ + +++ + P++K + G
Sbjct: 91 VADSKSDIDLICIAPEFIDRREQFFNGLFYLLSNEQGMEQINKIESTSNPIIKMIYKGFH 150
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQN---ADEQTVRSLNGCRVTDQILRLVPKIQNFRT 176
ID+ +A+L+ +PE++D + D + +N ++++++ +LNG + I + +P F
Sbjct: 151 IDINFAQLNSDRVPENIDDNLDELRRNLLQSEDKSLYALNGRKNGILISKSMPDHSQFVQ 210
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWP 236
LR ++ WAK+R V SN+ G+LGGI+WA+L+A+ICQL+P VS FF++Y+QW W
Sbjct: 211 ALRIIKQWAKKRKVSSNIIGYLGGISWAILMAKICQLFPRVDVCQTVSLFFQIYSQWNWK 270
Query: 237 NPVLLCAIEEGSLGLQVWD----PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 292
PV++ E+ + ++ + R K +M IITPAYP N+++ V+ T + +
Sbjct: 271 IPVVIDESEQDFIQIETFKTLCWKRDEDKRNDKIMQIITPAYPFFNTTFKVNKITFQTIF 330
Query: 293 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVES 352
EFQ G + DW+ + P FF+ ++ ++ I I ++++++ W G+ E+
Sbjct: 331 QEFQIGAQKLG---------DWNEVLRPLDFFDCFQYFVAISIVSKSSENFHKWTGFCEA 381
Query: 353 RLRQLTLKIERH-------TYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQ-------- 397
+L +L LK+ H T L+ P + ++ +YF+G+++ +
Sbjct: 382 QLPKL-LKLIGHNEAIYDNTSFELRITPDGEENLERDYAKSLTYFLGIKKLKPDAWPLFL 440
Query: 398 GVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 438
+P+ QF I L ++ + S + M+I VA+VT
Sbjct: 441 RIPIT---QFAIELNQRKLQ---SFKNEEEFNMKIYVANVT 475
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 379
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 380 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 432
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 433 SVAHVTRRN----LPNFVF 447
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 379
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 380 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 432
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 433 SVAHVTRRN----LPNFVF 447
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 152/260 (58%), Gaps = 23/260 (8%)
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 263
A+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 323
YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE F
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNF 118
Query: 324 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDF 378
F+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 178
Query: 379 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQ 431
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+
Sbjct: 179 PDKEE-FRTMWVIGLVFKKT-ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMK 233
Query: 432 ISVAHVTRRN----LPNFVF 447
I+ HV R+ LPN V
Sbjct: 234 IAAMHVKRKQLHQLLPNHVL 253
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 152/261 (58%), Gaps = 16/261 (6%)
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 264
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 265 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 324
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKA--EWSKLFDAPNFF 118
Query: 325 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 379
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + S
Sbjct: 119 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPSPSENS 178
Query: 380 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISV 434
+K + + +GL K+ + E D+ ++ F +QA++ ++I+
Sbjct: 179 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFET-EIKIAA 235
Query: 435 AHVTRRNLPNFVFPGGVRPSR 455
HV R+ L + + P V P +
Sbjct: 236 MHVKRKQL-HQLLPSHVLPKK 255
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 161/308 (52%), Gaps = 39/308 (12%)
Query: 58 DQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSG 117
DQ +GP +DID LC+GP AT + FF L QML PEV+EL + A VP+M+FKF+G
Sbjct: 211 DQAYGPESDIDVLCIGPYIATLQHHFFVVLRQMLEGRPEVSELQSIEGAKVPLMRFKFNG 270
Query: 118 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 177
+ +D Y +L E + +L+N D + R L+G R QI++LVP ++
Sbjct: 271 ILVDFPYVQLPFINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMK----- 325
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 237
+ GF GI+ A+L A +C+ +PNA + L+S FF ++ W WP
Sbjct: 326 ----------------LLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFAHWPWPL 369
Query: 238 PVLLCAIEEGSLGLQVWDPR---RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
PV L DP R P D LMPI+ P P S + + ST + +E
Sbjct: 370 PVSLL------------DPPVLCRGP-DGCSLMPIMLPCNPPEFCSSSTTESTFSKIKEE 416
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
+RG+ + + + D DW LF F + YK +LRI +SA ++LR+W GWV+SR
Sbjct: 417 LRRGYALTK--DTRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRF 474
Query: 355 RQLTLKIE 362
R L LK+E
Sbjct: 475 RNLLLKLE 482
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 151/261 (57%), Gaps = 25/261 (9%)
Query: 205 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--RNPKD 262
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 263 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 322
+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPN 118
Query: 323 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGD 377
FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE 178
Query: 378 FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGM 430
DK + + +GL K+ E D+ ++ F +QA++ M+ + M
Sbjct: 179 NPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DM 233
Query: 431 QISVAHVTRRN----LPNFVF 447
+I+ HV R+ LPN V
Sbjct: 234 KIAAMHVKRKQLHQLLPNHVL 254
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 27/266 (10%)
Query: 197 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-------SL 249
FLGG++WA+LVAR CQLYPNA P+ L+ +FF V+T+W WP+PVLL ++ S
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 250 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 309
VWDPR D+YHLMPIITPA+P NS++NV+ ST +++M+E + G I +E
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAI--TIEILS 167
Query: 310 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 369
+W LF+ FF YK+++ + A N +D W G VES++R L +ER+ L
Sbjct: 168 GKAEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL 227
Query: 370 QCHPHPGDFSDKS---------KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 420
CH +P F+ S P +F+G++ + + + D+ +++F AV
Sbjct: 228 -CHINPQHFTPISPLPIEISIENPCCQMWFIGMELNKQL----KKNIDLTDEIQQFNDAV 282
Query: 421 ----SMYTLRKPGMQISVAHVTRRNL 442
+ PGM + ++V R +L
Sbjct: 283 MRAADFQNVYCPGMAVLPSYVRRADL 308
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 199/406 (49%), Gaps = 34/406 (8%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V D+D +C+ P R + F G+L+ M++ M V + V DA VP+M+F+ GV
Sbjct: 217 VSSVDGDVDLVCIAPNFVDRFKHFNGQLYDMISNMDGVEYHNNVIDAKVPIMQFEIQGVP 276
Query: 120 IDLLYARLSLWVIPEDLDIS-QDSILQNADEQTVRSLNGCRVTDQILRLVPK-------- 170
ID+ +A+L + +P+D+D D+ L DE+ S+NG R I+R V +
Sbjct: 277 IDISFAQLDVETLPDDIDKQIPDTHLTMMDERDKLSINGYRCNQAIIRYVTEHSEDKQQS 336
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 230
Q F+ +L+ ++ WA+ G+Y N G+LGGI+WALL+A+ICQ++PN + ++ +FF Y
Sbjct: 337 KQRFQESLKVIKIWARNNGIYENRLGYLGGISWALLLAKICQMFPNLEVNGIIEQFFLQY 396
Query: 231 TQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 289
+ W+WP VLL + P K++ M I TPAYP NS+ V L
Sbjct: 397 SSWKWPTMEVLLGPFSQ---------PEERQKNQKFEMSIYTPAYPEYNSTERVKKINLE 447
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID-ISAENADDLRNWKG 348
I+ + + + I + E WD L + F Y ++ ID I E + +R +K
Sbjct: 448 IIDYKIKEANRIIQE-EIKTGQAPWDRLIQEEDFLNKYTKFIEIDLIRIERDETMREFKT 506
Query: 349 WVES---RLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPLYCSYFMGLQRKQGVPVGE 403
+ +L L + L+ P P + D+ P ++ +G++ K +
Sbjct: 507 QQDKLSVKLLTLFEFFSQKKPQELEIRPWPFFYKKKDQKYPQCSAFLIGIKAKSHI---- 562
Query: 404 GEQFDIRLTVKEF--KQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 447
E++ + ++EF +Q S+ L I V T+++L + F
Sbjct: 563 QEEYSFKNCIQEFAMQQRKSLDAL--TNCMIRVFQATKQDLNDIAF 606
>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
Length = 388
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 107/165 (64%), Gaps = 36/165 (21%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+TEPISL+GPT+ LM+T ++EKYL D LYE Q+EA+ REEVLG+LDQ
Sbjct: 149 GVTEPISLSGPTEKYLMQTDEVEKYLSDARLYERQDEAILREEVLGKLDQTVKAWIKKAT 208
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VHGP ADIDTLCVGPRHATR E FF LH +L E
Sbjct: 209 RINGYGEQFVHEANAKTFTFGSYCLGVHGPDADIDTLCVGPRHATRNEYFFRWLHDILAE 268
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 138
MPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPE +I
Sbjct: 269 MPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPESREI 313
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 201 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 260
+ WA++VARICQLYPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
DK H MPIITPAYP M +++N++ ST I++ E R EI + + + W LF+
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQK 118
Query: 321 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
FF YK+YL I +A+ A+ W G VES+LR L ++E
Sbjct: 119 HDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 160
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 192/426 (45%), Gaps = 55/426 (12%)
Query: 41 YESQEEAVSREEVLGRLDQV------------------HGPGADIDTLCVGPRHATREED 82
+ES E +R + + RL++V G G+D+D + +GP H +RE D
Sbjct: 673 WESSEAHRARIQAVKRLNEVCSRLGLELYPYGSFLMGTSGTGSDVDAVVIGPAHLSRE-D 731
Query: 83 FFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDIS 139
F G L Q LT+ + + DA +P++K GV D+ YA V P +L
Sbjct: 732 FAGALLQALTQEKDCEGARFIADAAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLAR 791
Query: 140 QDSILQNADEQTVRSLNGCRVTDQILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVA 195
Q L D RSL G TD +L V + ++ FRT LR ++ WAK RGVYS+
Sbjct: 792 QGERL---DLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHAL 848
Query: 196 GFLGGINWALLVARICQLYP---NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ 252
G+LGG +WA+L A C P + L+ FF ++ W WP PV L G+
Sbjct: 849 GYLGGFSWAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLT---PGTA--- 902
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 312
R P+ K MP++ PA P N++ NVS STLR++ +E R E +
Sbjct: 903 ----RYVPEGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAE 958
Query: 313 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 372
WD LF P + + + A+ +D + GW+ L L ++E L+
Sbjct: 959 AWDALFAPVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPF 1018
Query: 373 PHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKP 428
P S+P + +GL QG G+ ++ + EF+++ ++ R P
Sbjct: 1019 P-------PSQP-EGPFRIGLS-AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPP 1069
Query: 429 GMQISV 434
G +SV
Sbjct: 1070 GASLSV 1075
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 170/372 (45%), Gaps = 92/372 (24%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------------------- 60
D RT L ++L+D S E RE+V+ +L+++
Sbjct: 60 DSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAYEQRVPPRRATATV 119
Query: 61 ----------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 110
HGP +DID LCVGP AT + FF L Q+L + PEV+EL V A +
Sbjct: 120 LTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVESAKAII 179
Query: 111 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 170
S +LQ D + RSL+G RV +QI++LVP
Sbjct: 180 T---------------------------SNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPN 212
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 230
Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A +CQ YP ++
Sbjct: 213 AQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINV--------- 263
Query: 231 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 290
SL Q + RR P + MPI+ P P + N++ T +
Sbjct: 264 -----------------SLHGQPTNCRR-PDGSF--MPILLPCTPPEFCTSNMTKGTFKK 303
Query: 291 MMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 350
+ +E RG+ + + E D +W LF PF + Y+ +LRI + A +++LR+W GWV
Sbjct: 304 IREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDWAGWV 361
Query: 351 ESRLRQLTLKIE 362
+SR L LK+E
Sbjct: 362 KSRF-NLILKLE 372
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 192/426 (45%), Gaps = 55/426 (12%)
Query: 41 YESQEEAVSREEVLGRLDQV------------------HGPGADIDTLCVGPRHATREED 82
+ES E +R + + RL++V G G+D+D + +GP H +RE D
Sbjct: 617 WESSEAHRARIQAVKRLNEVCSRLGLELYPYGSFLMGTSGTGSDVDAVVIGPAHLSRE-D 675
Query: 83 FFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDIS 139
F G L Q LT+ + + DA +P++K GV D+ YA V P +L
Sbjct: 676 FAGALLQALTQEKDCEGARFIADAAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLAR 735
Query: 140 QDSILQNADEQTVRSLNGCRVTDQILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVA 195
Q L D RSL G TD +L V + ++ FRT LR ++ WAK RGVYS+
Sbjct: 736 QGERL---DLAGFRSLTGWADTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHAL 792
Query: 196 GFLGGINWALLVARICQLYP---NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ 252
G+LGG +WA+L A C P + L+ FF ++ W WP PV L G+
Sbjct: 793 GYLGGFSWAVLTAWACMRAPRDSSRTEEQLLDYFFEMFAAWPWPLPVTLTP---GTA--- 846
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 312
R P+ K MP++ PA P N++ NVS STLR++ +E R E +
Sbjct: 847 ----RYVPEGKRDQMPVVAPALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAE 902
Query: 313 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 372
WD LF P + + + A+ +D + GW+ L L ++E L+
Sbjct: 903 AWDALFAPVEIPGPTAAQVVVSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPF 962
Query: 373 PHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKP 428
P S+P + +GL QG G+ ++ + EF+++ ++ R P
Sbjct: 963 P-------PSQP-EGPFRIGLS-AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPP 1013
Query: 429 GMQISV 434
G +SV
Sbjct: 1014 GASLSV 1019
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 121/181 (66%), Gaps = 2/181 (1%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
HGP +DID LC+GP AT + FF L Q+L PEV+E+H V A VP+M+F+F+G+++
Sbjct: 148 HGPESDIDLLCLGPCIATLQYHFFVVLRQILQGRPEVSEVHTVEKAKVPLMRFRFTGIAV 207
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
DL YA+L + + ++ +LQ D ++ RSL+G RV +QI++LVP + F+T LRC
Sbjct: 208 DLTYAQLPVIDALKAINTFSPQLLQKIDTRSWRSLSGVRVNEQIVQLVPNAEKFQTLLRC 267
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW--PNP 238
++ WA++RG++ + GF GI+ A+L A +C+ +P+A S L + FF+ + W W P+P
Sbjct: 268 IKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPDP 327
Query: 239 V 239
+
Sbjct: 328 L 328
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 18/345 (5%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+G +DID V TR+ DF+ L+ L P+V EL +P P + + +
Sbjct: 70 VYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLSMIYLNIE 128
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI--QNFRTT 177
DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP + FR
Sbjct: 129 FDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVM 188
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW-P 236
+R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY+ W W
Sbjct: 189 VRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLR 248
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
PV+L ++ N K K ++ I+TPA P N++++++ +L ++ E +
Sbjct: 249 TPVMLGTNDDF-----------NDKKKEGIIQILTPASPSENAAFSITKFSLEMIKRELK 297
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 356
RG EI +E DW LF+P F Y ++ +++ + + L G ES L
Sbjct: 298 RGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVN 356
Query: 357 LTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 401
L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 357 L-MKGLSEIEEIIEANVIPNGFLDEENERYF-YYVGMNVKRDCPV 399
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 18/345 (5%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+G +DID V TR+ DF+ L+ L P+V EL +P P + + +
Sbjct: 70 VYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLSMIYLNIE 128
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI--QNFRTT 177
DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP + FR
Sbjct: 129 FDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVM 188
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRW-P 236
+R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY+ W W
Sbjct: 189 VRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLR 248
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
PV+L ++ N K K ++ I+TPA P N++++++ +L ++ E +
Sbjct: 249 TPVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLEMIKRELK 297
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 356
RG EI +E DW LF+P F Y ++ +++ + + L G ES L
Sbjct: 298 RGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVN 356
Query: 357 LTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 401
L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 357 L-MKGLSEIEEIIEANVIPNGFLDEENEKYF-YYVGMNVKRDCPV 399
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 178/350 (50%), Gaps = 22/350 (6%)
Query: 56 RLDQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKF 115
RLD V+G ADID CV EDFF +L++ L P+V E+ + P++ +
Sbjct: 67 RLD-VYGNNADIDA-CVVTNSTIEREDFFNDLYEDLKNNPDVREIRQIKSVRAPILTMTY 124
Query: 116 SGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP--KIQN 173
+ IDL +AR + +P+++DI + IL DE + R++NG R TD I VP ++
Sbjct: 125 MKIDIDLNFARTAHTTLPKEMDILSERILDEMDELSTRAINGRRNTDMINNFVPPHSVEA 184
Query: 174 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
F+ +R ++ W+K+RG+Y V +L GI+ +LVA++ L+ +FF Y W
Sbjct: 185 FKVIVRAIKMWSKKRGIYGYVYSYLNGISIEILVAQVISENYQLDNVRLLEKFFHAYATW 244
Query: 234 RWP-NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 292
W NPV+L ++ R + K ++ +ITPA P NS YN++ S+L ++
Sbjct: 245 DWARNPVMLGVSDD-----------RPERKKEEMVQVITPAAPRENSMYNMTRSSLELLK 293
Query: 293 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-DDLRNWKGWVE 351
E RG I + K+E DW+ LF+ F Y Y+ ++ S + + L N G E
Sbjct: 294 REMLRGERIVKGY-KSEGGNDWNLLFKKRHCFCGY--YIFVEFSVRGSLESLENKIGMFE 350
Query: 352 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 401
S++ + +E +++ + P + + + Y++G+ K+ + V
Sbjct: 351 SKIVRFVRSLEEME-EVIEVNVIPEGYLEVENAV-DYYYVGMNVKKDLLV 398
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 18/345 (5%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V+G +DID V TR+ DF+ L+ L P+V EL +P P + + +
Sbjct: 70 VYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLSMIYLNIE 128
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI--QNFRTT 177
DL ++R + +P++LDI ++IL+N DE R++NG R TD I VP + FR
Sbjct: 129 FDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVRNTDIIDAFVPNHSEEAFRVM 188
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 237
+R ++ W K+RG+Y V FL GI+ +LVA++ L+ +FF+VY+ W W
Sbjct: 189 VRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVISENYQLDNVRLLEKFFQVYSSWDWLR 248
Query: 238 -PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
PV+L ++ N K K ++ I+TPA P N++++++ +L ++ E +
Sbjct: 249 APVMLGTNDDF-----------NDKKKEGVIQILTPASPSENAAFSITKFSLELIKRELK 297
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 356
RG EI +E DW LF+P F Y ++ +++ + + L G ES L
Sbjct: 298 RGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEGLTTTIGKFESGLVN 356
Query: 357 LTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 401
L +K +++ + P F D+ Y Y++G+ K+ PV
Sbjct: 357 L-MKGLSEIEEIVEANVIPNGFLDEENEKYF-YYVGMNVKRDCPV 399
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 137/244 (56%), Gaps = 16/244 (6%)
Query: 185 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 244
A +RG+Y NV G+LGG+N ALL LYPNA S+++ FR++ +W W PVL+ +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 245 E---EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 301
+ E VW+P+ N + + L PI+TP YP NS+YNV ST +M+ EF+R ++
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 302 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI 361
++ K E W TLF+ F FF +YK Y++I++SA+ ++ NW G+VES++R+ T I
Sbjct: 229 TLSILKGET--TWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMI 286
Query: 362 ERHTYNMLQCHPHPGD--------FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 413
E + ++ +P D + PL +++ + +G+ D+ L
Sbjct: 287 EGNKSIVIHVYPTSFDVVRERGSSYVQPDSPLCKQFYIAFTPLEA---AKGKPLDLSLAT 343
Query: 414 KEFK 417
++FK
Sbjct: 344 RQFK 347
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 31 LEKYLRDVNLYESQE-EAVSREEVLGRLDQ-VHGPGADIDTLCVGPRHATREEDF 83
++K L NLY +QE E ++ G VH P ADIDT+CVGP TREE F
Sbjct: 32 VKKILTAKNLYSNQEPEELASLYTFGSFRMMVHEPWADIDTMCVGPGSVTREEFF 86
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%)
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
+GP +DID LC+GP A+ + FF L QML PEV+ELH + A VP+M+FKF+G+ +
Sbjct: 139 YGPESDIDVLCIGPYIASLQHHFFVVLRQMLEGRPEVSELHSIEGAKVPLMRFKFNGILV 198
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
D Y +L + E + +L+N D + R L+G R QI++LVP ++ F+ LRC
Sbjct: 199 DFPYVQLPVINAAEAMHAFDPHVLENVDGPSWRCLSGVRANRQIIQLVPNMKKFQYLLRC 258
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 238
++ WA++RG+ ++ GF GI+ A+L A +C+ +PNA + L+S FF ++ W WP P
Sbjct: 259 LKLWARKRGLDCHLLGFFAGIHLAILAAYVCRRHPNASINTLLSLFFDIFVHWPWPLP 316
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 148/308 (48%), Gaps = 22/308 (7%)
Query: 62 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSID 121
G G+D+D + +GP +R D F Q L + V DA +P++K GVS D
Sbjct: 646 GAGSDVDAVAIGPAELSR--DAFA---QSLLQALAPGSARYVADAAIPLVKLTLGGVSFD 700
Query: 122 LLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT----DQILRLVPKIQNFRTT 177
L YA V PED + D +R++ G T D + R + + FRT
Sbjct: 701 LAYAGRPEGVPPEDPLTLLGLHGEQLDPAGLRAVLGLADTLGLMDAVARDAARTERFRTL 760
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNAVPS--MLVSRFFRVYTQWR 234
LR ++ WA+ RG+YS+ G+LGG++W LL A C + P+A+ S L+S FF + W
Sbjct: 761 LRAVKAWARARGIYSHALGYLGGLSWTLLAAWACTRATPDAMRSDAALLSHFFGTFAAWP 820
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
WP PV L R P+ K L+P+I PA P N++ NVS ST R++ +E
Sbjct: 821 WPQPVTLTPETA----------RYRPEGKRDLLPVIAPALPARNTARNVSRSTYRVIREE 870
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
R E+ + A W LF+P + E LR+ + A A+D GW+ +
Sbjct: 871 LLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDAPTAEDREVVAGWILGHV 930
Query: 355 RQLTLKIE 362
L ++E
Sbjct: 931 TALVYRLE 938
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 131/274 (47%), Gaps = 72/274 (26%)
Query: 113 FKFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVP 169
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 170 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 229
+ FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPACCSRASSAA 120
Query: 230 YTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 287
P V+L AIE +G LGL RR+
Sbjct: 121 LRGGSGPARVMLRAIEHDDGELGL-----RRH---------------------------- 147
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 347
LR+ ++ G ++C+ + K A W
Sbjct: 148 LRVTTEQLAVGDDVCQEIVKAGA----------------------------------MWV 173
Query: 348 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
GWVESRLRQL+ ++E T +L CH HP ++ +
Sbjct: 174 GWVESRLRQLSARVEADTSGVLLCHLHPQAYATE 207
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 183/388 (47%), Gaps = 63/388 (16%)
Query: 34 YLRDVNLYESQEEAVSREEVLGRLDQV--------------------------------- 60
YL N+ E++EE + R+ V+ L +
Sbjct: 16 YLERYNIIETEEEKIKRKNVIDLLQHILVNFQRAVTKDLDWKRGDIECFLSPFGSYALGG 75
Query: 61 HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSI 120
+ ADID + V P R+ FF Q+L + V+ + + A+VP++K +SI
Sbjct: 76 YIRDADIDLVLVCPIQVLRKY-FFKFFPQLLKQQTLVSNVESIQKANVPIIKCTIDNISI 134
Query: 121 DLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT----DQILRLVPKIQNFRT 176
D+ + RL + + ++++ DS+L++ DE + S++G RV +QI R ++ F+
Sbjct: 135 DISFVRLKVERVAQNINFLDDSLLKDIDETCLASMDGPRVNQFCKNQIYR--QHVRLFQV 192
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA---VPSMLVSRFFRVYTQW 233
L+C++ WA +RG+YS G+L G +W LL+ + N +M++SRFF +++QW
Sbjct: 193 CLQCIKHWATQRGIYSKPIGYLNGSSWTLLLVKAYMSIKNKELLSVTMILSRFFSMWSQW 252
Query: 234 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH--LMPIITPAYPCMNSSYNVSTSTLRIM 291
W PV+L G G ++ N ++ +MPI++P +P N + V+ ST RIM
Sbjct: 253 PWQMPVMLTDYIPGINGTKI---EYNSLAEFDNAVMPIVSPCHPVCNVAPYVTKSTRRIM 309
Query: 292 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 351
EF+RG + A + D LF P + + YK+++ I S+ W
Sbjct: 310 QIEFERGWTLLNKNAHPFAII--DKLFNPVNYTQRYKHFINIVTSSTTITSHDTW----- 362
Query: 352 SRLRQLTLKIERHTY------NMLQCHP 373
+R++ +I R+ N+LQ P
Sbjct: 363 --VRKMATQIPRYLELIESDPNILQAQP 388
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 130/230 (56%), Gaps = 21/230 (9%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY 124
DID +C P+ RE F +L+++ + EL + +A++P++ F ++ ID+ +
Sbjct: 21 GDIDMVCASPQFIKRETHFHEDLYKIFKANKNIKELKNIIEANIPIISFIYNDQDIDISF 80
Query: 125 ARLSLWVIPEDLDIS-QDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 183
A+ L ++PE+++ + +L++ E+ V SLNG R I+ V + F+ TL+ ++
Sbjct: 81 AQFKLNILPENIEGEIPEELLEDMTEKDVDSLNGRRCNQSIINSVKDQEKFKNTLKFIKL 140
Query: 184 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA 243
WAK +GVY+N+ GFLGGI+WA+LVA+ICQ++PN + L++ FF YT W +
Sbjct: 141 WAKSKGVYNNMLGFLGGISWAILVAKICQMFPNYEVNQLINEFFYYYTHWDF-------- 192
Query: 244 IEEGSLGLQVWDPRRNPKDKYH---------LMPIITPAYPCMNSSYNVS 284
+ +++ + N K K++ M ++T +P NS+ ++S
Sbjct: 193 ---SQIPIKIKEYYENTKHKHYNIKKRKESIFMNVMTSCFPEYNSTAHLS 239
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 177/381 (46%), Gaps = 42/381 (11%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP--DAHVPVMKFKFSGVSIDL 122
+D+D + P T + FF E ++L + PV A VPV+KF++ G ++D+
Sbjct: 83 SDLDVALICPSVLT-TDIFFDEFPRLL-----YNSVGPVSVVAARVPVVKFEYRGTAVDV 136
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCM 181
++ + L P + + DS L +T S NG R T +I R +P + F L+ +
Sbjct: 137 VFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTV 196
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN---- 237
+ WA RR VY NV + G A++VAR+CQ+ P++ PS L+ FF YTQW +
Sbjct: 197 KLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRIS 256
Query: 238 PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 293
PV L A EG GL W P ++ K L P+I+PAYP +N + +V L +
Sbjct: 257 PVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYS 315
Query: 294 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS------AENADDLRNWK 347
E R + + + + ++EP+ E Y +L + +S AE L W
Sbjct: 316 EITR----VQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWS 371
Query: 348 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------SKPLYCSYFMGLQRKQGV 399
+V SRLR L IERH Q P P K S L ++ +G++ K+G
Sbjct: 372 SYVASRLRILIYSIERHA----QARPCPRKIRPKKDNHVGGSSCFLSVNFLIGVKAKEGG 427
Query: 400 PVGEGEQFDIRLTVKEFKQAV 420
P + F EF AV
Sbjct: 428 PTPQPSLFT--EACGEFHHAV 446
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEV-TELHPVPDAHVPVMKFKFSGVSIDL 122
G+D+D + +GP +R++ L ++ T PE + V DA +P++K GVS D+
Sbjct: 647 GSDVDAVAIGPSSLSRDDFAHALLREVATSAPEAASSARFVADAAIPLVKLSLGGVSFDV 706
Query: 123 LYARLSLWVIP-----------EDLDISQ-DSILQNADEQTVRSLNGCRVTDQILRLVPK 170
YA V P LD S S+L AD Q V G TD+
Sbjct: 707 SYASRPEGVTPCEPLTLLAQHAPQLDTSGLRSVLGVADSQGVLDALG---TDEATH---- 759
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNAVPS--MLVSRFF 227
+ FR LR ++ WAK RG+YS+ G++GG++W +L A C + P+A S L++ FF
Sbjct: 760 -ERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTVLAAWACTRGAPDAAKSDAELLAHFF 818
Query: 228 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 287
+ + W WP PV L G P K LMP+I PA P N++ NVS ST
Sbjct: 819 QTFASWPWPQPVALTQETAGY----------RPDGKRDLMPVIAPAEPLRNTARNVSRST 868
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 347
R + +E R E+ + + W+ LF+P LR+ + A +
Sbjct: 869 FRTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRLSVEAPTPEAHEAAM 928
Query: 348 GWVESRLRQLTLKIE 362
GWV L L ++E
Sbjct: 929 GWVLGHLTALVYRLE 943
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 86/112 (76%)
Query: 102 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 161
PVPDA VP++K +FSG+S+DL++ARL L IP +LD+ + L+ D++ VRSLNG RVT
Sbjct: 63 PVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNNGYLRGLDDKEVRSLNGTRVT 122
Query: 162 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 213
DQIL LV + + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQL
Sbjct: 123 DQILELVAQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQL 174
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 103/175 (58%), Gaps = 1/175 (0%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V DID +C P R F EL Q+L V +L + A VP++ F++
Sbjct: 115 VSSKKGDIDMVCTCPNFIKRNPHFEEELCQILLNNENVKQLSNIRTAKVPIITFQYKEQD 174
Query: 120 IDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
ID+ +A+L L +P ++ D +LQN +E+ + SL+G R I+R VP +QNF+ T
Sbjct: 175 IDISFAQLQLPQLPPTIEEYVSDDLLQNMEERDILSLSGRRCNQAIVRSVPNLQNFQITC 234
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
R ++ WA+ +G+Y N GFLGGI+WA+LVA+ICQ++PN + L+ FF Y+ W
Sbjct: 235 RFIKLWAQSKGIYENSIGFLGGISWAILVAKICQMFPNYEANQLLDEFFYYYSNW 289
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 175/381 (45%), Gaps = 42/381 (11%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP--DAHVPVMKFKFSGVSIDL 122
+D+D + P T + FF E ++L + PV A VPV+KF++ G ++D+
Sbjct: 83 SDLDVALICPSVLT-TDIFFDEFPRLL-----YNSVGPVSVVAARVPVVKFEYRGTAVDV 136
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCM 181
++ + L P + + DS L +T S NG R T +I R +P + F L+ +
Sbjct: 137 VFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTV 196
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN---- 237
+ WA RR VY NV + G A++VAR+CQ+ P++ PS L+ FF YTQW +
Sbjct: 197 KLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRIS 256
Query: 238 PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 293
PV L A EG GL W P ++ K L P+I+PAYP +N + +V L +
Sbjct: 257 PVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYS 315
Query: 294 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS------AENADDLRNWK 347
E R I + + W EP+ E Y +L + +S AE L W
Sbjct: 316 EITRVQCILTEVRTLPLEEMW----EPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWS 371
Query: 348 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------SKPLYCSYFMGLQRKQGV 399
+V SRLR L IERH Q P P K S L ++ +G++ K+G
Sbjct: 372 SYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEGG 427
Query: 400 PVGEGEQFDIRLTVKEFKQAV 420
P + F EF AV
Sbjct: 428 PTPQPSLFT--EACGEFHHAV 446
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 177/381 (46%), Gaps = 42/381 (11%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVP--DAHVPVMKFKFSGVSIDL 122
+D+D + P T + FF E ++L + PV A VPV+KF++ G ++D+
Sbjct: 83 SDLDVALICPSVLT-TDIFFDEFPRLL-----YNSVGPVSVVAARVPVVKFEYRGTAVDV 136
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCM 181
++ + L P + + DS L +T S NG R T +I R +P + F L+ +
Sbjct: 137 VFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIKRRLPVPYDVFTAVLKTV 196
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN---- 237
+ WA RR VY NV + G A++VAR+CQ+ P++ PS L+ FF YTQW +
Sbjct: 197 KLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLRFFFLFYTQWMSRHDRIS 256
Query: 238 PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 293
PV L A EG GL W P ++ K L P+I+PAYP +N + +V L +
Sbjct: 257 PVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPYVNDASSVGRCGLEALYS 315
Query: 294 EFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS------AENADDLRNWK 347
E R + + + + ++EP+ E Y +L + +S AE L W
Sbjct: 316 EITR----VQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGVSCAGHSMAETEQALSVWS 371
Query: 348 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------SKPLYCSYFMGLQRKQGV 399
+V SRLR L IERH Q P P K S L ++ +G++ K+G
Sbjct: 372 SYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGSSCFLSVNFLIGVKAKEGG 427
Query: 400 PVGEGEQFDIRLTVKEFKQAV 420
P + F EF AV
Sbjct: 428 PTPQPSLFT--EACGEFHHAV 446
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 131/260 (50%), Gaps = 47/260 (18%)
Query: 305 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 364
+E N+A W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLK
Sbjct: 32 IELNKAQ--WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLK---- 85
Query: 365 TYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 424
RK+GV EG+QFDIR TV EF+Q ++MY
Sbjct: 86 ------------------------------RKEGVTGQEGQQFDIRETVDEFRQDINMYL 115
Query: 425 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 484
K GM I V+HV RR LP FVFP G + SRPS+ V+ A+ K
Sbjct: 116 PWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAERHVK 175
Query: 485 RKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNR 544
RK D + N K + SS+G R G +++++SS + ++ SN
Sbjct: 176 RKN-----DCEMANLKPSVSPSSSAG--RSG---VTSLASSCEGVILGRPTIGDIV-SNC 224
Query: 545 EKVENNLTDSIRGSRNSVEV 564
E V +N +S R S++V
Sbjct: 225 EDVASNSEESPLNQRTSMDV 244
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 189/383 (49%), Gaps = 31/383 (8%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
P +D+D + + P++ T + DFF ++ L P + E V +A VP++K + +S+D+
Sbjct: 91 PDSDVDVILIAPKYFTYK-DFFEGFYEELIRHPSIKETIKVENAFVPIIKTVCNDISVDI 149
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNG---CRVTDQILRLVPKIQNFRTTLR 179
+A L+ + ++L+ + + + + SLNG C + +++ P NF R
Sbjct: 150 SFAPLNNQIKIKNLNNIKKEDMDKLEPKAQLSLNGYLNCLLIRDLMKNHP---NFPYFTR 206
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
+R WA++R ++ N+ G+L GIN +++ A IC +PN SML+ FF ++ W W
Sbjct: 207 FIRNWAQKREIFGNLYGYLKGINISMMCAIICNQHPNCSLSMLIFHFFEYFSSWDWD--- 263
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+ ++ + Q+ DP M ++T +YP +NS V+TS+ + ++ E QR
Sbjct: 264 IQLNLDSNTPDFQLNDP----------MILMTQSYPQINSLRAVTTSSRKRIIKELQRAL 313
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
E + + +D+ W LF+ FF Y+ +L ID+ N+ G++ S+L +L +
Sbjct: 314 ETTK--KALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQIKDEIIGFLSSKLTRL-V 370
Query: 360 KIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQA 419
KI + + + P S K + +++GL K G+ + DI F
Sbjct: 371 KILEEIPGICEANIWPSKISYGGKII---FYIGLNTKS----GQSKTIDINHAKNNFISY 423
Query: 420 VSMYTLRKPGMQISVAHVTRRNL 442
+S TL K M I+ + ++ L
Sbjct: 424 ISSSTLGK-AMSINFKIIRKKEL 445
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 29/310 (9%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
V P +D+D +C P + + +DF + Q L + E +L V DA VP+++ K G+S
Sbjct: 729 VESPESDLDVVCQIPTYLS-GDDFLKNVQQRLKGLCESIQL--VLDAKVPLLRLKLEGIS 785
Query: 120 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK---IQNFRT 176
+DLLY +D + S + ++ ++ GC D I V + +F+
Sbjct: 786 LDLLYT---------GVDKNWASGINPKPTKSEMAIIGCWEADFIREFVQEYVPFDSFQW 836
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP--NAVPSMLVSRFFRVYTQWR 234
LR +R WAK R +Y N GFLGG++WALL A CQ + P L++ FF Q+
Sbjct: 837 LLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHTQPDKLLANFFNHLNQYN 896
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
W P+ L + +QV P+D L+PIIT PC N++ N++ ST I+ E
Sbjct: 897 WRQPIALTDAGK-QYSVQV------PRD---LLPIITSIEPCQNTARNITRSTAEILSGE 946
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
F R E+ + E ++DW +LFEP + +L + + + L G++E +
Sbjct: 947 FARATEMTQ--EIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQLEKECGYLEGYI 1004
Query: 355 RQLTLKIERH 364
L +++E H
Sbjct: 1005 ISLIIQLENH 1014
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 168/345 (48%), Gaps = 31/345 (8%)
Query: 81 EDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 140
E FF E +L P V + VP A VPV+KF +SG S+D+++ +L P +
Sbjct: 98 EVFFREFPPLL--QPVVGNVVLVP-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLD 154
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLG 199
DS L T S+NG R ++ R +P + F T L+ ++ WA RR VY N+ +
Sbjct: 155 DSFLLQVARDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPS 214
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR----WPNPVLLCAIEE--GSL-GL- 251
G+ A++VARICQ+ P + P++L+ FF YTQW +PV + E G + GL
Sbjct: 215 GVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLP 274
Query: 252 QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD 311
WDPRR+ + L+P+I PAYP +N + NV +L + E + + +E
Sbjct: 275 DSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLET---- 329
Query: 312 VDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVESRLRQLTLKIERHT 365
+ ++EP+ + Y + + ++ E ++ L W +V S+LR L +ER
Sbjct: 330 -PLEAIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER-- 386
Query: 366 YNMLQCHPHPGDFSD---KSKPLYCSYFMGLQRKQGVPVGEGEQF 407
++ P+P +D +S P + G G+ G +F
Sbjct: 387 --IVDARPYPQKLNDGPPRSAPKSGRFLKGSCFIVGIKEKVGRRF 429
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 49/345 (14%)
Query: 235 WPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 291
WP PVLL ++ + +L VWDPR N D +HLMPIITP YP N+++ V+ S+ IM
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 292 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 351
+E + G EI + E +W LFEP FF+ YK+YL + +S D W G+ E
Sbjct: 63 TEELKDGFEIVSKIY--EGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAE 120
Query: 352 SRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 409
S+LR L +ER+ + HP P G ++ C +F+GL V + D+
Sbjct: 121 SKLRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGL---TFVKIENQNFVDL 177
Query: 410 RLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 464
++ F KQA + L K GM++ + HV RR L +V P + S
Sbjct: 178 TFDIQSFTNTVHKQAYHI-NLMKDGMKVKIKHVKRRQLGLYVPPEILLQS---------- 226
Query: 465 RALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS--SSGEFREGSPIMSTI 522
++V++ +P + G K ++C+ T+ + S E EG+ + +I
Sbjct: 227 ----KRVAAAQEPTSSIGSASK------------SECNQTLHNTRSDTELVEGNWVPLSI 270
Query: 523 SSSSINLQFEHMDANEL--AGSNREKVENNLTDSIRGSRNSVEVS 565
S IN E + A + G+N + N + + R E+S
Sbjct: 271 HSFHIN---EDLVAGMIKNGGANVTRYNNTVRVCLFSHRTRPEIS 312
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 66/74 (89%)
Query: 202 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
N ALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEE LG VWDPR+NP+
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60
Query: 262 DKYHLMPIITPAYP 275
D+ H MPIITPAYP
Sbjct: 61 DRTHHMPIITPAYP 74
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 30/333 (9%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQML-TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
+D+D + P T FF E +L T + V V A VPV+KF G +DL+
Sbjct: 83 SDLDIVLFCPFKVT-AAVFFHEFPLLLQTVVGHVI----VVAARVPVVKFAHEGTLVDLV 137
Query: 124 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCMR 182
+ ++L P + DS L +T S+NG R T +I R +P + F T L+ ++
Sbjct: 138 FVSVALAAPPTTEQLLDDSFLLQVARETRHSVNGIRFTLEIKRRLPVTYDVFSTVLKVVK 197
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----P 238
WA +R VY N+ + G+ A++VAR CQ+ P + P++++ FF YTQW + P
Sbjct: 198 LWAMKRQVYGNLYTYPSGVVLAIMVARACQVMPASHPNVVLRFFFLFYTQWMSRHDRISP 257
Query: 239 VLLCAIEEGSLGL----QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
V + +G + + WDP K + L+P++ PAYP +N + V L + E
Sbjct: 258 VYITTSLQGRGRVPGMPEPWDPALE-KFSHDLLPVLNPAYPFVNDANAVGRCGLEVFYSE 316
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAEN------ADDLRNWKG 348
R H + E + W +P++ + + ++L + +S + +DL W
Sbjct: 317 VTRAHHLLSTTESFPLEDVW----KPYSITDDFSSFLLVQVSCDGNSEEGVENDLEVWSS 372
Query: 349 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 381
+V S+LR L +E ++ P+P D+
Sbjct: 373 YVASKLRILIYAVE----CIVDARPYPHKLKDR 401
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 44/347 (12%)
Query: 103 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 162
V A VP++KF ++GV +DLL+A + + P+ ++ +D L ++NG R
Sbjct: 119 VTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTIL 178
Query: 163 QILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 221
+I R +P + + LR +++WA RR VY N+ F G+ A++VAR CQL P A S+
Sbjct: 179 EIRRRLPLPLDAYACVLRAVKYWAARRQVYGNLYTFPNGVCLAIMVARACQLCPVADSSV 238
Query: 222 LVSRFFRVYTQWRW----PNPVLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIIT 271
++ FF +Y W +PV + +E +V WD + D L P++
Sbjct: 239 ILRFFFSLYVWWLQRGTRIDPVSIVPTDENVAIARVPGMPPPWDAVWDAAD---LFPVLN 295
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PA P +N+++ V S L++ + E R ++C + + + L+EP+ + ++ ++
Sbjct: 296 PARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLVP-----MPYSALWEPYNVLDEHRFFV 350
Query: 332 RIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----- 380
+ IS+E+ D + WKG+VES+LR +E + + P P D
Sbjct: 351 GVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFPCPVVDEPPRA 406
Query: 381 ---KSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 421
+ ++C ++F G++ + D+ +EF+ AV+
Sbjct: 407 VTRRGVTVHCRSRAFFFGVRNGN----KDVAHSDVESAFREFEFAVT 449
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 184/382 (48%), Gaps = 39/382 (10%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
G+DID + + A+ FF + E + ++ V A VP++KF ++GV +DLL
Sbjct: 83 GSDIDLIALC--SASVNTSFFFQTFPRSAE-GRLQDVVVVTSARVPLIKFSYNGVHVDLL 139
Query: 124 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMR 182
+A + + P+ ++ +D L ++NG R +I R +P + + LR ++
Sbjct: 140 FASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRRLPLPLDAYACVLRAVK 199
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----P 238
+WA +R VY N+ F G+ A++VAR CQL P A +++ FF +Y W + P
Sbjct: 200 YWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGVILRFFFSLYVWWLLRDTRIAP 259
Query: 239 VLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 292
V + +E + +V WD + D L P++ PA P +N+++ V S L++ +
Sbjct: 260 VSIVPTDENAAIARVPGMPPPWDAVWDAAD---LFPVLNPARPTVNAAHAVGRSGLQLFL 316
Query: 293 DEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNW 346
E R ++C + + + L+EP+ + ++ ++ + IS+E+ D + W
Sbjct: 317 KELLRAEQLCALVP-----MSYSALWEPYNILDEHRFFVGVHISSEHQSLAACEDTINAW 371
Query: 347 KGWVESRLRQLTLKI----ERHTYNMLQCHPHPGDFSDKSKPLYC---SYFMGLQRKQGV 399
KG+VES+LR + E ++ P + + ++C ++F G++
Sbjct: 372 KGYVESKLRMFVYALECVAEVRPFSRPVVDEPPRVVTRRGVKVHCRSRAFFFGVRNGN-- 429
Query: 400 PVGEGEQFDIRLTVKEFKQAVS 421
+ E D+ +EF+ AV+
Sbjct: 430 --KDVEHSDVEAAFREFEFAVT 449
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 34/315 (10%)
Query: 90 MLTEMPEVTE-----LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
++P +TE + V A VP++KF + GV +DLL+A + + P+ ++ +D L
Sbjct: 18 FFQKLPRLTEGRLQDVVVVTSARVPLIKFSYKGVHVDLLFASVDMRTAPDTSELLRDDFL 77
Query: 145 QNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 203
++NG R +I R +P + ++ LR +++WA +R VY N+ F G+
Sbjct: 78 SLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVCL 137
Query: 204 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGSLGLQV------ 253
A++VAR CQ P A +++ FF +Y W +PV + EE + ++V
Sbjct: 138 AIMVARACQFCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPPP 197
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 313
WD + D L P++ PA P +N+++ V S L++ E R ++C ++ +
Sbjct: 198 WDAVWDAAD---LFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVP-----LS 249
Query: 314 WDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYN 367
+ L++P+ + ++ ++ + IS E+ D + WKG+VES+LR L +E
Sbjct: 250 YSELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----C 305
Query: 368 MLQCHPHPGDFSDKS 382
+ + P P D+S
Sbjct: 306 VAEVRPFPRPVVDES 320
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 151/322 (46%), Gaps = 45/322 (13%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKF-SGVSIDLL 123
+D+D LC+GP + + +++ E + + PV DA VP++K F SG DLL
Sbjct: 839 SDLDVLCLGPHSLSLDAFQAAAVNEF--EAIGLRSVRPVCDALVPLVKLVFRSGAEADLL 896
Query: 124 YARLSLWVIPEDLDIS------QDSILQNADEQTVRSLNGCRVTDQILRLVPK--IQNFR 175
Y RL P D + + L+ D +L G D ++ +P+ + FR
Sbjct: 897 YVRL-----PADAHLPCTPAQIKPRSLKAMDSTAQLTLQGWLENDALVNAIPQPLLSTFR 951
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR-ICQLYPNAV----------PSM-LV 223
+ LR ++ WA RG+YSN AGFLGG +W++LVA + + P+ + P + L+
Sbjct: 952 SLLRRVKQWALARGIYSNAAGFLGGFSWSVLVAHFMVKTKPSPLGDEDQDSTGRPLLALM 1011
Query: 224 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY--HLMPIITPAYPCMNSSY 281
FF W WP P+LL +L P D +MP++TP +P NS+
Sbjct: 1012 HAFFVHVANWPWPQPILLNMPLGATL----------PADAIGESVMPVMTPTWPTRNSAR 1061
Query: 282 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD 341
VS STL +M E QRG ++ A AD + +P K L + + N
Sbjct: 1062 VVSVSTLSVMRAELQRGADLTAA-----ADCSLAAVADPLGVSTLAKGILVVQLQCLNKS 1116
Query: 342 DLRNWKGWVESRLRQLTLKIER 363
+L GW+ SRL L ++ER
Sbjct: 1117 ELERGAGWLLSRLGVLVHELER 1138
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 168/347 (48%), Gaps = 44/347 (12%)
Query: 103 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 162
V A VP++KF ++GV +DLL+A + + P+ ++ +D L ++NG R
Sbjct: 119 VTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTIL 178
Query: 163 QILRLVPKI-QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 221
+I R +P + + LR +++WA +R VY N+ F G+ A++VAR CQL P A +
Sbjct: 179 EIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGV 238
Query: 222 LVSRFFRVYTQWRWPN----PVLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIIT 271
++ FF +Y W + PV + ++E + +V WD + D L P++
Sbjct: 239 ILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVWDAAD---LFPVLN 295
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 331
PA P +N+++ V S L++ + E R ++C + + + L+ P+ + ++ ++
Sbjct: 296 PARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVP-----MSYSALWAPYNILDEHRFFV 350
Query: 332 RIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----- 380
+ IS+E+ + + WKG+VES+LR +E + + P P D
Sbjct: 351 GVHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPVVDEPPRA 406
Query: 381 ---KSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 421
+ ++C ++F G++ + D+ +EF+ AV+
Sbjct: 407 VTRRGVTVHCRSRAFFFGVRNGN----NDVAHSDVEAAFREFEFAVT 449
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 163/423 (38%), Gaps = 149/423 (35%)
Query: 25 LMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD-------------------------- 58
LMR EKY +YE QE+ R+E+L +L
Sbjct: 111 LMR----EKY----TIYEDQEQKRKRQEILAKLKDILDKWQIECAVKDRKILREDAEKRH 162
Query: 59 -----------QVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAH 107
Q H P D+D +CV P + + DFF + ++T EVT + V DA
Sbjct: 163 ASIHPFGSYELQAHFPETDMDVICVLPSYILHD-DFFNKFKNLITSYEEVTNVIDVVDAR 221
Query: 108 VPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 167
VPV+KFKF G ID+LYA + +I + I
Sbjct: 222 VPVLKFKFQGFQIDMLYACIDYKLIENNPKI----------------------------- 252
Query: 168 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 227
PK+ K +++ ++ GG+++A+LVA+ICQ + ++ +FF
Sbjct: 253 -PKM-------------IKDETIFNKLSQ--GGVSYAILVAKICQDNTDLYLCDIIYKFF 296
Query: 228 RVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 281
VY W+W +PV + + LQV D +MPI+TP NS+Y
Sbjct: 297 EVYADWKWFDPVFIRVGKKKDKTKLDLNKLQVLDAYSQD-----IMPILTPNTNPKNSAY 351
Query: 282 NVSTSTLRIMMDEFQRGHEICEAM------------------------------------ 305
V + T + EF RG + + +
Sbjct: 352 RVCSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKLTVDALQIQE 411
Query: 306 -----------EKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
+K + W LF+ F FF+ Y+++L+IDI + + W G+VES+L
Sbjct: 412 SNQESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLKWLGYVESQL 471
Query: 355 RQL 357
R+L
Sbjct: 472 RRL 474
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 130 bits (327), Expect = 3e-27, Method: Composition-based stats.
Identities = 57/83 (68%), Positives = 65/83 (78%)
Query: 197 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP 256
FLGG++WA+LVAR CQLYPNA+ S LV +FF V +W WPNPVLL EE +L L VWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 257 RRNPKDKYHLMPIITPAYPCMNS 279
R NP D+YHLMPIITPAYP NS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 114/214 (53%), Gaps = 6/214 (2%)
Query: 352 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFDIR 410
SR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QFDIR
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 411 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRALER 469
TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++ E
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 470 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF--REGSPIMSTISSSSI 527
SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTPPVC 180
Query: 528 NLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 561
NL+ + E N E E LTD R NS
Sbjct: 181 NLRRPPSEEIEADNLNTECTE--LTDLARNECNS 212
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 129 bits (324), Expect = 5e-27, Method: Composition-based stats.
Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 114 KFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVPK 170
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 197 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQ 252
F GGI WA+LVAR+CQ++PN LV RFF + ++W W NPV LC I E G + +
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 301
VW+P++ D+ HLMP+ITPA+P MNS+YNV+ +T RI+M E +R H++
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL 109
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 32/297 (10%)
Query: 118 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRT 176
+S+D+++ ++L P + DS L T S+NG R T ++ R +P F T
Sbjct: 1 MSVDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLPVPHKVFAT 60
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR-- 234
L+ ++FWA RR VY N+ + G +A++VAR+CQ+ P+ PS+L+ FF YTQW
Sbjct: 61 VLKAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSR 120
Query: 235 --WPNPVLLCAIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 288
+PV L A E G + GL + W P +N + L P+I+PAYP +N + NV L
Sbjct: 121 HDHISPVYLTATLESRGRIPGLPESWKPAKNECFR-DLFPVISPAYPYVNDASNVGRCGL 179
Query: 289 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD------D 342
+ E + + A + + + L+ P+ E + ++L +++S+ D
Sbjct: 180 ESLYSEITQAQRVISASDT----LSLEKLWRPYCIMEDFAHFLLVEVSSLGDDMADAERI 235
Query: 343 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDFSDKSKPLYCSYFM 391
L W +V S+LR L +ER + PHP G F D+ YF+
Sbjct: 236 LGRWGSYVGSKLRFLIYSVER----FVHARPHPHKLRAKMDGTFVDRKVCCSSIYFL 288
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 36/348 (10%)
Query: 60 VHGPGADIDTLCVGPRHATREEDF--FGELHQMLTEMPE---VTELHPVPDAHVPVMKFK 114
V +D+D +C+ P + T E + Q L + PE V DA PV++ +
Sbjct: 650 VASSTSDLDVVCLIPDYLTGESFLTRVADCLQGLCDSPEERLCQRSQVVLDAKYPVLRLE 709
Query: 115 FSGVSIDLLYARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP-- 169
G+S+DLLY ++++ W D+ + + +S+ GC D I+ LV
Sbjct: 710 IEGISLDLLYTQVAVSDGWETRNIRDL-------RSQIKDTKSIVGCWEADLIVDLVKQQ 762
Query: 170 -KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY--PNAVPSMLVSRF 226
+++ F+ L+ +R WAK RG+Y N GFLGG +W+LL A C Y P+ + L++ F
Sbjct: 763 LRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTCIDYRGPDKSLAALLANF 822
Query: 227 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 286
F++ +Q W + L LG Q + P+D L+PII+ PC N++ N++ S
Sbjct: 823 FQILSQHNWRQTIAL-----TELGKQ--HQVKLPQD---LLPIISSIEPCKNTARNITRS 872
Query: 287 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNW 346
T +I+ DEF R EI + + W +L+EP L I+I + +
Sbjct: 873 TAKILRDEFARAAEISTNILVGKD--AWTSLYEPIDLTIGTNALLSIEILDTDEQCRQKC 930
Query: 347 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ 394
+ES + LT+++E+ + P+P + +SK ++ + F+ L+
Sbjct: 931 SDLLESTIIGLTIQLEQLDVFV---RPNPQISTSESKSIF-TLFLQLR 974
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 41/286 (14%)
Query: 120 IDLLYARLSLWVIPEDLDISQD--SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 177
+DL+ +RL+ IP+ LD Q + +N D +VRSL+G + ++ +++ +F
Sbjct: 51 VDLVISRLATSYIPQQLDFEQTPGDLYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPL 110
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ-LYPNAVPSM--------------- 221
LR +R W + R + S V GF I W ++V IC+ L N+ S
Sbjct: 111 LRVIRTWVRARAIGSYVYGFPASIAWTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEP 170
Query: 222 --------------------LVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNP 260
LV FF + W WP+PV + +I+ S L + WDP+RN
Sbjct: 171 AAERNSGEESLASRSHALFCLVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNA 230
Query: 261 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 320
+D LMPI+TP +P N+++ V +T +I+ DE R +I + + W+ LFE
Sbjct: 231 QDGRDLMPILTPVFPNKNAAFTVRQATRKIVTDELIRARDIVSDVLRGSG--TWEKLFER 288
Query: 321 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY 366
+ + ++++L + + + ++L G ++SRLR L +E Y
Sbjct: 289 YDLRDDHRHFLLLTLQTTSKEELVVVGGLIDSRLRDLAQALEDEQY 334
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 33/332 (9%)
Query: 106 AHVPVMKFKFSGVSIDLLYARLSLW--VIPEDLDISQDSILQNADEQTVRSLNGCRVTD- 162
+ VP+M + GVS+D+ +A L + +PE LDI + IL+N E T+ SL GCR T+
Sbjct: 6 SFVPIMTMEIDGVSVDISFASLPSYPFKLPEFLDILSNDILRNVSEHTLHSLTGCRCTEF 65
Query: 163 --QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL------- 213
Q LR K+ FR T +RF+ K+ +Y NV G+LGG+N +L+A L
Sbjct: 66 VIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLASTNLLENDFLTN 125
Query: 214 ---YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
+ + V L S + Q +P E + W + + + + ++
Sbjct: 126 TFHFFHFVADHLGSEIIAMTPQLSFP---------ELGFDEENWSDKPSNFSNHDSLVLL 176
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 330
TP YP MN++ +S S+L+ + + +R +E ++ E+ + + EP+ FFE + Y
Sbjct: 177 TPTYPRMNTARTISRSSLQFIRSQARRVYEKIKSYVDGESTL--LQMVEPYQFFEGFPIY 234
Query: 331 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 390
+ +SA + ++W G VES++R L + N+ +P+P KS ++
Sbjct: 235 FEVLVSASANSEFKDWLGLVESKIRYLVFFLSLRIENV-ALNPNP--IVSKSNSNAACFY 291
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 422
+GL V + + D+ V +F V +
Sbjct: 292 IGLT----VDLTKATTLDLSQCVNDFIDIVRL 319
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 125 bits (314), Expect = 7e-26, Method: Composition-based stats.
Identities = 63/110 (57%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 114 KFSGVSIDLLYARLSLWVIPEDLDISQD--SILQNADE-QTVRSLNGCRVTDQILRLVPK 170
+F GV +DL+YA + L P Q S+L+ D+ T SLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQRDRSVLRGLDDLATAHSLNGIRVADEILRLVPE 61
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
FRT LRC+ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 138/321 (42%), Gaps = 72/321 (22%)
Query: 24 DLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----------------------- 60
D R+ L ++L+D S E+ RE+V+ L ++
Sbjct: 84 DQRRSSSLVQFLKDEGAVPSPEDEKKREKVIRELKKIVMHWANAVAYEQSVPQGLATATV 143
Query: 61 ----------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPV 110
HGP +DID LCVGP AT + FF L Q+L PEV+EL + A VP+
Sbjct: 144 LTYGSYTLGAHGPESDIDVLCVGPCIATLQYHFFVVLRQLLEGRPEVSELQTIEKAKVPL 203
Query: 111 MKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPK 170
M+F+F+G+++D YA+L ++
Sbjct: 204 MRFRFTGIAVDFTYAQLP--------------------------------------VIDA 225
Query: 171 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVY 230
++ F+ LRC++ WA++RG++ + GF GI+ A+L A +C+ +P+A + L + FF+ +
Sbjct: 226 LKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAYVCRKFPDASVNGLFAVFFQTF 285
Query: 231 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 290
W W P L + + + + P ++ + + P + + S R+
Sbjct: 286 AHWPWQVPDSLRHDFQWTWLFEPF-PYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRL 344
Query: 291 MMDEFQRGHEICEAMEKNEAD 311
++ + +R C+ E D
Sbjct: 345 LILKLERAGIECDPCPSEEVD 365
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 311 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 370
D W LFEPF + + Y+ +LRI + A +LR+W GWV+SR R L LK+ER ++
Sbjct: 299 DFQWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLERAG---IE 355
Query: 371 CHPHPGDFSDKS 382
C P P + D +
Sbjct: 356 CDPCPSEEVDHT 367
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 100/216 (46%), Gaps = 56/216 (25%)
Query: 153 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 212
+ LNG RV +Q+L VP F +LR ++ WAK GVYSN GF GGI WA+LVAR CQ
Sbjct: 70 KILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVARTCQ 127
Query: 213 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 272
LYPNA PS ++ + F V++ W WP+PV+L
Sbjct: 128 LYPNAAPSKIIQKVFLVFSTWNWPSPVIL------------------------------K 157
Query: 273 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 332
+ C++S +TL I+ E + +IC ++K A W+ L F F
Sbjct: 158 HFDCVDSK-----TTLHIIQKEMKAALKICNRIQKGNA--TWNDLANWFRFSRGIG---- 206
Query: 333 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNM 368
I ENA +L LTLKIE NM
Sbjct: 207 -KIFMENAKNL------------DLTLKIEGFKRNM 229
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD 58
LG+ +PISL P +D+ + L +YL+ +ES+EEA R L +L+
Sbjct: 2 LGVPQPISLDTPNKNDISLSNSLNEYLKQSKCFESKEEASQRVNTLSKLN 51
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 189 GVYSNVAGFLGGINWALLVARICQ---LYPNAVPSM-----------LVSRFFRVYTQWR 234
G+YSN GFLGG +W++LVA +C+ LY + + L++ FF VY W
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
W PV AI GS R P K MPI+TP P NS+ NV+ STL M E
Sbjct: 753 WQQPV---AITPGS-------ARYKPGHKSDKMPIVTPTPPFNNSARNVARSTLTEMQQE 802
Query: 295 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 354
F R +I +A + N ++ + L +P FF+ Y YL +++ + ++D++ GW+ESRL
Sbjct: 803 FFRAFDITQAPQWN-SEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRL 861
Query: 355 RQLTLKIERHTYNMLQCHPHPGDF 378
L +E++ + P PG F
Sbjct: 862 IALIFDLEKNPQTYAR--PFPGTF 883
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/76 (61%), Positives = 59/76 (77%)
Query: 158 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 217
CRV D+ILRLVP I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 218 VPSMLVSRFFRVYTQW 233
P+ LV +FF +YT+W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 113/194 (58%), Gaps = 13/194 (6%)
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPP 58
Query: 322 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDF 378
FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 NFFQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNK 118
Query: 379 SDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQI 432
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I
Sbjct: 119 EHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKI 176
Query: 433 SVAHVTRRNLPNFV 446
HV ++ L +++
Sbjct: 177 EATHVKKKQLHHYL 190
>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
Length = 238
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 109/214 (50%), Gaps = 39/214 (18%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL + L+ ++E +EE R +LG+L+
Sbjct: 21 GITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREIS 80
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 81 ESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DFFTSFYDKLKL 139
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 153
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +R
Sbjct: 140 QEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIR 199
Query: 154 SLNGCR--VTDQILRLVPKIQNFRTTLRCMRFWA 185
SLNG R + +L+ + I F T+ F A
Sbjct: 200 SLNGMRKPTSFCVLQFLSDISCFYTSFVLKLFIA 233
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 190/411 (46%), Gaps = 47/411 (11%)
Query: 17 LAGPTDDDLMRTRKLEKYLRD-VNLYESQEEAVSREEVLGRLDQVHGPG-------ADID 68
LA P+++++ + ++ + +++ VN ++ A +R ++L + V G +D+D
Sbjct: 597 LAFPSNEEITQRQEAFELIKELVNRRDANLPAGTRLDLLFEVVAVGSYGFGVWNSSSDMD 656
Query: 69 TLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMKFKFSGVSIDLLYAR 126
L +G FF + L +V L V A +++ + GV +DL Y
Sbjct: 657 ILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQYCA 713
Query: 127 LSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 184
+ V P+ L++ D + Q++ LN R + R +P + +FR R ++ W
Sbjct: 714 ATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIW 773
Query: 185 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVL 240
A+RRG+YS+ G+LGGI+ LL+ARIC L ++ +++ FF+ Y Q+ W V+
Sbjct: 774 AQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQVV 833
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
S + + P+R P + I++ P +N + S + R ++ EFQR +
Sbjct: 834 YDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVARAASIPSTRTLVQEFQRADK 886
Query: 301 ICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRIDIS--AENADDLRNWKGWVE 351
+ ++ DV W+ L E T F ++Y++Y ++++ A R GW+E
Sbjct: 887 LL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLVGWLE 941
Query: 352 SRLRQLTLKIERHTYNMLQCHPHPGDFSD------KSKPLYCSYFMGLQRK 396
R L + I R + + P F+D +K Y +GL R+
Sbjct: 942 WRCVSLLVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQGCYLIGLTRE 991
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 190/411 (46%), Gaps = 47/411 (11%)
Query: 17 LAGPTDDDLMRTRKLEKYLRD-VNLYESQEEAVSREEVLGRLDQVHGPG-------ADID 68
LA P+++++ + ++ + +++ VN ++ A +R ++L + V G +D+D
Sbjct: 597 LAFPSNEEITQRQEAFELIKELVNRRDANLPAGTRLDLLFEVVPVGSYGFGVWNSSSDMD 656
Query: 69 TLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMKFKFSGVSIDLLYAR 126
L +G FF + L +V L V A +++ + GV +DL Y
Sbjct: 657 ILVIG---QVSPRTFFALMIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQYCA 713
Query: 127 LSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 184
+ V P+ L++ D + Q++ LN R + R +P + +FR R ++ W
Sbjct: 714 ATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIW 773
Query: 185 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVL 240
A+RRG+YS+ G+LGGI+ LL+ARIC L ++ +++ FF+ Y Q+ W V+
Sbjct: 774 AQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQVV 833
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
S + + P+R P + I++ P +N + S + R ++ EFQR +
Sbjct: 834 YDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVARAASIPSTRTLVQEFQRADK 886
Query: 301 ICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRIDIS--AENADDLRNWKGWVE 351
+ ++ DV W+ L E T F ++Y++Y ++++ A R GW+E
Sbjct: 887 LL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLVGWLE 941
Query: 352 SRLRQLTLKIERHTYNMLQCHPHPGDFSD------KSKPLYCSYFMGLQRK 396
R L + I R + + P F+D +K Y +GL R+
Sbjct: 942 WRCVSLLVDIHRK-FPDIHARIWPARFTDMEEVGETTKEYQGCYLIGLTRE 991
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 19/196 (9%)
Query: 259 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 318
NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LF
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLF 59
Query: 319 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHP 373
E FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P
Sbjct: 60 EAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP 119
Query: 374 HPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLR 426
P + DK + + +GL K+ E D+ ++ F +QA++ M+ +
Sbjct: 120 APKENPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV- 176
Query: 427 KPGMQISVAHVTRRNL 442
M+I+ HV R+ L
Sbjct: 177 --DMKIAAMHVKRKQL 190
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 312
VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA-- 58
Query: 313 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
+W LFE FF+ YK+Y+ + SA W G VES++R L +E
Sbjct: 59 EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 28/317 (8%)
Query: 54 LGRLDQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKF 113
L ++ Q H +DID LC P + + FF +L L+++ + +H V DA V +KF
Sbjct: 632 LLKIAQAH---SDIDVLCPLPP-SLALDPFFDQLQTALSQVAQ--GVHLVTDARVTTLKF 685
Query: 114 KFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN 173
GV+ DLL + +P L + Q D + +++ G +IL L K+
Sbjct: 686 NLQGVNFDLLAVHHPSFPVP--LHQVKPEAFQQFDPLSWQNMVGYLEGQKILALGNKVGQ 743
Query: 174 --FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNAVPSM--LVSRFFR 228
FR +R +R WA R+ + NV GF G I+WA+L A C P++ L+ FF
Sbjct: 744 TLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAAWSCAHCQTKHTPTLEHLLQNFFD 803
Query: 229 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 288
+ Q W P+ ++EG+ V R +D MP+++ YP N++ N++ ST
Sbjct: 804 LLAQHSWVIPI---GLQEGTSSYIV----RKHRD---WMPVVSAFYPYKNTTRNLTQSTA 853
Query: 289 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 348
+++ E Q+ + + ++W T F + Y L +++SA N +L +G
Sbjct: 854 KVIQGEIQKARLLLQ-----NTSINWLTFFAATDVQKEYTQLLILELSASNEQNLELAQG 908
Query: 349 WVESRLRQLTLKIERHT 365
+ L + L +E+
Sbjct: 909 KLLGSLLGVILALEQQV 925
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 107 bits (266), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 53/65 (81%)
Query: 156 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 215
+G RV D+ILRLVP FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 216 NAVPS 220
N P+
Sbjct: 69 NTSPA 73
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 312
VWDPR N D++HLMPIITPA+P NS++NVS STL I+ +E + IC+ + A
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSA-- 213
Query: 313 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 372
W+ LFE FF Y++++ + ++ E+ + G+ ESR+RQL +ER+ L H
Sbjct: 214 TWNNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AH 266
Query: 373 PHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 432
+P F KS +F+GL+ + V + D+ ++ FK+ V + G+QI
Sbjct: 267 INPKKF--KSVQNASVWFLGLELIENV-----KNLDLTAEIEGFKKNVEK---QANGIQI 316
Query: 433 SV--AHVTRRNLPNFVFPGGVRPSR 455
++ +V R L ++ ++ R
Sbjct: 317 TLDATYVKRSGLIKWIPVADLKKGR 341
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 36/137 (26%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
G+++PIS PT D T L + L YES+EE+++R +VL +L+
Sbjct: 11 GVSQPISTNAPTKSDFKLTDSLNESLHQFECYESKEESMTRIKVLSKLNALVKQWIKTLT 70
Query: 60 -------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM 94
VH GADID L + PRH R DFF +ML E
Sbjct: 71 AQRIPNGHELNAGGKLISFGSYRLGVHNSGADIDALVIAPRHVAR-LDFFTSFKKMLLEN 129
Query: 95 PEVTELHPVPDAHVPVM 111
V L V +A VP+M
Sbjct: 130 SSVKNLACVENAFVPIM 146
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 157/364 (43%), Gaps = 70/364 (19%)
Query: 55 GRLDQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFK 114
GR+ V +D+D +C+ P T E F ++ L + + ++L V A VPV++ +
Sbjct: 638 GRIG-VQSTHSDLDLICIIPVPLT-GETFLKQVQNRLAGLCDRSQL--VKSARVPVLRME 693
Query: 115 FSGVSIDLLYARLSLWVIPEDLDISQDSILQNA--------DEQTVRSLNGCRVTDQILR 166
GV++DLL A + Q I++ D + + G D I+
Sbjct: 694 IEGVAVDLLSAT----------TMGQSQIIEPLSEAARPFFDAASWSAAVGILEADLIVD 743
Query: 167 LV-PKIQ--NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA--------------R 209
+V P + F LR +R WAK R ++ N GFLG +WALL A R
Sbjct: 744 IVSPHLSWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDITPDSPR 803
Query: 210 ICQ-----------------LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ 252
+ L + + +L++ FF++ +Q W P+ A+ EG G Q
Sbjct: 804 LLHSQENDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPI---ALTEG--GKQ 858
Query: 253 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 312
P R ++ + P+IT PC NS+ NV+ ST I+ E RG EI E E +
Sbjct: 859 Y--PVRKSREWF---PVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAE--EVLAGNT 911
Query: 313 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 372
W TLFE E +L + +S+ +L GW+E L + +E+ +
Sbjct: 912 AWTTLFESADLPEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQKLN--IHVR 969
Query: 373 PHPG 376
P PG
Sbjct: 970 PRPG 973
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 13/189 (6%)
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQK 58
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK 383
Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 YRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKD 118
Query: 384 PLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHV 437
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I HV
Sbjct: 119 NNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHV 176
Query: 438 TRRNLPNFV 446
++ L +++
Sbjct: 177 KKKQLHHYL 185
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 28/193 (14%)
Query: 196 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSL 249
GF GI+ A+L A +C+ +P+A S L + FF+ + W W PV L C EG
Sbjct: 12 GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-- 69
Query: 250 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 309
LMPI+ P P + V+ +L+ + +E RG+ + +
Sbjct: 70 ---------------RLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVL--TRDPLR 112
Query: 310 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 369
D W LFEPF + + Y+ +LRI + A +L +W GWV+SR R L LK+ER +
Sbjct: 113 HDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGI 169
Query: 370 QCHPHPGDFSDKS 382
+C P P + D +
Sbjct: 170 ECDPCPSEEVDHT 182
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 31/205 (15%)
Query: 235 WPNPVLLCAIEEG------SLGLQVWDPR------RNPKDKYHLMPIITPAYPCMNSSYN 282
WP+PV+L E SL VWDPR +P ++HLMPI+TPA+P NS++N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 283 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR-IDISAENAD 341
V+ S+L+I+M+E + G + K +A W LFE FF YK++L + +SA D
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKA--GWSALFEEVNFFSRYKHFLALLCLSATEQD 154
Query: 342 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS----------YFM 391
+L W G VES++R L +ER ++ CH H + ++ P +F+
Sbjct: 155 ELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPFPVQVSLQNPRCRLWFI 212
Query: 392 GLQRKQGVPVGEGEQFDIRLTVKEF 416
GL + V + DI+ V+ F
Sbjct: 213 GLDLNKTV----SRKIDIQHEVQSF 233
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 47/343 (13%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH---PVPDAHVPVMKFKFS 116
V P +DID L +G + + F + Q L PE E+H V +++ +
Sbjct: 654 VWDPSSDIDCLVIG---SISPKTFMALMVQKL-RRPEWQEIHILRKVKATSGTMLEIQAG 709
Query: 117 GVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 172
GV DL Y A S+ W P+ L + + Q++ LN R + + R +P +
Sbjct: 710 GVRFDLQYCAATSVTDSW--PKALTLPSSDPTFDLPMQSLLKLNSHRDLEYLQRTIPDLA 767
Query: 173 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV----PSMLVSRFFR 228
FR R ++ WAK RG+YS+ G+LGGI+ LL+AR+C+L S ++S FF
Sbjct: 768 TFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLLARVCKLSFREAGATSVSDIISDFFF 827
Query: 229 VYTQWRWPNPVLL-CAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPCMNSSYN 282
Y + W N ++ G+ KYH M I++ P +N ++
Sbjct: 828 YYENFDWKNDMVYETTFYTGT-------------PKYHRLSREPMVILSIHPPKVNVAHA 874
Query: 283 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP---FTFFEAYKNYLRIDIS--A 337
+ S++ + EF+R ++ +E W + +P F EAY +Y+++D+ A
Sbjct: 875 STVSSVHTLEQEFKRAAQLI-----SEVGATWKNIADPSGVVQFLEAYSSYIKVDVHYWA 929
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
+ A R GW+E R L + I R + + P F+D
Sbjct: 930 KAAAKGRALFGWLEFRCVSLLVNINR-GFPDIHARIWPARFTD 971
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 172/362 (47%), Gaps = 40/362 (11%)
Query: 17 LAGPTDDDLMRTRKLEKYLRD-VNLYESQEEAVSREEVLGRLDQVHGPG-------ADID 68
LA P+++++ + ++ + +++ VN ++ A +R ++L + V G +D+D
Sbjct: 597 LAFPSNEEITQRQEAFELIKELVNRRDANLPAGTRLDLLFEVVPVGSYGFGVWNSSSDMD 656
Query: 69 TLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMKFKFSGVSIDLLYAR 126
L +G FF + L +V L V A +++ + GV +DL Y
Sbjct: 657 ILVIG---QVSPRTFFALIIAKLRRATDSDVVLLRKVKAASGIMLELEVRGVRVDLQYCA 713
Query: 127 LSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFW 184
+ V P+ L++ D + Q++ LN R + R +P + +FR R ++ W
Sbjct: 714 ATRVVESWPQALELPADHSTFDLPMQSLLKLNSLRDMHYLQRTIPDLASFRLAYRFIKIW 773
Query: 185 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVL 240
A+RRG+YS+ G+LGGI+ LL+ARIC L ++ +++ FF+ Y Q+ W V+
Sbjct: 774 AQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAADIITTFFKHYAQFNWEKQVV 833
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
S + + P+R P + I++ P +N + S + R ++ EFQR +
Sbjct: 834 YDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVARAASIPSTRTLVQEFQRADK 886
Query: 301 ICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRIDIS--AENADDLRNWKGWVE 351
+ ++ DV W+ L E T F ++Y++Y ++++ A R GW+E
Sbjct: 887 LL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVNVQYWGGAATKGRMLVGWLE 941
Query: 352 SR 353
R
Sbjct: 942 WR 943
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 172/425 (40%), Gaps = 93/425 (21%)
Query: 41 YESQEEAVSREEVL----GRLDQVHGPGADIDTLCVGPRHATREEDFFGELHQMLTEM-- 94
+E E+ R+ +L L ++ P +DIDT+ + + + + ++LTEM
Sbjct: 85 FEETTESTDRDPILLVFGSTLMEITTPTSDIDTVVL--VSDVKRSAYMKRVQKVLTEMEP 142
Query: 95 --PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA----- 147
+ + D+ VP +K + G +D+ +A L V+ E D Q + +
Sbjct: 143 FRSYCDDFSLLADSLVPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQAEVHRVCTAGLL 202
Query: 148 ---------------DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYS 192
D+ T+RSLNG RV +L+ P + +R LR ++ WAK RG+YS
Sbjct: 203 EPEGSAAADWSNSLVDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYS 262
Query: 193 NVAGFLGGINWALLVARICQ---------LYPNAVPSMLVSRF-FRVYTQWRWPNPV--- 239
NV G+ GG+ WA+LV+++ Q +AV +L+ F F W NPV
Sbjct: 263 NVMGYFGGVTWAILVSKVMQDNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTAN 322
Query: 240 ---LLCAIEEGSLGLQVWDPR-------------------RNPKD----------KYHLM 267
L + GS+ + R R+P + + M
Sbjct: 323 DEILNGFVSAGSVEMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCM 382
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFFE 325
++TP P NSS+N +M+ EF+R + A+ + F
Sbjct: 383 VVLTPVLPTQNSSFNALDFNRYVMVQEFKRAAHMLSLFALSPQSCPFRLGAVCARVHPFR 442
Query: 326 AYKN--YLRIDISAENADDLRN---------WKGWVESRLRQLTLKIERHTYN----MLQ 370
YK ++ ++I EN L N VES++R T K+ ++ L+
Sbjct: 443 LYKRLLFVEVEIRPENQRTLSNDDVHLLQKRIAAMVESKVRIFT-KLSAAAFHEEGTYLR 501
Query: 371 CHPHP 375
+PHP
Sbjct: 502 LYPHP 506
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 28/271 (10%)
Query: 148 DEQTVRSLNGCRVTDQILRLV------PKIQN--FRTTLRCMRFWAKRRGVYSNVAGFLG 199
D++ ++S+NG R IL V P+I F+ L+ ++ WA+ G+Y N GFL
Sbjct: 2 DQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFLS 61
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVY-TQWRWPNPVLLCAIEEGSLGLQVWDPRR 258
GI+ A+++A+I QL+PN + ++ +FF+ + ++W W + + +Q+ +R
Sbjct: 62 GISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQMQSQQR 121
Query: 259 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 318
M IITPAYP N++ V I++ + ++ + N+ ++ W+ +
Sbjct: 122 ------KCMHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQ----NQKNIVWEKIV 171
Query: 319 EPFTFFEAYKNYLRIDISAENADDLRNW---KGWVESRLRQLTLKIERHTYN--MLQCHP 373
E F YK ++ ID+ ++ + K + RL L +++ Y+ ++ P
Sbjct: 172 EKENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIEVRP 231
Query: 374 HPGDFSDKSKP--LYCSYFM-GLQRKQGVPV 401
P F DK P YC+ F+ GL+ K PV
Sbjct: 232 WPI-FFDKKDPDYPYCAAFLIGLKNKMHQPV 261
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 81 EDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ 140
E FF E +L P V + VP A VPV+KF +SG S+D+++ +L P +
Sbjct: 98 EVFFREFPPLL--QPVVGNVVLVP-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLD 154
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLG 199
DS L T S+NG R ++ R +P + F T L+ ++ WA RR VY N+ +
Sbjct: 155 DSFLLQVARDTRHSVNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPS 214
Query: 200 GINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 233
G+ A++VARICQ+ P + P++L+ FF YTQW
Sbjct: 215 GVVLAIMVARICQVMPASHPNVLLRFFFLFYTQW 248
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 150/347 (43%), Gaps = 57/347 (16%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMP--EVTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LC+GP A + FF + + L ++P ++ + V +++ + G+ DL
Sbjct: 679 SDLDVLCIGPFSA---QTFFALVTRALRKVPPQDIKIIRRVRANTGTMLELEIHGIKTDL 735
Query: 123 LYARLSLWVIPED----LDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
+ I E L + + + + Q++ L R D + R VP I+ FR
Sbjct: 736 QCCPAT--TIAERWGDVLRTAPNDPVWDLSPQSLLKLKAVRDMDYLRRTVPNIRVFRAAN 793
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN--------AVPSMLVSRFFRVY 230
R +R WAK RGVY++ GFL GI A+LVAR+ +L N V LV+ FF Y
Sbjct: 794 RAIRAWAKARGVYTSRFGFLSGIQIAILVARVAKLLANNPDVKTPITVEDFLVT-FFTHY 852
Query: 231 TQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLM-PIITPAY--PCMNSSYNV 283
+ W + +DP R P ++ PI Y P +N++
Sbjct: 853 ASFPWSTHL-------------AFDPFFHRNRLPYNRVPFREPIAILGYFPPALNTAAAA 899
Query: 284 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----------FFEAYKNYLRI 333
S S+ R + DEF+R EA+ DW F T F AYK Y+R+
Sbjct: 900 SPSSARTLADEFRRA---GEALVSGNV-TDW-AFFLSGTGSNGTTGVQEFLSAYKTYIRL 954
Query: 334 DISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
D S R + GW+ESRL L + I R T +L P F
Sbjct: 955 DASYWGLSRSRGSQFLGWLESRLVSLLVDISRRTNGVLHARIWPARF 1001
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 91/196 (46%), Gaps = 50/196 (25%)
Query: 234 RWPNPVLLCAIEE--------GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 285
+WP P+LL IEE + +VW+PR D+ HLMPIITP+YP M S++NV+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 286 STLRIMMDEFQRGH------------------EICEAMEKNEADVDWDTLFEPFTFFEAY 327
ST+ +M DEF RG +I E + A +W LF FF+ Y
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRA--EWSELFAKHDFFQKY 192
Query: 328 KNYLRIDISAENADDLRNW----------------KGWVESRLRQLTLKIERHTYNMLQC 371
+ YL+I S+ A+D W G VESRLRQL +K+E +
Sbjct: 193 RYYLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLE-FVDQLEVA 251
Query: 372 HPHPGDFSDKSKPLYC 387
HP F K YC
Sbjct: 252 HPFIKGFEQKH---YC 264
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 119/302 (39%), Gaps = 74/302 (24%)
Query: 214 YPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDK 263
+PN + +V RFFR+Y W PNP + L L + WDPR + D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64
Query: 264 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEADVDW 314
L P++TPA P N+ +NV+ + LR + EF RGHEIC EA + W
Sbjct: 65 MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124
Query: 315 DTLFEPFTFFEAYKNYLRIDISAENADDLRN------------WKGWVESR------LRQ 356
L EP FF +K YL + +S +A+ + W G ESR +R
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALENVRH 184
Query: 357 LTLKIERHTYNM--------------------------LQCHPHPGDFSDKSKP--LYCS 388
+ +++ Y + H G D S P C
Sbjct: 185 VRIRLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAVDDSSAPKIFSCH 244
Query: 389 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPN 444
YF+G+ P G + D+ +++ F V K G+ I+V +++ +P
Sbjct: 245 YFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK--IPA 299
Query: 445 FV 446
FV
Sbjct: 300 FV 301
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 5/80 (6%)
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 207
D + +RSLNGCRVTD+IL LVP NFR+TLR ++ WAKRRG+YS LGG +WA+LV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVP--NNFRSTLRAIKLWAKRRGIYSTFR-ILGG-SWAMLV 56
Query: 208 ARICQLYPNAVPSMLVSRFF 227
AR CQLY NA+ S LV +F+
Sbjct: 57 ARTCQLY-NAIASTLVHKFY 75
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 136/324 (41%), Gaps = 43/324 (13%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMP-EVTELHPVPDAHVPVM-KFKFSGVSIDL 122
+DID LC+GP + FF Q + + + +L AH M + + GV +DL
Sbjct: 700 SDIDVLCIGPFSSN---TFFALASQRVRKAAAQGIKLLRRVRAHTGTMLELEVHGVKVDL 756
Query: 123 LYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y + W P+ L I + + QT+ L R D + R VP + FR
Sbjct: 757 QYCPAASVAERW--PDVLRIPSSDPVWSLSAQTLSKLKAIRDADYLRRSVPDLTTFRLAH 814
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN-----AVPSMLVSRFFRVYTQW 233
R ++ WAK RG+Y+ GFL GI ++L+AR+ +L P L+ FF Y +
Sbjct: 815 RFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGAPPTPEALIVTFFHHYAAF 874
Query: 234 RWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIITPAY--PCMNSSYNVSTST 287
W + +DP RR P + P+ Y P +N++ S +
Sbjct: 875 DWSAQL-------------AFDPLFHRRRLPYSRTAREPLAILGYFPPALNTALAASVPS 921
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----FFEAYKNYLRIDISAENADDL 343
+ + EF+R + + A W +L F AYK+Y+++D+
Sbjct: 922 TKTLAAEFRRASDALRSATDPPA--SWSSLLSVSAGRDEFLAAYKSYVKLDVQYWGLSLS 979
Query: 344 R--NWKGWVESRLRQLTLKIERHT 365
R + GW+ESR L + + R
Sbjct: 980 RGAQFLGWLESRCVMLLVDLHRRA 1003
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 23/197 (11%)
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 327 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDK 381
YK+Y+ + SA W G VES++R L +E++ + L Q P P + DK
Sbjct: 59 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 118
Query: 382 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISV 434
+ + +GL K+ E D+ ++ F +QA++ M+ + M+I+
Sbjct: 119 EE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAA 173
Query: 435 AHVTRRN----LPNFVF 447
HV R+ LPN V
Sbjct: 174 MHVKRKQLHQLLPNHVL 190
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 141 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
+S L N T++ L R +L +P + +R R ++ WA+++GVYS+ GF GG
Sbjct: 728 NSPLWNLTVPTLKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGG 787
Query: 201 INWALLVARICQLY-PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 259
++ +LL+AR+ L P A S L++ FF Y+ +W + V+ L Q R
Sbjct: 788 VHISLLLARVAMLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRYQ-----RA 842
Query: 260 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 319
+DK M I+T P +N + N + T+ + E ++ A K E D + +
Sbjct: 843 TRDK---MVILTINTPVINVAANATIHTVHTLSSELEK------AAAKFELDATFSDVVG 893
Query: 320 PF-------------TFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERH 364
F F Y Y+++D+ N R GWVESRL L +++ R
Sbjct: 894 SFGDDTSKEIPIGVNEFLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELGRQ 953
Query: 365 TYNMLQCHPHPGDFSD 380
T L PG F +
Sbjct: 954 TPG-LDARIWPGRFHE 968
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 67/332 (20%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSG 117
V P +DID L +GP + FF + L + + + L V A +++ + G
Sbjct: 679 VWSPSSDIDCLVIGP---ISSKTFFAVAEKRLRKATDLGIRILRRVKAATGTMLELEVEG 735
Query: 118 VSIDLLYA----------RLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 167
+ DL Y R+SL +P D DS Q + L R D I R
Sbjct: 736 IKCDLQYCPASRVVEAWQRISL--LPPD-----DSTFY-LSSQALTKLQAFRDVDYIRRS 787
Query: 168 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL--YPNAVPSM-LVS 224
+P + FR R + WAKRRG+Y G+LGGI+ ++++R+C+L SM ++
Sbjct: 788 IPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMMLSRVCKLSCRKGGATSMDMIC 847
Query: 225 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL---MPIITPAYPCMN 278
RFF+ YT + W +L DP + P+ + + M I+T P +N
Sbjct: 848 RFFKYYTNFDWEREILC-------------DPSFFKDAPRYRRYANEPMVILTIHTPLVN 894
Query: 279 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------FFEAYKNYL 331
+ + S ++ R ++ E QR E+ + D+ W L T F + Y +Y+
Sbjct: 895 IARSASKASTRTIIKELQRMDELI-----STPDMSWSGLVGNITASDSSQEFLKTYTSYI 949
Query: 332 RIDIS------AENADDLRNWKGWVESRLRQL 357
+I + A+ + L GW+ESR +L
Sbjct: 950 KIHVQYWGMILAKGSTLL----GWLESRCCRL 977
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 170/400 (42%), Gaps = 67/400 (16%)
Query: 30 KLEKYLRDVNLYESQEEAVSREEVLGRLDQV-------------------------HGPG 64
+L + L D N + S EE R+EV+ + QV +G G
Sbjct: 559 QLMQSLWDHNAFPSPEEIRQRQEVVDLIRQVVNQRDPNLPTDTRLRFSFAVVPVGSYGLG 618
Query: 65 -----ADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMKFKFSG 117
+DID L +G A FF + L + E+ L V A +++ + G
Sbjct: 619 VWNSSSDIDLLVIGQLSA---RTFFALMVAKLRKAIHGEIKILRKVKAASGVMLELEARG 675
Query: 118 VSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFR 175
V +DL Y S V P+ LD+ D +++ LN R + R +P + FR
Sbjct: 676 VRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLLKLNPLRDMHYLQRTIPDLATFR 735
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL-YPNAVP---SMLVSRFFRVYT 231
+ R ++ WA+RRGVYS G+LGGI+ LL++ +C+L + A P + ++ FFR Y
Sbjct: 736 SAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKLSFQKAGPLSAADMICTFFRHYA 795
Query: 232 QWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 291
Q++W ++ G PR + ++ I+T P +N + S + R +
Sbjct: 796 QFQWDRTIVY------DPGFYKTAPRYFRTSREPIV-ILTQNTPKVNVARAASLPSARTL 848
Query: 292 MDEFQRGHEICEAMEKNEA--DVDWDTLFEPF-------TFFEAYKNYLRIDIS--AENA 340
EF+R M++ A ++ W L F +Y +Y ++++ A
Sbjct: 849 EQEFKR-------MDRQLASPEITWAGLLGAAGSSSGVEDFLTSYPSYAKVNVQYWGAGA 901
Query: 341 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
R GW+E R L + I+R + L P F+D
Sbjct: 902 AKGRLLVGWLEWRCVSLLVDIQRR-FPDLHARIWPARFTD 940
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 125/269 (46%), Gaps = 51/269 (18%)
Query: 99 ELHPVPDAHVPVMKFKF-SGVSIDLLYARLSLWVIPEDLDISQDSILQNA---DEQTVRS 154
E+ + A VP++K K+ ++IDL A V + +SQ SI QN D Q+ S
Sbjct: 413 EIFKIKHAKVPILKMKYKQQINIDLSLAI----VCNTEEKLSQISI-QNYLLFDNQSEVS 467
Query: 155 LNGCRVTDQILRLVP----KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+N + +I LV + F L+ ++ WA+RR VY G+LGGI +A+L A I
Sbjct: 468 INAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQYGYLGGIAFAILCANI 527
Query: 211 CQLYPNAVPSM----------------LVSRFFRVYTQWRWPNPVLL---CAIEEGSL-- 249
Q Y N M + +FF+ Y+ W WPNP++L +E L
Sbjct: 528 VQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPIILDQGFYDQENLLNP 587
Query: 250 -GLQV-------WDPRRNPKDKYHLMPIITP--------AYPCMNSSYNVSTSTLRIMMD 293
G QV W+P D HLMPII+P N++ V S L+I +
Sbjct: 588 NGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQKTITSTNTADQVLNSNLQIYLY 647
Query: 294 EFQRGHEICEAMEKNEADV-DWDTLFEPF 321
EF+R ++I + + K + + + + FE F
Sbjct: 648 EFKRAYKIMKKIYKGKIKLKELGSAFESF 676
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 157/388 (40%), Gaps = 74/388 (19%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHV---PVMKFKFS 116
V P +DID +C+GP + F L V +++ +
Sbjct: 685 VWTPSSDIDVMCIGPYSSA----VFMALAVQRIRKAGARGFKLVRRVRANTGTMLELEVQ 740
Query: 117 GVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQ 172
GV +DL Y + W P LD + + QT+ L R D + R +P +
Sbjct: 741 GVKMDLQYCAATSVAEGW--PAVLDRPASDPVFSLPAQTLGKLKAARDLDYLRRSLPDLA 798
Query: 173 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ-LYPNAVPSMLVS----RFF 227
FR R +R WA+ RG+YS G+LGGI ++L+AR+C+ L +A P + V+ FF
Sbjct: 799 KFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARVCKSLARDAGPGLSVADILVTFF 858
Query: 228 RVYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKDKYHL-----MPIITPAYPCMNSSY 281
Y + W + +DP N K YH + I+ P +N+S+
Sbjct: 859 HHYAAFDWQQNL-------------AFDPFFHNKKLSYHRTFREPLAILGFFPPMLNTSH 905
Query: 282 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE---PFT---------------F 323
+ ++R M EF+R + + DV WD F P T F
Sbjct: 906 AATIPSVRAMAGEFRRAAALLAS-----EDVTWDAFFRGGGPTTVPGPLSATLPSGAADF 960
Query: 324 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNML-QCHPH------ 374
+YK+++++++S R + GW ESR + + + R N+L + P
Sbjct: 961 LASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDVSRRLPNVLARMWPERFVDAA 1020
Query: 375 -----PGDFSDKSKPLYCSYFMGLQRKQ 397
GD + + Y +GL+ +Q
Sbjct: 1021 AAAASAGDGQESDREYQGCYLVGLEHQQ 1048
>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
Length = 199
Score = 94.7 bits (234), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 38/190 (20%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLD----------- 58
G+++P+SL PT++DL + + + L+ NL+E+++ RE+VLG ++
Sbjct: 10 GVSDPVSLDYPTEEDLKKGNDVVELLKSYNLFETEQALKKREKVLGMINKLFHEFVIELS 69
Query: 59 -----------QVHG--------------PGADIDTLCVGPRHATREEDFFGELHQMLTE 93
+++G P +DID + + P++ TRE FF E + L +
Sbjct: 70 ISQGINEEEAKEIYGNLYTFGSYRLGVITPNSDIDCIFLAPQNVTRE-IFFNEFYLKLQQ 128
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTV 152
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TV
Sbjct: 129 DRNVKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTV 188
Query: 153 RSLNGCRVTD 162
RSLNG RV D
Sbjct: 189 RSLNGIRVAD 198
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 69/329 (20%)
Query: 32 EKYLRDVNLYESQEEAVSREEVLGRLDQ-------VHGPGADIDTLCVGPRHATREEDFF 84
+ ++ ++ Y Q + R E L RL ++ P +D+DT+ V P++ R DFF
Sbjct: 79 DAFMANMQFYRKQPN-MPRSERLVRLYPFGSYYLGINEPSSDVDTVVVFPQYV-RIADFF 136
Query: 85 GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 144
+ ++ +MP+V+ + DA VP++ + + DL A +++ I + +
Sbjct: 137 DKFPTIIGQMPQVSYFDCIRDAKVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECT 196
Query: 145 QNADEQTVRSLNGCR----VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
N E+++ SLNG R V Q F+ +R +R W+KR+ +YSN GF GG
Sbjct: 197 ANMHEKSILSLNGYRTNIHVKSQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGG 256
Query: 201 INWALLVAR--------------------------------------------ICQLYPN 216
IN +LVA I +L +
Sbjct: 257 INCIILVANVMLRSTFELLQLDVEQQNAKHRGSLSDTLINSDTTSYIQYNSDSILELRES 316
Query: 217 AVPSMLVSRFFRVYTQWRW-------PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 269
++ + + Y++ W PNPV + S+ Q W R KDK M +
Sbjct: 317 VPLTLWLYNIYYYYSRLDWGTKAVQLPNPVQASSATRLSMTAQSW--MRRDKDK---MCL 371
Query: 270 ITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
+T P NS+ V +T ++ F++G
Sbjct: 372 LTAVEPYFNSTDKVFETTFDTILTNFRQG 400
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 156/363 (42%), Gaps = 49/363 (13%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LC+G + FF Q + + V L V + +++ +GV +DL
Sbjct: 599 SDIDCLCIG---TISSKTFFKLARQRIIKSDNRGVRILRKVEASTGTMLELSVNGVLMDL 655
Query: 123 LYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
Y + V E +I + N ++R L R I R +P + +FR RC
Sbjct: 656 QYCPATQVVERWSEFRNIPASDPIFNLSLLSLRKLKPYRDLLYIQRTLPSLSSFRLAYRC 715
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----NAVPSMLVSRFFRVYTQWRWP 236
++ WA +RG+YS GFLGG++ L+++ IC+ +A + LV+ FF Y Q+ W
Sbjct: 716 IKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASAADLVTSFFHHYGQFDWT 775
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
N ++ + PR N + M ++ P N ++ + L+ ++ EF+
Sbjct: 776 NEMVY------DVFFHKKRPRYN-RSAREPMVVLGFHAPNSNIAHTSTVPGLQTLVKEFK 828
Query: 297 -RGHEICEAMEKNEADVDWDTLF--------------EPFTFFEAYKNYLRIDIS--AEN 339
G +C E + WD F F E Y N++++DI
Sbjct: 829 AAGERLC------EQGMTWDAFFGLGPTLSSVSSPSLGAAGFLETYHNFVKVDIQFWGRT 882
Query: 340 ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-------DKSKPLYCSYFMG 392
++ GWVESR L ++I + N + PG F+ D+S+ + Y +G
Sbjct: 883 LTKGKSLVGWVESRCISLIVEIHKTLPNS-EVRIWPGRFTNNETSAADESRDYHGCYLIG 941
Query: 393 LQR 395
L +
Sbjct: 942 LSK 944
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 145/320 (45%), Gaps = 34/320 (10%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELH---PVPDAHVPVMKFKFSGVSID 121
+DID L +G F + Q L PE E+H + A +++ + GV D
Sbjct: 659 SDIDCLVIG---TISPRTFMALMVQKL-RRPEWQEIHILRKIKAASGTMLELQAGGVGFD 714
Query: 122 LLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 177
L Y + W P+ L++ + Q++ LN R + + R +P + FR
Sbjct: 715 LQYCAATSVAESW--PKALELPSSDSTFDLPMQSLLKLNAVRDLEYLQRTIPDLATFRKA 772
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL----YPNAVPSMLVSRFFRVYTQW 233
R ++ WAK RG+YS+ G+LGGI+ LL+A +C+L S ++ FF Y +
Sbjct: 773 YRFIKAWAKCRGIYSSKLGYLGGIHITLLLALVCKLSFRESGATHESDILCTFFSYYAHF 832
Query: 234 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 293
W N ++ +P+ + + L+ I++ P +N ++ + +++ + +
Sbjct: 833 DWKNDLVY------DTTYYTVEPKYHRSSREPLV-ILSIHPPKVNVAHASTVPSVKTLEE 885
Query: 294 EFQRGHEICEAMEKNEADVDWDTLFEP---FTFFEAYKNYLRIDIS--AENADDLRNWKG 348
EF R + + ++A V W+ + + F AY +Y+++D+ A+ R G
Sbjct: 886 EFDRANRLI-----SKAGVSWEDIAGQTGIYQFLNAYPSYIKVDVQYWAKAVAKGRALFG 940
Query: 349 WVESRLRQLTLKIERHTYNM 368
W+E R L + I R N+
Sbjct: 941 WLEFRCVSLLVDINRRFANV 960
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 156/373 (41%), Gaps = 67/373 (17%)
Query: 62 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVS 119
GP +D+D LC+G A FF Q L + + V A +++ + +
Sbjct: 661 GPRSDVDCLCIG---AISSTTFFALAIQRLRRASALGIRIVRKVKAATGIMLELQSGHIK 717
Query: 120 IDLLYARLS----LWV----IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI 171
+DL Y + W IP S D I + ++ L R + I R+VP +
Sbjct: 718 LDLQYCPAANIAERWQEVSRIP-----SHDPIF-DLSLHSLSKLQPYRDQEYIKRMVPDM 771
Query: 172 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL----YPNAVPSMLVSRFF 227
FR RC+ WAK GVYS+ G LGGI+ +++ R+ QL + LV+ FF
Sbjct: 772 YVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCRLHQLIHEKFGRVTVPELVAMFF 831
Query: 228 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 287
Y + W N +++ S G+Q RR+ ++ M I+T P +N + V+T +
Sbjct: 832 HHYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTVHAPTINVARAVTTPS 881
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-----------FFEAYKNYLRIDI- 335
LR ++ F+R E+ E W + + F AYK+Y+++++
Sbjct: 882 LRTIVSAFKRAEELM-----GEDGAKWSNILNDISISHNNQTGAEKFLAAYKSYIKVNVQ 936
Query: 336 ----SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP------- 384
S A L GW+ESR +L ++R + P F+ P
Sbjct: 937 YWGPSPTQASSL---IGWLESRFFRLLNDLDRQVLG-IHGRIWPARFTSIDAPDSENDGE 992
Query: 385 --LYCSYFMGLQR 395
Y +GL+R
Sbjct: 993 TEYQGCYLVGLER 1005
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 142/323 (43%), Gaps = 48/323 (14%)
Query: 60 VHGPGADIDTLCVGPRHAT--------REEDFFGELHQMLTEMPEVTELHPVPDAHVPVM 111
VHG +DID LCV A R F GE LT D+ VPV+
Sbjct: 694 VHGRDSDIDCLCVSTISAKTFFEVARKRIRRFGGERGIRLTRFV---------DSKVPVL 744
Query: 112 KFKFSGVSIDLLYARLSLWVIPEDLDIS----QDSILQNADEQTVRSLNGCRVTDQILRL 167
+ K + DL Y + SL +I I DS+ + ++SLN R T+ +LR
Sbjct: 745 EVKVGNIKFDLQYCQ-SLAIIEHWSAIPLLPPNDSVF-SLPASGLKSLNSYRDTEFLLRT 802
Query: 168 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY---PNAVPSMLVS 224
+P I FR R ++ WA GV+S+ G+LGG + LL+ARIC+L P V + +
Sbjct: 803 IPNINVFRLAHRFIKIWALASGVFSSRFGYLGGFHITLLLARICKLADGDPKDVTAAKIV 862
Query: 225 R-FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 283
R FF Y++ W + +C E S G R P M + + P +N + N
Sbjct: 863 RLFFAYYSKTEWLTEI-ICD-PEFSAGASYQRFSREP------MAVTSIYAPVVNVARNA 914
Query: 284 STSTLRIMMDEFQRGHEICEAMEKNEADVDWD--TLFEPFTFFEAYKNYLRIDISAENAD 341
+ ++ + EF E EK WD ++ F Y++Y++ID+ +
Sbjct: 915 TRHSVSALTREF-------ELAEKALDSGRWDLRSMGRENEFLAEYESYVKIDVQYW-GN 966
Query: 342 DLRNWKG---WVESRLRQLTLKI 361
LR K WVES + L + +
Sbjct: 967 TLRRGKALTLWVESTIPLLLVGL 989
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 51/331 (15%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMP-----EVTELHPVPDAHVPVMKFKFSGVS 119
+DID LC+GP ++ FF Q + + E+ L V +++ + V
Sbjct: 679 SDIDCLCIGPLSSST---FFALTTQRIKKASVESGLEIKLLRRVRANSGVMLELEVMSVR 735
Query: 120 IDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFR 175
+DL Y A W P L + + + QT+ L R D + +P + FR
Sbjct: 736 VDLQYCAATAVAEQW--PAVLKLPPNDPIFALPAQTLGKLKALRDLDYLRETIPDLSKFR 793
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN------AVPSMLVSRFFRV 229
R ++ WA+ RG+YS G+LGGI ++L+AR+C+L +VP +L S FF
Sbjct: 794 LAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLARVCKLLARDYGQEVSVPDIL-SSFFSH 852
Query: 230 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 289
Y + W N + L R+ ++ ++ PA +N++ + +++
Sbjct: 853 YASFDWRNKIAFDPFFHKKLNY-----LRSAREPLAILGFFPPA---LNTTLAATVPSMK 904
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT---------------FFEAYKNYLRID 334
+ E + +E+ NE + WDT F + F +YK++++I+
Sbjct: 905 AIARELSQANELL-----NEDGMTWDTFFGASSAGGDKTHSLARGAADFLSSYKSFVKIE 959
Query: 335 IS--AENADDLRNWKGWVESRLRQLTLKIER 363
+ + + GW+ESR L + + R
Sbjct: 960 LQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 177/451 (39%), Gaps = 41/451 (9%)
Query: 26 MRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPGADIDTLCVGPRHATREEDFFG 85
+ + L+ ++ + + EE R+EVL LD+ P A D P +T+
Sbjct: 563 LHSGALQNFVESHPSFPTTEETEKRKEVLAILDRTLRPLATADNKI--PSISTKIFFTLA 620
Query: 86 ELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS----LWVIPEDLDISQD 141
H +V L V +++ G+ +DL Y + W P L +
Sbjct: 621 VKHLKNAAAQDVRILRKVEAHSGTMLELNIQGIRLDLQYCAAAQIAGCW--PAPLSLPPT 678
Query: 142 SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 201
L + QT+ L R + P + F+ R + WA+ RG+Y+ G+L G
Sbjct: 679 DPLFSLPLQTLSKLKAIRDLAHLQNTTPDLPAFQMAYRLLVVWARSRGIYAARFGYLSGT 738
Query: 202 NWALLVARICQLYPNA----VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 257
+ +L++ RI +L ++ + LV FFR Y ++ W + + G+
Sbjct: 739 HISLMLDRIAKLLYHSNRDVTAADLVCAFFRYYAEFDWSKNTVEDPLARAIPGMG----- 793
Query: 258 RNPKDKYHLMPIITPAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD 315
P ++ P++ Y P +N + + + ++ +E QR H + + + W
Sbjct: 794 -RPYQRHASEPMVVLGYHIPRVNIARAATVPAVGVLTEELQRAHALVTKQPEQGSTPTWA 852
Query: 316 TLF-----EPFTFFEAYKNYLRIDISAENADDL--RNWKGWVESRLRQLTLKIERHTYNM 368
+ F AY++Y+R+D+ + R GWVESR L + + R
Sbjct: 853 EIIGEERNSAAEFLSAYRSYIRVDVQYWGTSSVKGRQLIGWVESRCPTLLIDLNRKIPE- 911
Query: 369 LQCHPHPGDF----SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 424
+ P F S++ + Y +GL ++Q + D +L + + ++
Sbjct: 912 IHARMWPLRFARGASNEKGDQHGCYLVGLAKRQDSDSDSKTEADRKLAQSKLDGVLERFS 971
Query: 425 LRKPGMQ---------ISVAHVTRRNLPNFV 446
+ G + + V+HV+R L +
Sbjct: 972 DQIRGNEKFFDPTSGWVEVSHVSRAKLEELI 1002
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 51/364 (14%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQML--TEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LC+G + FF Q + ++ V L V + +++ +GV +DL
Sbjct: 678 SDIDCLCIG---TISSKTFFKLARQRIIRSDNRGVRVLRKVEASTGTMLELSVNGVLMDL 734
Query: 123 LYARLSLWVI---PEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
Y ++ V+ E +I + N ++R L R I R +P +FR R
Sbjct: 735 QYCP-AIQVVERWSEFRNIPASDPMFNLSLLSLRKLKPYRDLLYIQRTLPSPSSFRLAYR 793
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----NAVPSMLVSRFFRVYTQWRW 235
C++ WA +RG+YS GFLGG++ L+++ +C+ +A + LV+ FF Y Q+ W
Sbjct: 794 CIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASAADLVASFFHHYGQFDW 853
Query: 236 PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEF 295
N ++ + PR N + M ++ P N ++ + L+I++ EF
Sbjct: 854 TNDMVY------DVFFHKKRPRYN-RSTREPMVVLGFHTPNSNIAHTSTMPGLQILVKEF 906
Query: 296 QRGHE-ICEAMEKNEADVDWDTLFEPFT--------------FFEAYKNYLRIDIS--AE 338
+ + +C E + WD F P + F E Y+N++++DI
Sbjct: 907 KAADKRLC------EPGMTWDAFFGPGSTLSPVSSPSLGAAGFLETYQNFVKVDIQFWGR 960
Query: 339 NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-------DKSKPLYCSYFM 391
++ GWVESR L ++I + + PG F+ D+SK + Y +
Sbjct: 961 TLTKGKSLVGWVESRCISLIVEIHK-ALPKSEVRIWPGRFTDNETNVADQSKDYHGCYLI 1019
Query: 392 GLQR 395
L +
Sbjct: 1020 SLSK 1023
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 31/213 (14%)
Query: 28 TRKLEKYLRDVNL------YESQEEA-------------VSREEVLGRLDQ-------VH 61
TRK E LR++ L YE+ ++A + R E L RL ++
Sbjct: 112 TRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSERLVRLYPFGSYYLGIN 171
Query: 62 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSID 121
P +D+DT+ + P++ R DFF + ++ +MP+V+ + DA VP++ + V D
Sbjct: 172 EPSSDVDTVVIFPQYV-RIADFFDKFPTIIGQMPQVSYFDCIRDAKVPLITLTYDSVDFD 230
Query: 122 LLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR----VTDQILRLVPKIQNFRTT 177
L A +++ + + + N E+++ SLNG R V Q F+
Sbjct: 231 LSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVKSQFAGNNIFYSTFQNA 290
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 210
+R +R W KR+ +YSN GF GGIN +LVA +
Sbjct: 291 VRALRLWCKRKNIYSNRCGFFGGINCIILVANV 323
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 187 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR----WPNPVLLC 242
RR VY N+ + G+ A++VAR+CQ+ P + P++L+ FF Y QW +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 243 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
E G + GL WDPRR+ + L+P+I PAYP +N + NVS L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYA 120
Query: 299 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 352
H + + ++ +T+++PF + Y + ++++ E + L W +V S
Sbjct: 121 HRLL-----SNSETPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLS 175
Query: 353 RLRQLTLKIERHTYNMLQCHPHPGDFSD---KSKPLYCSYFMGLQRKQGVPVGEGEQF 407
+LR L +ER ++ P+P +D +S P + G G+ G +F
Sbjct: 176 KLRILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRF 229
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 185/473 (39%), Gaps = 124/473 (26%)
Query: 28 TRKLEKYLRDVNL------YESQEEA-------------VSREEVLGRLDQ-------VH 61
TRK E LR++ L YE+ ++A + R E L RL ++
Sbjct: 55 TRKKEAILRNLELIISDWVYETYKDAFLANMQFYRKQPNMPRSERLVRLYPFGSYYLGIN 114
Query: 62 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSID 121
P +D+DT+ + P++ R DFF + ++ +MP+V+ + DA VP++ + V D
Sbjct: 115 EPSSDVDTVVIFPQYV-RIVDFFDKFPTIIGQMPQVSYFDCIRDAKVPLITLTYDSVDFD 173
Query: 122 LLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR----VTDQILRLVPKIQNFRTT 177
L A +++ + + + N E+++ SLNG R V Q F+
Sbjct: 174 LSAAVMAVNRVTDAIPFLDPECTANMHEKSILSLNGYRTNIHVKSQFAGNNIFYSTFQNA 233
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVAR---------------------------- 209
+R +R W KR+ +YSN GF GGIN +LVA
Sbjct: 234 VRALRLWCKRKNIYSNRCGFFGGINCIILVANVMLRSSFELLQSDVEQKNMEYQLSSSIT 293
Query: 210 ---------------------ICQLYPNAVPSMLVSRFFRVYTQWRW-------PNPVLL 241
I +L + ++ + + Y++ W PNPV
Sbjct: 294 QNDPTNPSDLQSPYIQYNSDSILELRESVPLTLWLYNIYYYYSRLDWSTKAIQLPNPVQA 353
Query: 242 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG-HE 300
A S+ Q W R KDK M ++T P NS+ + +T ++ F+ G
Sbjct: 354 SAATRLSMTAQSWI--RRDKDK---MCLLTAVEPYFNSTDKIFETTFDTILANFRHGVKA 408
Query: 301 ICEAMEKNEADVD--------------WDTLF--EPFTFFE--AYK---NYLRID---IS 336
I + + A WDT F + FF Y+ YL I +S
Sbjct: 409 ILDIVRGVVAAYSFGLEIARPLLRPSLWDTFFYDDSLEFFSNPGYRPNIMYLLITRNVMS 468
Query: 337 AENADDLRNWKGWVESRL----RQLTLKIERHTYN---MLQCHPHPGDFSDKS 382
+ + +L K ++ESR+ R+L ++ N +++ HP P + S
Sbjct: 469 SNSMVELDKVKSFLESRINRICRRLLTNLQPAVGNNARLIRVHPLPTWYDSTS 521
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 24/208 (11%)
Query: 187 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 242
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 243 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
E G + GL WDPRR+ + L+P+I PAYP +N + NV +L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYA 120
Query: 299 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 352
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 353 RLRQLTLKIERHTYNMLQCHPHPGDFSD 380
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----LVDARPYPQKLND 199
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 179/447 (40%), Gaps = 91/447 (20%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------------- 60
P+ LA D L K+ L D ++ +E+ V R+ V+ L Q+
Sbjct: 582 PLQLAS-LPDTLSSLDKIVSSLEDSSMLPGEEDIVIRKTVVATLAQILTEPIHDASGKDI 640
Query: 61 ----------------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHP 102
GP +D+D LC+G A FF Q L + + +
Sbjct: 641 KTPLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRK 697
Query: 103 VPDAHVPVMKFKFSGVSIDLLY---ARLS-LWV----IPEDLDISQDSILQNADEQTVRS 154
V A +++ + + +DL Y A+++ W IP S D I + ++
Sbjct: 698 VKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIP-----SHDPIF-DLSLHSLSK 751
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL- 213
L R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R+ QL
Sbjct: 752 LQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLI 811
Query: 214 ---YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
+ LV+ FF Y + W N +++ S G+ RR+ ++ M I+
Sbjct: 812 HERFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP---MVIL 861
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------- 322
T P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 862 TAHVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISISQNNQTG 916
Query: 323 ---FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
F AY +Y+++++ + + GW+ESR +L + R + P
Sbjct: 917 AEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGRIWPAR 975
Query: 378 FSDKSKP---------LYCSYFMGLQR 395
F+ P Y +GL+R
Sbjct: 976 FTSIDAPDSENDGETEYQGCYLVGLER 1002
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 179/447 (40%), Gaps = 91/447 (20%)
Query: 14 PISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------------- 60
P+ LA D L K+ L D ++ +E+ V R+ V+ L Q+
Sbjct: 582 PLQLAS-LPDTLSSLDKMVSSLEDSSMLPGEEDIVIRKTVVATLAQILTEPIHDASGKDI 640
Query: 61 ----------------HGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHP 102
GP +D+D LC+G A FF Q L + + +
Sbjct: 641 KTPLVLIPVGSYGLGTWGPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRK 697
Query: 103 VPDAHVPVMKFKFSGVSIDLLY---ARLS-LWV----IPEDLDISQDSILQNADEQTVRS 154
V A +++ + + +DL Y A+++ W IP S D I + ++
Sbjct: 698 VKAATGVMLELQSGHIKLDLQYCPAAKIAERWQEVSRIP-----SHDPIF-DLSLHSLSK 751
Query: 155 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL- 213
L R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R+ QL
Sbjct: 752 LQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLI 811
Query: 214 ---YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 270
+ LV+ FF Y + W N +++ S G+ RR+ ++ M I+
Sbjct: 812 HERFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP---MVIL 861
Query: 271 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------- 322
T P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 862 TAHVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISISQNNQTG 916
Query: 323 ---FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 377
F AY +Y+++++ + + GW+ESR +L + R + P
Sbjct: 917 AEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGRIWPAR 975
Query: 378 FSDKSKP---------LYCSYFMGLQR 395
F+ P Y +GL+R
Sbjct: 976 FTSIDAPDSENDGETEYQGCYLVGLER 1002
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 177/405 (43%), Gaps = 64/405 (15%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSG 117
V P +D+D L +GP + FF Q L + + L V A +++ + +G
Sbjct: 688 VWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKVKAATGTMIELEVNG 744
Query: 118 VSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 174
+ DL Y AR+ L D I + Q + L R D I R +P + F
Sbjct: 745 IKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRDLDYIRRSIPDLAAF 803
Query: 175 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV---PSMLVSRFFRVYT 231
RT R + WAK RGVY + G+LGGI+ ++++R+ +L+ V + ++ RFF+ Y
Sbjct: 804 RTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTDMIYRFFQYYA 863
Query: 232 QWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL---MPIITPAYPCMNSSYNVST 285
+ W + V+DP P+ + + M I+T P +N + +
Sbjct: 864 DFDWEHKT-------------VFDPFFFESTPRYRRYANEPMVILTINVPLINVA-RATA 909
Query: 286 STLRIMMDEFQRGHEICEAMEKNEADVDWDTL-------FEPF-TFFEAYKNYLRIDIS- 336
+ R +++E +R ++ ++ D+ W L EP F AY +Y++I +
Sbjct: 910 GSARTIVEELRRMAQLM-----SDPDMTWSKLLNSTVSTLEPSEEFLTAYSSYIKIHVQY 964
Query: 337 -AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------SDKSKPLYCSY 389
+ + GW+ESR +L I+R + + P F SD S+ C Y
Sbjct: 965 WGISLAKGKTLLGWLESRCVRLLNDIDRKLPS-IYARMWPARFSSKDAMSDDSEYQGC-Y 1022
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS--MYTLRKPGMQI 432
+GL +++ EG + +T +E KQ++ M L K QI
Sbjct: 1023 LIGLTKRE----TEGTE---AMTKEERKQSLDLMMRVLEKFKTQI 1060
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 152/360 (42%), Gaps = 43/360 (11%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSI 120
P +D+D LC+G A FF Q L + + + V A +++ + + +
Sbjct: 663 PDSDVDCLCIG---AISSTTFFSLAIQRLRKASALGIRIMRKVKAATGMMLELQSGNIKL 719
Query: 121 DLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRT 176
DL Y + W E I + + + ++ L R + I R+VP + FR
Sbjct: 720 DLQYCPAANIAERW--QEVSRIPSNDPIFDLSLHSLSKLQPYRDQEYIKRMVPDMNVFRL 777
Query: 177 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQ 232
RC+ WAK GVY++ G LGGI+ ++++R+ QL V + LV+ FF Y
Sbjct: 778 AHRCITQWAKSSGVYTSKFGLLGGIHITMMLSRLHQLLHGKVGRVTIPELVAMFFHHYAH 837
Query: 233 WRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMM 292
+ W N +++ S G+Q R + M I+T P +N + V+ +LR +
Sbjct: 838 FDWKNSMVV------SPGVQ----SRYRRSMREPMVILTVHVPTVNVARAVTAHSLRTIA 887
Query: 293 DEFQRGHEICEAMEKNEADVDWDTLFE------PFTFFEAYKNYLRIDIS--AENADDLR 344
F+R E+ +++ DT F A+ +Y+++++ +
Sbjct: 888 SAFKRAEELLAENGARWSNILRDTSISHNKETGAEKFLGAHNSYIKVNVQYWGPSPTQAS 947
Query: 345 NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP---------LYCSYFMGLQR 395
+ GW+ESR +L ++R + P F+ K P Y +GL+R
Sbjct: 948 SLVGWIESRFFRLLNDLDRQVPGVY-GRIWPARFTSKDSPDSPDDGETEYQGCYLVGLER 1006
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 187 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR----WPNPVLLC 242
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW +PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 243 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
E G + GL WDPRR+ + L+P+I PAYP +N + NV L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYA 120
Query: 299 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 352
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 353 RLRQLTLKIERHTYNMLQCHPHPGDFSD 380
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----IVDARPYPQKLND 199
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 49/333 (14%)
Query: 62 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVS 119
GP +D+D LC+G A FF Q L + + + V A +++ + +
Sbjct: 661 GPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVKAATGIMLELQSGHIK 717
Query: 120 IDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFR 175
+DL Y + W E I + + + ++ L R + I R+VP + FR
Sbjct: 718 LDLQYCPAANVAERW--QEISRIPFNDPIFDLPPHSLSELQPYRDQEYIKRMVPDMYVFR 775
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYT 231
RC+ WAK GVYS+ G LGGI+ ++++R+ QL + LV+ FF Y
Sbjct: 776 LAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSRLHQLIHEKCGRVTAPELVAMFFHHYA 835
Query: 232 QWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 291
+ W N +++ S G+Q RR+ ++ M I+T P +N + V+ +LR +
Sbjct: 836 HFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTVHVPTINVARAVTAPSLRTI 885
Query: 292 MDEFQRGHEICEAMEKNEADVDWDTLFEPFT-----------FFEAYKNYLRIDI----- 335
+ F+R E+ E W + + F AY +Y+++++
Sbjct: 886 VSAFKRAEELM-----GEDGARWSNILNDISISHNNQTGAEKFLAAYNSYIKVNVQYWGP 940
Query: 336 SAENADDLRNWKGWVESRLRQLTLKIERHTYNM 368
S A L GW+ESR +L ++R +
Sbjct: 941 SPTQASSL---IGWLESRFFRLLNDLDRQVLGI 970
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 175/431 (40%), Gaps = 77/431 (17%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LCVG + + FF Q L + E V L V A +++ + + V DL
Sbjct: 696 SDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLELEINSVKFDL 752
Query: 123 LY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y A W+ E + + S L + + L R + R VP FR
Sbjct: 753 QYCPAAAVAERWL--EVPHLPRSSPLFDLALLPLMKLQPYRDQAYLQRTVPNPATFRLLH 810
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWR 234
R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P+ ++ FF Y +
Sbjct: 811 RIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAADILCTFFNYYGNFN 870
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP-----IITPAYPCMNSSYNVSTSTL 288
W V+ +DP + K +YH P I+T P MN + + S +
Sbjct: 871 WKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAPVMNVARSASIPST 917
Query: 289 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------------FFEAYKNYLRIDI 335
R ++DE +R + +E + +W L F +Y +Y++I++
Sbjct: 918 RTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDEFLRSYNSYIKINV 972
Query: 336 SAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKP---- 384
+ + GW+ESR L + R + +Q P F+ D S P
Sbjct: 973 QYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFTQIEDHDDSTPAQEE 1031
Query: 385 --LYCSYFMGLQRKQGV--PVGEGEQFDIRL-------TVKEFKQAVSMYT--LRKPGMQ 431
Y +GL + + P + D +L ++ +F + Y
Sbjct: 1032 REYQGCYLIGLTKAEHATDPTRTLSKSDRKLAHDTLQASIDQFASNIHNYKKYFDSASAW 1091
Query: 432 ISVAHVTRRNL 442
+ V+HV + NL
Sbjct: 1092 VDVSHVKQGNL 1102
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 45/262 (17%)
Query: 166 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 221
R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 222 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 281
+++ FF+ Y Q+ W V+ S + + P+R P + I++ P +N +
Sbjct: 66 IITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVAR 118
Query: 282 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRID 334
S + R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y +++
Sbjct: 119 AASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVN 173
Query: 335 IS--AENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPH-----------PGDFSD 380
+ A R GW+E R ++L + R H Q H H P F+D
Sbjct: 174 VQYWGGAATKGRMLVGWLEWRC--VSLLVGRLHPLPTFQRHIHRKFPDIHARIWPARFTD 231
Query: 381 ------KSKPLYCSYFMGLQRK 396
+K Y +GL R+
Sbjct: 232 MEEVGETTKEYQGCYLIGLTRE 253
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 157/376 (41%), Gaps = 68/376 (18%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LCVG + + FF Q L + E V L V A +++ + + V DL
Sbjct: 696 SDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLELEINSVKFDL 752
Query: 123 LY----ARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 177
Y A W+ +P + + S L + + L R + R VP FR
Sbjct: 753 QYCPAAAVAERWLEVPH---LPRSSPLFDLALLPLMKLQPYRDQAYLQRTVPNPATFRLL 809
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP----SMLVSRFFRVYTQW 233
R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P + ++ FF Y +
Sbjct: 810 HRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAADILCTFFNYYGNF 869
Query: 234 RWPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP-----IITPAYPCMNSSYNVSTST 287
W V+ +DP + K +YH P I+T P MN + + S +
Sbjct: 870 NWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAPVMNVARSASIPS 916
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------------FFEAYKNYLRID 334
R ++DE +R + +E + +W L F +Y +Y++I+
Sbjct: 917 TRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDEFLRSYNSYIKIN 971
Query: 335 ISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKP--- 384
+ + + GW+ESR L + R + +Q P F+ D S P
Sbjct: 972 VQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFTQIEDHDDSTPAQE 1030
Query: 385 ---LYCSYFMGLQRKQ 397
Y +GL + +
Sbjct: 1031 EREYQGCYLIGLTKAE 1046
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 404 GEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 458
GEQFDIR+TV EF+ +V MYTL KPGM+I+V+H+ RR++P+FVFPGGVRP R +K
Sbjct: 1 GEQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTK 55
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 194/492 (39%), Gaps = 81/492 (16%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LCVG A FF + Q L + V + V A +++ + +G+ DL
Sbjct: 657 SDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDL 713
Query: 123 LY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y A W+ E ++ Q S L N L R + R + FR
Sbjct: 714 QYCPAAAVAKRWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIRNPATFRLLH 771
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYTQWRWP 236
R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++ FF Y + W
Sbjct: 772 RIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADILCTFFNHYGNFNWE 831
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
+ I P RN + M I T P +N + + S ++R ++DE +
Sbjct: 832 KDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMK 884
Query: 297 RGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNYLRIDISAENADDL 343
R + +E + +W L + F ++Y +Y++I++ +
Sbjct: 885 RAENLI-----SEGNANWAELLGVYPKPGKSALSSSADEFLKSYNSYIKINVQYWSLSLA 939
Query: 344 R--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSKP------LYCSYF 390
+ + GWVESR L + R + +Q P F+ + S P Y
Sbjct: 940 KGSSLVGWVESRCLDLLNDLYRE-FPDIQARIWPARFTQNEEHENSTPAQEEHEYQGCYL 998
Query: 391 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGG 450
+GL++ D T +F + ++ TL+ M SVA + N
Sbjct: 999 VGLRKAD-------HATDPTRTFSKFDRKLAQNTLQA-SMDQSVASSVQSN--------- 1041
Query: 451 VRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSG 510
K + SR +L R+ + DD + D T + + P S+
Sbjct: 1042 -------KKYFQSRLSLGRRFGNF-----DDNEAATEADSISSTRKKGTFLSTSKPVSTA 1089
Query: 511 EFREGSPIMSTI 522
+ R S I++ +
Sbjct: 1090 KLRPASDILNRL 1101
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 176/405 (43%), Gaps = 64/405 (15%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSG 117
V P +D+D L +GP + FF Q L + + L V A +++ + +G
Sbjct: 688 VWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKVKAATGTMIELEVNG 744
Query: 118 VSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 174
+ DL Y AR+ L D I + Q + L R D I R +P + F
Sbjct: 745 IKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRDLDYIRRSIPDLAAF 803
Query: 175 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV---PSMLVSRFFRVYT 231
R R + WAK RGVY + G+LGGI+ ++++R+ +L+ V + ++ RFF+ Y
Sbjct: 804 RKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTDMIYRFFQYYA 863
Query: 232 QWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL---MPIITPAYPCMNSSYNVST 285
+ W + V+DP P+ + + M I+T P +N + +
Sbjct: 864 DFDWEHET-------------VFDPFFFESTPRYRRYANEPMVILTINVPLINVA-RATA 909
Query: 286 STLRIMMDEFQRGHEICEAMEKNEADVDWDTL-------FEPF-TFFEAYKNYLRIDISA 337
+ R +++E +R ++ ++ D+ W L EP F AY +Y++I +
Sbjct: 910 GSARTIVEELRRMAQLM-----SDPDMTWSKLLNSTVSTLEPSEEFLTAYSSYIKIHVQY 964
Query: 338 ENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------SDKSKPLYCSY 389
+ GW+ESR +L I+R + + P F SD S+ C Y
Sbjct: 965 WGISLAKGKMLLGWLESRCVRLLNDIDRKLPS-IYARIWPARFSSKDAMSDDSEYQGC-Y 1022
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT--LRKPGMQI 432
+GL ++ E E+ + +T +E KQ++ + T L K QI
Sbjct: 1023 LIGLTKR------ETERTEA-MTKEERKQSLDLMTRVLEKFKTQI 1060
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 176/405 (43%), Gaps = 64/405 (15%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSG 117
V P +D+D L +GP + FF Q L + + L V A +++ + +G
Sbjct: 688 VWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKVKAATGTMIELEVNG 744
Query: 118 VSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 174
+ DL Y AR+ L D I + Q + L R D I R +P + F
Sbjct: 745 IKCDLHYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRDLDYIRRSIPDLAAF 803
Query: 175 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV---PSMLVSRFFRVYT 231
R R + WAK RGVY + G+LGGI+ ++++R+ +L+ V + ++ RFF+ Y
Sbjct: 804 RKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTDMIYRFFQYYA 863
Query: 232 QWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDKYHL---MPIITPAYPCMNSSYNVST 285
+ W + V+DP P+ + + M I+T P +N + +
Sbjct: 864 DFDWEHET-------------VFDPFFFESTPRYRRYANEPMVILTINVPLINVA-RATA 909
Query: 286 STLRIMMDEFQRGHEICEAMEKNEADVDWDTL-------FEPF-TFFEAYKNYLRIDISA 337
+ R +++E +R ++ ++ D+ W L EP F AY +Y++I +
Sbjct: 910 GSARTIVEELRRMAQLM-----SDPDMTWSKLLNSTVSTLEPSEEFLTAYSSYIKIHVQY 964
Query: 338 ENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF------SDKSKPLYCSY 389
+ GW+ESR +L I+R + + P F SD S+ C Y
Sbjct: 965 WGISLAKGKMLLGWLESRCVRLLNDIDRKLPS-IYARIWPARFSSKDAMSDDSEYQGC-Y 1022
Query: 390 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT--LRKPGMQI 432
+GL ++ E E+ + +T +E KQ++ + T L K QI
Sbjct: 1023 LIGLTKR------ETERTEA-MTKEERKQSLDLMTRVLEKFKTQI 1060
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus heterostrophus
C5]
Length = 1226
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 151/362 (41%), Gaps = 47/362 (12%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LC+G + + FF Q L + P+V L V A +++ +G+ +DL
Sbjct: 678 SDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKVEAATGTMLELSINGILMDL 734
Query: 123 LYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
Y + V E +I + N ++R L R + R +P FR R
Sbjct: 735 QYCPAAQVVERWSELAEIPASDPIFNLSMLSLRKLKPYRDLLYLQRTIPSRSIFRQAYRL 794
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWP 236
++ WA +RG+Y+ G+LGG++ L+++ +C+ + V S+ +V FF+ Y + W
Sbjct: 795 IKLWAVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHNVGSVSIADIVVSFFQHYANFDWS 854
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
N ++ A PR N + M I++ P N + + L+ ++ E +
Sbjct: 855 NDMVYDAF------FHKKKPRYN-RSAREPMVILSFHAPNSNFAQKSTVPGLQTLIKELK 907
Query: 297 RGHEICEAMEKNEADVDWDTLF--------EP------FTFFEAYKNYLRIDIS--AENA 340
M+ +E + W F EP F Y ++++IDI
Sbjct: 908 AAD-----MKLSEPGMTWQKFFSTSSDLASEPRLPYGAVEFLNTYNDFVKIDIQFWGRML 962
Query: 341 DDLRNWKGWVESRLRQLTLKI-------ERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 393
++ GWVESR + + I E + L P D +D + C Y +GL
Sbjct: 963 AKGKSLVGWVESRCISIVVDIHKALPGSEVRVWPALFTDDAPNDSTDSNDFQGC-YLIGL 1021
Query: 394 QR 395
+
Sbjct: 1022 SK 1023
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 64/373 (17%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LCVG + + FF + Q L + L V +++ G+S DL
Sbjct: 670 SDLDCLCVG---SVSSKTFFKLVRQRLARARNRGIKILRKVEAKTGTMLELSVDGISADL 726
Query: 123 LY---ARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y AR++ W E +S + N ++R L R I R +P + FRT
Sbjct: 727 HYCPAARIAERW--SEFHGLSASDPIFNLPALSLRKLKSYRDFLYIQRTLPSLSAFRTAF 784
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-----QLYPNAVPSMLVSRFFRVYTQW 233
RC++ WA +RG+YS+ G+L G + L++ IC Q P M+VS FF Y +
Sbjct: 785 RCIKLWAVQRGIYSSKFGYLSGTHITLMLTWICKKLRYQSGSVGPPDMVVS-FFSYYANF 843
Query: 234 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMNSSYNVSTSTL 288
W N +L A S + +YH P++ Y P N ++ +T L
Sbjct: 844 DWTNELLFDAFFHES------------RPRYHRSAREPMVILGYHAPHSNIAHTSTTPGL 891
Query: 289 RIMMDEFQRGHEICEAMEKNEADVDWDTLF-EPFT---------------FFEAYKNYLR 332
+I+M+EF+ ++ + + W F +P + F +++
Sbjct: 892 QILMNEFRAAADVLSS-----PGITWAKFFGDPSSLKDSVQLHLSQMTEHFLATQHSFVT 946
Query: 333 IDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-DKS-----KP 384
+++ + GW+ESR L + I + L+ P F+ DK+ K
Sbjct: 947 VEMQYWGRTLAKGKGLVGWIESRCLSLVVDIHK-MLPELEVRIWPTRFTNDKADLKELKE 1005
Query: 385 LYCSYFMGLQRKQ 397
+ Y +GL R +
Sbjct: 1006 YHGCYLIGLTRSE 1018
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 47/362 (12%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LC+G + + FF Q L + P+V L V +++ +G+ +D+
Sbjct: 678 SDIDCLCIG---SISSKTFFKLARQRLVKAGNPQVRILRKVEATTGTMLELSVNGILMDM 734
Query: 123 LYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
Y + V E DI + N ++R L R + R +P FR R
Sbjct: 735 QYCPAAQVVERWSEFADIPASDPIFNLSMLSLRKLKPYRDLLYLQRTIPSRSLFRQAYRL 794
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWP 236
++ W +RG+Y+ G+LGG++ L+++ +C+ + V S+ +V FF+ Y + W
Sbjct: 795 IKLWGVQRGLYAAKFGYLGGMHITLMLSWVCKSLAHDVGSVNVADIVVSFFQHYANFDWS 854
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
N ++ A PR N + M I++ P N + + L++++ EF+
Sbjct: 855 NDMVYDAFFHKK------KPRYN-RSTREPMVILSFHAPNSNFAQKSTVPGLQMLIKEFK 907
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFT--------------FFEAYKNYLRIDIS--AENA 340
M+ +E + W F + F AY ++++IDI
Sbjct: 908 AAD-----MKLSEPGMTWQKFFSTSSDLALKPCLPSGVVEFLNAYSDFVKIDIQFWGRML 962
Query: 341 DDLRNWKGWVESRLRQLTLKI-------ERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 393
+ GWVESR + + I E + L P D +D + C Y +GL
Sbjct: 963 AKGKGLVGWVESRCISIVVDIHKALPGSEVRVWPALFTDDAPNDSTDSNDFQGC-YLIGL 1021
Query: 394 QR 395
+
Sbjct: 1022 SK 1023
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 144/337 (42%), Gaps = 57/337 (16%)
Query: 62 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVS 119
GP +D+D LC+G A FF Q L + + + V A +++ + +
Sbjct: 661 GPRSDVDCLCIG---AISSTTFFALAIQRLRKASALGIRIVRKVKAATGVMLELQSGHIK 717
Query: 120 IDLLYARLS--------LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKI 171
+DL Y + + IP S D I + ++ L R + I R+VP +
Sbjct: 718 LDLQYCPAANVAERWQEISRIP-----SHDPIF-DLSLHSLSKLQPYRDQEYIKRMVPDM 771
Query: 172 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL----YPNAVPSMLVSRFF 227
FR RC+ AK GVYS+ G LGGI+ ++++++ QL + LVS FF
Sbjct: 772 YVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQLHQLVHEKFGRVTVPELVSMFF 831
Query: 228 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 287
Y + W N +++ S G+Q RR+ ++ M I+T P +N + V+ +
Sbjct: 832 HYYAHFDWKNNMVV------SPGVQT-RYRRSLREP---MVILTVHVPTINVARAVTAPS 881
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-----------FFEAYKNYLRIDI- 335
LR ++ F R E+ E W + + F AY +Y+++++
Sbjct: 882 LRTIVSAFNRAEELM-----GEDGARWSNILNDISISHNNQTGAEKFLTAYNSYIKVNVQ 936
Query: 336 ----SAENADDLRNWKGWVESRLRQLTLKIERHTYNM 368
S A L GW+ESR +L ++R +
Sbjct: 937 YWGPSPTQASSL---IGWLESRFFRLLNDLDRQALGI 970
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 161/374 (43%), Gaps = 55/374 (14%)
Query: 28 TRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPG-----ADIDTLCVGPRHATREED 82
R LE L+DV+L S+++A S + +G G +DID LC+GP + +
Sbjct: 615 VRALEVALKDVDLSASEDDARSGPPFVVVPVGSYGLGVWTSSSDIDCLCIGPFSS---KT 671
Query: 83 FFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDI 138
FF Q L ++ + V +++ + G+ +DL Y A S+ W PE +
Sbjct: 672 FFALAVQRLKRAADIRIIRRVKANSGYMLELEVHGIKVDLQYCAAASIAERW--PEVMKR 729
Query: 139 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 198
+ QT+ L R + R +P + +R ++ WA+ RG+YS GFL
Sbjct: 730 PANDSAFALPFQTLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFL 789
Query: 199 GGINWALLVARICQLYPNA----VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVW 254
GGI+ ++L+ IC+ + P+ +V FFR Y+ + W + V+
Sbjct: 790 GGIHISVLLVPICKALASGSEIVSPTDIVVTFFRHYSNFDWKTSM-------------VF 836
Query: 255 DPRRNPKDKYHL-----MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 309
DP + +Y+ + +I P +N++ S T+ + E +R + + +E
Sbjct: 837 DPFFHKDLRYNRTFREPLCLIGWHAPALNTAPIASNPTVMAIAAEIERANRLL-----SE 891
Query: 310 ADVDWDTLF------------EPFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLR 355
W+++ F + +K Y++ID ++ + GW+ESR
Sbjct: 892 DGCTWNSVLGLQSAQEAGKSRGATEFLKEFKTYVKIDAHYWGPSQEKSGRFIGWLESRCV 951
Query: 356 QLTLKIERHTYNML 369
L + + R +++
Sbjct: 952 MLLVDVNRKLQHLV 965
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 62 GPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVS 119
GP +DID LC+GP FF Q L + + + V A +++ + +
Sbjct: 661 GPNSDIDCLCIGP---ISTSTFFSLAIQRLKKASAHGIRIMRKVKAATGMMLELQAGNIK 717
Query: 120 IDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFR 175
+DL Y + W E I + + ++ L R + I R+VP + F+
Sbjct: 718 LDLQYCPAANIAKRW--QEATKIPPHDPIFDLSIYSLSKLQPFRDQEYIKRMVPDMYVFQ 775
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN-----AVPSMLVSRFFRVY 230
RC+ WAK GVYS+ G LGGI+ ++++R+ QL VP +L + FF Y
Sbjct: 776 LAHRCITLWAKTSGVYSSKFGLLGGIHITMMLSRLHQLLHEDIGRVTVPELL-TMFFHHY 834
Query: 231 TQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 290
+ W N V+ + +P M I+T P +N + V+ S+LR
Sbjct: 835 ANFDWKNKVVDSPGTRSKYRRLLREP----------MVILTVHIPTINVARAVTASSLRT 884
Query: 291 MMDEFQRGHEICEAMEKNEADVDWDTLFE------PFTFFEAYKNYLRIDI 335
++ F+R E+ ++V DT F AY +Y+++++
Sbjct: 885 IISAFKRVEELLAEDGARWSNVLSDTSISHNNQTGAEKFLVAYNSYIKVNV 935
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 143/338 (42%), Gaps = 41/338 (12%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LCV A FF + Q L + V + V A +++ + +G+ DL
Sbjct: 698 SDIDCLCVSSISANV---FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEINGIKFDL 754
Query: 123 LY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y A W+ E ++ Q S L N L R + R + FR
Sbjct: 755 QYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLH 812
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYTQWRWP 236
R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++ FF Y + W
Sbjct: 813 RIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADILCTFFNHYGNFNWG 872
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
+ I G P RN + M I T P +N + + S ++R ++DE +
Sbjct: 873 KDAVYDPIFHGK-------PPRNYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMK 925
Query: 297 RGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNYLRIDISAENADDL 343
R + +E + +W L + F ++Y +Y++I++ +
Sbjct: 926 RAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLA 980
Query: 344 R--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
+ + GWVESR L + R + +Q P F+
Sbjct: 981 KGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 176/441 (39%), Gaps = 100/441 (22%)
Query: 25 LMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV------------------------ 60
L T L + + ++ ++ ++++ +R+E L L Q+
Sbjct: 581 LSDTAALRQCMENLEVFPTEQDETTRKEALQLLRQILLDSDQANADQTRGRPTVMLVPVG 640
Query: 61 -HGPG-----ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMK 112
+G G +DID LC+G + FF Q L + E V L V +++
Sbjct: 641 SYGLGTWSRTSDIDCLCIG---SISPRIFFTLARQRLRKSGESGVRLLRKVKAKTGTMLE 697
Query: 113 FKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE-------QTVRSLNGCRVTDQIL 165
+ G+ DL Y + P +D D + + + QT+ L R +
Sbjct: 698 VEVMGIKCDLQYCQ-----APSVVDQWPDMLKRPPSDPAFSLPMQTLLKLKPARDLFYLQ 752
Query: 166 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPNAVPSM-- 221
R +P + FR + + ++ WAK RG+Y+ G+LGGI+ ++++ ++C+ L V S
Sbjct: 753 RSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVKVCKMLLRVGGVVSAVD 812
Query: 222 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP-----IITPAYPC 276
+++ FF Y+++ W N V V+DP + +YH P ++ P
Sbjct: 813 IITTFFDHYSRFDWQNDV-------------VFDPFFHKNLRYHRTPREAMCLLGWHSPT 859
Query: 277 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD-VDWDTLF-------------EPFT 322
+N++ S T++I+ E+C A + D W +L
Sbjct: 860 LNTALIASVPTVKII------SAELCHAATQLSGDGASWQSLLSIPDSSQDRNMTPSASK 913
Query: 323 FFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
F +Y++++ + I A R + GW+ESR L + I R L P F D
Sbjct: 914 FLGSYRSFVNLRIHYWGASLERGSRLVGWLESRCASLLVDINRRVPE-LSARIWPARFVD 972
Query: 381 KSKP--------LYCSYFMGL 393
P SY +GL
Sbjct: 973 SLTPEADETRGDYQGSYLIGL 993
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 142/334 (42%), Gaps = 35/334 (10%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LC+G + FF Q L + + + L V +++ + G+ DL
Sbjct: 666 SDVDCLCIG---TISSKTFFRMALQRLRKASDQGIRVLRKVLANTGTMLELQILGIKFDL 722
Query: 123 LY-ARLSLW-VIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
Y A S++ P +++ + + QT+ L R +LR +P + FR
Sbjct: 723 HYCAATSVFEKFPSVMNLPSNHPEFSLPVQTLAKLKPARDMYYLLRSIPDLAKFRVAFLM 782
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQ----LYPNAVPSMLVSRFFRVYTQWRWP 236
++ WA RG+Y G LGGI+ +L+ IC+ L + +++ FF YT + W
Sbjct: 783 IKAWASSRGIYGARFGLLGGIHITVLLVPICKQLATLSRVVSTTGILATFFSHYTNFDWE 842
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
V+L L R ++ + L+ PA +N++ ST T++ + E
Sbjct: 843 KQVVLDPFFHKELRYH-----RTSREPFCLLGWHAPA---LNTAMTASTPTVKSIATEIS 894
Query: 297 RGHEICEAMEKNEADVDWDTLFEPF--------TFFEAYKNYLRID--ISAENADDLRNW 346
+ + + ++ V WD + P F +K+Y+++D + R +
Sbjct: 895 KTNSLL-----SQPGVTWDAILGPVGAAVAGVQDFLRGFKSYVKVDARFWGSSPSSGRKF 949
Query: 347 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 380
GW+ESR + + + R +L PG F D
Sbjct: 950 LGWLESRCVAILVDMNRKAPALLP-RIWPGRFID 982
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 43/335 (12%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQML---TEMPEVTELHP------VPDAHVPV 110
VH +DID L +GP T FF Q L + P ++ H + + +
Sbjct: 793 VHTSSSDIDVLAIGPFSTT---TFFSLAIQRLRRASSSPLYSQEHQPKILRRISSSTGTM 849
Query: 111 MKFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQTVRSLNGCRVTDQIL 165
++ + DL Y S W P L + + + + T+ L R D +
Sbjct: 850 LELSLCQIKFDLQYCPAAHIASHW--PRILSTAPPGNAVWSLPALTLTKLKAARDLDYLR 907
Query: 166 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP-------NAV 218
R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+ +
Sbjct: 908 RTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYKALALGAGGVSGVG 967
Query: 219 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY-----HLMPIITPA 273
LV+ FF Y Q+ W ++ +E L++ + K+ Y M ++
Sbjct: 968 VEELVASFFEEYAQFDWEKDMVY---DEVCPWLRLKREKGGEKEVYRRTGREAMVVLGWF 1024
Query: 274 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE---PFTFFEAYKNY 330
P +N+S S ++R + DEF+R ++ + K E W + F YK+Y
Sbjct: 1025 GPGLNTSGQASVWSVRTLKDEFKRARDL---LVKGEVK-SWKEFLKGSGAEEFLTGYKSY 1080
Query: 331 LRIDISAENADDLR--NWKGWVESRLRQLTLKIER 363
+++D+ + + GW+ESR L + + R
Sbjct: 1081 VKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1115
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 164/387 (42%), Gaps = 56/387 (14%)
Query: 28 TRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPG-----ADIDTLCVGPRHATREED 82
R LE L+DV+L S+++ S + +G G +DID LC+GP + +
Sbjct: 615 VRALEVALKDVDLPASEDDTRSGPPFVVVPVGSYGLGVWTSSSDIDCLCIGPFSS---KT 671
Query: 83 FFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDI 138
FF Q L ++ + V +++ + G+ +DL Y A S+ W PE +
Sbjct: 672 FFALAVQRLKRAADIRIIRRVKANSGYMLELEVHGIKVDLQYCAAASIAERW--PEVMKR 729
Query: 139 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 198
+ QT+ L R + R +P + +R ++ WA+ RG+YS GFL
Sbjct: 730 PANDSAFALPFQTLAKLKPVRDLFYLRRSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFL 789
Query: 199 GGINWALLVARICQLYPNA----VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVW 254
GGI+ ++L+ IC+ + P+ +V FFR Y+ + W + V+
Sbjct: 790 GGIHISVLLVPICKALASGSETVSPTDIVVTFFRHYSNFDWKTSM-------------VF 836
Query: 255 DPRRNPKDKYHL-----MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 309
DP + +Y+ + +I P +N++ S T+ + E +R + + +E
Sbjct: 837 DPFFHKDLRYNRTFREPLCLIGWHAPALNTAPIASNPTVMTIAAEIERANRLL-----SE 891
Query: 310 ADVDWDTLF------------EPFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLR 355
W+++ F + +K Y++ID ++ + GW+ESR
Sbjct: 892 NGCTWNSVLGLQSAQEAGKSRGATEFLKEFKTYIKIDAHYWGPSQEKSGRFIGWLESRCV 951
Query: 356 QLTLKIERHTYNMLQCHPHPGDFSDKS 382
L + + R +++ P F D S
Sbjct: 952 MLLVDVNRKLQHLV-ARIWPSRFLDTS 977
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 146/366 (39%), Gaps = 55/366 (15%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LC+GP +FF Q L + + L V +++ + G+ +DL
Sbjct: 663 SDIDVLCIGP---FSTHNFFALASQRLRKAAGQGIRILRRVRANTGTMLEIEVDGIKMDL 719
Query: 123 LYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y + W P L + + QT+ L R D I R VP + FR
Sbjct: 720 QYCPATSVAERW--PHVLQTPASDPVWSLSAQTLSKLKAVRDVDYIRRSVPDLAAFRLAH 777
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY-----PNAVPSMLVSRFFRVYTQW 233
R ++ WAK RG+YS GFL GI ++L+AR+ +L P +V +L + FF Y +
Sbjct: 778 RFIKTWAKSRGIYSARFGFLSGIQISILLARVQKLLARESGPCSVEDLLAT-FFTHYAAF 836
Query: 234 RWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIITPAY--PCMNSSYNVSTST 287
W +DP R P + P+ Y P +N++ S +
Sbjct: 837 DWS-------------ARPAFDPLFHRHRLPYTRTPREPLAVLGYFPPSLNTAAAASVPS 883
Query: 288 LRIMMDEFQR-GHEICEAMEKNEADVDWD-----------TLFEPFTFFEAYKNYLRIDI 335
++ + EF+R G + + + D F A+++Y+R+D+
Sbjct: 884 VKTLAAEFRRAGAAFLSSSSSSSSSSSSDPHPARSWSSLAAPSAASDFLAAHRSYVRLDV 943
Query: 336 SAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCSY 389
R + GW+ESR L + + R L PG F ++ + Y
Sbjct: 944 QYWGLPRARGAQLLGWLESRCAALLVDLHRRAPG-LHARMWPGRFVEEEEEEERDFRGCY 1002
Query: 390 FMGLQR 395
+GL +
Sbjct: 1003 LIGLDK 1008
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 220
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 42/334 (12%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQML---TEMPEVTELHP-----VPDAHVPVM 111
VH +DID L +GP FF Q L + P + P + + ++
Sbjct: 727 VHTSSSDIDVLAIGPFSTN---TFFSLAIQRLRRASSSPLFSSYQPKILRRIYSSTGTML 783
Query: 112 KFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQTVRSLNGCRVTDQILR 166
+ + + DL Y S W P L + + + + T+ L R D + R
Sbjct: 784 ELSVNQIKFDLQYCPAAHIASNW--PRILSTAPPGNAVWSLPALTLTKLKAARDLDYLRR 841
Query: 167 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI------CQLYPNAVPS 220
VP + FRT R +R WAK RGVY+ G+LGGI ++++AR+ Q
Sbjct: 842 TVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARVYKALALTQGVTRVGVE 901
Query: 221 MLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 275
LV+ FF Y ++ W ++ + ++ G + RR ++ M ++ P
Sbjct: 902 ELVASFFEEYARFHWGRDMVYDEVCPWFRQKREKGGEKEVYRRTSREA---MVVLGWFGP 958
Query: 276 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----FFEAYKNYL 331
+N+S S ++R + +EF+R + + K E W E + F YK+Y+
Sbjct: 959 GLNTSGQASVWSVRTLKEEFERAR---DQLVKEEVR-SWKEFLEGSSAAEEFLTGYKSYV 1014
Query: 332 RIDISAENADDLR--NWKGWVESRLRQLTLKIER 363
++D+ R + GW+ESRL L + + R
Sbjct: 1015 KVDVQYWGLSPSRGAQFVGWLESRLVMLLVDLHR 1048
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 144/336 (42%), Gaps = 54/336 (16%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LC+GP + + FF Q L V L V +++ + +G+ +DL
Sbjct: 663 SDIDCLCIGPFSS---KTFFALAVQRLKRATTLGVRILRRVKANSGNMLELEVNGIKVDL 719
Query: 123 LY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y A S+ W PE + Q + L R + R +P + +R
Sbjct: 720 QYCAAASIAERW--PEVMKRPASDPAFALSFQALAKLKPVRDLFYLRRSLPDMVQYRMAH 777
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPN--AVPSMLVSRFFRVYTQWR 234
++ WA+ RG+YS GFLGGI+ ++L+ +C+ Y N P+ +V FF Y+++
Sbjct: 778 LFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCKAVAYENETVTPADIVVTFFHYYSEFD 837
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPCMNSSYNVSTSTLR 289
W N + V+DP + + +Y+ + +I P +N++ S T+
Sbjct: 838 WKNSM-------------VFDPFFHKELRYNRTFREPLCLIGWHAPALNTAPIASIPTVA 884
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLF--EPFT------------FFEAYKNYLRIDI 335
+ EF R + ++ D W L EP T F A+K Y++ID
Sbjct: 885 TISSEFGRAKRML-----SDDDCIWGKLLGIEPETALGSVQAPAATEFLHAFKTYIKIDA 939
Query: 336 SAENADDLRNWK--GWVESRLRQLTLKIERHTYNML 369
++ + GW+ESR L + I R ++L
Sbjct: 940 HYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHLL 975
>gi|76154117|gb|AAX25625.2| SJCHGC06256 protein [Schistosoma japonicum]
Length = 166
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 68/143 (47%), Gaps = 37/143 (25%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ--------- 59
LG T +S PT+ DL T++LE L +N++E+QEE R E L RL +
Sbjct: 21 LGETGALSFKKPTEQDLKDTQELEASLAQLNIFETQEEISQRREALVRLQEISNGWIRQK 80
Query: 60 ---------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLT 92
V+ GADID+L V PR TREE FF + +L
Sbjct: 81 ALEQNLPTHVANSTTGKIFTFGSYRLGVNFRGADIDSLLVVPRFITREE-FFSDFQTVLA 139
Query: 93 EMPEVTELHPVPDAHVPVMKFKF 115
E P V +LH V DA VPV+K KF
Sbjct: 140 ENPNVEDLHAVVDAFVPVLKMKF 162
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 180/438 (41%), Gaps = 70/438 (15%)
Query: 29 RKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPG-----ADIDTLCVGPRHATREEDF 83
+ LE L D SQ +A S ++ +G G +DID LC+G + + F
Sbjct: 618 KALEHALLDATSSVSQGDARSGPVLILVPVGSYGLGVWTSSSDIDCLCIG---SISPKIF 674
Query: 84 FGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLD 137
F Q L + L V +++ + G+ +DL Y A S+ W PE +
Sbjct: 675 FALAVQRLRRAVTGGIRILRRVKANSGYMLELEVHGIKMDLQYCAAASIAERW--PEVMK 732
Query: 138 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF 197
QT+ L R + R +P + +R ++ WA+ RG+YS GF
Sbjct: 733 RPASDPAFALPFQTLAKLKPVRDLFYLRRSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGF 792
Query: 198 LGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQV 253
LGGI+ ++L+A +C++ N ++ ++ FF+ Y ++ W + V
Sbjct: 793 LGGIHISVLLAPLCKMLANDGATVSTADIIFTFFQHYARFSWKTAL-------------V 839
Query: 254 WDPRRNPKDKYHLM---PIITPAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN 308
+DP + +Y+ P+ + P +N++ N S T+ + EF+R +
Sbjct: 840 FDPFFHKDLRYNRTFREPLCLLGWHAPALNTAVNASVPTVDAIAAEFERAERLLSV---- 895
Query: 309 EADVDWDTLF--EPFT------------FFEAYKNYLRIDISAENADDLRNWK--GWVES 352
+ W L EP + F + YK+Y++ID ++ + GW+ES
Sbjct: 896 -ENFSWSNLLGVEPDSPPSSLSGPGATEFLQNYKSYIKIDAHYWGPSQEKSGRFIGWLES 954
Query: 353 RLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-------YCSYFMGLQRKQGVPV---G 402
R L + ++R N + P F D + + + Y +GL R P
Sbjct: 955 RCVMLLVDLDRKVKN-IHARIWPARFLDMASSVEGPGTEYHGHYLIGLSRNGEEPNKDDA 1013
Query: 403 EGEQFDIRLTVKEFKQAV 420
+ Q ++ ++EF+ +
Sbjct: 1014 KATQVALQAALQEFEARI 1031
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 145/349 (41%), Gaps = 56/349 (16%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEM--PEVTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LC+G + FF Q L + P V L V +++ + GV DL
Sbjct: 648 SDIDCLCIG---SISPRVFFILARQRLRKSGNPGVRLLRKVKAKTGTMLEVEILGVKCDL 704
Query: 123 LYAR----LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y + + W P+ L + QT+ L R + R VP + FR +
Sbjct: 705 QYCQAPSVVEQW--PDMLKRPPSDPAFSLPMQTLLKLKPARDLFYLQRSVPDLAQFRMSF 762
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPNAVPSM--LVSRFFRVYTQWR 234
+ ++ WAK RG+Y+ G+LGGI+ ++++ ++C+ L+ V S +++ FF Y+Q
Sbjct: 763 QAIKTWAKARGIYAAKFGYLGGIHLSVMLVKVCKMLLHDGGVVSTADIITTFFDHYSQLD 822
Query: 235 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP-----IITPAYPCMNSSYNVSTSTLR 289
W + V+DP + KYH P ++ P +N++ S T +
Sbjct: 823 WQRDM-------------VFDPFFHKNLKYHRTPREAMCLLGWHSPTLNTALTASVPTTK 869
Query: 290 IMMDEFQRGHEICEAMEKNEAD-VDWDTLFE-------------PFTFFEAYKNYLRIDI 335
I+ E+C+A + D W +L F ++++++ + +
Sbjct: 870 II------SAELCQATTQLSRDGTSWQSLLSIPDSSHSKNMTPGASNFLGSFRSFINLRV 923
Query: 336 SAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 382
A R + GW+ESR L + + + L P F D S
Sbjct: 924 HYWGASLERGSRLVGWLESRCASLLVDVNKRVPE-LSARIWPARFVDSS 971
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 37/148 (25%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ---------- 59
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+
Sbjct: 70 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWISDVS 129
Query: 60 --------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE 93
VH GADID LCV PRH R DFF + L
Sbjct: 130 ESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVER-SDFFQSFFEKLKH 188
Query: 94 MPEVTELHPVPDAHVPVMKFKFSGVSID 121
+ L V DA VPV+KF+F G+ ++
Sbjct: 189 QDGIRNLRAVEDAFVPVIKFEFDGIEVN 216
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 259 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 297
NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 254
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 150/368 (40%), Gaps = 57/368 (15%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LCVG FF Q L + + L V +++ + G+ DL
Sbjct: 675 SDVDCLCVG---NISSRTFFALAIQKLRKASANGIKILRRVKANSGTMLELEIRGIKFDL 731
Query: 123 LYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
Y + PE + Q++ L R + R +P + +R
Sbjct: 732 QYCSAAAIAQGYPEVFKRPSSDPIFALPLQSLAKLKPARDLFYLRRSIPDMTKYRVAHLV 791
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN----AVPSMLVSRFFRVYTQWRWP 236
++ WAK RG+Y+ G LGGI+ ++ +C+ N A + +++ FF Y+ + W
Sbjct: 792 IKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAASTADVLTSFFHHYSTFDWA 851
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMNSSYNVSTSTLRIM 291
V V+DP + + +YH P+ + P +N++ + S ST+ +
Sbjct: 852 TGV-------------VYDPFYHTELRYHRTFREPLCLLGWHGPSLNTASSASISTVNAL 898
Query: 292 MDEFQRGHEICE----------AMEKNEADVDWDTLFEPFT--FFEAYKNYLRIDIS--A 337
EF R + +E++E+ +L E F ++Y+ Y++I
Sbjct: 899 ASEFTRAATLLSQEGMTWSKFLGVEQSESP---SSLLEKGAADFLDSYRTYIKISARYWG 955
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP----------LYC 387
+ R + GW+ESRL + + I R + ++ P F+D+ + L
Sbjct: 956 SSQQKGRKYLGWLESRLISILVDISRKSPGIVP-RIWPARFTDEEQSSSNTDAENPELTA 1014
Query: 388 SYFMGLQR 395
Y +GL++
Sbjct: 1015 CYLIGLKK 1022
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 169/415 (40%), Gaps = 72/415 (17%)
Query: 27 RTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV----HGPG-----ADIDTLCVGPRHA 77
RTRK L + L+E+++ V + L V +G G +DID LC+G +
Sbjct: 602 RTRKQALGLLRMILWENEQTNVEQSRGQPALVLVPVGSYGLGVWSKSSDIDCLCIG---S 658
Query: 78 TREEDFFG-ELHQMLTEMPE-VTELHPVPDAHVPVMKFKFSGVSIDLLYARLS----LWV 131
FF H++ + E V L V +++ + G+ DL Y + + W
Sbjct: 659 ISPRVFFTLARHRLRKSVGEGVRILRQVKAKTGTMLEIEVLGLRCDLQYCQAASVANQW- 717
Query: 132 IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVY 191
P L + QT+ L R I R VP + FR + ++ WAK G+Y
Sbjct: 718 -PNLLKRPPSDAAFSLPTQTLLKLKPARDMYYIARSVPDLAQFRVCYQVIKTWAKANGIY 776
Query: 192 SNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEG 247
+ G+LGG++ ++++ R+C++ + + ++ +++ FF Y + W N +
Sbjct: 777 AAKFGYLGGVHLSVMLVRVCKMLLHGMGTVSTADVIATFFDHYAHFDWKNDI-------- 828
Query: 248 SLGLQVWDPRRNPKDKYHLMP-----IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC 302
V+DP + + +YH P ++ P +N++ S T++I+ E +
Sbjct: 829 -----VFDPFFHKQLRYHRTPREAMCLLGWHSPTLNTALIASVPTVKIISTELR------ 877
Query: 303 EAMEKNEADVDWDTLFE-------------PFTFFEAYKNY--LRIDISAENADDLRNWK 347
+A K W ++ +F ++K + LRI + +
Sbjct: 878 QANAKFTEGATWQSILSAPGMIAEKDLSQGAASFLSSFKTFVNLRIHYWGGSLERGSRLV 937
Query: 348 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP--------LYCSYFMGLQ 394
GW+ESR L + I R L P F D + P SY +GL+
Sbjct: 938 GWLESRCASLLVDINRKVPE-LAPRIWPARFVDAATPNSQCQQSEYQGSYLVGLK 991
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 158/408 (38%), Gaps = 83/408 (20%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LCVG + FF Q L + + L V +++ + G+ DL
Sbjct: 666 SDIDCLCVG---NISSKTFFSLAVQKLKKASTSGIKILRRVMANTGTMLELEIHGIRFDL 722
Query: 123 LYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
Y + P+ L + + Q++ L R + R +P + +R
Sbjct: 723 QYCAAAAIAQGYPDVLKRPASDPVFSLPVQSIAKLKPARDLVYLRRSIPDMTKYRVAHLF 782
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN----AVPSMLVSRFFRVYTQWRWP 236
++ WA+ RG+YS G LGGI+ L+ +C+ N A + +++ FF Y+ + W
Sbjct: 783 IKAWAQSRGLYSAKFGLLGGIHITSLLVPVCKALANEPEAASTADILTSFFYHYSTFDWE 842
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMNSSYNVSTSTLRIM 291
V V+DP + KYH P+ + P +N++ + S ST+ +
Sbjct: 843 TGV-------------VFDPFYHRDLKYHRTFREPLCLLGWHGPSLNTASSASISTVNAL 889
Query: 292 MDEFQRGHEICEA--------------------MEKNEADVDWDTLFEPFTFFEAYKNYL 331
E R + +EK AD F ++Y+ Y+
Sbjct: 890 ASELTRAAALLSQDGMTWSKFLGLELSGTPSSLIEKGAAD-----------FLDSYQTYI 938
Query: 332 RIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---------SD 380
+I + R + GW+ESR + + I R T ++ P F SD
Sbjct: 939 KISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLGLVP-RIWPARFIDEDQTSGTSD 997
Query: 381 KSKPLYCSYFMGLQRKQGV--------PVGEGEQFDIRLTVKEFKQAV 420
++ L Y +GL+ + EG +IR+ ++EF+ V
Sbjct: 998 ENSELSACYLIGLKWVDSIADKSATSQAAAEG---NIRVILQEFESRV 1042
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 47/337 (13%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE-----------MPEVTELHPVPDAHV 108
VH +DID L +GP T FF Q L P++ L + +
Sbjct: 755 VHTSSSDIDVLAIGPFSTT---TFFSLAIQRLRRAASSPLYSQEYQPKI--LRRISSSTG 809
Query: 109 PVMKFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQTVRSLNGCRVTDQ 163
+++ + DL Y S W P L + + + + T+ L R D
Sbjct: 810 TMLELSLCQIKFDLQYCPAAHIASHW--PRILSTAPPGNAVWSLPALTLTKLKAARDLDY 867
Query: 164 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP-------N 216
+ R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+ +
Sbjct: 868 LRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYKALALGAGGVSG 927
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY-----HLMPIIT 271
LV+ FF Y Q+ W ++ +E + + K+ Y M ++
Sbjct: 928 VGVEELVASFFEEYAQFDWEKDMVY---DEVCPWFRQKREKGGEKEVYKRTGREAMVVLG 984
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE---PFTFFEAYK 328
P +N+S S ++R + +EF+R ++ + K E W + F YK
Sbjct: 985 WFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVK-SWKEFLKGSGAEEFLTGYK 1040
Query: 329 NYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 363
+Y+++D+ + + GW+ESR L + + R
Sbjct: 1041 SYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1077
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 147/347 (42%), Gaps = 57/347 (16%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LCVG + + FF Q L + E V L V A +++ + + V DL
Sbjct: 696 SDVDCLCVG---SISSKVFFELTLQRLKKGAEWDVKILRKVKAATGTMLELEINSVKFDL 752
Query: 123 LY----ARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 177
Y A W+ +P + + S L + + L R + R VP FR
Sbjct: 753 QYCPAAAVAERWLEVPH---LPRSSPLFDLALLPLMKLQPYRDQAYLQRTVPNPATFRLL 809
Query: 178 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQW 233
R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P+ ++ FF Y +
Sbjct: 810 HRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAADILCTFFNYYGNF 869
Query: 234 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDK-YHLMP-----IITPAYPCMNSSYNVSTST 287
W V+ +DP + K YH P I+T P MN + + S +
Sbjct: 870 NWKEGVM-------------YDPSFHKKPPLYHRTPQEGMVILTLHAPVMNVARSASIPS 916
Query: 288 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT-------------FFEAYKNYLRID 334
R ++DE +R + +E + +W L F +Y +Y++I+
Sbjct: 917 TRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDEFLRSYNSYIKIN 971
Query: 335 ISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
+ + + GW+ESR L + R + +Q P F+
Sbjct: 972 VQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFT 1017
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 47/337 (13%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTE-----------MPEVTELHPVPDAHV 108
VH +DID L +GP T FF Q L P++ L + +
Sbjct: 754 VHTSSSDIDVLAIGPFSTT---TFFSLAIQRLRRAASSPLYSQEYQPKI--LRRISSSTG 808
Query: 109 PVMKFKFSGVSIDLLYARL----SLWVIPEDLDISQ-DSILQNADEQTVRSLNGCRVTDQ 163
+++ + DL Y S W P L + + + + T+ L R D
Sbjct: 809 TMLELSLCQIKFDLQYCPAAHIASHW--PRILSTAPPGNAVWSLPALTLTKLKAARDLDY 866
Query: 164 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP-------N 216
+ R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+ +
Sbjct: 867 LRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARVYKALALGAGGVSG 926
Query: 217 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY-----HLMPIIT 271
LV+ FF Y Q+ W ++ +E + + K+ Y M ++
Sbjct: 927 VGVEELVASFFEEYAQFDWEKDMVY---DEVCPWFRQKREKGGEKEVYKRTGREAMVVLG 983
Query: 272 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE---PFTFFEAYK 328
P +N+S S ++R + +EF+R ++ + K E W + F YK
Sbjct: 984 WFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVK-SWKEFLKGSGAEEFLTGYK 1039
Query: 329 NYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 363
+Y+++D+ + + GW+ESR L + + R
Sbjct: 1040 SYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1076
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 129/338 (38%), Gaps = 40/338 (11%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
GAD+D + P D ++ +P+ T + V A VP ++ + + +DL+
Sbjct: 634 GADLDLVAALPGGV----DLADVRARVTAALPDGTRVRQVTGARVPGLRLRTGDLDVDLV 689
Query: 124 YARLSLWVIPEDLDISQDSILQNA--DEQTVRSLNGCRVTDQILRLVPKIQNFRTTL-RC 180
V LD + ++ + A D+ +L+ D + V T L R
Sbjct: 690 V------VATGTLDPGE-AVARRAELDQAAAIALSAVSDADAVRAAVGDHHTAFTRLARQ 742
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WA RG+ S G L G+ W++L AR + ++ L+ FF + W W +PV
Sbjct: 743 VKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLLRHFFGTWAAWDWRDPVG 802
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
L G P LM TP P N + V ++ DE R
Sbjct: 803 LAPTGTG------------PHTPVVLM---TPTDPVRNCTGQVGAGFRDLLTDELYRAWT 847
Query: 301 ICEAMEKNEADVD---WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 357
I E AD D W L P + + + + + A++ G V RLR L
Sbjct: 848 ILE----TAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPAEEFEETSGRVRGRLRAL 903
Query: 358 TLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 395
+E P P F ++ P + Y +GL R
Sbjct: 904 LTALEDAGAADAYAWPRP--F--ETGPGFVRYAIGLGR 937
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 154/373 (41%), Gaps = 60/373 (16%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LCVG +TR FF Q L + V L V +++ + G+ DL
Sbjct: 662 SDIDCLCVG-NISTRV--FFNLAVQKLRKASAEGVKILRRVMANTGTMLELEIRGIKFDL 718
Query: 123 LYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
Y + P+ L + QT+ L R + R +P + +R
Sbjct: 719 QYCAAAAIAQGYPDVLKRPSSDPVFALPLQTLAKLKPARDLFYLRRSIPDMTKYRVAHLF 778
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWP 236
++ WA+ RG+Y+ G LGGI+ + ++ IC+ N ++ +++ FF+ Y+++ W
Sbjct: 779 IKAWAQSRGLYAAKYGMLGGIHISSMLVPICKALANESEAVSTADILTTFFQHYSKFNW- 837
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMNSSYNVSTSTLRIM 291
E G V+DP + KYH P+ + P +N++ S ST+ +
Sbjct: 838 --------ETG----MVFDPFYHLGLKYHRTFREPLCLLGWHGPSLNAASTASISTVNAL 885
Query: 292 MDEFQRGHEICEAMEKNEADVDWDTLF------EPFT--------FFEAYKNYLRIDIS- 336
E R + ++ DV W P T F +Y++Y++I
Sbjct: 886 TSELVRAAALF-----HQQDVTWSRFLGLEQSATPLTLIEKGAADFLNSYRSYIKISARY 940
Query: 337 -AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---------DKSKPLY 386
+ R + GW+ESR + + I R + +++ P F+ D++ L
Sbjct: 941 WGSSQQKGRKYLGWLESRCISILVDISRKSPSLIP-RMWPARFADEDPTNSTYDQTSELN 999
Query: 387 CSYFMGLQRKQGV 399
Y +GL+ + V
Sbjct: 1000 ACYLVGLKWDENV 1012
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 266 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 325
MPI+ P P + N++ T + + +E RG+ + + E D +W LF PF +
Sbjct: 92 FMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYAT 149
Query: 326 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
Y+ +LRI + A +++LR+W GWV+SR R L LK+E
Sbjct: 150 KYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE 186
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 142/365 (38%), Gaps = 73/365 (20%)
Query: 64 GADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
G+DID LC+G + FF Q L + D V V++ K + +L
Sbjct: 673 GSDIDCLCIG---TISSKTFFKLARQRLVK---------AHDQGVRVLR-KVEANTGTML 719
Query: 124 YARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRF 183
+P I SIL ++R L R I R +P + FR RC++
Sbjct: 720 ELWSEFAGLPASDPIFNLSIL------SLRKLKPYRDLLYIQRTLPSLSAFRLAYRCIKL 773
Query: 184 WAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPV 239
WA RRG+YS G+LGG++ L+++ + + S+ LVS FF + + W N +
Sbjct: 774 WAVRRGIYSAKFGYLGGVHITLMLSWAAKCLAHDSGSITAPDLVSSFFHHFAHFNWTNDM 833
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMNSSYNVSTSTLRIMMDE 294
+ A K +YH P++ + P N ++ + L ++ E
Sbjct: 834 MYDAF------------FHKQKPRYHRSAREPMVVLGFHAPNSNIAHTSTLPGLHTLVSE 881
Query: 295 FQRGHEICEAMEKNEADVDWDTLF-----------EPFT----FFEAYKNYLRIDIS--A 337
+ E ++ + W F P + F A+ +Y++IDI
Sbjct: 882 MKAADEAL-----SDPSMTWKKFFGSTDNSPQAALSPISGASDFLSAHSSYVKIDIQFWG 936
Query: 338 ENADDLRNWKGWVESRLRQLTLKIERHTYNM---LQCHPHPGDFSD----KSKPLYCSYF 390
++ GWVESR L + I Y M L P F+D + + Y
Sbjct: 937 RTLAKGKSLVGWVESRCLSLVVDI----YKMLPDLAVRIWPARFTDSDTIEGGDYHGCYL 992
Query: 391 MGLQR 395
+GL R
Sbjct: 993 IGLSR 997
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 50/237 (21%)
Query: 176 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP-----------NAVPSMLVS 224
T R ++ WA+ RG+Y+ G+LGGI A+L+AR+ +L +AVP +L +
Sbjct: 52 TAYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILAT 111
Query: 225 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY--PCMNSSYN 282
FFR Y + W + G + P + P++ Y P +N+S +
Sbjct: 112 -FFRDYAGFDWATQMAFDPFFHG---------HKAPHVRTAGEPLVILGYHRPQLNTSMS 161
Query: 283 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE-------------------PFTF 323
S S++R++ E +R + A + WD TF
Sbjct: 162 ASVSSVRVLAAELRRADRLLSA-----GRISWDAFLGGGGDEGDSSTIVAGRLLSGAATF 216
Query: 324 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 378
AY+ Y++ID+ R ++ GW+ESR L + + R L H PG F
Sbjct: 217 VCAYRTYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVARRL-PQLNTHIWPGRF 272
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 140/354 (39%), Gaps = 46/354 (12%)
Query: 67 IDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLY 124
+D LC+G + FF Q L + + + L + ++K + G+ L Y
Sbjct: 675 VDCLCIG---TMSSKTFFRMALQRLRKASDGGMRILRKASTSTGTMLKLQILGIKFTLHY 731
Query: 125 ARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
+ V P +++ D QT+ L R +LR +P + FR ++
Sbjct: 732 CAATSIVEKYPRVMNLPSDHPEFALPVQTLAKLKPARDLYYLLRSIPDLAKFRVAFLFIK 791
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS------RFFRVYTQWRWP 236
WA RG+Y G L GI+ +L+ IC+ A SM VS FF Y W
Sbjct: 792 AWASSRGIYGARFGLLSGIHITVLLVPICKQL--AAISMAVSTTDILTTFFSHYADLEWE 849
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
V+L L R ++ + L+ PA +N++ ST T++ + E
Sbjct: 850 THVVLDPFYHRELRYH-----RTSREPFCLLGWHAPA---LNTAMAASTPTVKSIAAELS 901
Query: 297 RGHEICEAMEKNEADVDWDTLFEPFT--------FFEAYKNYLRID--ISAENADDLRNW 346
+ + + ++ W T+ P + F + +K+Y++ID + R +
Sbjct: 902 KANSLL-----SQPGATWGTILGPASTAASGVRDFLQNFKSYVKIDARFWGPSPSSGRKF 956
Query: 347 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------SKPLYCSYFMGL 393
W+ESR + + R ++L PG F D+ +C Y +GL
Sbjct: 957 LSWLESRCVAVLADMTRKAPSLLP-RLWPGRFIDRPNTDTVTGSEYHCFYLIGL 1009
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 147/340 (43%), Gaps = 45/340 (13%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+D+D LCVGP FF Q L + + V L V A + + + GV DL
Sbjct: 697 SDVDCLCVGP---VSSRTFFELAMQRLRKGADSGVKILRKVKAATGTMWELEVRGVKFDL 753
Query: 123 LYARLSLWVIPEDLDISQ----DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y V L++S D + A V+ L R + R + FR
Sbjct: 754 QYCPAGA-VAERWLEVSHLPRADPLFDLAYLSLVK-LQPHRDQTYLQRTIQNPAMFRLLH 811
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYTQWRWP 236
R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S+ ++ FF Y + W
Sbjct: 812 RVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTASVADILRTFFNHYADFYWM 871
Query: 237 NPVLLCAIEEGSLGLQVWDPR--RNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 294
++ I PR R+P++ M I+T YP MN + S S++R ++DE
Sbjct: 872 EGMVYDMI------FHRKQPRYNRSPREG---MVILTLHYPIMNVARTASISSMRTIVDE 922
Query: 295 FQRGHEICEAMEKNEADVDWDTLF-------EPFT------FFEAYKNYLRIDISAENAD 341
R + +E + W +L +P F ++Y +Y++I++
Sbjct: 923 MDRADTLI-----SEGRLRWTSLVGITPQAGQPTLSNSADEFLKSYNSYIKINVQYWGLS 977
Query: 342 DLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
+ + GW+ESR L I R + LQ P F+
Sbjct: 978 LAKGSSLIGWLESRCLFLLADIHRKLPD-LQTRIWPARFT 1016
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 34 YLRDVNLYESQEEAVSREEVLGRLDQVHGPGA------DIDTLCVGPRHATREEDFFGEL 87
YL+ + S+ E +R+++ L G D+ L + + DFF
Sbjct: 17 YLQTQGVIVSETEKQTRQDIECILSPFGSFGLGGYIKNDVVELALVCPYQIHRSDFFKFF 76
Query: 88 HQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 147
++L E + + + +++ + RL L + ++ +S+LQ+
Sbjct: 77 PELLKEQSLI------------------NNIEVNISFIRLKLERVTHRINFLDNSLLQDM 118
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQN---FRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 204
D+ ++ +++G R+ +Q + K N F+ +L+C+++WA +RG+Y+ G+L
Sbjct: 119 DDASLATMDGPRL-NQFNKSQIKPSNVRLFQVSLQCIKYWAIQRGLYNAEIGYLNETACT 177
Query: 205 LLVAR---ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 261
LL+ + Q ++++ FF+++++W W PV+L G ++
Sbjct: 178 LLLIKTFMFIQSKEKLSITIILQNFFQMWSKWPWKTPVILTNHIPDKNGNKLEYSSITGS 237
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
K +MPII+P YP + + V+ T + + EF+RG+
Sbjct: 238 QK-AMMPIISPCYPVYSVTPYVTKLTQKTIQLEFERGNH 275
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSG 117
V P +D+D L +GP + FF Q L + + L V A +++ + +G
Sbjct: 688 VWSPSSDVDCLSIGP---ISSKIFFAIAEQRLRRAADSGIRILRKVKAATGTMIELEVNG 744
Query: 118 VSIDLLY---ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 174
+ DL Y AR+ L D I + Q + L R D I R +P + F
Sbjct: 745 IKCDLQYCPAARVVEGWQRISLSPPDDPIF-DLSYQALTKLQAFRDLDYIRRSIPDLAAF 803
Query: 175 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV---PSMLVSRFFRVYT 231
RT R + WAK RGVY + G+LGGI+ ++++R+ +L+ V + ++ RFF+ Y
Sbjct: 804 RTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSRVFKLFCGEVRVTSTDMIYRFFQYYA 863
Query: 232 QWRWPNPVLL 241
+ W + +
Sbjct: 864 DFDWEHKTVF 873
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 157/380 (41%), Gaps = 54/380 (14%)
Query: 20 PTDDDLMRTRKLEKYLRDVNLY-------ESQEEAVSREEVLGRLDQVHGPG-----ADI 67
P+ +D + + KYL+ + L+ E+ E S + +G G +D+
Sbjct: 640 PSPEDAEKRKAAFKYLKHLILHGSLPESGETHETGRSNFSFIVTAVGSYGLGVWTNSSDV 699
Query: 68 DTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLYA 125
D LCVGP +T FF Q L + + V L V A + + + +GV DL Y
Sbjct: 700 DCLCVGPVSSTT---FFELAMQRLRKGADSGVKILRKVKAATGTMWELEVNGVKFDLQYC 756
Query: 126 RLSLWVIPEDLDISQ----DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 181
V L++S D + A V+ L R + R + FR R +
Sbjct: 757 PAGA-VAERWLEVSHLPRADPLFDLAYLSLVK-LQPYRDQTYLQRTIKNPAMFRLLHRVI 814
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYTQWRWPNPV 239
+ WAK RG+YS+ G+LGGI+ L+++R+ +L P S+ ++ FF Y + W +
Sbjct: 815 KAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTTSVADILRTFFNHYADFYWMEGM 874
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+ + PR N + M I+T YP MN + S S++R ++DE R
Sbjct: 875 VY------DMNFHRKQPRYN-RSPRECMVILTLHYPIMNVARTASISSMRTIVDEMNRA- 926
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
DTL + + Y + ++ ++ GW+ESR L
Sbjct: 927 ---------------DTLISEGRYIKINVQYWGLSLAKGSS-----LIGWLESRCLLLLA 966
Query: 360 KIERHTYNMLQCHPHPGDFS 379
I R + LQ P F+
Sbjct: 967 DIHRKLPD-LQTRIWPARFT 985
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 131/346 (37%), Gaps = 42/346 (12%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
PGAD+D + P D Q+ + +PE + + V VP ++ G+ DL
Sbjct: 604 PGADLDLVAALPGPI----DLDAVEVQVRSALPEASTVRRVEAIRVPCLELCAVGLDADL 659
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV----------PKIQ 172
V PE + + E +L+ D +L V + +
Sbjct: 660 TLVDAGA-VRPEHAVARRLEL----GEAAAMALSAVTDADALLEAVDAASAPSAAPRRRE 714
Query: 173 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQ 232
F R ++ WA+ +G+ + G L GI W +L AR+ P+ P L+SRFF +
Sbjct: 715 AFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDAPDLEPGPLLSRFFGAWAA 774
Query: 233 WRWPNPVLL--CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRI 290
W + P+ L A G+ G DP R I TP P + S V + L
Sbjct: 775 WDFRRPIALDPSAPAVGTPG----DPVR----------IATPTAPVRSCSDTVGAAALAT 820
Query: 291 MMDEFQRGHEICE-AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
+ DE E E A+ + L P + + I + A + + + GW
Sbjct: 821 LSDELYSAWEAVESALAAGRDPL--PDLLAPPPLHRRHAAWAVITVEAPEPEGVASGLGW 878
Query: 350 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 395
V R+R L ER L+ PH D P + +GL +
Sbjct: 879 VRGRIRALLSSFERAGVGDLRAWPHAFD----RGPRLARHAIGLGK 920
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 143/342 (41%), Gaps = 37/342 (10%)
Query: 45 EEAVSREEVLGRLDQV-------HGPGADIDTLCVG---PRH---ATREEDFFGELHQML 91
E A R +V+ +L+ V H +DID L VG P+ R Q
Sbjct: 600 ERATPRPDVVLKLEAVGSYALGVHTCESDIDCLAVGNISPQTFWLLARSRLLAQAKQQTG 659
Query: 92 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-----IPEDLDISQDSILQN 146
T V V DA V +M+ + G+ IDL Y V IPE I DS L
Sbjct: 660 TGTTVVKLRRFVKDAAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPE---IPVDSPLFA 716
Query: 147 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
++ +L+ R + R++P + F R ++ + RRG+ G+LGG + LL
Sbjct: 717 LPASSLVTLSAYRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLL 776
Query: 207 VARICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD--PRRNPK 261
+ R+ P++ LV F R Y W W + ++G + +R P
Sbjct: 777 LTRVAITLPHSAGRSAPHLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAYKRVVQREP- 835
Query: 262 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 321
M +++ + P N + N S +++ + Q + ++ DV +
Sbjct: 836 -----MAVLSISKPQKNIASNASWNSVASLSHGLQTANATLQS-GGTWLDVCGTNPLK-- 887
Query: 322 TFFEAYKNYLRIDISAENADDL--RNWKGWVESRLRQLTLKI 361
+F + Y+++++I++ D + R GW+ES++ L +++
Sbjct: 888 SFIDEYRSFVKIEVHYWGGDCMQGRALMGWLESKIVSLLVQL 929
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 143/338 (42%), Gaps = 41/338 (12%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LCVG A FF + Q L + V + V A +++ + +G+ DL
Sbjct: 698 SDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDL 754
Query: 123 LY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y A W+ E ++ Q S L N L R + R + FR
Sbjct: 755 QYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLH 812
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYTQWRWP 236
R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++ FF Y + W
Sbjct: 813 RIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADILCTFFNHYGNFNWE 872
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
+ I P RN + M I T P +N + + S ++R ++DE +
Sbjct: 873 KDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMK 925
Query: 297 RGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNYLRIDISAENADDL 343
R + +E + +W L + F ++Y +Y++I++ +
Sbjct: 926 RAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLA 980
Query: 344 R--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
+ + GWVESR L + R + +Q P F+
Sbjct: 981 KGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 143/338 (42%), Gaps = 41/338 (12%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDL 122
+DID LCVG A FF + Q L + V + V A +++ + +G+ DL
Sbjct: 698 SDIDCLCVGSISANV---FFELIIQRLRNRIDLGVKIIRRVKPAFGTMLELEVNGIKFDL 754
Query: 123 LY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 178
Y A W+ E ++ Q S L N L R + R + FR
Sbjct: 755 QYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQRTIQNPATFRLLH 812
Query: 179 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYTQWRWP 236
R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++ FF Y + W
Sbjct: 813 RIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADILCTFFNHYGNFNWE 872
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 296
+ I P RN + M I T P +N + + S ++R ++DE +
Sbjct: 873 KDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARSTSIPSMRKIVDEMK 925
Query: 297 RGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNYLRIDISAENADDL 343
R + +E + +W L + F ++Y +Y++I++ +
Sbjct: 926 RAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSYIKINVQYWSLSLA 980
Query: 344 R--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 379
+ + GWVESR L + R + +Q P F+
Sbjct: 981 KGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
Length = 665
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 151/404 (37%), Gaps = 118/404 (29%)
Query: 65 ADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTEL--HPVPDAHVPVMKFKFSGVSIDL 122
+DID L + EDFF + L PEV + +P A +P++KF+F D+
Sbjct: 131 SDIDVLLSSFKFLLSREDFFSKFSAYLKS-PEVGAIIHQEIPQAQIPIIKFEFMSKQFDV 189
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQT-------------VRSLNGCRVTDQILRLVP 169
LY + + P ISQ Q +Q V S G + +
Sbjct: 190 LYCSM---LTP----ISQHQRCQLEKDQYFFEFSNVVQEKVDVFSFRGWSNCQYMYERIK 242
Query: 170 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL---------------- 213
+ F L+ ++ WAK++G+Y G+L GI+ +++ ++ ++
Sbjct: 243 DKEAFGWGLKIIKAWAKKKGLYGFNFGYLNGISLIIMLGKVDKMIRRERFQSDYCDDTLS 302
Query: 214 ----------YPNAVPSM----------LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQV 253
PN LV++FF VY++W P+ S+ +
Sbjct: 303 RNVNNQLSFTIPNRTLKSNNKIEDRVCELVTKFFEVYSKWDSKQPIFFQDNNSWSMDQDL 362
Query: 254 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 313
+ + PI+TP P +++ ++TS+L +M++ Q +C ++K + +D
Sbjct: 363 YSVCLK-----EVFPIVTPERPYKCTTHQINTSSLNHIMEQLQTAQNLCILIQKRQLILD 417
Query: 314 ---------------------------------WDTLFEPFTFFEAYKNYLRID------ 334
W LF P+ FF + +L+I+
Sbjct: 418 LVKYQNDNAFDKFGNPKKDNYNLSILKEFGQVTWKDLFNPYQFFTQHTIFLQIEVMTDVN 477
Query: 335 ISAENADDL---------------RNWKGWVESRLRQLTLKIER 363
IS N D++ +KG ESR + L L +E+
Sbjct: 478 ISQYNYDNVPDDPIGQYEVVLKHHHEYKGLFESRFKLLQLMMEQ 521
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 350 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 405
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 406 QFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 446
D+ ++ F +QA ++ L++ GM+I HV ++ L +++
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHVKKKQLHHYL 164
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLY----PNAVPSMLVSRFFRVYTQWRWP 236
++ WAK RG+YS+ G LG +N ++++ IC+L P+A + +++ FF Y + W
Sbjct: 11 LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70
Query: 237 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPCMNSSYNVSTSTLRIM 291
++L DP + KYH M ++ P N++ N + ST+ I+
Sbjct: 71 TNMVL-------------DPLFHGTVKYHRTQRESMCLLGWHTPSRNTALNATASTIHIL 117
Query: 292 MDEFQRGHEICEAMEKNEADVDWDTLFE------PF---------TFFEAYKNYLRIDIS 336
E R ++ ++ V+WDT PF F +++K Y++++ S
Sbjct: 118 SAEIMRASDLL-----SQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNAS 172
Query: 337 AENADDLRN--WKGWVESRLRQLTLKIE 362
+ + GW+ESR + + ++
Sbjct: 173 YLGCSPRKGKRFVGWLESRCLMVLVDLQ 200
>gi|449673865|ref|XP_004208051.1| PREDICTED: poly(A) polymerase alpha-like, partial [Hydra
magnipapillata]
Length = 144
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 37/130 (28%)
Query: 7 QRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ------- 59
++ GIT PI+L+GP + D T+ LE+ L+D ++E+QE+ R VL +L++
Sbjct: 15 KQYGITSPINLSGPKEIDEELTKSLEETLKDYGVFETQEQIQHRMVVLEKLNKLALEWIV 74
Query: 60 -----------------------------VHGPGADIDTLCVGPRHATREEDFFGELHQM 90
VH GADIDTL V PRH R DFFG ++
Sbjct: 75 KTSIAKNMPESVANSVGGKIFTFGSFRLGVHTKGADIDTLLVAPRHIER-ADFFGSFYEF 133
Query: 91 LTEMPEVTEL 100
L E +L
Sbjct: 134 LKNREETKDL 143
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 65.5 bits (158), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 267 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 326
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 327 YK 328
YK
Sbjct: 59 YK 60
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 123/335 (36%), Gaps = 51/335 (15%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
PGAD+D + P A EL + E+ E ++ V A VP ++ + GV++DL
Sbjct: 605 PGADLDLVAALPGTA--------ELTSVQRELREAVDVREVVGARVPGLRLRLDGVNVDL 656
Query: 123 -LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCM 181
+ A SL P + + + + A + V + P F R +
Sbjct: 657 AVVATGSL--DPVEAVARRTELGEAAAVALSAVSDAEAVLASVGGHEPA---FAGLARQV 711
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL 241
+ WA+ RG+ S G L G+ W++L AR + P L+ FF + W W PV
Sbjct: 712 KAWARARGLDSAPFGGLPGLAWSVLAARTVSEAGDLPPDGLLRHFFATWAAWDWREPVGG 771
Query: 242 CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 301
G L L I+TP+ P + V+T ++ E R E+
Sbjct: 772 PGGTSGRLPLT----------------IVTPSAPVRPCTDQVTTGMRDLITQELFRAWEL 815
Query: 302 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS---AENADDLRNWKGWVESRLRQLT 358
E W L P + + + + A AD+ R V R+R L
Sbjct: 816 LEEGSS------WADLLTPPPLHRRHAAWAIVTVGGGPAGVADEGR-----VRGRMRALV 864
Query: 359 LKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 393
+ CH P F+ Y +GL
Sbjct: 865 TDLAEVAPG---CHAWPRPFTTAP----ARYAIGL 892
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 30/243 (12%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
PGAD+D + P + G ++ +PE T + V A VP ++ G+++DL
Sbjct: 40 PGADLDLVAALPG----SPELAGVRARLTAALPEATGVREVVGARVPGLRMSVGGLAVDL 95
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL-RLVPKIQNFRTTLRCM 181
+ V P + + + ++A +L+ D +L ++ + + F R +
Sbjct: 96 VVVATGA-VDPAEAVGRRTELGEDA----AIALSAVSDADALLDQVADRREAFTDLARRV 150
Query: 182 RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS-MLVSRFFRVYTQWRWPNPVL 240
+ WAK RG+ S G L G+ W++L AR + A+PS L+ FF + W W PV
Sbjct: 151 KAWAKARGLDSAPFGGLPGLAWSVLAARTVR-EAGALPSDELLRHFFATWAAWDWREPV- 208
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 300
P M ++TP P S V+ ++ E R E
Sbjct: 209 -----------------GGPARPDLPMTVMTPTAPVRPCSDQVTEGMRDLITQELFRAWE 251
Query: 301 ICE 303
+ +
Sbjct: 252 VLD 254
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 109/313 (34%), Gaps = 58/313 (18%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
P D+D + V D E ++ +P + L PV A P + G+ +DL
Sbjct: 586 PDGDLDLITV-----ASAADAVAE--RVRVALPAASALRPVVGARSPGWRLDVGGLGVDL 638
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
A + + + D + V + G RV FR R ++
Sbjct: 639 TVA----------VAGNPAAWSSLGDAEAVLAAVGDRV-----------DRFRRLAREVK 677
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC 242
WA+ RG+ S G + G+ WA+L AR + ++ FF + W W +P+ L
Sbjct: 678 GWARARGLDSAPFGGVPGVGWAVLAARTVLDAGDGFDGGGLAEFFGTWAAWDWRDPIGLG 737
Query: 243 AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC 302
A+ P+ + I+TPA P + + V ++ E R E+
Sbjct: 738 AV---------------PERTGAPVTIMTPAAPVRSCTEQVGPGFRDLLTAELYRAWEVV 782
Query: 303 EAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 362
EA + L P + + + + + +R RLR L +E
Sbjct: 783 EAGGTD--------LATPPDLHRVHAAWAVVTVPHDRVGPVRG-------RLRALLTALE 827
Query: 363 RHTYNMLQCHPHP 375
P P
Sbjct: 828 TAGVADADAWPRP 840
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 29/249 (11%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
PGAD+D + V P A D G ++ +P L V A VP ++ G+ +DL
Sbjct: 91 PGADLDLVAVLPGPA----DAAGVRARVAAALPGARRLREVTGARVPGLRLHAYGLDVDL 146
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
+ + + L +++ + L A + +L+ + + F + R +
Sbjct: 147 VL--VGAGALDPGLAVARRAELGEAAAVALSALDDADAVRESVGA--SHAAFASLAREAK 202
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-------PSMLVSRFFRVYTQWRW 235
WA+ RG+ S G L G+ WA+L AR + AV P+ L FF + W W
Sbjct: 203 AWARARGLDSAPFGGLPGLAWAVLAARTVR---EAVRDAADLSPAGLRREFFGTWAAWDW 259
Query: 236 PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEF 295
PV L + R+P + ++TP P + + V +++ E
Sbjct: 260 SEPVSLLPADGAG---------RSPSPDP--VTVLTPRAPVRSCTAQVGPGMRDLLVREL 308
Query: 296 QRGHEICEA 304
R E+ EA
Sbjct: 309 YRAWEVLEA 317
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 55/344 (15%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
PGAD+D + P E ++ +PE L V A VP ++F+ +G+ +DL
Sbjct: 310 PGADLDLVAALPGAVGGAE----VRERIAAALPEAERLREVRGARVPGLRFRVAGLDVDL 365
Query: 123 LYARLSLWVIPEDLDISQDSILQNAD--EQTVRSLNGCRVTDQILRLV-PKIQNFRTTLR 179
+ V LD + ++ + A+ E +L+ D + V + F R
Sbjct: 366 VV------VATGGLDPA-GALARRAELGEAAAVALSAVSDADAVRESVGAEHAAFARLAR 418
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQ----LYPNAVPS------MLVSRFFRV 229
++ WA+ RG+ S G L GI WA+L AR + L P+ + L+ FF
Sbjct: 419 EVKAWARARGLDSAPFGGLPGIAWAVLAARTVREAAALSPDGLSPDGLSLDGLLREFFGA 478
Query: 230 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 289
+ W W +PV L P P + + ++TP+ P + + V LR
Sbjct: 479 WAAWDWCDPVALH------------HPPPAPGSEGAVT-VLTPSEPVRSCTAQVGPG-LR 524
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
++ G E+ EA E +A P + + + + + G
Sbjct: 525 DLL-----GRELYEAWESPQAG--------PPAPHRRHAAWAVVTVRGATPQEFEESLGR 571
Query: 350 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 393
RLR L +E P P + D Y +GL
Sbjct: 572 TRGRLRALLGALEEGGVAEAHAWPRPFERGDT----VARYAIGL 611
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 130/333 (39%), Gaps = 48/333 (14%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
PGAD+D + P EL + E+ +E+ V A VP ++ +F G+ +DL
Sbjct: 601 PGADLDLVAALPGTV--------ELGSLRRELGGASEVREVVGARVPGLRLRFDGLDVDL 652
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP---KIQNFRTTLR 179
V+ +++ + A+ +L V+D L + F R
Sbjct: 653 A-------VVATGAMDPGEAVDRRAELGEAAALALSAVSDAEAVLASVGGRGPAFAGLAR 705
Query: 180 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 239
++ WA+ RG+ S G L G+ W++L AR + PS L+ FF + W W PV
Sbjct: 706 QVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPSCLLRHFFATWAAWDWREPV 765
Query: 240 LLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGH 299
+E G + + TP+ P + + V T+ +R ++ +
Sbjct: 766 --GGLEGAPAG---------------PLTVATPSAPVRSCTDQV-TADMRDLITQ----- 802
Query: 300 EICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTL 359
E+ A E E W + P + + + A D + + +G V R+R L
Sbjct: 803 ELFRAWELLEEGASWTEVLAPPPLHRRHAAWAVVTAGA-GTDGVVD-EGRVRGRMRALIT 860
Query: 360 KIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 392
+ CH P F+ + P+ + +G
Sbjct: 861 DLAGLAPG---CHAWPRPFA--TAPVRYAIGLG 888
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 116/322 (36%), Gaps = 43/322 (13%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
PGAD+D + P + ++ +PE ++ V A VP ++ + + +DL
Sbjct: 654 PGADLDLVAALPGTV----ELAAVQAELSKALPEAADVREVVGARVPGLRLRLDRLDVDL 709
Query: 123 LYARLSLWVIPEDLDISQ--DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRC 180
+ V +D ++ D ++ + V + F R
Sbjct: 710 VV------VATGSMDPAEAVDRRVELGEAAAVALSAVSDADAVLASAGAHGPAFARLARQ 763
Query: 181 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 240
++ WA+ RG+ S G L G+ W++L AR + P L+ FF + W W PV
Sbjct: 764 VKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLRHFFATWAAWDWRTPV- 822
Query: 241 LCAIEEGSLGLQVWDPRRNPKDKYHLMP--IITPAYPCMNSSYNVSTSTLRIMMDEFQRG 298
P + H +P I TP+ P + V+ ++ E R
Sbjct: 823 ------------------GPAGQSHALPLTITTPSAPIRPCTDQVTAGMRDLVTQELFRA 864
Query: 299 HEICEAMEKN-EADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 357
E+ E + A W L P + + + + AD+ R + R R L
Sbjct: 865 WEVLEGAPTDPTARYPWAELLAPPPLHRRHAAWAVV-TAGPGADEGR-----LRGRTRSL 918
Query: 358 TLKIERHTYNMLQCHPHPGDFS 379
+ T + CH P F+
Sbjct: 919 ITDLAETTPD---CHAWPRPFT 937
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 58.9 bits (141), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Query: 215 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ 252
P +PSML+ RFFRV+ +W+WP+PV+LCAIE +G LGL+
Sbjct: 34 PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLK 73
>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 153
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 87 LHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 138
++ L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+
Sbjct: 2 FYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDL 53
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 360 KIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 399
+IER T MLQCHP+P ++ D SK +C++FMGLQRK+GV
Sbjct: 5 QIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGV 45
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 311 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 370
+V W L PF FF+ Y+ +L ++ISAE +KG VESR+R L +E + +
Sbjct: 17 EVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVL 76
Query: 371 CHPHPGDF 378
PHP F
Sbjct: 77 PQPHPVMF 84
>gi|385300970|gb|EIF45209.1| poly polymerase [Dekkera bruxellensis AWRI1499]
Length = 122
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 37/120 (30%)
Query: 1 MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQ- 59
M S+ + G+T P+S+A P+ +++ + + LR+ N +E+++ R +VL L
Sbjct: 1 MNSTQPKHYGVTPPVSIASPSPEEVKMNDAMIEELRNQNSFETEDGVQKRRKVLATLQTI 60
Query: 60 -----------------------------------VHGPGADIDTLCVGPRHATREEDFF 84
V+GPG+DIDTL V P+H T+ EDFF
Sbjct: 61 VQEFVYTVSRKKNMSEGMSKDAGGKLFTFGSYRLGVYGPGSDIDTLVVVPKHVTK-EDFF 119
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 135 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
DLDI+Q S +EQTV SLNGCRVTDQ L LVP I + + +R
Sbjct: 679 DLDIAQGSDTTECNEQTVDSLNGCRVTDQFLHLVPNISSLGYIMNGVR 726
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 159 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ------ 212
R TD + R +P FR R ++ WAK RG+Y+ GFL GI ++L+AR+ +
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696
Query: 213 -----LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 267
P L++ FF Y + W + + + R P++ ++
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAHQLAF----DPFFHRHALPYTRTPREPLAVL 752
Query: 268 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----- 322
PA N++ S + + + EF+R ++ + + W +
Sbjct: 753 GYFAPA---RNTALAASVPSTKTLAAEFRRAADV---LRGENGALGWAGFLGGGSGAKDD 806
Query: 323 FFEAYKNYLRIDI 335
F A+++Y+++D+
Sbjct: 807 FLAAHRSYVKLDV 819
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 42 TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
TVR+LNG RV D+ILRLVP F TTLRC++
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
+M++E ++G I + + ++A+ W LFE FF+ YK+Y+ + SA
Sbjct: 2 VMVEELKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDL 59
Query: 350 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 404
VES++ L +E++ + L Q P P D DK + + +GL K+ E
Sbjct: 60 VESKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPDKEE-FRTMWVIGLVFKK-TENSEN 117
Query: 405 EQFDIRLTVKEFKQAV-------SMYTLRKPGMQISVAHVTRRNL 442
D+ ++ F V M+ L M+I+ HV R+ L
Sbjct: 118 LSVDLTYDIQSFTDTVYSQAINSKMFEL---DMKIAAMHVKRKQL 159
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 148 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
D T RSLNG RV D+ILRLVP F TTLRC++
Sbjct: 59 DLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 290 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 349
+ ++EF++G I + + ++A W FE FF+ K+Y+ + SA W G
Sbjct: 2 VAVEEFKQGLAITDEILLSKAK--WSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGL 59
Query: 350 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 409
VES++R L +E++ + L H +P + +GL K+ E ++
Sbjct: 60 VESKIRILVGSLEKNEFITL-AHVNPE--------FRTIWVIGLVFKK---TENSENLNV 107
Query: 410 RLT--VKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 447
LT ++ F +QA++ M+ L M+ + HV R+ LP++V
Sbjct: 108 DLTYDIQSFMDTVYRQAINSKMFEL---DMKTAAMHVKRKQLHQLLPSYVL 155
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
TVRSLNG RV D+IL LVP F TTLRC++
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 65 ADIDTLCVGPRHA-TREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLL 123
+DID C+GP + T L + T+ V L V +++ + GV +DL
Sbjct: 421 SDIDVCCIGPFSSNTLFSVASSSLRKAATQ--GVRNLRRVKANTGTMLELEVQGVRMDLQ 478
Query: 124 YARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 179
Y + W P L + + + QT+ L R D + R +P I++FR R
Sbjct: 479 YCPAASVAQQW--PNVLRLPAKDPVWSLAPQTLNKLKAIRDIDYLRRSLPDIESFRLAHR 536
Query: 180 CMRFWAKRRGVYS 192
++ WA+ RGVYS
Sbjct: 537 FIKTWARSRGVYS 549
>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
Length = 608
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
TVRSLNG V D+ILRLVP TTLRC++
Sbjct: 151 TVRSLNGVHVADEILRLVPDAAALHTTLRCVK 182
>gi|53136848|emb|CAG32753.1| hypothetical protein RCJMB04_34p17 [Gallus gallus]
Length = 109
Score = 44.7 bits (104), Expect = 0.16, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
GIT PISLA P + D M T+KL + L+ ++E +EE R +LG+L+ +
Sbjct: 20 GITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRRILILGKLNNL 70
>gi|402577076|gb|EJW71033.1| hypothetical protein WUBG_18059 [Wuchereria bancrofti]
Length = 94
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 43/64 (67%), Gaps = 7/64 (10%)
Query: 2 GSSNGQ-------RLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVL 54
G+SNG+ LG+++PIS++GP + D++ + KL++YL+ +E++EE R +VL
Sbjct: 14 GNSNGKDNRLTTTYLGVSQPISISGPDEFDIVMSTKLDEYLQANGYFETEEEMNLRLKVL 73
Query: 55 GRLD 58
+++
Sbjct: 74 SKIN 77
>gi|428181303|gb|EKX50167.1| hypothetical protein GUITHDRAFT_103980 [Guillardia theta CCMP2712]
Length = 760
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 63 PGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDL 122
P +I G R R F L ++LT + + P+P+A VP++KF+
Sbjct: 452 PEEEIQRNAKGQRKTARFRYFLIGLAKLLTRQ-GMMNVEPLPNARVPIIKFQ-------- 502
Query: 123 LYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 182
AR + LD S D L V ++ C T+ + R + C++
Sbjct: 503 --AR-------DGLDFSFDCDL------CVNNVLACINTNLLFTYTMLDARVRPLIMCIK 547
Query: 183 FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 221
W K+R +++ G+L ++L+V + Q Y +P +
Sbjct: 548 HWVKQRQIHNAFRGYLSSYTYSLMVIQYLQ-YERILPCL 585
>gi|125581305|gb|EAZ22236.1| hypothetical protein OsJ_05891 [Oryza sativa Japonica Group]
Length = 126
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 151 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 200
TVRSLNG RV D+ILRLVP F TT A R G+ + GF G
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTT------AAVREGIDKLLRGFDGA 75
>gi|170070967|ref|XP_001869772.1| poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167866884|gb|EDS30267.1| poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 76
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 25/89 (28%)
Query: 9 LGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHGPGADID 68
+G+T ISLA P +D +T +L+K L N++E +
Sbjct: 1 MGMTSAISLAEPKTEDHTKTAELQKALEPYNVFED------------------------E 36
Query: 69 TLCVGPRHATREEDFFGELHQMLTEMPEV 97
++CV PR+ R+ D+FG ++L + PE
Sbjct: 37 SVCVAPRNIERQ-DYFGSFFELLEKQPET 64
>gi|341888961|gb|EGT44896.1| hypothetical protein CAEBREN_24044 [Caenorhabditis brenneri]
Length = 224
Score = 42.4 bits (98), Expect = 0.79, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 60 VHGPGADIDTLCVGPRHATREEDFFGELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVS 119
VH G DID++ + P ++ +L+ +A V +M + GV
Sbjct: 64 VHSSGGDIDSVLIAPS-------------------SKIKKLNAAGNAFVLLMTMECDGVE 104
Query: 120 IDLLYARLSLWVIPEDLDISQDS------------ILQNADEQTVRSLNGCRVTD--QIL 165
+DLL A + L IP +LD++ DS +L+ + G TD + L
Sbjct: 105 VDLLIACMDLATIPANLDLTSDSPSDQESLLMYPKVLKFTSKTQSVLFIGLEFTDVNKNL 164
Query: 166 RLVPKIQNFRTTL 178
L +I+NF+ T+
Sbjct: 165 DLTTEIENFKKTV 177
>gi|444729496|gb|ELW69909.1| Ras-associating and dilute domain-containing protein [Tupaia
chinensis]
Length = 1158
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQVHG 62
GI+ PISLA P D D T+KL + L+ ++E +EE SR +L +L+ +
Sbjct: 22 GISSPISLAAPKDTDCELTQKLIETLKPFGVFEEEEELQSRILILEKLNNLQA 74
>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 134
Score = 42.0 bits (97), Expect = 1.0, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 173 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 206
+F TTL C++FWAK RG+YSNV FL + W L
Sbjct: 103 HFLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 314 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQ 370
W LFEP FF Y++Y+ + ++ G VESRLR L E + Y +
Sbjct: 46 WSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVSNFELNRYVKIAHVN 104
Query: 371 CHPHPGDFSDKSKPLYCSYFMGLQ 394
C + SD+ L +F+G++
Sbjct: 105 CRSYGKGPSDEDAELVRKWFIGME 128
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 422 MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 457
MY+L KPGM ++V HV R +P++VF G + P+
Sbjct: 1 MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPT 36
>gi|355709244|gb|AES03527.1| poly polymerase gamma [Mustela putorius furo]
Length = 92
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 10 GITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQV 60
GIT PISLA P + D + T+KL ++ ++E +EE R VLG+L+ +
Sbjct: 34 GITSPISLACPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNL 84
>gi|428182086|gb|EKX50948.1| hypothetical protein GUITHDRAFT_66394 [Guillardia theta CCMP2712]
Length = 242
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 24/122 (19%)
Query: 100 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 159
+ +P A VP++KFK + +D ++ D D+S +++L C
Sbjct: 4 VEALPYARVPIIKFK-AQDGLDFVF----------DCDLSVNNVL------------ACI 40
Query: 160 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 219
TD + + R + C++ W K+R ++ G+L + L+V + Q Y +P
Sbjct: 41 NTDLLFTYTMLDKRVRPLIMCIKHWVKQRRIHKTFRGYLSSYTYTLMVIQYLQ-YERVLP 99
Query: 220 SM 221
+
Sbjct: 100 CL 101
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,260,081,031
Number of Sequences: 23463169
Number of extensions: 486835746
Number of successful extensions: 1175108
Number of sequences better than 100.0: 893
Number of HSP's better than 100.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1171341
Number of HSP's gapped (non-prelim): 1749
length of query: 696
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 546
effective length of database: 8,839,720,017
effective search space: 4826487129282
effective search space used: 4826487129282
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)