BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005454
(696 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 269/643 (41%), Positives = 380/643 (59%), Gaps = 40/643 (6%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
N L++ +A+ GS+ D R +F M +DSVS+N+ I G G EA++ + M++
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWL 213
P +T +S+L++CA L + G+QIHG+ + + NV V NAL +YA+ G +++ R +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 214 FDRMNNRNLVSWNLMISGYLKN-----------------GQPKKCIDL-----------F 245
F M + VSWN +I ++ GQ I F
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 246 QEM--QLLGLN-----PDEVTVSNILGACF-QTGRIDDAGRLFHVIKEK-DNVCWTTMIV 296
E+ Q+ GL DE T N L AC+ + G +D ++F + E+ DNV W +MI
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 297 GYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDD 356
GY N AL L ML R D F ++V+S+ A +A+L G VH +V ++
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 357 DLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKL- 415
D++V SAL+DMY KCG D A FN MP RN SWNSMI+GYA++GQ EAL L++ +
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 416 LQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSD 475
L PD TFV VLSAC HA L E G HF+S+S +G+ P ++H++CM ++LGR+ +
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 476 VDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKH--GEMAARHLFELEPINAGPYIMLS 533
+DK D I+ +P KPN LIW T+L C K G+ AA LF+LEP NA Y++L
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 832
Query: 534 NMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELS 593
NMYAA GRWED+ R MK +VKK A YSW+ + + VH FV+ D++HP+ ++IY++L
Sbjct: 833 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLK 892
Query: 594 KLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNI 653
+L +K+++AG+ P T L+D ++E K + + YHSEKLA+A+ L + PIRIMKN+
Sbjct: 893 ELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNL 952
Query: 654 RVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
RVCGDCH K+ S I GR IILRDSNRFHHF G CSC D W
Sbjct: 953 RVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 226/478 (47%), Gaps = 50/478 (10%)
Query: 72 SGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGF 131
+ + F++R L+ +D+ N L++A+ +G R +FD+MP+R+ VS+ ++G+
Sbjct: 19 AARFFHSR-LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 132 ANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQL--LDLRRGKQIHGKIVVGNLGG 189
+ G +EAL M K+ Y VS L AC ++ + + G+QIHG + +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 190 NVFVRNALTDMYAKG-GEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEM 248
+ V N L MY K G + A F + +N VSWN +IS Y + G + +F M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 249 QLLGLNPDEVTV-------------------------------------SNILGACFQTG 271
Q G P E T S ++ A ++G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 272 RIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSE-DVRPDKFSI---S 327
+ A ++F+ ++ ++ V ++VG + E+A LF +M S DV P+ + I S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 328 SVVSSCAKLASLYHGQVVHGKAVVLGVDDDLL-VSSALIDMYCKCGVTDDAWTVFNMMPT 386
S A+ L G+ VHG + G+ D ++ + + L++MY KCG DA VF M
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 387 RNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQN- 445
++ VSWNSMI G QNG +EA+ Y + + ++ P SFT +S LS+C + GQ
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 446 HFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCA 503
H +S+ GI ++ ++ L + +++ + S+P + + W++++ A
Sbjct: 438 HGESLKL--GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH-DQVSWNSIIGALA 492
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/503 (25%), Positives = 230/503 (45%), Gaps = 79/503 (15%)
Query: 60 FLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIR 119
F+ + L+ +AKSG L YAR +F++M R+ ++ N L+ R ++ LF M
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 120 DSV---SYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGK 176
V SY ++ F + E + L++G+
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEE------------------------------VGLKKGR 333
Query: 177 QIHGKIV-VGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKN 235
++HG ++ G + V + N L +MYAK G I AR +F M +++ VSWN MI+G +N
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 236 GQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC---------------------------- 267
G + ++ ++ M+ + P T+ + L +C
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453
Query: 268 -------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKE-EDALILFNEMLSEDV 319
+TG +++ ++F + E D V W ++I ++ + +A++ F
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ 513
Query: 320 RPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWT 379
+ ++ + SSV+S+ + L+ G+ +HG A+ + D+ +ALI Y KCG D
Sbjct: 514 KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEK 573
Query: 380 VFNMMPT-RNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHAD 438
+F+ M R+ V+WNSMI+GY N +AL L +LQ + DSF + +VLSA
Sbjct: 574 IFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVA 633
Query: 439 LFERGQN-HFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWST 497
ERG H S+ A + + + ++++ + +D A+ ++P + NS W++
Sbjct: 634 TLERGMEVHACSVRAC--LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNS 690
Query: 498 LLSVCAMKGDIKHGEMAARHLFE 520
++S A G GE A + LFE
Sbjct: 691 MISGYARHG---QGEEALK-LFE 709
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 73/298 (24%)
Query: 61 LHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARS----------------- 103
+ N L+ YA++G L R +F MP D +SWN+++ A ARS
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 104 ---------------------GSV-QDLRALFDKMPIRD-SVSYNTAIAGFANKGFSREA 140
G + + + L K I D + + N IA + G
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571
Query: 141 LQVFSRMQKDRFEPT------DYTH--------------------------VSALNACAQ 168
++FSRM + R T Y H + L+A A
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 169 LLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLM 228
+ L RG ++H V L +V V +AL DMY+K G +D A F+ M RN SWN M
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 229 ISGYLKNGQPKKCIDLFQEMQLLGLN-PDEVTVSNILGACFQTGRIDDAGRLFHVIKE 285
ISGY ++GQ ++ + LF+ M+L G PD VT +L AC G +++ + F + +
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D++ +AL+ +++ G + F+ MP+R+S S+N+ I+G+A G EAL++F M+
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 149 KDRFEPTDY-THVSALNACAQLLDLRRG-KQIHGKIVVGNLGGNVFVRNALTDMYAKGGE 206
D P D+ T V L+AC+ L G K L + + + D+ + GE
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 207 IDKARWLFDRMNNR-NLVSWNLMISGYLK-NGQPKKCIDLFQEMQLLGLNPDEVTVSNIL 264
+DK ++M + N++ W ++ + NG+ + EM L L P+ +L
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEM-LFQLEPENAVNYVLL 831
Query: 265 GACFQT-GRIDDAGRLFHVIKEKD-----NVCWTTM 294
G + GR +D + +K+ D W TM
Sbjct: 832 GNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 867
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 328 SVVSSCAK---LASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMM 384
S V SC A +H ++ + +D D+ + + LI+ Y + G + A VF+ M
Sbjct: 8 SFVQSCVGHRGAARFFHSRLYKNR-----LDKDVYLCNNLINAYLETGDSVSARKVFDEM 62
Query: 385 PTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHAD----LF 440
P RN VSW +++GY++NG+ EAL +++E + + + FVSVL AC LF
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 441 ERGQNHFDSISAVHGITPSLDHY--ACMINLLGRS-----SDVDKAVDLIKSLPHKPNSL 493
R +HG+ L + A + N+L V A+ + K NS+
Sbjct: 123 GR---------QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK-NSV 172
Query: 494 IWSTLLSVCAMKGD 507
W++++SV + GD
Sbjct: 173 SWNSIISVYSQAGD 186
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/696 (38%), Positives = 402/696 (57%), Gaps = 41/696 (5%)
Query: 5 HKLRQAIDTLYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNR 64
HK + + + G T+ T ++ +E K++ S + N + + N
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS-VSNS 186
Query: 65 LLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSY 124
LL+ YAK G A+ +FD+M +RDI SWNA+++ H + G + A F++M RD V++
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 125 NTAIAGFANKGFSREALQVFSRMQKDRF-EPTDYTHVSALNACAQLLDLRRGKQIHGKIV 183
N+ I+GF +G+ AL +FS+M +D P +T S L+ACA L L GKQIH IV
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 184 VGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLV--SWNLMISGYLKNGQPKKC 241
+ V NAL MY++ G ++ AR L ++ ++L + ++ GY+K
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK------- 359
Query: 242 IDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQN 301
G ++ A +F +K++D V WT MIVGY Q+
Sbjct: 360 ----------------------------LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 302 GKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVS 361
G +A+ LF M+ RP+ +++++++S + LASL HG+ +HG AV G + VS
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 362 SALIDMYCKCGVTDDAWTVFNMMP-TRNVVSWNSMINGYAQNGQDLEALALYDKLLQENL 420
+ALI MY K G A F+++ R+ VSW SMI AQ+G EAL L++ +L E L
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 421 KPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAV 480
+PD T+V V SAC HA L +G+ +FD + V I P+L HYACM++L GR+ + +A
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 481 DLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACG 540
+ I+ +P +P+ + W +LLS C + +I G++AA L LEP N+G Y L+N+Y+ACG
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 541 RWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQ 600
+WE+ A IR SMK VKK +SWIE+ +KVH F ED THPE IY + K+ +++
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Query: 601 EAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCH 660
+ G+ P+T VLHD +EE K + + +HSEKLA+A+ LI P T +RIMKN+RVC DCH
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTT-LRIMKNLRVCNDCH 750
Query: 661 LFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
+KF S ++GR II+RD+ RFHHF G CSC+D W
Sbjct: 751 TAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 259/522 (49%), Gaps = 84/522 (16%)
Query: 58 TTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMP 117
+ +L N L++ Y+K+G +AR LFD+MPLR SWN +LSA+++ G + FD++P
Sbjct: 48 SVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP 107
Query: 118 IRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQ 177
RDSVS+ T I G+ N G +A++V M K+ EPT +T + L + A + GK+
Sbjct: 108 QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 167
Query: 178 IHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQ 237
+H IV L GNV V N+L +MYAK G+ A+++FDRM R++ SWN MI+ +++ GQ
Sbjct: 168 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 238 PKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVG 297
+ F++M E+D V W +MI G
Sbjct: 228 MDLAMAQFEQM-----------------------------------AERDIVTWNSMISG 252
Query: 298 YTQNGKEEDALILFNEMLSED-VRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDD 356
+ Q G + AL +F++ML + + PD+F+++SV+S+CA L L G+ +H V G D
Sbjct: 253 FNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI 312
Query: 357 DLLVSSALIDMYCKCGVTD---------------------------------DAWTVFNM 383
+V +ALI MY +CG + A +F
Sbjct: 313 SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVS 372
Query: 384 MPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERG 443
+ R+VV+W +MI GY Q+G EA+ L+ ++ +P+S+T ++LS G
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG 432
Query: 444 -QNHFDSISAVHGITPSLDHYACMINLLGRSSDV---DKAVDLIKSLPHKPNSLIWSTLL 499
Q H ++ + G S+ +I + ++ ++ +A DLI+ + +++ W++++
Sbjct: 433 KQIHGSAVKS--GEIYSVSVSNALITMYAKAGNITSASRAFDLIRC---ERDTVSWTSMI 487
Query: 500 SVCAMKGDIKHGEMAARHLFELEPINA--GPYIMLSNMYAAC 539
A G H E A LFE + +I +++AC
Sbjct: 488 IALAQHG---HAE-EALELFETMLMEGLRPDHITYVGVFSAC 525
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 181/411 (44%), Gaps = 89/411 (21%)
Query: 154 PTDYTHVSALNACAQLLDLRRGKQ--------IHGKIVVGNLGGNVFVRNALTDMYAKGG 205
P + + L C LL K +H +++ L +V++ N L ++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 206 EIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILG 265
AR LFD M R SWN ++S Y K G
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGD---------------------------- 95
Query: 266 ACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFS 325
+D F + ++D+V WTTMIVGY G+ A+ + +M+ E + P +F+
Sbjct: 96 -------MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFT 148
Query: 326 ISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKC-------------- 371
+++V++S A + G+ VH V LG+ ++ VS++L++MY KC
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 372 -----------------GVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDK 414
G D A F M R++V+WNSMI+G+ Q G DL AL ++ K
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 415 LLQEN-LKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLL--- 470
+L+++ L PD FT SVLSAC + + G+ H +T D ++N L
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS-----HIVTTGFDISGIVLNALISM 323
Query: 471 -GRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEM-AARHLF 519
R V+ A LI+ K + T L + G IK G+M A+++F
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTAL----LDGYIKLGDMNQAKNIF 370
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/700 (36%), Positives = 409/700 (58%), Gaps = 43/700 (6%)
Query: 25 AYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLH-NRLLHFYAKSGKLFYARDLFD 83
+Y ++ R + ELA++L M P + N ++ Y ++ L AR+LF+
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEM------PERDLVSWNVMIKGYVRNRNLGKARELFE 150
Query: 84 KMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQV 143
MP RD+ SWN +LS +A++G V D R++FD+MP ++ VS+N ++ + EA +
Sbjct: 151 IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 144 FSRMQ-----------------------KDRFEPTDYTHVSALNAC----AQLLDLRRGK 176
F + + F+ + V + N AQ + +
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 177 QIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNG 236
Q+ + V + VF A+ Y + +++AR LFD+M RN VSWN M++GY++
Sbjct: 271 QLFDESPVQD----VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGE 326
Query: 237 QPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIV 296
+ + +LF M ++ T + ++ Q G+I +A LF + ++D V W MI
Sbjct: 327 RMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 297 GYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDD 356
GY+Q+G +AL LF +M E R ++ S SS +S+CA + +L G+ +HG+ V G +
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 357 DLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLL 416
V +AL+ MYCKCG ++A +F M +++VSWN+MI GY+++G AL ++ +
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 417 QENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDV 476
+E LKPD T V+VLSAC H L ++G+ +F +++ +G+ P+ HYACM++LLGR+ +
Sbjct: 503 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 562
Query: 477 DKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMY 536
+ A +L+K++P +P++ IW TLL + G+ + E AA +F +EP N+G Y++LSN+Y
Sbjct: 563 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 537 AACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLI 596
A+ GRW DV +R M+ K VKK YSWIEI NK H F D HPE + I+ L +L
Sbjct: 623 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 682
Query: 597 KKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVC 656
++++AG+ T +VLHD +EEEK + + YHSE+LA+AY +++ G PIR++KN+RVC
Sbjct: 683 LRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSG-RPIRVIKNLRVC 741
Query: 657 GDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
DCH +K+ + I GR IILRD+NRFHHF G+CSC D W
Sbjct: 742 EDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 221/485 (45%), Gaps = 69/485 (14%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
DI WN +S++ R+G + +F +MP SVSYN I+G+ G A ++F M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 149 KDRFEPTD-----YTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAK 203
+ + Y L +L ++ + +V N + YA+
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPER-------------DVCSWNTMLSGYAQ 169
Query: 204 GGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNI 263
G +D AR +FDRM +N VSWN ++S Y++N + ++ LF+ + L V+ + +
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCL 225
Query: 264 LGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRP-- 321
LG + +I +A + F + +D V W T+I GY Q+GK ++A LF+E +DV
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 322 -------------------DKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSS 362
DK + VS A LA G+ + + V VS+
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 363 --ALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENL 420
+I Y +CG +A +F+ MP R+ VSW +MI GY+Q+G EAL L+ ++ +E
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 421 KPDSFTFVSVLSACLHADLFERGQNHFDSISAVHG-ITPSLDHYACMIN-----LLGRSS 474
+ + +F S LS C E G+ +HG + C + + +
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQ-------LHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 475 DVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFE------LEPINAGP 528
+++A DL K + K + + W+T+++ + G GE+A R FE L+P +A
Sbjct: 459 SIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG---FGEVALR-FFESMKREGLKPDDATM 513
Query: 529 YIMLS 533
+LS
Sbjct: 514 VAVLS 518
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 32/160 (20%)
Query: 18 GQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFY 77
G +++ + C V +EL K+L + YE F+ N LL Y K G +
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC-FVGNALLLMYCKCGSIEE 462
Query: 78 ARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFS 137
A DLF +M +DI+SWN T IAG++ GF
Sbjct: 463 ANDLFKEMAGKDIVSWN-------------------------------TMIAGYSRHGFG 491
Query: 138 REALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQ 177
AL+ F M+++ +P D T V+ L+AC+ + +G+Q
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 335 KLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNS 394
K A+ Q K ++ D D+ + I Y + G ++A VF MP + VS+N
Sbjct: 41 KRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNG 100
Query: 395 MINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVH 454
MI+GY +NG+ A L+D++ + +L +S + + R +N +
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDL----------VSWNVMIKGYVRNRN-LGKARELF 149
Query: 455 GITPSLD--HYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSV 501
I P D + M++ ++ VD A + +P K N + W+ LLS
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK-NDVSWNALLSA 197
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/704 (36%), Positives = 399/704 (56%), Gaps = 67/704 (9%)
Query: 59 TFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPI 118
TFL+N ++H YA YAR +FD++P ++ SWN LL A++++G + ++ + F+K+P
Sbjct: 41 TFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD 100
Query: 119 RDSVSYNTAIAGFANKGFSREALQVFSRMQKD-RFEPTDYTHVSALNACAQLLDLRRGKQ 177
RD V++N I G++ G A++ ++ M +D T T ++ L + + GKQ
Sbjct: 101 RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQ 160
Query: 178 IHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLV-------------- 223
IHG+++ + V + L MYA G I A+ +F +++RN V
Sbjct: 161 IHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGM 220
Query: 224 ----------------SWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC 267
SW MI G +NG K+ I+ F+EM++ GL D+ ++L AC
Sbjct: 221 IEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 268 FQTGRIDD-----------------------------------AGRLFHVIKEKDNVCWT 292
G I++ A +F +K+K+ V WT
Sbjct: 281 GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWT 340
Query: 293 TMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVL 352
M+VGY Q G+ E+A+ +F +M + PD +++ +S+CA ++SL G HGKA+
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS 400
Query: 353 GVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALY 412
G+ + VS++L+ +Y KCG DD+ +FN M R+ VSW +M++ YAQ G+ +E + L+
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 413 DKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGR 472
DK++Q LKPD T V+SAC A L E+GQ +F +++ +GI PS+ HY+CMI+L R
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Query: 473 SSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIML 532
S +++A+ I +P P+++ W+TLLS C KG+++ G+ AA L EL+P + Y +L
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLL 580
Query: 533 SNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEEL 592
S++YA+ G+W+ VA +R M+ KNVKK SWI+ K+H F ++D + P + IY +L
Sbjct: 581 SSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Query: 593 SKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKN 652
+L K+ + G+ P+T V HD +E KVK + YHSE+LA+A+ LI P G PIR+ KN
Sbjct: 641 EELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSG-QPIRVGKN 699
Query: 653 IRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
+RVC DCH K S + GR I++RD+ RFH F G CSC D W
Sbjct: 700 LRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 178/473 (37%), Gaps = 115/473 (24%)
Query: 173 RRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGY 232
R K IHG I+ F+ N + YA AR +FDR+ NL SWN ++ Y
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 233 LKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWT 292
K G L EM+ F + ++D V W
Sbjct: 83 SKAG-------LISEME----------------------------STFEKLPDRDGVTWN 107
Query: 293 TMIVGYTQNGKEEDALILFNEMLSE-DVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVV 351
+I GY+ +G A+ +N M+ + + ++ +++ + + G+ +HG+ +
Sbjct: 108 VLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK 167
Query: 352 LGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNV---------------------- 389
LG + LLV S L+ MY G DA VF + RN
Sbjct: 168 LGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQL 227
Query: 390 --------VSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC------- 434
VSW +MI G AQNG EA+ + ++ + LK D + F SVL AC
Sbjct: 228 FRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAIN 287
Query: 435 ----LHADLFERG-QNHFDSISA----------VHGITPSLDH--------YACMINLLG 471
+HA + Q+H SA +H D + M+ G
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 472 RSSDVDKAVDLIKSLPHK---PNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAG- 527
++ ++AV + + P+ +S CA ++ G F + I +G
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-----FHGKAITSGL 402
Query: 528 -PYIMLSN----MYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKF 575
Y+ +SN +Y CG +D + + M ++ A SW + + +F
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD-----AVSWTAMVSAYAQF 450
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/692 (35%), Positives = 403/692 (58%), Gaps = 47/692 (6%)
Query: 14 LYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQ-----SHMDLNFYEPNTTFLHNRLLHF 68
++S G L C ++ ++ K++ S +D++ F+ + H
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD------AFVQGSMFHM 160
Query: 69 YAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIR----DSVSY 124
Y + G++ AR +FD+M +D+++ +ALL A+AR G ++++ + +M + VS+
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 125 NTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVV 184
N ++GF G+ +EA+ +F ++ F P T S L + L G+ IHG ++
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 185 GNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDL 244
L + V +A+ DMY K G + LF++ N I+G +NG K +++
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 245 FQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKE 304
F+ + E T+ E + V WT++I G QNGK+
Sbjct: 341 FELFK-------EQTM------------------------ELNVVSWTSIIAGCAQNGKD 369
Query: 305 EDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSAL 364
+AL LF EM V+P+ +I S++ +C +A+L HG+ HG AV + + D++ V SAL
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 365 IDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDS 424
IDMY KCG + + VFNMMPT+N+V WNS++NG++ +G+ E +++++ L++ LKPD
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDF 489
Query: 425 FTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIK 484
+F S+LSAC L + G +F +S +GI P L+HY+CM+NLLGR+ + +A DLIK
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 485 SLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWED 544
+P +P+S +W LL+ C ++ ++ E+AA LF LEP N G Y++LSN+YAA G W +
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTE 609
Query: 545 VASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGF 604
V SIR+ M+S +KK SWI++ N+V+ ++ D++HP+ + I E++ ++ K+++++G
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
Query: 605 SPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMK 664
PN LHD +E+E+ + + HSEKLA+ + L+ P G TP++++KN+R+CGDCH +K
Sbjct: 670 RPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDG-TPLQVIKNLRICGDCHAVIK 728
Query: 665 FASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
F S GR I +RD+NRFHHF G CSC D W
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/638 (38%), Positives = 379/638 (59%), Gaps = 19/638 (2%)
Query: 63 NRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSV 122
N L+ Y K+G++ AR +FD MP R+++SW AL+ + +G V +LF KMP ++ V
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 123 SYNTAIAGFANKGFSREALQVFSRM-QKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGK 181
S+ + GF G +A +++ + KD T H C + G+ +
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIH----GLC------KEGRVDEAR 192
Query: 182 IVVGNLGG-NVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKK 240
+ + +V + Y + +D AR +FD M + VSW M+ GY++NG+ +
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 241 CIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQ 300
+LF+ M + + + + ++ Q G I A R+F +KE+++ W T+I + +
Sbjct: 253 AEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 301 NGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLV 360
NG E +AL LF M + VRP ++ S++S CA LASL+HG+ VH + V D D+ V
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 361 SSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKL-LQEN 419
+S L+ MY KCG + +F+ P+++++ WNS+I+GYA +G EAL ++ ++ L +
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428
Query: 420 LKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKA 479
KP+ TFV+ LSAC +A + E G ++S+ +V G+ P HYACM+++LGR+ ++A
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 480 VDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAAC 539
+++I S+ +P++ +W +LL C + E A+ L E+EP N+G YI+LSNMYA+
Sbjct: 489 MEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQ 548
Query: 540 GRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSED-RTHPETEIIYEELSKLIKK 598
GRW DVA +R MK++ V+K SW E++NKVH F +HPE E I + L +L
Sbjct: 549 GRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGL 608
Query: 599 LQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGD 658
L+EAG++P+ LHD EEEKV S+ YHSE+LA+AY L+K G+ PIR+MKN+RVC D
Sbjct: 609 LREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGI-PIRVMKNLRVCSD 667
Query: 659 CHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
CH +K S + R IILRD+NRFHHF G CSCKD W
Sbjct: 668 CHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 151/302 (50%), Gaps = 32/302 (10%)
Query: 205 GEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVS--N 262
G+I +AR LFD +++++ SWN M++GY N P+ LF EM PD +S
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIISWNG 84
Query: 263 ILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPD 322
++ + G ID+A ++F ++ E++ V WT ++ GY NGK + A LF +M P+
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PE 138
Query: 323 KFSISSVVSSCAKLASLYHGQVVHG-KAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVF 381
K +S V + L G++ K + D D + +++I CK G D+A +F
Sbjct: 139 KNKVSWTV---MLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 382 NMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFE 441
+ M R+V++W +M+ GY QN + +A ++D + ++ ++ S+L + E
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIE 251
Query: 442 RGQNHFDSISAVHGITPSLDHYAC--MINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLL 499
+ F+ + P AC MI+ LG+ ++ KA + S+ + N W T++
Sbjct: 252 DAEELFE-------VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER-NDASWQTVI 303
Query: 500 SV 501
+
Sbjct: 304 KI 305
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 63/237 (26%)
Query: 376 DAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENL--------------- 420
DA +F+ MP RN++SWN +++GY +NG+ EA ++D + + N+
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 421 ------------KPDSFTFVSVLSACLH-------ADLFER--GQNHFDSISAVHGITP- 458
+ + ++ +L L L+E +++ S +HG+
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 459 ----------------SLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVC 502
S+ + M+ G+++ VD A + +P K + W+++L
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK-TEVSWTSMLMGY 244
Query: 503 AMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIR---SSMKSKN 556
G I+ E LFE+ P+ P I + M + G+ ++A R SMK +N
Sbjct: 245 VQNGRIEDAE----ELFEVMPVK--PVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 17/190 (8%)
Query: 370 KCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVS 429
+ G +A +F+ ++++ SWNSM+ GY N +A L+D++ N+ ++
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWNG 84
Query: 430 VLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHK 489
++S + + + FD + + ++ + ++ + VD A L +P K
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVS-----WTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 490 PNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAAC--GRWEDVAS 547
N + W+ +L G I A L+E+ P + S ++ C GR ++
Sbjct: 140 -NKVSWTVMLIGFLQDGRIDD----ACKLYEMIP-DKDNIARTSMIHGLCKEGRVDEARE 193
Query: 548 IRSSMKSKNV 557
I M ++V
Sbjct: 194 IFDEMSERSV 203
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/645 (37%), Positives = 378/645 (58%), Gaps = 42/645 (6%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D+ +L+ ++R +V + R LFD+MP+RD S+N I+G+ G ++EAL + + ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
T VS L+AC + D RG IH + L +FV N L D+YA+ G +
Sbjct: 244 A----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPD------------ 256
+ +FDRM R+L+SWN +I Y N QP + I LFQEM+L + PD
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 257 -----------------------EVTVSNILGACF-QTGRIDDAGRLFHVIKEKDNVCWT 292
++T+ N + + + G +D A +F+ + D + W
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 293 TMIVGYTQNGKEEDALILFNEMLSE-DVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVV 351
T+I GY QNG +A+ ++N M E ++ ++ + SV+ +C++ +L G +HG+ +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 352 LGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALAL 411
G+ D+ V ++L DMY KCG +DA ++F +P N V WN++I + +G +A+ L
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 412 YDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLG 471
+ ++L E +KPD TFV++LSAC H+ L + GQ F+ + +GITPSL HY CM+++ G
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 472 RSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIM 531
R+ ++ A+ IKS+ +P++ IW LLS C + G++ G++A+ HLFE+EP + G +++
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Query: 532 LSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEE 591
LSNMYA+ G+WE V IRS K ++K +S +E+DNKV F + ++THP E +Y E
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 592 LSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMK 651
L+ L KL+ G+ P+ + VL D +++EK + HSE+LA+A+ LI P T IRI K
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATP-AKTTIRIFK 778
Query: 652 NIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
N+RVCGDCH KF S I R II+RDSNRFHHF G CSC D W
Sbjct: 779 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 236/515 (45%), Gaps = 82/515 (15%)
Query: 64 RLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVS 123
+L++ Y G + AR FD + RD+ +WN ++S + R+G+
Sbjct: 91 KLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN------------------ 132
Query: 124 YNTAIAGFANKGFSREALQVFSR-MQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKI 182
S E ++ FS M P T S L AC ++D G +IH
Sbjct: 133 -------------SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176
Query: 183 VVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCI 242
+ +V+V +L +Y++ + AR LFD M R++ SWN MISGY ++G K+ +
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 243 DLFQEMQLLGLNPDEVTVSNILGACFQT-------------------------------- 270
L ++ + D VTV ++L AC +
Sbjct: 237 TLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 271 ---GRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSIS 327
GR+ D ++F + +D + W ++I Y N + A+ LF EM ++PD ++
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 328 SVVSSCAKLASLYHGQVVHGKAVVLG-VDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPT 386
S+ S ++L + + V G + G +D+ + +A++ MY K G+ D A VFN +P
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 387 RNVVSWNSMINGYAQNGQDLEALALYDKLLQEN-LKPDSFTFVSVLSACLHADLFERGQN 445
+V+SWN++I+GYAQNG EA+ +Y+ + +E + + T+VSVL AC A +G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 446 HFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMK 505
+ +G+ + + ++ G+ ++ A+ L +P + NS+ W+TL++
Sbjct: 473 LHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Query: 506 GDIKHGEMAARHLFELEPINAGP-YIMLSNMYAAC 539
G HGE A E+ P +I + +AC
Sbjct: 531 G---HGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 73/447 (16%)
Query: 171 DLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMIS 230
+L+ K +H ++VV NV + L ++Y G + AR FD + NR++ +WNLMIS
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 231 GYLKNGQPKKCIDLFQEMQL-LGLNPDEVTVSNILGAC---------------------- 267
GY + G + I F L GL PD T ++L AC
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDV 185
Query: 268 ----------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSE 317
+ + +A LF + +D W MI GY Q+G ++AL L N + +
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 318 DVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDA 377
D ++ S++S+C + G +H ++ G++ +L VS+ LID+Y + G D
Sbjct: 246 ----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 378 WTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLS----- 432
VF+ M R+++SWNS+I Y N Q L A++L+ ++ ++PD T +S+ S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 433 ----ACLHADLFERGQNHF--------------------DSISAVHGITPSLD--HYACM 466
AC F + F DS AV P+ D + +
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 467 INLLGRSSDVDKAVDLIKSLPHK----PNSLIWSTLLSVCAMKGDIKHG-EMAARHLFEL 521
I+ ++ +A+++ + + N W ++L C+ G ++ G ++ R L
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 522 EPINAGPYIMLSNMYAACGRWEDVASI 548
++ L++MY CGR ED S+
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSL 508
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 227/521 (43%), Gaps = 121/521 (23%)
Query: 13 TLYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKS 72
TL + +A L+ CT D + S+ + E + F+ N+L+ YA+
Sbjct: 237 TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE-SELFVSNKLIDLYAEF 295
Query: 73 GKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFA 132
G+L + +FD+M +RD+ISWN+++ A+ ++ P+R
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYE-----------LNEQPLR------------- 331
Query: 133 NKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHG-KIVVGNLGGNV 191
A+ +F M+ R +P T +S + +QL D+R + + G + G ++
Sbjct: 332 -------AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 192 FVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLL 251
+ NA+ MYAK G +D AR +F+ + N +++SWN +ISGY +NG + I+++ M+
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 252 G-LNPDEVTVSNILGACFQT-----------------------------------GRIDD 275
G + ++ T ++L AC Q GR++D
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 276 AGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAK 335
A LF+ I ++V W T+I + +G E A++LF EML E V+PD + +++S+C+
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS- 563
Query: 336 LASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVS---- 391
G+ D+ F MM T ++
Sbjct: 564 ----------------------------------HSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 392 -WNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC-LHA--DLFERGQNHF 447
+ M++ Y + GQ AL + +L+PD+ + ++LSAC +H DL + H
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 448 DSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPH 488
+ P Y +++ + S+ + VD I+S+ H
Sbjct: 647 FEVE------PEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 195 NALTDMYAKGGE---IDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCID----LFQE 247
NAL D + G E ID LF Y N Q KC+ + ++
Sbjct: 39 NALQDCWKNGNESKEIDDVHTLFR----------------YCTNLQSAKCLHARLVVSKQ 82
Query: 248 MQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDA 307
+Q + ++ V + LG + A F I+ +D W MI GY + G +
Sbjct: 83 IQNVCISAKLVNLYCYLG------NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEV 136
Query: 308 LILFNE-MLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALID 366
+ F+ MLS + PD + SV+ +C ++ G +H A+ G D+ V+++LI
Sbjct: 137 IRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIH 193
Query: 367 MYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFT 426
+Y + +A +F+ MP R++ SWN+MI+GY Q+G EAL L + L DS T
Sbjct: 194 LYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAMDSVT 249
Query: 427 FVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINL---LGRSSDVDKAVD 481
VS+LSAC A F RG S S HG+ L +I+L GR D K D
Sbjct: 250 VVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/665 (37%), Positives = 382/665 (57%), Gaps = 43/665 (6%)
Query: 63 NRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSV 122
N ++ Y +G AR LFD+M R+++SWN L+S + ++ + + R +F+ MP R+ V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 123 SYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLD---LRRGKQIH 179
S+ + G+ +G EA +F RM + VS L+D + + ++++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRM-------PERNEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 180 GKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPK 239
+ V ++ + + L + G +D+AR +FD M RN+V+W MI+GY +N +
Sbjct: 165 DMMPVKDVVASTNMIGGL----CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 240 KCIDLFQEM----------QLLGLNPD----------EVTVSNILGAC-------FQTGR 272
LF+ M LLG EV + AC + G
Sbjct: 221 VARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGE 280
Query: 273 IDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSS 332
I A R+F +++++DN W MI Y + G E +AL LF +M + VRP S+ S++S
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 333 CAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSW 392
CA LASL +G+ VH V DDD+ V+S L+ MY KCG A VF+ +++++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 393 NSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISA 452
NS+I+GYA +G EAL ++ ++ P+ T +++L+AC +A E G F+S+ +
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 453 VHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGE 512
+TP+++HY+C +++LGR+ VDKA++LI+S+ KP++ +W LL C + E
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 513 MAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKV 572
+AA+ LFE EP NAG Y++LS++ A+ +W DVA +R +M++ NV KF SWIE+ KV
Sbjct: 521 VAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKV 580
Query: 573 HKFVSED-RTHPETEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKL 631
H F + HPE +I L K L+EAG+SP+ VLHD EEEKV S+ HSE+L
Sbjct: 581 HMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERL 640
Query: 632 ALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCS 691
A+AY L+K P GV PIR+MKN+RVCGDCH +K S + R IILRD+NRFHHF G CS
Sbjct: 641 AVAYGLLKLPEGV-PIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECS 699
Query: 692 CKDNW 696
C+D W
Sbjct: 700 CRDYW 704
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 220/479 (45%), Gaps = 61/479 (12%)
Query: 97 LSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTD 156
+S +R G + + R FD + + S+N+ ++G+ + G +EA Q+F M +R +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-ERNVVSW 82
Query: 157 YTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDR 216
VS +++ R ++ + NV A+ Y + G + +A LF R
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPE-------RNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 217 MNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDA 276
M RN VSW +M G + +G+ K L+ M + D V +N++G + GR+D+A
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV----KDVVASTNMIGGLCREGRVDEA 191
Query: 277 GRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKL 336
+F ++E++ V WTTMI GY QN + + A LF +V P+K +S
Sbjct: 192 RLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF------EVMPEKTEVS--------W 237
Query: 337 ASLYHGQVVHGKAVVLGVDD-----------DLLVSSALIDMYCKCGVTDDAWTVFNMMP 385
S+ G + G+ ++D ++ +A+I + + G A VF++M
Sbjct: 238 TSMLLGYTLSGR-----IEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME 292
Query: 386 TRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERG-Q 444
R+ +W MI Y + G +LEAL L+ ++ ++ ++P + +S+LS C + G Q
Sbjct: 293 DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Query: 445 NHFDSISAVHGITPSLDH----YACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLS 500
H H + D + ++ + + ++ KA + K + ++W++++S
Sbjct: 353 VH------AHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIIS 405
Query: 501 VCAMKGDIKHGEMAARHLFELEPINAGP-YIMLSNMYAAC---GRWEDVASIRSSMKSK 555
A G GE A + E+ P + L + AC G+ E+ I SM+SK
Sbjct: 406 GYASHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 169/400 (42%), Gaps = 80/400 (20%)
Query: 205 GEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNIL 264
G+I++AR FD + + + SWN ++SGY NG PK+ LF EM + V+ + ++
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS----ERNVVSWNGLV 86
Query: 265 GACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKF 324
+ I +A +F ++ E++ V WT M+ GY Q G +A LF M P++
Sbjct: 87 SGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERN 140
Query: 325 SISSVVSSCAKLASLYHGQVVHG------KAVVLGVDDDLLVSSALIDMYCKCGVTDDAW 378
+S V ++ G + G K + D++ S+ +I C+ G D+A
Sbjct: 141 EVSWTV--------MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 379 TVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHAD 438
+F+ M RNVV+W +MI GY QN + A L++ + ++ ++ S+L +
Sbjct: 193 LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSG 248
Query: 439 LFERGQNHFDSISAVHGITPSLDHYAC--MINLLGRSSDVDK------------------ 478
E + F+ + P AC MI G ++ K
Sbjct: 249 RIEDAEEFFE-------VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301
Query: 479 -------------AVDLIKSL------PHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLF 519
A+DL + P P SLI ++LSVCA +++G HL
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFP-SLI--SILSVCATLASLQYGRQVHAHLV 358
Query: 520 ELEPINAGPYI--MLSNMYAACGRWEDVASIRSSMKSKNV 557
+ + Y+ +L MY CG + SK++
Sbjct: 359 RCQ-FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 365 IDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDS 424
I + G ++A F+ + + + SWNS+++GY NG EA L+D++ + N+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 425 FTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIK 484
++ ++S + + +N F+ + + ++ + M+ + V +A L
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVS-----WTAMVKGYMQEGMVGEAESLFW 134
Query: 485 SLPHKPNSLIWSTLLSVCAMKGDIKHGEM-AARHLFELEPINAGPYIMLSNMYAAC---G 540
+P + N + W+ + G I G + AR L+++ P+ + +NM G
Sbjct: 135 RMPER-NEVSWTVMFG-----GLIDDGRIDKARKLYDMMPVK--DVVASTNMIGGLCREG 186
Query: 541 RWEDVASIRSSMKSKNV 557
R ++ I M+ +NV
Sbjct: 187 RVDEARLIFDEMRERNV 203
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/647 (38%), Positives = 375/647 (57%), Gaps = 49/647 (7%)
Query: 59 TFLHNRLLHFYAKSGK----LFYARDLFDKMPLRDIISWNALLSAHARSGSV----QDLR 110
T + N L+ Y+K L AR +FD++ +D SW +++ + ++G + L
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 111 ALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLL 170
+ D M + V+YN I+G+ N+GF +EAL++ RM E ++T+ S + ACA
Sbjct: 244 GMDDNMKL---VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300
Query: 171 DLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMIS 230
L+ GKQ+H V+ + N+L +Y K G+ D+AR +F++M ++LVSWN ++S
Sbjct: 301 LLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 231 GYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVC 290
GY+ +G I +A +F +KEK+ +
Sbjct: 360 GYVSSGH-----------------------------------IGEAKLIFKEMKEKNILS 384
Query: 291 WTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAV 350
W MI G +NG E+ L LF+ M E P ++ S + SCA L + +GQ H + +
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 351 VLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALA 410
+G D L +ALI MY KCGV ++A VF MP + VSWN++I Q+G EA+
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 411 LYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLL 470
+Y+++L++ ++PD T ++VL+AC HA L ++G+ +FDS+ V+ I P DHYA +I+LL
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564
Query: 471 GRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYI 530
RS A +I+SLP KP + IW LLS C + G+++ G +AA LF L P + G Y+
Sbjct: 565 CRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624
Query: 531 MLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYE 590
+LSNM+AA G+WE+VA +R M+ + VKK A SWIE++ +VH F+ +D +HPE E +Y
Sbjct: 625 LLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684
Query: 591 ELSKLIKKLQEAGFSPNTKLVLHDTQEE-EKVKSICYHSEKLALAYCLIKKPHGVTPIRI 649
L L K+++ G+ P+T VLHD + + K + HSEK+A+A+ L+K P G T IRI
Sbjct: 685 YLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTT-IRI 743
Query: 650 MKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
KN+R CGDCH F +F S ++ R IILRD RFHHF G CSC + W
Sbjct: 744 FKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 151/276 (54%), Gaps = 10/276 (3%)
Query: 9 QAIDTLYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHM----DLNFYEPNTTFLHNR 64
+ + + S G E Y ++ C ++L K++ +++ D +F+ N
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH------FDNS 325
Query: 65 LLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSY 124
L+ Y K GK AR +F+KMP +D++SWNALLS + SG + + + +F +M ++ +S+
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 125 NTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVV 184
I+G A GF E L++FS M+++ FEP DY A+ +CA L G+Q H +++
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 185 GNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDL 244
++ NAL MYAK G +++AR +F M + VSWN +I+ ++G + +D+
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 245 FQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLF 280
++EM G+ PD +T+ +L AC G +D + F
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/643 (37%), Positives = 370/643 (57%), Gaps = 37/643 (5%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D+ + L + +A+ V + R +FD+MP RD VS+NT +AG++ G +R AL++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
++ +P+ T VS L A + L + GK+IHG + V + AL DMYAK G ++
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC- 267
AR LFD M RN+VSWN MI Y++N PK+ + +FQ+M G+ P +V+V L AC
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 268 ----FQTGR------------------------------IDDAGRLFHVIKEKDNVCWTT 293
+ GR +D A +F ++ + V W
Sbjct: 349 DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNA 408
Query: 294 MIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLG 353
MI+G+ QNG+ DAL F++M S V+PD F+ SV+++ A+L+ +H + +HG +
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 354 VDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYD 413
+D ++ V++AL+DMY KCG A +F+MM R+V +WN+MI+GY +G AL L++
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 414 KLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRS 473
++ + +KP+ TF+SV+SAC H+ L E G F + + I S+DHY M++LLGR+
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 588
Query: 474 SDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLS 533
+++A D I +P KP ++ +L C + ++ E AA LFEL P + G +++L+
Sbjct: 589 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 648
Query: 534 NMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELS 593
N+Y A WE V +R SM + ++K S +EI N+VH F S HP+++ IY L
Sbjct: 649 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 708
Query: 594 KLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNI 653
KLI ++EAG+ P+T LVL + + K + + HSEKLA+++ L+ G T I + KN+
Sbjct: 709 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTT-IHVRKNL 766
Query: 654 RVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
RVC DCH K+ S + GR I++RD RFHHF G CSC D W
Sbjct: 767 RVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 243/489 (49%), Gaps = 78/489 (15%)
Query: 96 LLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPT 155
L+S R GSV + +F+ + + +V Y+T + GFA +ALQ F RM+ D EP
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 156 DYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFD 215
Y L C +LR GK+IHG +V ++F L +MYAK ++++AR +FD
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 216 RMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC-------- 267
RM R+LVSWN +++GY +NG + +++ + M L P +T+ ++L A
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 268 ---------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQ 300
+ G ++ A +LF + E++ V W +MI Y Q
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 301 NGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLV 360
N ++A+++F +ML E V+P S+ + +CA L L G+ +H +V LG+D ++ V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 361 SSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENL 420
++LI MYCKC D A ++F + +R +VSWN+MI G+AQNG+ ++AL + ++ +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 421 KPDSFTFVSVLSA--------------------CLHADLFER---------------GQN 445
KPD+FT+VSV++A CL ++F +
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 446 HFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPH---KPNSLIWSTLLSVC 502
FD +S H T + MI+ G A++L + + KPN + + +++S C
Sbjct: 495 IFDMMSERHVTT-----WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 503 AMKGDIKHG 511
+ G ++ G
Sbjct: 550 SHSGLVEAG 558
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 42/387 (10%)
Query: 157 YTHVSAL--NACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLF 214
Y H +AL C+ L +LR QI + L F + L ++ + G +D+A +F
Sbjct: 36 YEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVF 92
Query: 215 DRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC-----FQ 269
+ ++++ V ++ M+ G+ K K + F M+ + P + +L C +
Sbjct: 93 EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELR 152
Query: 270 TGR------------------------------IDDAGRLFHVIKEKDNVCWTTMIVGYT 299
G+ +++A ++F + E+D V W T++ GY+
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 300 QNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLL 359
QNG AL + M E+++P +I SV+ + + L + G+ +HG A+ G D +
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 360 VSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQEN 419
+S+AL+DMY KCG + A +F+ M RNVVSWNSMI+ Y QN EA+ ++ K+L E
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 420 LKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKA 479
+KP + + L AC ERG+ +S G+ ++ +I++ + +VD A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 480 VDLIKSLPHKPNSLIWSTLLSVCAMKG 506
+ L + + W+ ++ A G
Sbjct: 392 ASMFGKLQSR-TLVSWNAMILGFAQNG 417
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 165/366 (45%), Gaps = 44/366 (12%)
Query: 239 KKCIDLFQEMQLL------GLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWT 292
++C L + Q+L GL + + ++ + G +D+A R+F I K NV +
Sbjct: 45 ERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYH 104
Query: 293 TMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVL 352
TM+ G+ + + AL F M +DV P ++ + ++ C A L G+ +HG V
Sbjct: 105 TMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 353 GVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALY 412
G DL + L +MY KC ++A VF+ MP R++VSWN+++ GY+QNG AL +
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 413 DKLLQENLKPDSFTFVSVLSACLHADLFERGQ--------NHFDSISAVHGITPSLDHYA 464
+ +ENLKP T VSVL A L G+ + FDS+ V+ T +D YA
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL--VNISTALVDMYA 282
Query: 465 ------------------------CMINLLGRSSDVDKAVDLIKSLPH---KPNSLIWST 497
MI+ ++ + +A+ + + + KP +
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 498 LLSVCAMKGDIKHGEMAARHLFELE-PINAGPYIMLSNMYAACGRWEDVASIRSSMKSKN 556
L CA GD++ G + EL N L +MY C + AS+ ++S+
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 557 VKKFAA 562
+ + A
Sbjct: 403 LVSWNA 408
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/637 (36%), Positives = 375/637 (58%), Gaps = 35/637 (5%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
N+L++ + + G+V+ R LFDK ++ V++N+ I+G+A G EAL +F M+ +
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWL 213
++ + S + CA L +LR +Q+H +V + +R AL Y+K + A L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 214 FDRMNN-RNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC----- 267
F + N+VSW MISG+L+N ++ +DLF EM+ G+ P+E T S IL A
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 268 --------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQN 301
+ G++++A ++F I +KD V W+ M+ GY Q
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 302 GKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKL-ASLYHGQVVHGKAVVLGVDDDLLV 360
G+ E A+ +F E+ ++P++F+ SS+++ CA AS+ G+ HG A+ +D L V
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 361 SSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENL 420
SSAL+ MY K G + A VF +++VSWNSMI+GYAQ+GQ ++AL ++ ++ + +
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 421 KPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAV 480
K D TF+ V +AC HA L E G+ +FD + I P+ +H +CM++L R+ ++KA+
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 481 DLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACG 540
+I+++P+ S IW T+L+ C + + G +AA + ++P ++ Y++LSNMYA G
Sbjct: 653 KVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 712
Query: 541 RWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQ 600
W++ A +R M +NVKK YSWIE+ NK + F++ DR+HP + IY +L L +L+
Sbjct: 713 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Query: 601 EAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCH 660
+ G+ P+T VL D +E K + HSE+LA+A+ LI P G +P+ I+KN+RVCGDCH
Sbjct: 773 DLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKG-SPLLIIKNLRVCGDCH 831
Query: 661 LFMKFASDIIGRTIILRDSNRFHHFVG-GNCSCKDNW 696
L +K + I R I++RDSNRFHHF G CSC D W
Sbjct: 832 LVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 265/548 (48%), Gaps = 52/548 (9%)
Query: 14 LYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSG 73
L+ + E+Y L+ +R + AKRL ++ E + + + + +L A
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS-IFSSVLKVSATLC 107
Query: 74 KLFYARDLFDKMP----LRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIA 129
+ R L + L D+ +L+ + + + +D R +FD+M R+ V++ T I+
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 167
Query: 130 GFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGG 189
G+A + E L +F RMQ + +P +T +AL A+ RG Q+H +V L
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 190 NVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQ 249
+ V N+L ++Y K G + KAR LFD+ +++V+WN MISGY NG + + +F M+
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 250 LLGLNPDEVTVSNILGACFQTGRID----------------------------------- 274
L + E + ++++ C +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 275 DAGRLFHVIKEKDNVC-WTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSC 333
DA RLF I NV WT MI G+ QN +E+A+ LF+EM + VRP++F+ S ++++
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 334 AKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWN 393
++ VH + V + V +AL+D Y K G ++A VF+ + +++V+W+
Sbjct: 408 PVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 394 SMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAV 453
+M+ GYAQ G+ A+ ++ +L + +KP+ FTF S+L+ C + F +
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 454 HGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGE- 512
+ SL + ++ + + +++ A ++ K K + + W++++S G +HG+
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMIS-----GYAQHGQA 577
Query: 513 MAARHLFE 520
M A +F+
Sbjct: 578 MKALDVFK 585
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 205/497 (41%), Gaps = 96/497 (19%)
Query: 72 SGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGF 131
S +L+ A +LFDK P RD S+ +LL +R G Q
Sbjct: 40 SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQ------------------------ 75
Query: 132 ANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNV 191
EA ++F + + E S L A L D G+Q+H + + +V
Sbjct: 76 -------EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 192 FVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLL 251
V +L D Y KG R +FD M RN+V+W +ISGY +N + + LF MQ
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE 188
Query: 252 GLNPDEVTVSNILGAC-----------------------------------FQTGRIDDA 276
G P+ T + LG + G + A
Sbjct: 189 GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA 248
Query: 277 GRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKL 336
LF + K V W +MI GY NG + +AL +F M VR + S +SV+ CA L
Sbjct: 249 RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 337 ASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMP-TRNVVSWNSM 395
L + +H V G D + +AL+ Y KC DA +F + NVVSW +M
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 396 INGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC-------LHADL----FERGQ 444
I+G+ QN EA+ L+ ++ ++ ++P+ FT+ +L+A +HA + +ER
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSS 428
Query: 445 N----------HFDSISAVHGITPSLDH-----YACMINLLGRSSDVDKAVDLIKSLPH- 488
+ + +D ++ M+ ++ + + A+ + L
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 489 --KPNSLIWSTLLSVCA 503
KPN +S++L+VCA
Sbjct: 489 GIKPNEFTFSSILNVCA 505
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 187/419 (44%), Gaps = 72/419 (17%)
Query: 213 LFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGA------ 266
LFD+ R+ S+ ++ G+ ++G+ ++ LF + LG+ D S++L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 267 ----------CFQTGRIDDAG-------------------RLFHVIKEKDNVCWTTMIVG 297
C + G +DD ++F +KE++ V WTT+I G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 298 YTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDD 357
Y +N ++ L LF M +E +P+ F+ ++ + A+ G VH V G+D
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 358 LLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQ 417
+ VS++LI++Y KCG A +F+ ++VV+WNSMI+GYA NG DLEAL ++ +
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 418 ENLKPDSFTFVSVLSAC-----------LHADLFERG----QNHFDSISAVH-------- 454
++ +F SV+ C LH + + G QN ++ +
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 455 --------GITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHK---PNSLIWSTLLSVCA 503
G ++ + MI+ ++ ++AVDL + K PN +S +L+
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 504 MKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAA 562
+ I E+ A+ + ++ L + Y G+ E+ A + S + K++ ++A
Sbjct: 409 V---ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 7/251 (2%)
Query: 260 VSNILGACFQT---GRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLS 316
V+ + CF T R+ +A LF +D + +++ G++++G+ ++A LF +
Sbjct: 27 VAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR 86
Query: 317 EDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDD 376
+ D SSV+ A L G+ +H + + G DD+ V ++L+D Y K D
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 377 AWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLH 436
VF+ M RNVV+W ++I+GYA+N + E L L+ ++ E +P+SFTF + L
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 437 ADLFERG-QNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIW 495
+ RG Q H ++ +G+ ++ +INL + +V KA L K + + W
Sbjct: 207 EGVGGRGLQVH--TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTW 263
Query: 496 STLLSVCAMKG 506
++++S A G
Sbjct: 264 NSMISGYAANG 274
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 36/194 (18%)
Query: 65 LLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIR----D 120
LL YAK G + A ++F + +D++SWN+++S +A+ G +F +M R D
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 121 SVSYNTAIAGFANKGFSREALQVFSRMQKD-RFEPTD---------YTHVSALNACAQLL 170
V++ A + G E + F M +D + PT Y+ L +++
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 171 D-------------LRRGKQIHGKIVVGNLGGNVFVRNA---------LTDMYAKGGEID 208
+ + ++H K +G L + L++MYA+ G+
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715
Query: 209 KARWLFDRMNNRNL 222
+ + MN RN+
Sbjct: 716 ERAKVRKLMNERNV 729
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/639 (36%), Positives = 370/639 (57%), Gaps = 38/639 (5%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
N+L++ + + R +FD M RD +S+N+ IAG A G EA+ +F ++ + +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 154 PTDYTHVSALNACAQLLD-LRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARW 212
P YT S L A + L + L KQ+H + N + FV AL D Y++ + +A
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 213 LFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC----- 267
LF+R +N +LV+WN M++GY ++ K + LF M G D+ T++ + C
Sbjct: 474 LFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 268 ------------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVG 297
+ G + A F I D+V WTTMI G
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 298 YTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDD 357
+NG+EE A +F++M V PD+F+I+++ + + L +L G+ +H A+ L +D
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 358 LLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQ 417
V ++L+DMY KCG DDA+ +F + N+ +WN+M+ G AQ+G+ E L L+ ++
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 418 ENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVD 477
+KPD TF+ VLSAC H+ L H S+ +GI P ++HY+C+ + LGR+ V
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVK 772
Query: 478 KAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYA 537
+A +LI+S+ + ++ ++ TLL+ C ++GD + G+ A L ELEP+++ Y++LSNMYA
Sbjct: 773 QAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYA 832
Query: 538 ACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIK 597
A +W+++ R+ MK VKK +SWIE+ NK+H FV +DR++ +TE+IY ++ +I+
Sbjct: 833 AASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIR 892
Query: 598 KLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCG 657
+++ G+ P T L D +EEEK +++ YHSEKLA+A+ L+ P TPIR++KN+RVCG
Sbjct: 893 DIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPS-TPIRVIKNLRVCG 951
Query: 658 DCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
DCH MK+ + + R I+LRD+NRFH F G CSC D W
Sbjct: 952 DCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 35/389 (8%)
Query: 51 LNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLR 110
L F E FL N L+ Y+K G L YAR +FDKMP RD++SWN++L+A+A+S
Sbjct: 66 LTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSS------ 119
Query: 111 ALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLL 170
+ V N ++A +F +++D + T L C
Sbjct: 120 ---------ECVVENI-----------QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 171 DLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMIS 230
+ + HG L G+ FV AL ++Y K G++ + + LF+ M R++V WNLM+
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 231 GYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVC 290
YL+ G ++ IDL GLNP+E+T+ + +G DAG++ D
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI---SGDDSDAGQVKSFANGNDASS 276
Query: 291 WTTMIV------GYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQV 344
+ +I Y +G+ L F +M+ DV D+ + ++++ K+ SL GQ
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 345 VHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQ 404
VH A+ LG+D L VS++LI+MYCK A TVF+ M R+++SWNS+I G AQNG
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 405 DLEALALYDKLLQENLKPDSFTFVSVLSA 433
++EA+ L+ +LL+ LKPD +T SVL A
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 241/527 (45%), Gaps = 81/527 (15%)
Query: 60 FLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQ---DLRALF--- 113
F+ L++ Y K GK+ + LF++MP RD++ WN +L A+ G + DL + F
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 114 ----DKMPIR--DSVSYNTAIAG------------------FANKGFSR--------EAL 141
+++ +R +S + + AG F NKG S L
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALL 300
Query: 142 QVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMY 201
+ F+ M + E T + L ++ L G+Q+H + L + V N+L +MY
Sbjct: 301 KCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Query: 202 AKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVS 261
K + AR +FD M+ R+L+SWN +I+G +NG + + LF ++ GL PD+ T++
Sbjct: 361 CKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT 420
Query: 262 NILGAC--------------------------FQTGRIDDAGRLFHVIKEK--------- 286
++L A F + + DA +KE
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF 480
Query: 287 DNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVH 346
D V W M+ GYTQ+ L LF M + R D F++++V +C L ++ G+ VH
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 347 GKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDL 406
A+ G D DL VSS ++DMY KCG A F+ +P + V+W +MI+G +NG++
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 407 EALALYDKLLQENLKPDSFTFVSV--LSACLHADLFERG-QNHFDSISAVHGITPSLDHY 463
A ++ ++ + PD FT ++ S+CL A E+G Q H +++ P +
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA--LEQGRQIHANALKLNCTNDPFVG-- 656
Query: 464 ACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKH 510
++++ + +D A L K + N W+ +L A G+ K
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRI-EMMNITAWNAMLVGLAQHGEGKE 702
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 104/188 (55%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D+ + +L + + G + + FD +P+ D V++ T I+G G A VFS+M+
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
P ++T + A + L L +G+QIH + N + FV +L DMYAK G ID
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF 268
A LF R+ N+ +WN M+ G ++G+ K+ + LF++M+ LG+ PD+VT +L AC
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 269 QTGRIDDA 276
+G + +A
Sbjct: 731 HSGLVSEA 738
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/687 (35%), Positives = 401/687 (58%), Gaps = 10/687 (1%)
Query: 18 GQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFY 77
G A + +L+ C+ +++ ++ E N + + N L+ Y+++GKL
Sbjct: 84 GAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS-MCNSLIVMYSRNGKLEL 142
Query: 78 ARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPI----RDSVSYNTAIAGFAN 133
+R +F+ M R++ SWN++LS++ + G V D L D+M I D V++N+ ++G+A+
Sbjct: 143 SRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYAS 202
Query: 134 KGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFV 193
KG S++A+ V RMQ +P+ + S L A A+ L+ GK IHG I+ L +V+V
Sbjct: 203 KGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYV 262
Query: 194 RNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGL 253
L DMY K G + AR +FD M+ +N+V+WN ++SG K L M+ G+
Sbjct: 263 ETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGI 322
Query: 254 NPDEVTVSNILGACFQTGRIDDAGRLFHVIKEK----DNVCWTTMIVGYTQNGKEEDALI 309
PD +T +++ G+ + A + +KEK + V WT + G ++NG +AL
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK 382
Query: 310 LFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYC 369
+F +M E V P+ ++S+++ L+ L+ G+ VHG + + D V++AL+DMY
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYG 442
Query: 370 KCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVS 429
K G A +F + +++ SWN M+ GYA G+ E +A + +L+ ++PD+ TF S
Sbjct: 443 KSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 430 VLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHK 489
VLS C ++ L + G +FD + + +GI P+++H +CM++LLGRS +D+A D I+++ K
Sbjct: 503 VLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK 562
Query: 490 PNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIR 549
P++ IW LS C + D++ E+A + L LEP N+ Y+M+ N+Y+ RWEDV IR
Sbjct: 563 PDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIR 622
Query: 550 SSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTK 609
+ M++ V+ +SWI+ID VH F +E +THP+ IY EL KL+ +++++G+ P+T
Sbjct: 623 NLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTS 682
Query: 610 LVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDI 669
+ D + EK K + H+EKLA+ Y LIKK G+ PIR++KN +C D H K+ S +
Sbjct: 683 CIHQDISDSEKEKLLMGHTEKLAMTYGLIKKK-GLAPIRVVKNTNICSDSHTVAKYMSVL 741
Query: 670 IGRTIILRDSNRFHHFVGGNCSCKDNW 696
R I+L++ R HHF G CSC D+W
Sbjct: 742 RNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 214/468 (45%), Gaps = 108/468 (23%)
Query: 66 LHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYN 125
+ FY + L +A LFD+MP RD ++WN ++ + RSG+ +
Sbjct: 30 MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWE------------------ 71
Query: 126 TAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVG 185
+A+++F MQ + D T V L C+ G+QIHG ++
Sbjct: 72 -------------KAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL 118
Query: 186 NLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLF 245
L NV + N+L MY++ G+++ +R +F+ M +RNL SWN ++S Y K G I L
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 246 QEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEE 305
EM++ GL PD VT W +++ GY G +
Sbjct: 179 DEMEICGLKPDIVT-------------------------------WNSLLSGYASKGLSK 207
Query: 306 DALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALI 365
DA+ + M ++P SISS++ + A+ L G+ +HG + + D+ V + LI
Sbjct: 208 DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLI 267
Query: 366 DMYCKCGVTDDAWTVFNMMPTRNVVSWNSMING--YAQNGQDLEALALYDKLLQENLKPD 423
DMY K G A VF+MM +N+V+WNS+++G YA +D EAL + ++ +E +KPD
Sbjct: 268 DMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI--RMEKEGIKPD 325
Query: 424 SFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLI 483
+ T+ S+ S YA LG+ +KA+D+I
Sbjct: 326 AITWNSLASG-----------------------------YAT----LGKP---EKALDVI 349
Query: 484 KSLPHK---PNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGP 528
+ K PN + W+ + S C+ G+ ++ A + +++ GP
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRN---ALKVFIKMQEEGVGP 394
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 96/180 (53%)
Query: 254 NPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNE 313
N D VS +G + + A +LF + ++D++ W +++ ++G E A+ LF E
Sbjct: 20 NSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFRE 79
Query: 314 MLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGV 373
M + ++ ++ C+ G+ +HG + LG++ ++ + ++LI MY + G
Sbjct: 80 MQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK 139
Query: 374 TDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSA 433
+ + VFN M RN+ SWNS+++ Y + G +A+ L D++ LKPD T+ S+LS
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSG 199
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/693 (36%), Positives = 377/693 (54%), Gaps = 84/693 (12%)
Query: 87 LRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSR 146
+ ++ NAL++ ++R S+ D R +FD+M + D VS+N+ I +A G + AL++FSR
Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 147 MQKD-RFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGG 205
M + P + T V+ L CA L GKQ+H V + N+FV N L DMYAK G
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 206 EIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQ---------------- 249
+D+A +F M+ +++VSWN M++GY + G+ + + LF++MQ
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Query: 250 -----------------LL--GLNPDEVTVSNILGACFQTG------------------- 271
+L G+ P+EVT+ ++L C G
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398
Query: 272 -----------------------RIDDAGRLFHVI--KEKDNVCWTTMIVGYTQNGKEED 306
++D A +F + KE+D V WT MI GY+Q+G
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 307 ALILFNEMLSED--VRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDD-DLLVSSA 363
AL L +EM ED RP+ F+IS + +CA LA+L G+ +H A+ + L VS+
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNC 518
Query: 364 LIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPD 423
LIDMY KCG DA VF+ M +N V+W S++ GY +G EAL ++D++ + K D
Sbjct: 519 LIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLD 578
Query: 424 SFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLI 483
T + VL AC H+ + ++G +F+ + V G++P +HYAC+++LLGR+ ++ A+ LI
Sbjct: 579 GVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLI 638
Query: 484 KSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWE 543
+ +P +P ++W LS C + G ++ GE AA + EL + G Y +LSN+YA GRW+
Sbjct: 639 EEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWK 698
Query: 544 DVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAG 603
DV IRS M+ K VKK SW+E F D+THP + IY+ L ++++++ G
Sbjct: 699 DVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIG 758
Query: 604 FSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFM 663
+ P T LHD +EEK + HSEKLALAY ++ P G IRI KN+RVCGDCH
Sbjct: 759 YVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAA-IRITKNLRVCGDCHTAF 817
Query: 664 KFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
+ S II IILRDS+RFHHF G+CSCK W
Sbjct: 818 TYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 228/504 (45%), Gaps = 90/504 (17%)
Query: 96 LLSAHARSGSVQDLRALFDKMPIRDSVSY--NTAIAGFANKGFSREALQVFSRMQKDRFE 153
L+S + G + +L + P D+ Y N+ I + + G + + L +F M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWL 213
P +YT AC ++ +R G+ H +V NVFV NAL MY++ + AR +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 214 FDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEM-QLLGLNPDEVTVSNILGAC----- 267
FD M+ ++VSWN +I Y K G+PK +++F M G PD +T+ N+L C
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 268 ------------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVG 297
+ G +D+A +F + KD V W M+ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 298 YTQNGKEEDALILFN-----------------------------------EMLSEDVRPD 322
Y+Q G+ EDA+ LF +MLS ++P+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 323 KFSISSVVSSCAKLASLYHGQVVHGKAVVLGVD-------DDLLVSSALIDMYCKCGVTD 375
+ ++ SV+S CA + +L HG+ +H A+ +D D+ +V + LIDMY KC D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 376 DAWTVFNMMPT--RNVVSWNSMINGYAQNGQDLEALALYDKLLQENL--KPDSFTFVSVL 431
A +F+ + R+VV+W MI GY+Q+G +AL L ++ +E+ +P++FT L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 432 SACLHADLFERG-QNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKP 490
AC G Q H ++ P L C+I++ + + A + ++ K
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAK- 542
Query: 491 NSLIWSTLLSVCAMKGDIKHGEMA 514
N + W++L++ M G +GE A
Sbjct: 543 NEVTWTSLMTGYGMHG---YGEEA 563
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 180/378 (47%), Gaps = 52/378 (13%)
Query: 60 FLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIR 119
F+ N L+ YAK G + A +F M ++D++SWNA+++ +++ G +D LF+KM
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 120 ----DSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRG 175
D V+++ AI+G+A +G EAL V +M +P + T +S L+ CA + L G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 176 KQIHGKIVVGNL-------GGNVFVRNALTDMYAKGGEIDKARWLFDRMN--NRNLVSWN 226
K+IH + + G V N L DMYAK ++D AR +FD ++ R++V+W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 227 LMISGYLKNGQPKKCIDLFQEM--QLLGLNPDEVTVSNILGAC----------------- 267
+MI GY ++G K ++L EM + P+ T+S L AC
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 268 -------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDAL 308
+ G I DA +F + K+ V WT+++ GY +G E+AL
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 309 ILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHG-QVVHGKAVVLGVDDDLLVSSALIDM 367
+F+EM + D ++ V+ +C+ + G + + V GV + L+D+
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 368 YCKCGVTDDAWTVFNMMP 385
+ G + A + MP
Sbjct: 625 LGRAGRLNAALRLIEEMP 642
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 30 VLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRD 89
++ C + + + K++ ++ N F+ N L+ YAK G + AR +FD M ++
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 90 IISWNALLSAHARSGSVQDLRALFDKMP----IRDSVSYNTAIAGFANKGFSREALQVFS 145
++W +L++ + G ++ +FD+M D V+ + ++ G + ++ F+
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 146 RMQ 148
RM+
Sbjct: 604 RMK 606
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/659 (36%), Positives = 379/659 (57%), Gaps = 14/659 (2%)
Query: 49 MDLNFYEPN-TTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNAL----LSAHARS 103
++L+ P T FL ++L Y L R + ++ L D+ ++L + A+A
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 104 GSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSAL 163
V R +FD++P R+ + N I + N GF E ++VF M P YT L
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 164 NACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLV 223
AC+ + G++IHG L +FV N L MY K G + +AR + D M+ R++V
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 224 SWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTG--RIDDAGRLFH 281
SWN ++ GY +N + +++ +EM+ + ++ D T++++L A T + +F
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 282 VIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYH 341
+ +K V W MI Y +N +A+ L++ M ++ PD SI+SV+ +C ++L
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 342 GQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQ 401
G+ +HG + +LL+ +ALIDMY KCG + A VF M +R+VVSW +MI+ Y
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 402 NGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLD 461
+G+ +A+AL+ KL L PDS FV+ L+AC HA L E G++ F ++ + ITP L+
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 447
Query: 462 HYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFEL 521
H ACM++LLGR+ V +A I+ + +PN +W LL C + D G +AA LF+L
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQL 507
Query: 522 EPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRT 581
P +G Y++LSN+YA GRWE+V +IR+ MKSK +KK S +E++ +H F+ DR+
Sbjct: 508 APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRS 567
Query: 582 HPETEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLI--- 638
HP+++ IY EL L+KK++E G+ P+++ LHD +EE+K + HSEKLA+ + L+
Sbjct: 568 HPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTK 627
Query: 639 -KKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
++ IRI KN+R+CGDCH+ K S I R II+RD+NRFH F G CSC D W
Sbjct: 628 EEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 14 LYSRGQAATEE----AYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFY 69
LYSR +A E + T ++ C + + L K++ +++ PN L N L+ Y
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL-LLENALIDMY 354
Query: 70 AKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMP----IRDSVSYN 125
AK G L ARD+F+ M RD++SW A++SA+ SG D ALF K+ + DS+++
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFV 414
Query: 126 TAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSA-LNACAQLLDL--RRGK 176
T +A ++ G E F M TD+ ++ L A ++DL R GK
Sbjct: 415 TTLAACSHAGLLEEGRSCFKLM-------TDHYKITPRLEHLACMVDLLGRAGK 461
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 30/262 (11%)
Query: 42 AKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIIS----WNALL 97
A L S M+ + +EP+ + + +L + L + + + + +I NAL+
Sbjct: 293 AVELYSRMEADGFEPDAVSITS-VLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 98 SAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDY 157
+A+ G ++ R +F+ M RD VS+ I+ + G +A+ +FS++Q P
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 158 THVSALNACAQLLDLRRGKQI------HGKIV--VGNLGGNVFVRNALTDMYAKGGEIDK 209
V+ L AC+ L G+ H KI + +L + D+ + G++ +
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA-------CMVDLLGRAGKVKE 464
Query: 210 A-RWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDE----VTVSNIL 264
A R++ D N W ++ + I L +L L P++ V +SNI
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTD--IGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 265 GACFQTGRIDDAGRLFHVIKEK 286
+ GR ++ + +++K K
Sbjct: 523 A---KAGRWEEVTNIRNIMKSK 541
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/640 (38%), Positives = 363/640 (56%), Gaps = 38/640 (5%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
N L++ +++ + R + P R+ VS+ + I+G A G AL F M+++
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWL 213
P D+T A A A L GKQIH V +VFV + DMY K D AR L
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 214 FDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC------ 267
FD + RNL +WN IS + +G+P++ I+ F E + + +P+ +T L AC
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 268 --------------FQT------GRIDDAGR---------LFHVIKEKDNVCWTTMIVGY 298
F T G ID G+ +F + K+ V W +++ Y
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAY 285
Query: 299 TQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDL 358
QN ++E A +L+ + V F ISSV+S+CA +A L G+ +H AV V+ +
Sbjct: 286 VQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI 345
Query: 359 LVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQE 418
V SAL+DMY KCG +D+ F+ MP +N+V+ NS+I GYA GQ ALAL++++
Sbjct: 346 FVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405
Query: 419 NL--KPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDV 476
P+ TFVS+LSAC A E G FDS+ + +GI P +HY+C++++LGR+ V
Sbjct: 406 GCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 477 DKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMY 536
++A + IK +P +P +W L + C M G + G +AA +LF+L+P ++G +++LSN +
Sbjct: 466 ERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTF 525
Query: 537 AACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLI 596
AA GRW + ++R +K +KK A YSWI + N+VH F ++DR+H + I L+KL
Sbjct: 526 AAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLR 585
Query: 597 KKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVC 656
+++ AG+ P+ KL L+D +EEEK + +HSEKLALA+ L+ P V PIRI KN+R+C
Sbjct: 586 NEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSV-PIRITKNLRIC 644
Query: 657 GDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
GDCH F KF S + R II+RD+NRFH F G CSCKD W
Sbjct: 645 GDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 363/651 (55%), Gaps = 39/651 (5%)
Query: 82 FDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREAL 141
FD P + N LL ++ + LF+++P +DSV++NT I G+ G E++
Sbjct: 178 FDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 142 QVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMY 201
+F +M++ +P+D+T L A L D G+Q+H V + V N + D Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 202 AKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVS 261
+K + + R LFD M + VS+N++IS Y + Q + + F+EMQ +G + +
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 262 NILG-----ACFQTGR------------------------------IDDAGRLFHVIKEK 286
+L + Q GR ++A +F + ++
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 287 DNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVH 346
V WT +I GY Q G L LF +M ++R D+ + ++V+ + A ASL G+ +H
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 347 GKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDL 406
+ G +++ S L+DMY KCG DA VF MP RN VSWN++I+ +A NG
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 407 EALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACM 466
A+ + K+++ L+PDS + + VL+AC H E+G +F ++S ++GITP HYACM
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 467 INLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPI-N 525
++LLGR+ +A L+ +P +P+ ++WS++L+ C + + E AA LF +E + +
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 526 AGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPET 585
A Y+ +SN+YAA G WE V ++ +M+ + +KK AYSW+E+++K+H F S D+THP
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 586 EIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVT 645
+ I ++++L +++ G+ P+T V+ D E+ K++S+ YHSE+LA+A+ LI P G
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGC- 774
Query: 646 PIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
PI +MKN+R C DCH +K S I+ R I +RD++RFHHF G CSC D W
Sbjct: 775 PIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 226/484 (46%), Gaps = 46/484 (9%)
Query: 71 KSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAG 130
+ G++ AR ++D+MP ++ +S N ++S H ++G V R LFD MP R V++ +
Sbjct: 60 RRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGW 119
Query: 131 FANKGFSREALQVFSRMQKDR--FEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLG 188
+A EA ++F +M + P T + L C + Q+H V
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 189 GNVF--VRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQ 246
N F V N L Y + +D A LF+ + ++ V++N +I+GY K+G + I LF
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 247 EMQLLGLNPDEVTVSNILGAC-----FQTG------------------------------ 271
+M+ G P + T S +L A F G
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 272 RIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVS 331
R+ + LF + E D V + +I Y+Q + E +L F EM F ++++S
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 332 SCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVS 391
A L+SL G+ +H +A++ D L V ++L+DMY KC + ++A +F +P R VS
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS 419
Query: 392 WNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLH-ADLFERGQNHFDSI 450
W ++I+GY Q G L L+ K+ NL+ D TF +VL A A L Q H I
Sbjct: 420 WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 451 SAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKH 510
+ G ++ + ++++ + + AV + + +P + N++ W+ L+S A GD
Sbjct: 480 RS--GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGD--- 533
Query: 511 GEMA 514
GE A
Sbjct: 534 GEAA 537
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 170/412 (41%), Gaps = 79/412 (19%)
Query: 167 AQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWN 226
A LD RR + +I+ + N + + + G++ AR ++D M ++N VS N
Sbjct: 27 ATFLDTRR---VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTN 83
Query: 227 LMISGYLKNGQPKKCIDLFQEMQ---------LLGLN----------------------- 254
MISG++K G DLF M L+G
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 255 -PDEVTVSNILGAC--------------------FQTG-----------------RIDDA 276
PD VT + +L C F T R+D A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 277 GRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKL 336
LF I EKD+V + T+I GY ++G +++ LF +M +P F+ S V+ + L
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 337 ASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMI 396
GQ +H +V G D V + ++D Y K + +F+ MP + VS+N +I
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 397 NGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERG-QNHFDSISAVHG 455
+ Y+Q Q +L + ++ +F F ++LS + + G Q H ++ A
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT-- 381
Query: 456 ITPSLDHYA-CMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKG 506
S+ H ++++ + ++A + KSLP + ++ W+ L+S KG
Sbjct: 382 -ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR-TTVSWTALISGYVQKG 431
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 103/260 (39%), Gaps = 65/260 (25%)
Query: 60 FLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKM--- 116
F + L+ YAK G + A +F++MP R+ +SWNAL+SAHA +G + F KM
Sbjct: 488 FSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIES 547
Query: 117 ---PIRDSVSYNTAIAGFANKGFSREALQVFSRMQ------------------------- 148
P DSVS + ++ GF + + F M
Sbjct: 548 GLQP--DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 149 --------KDRFEPTDYTHVSALNACA----QLLDLRRGKQIHGKIVVGNLGGNVFVRNA 196
+ FEP + S LNAC Q L R +++ + + V +
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV----S 661
Query: 197 LTDMYAKGGEIDKARWLFDRMNNRNL-----VSW---NLMISGYLKNGQP--------KK 240
++++YA GE +K R + M R + SW N I + N Q +K
Sbjct: 662 MSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRK 721
Query: 241 CIDLFQEMQLLGLNPDEVTV 260
+L E++ G PD +V
Sbjct: 722 INELTAEIEREGYKPDTSSV 741
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/711 (34%), Positives = 386/711 (54%), Gaps = 41/711 (5%)
Query: 25 AYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDK 84
Y L+ ++ E A L M L+ EP++ L + ++ A G LF + L
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA-DGTLFRGQQLHAY 414
Query: 85 MPLRDIISWN----ALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREA 140
S N ALL+ +A+ ++ F + + + V +N + + R +
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 141 LQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDM 200
++F +MQ + P YT+ S L C +L DL G+QIH +I+ N N +V + L DM
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM 534
Query: 201 YAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTV 260
YAK G++D A + R +++VSW MI+GY + K + F++M G+ DEV +
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 261 SNILGAC--------------------------FQT---------GRIDDAGRLFHVIKE 285
+N + AC FQ G+I+++ F +
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 286 KDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVV 345
DN+ W ++ G+ Q+G E+AL +F M E + + F+ S V + ++ A++ G+ V
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 346 HGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQD 405
H G D + V +ALI MY KCG DA F + T+N VSWN++IN Y+++G
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 406 LEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYAC 465
EAL +D+++ N++P+ T V VLSAC H L ++G +F+S+++ +G++P +HY C
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVC 834
Query: 466 MINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPIN 525
++++L R+ + +A + I+ +P KP++L+W TLLS C + +++ GE AA HL ELEP +
Sbjct: 835 VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 894
Query: 526 AGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPET 585
+ Y++LSN+YA +W+ R MK K VKK SWIE+ N +H F D+ HP
Sbjct: 895 SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLA 954
Query: 586 EIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVT 645
+ I+E L K+ E G+ + +L++ Q E+K I HSEKLA+++ L+ P V
Sbjct: 955 DEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV- 1013
Query: 646 PIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
PI +MKN+RVC DCH ++KF S + R II+RD+ RFHHF GG CSCKD W
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 218/467 (46%), Gaps = 40/467 (8%)
Query: 77 YARDLFDKMPLRD-IISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKG 135
+AR L+ LRD + N L+ ++R+G V R +FD + ++D S+ I+G +
Sbjct: 210 HARILYQG--LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 136 FSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRN 195
EA+++F M PT Y S L+AC ++ L G+Q+HG ++ + +V N
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 196 ALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNP 255
AL +Y G + A +F M+ R+ V++N +I+G + G +K ++LF+ M L GL P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 256 DEVTVSNILGACFQTGR-----------------------------------IDDAGRLF 280
D T+++++ AC G I+ A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 281 HVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLY 340
+ ++ V W M+V Y ++ +F +M E++ P++++ S++ +C +L L
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 341 HGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYA 400
G+ +H + + + V S LIDMY K G D AW + ++VVSW +MI GY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 401 QNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSL 460
Q D +AL + ++L ++ D + +SAC + GQ + + V G + L
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFSSDL 626
Query: 461 DHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGD 507
++ L R ++++ L +++ W+ L+S G+
Sbjct: 627 PFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGN 672
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 194/427 (45%), Gaps = 42/427 (9%)
Query: 112 LFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNAC-AQLL 170
+FD+MP R ++N I A++ E +F RM + P + T L AC +
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 171 DLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMIS 230
+QIH +I+ L + V N L D+Y++ G +D AR +FD + ++ SW MIS
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 231 GYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC----------------------- 267
G KN + I LF +M +LG+ P S++L AC
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 268 ------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEML 315
F G + A +F + ++D V + T+I G +Q G E A+ LF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 316 SEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTD 375
+ + PD +++S+V +C+ +L+ GQ +H LG + + AL+++Y KC +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 376 DAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACL 435
A F NVV WN M+ Y + ++ ++ E + P+ +T+ S+L C+
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 436 HADLFERGQNHFDSISAVHGITPSLDHYAC--MINLLGRSSDVDKAVDLIKSLPHKPNSL 493
E G+ I + L+ Y C +I++ + +D A D++ K + +
Sbjct: 502 RLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVV 557
Query: 494 IWSTLLS 500
W+T+++
Sbjct: 558 SWTTMIA 564
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 203/475 (42%), Gaps = 76/475 (16%)
Query: 172 LRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISG 231
L G+++H +I+ L N + L D Y G++ A +FD M R + +WN MI
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 232 YLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC------------------------ 267
+ LF M + P+E T S +L AC
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 268 ------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEML 315
+ G +D A R+F ++ KD+ W MI G ++N E +A+ LF +M
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 316 SEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTD 375
+ P ++ SSV+S+C K+ SL G+ +HG + LG D V +AL+ +Y G
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 376 DAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACL 435
A +F+ M R+ V++N++ING +Q G +A+ L+ ++ + L+PDS T S++ AC
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 436 HADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVD-------------- 481
RGQ + + G + ++NL + +D++ A+D
Sbjct: 401 ADGTLFRGQ-QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 482 -------LIKSLPHK-------------PNSLIWSTLLSVCAMKGDIKHGEMAARHLFEL 521
L+ L + PN + ++L C GD++ GE + +
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 522 E-PINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKF----AAYSWIEIDNK 571
+NA +L +MYA G+ + I K+V + A Y+ D+K
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK 574
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 148/318 (46%), Gaps = 26/318 (8%)
Query: 219 NRNLVSWNLMISGYLK-NGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAG 277
N + W ++ G LK NG + L ++ LGL+ + + G + A
Sbjct: 83 NHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 278 RLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLA 337
++F + E+ W MI + LF M+SE+V P++ + S V+ +C +
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 338 SLYH-GQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMI 396
+ + +H + + G+ D +V + LID+Y + G D A VF+ + ++ SW +MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 397 NGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGI 456
+G ++N + EA+ L+ + + P + F SVLSAC + E G+ +HG+
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ-------LHGL 313
Query: 457 TPSL----DHYAC--MINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKH 510
L D Y C +++L ++ A + ++ + +++ ++TL++ + G +
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCG---Y 369
Query: 511 GEMAAR-----HLFELEP 523
GE A HL LEP
Sbjct: 370 GEKAMELFKRMHLDGLEP 387
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 319 VRPDKFSISSVVSSCAKL-ASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDA 377
+RP+ ++ ++ C K SL G+ +H + + LG+D + +S L D Y G A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 378 WTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHA 437
+ VF+ MP R + +WN MI A E L+ +++ EN+ P+ TF VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC--- 196
Query: 438 DLFERGQNHFDSISAVH------GITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPN 491
G FD + +H G+ S +I+L R+ VD A + L K +
Sbjct: 197 ---RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 492 SLIWSTLLS 500
S W ++S
Sbjct: 254 S-SWVAMIS 261
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/638 (35%), Positives = 357/638 (55%), Gaps = 39/638 (6%)
Query: 96 LLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPT 155
L+ A + G + R +FD +P +N I G++ ++AL ++S MQ R P
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 156 DYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFD 215
+T L AC+ L L+ G+ +H ++ +VFV+N L +YAK + AR +F+
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 216 --RMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGA--CFQ-- 269
+ R +VSW ++S Y +NG+P + +++F +M+ + + PD V + ++L A C Q
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 270 -------------------------------TGRIDDAGRLFHVIKEKDNVCWTTMIVGY 298
G++ A LF +K + + W MI GY
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 299 TQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDL 358
+NG +A+ +F+EM+++DVRPD SI+S +S+CA++ SL + ++ DD+
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 359 LVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQE 418
+SSALIDM+ KCG + A VF+ R+VV W++MI GY +G+ EA++LY + +
Sbjct: 359 FISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 419 NLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDK 478
+ P+ TF+ +L AC H+ + G F+ + A H I P HYAC+I+LLGR+ +D+
Sbjct: 419 GVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQ 477
Query: 479 AVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAA 538
A ++IK +P +P +W LLS C ++ GE AA+ LF ++P N G Y+ LSN+YAA
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAA 537
Query: 539 CGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKK 598
W+ VA +R MK K + K SW+E+ ++ F D++HP E I ++ + +
Sbjct: 538 ARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESR 597
Query: 599 LQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGD 658
L+E GF N LHD +EE +++C HSE++A+AY LI P G TP+RI KN+R C +
Sbjct: 598 LKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQG-TPLRITKNLRACVN 656
Query: 659 CHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
CH K S ++ R I++RD+NRFHHF G CSC D W
Sbjct: 657 CHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 161/314 (51%), Gaps = 41/314 (13%)
Query: 176 KQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKN 235
KQIH +++V L + F+ L + G+I AR +FD + + WN +I GY +N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 236 GQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC----------------FQTG-------- 271
+ + ++ MQL ++PD T ++L AC F+ G
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 272 -----------RIDDAGRLFH--VIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSED 318
R+ A +F + E+ V WT ++ Y QNG+ +AL +F++M D
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 319 VRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLG--VDDDLLVSSALIDMYCKCGVTDD 376
V+PD ++ SV+++ L L G+ +H V +G ++ DLL+S L MY KCG
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS--LNTMYAKCGQVAT 275
Query: 377 AWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLH 436
A +F+ M + N++ WN+MI+GYA+NG EA+ ++ +++ ++++PD+ + S +SAC
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 437 ADLFERGQNHFDSI 450
E+ ++ ++ +
Sbjct: 336 VGSLEQARSMYEYV 349
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 10/262 (3%)
Query: 250 LLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALI 309
+LGL ++ ++ A G I A ++F + W +I GY++N +DAL+
Sbjct: 46 VLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALL 105
Query: 310 LFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYC 369
+++ M V PD F+ ++ +C+ L+ L G+ VH + LG D D+ V + LI +Y
Sbjct: 106 MYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYA 165
Query: 370 KCGVTDDAWTVFN--MMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTF 427
KC A TVF +P R +VSW ++++ YAQNG+ +EAL ++ ++ + ++KPD
Sbjct: 166 KCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVAL 225
Query: 428 VSVLSA--CLHADLFERGQNHFDSISAVHGITPS-LDHYACMINLLGRSSDVDKAVDLIK 484
VSVL+A CL DL + H + I P L M G+ + D +K
Sbjct: 226 VSVLNAFTCLQ-DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 485 SLPHKPNSLIWSTLLSVCAMKG 506
S PN ++W+ ++S A G
Sbjct: 285 S----PNLILWNAMISGYAKNG 302
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 114/192 (59%), Gaps = 3/192 (1%)
Query: 90 IISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQK 149
+IS N + +A+ G V + LFDKM + + +N I+G+A G++REA+ +F M
Sbjct: 260 LISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 150 DRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDK 209
P + SA++ACAQ+ L + + ++ + + +VF+ +AL DM+AK G ++
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 210 ARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQ 269
AR +FDR +R++V W+ MI GY +G+ ++ I L++ M+ G++P++VT +L AC
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 270 TGRIDDAGRLFH 281
+G + + F+
Sbjct: 437 SGMVREGWWFFN 448
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 319 VRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAW 378
+ D F +S++ S A L + +H + +VLG+ + + LI G A
Sbjct: 18 IHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR 73
Query: 379 TVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC---- 434
VF+ +P + WN++I GY++N +AL +Y + + PDSFTF +L AC
Sbjct: 74 QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 435 -------LHADLFERG-------QN----------HFDSISAVHGITP----SLDHYACM 466
+HA +F G QN S V P ++ + +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 467 INLLGRSSDVDKAVDL---IKSLPHKPNSLIWSTLLSVCAMKGDIKHGE----MAARHLF 519
++ ++ + +A+++ ++ + KP+ + ++L+ D+K G +
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 520 ELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNV 557
E+EP I L+ MYA CG+ + MKS N+
Sbjct: 254 EIEP---DLLISLNTMYAKCGQVATAKILFDKMKSPNL 288
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 11/206 (5%)
Query: 70 AKSGKLFYARDLFDKMPLRD----IISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYN 125
A+ G L AR +++ + D + +AL+ A+ GSV+ R +FD+ RD V ++
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 126 TAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVG 185
I G+ G +REA+ ++ M++ P D T + L AC +R G ++
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH 453
Query: 186 NLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVS-WNLMISGYLKNGQPKKCIDL 244
+ + D+ + G +D+A + M + V+ W ++S K+ + +
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE--LGE 511
Query: 245 FQEMQLLGLNPDE----VTVSNILGA 266
+ QL ++P V +SN+ A
Sbjct: 512 YAAQQLFSIDPSNTGHYVQLSNLYAA 537
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/642 (36%), Positives = 372/642 (57%), Gaps = 46/642 (7%)
Query: 57 NTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGS-VQDLRALFDK 115
+ F N+++ +SG + A +F M ++ I+WN+LL ++ S + + LFD+
Sbjct: 59 DQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDE 118
Query: 116 MPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRG 175
+P D+ SYN ++ + +A F RM + ++ N
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM--------PFKDAASWNT---------- 160
Query: 176 KQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKN 235
++ G YA+ GE++KAR LF M +N VSWN MISGY++
Sbjct: 161 ------MITG---------------YARRGEMEKARELFYSMMEKNEVSWNAMISGYIEC 199
Query: 236 GQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFH-VIKEKDNVCWTTM 294
G +K F+ + G+ V + ++ + +++ A +F + K+ V W M
Sbjct: 200 GDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255
Query: 295 IVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGV 354
I GY +N + ED L LF ML E +RP+ +SS + C++L++L G+ +H +
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 355 DDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDK 414
+D+ ++LI MYCKCG DAW +F +M ++VV+WN+MI+GYAQ+G +AL L+ +
Sbjct: 316 CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFRE 375
Query: 415 LLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSS 474
++ ++PD TFV+VL AC HA L G +F+S+ + + P DHY CM++LLGR+
Sbjct: 376 MIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAG 435
Query: 475 DVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSN 534
+++A+ LI+S+P +P++ ++ TLL C + +++ E AA L +L NA Y+ L+N
Sbjct: 436 KLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLAN 495
Query: 535 MYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSK 594
+YA+ RWEDVA +R MK NV K YSWIEI NKVH F S DR HPE + I+++L +
Sbjct: 496 IYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKE 555
Query: 595 LIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIR 654
L KK++ AG+ P + LH+ +EE+K K + +HSEKLA+A+ IK P G + I++ KN+R
Sbjct: 556 LEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG-SQIQVFKNLR 614
Query: 655 VCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
+CGDCH +KF S+I R II+RD+ RFHHF G+CSC D W
Sbjct: 615 ICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 202/435 (46%), Gaps = 60/435 (13%)
Query: 28 QLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPL 87
+++ C R D++ A R+ M NT ++ L+ ++ A LFD++P
Sbjct: 66 KIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 88 RDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRM 147
D S+N +LS + R+ + + ++ FD+MP +D+ S+NT I G+A +G +A ++F M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 148 QKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEI 207
E + + + ++ + DL + V + G V A+ Y K ++
Sbjct: 182 ----MEKNEVSWNAMISGYIECGDLEKASHF---FKVAPVRG-VVAWTAMITGYMKAKKV 233
Query: 208 DKARWLFDRMN-NRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGA 266
+ A +F M N+NLV+WN MISGY++N +P+ + LF+ M G+ P+ +S+ L
Sbjct: 234 ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 267 C-----FQTGR------------------------------IDDAGRLFHVIKEKDNVCW 291
C Q GR + DA +LF V+K+KD V W
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 292 TTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVV 351
MI GY Q+G + AL LF EM+ +RPD + +V+ +C + G V G A
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN-----HAGLVNIGMAYF 408
Query: 352 LGVDDDLLVS------SALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQD 405
+ D V + ++D+ + G ++A + MP R + + G + ++
Sbjct: 409 ESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKN 468
Query: 406 LE-ALALYDKLLQEN 419
+E A +KLLQ N
Sbjct: 469 VELAEFAAEKLLQLN 483
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 13 TLYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKS 72
+ G + +L C+ ++ ++L +++ + + + T L L+ Y K
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL-TSLISMYCKC 332
Query: 73 GKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKM---PIR-DSVSYNTAI 128
G+L A LF+ M +D+++WNA++S +A+ G+ LF +M IR D +++ +
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Query: 129 AGFANKGFSREALQVFSRMQKD-RFEP 154
+ G + F M +D + EP
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEP 419
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/636 (37%), Positives = 356/636 (55%), Gaps = 47/636 (7%)
Query: 105 SVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALN 164
S ++ +FDKM + V++ I GF REA++ F M FE +T S +
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 165 ACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAK---GGEIDKARWLFDRMNNRN 221
ACA+L +L GKQ+H + L +V +L DMYAK G +D R +FDRM + +
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 222 LVSWNLMISGYLKNGQ-PKKCIDLFQEMQLLG-LNPDEVTVSN----------------I 263
++SW +I+GY+KN + I+LF EM G + P+ T S+ +
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 264 LGACFQTG-------------------RIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKE 304
LG F+ G R++DA R F + EK+ V + T + G +N
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 305 EDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSAL 364
E A L +E+ ++ F+ +S++S A + S+ G+ +H + V LG+ + V +AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 365 IDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDS 424
I MY KCG D A VFN M RNV+SW SMI G+A++G + L ++++++E +KP+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 425 FTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIK 484
T+V++LSAC H L G HF+S+ H I P ++HYACM++LL R+ + A + I
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 485 SLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWED 544
++P + + L+W T L C + + + G++AAR + EL+P YI LSN+YA G+WE+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 545 VASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGF 604
+R MK +N+ K SWIE+ +K+HKF D HP IY+EL +LI +++ G+
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 605 SPNTKLVLHD----TQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCH 660
P+T LVLH E EK + + HSEK+A+A+ LI P+R+ KN+RVCGDCH
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKS-RPVRVFKNLRVCGDCH 814
Query: 661 LFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
MK+ S + GR I+LRD NRFHHF G CSC D W
Sbjct: 815 NAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 245/530 (46%), Gaps = 82/530 (15%)
Query: 25 AYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDK 84
++ L+ C R D L K + + + EP++ L+N L+ Y+KSG A D+F+
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV-LYNSLISLYSKSGDSAKAEDVFET 122
Query: 85 MPL---RDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREAL 141
M RD++SW+A++ A + N G +A+
Sbjct: 123 MRRFGKRDVVSWSAMM-------------------------------ACYGNNGRELDAI 151
Query: 142 QVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIV-VGNLGGNVFVRNALTDM 200
+VF + P DY + + + AC+ + G+ G ++ G+ +V V +L DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 201 YAKG-GEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVT 259
+ KG + A +FD+M+ N+V+W LMI+ ++ G P++ I F +M L G D+ T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 260 VSNILGACFQT------------------------------------GRIDDAGRLFHVI 283
+S++ AC + G +DD ++F +
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 284 KEKDNVCWTTMIVGYTQNGK-EEDALILFNEMLSED-VRPDKFSISSVVSSCAKLASLYH 341
++ + WT +I GY +N +A+ LF+EM+++ V P+ F+ SS +C L+
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 342 GQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQ 401
G+ V G+A G+ + V++++I M+ K +DA F + +N+VS+N+ ++G +
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 402 NGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLD 461
N +A L ++ + L +FTF S+LS + +G+ + + G++ +
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL-GLSCNQP 510
Query: 462 HYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHG 511
+I++ + +D A + + ++ N + W+++++ G KHG
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENR-NVISWTSMIT-----GFAKHG 554
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 176/376 (46%), Gaps = 50/376 (13%)
Query: 104 GSVQDLRALFDKMPIRDSVSYNTAIAGF-ANKGFSREALQVFSRM-QKDRFEPTDYTHVS 161
GSV D R +FD+M +S+ I G+ N + EA+ +FS M + EP +T S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 162 ALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRN 221
A AC L D R GKQ+ G+ L N V N++ M+ K ++ A+ F+ ++ +N
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 222 LVSWNLMISGYLKN-----------------------------------GQPKKCIDLFQ 246
LVS+N + G +N G +K +
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 247 EMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEED 306
++ LGL+ ++ + ++ + G ID A R+F+ ++ ++ + WT+MI G+ ++G
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIR 558
Query: 307 ALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVS----- 361
L FN+M+ E V+P++ + +++S+C+ + G V G + +D +
Sbjct: 559 VLETFNQMIEEGVKPNEVTYVAILSACSHV-----GLVSEGWRHFNSMYEDHKIKPKMEH 613
Query: 362 -SALIDMYCKCGVTDDAWTVFNMMPTR-NVVSWNSMING-YAQNGQDLEALALYDKLLQE 418
+ ++D+ C+ G+ DA+ N MP + +V+ W + + + +L LA L +
Sbjct: 614 YACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELD 673
Query: 419 NLKPDSFTFVSVLSAC 434
+P ++ +S + AC
Sbjct: 674 PNEPAAYIQLSNIYAC 689
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
N+++S +S ++D + F+ + ++ VSYNT + G +A ++ S + +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWL 213
+ +T S L+ A + +R+G+QIH ++V L N V NAL MY+K G ID A +
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 214 FDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRI 273
F+ M NRN++SW MI+G+ K+G + ++ F +M G+ P+EVT IL AC G +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 274 DDAGRLFHVIKE 285
+ R F+ + E
Sbjct: 592 SEGWRHFNSMYE 603
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 206/499 (41%), Gaps = 94/499 (18%)
Query: 115 KMPIRD--SVSYNTAIAG-----FANKGFSREALQVFSRMQKDRFEPTD-YTHVSALNAC 166
K+PI+ SVS +A N G R A+ M +D P D T S L +C
Sbjct: 13 KLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSC 72
Query: 167 AQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWN 226
+ D R GK +H +++ ++ E D V +N
Sbjct: 73 IRARDFRLGKLVHARLIEFDI------------------EPDS-------------VLYN 101
Query: 227 LMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEK 286
+IS Y K+G K D+F+ M+ G ++
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFG--------------------------------KR 129
Query: 287 DNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVH 346
D V W+ M+ Y NG+E DA+ +F E L + P+ + ++V+ +C+ + G+V
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 347 GKAVVLG-VDDDLLVSSALIDMYCKCGVT-DDAWTVFNMMPTRNVVSWNSMINGYAQNGQ 404
G + G + D+ V +LIDM+ K + ++A+ VF+ M NVV+W MI Q G
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 405 DLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYA 464
EA+ + ++ + D FT SV SAC + G+ S + G+ +D
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK-QLHSWAIRSGL---VDDVE 305
Query: 465 CMINLLGRSSDVDKAVDLIKSLPHKPNS---LIWSTLLSVCAMKGDIKHGEMA--ARHLF 519
C + + D +VD + + + + W+ L++ G +K+ +A A +LF
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT-----GYMKNCNLATEAINLF 360
Query: 520 ELEPINAG----PYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKF 575
E I G + S+ + ACG D + + + A+ S + ++ + F
Sbjct: 361 S-EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA-NSVISMF 418
Query: 576 VSEDRTHPETEIIYEELSK 594
V DR + + +E LS+
Sbjct: 419 VKSDRME-DAQRAFESLSE 436
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 31/107 (28%)
Query: 63 NRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSV 122
N L+ Y+K G + A +F+ M R++ISW ++
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSM-------------------------- 546
Query: 123 SYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQL 169
I GFA GF+ L+ F++M ++ +P + T+V+ L+AC+ +
Sbjct: 547 -----ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/624 (36%), Positives = 348/624 (55%), Gaps = 34/624 (5%)
Query: 106 VQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHV-SALN 164
V+D R +FD+MP +D++ +NT I+G+ E++QVF + + D T + L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 165 ACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVS 224
A A+L +LR G QIH + +V +Y+K G+I LF ++V+
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 225 WNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNIL-------------GACFQTG 271
+N MI GY NG+ + + LF+E+ L G T+ +++ G C ++
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSN 349
Query: 272 -------------------RIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFN 312
I+ A +LF EK W MI GYTQNG EDA+ LF
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 313 EMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCG 372
EM + P+ +I+ ++S+CA+L +L G+ VH + + VS+ALI MY KCG
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 373 VTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLS 432
+A +F++M +N V+WN+MI+GY +GQ EAL ++ ++L + P TF+ VL
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLY 529
Query: 433 ACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNS 492
AC HA L + G F+S+ +G PS+ HYACM+++LGR+ + +A+ I+++ +P S
Sbjct: 530 ACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGS 589
Query: 493 LIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSM 552
+W TLL C + D + LFEL+P N G +++LSN+++A + A++R +
Sbjct: 590 SVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTA 649
Query: 553 KSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVL 612
K + + K Y+ IEI H F S D++HP+ + IYE+L KL K++EAG+ P T+L L
Sbjct: 650 KKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL 709
Query: 613 HDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGR 672
HD +EEE+ + HSE+LA+A+ LI G T IRI+KN+RVC DCH K S I R
Sbjct: 710 HDVEEEERELMVKVHSERLAIAFGLIATEPG-TEIRIIKNLRVCLDCHTVTKLISKITER 768
Query: 673 TIILRDSNRFHHFVGGNCSCKDNW 696
I++RD+NRFHHF G CSC D W
Sbjct: 769 VIVVRDANRFHHFKDGVCSCGDYW 792
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 211/473 (44%), Gaps = 47/473 (9%)
Query: 104 GSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDR-FEPTDYTHVSA 162
G++ R +F + D +N + GF+ +L VF+ ++K +P T+ A
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 163 LNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNL 222
++A + D R G+ IHG+ VV + + + + MY K ++ AR +FDRM ++
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 223 VSWNLMISGYLKNGQPKKCIDLFQEM-----------QLLGLNPDEVTVSNI-LG----- 265
+ WN MISGY KN + I +F+++ LL + P + + LG
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 266 -----ACF--------------QTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEED 306
C+ + G+I LF ++ D V + MI GYT NG+ E
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 307 ALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALID 366
+L LF E++ R ++ S+V L +Y +HG + VS+AL
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTT 362
Query: 367 MYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFT 426
+Y K + A +F+ P +++ SWN+MI+GY QNG +A++L+ ++ + P+ T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 427 FVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSL 486
+LSAC G+ D + + S+ +I + + + +A L L
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLF-DL 480
Query: 487 PHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFEL--EPINAGPYIMLSNMYA 537
K N + W+T++S + G G+ A +E+ I P L +YA
Sbjct: 481 MTKKNEVTWNTMISGYGLHG---QGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 96/172 (55%), Gaps = 8/172 (4%)
Query: 270 TGRIDDAGRLFHV------IKEKDNVCWTTMIVGYTQNGKEEDALILFNEML-SEDVRPD 322
T R+ D G +++ ++ D + ++ G++ N +L +F + S D++P+
Sbjct: 59 TQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPN 118
Query: 323 KFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFN 382
+ + +S+ + G+V+HG+AVV G D +LL+ S ++ MY K +DA VF+
Sbjct: 119 SSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFD 178
Query: 383 MMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQEN-LKPDSFTFVSVLSA 433
MP ++ + WN+MI+GY +N +E++ ++ L+ E+ + D+ T + +L A
Sbjct: 179 RMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 76/188 (40%), Gaps = 35/188 (18%)
Query: 33 CTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIIS 92
C ++ + L K + + +E ++ ++ L+ YAK G + AR LFD M ++ ++
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFE-SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 93 WNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRF 152
WN ++S G+ G +EAL +F M
Sbjct: 489 WNTMIS-------------------------------GYGLHGQGQEALNIFYEMLNSGI 517
Query: 153 EPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRN--ALTDMYAKGGEIDKA 210
PT T + L AC+ ++ G +I + + G V++ + D+ + G + +A
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSM-IHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 211 RWLFDRMN 218
+ M+
Sbjct: 577 LQFIEAMS 584
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/684 (35%), Positives = 381/684 (55%), Gaps = 47/684 (6%)
Query: 57 NTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKM 116
++T+L N ++ Y+K G+L YAR F ++ S+N ++ A+A+ + R LFD++
Sbjct: 41 SSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEI 100
Query: 117 PIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGK 176
P D+VSYNT I+G+A+ + A+ +F RM+K FE +T + AC +DL K
Sbjct: 101 PQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--K 158
Query: 177 QIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNN-RNLVSWNLMISGYLKN 235
Q+H V G V NA Y+KGG + +A +F M+ R+ VSWN MI Y ++
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218
Query: 236 GQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC--------------------------FQ 269
+ K + L++EM G D T++++L A
Sbjct: 219 KEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278
Query: 270 TGRID------------DAGRLFHVIKEKDNVCWTTMIVGYTQNGK-EEDALILFNEMLS 316
+G ID D+ ++F I D V W TMI GY+ N + E+A+ F +M
Sbjct: 279 SGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQR 338
Query: 317 EDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLL-VSSALIDMYCKCGVTD 375
RPD S V S+C+ L+S + +HG A+ + + + V++ALI +Y K G
Sbjct: 339 IGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQ 398
Query: 376 DAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACL 435
DA VF+ MP N VS+N MI GYAQ+G EAL LY ++L + P+ TFV+VLSAC
Sbjct: 399 DARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACA 458
Query: 436 HADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIW 495
H + GQ +F+++ I P +HY+CMI+LLGR+ +++A I ++P+KP S+ W
Sbjct: 459 HCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAW 518
Query: 496 STLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSK 555
+ LL C ++ E AA L ++P+ A PY+ML+NMYA +WE++AS+R SM+ K
Sbjct: 519 AALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGK 578
Query: 556 NVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVL--- 612
++K SWIE+ K H FV+ED +HP + E L +++KK+++ G+ + K +
Sbjct: 579 RIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKE 638
Query: 613 HDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGR 672
+ E ++ + +HSEKLA+A+ L+ G + ++KN+R+CGDCH +KF S + GR
Sbjct: 639 DEAGEGDEEMRLGHHSEKLAVAFGLMSTRDG-EELVVVKNLRICGDCHNAIKFMSAVAGR 697
Query: 673 TIILRDSNRFHHFVGGNCSCKDNW 696
II+RD+ RFH F G CSC D W
Sbjct: 698 EIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 88/228 (38%), Gaps = 36/228 (15%)
Query: 33 CTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIIS 92
C+ ++ K++ + N ++N L+ Y KSG L AR +FD+MP + +S
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 93 WNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRF 152
+N + I G+A G EAL ++ RM
Sbjct: 415 FNCM-------------------------------IKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 153 EPTDYTHVSALNACAQLLDLRRGKQIHGKIV-VGNLGGNVFVRNALTDMYAKGGEIDKAR 211
P T V+ L+ACA + G++ + + + + D+ + G++++A
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 212 WLFDRMNNR-NLVSWNLMISGYLKNGQ---PKKCIDLFQEMQLLGLNP 255
D M + V+W ++ K+ ++ + MQ L P
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 339 LYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCG----------VTDD------------ 376
L+ G+ +H V V +S+ +++Y KCG T++
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 377 ---------AWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTF 427
A +F+ +P + VS+N++I+GYA + A+ L+ ++ + + D FT
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 428 VSVLSACL-HADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSL 486
+++AC DL + Q H S+S S+++ + + + +AV + +
Sbjct: 144 SGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNN--AFVTYYSKGGLLREAVSVFYGM 199
Query: 487 PHKPNSLIWSTLL 499
+ + W++++
Sbjct: 200 DELRDEVSWNSMI 212
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/639 (35%), Positives = 363/639 (56%), Gaps = 37/639 (5%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
N+L++ + ++ V R +FD+M RD +S+N+ I G+ + G + + L VF +M E
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWL 213
T VS CA + G+ +H V N L DMY+K G++D A+ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 214 FDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRI 273
F M++R++VS+ MI+GY + G + + LF+EM+ G++PD TV+ +L C + +
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 274 DDAGRLFHVIKE-----------------------------------KDNVCWTTMIVGY 298
D+ R+ IKE KD + W T+I GY
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 299 TQNGKEEDALILFNEMLSED-VRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDD 357
++N +AL LFN +L E PD+ +++ V+ +CA L++ G+ +HG + G D
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 358 LLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQ 417
V+++L+DMY KCG A +F+ + ++++VSW MI GY +G EA+AL++++ Q
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Query: 418 ENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVD 477
++ D +FVS+L AC H+ L + G F+ + I P+++HYAC++++L R+ D+
Sbjct: 594 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 653
Query: 478 KAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYA 537
KA I+++P P++ IW LL C + D+K E A +FELEP N G Y++++N+YA
Sbjct: 654 KAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 713
Query: 538 ACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIK 597
+WE V +R + + ++K SWIEI +V+ FV+ D ++PETE I L K+
Sbjct: 714 EAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRA 773
Query: 598 KLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCG 657
++ E G+SP TK L D +E EK +++C HSEKLA+A +I HG IR+ KN+RVCG
Sbjct: 774 RMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHG-KIIRVTKNLRVCG 832
Query: 658 DCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
DCH KF S + R I+LRDSNRFH F G+CSC+ W
Sbjct: 833 DCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 193/381 (50%), Gaps = 36/381 (9%)
Query: 100 HARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTH 159
+ G +++ +FD++ I ++ +N + A G ++ +F +M E YT
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 160 VSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNN 219
+ + L + G+Q+HG I+ G V N+L Y K +D AR +FD M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 220 RNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILG-------------- 265
R+++SWN +I+GY+ NG +K + +F +M + G+ D T+ ++
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 266 ------ACF---------------QTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKE 304
ACF + G +D A +F + ++ V +T+MI GY + G
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLA 378
Query: 305 EDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSAL 364
+A+ LF EM E + PD +++++V++ CA+ L G+ VH + D+ VS+AL
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL 438
Query: 365 IDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQEN-LKPD 423
+DMY KCG +A VF+ M ++++SWN++I GY++N EAL+L++ LL+E PD
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 424 SFTFVSVLSACLHADLFERGQ 444
T VL AC F++G+
Sbjct: 499 ERTVACVLPACASLSAFDKGR 519
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 49/367 (13%)
Query: 119 RDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQI 178
R NT + F G A+++ K +P T S L CA L+ GK++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 179 ------HGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGY 232
+G ++ NLG + L+ MY G++ +A +FD + + WN++++
Sbjct: 117 DNFIRGNGFVIDSNLG------SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170
Query: 233 LKNGQPKKCIDLFQEMQLLGLNPDEVTVS----------------NILGACFQTG----- 271
K+G I LF++M G+ D T S + G ++G
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 272 --------------RIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSE 317
R+D A ++F + E+D + W ++I GY NG E L +F +ML
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS 290
Query: 318 DVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDA 377
+ D +I SV + CA + G+ VH V + + L+DMY KCG D A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 378 WTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHA 437
VF M R+VVS+ SMI GYA+ G EA+ L++++ +E + PD +T +VL+ C
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 438 DLFERGQ 444
L + G+
Sbjct: 411 RLLDEGK 417
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 39/258 (15%)
Query: 33 CTRVNDVELAKRLQSHM---DLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRD 89
C R ++ KR+ + DL F F+ N L+ YAK G + A +F +M ++D
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGF----DIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 90 IISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFS-RMQ 148
IISW NT I G++ ++ EAL +F+ ++
Sbjct: 463 IISW-------------------------------NTIIGGYSKNCYANEALSLFNLLLE 491
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
+ RF P + T L ACA L +G++IHG I+ + V N+L DMYAK G +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF 268
A LFD + +++LVSW +MI+GY +G K+ I LF +M+ G+ DE++ ++L AC
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 269 QTGRIDDAGRLFHVIKEK 286
+G +D+ R F++++ +
Sbjct: 612 HSGLVDEGWRFFNIMRHE 629
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 161/378 (42%), Gaps = 55/378 (14%)
Query: 271 GRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVV 330
G + +A R+F +K + + W ++ ++G ++ LF +M+S V D ++ S V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 331 SSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVV 390
S + L S++ G+ +HG + G + V ++L+ Y K D A VF+ M R+V+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 391 SWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQ------ 444
SWNS+INGY NG + L+++ ++L ++ D T VSV + C + L G+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 445 ----------------------NHFDSISAVHGITP--SLDHYACMINLLGRSSDVDKAV 480
DS AV S+ Y MI R +AV
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 481 DLIKSLPHK---PNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSN--- 534
L + + + P+ + +L+ CA + G+ + E + G I +SN
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE---NDLGFDIFVSNALM 439
Query: 535 -MYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELS 593
MYA CG ++ + S M+ K++ SW I K + E LS
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDI-----ISWNTIIGGYSKNCYAN----------EALS 484
Query: 594 KLIKKLQEAGFSPNTKLV 611
L+E FSP+ + V
Sbjct: 485 LFNLLLEEKRFSPDERTV 502
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 293 TMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVL 352
T + + ++G E+A+ L D+ P ++ SV+ CA SL G+ V
Sbjct: 66 TQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGN 123
Query: 353 GVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALY 412
G D + S L MY CG +A VF+ + + WN ++N A++G ++ L+
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 413 DKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHG 455
K++ ++ DS+TF V F S+ +VHG
Sbjct: 184 KKMMSSGVEMDSYTFSCV-------------SKSFSSLRSVHG 213
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/622 (35%), Positives = 347/622 (55%), Gaps = 40/622 (6%)
Query: 112 LFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLD 171
LF + YN+ I GF N E L +F ++K +T L AC +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 172 LRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISG 231
+ G +H +V +V +L +Y+ G ++ A LFD + +R++V+W + SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 232 YLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDD---------------- 275
Y +G+ ++ IDLF++M +G+ PD + +L AC G +D
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 276 -------------------AGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLS 316
A +F + EKD V W+TMI GY N ++ + LF +ML
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 317 EDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVD--DDLLVSSALIDMYCKCGVT 374
E+++PD+FSI +SSCA L +L G+ G +++ + +L +++ALIDMY KCG
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGE--WGISLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 375 DDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC 434
+ VF M +++V N+ I+G A+NG + A++ + + + PD TF+ +L C
Sbjct: 365 ARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 435 LHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLI 494
+HA L + G F++IS V+ + +++HY CM++L GR+ +D A LI +P +PN+++
Sbjct: 425 VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIV 484
Query: 495 WSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKS 554
W LLS C + D + E + L LEP NAG Y+ LSN+Y+ GRW++ A +R M
Sbjct: 485 WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNK 544
Query: 555 KNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVLHD 614
K +KK YSWIE++ KVH+F+++D++HP ++ IY +L L +++ GF P T+ V D
Sbjct: 545 KGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFD 604
Query: 615 TQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTI 674
+EEEK + + YHSEKLA+A LI HG IR++KN+RVCGDCH MK S I R I
Sbjct: 605 VEEEEKERVLGYHSEKLAVALGLISTDHG-QVIRVVKNLRVCGDCHEVMKLISKITRREI 663
Query: 675 ILRDSNRFHHFVGGNCSCKDNW 696
++RD+NRFH F G+CSC D W
Sbjct: 664 VVRDNNRFHCFTNGSCSCNDYW 685
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 37/347 (10%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D+ + +LLS ++ SG + D LFD++P R V++ +G+ G REA+ +F +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
+ +P Y V L+AC + DL G+ I + + N FVR L ++YAK G+++
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF 268
KAR +FD M +++V+W+ MI GY N PK+ I+LF +M L PD+ ++ L +C
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 269 QTGRID-----------------------------------DAGRLFHVIKEKDNVCWTT 293
G +D +F +KEKD V
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 294 MIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHG-QVVHGKAVVL 352
I G +NG + + +F + + PD + ++ C + G + + + V
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 353 GVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTR-NVVSWNSMING 398
+ + ++D++ + G+ DDA+ + MP R N + W ++++G
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 374 TDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSA 433
T ++ +F+ N+ +NS+ING+ N E L L+ + + L FTF VL A
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 434 C-----------LHADLFERGQNH----FDSISAVHGITPSLDH---------------Y 463
C LH+ + + G NH S+ +++ + L+ +
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 464 ACMINLLGRSSDVDKAVDLIKSLPH---KPNSLIWSTLLSVCAMKGDIKHGEMAARHLFE 520
+ + S +A+DL K + KP+S +LS C GD+ GE +++ E
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 521 LE-PINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNV 557
+E N+ L N+YA CG+ E S+ SM K++
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/636 (35%), Positives = 364/636 (57%), Gaps = 48/636 (7%)
Query: 107 QDLRALFDKMPIR-DSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNA 165
Q+L LF++ + D S+N+ IA A G S EAL FS M+K PT + A+ A
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 166 CAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSW 225
C+ L D+ GKQ H + V ++FV +AL MY+ G+++ AR +FD + RN+VSW
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 226 NLMISGYLKNGQPKKCIDLFQEMQLLGLNPDE-------VTVSNILGACFQT-------- 270
MI GY NG + LF+++ L+ N D+ + + +++ AC +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 271 -----------------------------GRIDDAGRLFHVIKEKDNVCWTTMIVGYTQN 301
G + A ++F I +KD V + +++ Y Q+
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 302 GKEEDALILFNEMLSEDVRP-DKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLV 360
G +A +F ++ V + ++S+V+ + + +L G+ +H + + +G++DD++V
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIV 324
Query: 361 SSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENL 420
+++IDMYCKCG + A F+ M +NV SW +MI GY +G +AL L+ ++ +
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384
Query: 421 KPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAV 480
+P+ TFVSVL+AC HA L G F+++ G+ P L+HY CM++LLGR+ + KA
Sbjct: 385 RPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAY 444
Query: 481 DLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACG 540
DLI+ + KP+S+IWS+LL+ C + +++ E++ LFEL+ N G Y++LS++YA G
Sbjct: 445 DLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 541 RWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQ 600
RW+DV +R MK++ + K +S +E++ +VH F+ D HP+ E IYE L++L +KL
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLL 564
Query: 601 EAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCH 660
EAG+ NT V HD EEEK ++ HSEKLA+A+ ++ G T + ++KN+RVC DCH
Sbjct: 565 EAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGST-VNVVKNLRVCSDCH 623
Query: 661 LFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
+K S I+ R ++RD+ RFHHF G CSC D W
Sbjct: 624 NVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 88 RDIISWNALLSAHARSG--SVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFS 145
R + N LL A+A+ G V R +FD++ +D VSYN+ ++ +A G S EA +VF
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 146 RMQKDRFEPTDYTHVSA-LNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKG 204
R+ K++ + +S L A + LR GK IH +++ L +V V ++ DMY K
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 205 GEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNIL 264
G ++ AR FDRM N+N+ SW MI+GY +G K ++LF M G+ P+ +T ++L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 265 GACFQTGRIDDAGRLFHVIKEKDNV-----CWTTMIVGYTQNGKEEDALILFNEMLSEDV 319
AC G + R F+ +K + V + M+ + G + A L M +
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM---KM 452
Query: 320 RPDKFSISSVVSSC 333
+PD SS++++C
Sbjct: 453 KPDSIIWSSLLAAC 466
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 189/456 (41%), Gaps = 107/456 (23%)
Query: 22 TEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDL 81
T ++ + C+ + D+ K+ + Y+ + F+ + L+ Y+ GKL AR +
Sbjct: 75 TRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDI-FVSSALIVMYSTCGKLEDARKV 133
Query: 82 FDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREAL 141
FD++P R+I+SW +++ + +G+ D +LF + + ++
Sbjct: 134 FDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN-------------------- 173
Query: 142 QVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMY 201
D VS ++AC+++ + IH ++ V V N L D Y
Sbjct: 174 -----DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 202 AKGGE--IDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQ------------- 246
AKGGE + AR +FD++ +++ VS+N ++S Y ++G + ++F+
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 247 -----------------------EMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVI 283
++ +GL D + ++I+ + GR++ A + F +
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 284 KEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQ 343
K K+ WT MI GY +G AL LF M+ VRP+ + SV+++C+
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS--------- 399
Query: 344 VVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVS-----WNSMING 398
G+ + W FN M R V + M++
Sbjct: 400 --------------------------HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 399 YAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC 434
+ G +A YD + + +KPDS + S+L+AC
Sbjct: 434 LGRAGFLQKA---YDLIQRMKMKPDSIIWSSLLAAC 466
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 136/340 (40%), Gaps = 76/340 (22%)
Query: 18 GQAATEEAYTQLVLDCTRVN-DVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYA------ 70
G A + + Q+V D RV+ + ++ QS M +E + N+++ F A
Sbjct: 235 GVAVARKIFDQIV-DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293
Query: 71 -----KSGKLFYARDLFD---KMPLRD-IISWNALLSAHARSGSVQDLRALFDKMPIRDS 121
SG L + + D +M L D +I +++ + + G V+ R FD+M ++
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 122 VSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGK 181
S+ IAG+ G + +AL++F M P T VS L AC+
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH------------- 400
Query: 182 IVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNR-----NLVSWNLMISGYLKNG 236
G ++ RW F+ M R L + M+ + G
Sbjct: 401 ---------------------AGLHVEGWRW-FNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 237 QPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDA----GRLFHVIKEKDNVCWT 292
+K DL Q M+ + PD + S++L AC ++ A RLF + + C
Sbjct: 439 FLQKAYDLIQRMK---MKPDSIIWSSLLAACRIHKNVELAEISVARLFEL---DSSNCGY 492
Query: 293 TMIVG--YTQNGKEEDA----LILFNEMLSEDVRPDKFSI 326
M++ Y G+ +D +I+ N L V+P FS+
Sbjct: 493 YMLLSHIYADAGRWKDVERVRMIMKNRGL---VKPPGFSL 529
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 344/640 (53%), Gaps = 72/640 (11%)
Query: 124 YNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIV 183
+ AI + REA+Q+ R +K P T+ + + C+Q L GK++H I
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 184 VGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMI-------------- 229
+ + N L MYAK G + AR +FD M NR+L SWN+M+
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARK 172
Query: 230 -----------------SGYLKNGQPKKCIDLFQEMQLL--------------------- 251
+GY+K QP++ + L+ MQ +
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 252 ---------------GLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIV 296
GL+ DEV S+++ + G ID+A +F I EKD V WT+MI
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 297 GYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDD 356
Y ++ + + LF+E++ RP++++ + V+++CA L + G+ VHG +G D
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 357 DLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLL 416
SS+L+DMY KCG + A V + P ++VSW S+I G AQNGQ EAL +D LL
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 417 QENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDV 476
+ KPD TFV+VLSAC HA L E+G F SI+ H ++ + DHY C+++LL RS
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 477 DKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMY 536
++ +I +P KP+ +W+++L C+ G+I E AA+ LF++EP N Y+ ++N+Y
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 537 AACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLI 596
AA G+WE+ +R M+ V K SW EI K H F++ D +HP I E L +L
Sbjct: 533 AAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELR 592
Query: 597 KKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVC 656
KK++E G+ P T LVLHD ++E+K +++ YHSEKLA+A+ ++ G T I++ KN+R C
Sbjct: 593 KKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEG-TAIKVFKNLRSC 651
Query: 657 GDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
DCH +KF S+I R I +RDS RFH F G CSC D W
Sbjct: 652 VDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 227/471 (48%), Gaps = 51/471 (10%)
Query: 7 LRQAIDTLYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLL 66
LR+A+ L R + Y L+ C++ +E K++ H+ + + P + NRLL
Sbjct: 70 LREAVQ-LLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV-IWNRLL 127
Query: 67 HFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNT 126
YAK G L AR +FD+MP RD+ SWN +++ +A G +++ R LFD+M +DS S+
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 127 AIAGFANKGFSREALQVFSRMQK-DRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVG 185
+ G+ K EAL ++S MQ+ P +T A+ A A + +RRGK+IHG IV
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 186 NLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLF 245
L + + ++L DMY K G ID+AR +FD++ +++VSW MI Y K+ + ++ LF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 246 QEMQLLGLNPDEVTVSNILGAC-----------------------------------FQT 270
E+ P+E T + +L AC +
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 271 GRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVV 330
G I+ A + + D V WT++I G QNG+ ++AL F+ +L +PD + +V+
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 331 SSCAKLASLYHGQVVHGKAVVLGVDDDLLVS------SALIDMYCKCGVTDDAWTVFNMM 384
S+C + G V G + + +S + L+D+ + G + +V + M
Sbjct: 428 SACT-----HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 385 PTR-NVVSWNSMINGYAQNGQ-DLEALALYDKLLQENLKPDSFTFVSVLSA 433
P + + W S++ G + G DL A + E P ++ ++ + A
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYA 533
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 366/652 (56%), Gaps = 50/652 (7%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
N L++ + + G + + L RD V++NT ++ EAL+ M + E
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVV-GNLGGNVFVRNALTDMYAKGGEIDKARW 212
P ++T S L AC+ L LR GK++H + G+L N FV +AL DMY ++ R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 213 LFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQ-LLGLNPDEVTVSNILGACFQTG 271
+FD M +R + WN MI+GY +N K+ + LF M+ GL + T++ ++ AC ++G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 272 -----------------------------------RIDDAGRLFHVIKEKDNVCWTTMIV 296
+ID A R+F ++++D V W TMI
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 297 GYTQNGKEEDALILFNEMLSED-----------VRPDKFSISSVVSSCAKLASLYHGQVV 345
GY + EDAL+L ++M + + ++P+ ++ +++ SCA L++L G+ +
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 346 HGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQD 405
H A+ + D+ V SAL+DMY KCG + VF+ +P +NV++WN +I Y +G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 406 LEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYAC 465
EA+ L ++ + +KP+ TF+SV +AC H+ + + G F + +G+ PS DHYAC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 466 MINLLGRSSDVDKAVDLIKSLPHKPNSL-IWSTLLSVCAMKGDIKHGEMAARHLFELEPI 524
+++LLGR+ + +A L+ +P N WS+LL + +++ GE+AA++L +LEP
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 525 NAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPE 584
A Y++L+N+Y++ G W+ +R +MK + V+K SWIE ++VHKFV+ D +HP+
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 585 TEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGV 644
+E + L L +++++ G+ P+T VLH+ +E+EK +C HSEKLA+A+ ++ G
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPG- 838
Query: 645 TPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
T IR+ KN+RVC DCHL KF S I+ R IILRD RFH F G CSC D W
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/556 (24%), Positives = 251/556 (45%), Gaps = 90/556 (16%)
Query: 7 LRQAIDT---LYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHN 63
LR+A+ T + G A+ L+ + D+EL K++ +H+ Y ++ + N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 64 RLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVS 123
L++ Y K G G+V + FD++ R+ VS
Sbjct: 138 TLVNLYRKCGDF----------------------------GAVYKV---FDRISERNQVS 166
Query: 124 YNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLL---DLRRGKQIHG 180
+N+ I+ + AL+ F M + EP+ +T VS + AC+ L L GKQ+H
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 181 -KIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPK 239
+ G L N F+ N L MY K G++ ++ L R+LV+WN ++S +N Q
Sbjct: 227 YGLRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284
Query: 240 KCIDLFQEMQLLGLNPDEVTVSNILGAC----------------FQTGRIDD-------- 275
+ ++ +EM L G+ PDE T+S++L AC + G +D+
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 276 ------------AGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEML-SEDVRPD 322
R+F + ++ W MI GY+QN +++AL+LF M S + +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 323 KFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFN 382
+++ VV +C + + + +HG V G+D D V + L+DMY + G D A +F
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG 464
Query: 383 MMPTRNVVSWNSMINGYAQNGQDLEALALYDKLL-----------QENLKPDSFTFVSVL 431
M R++V+WN+MI GY + +AL L K+ + +LKP+S T +++L
Sbjct: 465 KMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTIL 524
Query: 432 SACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPN 491
+C +G+ + + + + + + ++++ + + + + +P K N
Sbjct: 525 PSCAALSALAKGK-EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-N 582
Query: 492 SLIWSTLLSVCAMKGD 507
+ W+ ++ M G+
Sbjct: 583 VITWNVIIMAYGMHGN 598
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 126/226 (55%), Gaps = 22/226 (9%)
Query: 60 FLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMP-I 118
F+ N L+ Y++ GK+ A +F KM RD+++WN +++ + S +D L KM +
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 119 RDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQI 178
VS KG SR +L+ P T ++ L +CA L L +GK+I
Sbjct: 501 ERKVS----------KGASRVSLK-----------PNSITLMTILPSCAALSALAKGKEI 539
Query: 179 HGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQP 238
H + NL +V V +AL DMYAK G + +R +FD++ +N+++WN++I Y +G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 239 KKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIK 284
++ IDL + M + G+ P+EVT ++ AC +G +D+ R+F+V+K
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 291 WTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAV 350
W ++ ++ +A++ + +M+ ++PD ++ +++ + A L + G+ +H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 351 VLGVD-DDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEAL 409
G D + V++ L+++Y KCG + VF+ + RN VSWNS+I+ + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 410 ALYDKLLQENLKPDSFTFVSVLSAC 434
+ +L EN++P SFT VSV++AC
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTAC 209
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 65 LLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIR----D 120
L+ YAK G L +R +FD++P +++I+WN ++ A+ G+ Q+ L M ++ +
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 617
Query: 121 SVSYNTAIAGFANKGFSREALQVFSRMQKDR-FEPT 155
V++ + A ++ G E L++F M+ D EP+
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/669 (34%), Positives = 368/669 (55%), Gaps = 70/669 (10%)
Query: 97 LSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRM-QKDRFEPT 155
++A + S++ R +FD++P +S ++NT I +A+ ++ F M + + P
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 156 DYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFD 215
YT + A A++ L G+ +HG V +G +VFV N+L Y G++D A +F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 216 RMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC-------- 267
+ +++VSWN MI+G+++ G P K ++LF++M+ + VT+ +L AC
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 268 ---------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYT- 299
+ G I+DA RLF ++EKDNV WTTM+ GY
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 300 ------------------------------QNGKEEDALILFNEM-LSEDVRPDKFSISS 328
QNGK +ALI+F+E+ L ++++ ++ ++ S
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 329 VVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRN 388
+S+CA++ +L G+ +H G+ + V+SALI MY KCG + + VFN + R+
Sbjct: 371 TLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 430
Query: 389 VVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFD 448
V W++MI G A +G EA+ ++ K+ + N+KP+ TF +V AC H L + ++ F
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 449 SISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDI 508
+ + +GI P HYAC++++LGRS ++KAV I+++P P++ +W LL C + ++
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 550
Query: 509 KHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEI 568
EMA L ELEP N G +++LSN+YA G+WE+V+ +R M+ +KK S IEI
Sbjct: 551 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Query: 569 DNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEE-KVKSICYH 627
D +H+F+S D HP +E +Y +L ++++KL+ G+ P VL +EEE K +S+ H
Sbjct: 611 DGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLH 670
Query: 628 SEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVG 687
SEKLA+ Y LI IR++KN+RVCGDCH K S + R II+RD RFHHF
Sbjct: 671 SEKLAICYGLIST-EAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRN 729
Query: 688 GNCSCKDNW 696
G CSC D W
Sbjct: 730 GQCSCNDFW 738
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 219/470 (46%), Gaps = 82/470 (17%)
Query: 159 HVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKG--GEIDKARWLFDR 216
H+S + C + LR+ KQ HG ++ + + + L M A ++ AR +FD
Sbjct: 33 HISLIERC---VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE 89
Query: 217 MNNRNLVSWNLMISGYLKNGQPKKCI----DLFQEMQ----------------------- 249
+ N +WN +I Y P I D+ E Q
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 250 ---LLGLN-----PDEVTVSNILGAC-FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQ 300
L G+ +V V+N L C F G +D A ++F IKEKD V W +MI G+ Q
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 301 NGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLV 360
G + AL LF +M SEDV+ ++ V+S+CAK+ +L G+ V V+ +L +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 361 SSALIDMYCKCGVTDDA--------------WT-----------------VFNMMPTRNV 389
++A++DMY KCG +DA WT V N MP +++
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 390 VSWNSMINGYAQNGQDLEALALYDKL-LQENLKPDSFTFVSVLSACLHADLFERGQNHFD 448
V+WN++I+ Y QNG+ EAL ++ +L LQ+N+K + T VS LSAC E G+
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIH 388
Query: 449 SISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDI 508
S HGI + + +I++ + D++K+ ++ S+ K + +WS ++ AM G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHG-- 445
Query: 509 KHGEMAARHLFELEPINAGPY-IMLSNMYAAC---GRWEDVASIRSSMKS 554
G A ++++ N P + +N++ AC G ++ S+ M+S
Sbjct: 446 -CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 139/250 (55%), Gaps = 2/250 (0%)
Query: 33 CTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIIS 92
C ++ ++E +++ S+++ N N T L N +L Y K G + A+ LFD M +D ++
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLT-LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 93 WNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ-KDR 151
W +L +A S + R + + MP +D V++N I+ + G EAL VF +Q +
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 152 FEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKAR 211
+ T VS L+ACAQ+ L G+ IH I + N V +AL MY+K G+++K+R
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 212 WLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTG 271
+F+ + R++ W+ MI G +G + +D+F +MQ + P+ VT +N+ AC TG
Sbjct: 421 EVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480
Query: 272 RIDDAGRLFH 281
+D+A LFH
Sbjct: 481 LVDEAESLFH 490
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 168/379 (44%), Gaps = 69/379 (18%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D+ N+L+ + G + +F + +D VS+N+ I GF KG +AL++F +M+
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
+ + + T V L+ACA++ +L G+Q+ I + N+ + NA+ DMY K G I+
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 209 KARWLFDRMN-------------------------------NRNLVSWNLMISGYLKNGQ 237
A+ LFD M +++V+WN +IS Y +NG+
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 238 PKKCIDLFQEMQLL-GLNPDEVTVSNILGACFQTGR------------------------ 272
P + + +F E+QL + +++T+ + L AC Q G
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 273 -----------IDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRP 321
++ + +F+ ++++D W+ MI G +G +A+ +F +M +V+P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 322 DKFSISSVVSSCAKLASLYHGQ-VVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTV 380
+ + ++V +C+ + + + H G+ + + ++D+ + G + A
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 381 FNMMPTRNVVS-WNSMING 398
MP S W +++
Sbjct: 525 IEAMPIPPSTSVWGALLGA 543
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/646 (33%), Positives = 364/646 (56%), Gaps = 72/646 (11%)
Query: 122 VSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGK 181
+++ + I F ++ +AL F M+ P S L +C ++DLR G+ +HG
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 182 IVVGNLGGNVFVRNALTDMYAK------------------------GGE----------- 206
IV + +++ NAL +MYAK G E
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 207 -IDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNIL- 264
ID R +F+ M +++VS+N +I+GY ++G + + + +EM L PD T+S++L
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 265 ---------------GACFQTG-------------------RIDDAGRLFHVIKEKDNVC 290
G + G RI+D+ R+F + +D +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 291 WTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAV 350
W +++ GY QNG+ +AL LF +M++ V+P + SSV+ +CA LA+L+ G+ +HG +
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 351 VLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALA 410
G ++ ++SAL+DMY KCG A +F+ M + VSW ++I G+A +G EA++
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 411 LYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLL 470
L++++ ++ +KP+ FV+VL+AC H L + +F+S++ V+G+ L+HYA + +LL
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 471 GRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYI 530
GR+ +++A + I + +P +WSTLLS C++ +++ E A +F ++ N G Y+
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 531 MLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYE 590
++ NMYA+ GRW+++A +R M+ K ++K A SWIE+ NK H FVS DR+HP + I E
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 591 ELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIM 650
L +++++++ G+ +T VLHD EE K + + HSE+LA+A+ +I G T IR+
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT-IRVT 669
Query: 651 KNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
KNIR+C DCH+ +KF S I R II+RD++RFHHF GNCSC D W
Sbjct: 670 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 209/433 (48%), Gaps = 57/433 (13%)
Query: 14 LYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSH-----MDLNFYEPNTTFLHNRLLHF 68
+ + G+ + ++ CT + D+ + + MD + Y N L++
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA------LMNM 149
Query: 69 YAK---SGKLFYARDLFDKMPLRDIISWNALLSAHA--RSGSVQDLRALFDKMPIRDSVS 123
YAK G ++FD+MP R S + + A + +R +F+ MP +D VS
Sbjct: 150 YAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVS 209
Query: 124 YNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIV 183
YNT IAG+A G +AL++ M +P +T S L ++ +D+ +GK+IHG ++
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 184 VGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCID 243
+ +V++ ++L DMYAK I+ + +F R+ R+ +SWN +++GY++NG+ + +
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 244 LFQEMQLLGLNPDEVTVSNILGACF----------------------------------- 268
LF++M + P V S+++ AC
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 269 QTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISS 328
+ G I A ++F + D V WT +I+G+ +G +A+ LF EM + V+P++ + +
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 329 VVSSCAKLASLYHG-QVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMM--- 384
V+++C+ + + + V G++ +L +A+ D+ + G ++A+ + M
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 385 PTRNVVSWNSMIN 397
PT +V W+++++
Sbjct: 510 PTGSV--WSTLLS 520
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 158/292 (54%), Gaps = 15/292 (5%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D+ ++L+ +A+S ++D +F ++ RD +S+N+ +AG+ G EAL++F +M
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV 335
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
+ +P S + ACA L L GKQ+HG ++ G G N+F+ +AL DMY+K G I
Sbjct: 336 TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF 268
AR +FDRMN + VSW +I G+ +G + + LF+EM+ G+ P++V +L AC
Sbjct: 396 AARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 455
Query: 269 QTGRIDDAGRLFHVI-------KEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRP 321
G +D+A F+ + +E ++ ++G + GK E+A ++M V P
Sbjct: 456 HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG--RAGKLEEAYNFISKMC---VEP 510
Query: 322 DKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALI-DMYCKCG 372
S+++SSC+ +L + V K + VD + + + L+ +MY G
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEK--IFTVDSENMGAYVLMCNMYASNG 560
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 86/189 (45%), Gaps = 38/189 (20%)
Query: 280 FHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASL 339
F +K + W ++I +T AL F EM + PD SV+ SC + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 340 YHGQVVHGKAVVLGVDDDLLVSSALIDMYCKC---------------------------- 371
G+ VHG V LG+D DL +AL++MY K
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 372 ---------GVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKP 422
G+ D VF +MP ++VVS+N++I GYAQ+G +AL + ++ +LKP
Sbjct: 182 KAETCIMPFGI-DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 423 DSFTFVSVL 431
DSFT SVL
Sbjct: 241 DSFTLSSVL 249
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/569 (36%), Positives = 331/569 (58%), Gaps = 37/569 (6%)
Query: 163 LNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNL 222
L C L +G+ +H I+ ++ + N L +MYAK G +++AR +F++M R+
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 223 VSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNIL----------------GA 266
V+W +ISGY ++ +P + F +M G +P+E T+S+++ G
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 267 CFQTG-------------------RIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDA 307
C + G +DDA +F ++ +++V W +I G+ + E A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKA 246
Query: 308 LILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDM 367
L LF ML + RP FS +S+ +C+ L G+ VH + G + L+DM
Sbjct: 247 LELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 368 YCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTF 427
Y K G DA +F+ + R+VVSWNS++ YAQ+G EA+ ++++ + ++P+ +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 428 VSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLP 487
+SVL+AC H+ L + G ++++ + GI P HY +++LLGR+ D+++A+ I+ +P
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 488 HKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVAS 547
+P + IW LL+ C M + + G AA H+FEL+P + GP+++L N+YA+ GRW D A
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485
Query: 548 IRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPN 607
+R MK VKK A SW+EI+N +H FV+ D HP+ E I + +++ K++E G+ P+
Sbjct: 486 VRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPD 545
Query: 608 TKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFAS 667
T V+ ++E+ ++ YHSEK+ALA+ L+ P G T I I KNIRVCGDCH +K AS
Sbjct: 546 TSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGST-IHIKKNIRVCGDCHTAIKLAS 604
Query: 668 DIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
++GR II+RD+NRFHHF GNCSCKD W
Sbjct: 605 KVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 36/346 (10%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
DI+ N LL+ +A+ GS+++ R +F+KMP RD V++ T I+G++ +AL F++M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
+ + P ++T S + A A G Q+HG V NV V +AL D+Y + G +D
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF 268
A+ +FD + +RN VSWN +I+G+ + +K ++LFQ M G P + +++ GAC
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 269 QT-----------------------------------GRIDDAGRLFHVIKEKDNVCWTT 293
T G I DA ++F + ++D V W +
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 294 MIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLG 353
++ Y Q+G ++A+ F EM +RP++ S SV+++C+ L G + G
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Query: 354 VDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVS-WNSMING 398
+ + ++D+ + G + A MP + W +++N
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 65 LLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSY 124
LL Y + G + A+ +FD + R+ +SWNAL++ HAR +
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE----------------- 244
Query: 125 NTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVV 184
+AL++F M +D F P+ +++ S AC+ L +GK +H ++
Sbjct: 245 --------------KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 185 GNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDL 244
F N L DMYAK G I AR +FDR+ R++VSWN +++ Y ++G K+ +
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 245 FQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVC-----WTTMIVGYT 299
F+EM+ +G+ P+E++ ++L AC +G +D+ + ++K KD + + T++
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLG 409
Query: 300 QNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVD-DDL 358
+ G AL EM + P +++++C + G + V +D DD
Sbjct: 410 RAGDLNRALRFIEEM---PIEPTAAIWKALLNACRMHKNTELG--AYAAEHVFELDPDDP 464
Query: 359 LVSSALIDMYCKCGVTDDAWTVFNMMPTRNV 389
L ++Y G +DA V M V
Sbjct: 465 GPHVILYNIYASGGRWNDAARVRKKMKESGV 495
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 130/285 (45%), Gaps = 44/285 (15%)
Query: 312 NEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKC 371
N++ + D+ ++++ C L G++VH + D+++ + L++MY KC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 372 GVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVL 431
G ++A VF MP R+ V+W ++I+GY+Q+ + +AL ++++L+ P+ FT SV+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 432 SA--------CLHA---------------------DLFER------GQNHFDSISAVHGI 456
A C H DL+ R Q FD++ + + +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 457 TPSLDHYACMINLLGRSSDVDKAVDLIKSL---PHKPNSLIWSTLLSVCAMKGDIKHGEM 513
+ + +I R S +KA++L + + +P+ +++L C+ G ++ G+
Sbjct: 229 S-----WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 514 AARHLFEL-EPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNV 557
++ + E + A L +MYA G D I + ++V
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 25 AYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDK 84
+Y L C+ +E K + ++M + E F N LL YAKSG + AR +FD+
Sbjct: 264 SYASLFGACSSTGFLEQGKWVHAYM-IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 85 MPLRDIISWNALLSAHARSGSVQDLRALFDKM---PIR-DSVSYNTAIAGFANKGFSREA 140
+ RD++SWN+LL+A+A+ G ++ F++M IR + +S+ + + ++ G E
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 141 LQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRG 175
+ M+KD P + +V+ ++ + DL R
Sbjct: 383 WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/602 (37%), Positives = 343/602 (56%), Gaps = 53/602 (8%)
Query: 112 LFDKMPIRDSVSYNTAIAGFANKGFSRE--ALQVFSRMQKDRF-EPTDYTHVSALNACAQ 168
+F++MP R+ S+NT I GF+ + A+ +F M D F EP +T S L ACA+
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 169 LLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLF-------------- 214
++ GKQIHG + GG+ FV + L MY G + AR LF
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 215 DRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRID 274
R + +V WN+MI GY++ G K LF +M
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKM-------------------------- 234
Query: 275 DAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCA 334
+++ V W TMI GY+ NG +DA+ +F EM D+RP+ ++ SV+ + +
Sbjct: 235 ---------RQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAIS 285
Query: 335 KLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNS 394
+L SL G+ +H A G+ D ++ SALIDMY KCG+ + A VF +P NV++W++
Sbjct: 286 RLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 395 MINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVH 454
MING+A +GQ +A+ + K+ Q ++P ++++L+AC H L E G+ +F + +V
Sbjct: 346 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 455 GITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMA 514
G+ P ++HY CM++LLGRS +D+A + I ++P KP+ +IW LL C M+G+++ G+
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Query: 515 ARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHK 574
A L ++ P ++G Y+ LSNMYA+ G W +V+ +R MK K+++K S I+ID +H+
Sbjct: 466 ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHE 525
Query: 575 FVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALA 634
FV ED +HP+ + I L ++ KL+ AG+ P T VL + +EE+K + YHSEK+A A
Sbjct: 526 FVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATA 585
Query: 635 YCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKD 694
+ LI G PIRI+KN+R+C DCH +K S + R I +RD RFHHF G+CSC D
Sbjct: 586 FGLISTSPG-KPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMD 644
Query: 695 NW 696
W
Sbjct: 645 YW 646
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 187/459 (40%), Gaps = 117/459 (25%)
Query: 59 TFLHNRLLHFYAKSG----KLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFD 114
T +L F A S L YA +F++MP R+ SWN ++ + S D
Sbjct: 55 TLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDE--------D 106
Query: 115 KMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRF-EPTDYTHVSALNACAQLLDLR 173
K I A+ +F M D F EP +T S L ACA+ ++
Sbjct: 107 KALI---------------------AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 174 RGKQIHGKIVVGNLGGNVFVR--------------------------------------- 194
GKQIHG + GG+ FV
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 195 ------NALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEM 248
N + D Y + G+ AR LFD+M R++VSWN MISGY NG K +++F+EM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 249 QLLGLNPDEVTVSNILGACFQTG-----------------RIDD---------------- 275
+ + P+ VT+ ++L A + G RIDD
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 276 --AGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSC 333
A +F + ++ + W+ MI G+ +G+ DA+ F +M VRP + +++++C
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 334 AKLASLYHGQVVHGKAV-VLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTR-NVVS 391
+ + G+ + V V G++ + ++D+ + G+ D+A MP + + V
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 392 WNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSV 430
W +++ G ++E +L + + DS +V++
Sbjct: 446 WKALLGACRMQG-NVEMGKRVANILMDMVPHDSGAYVAL 483
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/617 (35%), Positives = 346/617 (56%), Gaps = 73/617 (11%)
Query: 57 NTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKM 116
N F+ NRL+ Y+K G L R +FDKMP R+I +WN++++ + G + + +LF M
Sbjct: 53 NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
Query: 117 PIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGK 176
P RD ++N+ ++GFA EAL F+ M K+ F +Y+ S L+AC+ L D+ +G
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 177 QIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNG 236
Q+H I +V++ +AL DMY+K G ++ A+ +FD M +RN+VSWN +I+ + +NG
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 237 QPKKCIDLFQEMQLLGLNPDEVTVSNILGAC----------------------------- 267
+ +D+FQ M + PDEVT+++++ AC
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 268 -------FQTGRIDDAGRLFHVIKEKDNVCWTTMI------------------------- 295
+ RI +A +F + ++ + T+MI
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 296 ------VGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQ------ 343
GYTQNG+ E+AL LF + E V P +S ++++ +CA LA L+ G
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 344 VVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNG 403
+ HG G +DD+ V ++LIDMY KCG ++ + VF M R+ VSWN+MI G+AQNG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 404 QDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHY 463
EAL L+ ++L+ KPD T + VLSAC HA E G+++F S++ G+ P DHY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 464 ACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEP 523
CM++LLGR+ +++A +I+ +P +P+S+IW +LL+ C + +I G+ A L E+EP
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 524 INAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHP 583
N+GPY++LSNMYA G+WEDV ++R SM+ + V K SWI+I H F+ +D++HP
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHP 652
Query: 584 ETEIIYEELSKLIKKLQ 600
+ I+ L LI +++
Sbjct: 653 RKKQIHSLLDILIAEMR 669
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 183/383 (47%), Gaps = 41/383 (10%)
Query: 176 KQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKN 235
+ +H ++ +F++N L D Y+K G ++ R +FD+M RN+ +WN +++G K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK- 98
Query: 236 GQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMI 295
G +D+A LF + E+D W +M+
Sbjct: 99 ----------------------------------LGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 296 VGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVD 355
G+ Q+ + E+AL F M E +++S +SV+S+C+ L + G VH
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 356 DDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKL 415
D+ + SAL+DMY KCG +DA VF+ M RNVVSWNS+I + QNG +EAL ++ +
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 416 LQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSD 475
L+ ++PD T SV+SAC + GQ + + + +++ + S
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 476 VDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLF-ELEPINAGPYIMLSN 534
+ +A + S+P + N + ++++S AM K AAR +F ++ N + L
Sbjct: 305 IKEARFIFDSMPIR-NVIAETSMISGYAMAASTK----AARLMFTKMAERNVVSWNALIA 359
Query: 535 MYAACGRWEDVASIRSSMKSKNV 557
Y G E+ S+ +K ++V
Sbjct: 360 GYTQNGENEEALSLFCLLKRESV 382
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 188/380 (49%), Gaps = 17/380 (4%)
Query: 23 EEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLF 82
E ++ C ++ +++ + + + N N L N + YAK ++ AR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 83 DKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQ 142
D MP+R++I+ +++S +A + S + R +F KM R+ VS+N IAG+ G + EAL
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 143 VFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLG------GNVFVRNA 196
+F ++++ PT Y+ + L ACA L +L G Q H ++ ++FV N+
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 197 LTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPD 256
L DMY K G +++ +F +M R+ VSWN MI G+ +NG + ++LF+EM G PD
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 257 EVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVC-----WTTMIVGYTQNGKEEDALILF 311
+T+ +L AC G +++ F + V +T M+ + G E+A +
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI 552
Query: 312 NEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALI-DMYCK 370
EM ++PD S++++C ++ G+ V K +L V+ L+ +MY +
Sbjct: 553 EEM---PMQPDSVIWGSLLAACKVHRNITLGKYVAEK--LLEVEPSNSGPYVLLSNMYAE 607
Query: 371 CGVTDDAWTVFNMMPTRNVV 390
G +D V M V
Sbjct: 608 LGKWEDVMNVRKSMRKEGVT 627
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 73/306 (23%)
Query: 322 DKFSISSVVSSC--AKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWT 379
D + ++ SC +KL+++Y + VH + G +++ + + LID Y KCG +D
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIY-VRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 380 VFNMMPTRNV-------------------------------VSWNSMINGYAQNGQDLEA 408
VF+ MP RN+ +WNSM++G+AQ+ + EA
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 409 LALYDKLLQENLKPDSFTFVSVLSACLHADLFERG-QNH-----FDSISAVHGITPSLDH 462
L + + +E + ++F SVLSAC + +G Q H +S V+ + +D
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 463 YA------------------------CMINLLGRSSDVDKAVDLIKSLPH---KPNSLIW 495
Y+ +I ++ +A+D+ + + +P+ +
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 496 STLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSN----MYAACGRWEDVASIRSS 551
++++S CA IK G+ + + + + I+LSN MYA C R ++ I S
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRND--IILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 552 MKSKNV 557
M +NV
Sbjct: 315 MPIRNV 320
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/641 (34%), Positives = 357/641 (55%), Gaps = 39/641 (6%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
DI NAL++ + + G V+ R LFD+MP RD +S+N I+G+ G E L++F M+
Sbjct: 230 DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR 289
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
+P T S ++AC L D R G+ IH ++ ++ V N+LT MY G
Sbjct: 290 GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWR 349
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF 268
+A LF RM +++VSW MISGY N P K ID ++ M + PDE+TV+ +L AC
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409
Query: 269 QTGR-----------------------------------IDDAGRLFHVIKEKDNVCWTT 293
G ID A +FH I K+ + WT+
Sbjct: 410 TLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTS 469
Query: 294 MIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLG 353
+I G N + +ALI +M ++P+ ++++ +++CA++ +L G+ +H + G
Sbjct: 470 IIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 354 VDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYD 413
V D + +AL+DMY +CG + AW+ FN ++V SWN ++ GY++ GQ + L+D
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 414 KLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRS 473
++++ ++PD TF+S+L C + + +G +F + +G+TP+L HYAC+++LLGR+
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRA 646
Query: 474 SDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLS 533
++ +A I+ +P P+ +W LL+ C + I GE++A+H+FEL+ + G YI+L
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLC 706
Query: 534 NMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELS 593
N+YA CG+W +VA +R MK + A SW+E+ KVH F+S+D+ HP+T+ I L
Sbjct: 707 NLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLE 766
Query: 594 KLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNI 653
+K+ E G + ++ D E + + C HSE+ A+A+ LI G+ PI + KN+
Sbjct: 767 GFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGM-PIWVTKNL 825
Query: 654 RVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKD 694
+C +CH +KF S + R I +RD+ FHHF G CSC D
Sbjct: 826 SMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 195/366 (53%), Gaps = 37/366 (10%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRM-QKDRF 152
NA L+ R G++ D +F KM R+ S+N + G+A +G+ EA+ ++ RM
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 153 EPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARW 212
+P YT L C + DL RGK++H +V ++ V NAL MY K G++ AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 213 LFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC----- 267
LFDRM R+++SWN MISGY +NG + ++LF M+ L ++PD +T+++++ AC
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 268 ------------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVG 297
G +A +LF ++ KD V WTTMI G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 298 YTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDD 357
Y N + A+ + M + V+PD+ ++++V+S+CA L L G +H A+ +
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 358 LLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQ 417
++V++ LI+MY KC D A +F+ +P +NV+SW S+I G N + EAL ++ + ++
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 491
Query: 418 ENLKPD 423
L+P+
Sbjct: 492 MTLQPN 497
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 187/413 (45%), Gaps = 50/413 (12%)
Query: 130 GFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGG 189
G G EA+++ + MQ+ R + V+ + C G +++ +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 190 NVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQ 249
V + NA M+ + G + A ++F +M+ RNL SWN+++ GY K G + + L+ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 250 LLG-LNPDEVTVSNILGAC-----------------------------------FQTGRI 273
+G + PD T +L C + G +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 274 DDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSC 333
A LF + +D + W MI GY +NG + L LF M V PD +++SV+S+C
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 334 AKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWN 393
L G+ +H + G D+ V ++L MY G +A +F+ M +++VSW
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 394 SMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAV 453
+MI+GY N +A+ Y + Q+++KPD T +VLSAC A L D+ +
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC--ATL-----GDLDTGVEL 420
Query: 454 H--GITPSLDHYAC----MINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLS 500
H I L Y +IN+ + +DKA+D+ ++P K N + W+++++
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIA 472
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 144/345 (41%), Gaps = 54/345 (15%)
Query: 297 GYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVV----L 352
G NGK E+A+ L N M V D+ ++V C + G V+ A+ L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 353 GVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALY 412
GV+ + +A + M+ + G DAW VF M RN+ SWN ++ GYA+ G EA+ LY
Sbjct: 128 GVE----LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 413 DKLLQ-ENLKPDSFTFVSVLSACLHADLFERGQN-HFDSISAVHGITPSLDHYACMINLL 470
++L +KPD +TF VL C RG+ H + +G +D +I +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR--YGYELDIDVVNALITMY 241
Query: 471 GRSSDVDKAVDLIKSLPHK----------------------------------PNSLIWS 496
+ DV A L +P + P+ + +
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 497 TLLSVCAMKGDIKHG-EMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSK 555
+++S C + GD + G ++ A + ++ L+ MY G W + + S M+ K
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 556 NVKKF----AAYSWIEIDNK---VHKFVSEDRTHPETEIIYEELS 593
++ + + Y + + +K ++ + +D P+ + LS
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLS 406
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 37/265 (13%)
Query: 9 QAIDT--LYSRGQAATEEAYTQLVLD-CTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRL 65
+AIDT + + +E VL C + D++ L + + + + N L
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-LAIKARLISYVIVANNL 439
Query: 66 LHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYN 125
++ Y+K + A D+F +P +++ISW ++
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSI----------------------------- 470
Query: 126 TAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVG 185
IAG EAL +F R K +P T +AL ACA++ L GK+IH ++
Sbjct: 471 --IAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT 527
Query: 186 NLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLF 245
+G + F+ NAL DMY + G ++ A W +++ SWN++++GY + GQ ++LF
Sbjct: 528 GVGLDDFLPNALLDMYVRCGRMNTA-WSQFNSQKKDVTSWNILLTGYSERGQGSMVVELF 586
Query: 246 QEMQLLGLNPDEVTVSNILGACFQT 270
M + PDE+T ++L C ++
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKS 611
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 73 GKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFA 132
GK +A L + L D + NALL + R G + + F+ +D S+N + G++
Sbjct: 517 GKEIHAHVLRTGVGLDDFLP-NALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYS 574
Query: 133 NKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVF 192
+G +++F RM K R P + T +S L C++ +R+G K+ + N+
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLK 634
Query: 193 VRNALTDMYAKGGEIDKARWLFDRM 217
+ D+ + GE+ +A +M
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKM 659
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/569 (36%), Positives = 336/569 (59%), Gaps = 36/569 (6%)
Query: 163 LNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNL 222
L CA+ + K HGKI+ +L G+V + N L + Y+K G ++ AR +FD M R+L
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 223 VSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC--------------- 267
VSWN MI Y +N + +D+F EM+ G E T+S++L AC
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 268 --------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDA 307
+ G I DA ++F +++K +V W++M+ GY QN E+A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 308 LILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDM 367
L+L+ + ++F++SSV+ +C+ LA+L G+ +H G ++ V+S+ +DM
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 368 YCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTF 427
Y KCG +++ +F+ + +N+ WN++I+G+A++ + E + L++K+ Q+ + P+ TF
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTF 367
Query: 428 VSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLP 487
S+LS C H L E G+ F + +G++P++ HY+CM+++LGR+ + +A +LIKS+P
Sbjct: 368 SSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427
Query: 488 HKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVAS 547
P + IW +LL+ C + +++ E+AA LFELEP NAG +++LSN+YAA +WE++A
Sbjct: 428 FDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAK 487
Query: 548 IRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPN 607
R ++ +VKK SWI+I +KVH F + HP I L L+ K ++ G+ P+
Sbjct: 488 SRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPS 547
Query: 608 TKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFAS 667
+ LHD + +K + + HSEKLAL + L+ P +P+RIMKN+R+C DCH FMK AS
Sbjct: 548 VEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPES-SPVRIMKNLRICVDCHEFMKAAS 606
Query: 668 DIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
R II+RD NRFHHF G+CSC D W
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 114/191 (59%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE 153
ALL +A+ G ++D +F+ M + SV++++ +AG+ EAL ++ R Q+ E
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 154 PTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWL 213
+T S + AC+ L L GKQ+H I G NVFV ++ DMYAK G + ++ +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 214 FDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRI 273
F + +NL WN +ISG+ K+ +PK+ + LF++MQ G++P+EVT S++L C TG +
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 274 DDAGRLFHVIK 284
++ R F +++
Sbjct: 381 EEGRRFFKLMR 391
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 188/382 (49%), Gaps = 44/382 (11%)
Query: 57 NTTFLHNRLLHFYAKSGKLFYARDLFDKMPLR-----DIISWNALLSAHARSGSVQDLRA 111
N +H +L A++G + A+ K+ +R D+ N L++A+++ G V+ R
Sbjct: 60 NRNLVH-EILQLCARNGAVMEAKACHGKI-IRIDLEGDVTLLNVLINAYSKCGFVELARQ 117
Query: 112 LFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLD 171
+FD M R VS+NT I + EAL +F M+ + F+ +++T S L+AC D
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177
Query: 172 LRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISG 231
K++H V + N++V AL D+YAK G I A +F+ M +++ V+W+ M++G
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237
Query: 232 YLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC------------------------ 267
Y++N ++ + L++ Q + L ++ T+S+++ AC
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 268 -----------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLS 316
+ G + ++ +F ++EK+ W T+I G+ ++ + ++ +ILF +M
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 317 EDVRPDKFSISSVVSSCAKLASLYHG-QVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTD 375
+ + P++ + SS++S C + G + G+ +++ S ++D+ + G+
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 417
Query: 376 DAWTVFNMMPTRNVVS-WNSMI 396
+A+ + +P S W S++
Sbjct: 418 EAYELIKSIPFDPTASIWGSLL 439
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 175/359 (48%), Gaps = 48/359 (13%)
Query: 206 EIDKARWLFDRMNNRNLVSWNLMISGYLKNG---QPKKCIDLFQEMQLLGLNPDEVTVSN 262
E+ R+ + +NRNLV L + +NG + K C + L G +VT+ N
Sbjct: 48 EVSPGRY-SNEFSNRNLVHEILQLCA--RNGAVMEAKACHGKIIRIDLEG----DVTLLN 100
Query: 263 IL-GACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRP 321
+L A + G ++ A ++F + E+ V W TMI YT+N E +AL +F EM +E +
Sbjct: 101 VLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 160
Query: 322 DKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVF 381
+F+ISSV+S+C + +H +V +D +L V +AL+D+Y KCG+ DA VF
Sbjct: 161 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 220
Query: 382 NMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC------- 434
M ++ V+W+SM+ GY QN EAL LY + + +L+ + FT SV+ AC
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 280
Query: 435 ----LHADLFER--GQNHFDSISAVHGIT-----------------PSLDHYACMINLLG 471
+HA + + G N F + SAV +L+ + +I+
Sbjct: 281 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 472 RSSDVDKAVDLIKSLPH---KPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAG 527
+ + + + L + + PN + +S+LLSVC G ++ G R F+L G
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG----RRFFKLMRTTYG 395
Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 382 NMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFE 441
N RN+V + ++ A+NG +EA A + K+++ +L+ D +++A E
Sbjct: 56 NEFSNRNLV--HEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 113
Query: 442 RGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDL---IKSLPHKPNSLIWSTL 498
+ FD + + SL + MI L R+ +A+D+ +++ K + S++
Sbjct: 114 LARQVFDGM-----LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 168
Query: 499 LSVCAMKGDIKHGEMAARHLFELEP-INAGPYI--MLSNMYAACGRWEDVASIRSSMKSK 555
LS C + D E H ++ I+ Y+ L ++YA CG +D + SM+ K
Sbjct: 169 LSACGVNCDAL--ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 556 NVKKFAAYSWIEIDNK 571
+ +++ + NK
Sbjct: 227 SSVTWSSMVAGYVQNK 242
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 14 LYSRGQAATEE----AYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFY 69
LY R Q + E + ++ C+ + + K++ + + + + N F+ + + Y
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV-FVASSAVDMY 308
Query: 70 AKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPI----RDSVSYN 125
AK G L + +F ++ +++ WN ++S A+ +++ LF+KM + V+++
Sbjct: 309 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 368
Query: 126 TAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSAL 163
+ ++ + G E + F M+ + H S +
Sbjct: 369 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCM 406
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/643 (35%), Positives = 362/643 (56%), Gaps = 41/643 (6%)
Query: 91 ISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKD 150
IS + L+ A + G + R +FD M R V++N+ IA S+EA++++ M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 151 RFEPTDYTHVSALNACAQLLDLRRGKQIHG-KIVVGNLGGNVFVRNALTDMYAKGGEIDK 209
P +YT S A + L + ++ HG +++G NVFV +AL DMY K G+ +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 210 ARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC-- 267
A+ + DR+ +++V +I GY + G+ + + FQ M + + P+E T +++L +C
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 268 ---------------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTM 294
+ +DD+ R+F I+ + V WT++
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 295 IVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGV 354
I G QNG+EE ALI F +M+ + ++P+ F++SS + C+ LA G+ +HG G
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF 399
Query: 355 DDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDK 414
D D S LID+Y KCG +D A VF+ + +V+S N+MI YAQNG EAL L+++
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFER 459
Query: 415 LLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSS 474
++ L+P+ T +SVL AC ++ L E G FDS I + DHYACM++LLGR+
Sbjct: 460 MINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAG 518
Query: 475 DVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSN 534
+++A +++ + P+ ++W TLLS C + ++ E R + E+EP + G I++SN
Sbjct: 519 RLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSN 577
Query: 535 MYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDR-THPETEIIYEELS 593
+YA+ G+W V ++S MK +KK A SW+EI+ + H F++ D +HP +E I E L
Sbjct: 578 LYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLE 637
Query: 594 KLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNI 653
+LIKK ++ G+ + V D +E K +S+ HSEKLA+A+ + + G IRI+KN+
Sbjct: 638 ELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGG--SIRILKNL 695
Query: 654 RVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
RVC DCH ++K S ++ R II RDS RFHHF G+CSC D W
Sbjct: 696 RVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/637 (35%), Positives = 348/637 (54%), Gaps = 35/637 (5%)
Query: 95 ALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEP 154
AL++A++ GSV R +F+ + +D V + ++ + G+ ++L++ S M+ F P
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 155 TDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLF 214
+YT +AL A L K +HG+I+ + V L +Y + G++ A +F
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 215 DRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF------ 268
+ M ++V W+ MI+ + +NG + +DLF M+ + P+E T+S+IL C
Sbjct: 306 NEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 269 -----------------------------QTGRIDDAGRLFHVIKEKDNVCWTTMIVGYT 299
+ ++D A +LF + K+ V W T+IVGY
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 300 QNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLL 359
G+ A +F E L V + + SS + +CA LAS+ G VHG A+ +
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 360 VSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQEN 419
VS++LIDMY KCG A +VFN M T +V SWN++I+GY+ +G +AL + D + +
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 420 LKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKA 479
KP+ TF+ VLS C +A L ++GQ F+S+ HGI P L+HY CM+ LLGRS +DKA
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 480 VDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAAC 539
+ LI+ +P++P+ +IW +LS + + + +A + ++ P + Y+++SNMYA
Sbjct: 606 MKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGA 665
Query: 540 GRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKL 599
+W +VASIR SMK VKK SWIE VH F HP+ ++I L L K
Sbjct: 666 KQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKA 725
Query: 600 QEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDC 659
AG+ P+ VL D +EEK K + HSE+LALAY L++ P I IMKN+R+C DC
Sbjct: 726 TRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDC 785
Query: 660 HLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
H MK S I+ R +++RD NRFHHF G CSC D+W
Sbjct: 786 HSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 230/503 (45%), Gaps = 76/503 (15%)
Query: 80 DLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSRE 139
D+ K D+ + N LL+A+ ++G +D LFD+MP R++VS+ T G+A ++
Sbjct: 74 DILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQD 129
Query: 140 ALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTD 199
+ ++SR+ ++ E + S L L +H IV N FV AL +
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 200 MYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVT 259
Y+ G +D AR +F+ + +++V W ++S Y++NG + + L M++ G P+ T
Sbjct: 190 AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 260 V--------------------SNILGACF---------------QTGRIDDAGRLFHVIK 284
IL C+ Q G + DA ++F+ +
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 285 EKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQV 344
+ D V W+ MI + QNG +A+ LF M V P++F++SS+++ CA G+
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 345 VHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQ 404
+HG V +G D D+ VS+ALID+Y KC D A +F + ++N VSWN++I GY G+
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 405 DLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERG-QNHFDSISAVHGITPSLDHY 463
+A +++ + L+ + TF S L AC + G Q H +I + ++ +
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN- 488
Query: 464 ACMINLLGRSSDVDKA----------------------------------VDLIKSLPHK 489
+I++ + D+ A +D++K K
Sbjct: 489 -SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 490 PNSLIWSTLLSVCAMKGDIKHGE 512
PN L + +LS C+ G I G+
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQ 570
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 161/380 (42%), Gaps = 45/380 (11%)
Query: 157 YTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDR 216
+ + + L C Q D K IH I+ ++F N L + Y K G A LFD
Sbjct: 50 HAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDE 109
Query: 217 MNNRNLVSWNLMISGYL------------KNG-------------------QPKKCIDLF 245
M RN VS+ + GY + G + + C L
Sbjct: 110 MPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLH 169
Query: 246 QEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEE 305
+ LG + + + ++ A G +D A +F I KD V W ++ Y +NG E
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 306 DALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALI 365
D+L L + M P+ ++ + + + L + + VHG+ + D V L+
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289
Query: 366 DMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSF 425
+Y + G DA+ VFN MP +VV W+ MI + QNG EA+ L+ ++ + + P+ F
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEF 349
Query: 426 TFVSVLSACLHADLFERGQNHFDSISAVHGITPS----LDHYA--CMINLLGRSSDVDKA 479
T S+L+ C G+ +HG+ LD Y +I++ + +D A
Sbjct: 350 TLSSILNGCAIGKCSGLGEQ-------LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 480 VDLIKSLPHKPNSLIWSTLL 499
V L L K N + W+T++
Sbjct: 403 VKLFAELSSK-NEVSWNTVI 421
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 316 SEDVRP--DKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGV 373
S+ + P D + +++ C + + +H + G DL ++ L++ Y K G
Sbjct: 40 SDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGF 99
Query: 374 TDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQEN--LKPDSFT----- 426
DA +F+ MP RN VS+ ++ GYA + + LY +L +E L P FT
Sbjct: 100 DKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 427 FVSV----LSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDL 482
FVS+ + LH+ + + G +DS + V A +IN VD A +
Sbjct: 156 FVSLDKAEICPWLHSPIVKLG---YDSNAFVG---------AALINAYSVCGSVDSARTV 203
Query: 483 IKSLPHKPNSLIWSTLLS 500
+ + K + ++W+ ++S
Sbjct: 204 FEGILCK-DIVVWAGIVS 220
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/600 (36%), Positives = 341/600 (56%), Gaps = 42/600 (7%)
Query: 99 AHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYT 158
A+A G ++ ALF + D + AI + G +A ++ ++ P ++T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 159 HVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMN 218
S L +C+ + GK IH ++ LG + +V L D+YAKGG++ A+ +FDRM
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 219 NRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGR 278
R+LVS MI+ Y K G ++ A
Sbjct: 189 ERSLVSSTAMITCYAKQGN-----------------------------------VEAARA 213
Query: 279 LFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSE-DVRPDKFSISSVVSSCAKLA 337
LF + E+D V W MI GY Q+G DAL+LF ++L+E +PD+ ++ + +S+C+++
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 338 SLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMIN 397
+L G+ +H + ++ V + LIDMY KCG ++A VFN P +++V+WN+MI
Sbjct: 274 ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Query: 398 GYAQNGQDLEALALYDKLLQ-ENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGI 456
GYA +G +AL L++++ L+P TF+ L AC HA L G F+S+ +GI
Sbjct: 334 GYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 457 TPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAAR 516
P ++HY C+++LLGR+ + +A + IK++ +S++WS++L C + GD G+ A
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAE 453
Query: 517 HLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFV 576
+L L N+G Y++LSN+YA+ G +E VA +R+ MK K + K S IEI+NKVH+F
Sbjct: 454 YLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFR 513
Query: 577 SEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYC 636
+ DR H +++ IY L K+ ++++ G+ PNT VL D +E EK +S+ HSE+LA+AY
Sbjct: 514 AGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYG 573
Query: 637 LIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
LI G +P++I KN+RVC DCH K S I GR I++RD NRFHHF G+CSC D W
Sbjct: 574 LISTKPG-SPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 198/382 (51%), Gaps = 30/382 (7%)
Query: 23 EEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLF 82
E ++ L+ C+ + K + +H+ L F ++ L+ YAK G + A+ +F
Sbjct: 130 EFTFSSLLKSCS----TKSGKLIHTHV-LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 83 DKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQ 142
D+MP R ++S A+++ +A+ G+V+ RALFD M RD VS+N I G+A GF +AL
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALM 244
Query: 143 VFSR-MQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMY 201
+F + + + + +P + T V+AL+AC+Q+ L G+ IH + + NV V L DMY
Sbjct: 245 LFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMY 304
Query: 202 AKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQ-LLGLNPDEVTV 260
+K G +++A +F+ +++V+WN MI+GY +G + + LF EMQ + GL P ++T
Sbjct: 305 SKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITF 364
Query: 261 SNILGACFQTGRIDDAGRLFHVIKEKDNV--------CWTTMIVGYTQNGKEEDALILFN 312
L AC G +++ R+F + ++ + C +++ G+ +
Sbjct: 365 IGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLL------GRAGQLKRAYE 418
Query: 313 EMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAV---VLGVD-DDLLVSSALIDMY 368
+ + ++ D SSV+ SC HG V GK + ++G++ + + L ++Y
Sbjct: 419 TIKNMNMDADSVLWSSVLGSCK-----LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIY 473
Query: 369 CKCGVTDDAWTVFNMMPTRNVV 390
G + V N+M + +V
Sbjct: 474 ASVGDYEGVAKVRNLMKEKGIV 495
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 171/437 (39%), Gaps = 107/437 (24%)
Query: 56 PNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDK 115
P L+ +L YA GK+ ++ LF + D+ + A +
Sbjct: 61 PRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAI------------------ 102
Query: 116 MPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRG 175
NTA + G +A ++ ++ P ++T S L +C+ + G
Sbjct: 103 ---------NTA----SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSG 145
Query: 176 KQIHGKIVVGNLGGNVFVRNALTDMYAKGGE----------------------------- 206
K IH ++ LG + +V L D+YAKGG+
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 207 --IDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLG-LNPDEVTVSNI 263
++ AR LFD M R++VSWN+MI GY ++G P + LFQ++ G PDE+TV
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 264 LGACFQTGRIDDAGRLFHVI------------------------------------KEKD 287
L AC Q G + + GR HV KD
Sbjct: 266 LSACSQIGAL-ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 324
Query: 288 NVCWTTMIVGYTQNGKEEDALILFNEMLS-EDVRPDKFSISSVVSSCAKLASLYHG-QVV 345
V W MI GY +G +DAL LFNEM ++P + + +CA + G ++
Sbjct: 325 IVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 384
Query: 346 HGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAW-TVFNMMPTRNVVSWNSMINGYAQNGQ 404
G+ + L+ + + G A+ T+ NM + V W+S++ +G
Sbjct: 385 ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Query: 405 DLEALALYDKLLQENLK 421
+ + + L+ N+K
Sbjct: 445 FVLGKEIAEYLIGLNIK 461
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 345/613 (56%), Gaps = 52/613 (8%)
Query: 94 NALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDR-F 152
N L++ + + G+ +FD+MP RD +++ + + S + L VFS +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 153 EPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARW 212
P D+ + + ACA L + G+Q+H +V + V+++L DMYAK G ++ A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 213 LFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGR 272
+FD + +N +SW M+SGY K +GR
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAK-----------------------------------SGR 186
Query: 273 IDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRP-DKFSISSVVS 331
++A LF ++ K+ WT +I G+ Q+GK +A +F EM E V D +SS+V
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 332 SCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVS 391
+CA LA+ G+ VHG + LG D + +S+ALIDMY KC A +F+ M R+VVS
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 392 WNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSIS 451
W S+I G AQ+GQ +ALALYD ++ +KP+ TFV ++ AC H E+G+ F S++
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 452 AVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHG 511
+GI PSL HY C+++LLGRS +D+A +LI ++P P+ W+ LLS C +G + G
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 512 EMAARHL---FELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEI 568
A HL F+L+ + YI+LSN+YA+ W V+ R + V+K +S +E+
Sbjct: 427 IRIADHLVSSFKLK--DPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEV 484
Query: 569 DNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEA-----GFSPNTKLVLHDTQEEEKVKS 623
+ F + + +HP E I+ +L+KKL+E G+ P+T +LHD E+EK K
Sbjct: 485 RKETEVFYAGETSHPLKEDIF----RLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540
Query: 624 ICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFH 683
+ +HSE+ A+AY L+K G TPIRI+KN+RVCGDCH+ +K S+I R II+RD+ R+H
Sbjct: 541 LFWHSERSAVAYGLLKAVPG-TPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYH 599
Query: 684 HFVGGNCSCKDNW 696
HF GG CSC D W
Sbjct: 600 HFKGGKCSCNDFW 612
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 174/316 (55%), Gaps = 10/316 (3%)
Query: 26 YTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKM 85
++ LV C + ++ +++ H ++ Y N + + L+ YAK G L A+ +FD +
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEY-ANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 86 PLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFS 145
+++ ISW A++S +A+SG ++ LF +P+++ S+ I+GF G EA VF+
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 146 RMQKDRFEPTDYTHVSAL-NACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKG 204
M+++R + D +S++ ACA L G+Q+HG ++ VF+ NAL DMYAK
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 205 GEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNIL 264
++ A+ +F RM +R++VSW +I G ++GQ +K + L+ +M G+ P+EVT ++
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 265 GACFQTGRIDDAGRLFHVIKEKDNV-----CWTTMIVGYTQNGKEEDALILFNEMLSEDV 319
AC G ++ LF + + + +T ++ ++G ++A L + M
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM---PF 403
Query: 320 RPDKFSISSVVSSCAK 335
PD+ + ++++S+C +
Sbjct: 404 PPDEPTWAALLSACKR 419
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 333 CAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSW 392
CA+ +L + +H V LG+ +++ L+++Y KCG A VF+ MP R+ ++W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 393 NSMINGYAQNGQDLEAL-ALYDKLLQENLKPDSFTFVSVLSACLHADLFERG-QNHFDSI 450
S++ Q + L L+PD F F +++ AC + + G Q H I
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 451 SAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKH 510
+ + + + ++++ + ++ A + S+ K N++ W+ ++S A G
Sbjct: 133 VSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGR--- 186
Query: 511 GEMAARHLFELEPI-NAGPYIMLSNMYAACGRWEDVASIRSSMKSKNV 557
+ A LF + P+ N + L + + G+ + S+ + M+ + V
Sbjct: 187 -KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/691 (33%), Positives = 367/691 (53%), Gaps = 78/691 (11%)
Query: 74 KLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFAN 133
K+ YA+DLF + N+L+ +A G + R +FD+M R+ VS+ + I G+A
Sbjct: 162 KMGYAKDLFVQ---------NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 134 KGFSREALQVFSRMQKD-RFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVF 192
+ F+++A+ +F RM +D P T V ++ACA+L DL G++++ I + N
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 193 VRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLG 252
+ +AL DMY K ID A+ LFD NL N M S Y++ G ++ + +F M G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 253 LNPDEVTVSNILGACFQTGRI-----------------------------------DDAG 277
+ PD +++ + + +C Q I D A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 278 RLFHVIKEKDNVCWTTMIVGYTQNGKE-------------------------------ED 306
R+F + K V W +++ GY +NG+ E+
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 307 ALILFNEMLS-EDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALI 365
A+ +F M S E V D ++ S+ S+C L +L + ++ G+ D+ + + L+
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 366 DMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSF 425
DM+ +CG + A ++FN + R+V +W + I A G A+ L+D ++++ LKPD
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 426 TFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKS 485
FV L+AC H L ++G+ F S+ +HG++P HY CM++LLGR+ +++AV LI+
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 486 LPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDV 545
+P +PN +IW++LL+ C ++G+++ AA + L P G Y++LSN+YA+ GRW D+
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 546 ASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFS 605
A +R SMK K ++K S I+I K H+F S D +HPE I L ++ ++ G
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
Query: 606 PNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKF 665
P+ VL D E+EK+ + HSEKLA+AY LI G T IRI+KN+RVC DCH F KF
Sbjct: 753 PDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTT-IRIVKNLRVCSDCHSFAKF 811
Query: 666 ASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
AS + R IILRD+NRFH+ G CSC D W
Sbjct: 812 ASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 184/369 (49%), Gaps = 40/369 (10%)
Query: 124 YNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIV 183
YN+ I G+A+ G EA+ +F RM P YT L+ACA+ G QIHG IV
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 184 VGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCID 243
++FV+N+L YA+ GE+D AR +FD M+ RN+VSW MI GY + K +D
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 244 LFQEM-QLLGLNPDEVTVSNILGAC-----FQTGR------------------------- 272
LF M + + P+ VT+ ++ AC +TG
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 273 -----IDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSIS 327
ID A RLF + M Y + G +AL +FN M+ VRPD+ S+
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 328 SVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTR 387
S +SSC++L ++ G+ HG + G + + +ALIDMY KC D A+ +F+ M +
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 388 NVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHF 447
VV+WNS++ GY +NG+ A ++ + ++N+ ++ +++S + LFE F
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVF 457
Query: 448 DSISAVHGI 456
S+ + G+
Sbjct: 458 CSMQSQEGV 466
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 168/352 (47%), Gaps = 35/352 (9%)
Query: 189 GNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNL----VSWNLMISGYLKNGQPKKCIDL 244
G F+ N+L YA G ++A LF RM N + ++ +S K+ I +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 245 FQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKE 304
+ +G D ++++ + G +D A ++F + E++ V WT+MI GY +
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 305 EDALILFNEML-SEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSA 363
+DA+ LF M+ E+V P+ ++ V+S+CAKL L G+ V+ G++ + L+ SA
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 364 LIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPD 423
L+DMY KC D A +F+ N+ N+M + Y + G EAL +++ ++ ++PD
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 424 SFTFVSVLSAC-----------LHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGR 472
+ +S +S+C H + G +D+I +I++ +
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA------------LIDMYMK 384
Query: 473 SSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEM-AARHLFELEP 523
D A + + +K + W+++++ G +++GE+ AA FE P
Sbjct: 385 CHRQDTAFRIFDRMSNK-TVVTWNSIVA-----GYVENGEVDAAWETFETMP 430
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 148/307 (48%), Gaps = 10/307 (3%)
Query: 33 CTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIIS 92
C+++ ++ K ++ N +E + N L+ Y K + A +FD+M + +++
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDN-ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 93 WNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRF 152
WN++++ + +G V F+ MP ++ VS+NT I+G EA++VF MQ
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 153 EPTD-YTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKAR 211
D T +S +AC L L K I+ I + +V + L DM+++ G+ + A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 212 WLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTG 271
+F+ + NR++ +W I G ++ I+LF +M GL PD V L AC G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 272 RIDDAGRLFHVIKE-----KDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSI 326
+ +F+ + + ++V + M+ + G E+A+ L +M E P+
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME---PNDVIW 642
Query: 327 SSVVSSC 333
+S++++C
Sbjct: 643 NSLLAAC 649
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/717 (32%), Positives = 383/717 (53%), Gaps = 83/717 (11%)
Query: 17 RGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNT-TFLHNRLLHFYAKSGKL 75
R + T E + VL C + L++R+ ++ P+ L+ +++ Y +S +L
Sbjct: 27 RSFSVTVEFQNREVLICNHL----LSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRL 82
Query: 76 FYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKG 135
A +LFD+MP+RD++SWN+++S G + LFD+MP R VS+ + G G
Sbjct: 83 VDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSG 142
Query: 136 FSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRN 195
+A ++F +M P T +A N+ +HG
Sbjct: 143 KVDQAERLFYQM------PVKDT--AAWNS-----------MVHG--------------- 168
Query: 196 ALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNP 255
Y + G++D A LF +M +N++SW MI G +N + + +DLF+ M +
Sbjct: 169 -----YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKS 223
Query: 256 DEVTVSNILGAC-----FQTG------------------------------RIDDAGRLF 280
+ ++ AC F G RI D+ ++F
Sbjct: 224 TSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF 283
Query: 281 HVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLY 340
+ WT ++ GY+ N K EDAL +F+ ML + P++ + +S ++SC+ L +L
Sbjct: 284 DEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD 343
Query: 341 HGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYA 400
G+ +HG AV LG++ D V ++L+ MY G +DA +VF + +++VSWNS+I G A
Sbjct: 344 WGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCA 403
Query: 401 QNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISA-VHGITPS 459
Q+G+ A ++ ++++ N +PD TF +LSAC H E+G+ F +S+ ++ I
Sbjct: 404 QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRK 463
Query: 460 LDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLF 519
+ HY CM+++LGR + +A +LI+ + KPN ++W LLS C M D+ GE AA +F
Sbjct: 464 IQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF 523
Query: 520 ELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSED 579
L+ ++ Y++LSN+YA+ GRW +V+ +R MK + K SW+ I K H+F S D
Sbjct: 524 NLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD 583
Query: 580 RTHPETEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIK 639
+ P IYE+L L +KL+E G++P+ + LHD ++E+K + + YHSE+LA+A+ LI
Sbjct: 584 Q--PHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLIN 641
Query: 640 KPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
G + + +MKN+RVC DCH +K S ++GR I+LRD RFHHF G CSC D W
Sbjct: 642 TVEG-SAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/625 (35%), Positives = 346/625 (55%), Gaps = 38/625 (6%)
Query: 108 DLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACA 167
D R +FD+M +RDSVSYNT I G+ E++++F D+F+P T S L AC
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACG 318
Query: 168 QLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNL 227
L DL K I+ ++ VRN L D+YAK G++ AR +F+ M ++ VSWN
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 228 MISGYLKNGQPKKCIDLFQEMQLLGLNPDEVT------VSNIL----------------G 265
+ISGY+++G + + LF+ M ++ D +T VS L G
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 266 ACF-------------QTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFN 312
C + G + D+ ++F + D V W T+I + G L +
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 313 EMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCG 372
+M +V PD + + CA LA+ G+ +H + G + +L + +ALI+MY KCG
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 373 VTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLS 432
+++ VF M R+VV+W MI Y G+ +AL + + + + PDS F++++
Sbjct: 559 CLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIY 618
Query: 433 ACLHADLFERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNS 492
AC H+ L + G F+ + + I P ++HYAC+++LL RS + KA + I+++P KP++
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA 678
Query: 493 LIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSM 552
IW+++L C GD++ E +R + EL P + G I+ SN YAA +W+ V+ IR S+
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSL 738
Query: 553 KSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVL 612
K K++ K YSWIE+ VH F S D + P++E IY+ L L + + G+ P+ + V
Sbjct: 739 KDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVS 798
Query: 613 HD-TQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIG 671
+ +EEEK + IC HSE+LA+A+ L+ G TP+++MKN+RVCGDCH K S I+G
Sbjct: 799 QNLEEEEEKRRLICGHSERLAIAFGLLNTEPG-TPLQVMKNLRVCGDCHEVTKLISKIVG 857
Query: 672 RTIILRDSNRFHHFVGGNCSCKDNW 696
R I++RD+NRFH F G CSCKD W
Sbjct: 858 REILVRDANRFHLFKDGTCSCKDRW 882
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 221/432 (51%), Gaps = 42/432 (9%)
Query: 117 PIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGK 176
P ++ +N+ I F+ G EAL+ + ++++ + P YT S + ACA L D G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 177 QIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNG 236
++ +I+ ++FV NAL DMY++ G + +AR +FD M R+LVSWN +ISGY +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 237 QPKKCIDLFQEMQLLGLNPDEVTVSNILGAC----------------------------- 267
++ ++++ E++ + PD TVS++L A
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 268 ------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRP 321
+ R DA R+F + +D+V + TMI GY + E+++ +F E L + +P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKP 305
Query: 322 DKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVF 381
D ++SSV+ +C L L + ++ + G + V + LID+Y KCG A VF
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 382 NMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLH-ADL- 439
N M ++ VSWNS+I+GY Q+G +EA+ L+ ++ + D T++ ++S ADL
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 440 FERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLL 499
F +G H + I + GI L +I++ + +V ++ + S+ +++ W+T++
Sbjct: 426 FGKGL-HSNGIKS--GICIDLSVSNALIDMYAKCGEVGDSLKIFSSM-GTGDTVTWNTVI 481
Query: 500 SVCAMKGDIKHG 511
S C GD G
Sbjct: 482 SACVRFGDFATG 493
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 204/402 (50%), Gaps = 37/402 (9%)
Query: 68 FYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTA 127
F A+ G L Y + + D D+ NAL+ ++R G + R +FD+MP+RD VS+N+
Sbjct: 120 FDAEMGDLVYEQ-ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSL 178
Query: 128 IAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNL 187
I+G+++ G+ EAL+++ ++ P +T S L A LL +++G+ +HG + +
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 188 GGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQE 247
V V N L MY K AR +FD M+ R+ VS+N MI GYLK ++ + +F E
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 248 MQLLGLNPDEVTVSNILGAC-----------------------------------FQTGR 272
L PD +TVS++L AC + G
Sbjct: 299 -NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 273 IDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSS 332
+ A +F+ ++ KD V W ++I GY Q+G +A+ LF M+ + + D + ++S
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 333 CAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSW 392
+LA L G+ +H + G+ DL VS+ALIDMY KCG D+ +F+ M T + V+W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 393 NSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC 434
N++I+ + G L + ++ + + PD TF+ L C
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 14/276 (5%)
Query: 89 DIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
D+ NAL+ +A+ G V D +F M D+V++NT I+ G LQV ++M+
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 149 KDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEID 208
K P T + L CA L R GK+IH ++ + + NAL +MY+K G ++
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLE 561
Query: 209 KARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF 268
+ +F+RM+ R++V+W MI Y G+ +K ++ F +M+ G+ PD V I+ AC
Sbjct: 562 NSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Query: 269 QTGRIDDAGRLFHVIKEKDNV--------CWTTMIVGYTQNGKEEDALILFNEMLSEDVR 320
+G +D+ F +K + C ++ + K E+ + + ++
Sbjct: 622 HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI------QAMPIK 675
Query: 321 PDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDD 356
PD +SV+ +C + + V + + L DD
Sbjct: 676 PDASIWASVLRACRTSGDMETAERVSRRIIELNPDD 711
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 326 ISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMM- 384
IS +SS + L L + +H + LG+D S LID Y + +VF +
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 385 PTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLF--ER 442
P +NV WNS+I +++NG EAL Y KL + + PD +TF SV+ AC A LF E
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEM 124
Query: 443 GQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLS 500
G ++ I + G L ++++ R + +A + +P + + + W++L+S
Sbjct: 125 GDLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLIS 180
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 42 AKRLQSHMD---LNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLS 98
AKRL + L F + + N L+ Y+K G L + +F++M RD+++W ++
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 99 AHARSGSVQDLRALFDKMP----IRDSVSYNTAIAGFANKGFSREALQVFSRMQ 148
A+ G + F M + DSV + I ++ G E L F +M+
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/677 (33%), Positives = 360/677 (53%), Gaps = 75/677 (11%)
Query: 63 NRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSV 122
N L+ Y K + A +FD MP R+++SW+AL+S H +G DL+
Sbjct: 45 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG---DLKG----------- 90
Query: 123 SYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKI 182
+L +FS M + P ++T + L AC L L +G QIHG
Sbjct: 91 -----------------SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFC 133
Query: 183 VVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCI 242
+ V V N+L DMY+K G I++A +F R+ +R+L+SWN MI+G++ G K +
Sbjct: 134 LKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKAL 193
Query: 243 DLFQEMQLLGLN--PDEVTVSNILGACFQTGRID-------------------------- 274
D F MQ + PDE T++++L AC TG I
Sbjct: 194 DTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSL 253
Query: 275 -----------DAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDK 323
A + F IKEK + W+++I+GY Q G+ +A+ LF + + + D
Sbjct: 254 VDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS 313
Query: 324 FSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNM 383
F++SS++ A A L G+ + AV L + V ++++DMY KCG+ D+A F
Sbjct: 314 FALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAE 373
Query: 384 MPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERG 443
M ++V+SW +I GY ++G +++ ++ ++L+ N++PD +++VLSAC H+ + + G
Sbjct: 374 MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 444 QNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCA 503
+ F + HGI P ++HYAC+++LLGR+ + +A LI ++P KPN IW TLLS+C
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493
Query: 504 MKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAY 563
+ GDI+ G+ + L ++ N Y+M+SN+Y G W + + R K +KK A
Sbjct: 494 VHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGM 553
Query: 564 SWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKL-QEAGFSPNTKLVLHDTQEEEKVK 622
SW+EI+ +VH F S + +HP T +I E L + ++L +E G+ K LHD +E K +
Sbjct: 554 SWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEE 613
Query: 623 SICYHSEKLALAYCLIK---KPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDS 679
++ HSEKLA+ L G T IR+ KN+RVC DCH F+K S I ++RD+
Sbjct: 614 NLRAHSEKLAIGLALATGGLNQKGKT-IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDA 672
Query: 680 NRFHHFVGGNCSCKDNW 696
RFH F G CSC D W
Sbjct: 673 VRFHSFEDGCCSCGDYW 689
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 37/287 (12%)
Query: 9 QAIDTLYSRGQAATEE-----AYTQLVLDCTRVNDVELAKRLQSHM-DLNFYEPNTTFLH 62
+A+DT +A +E T L+ C+ + K++ + F+ P++ +
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 63 NRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSV 122
L+ Y K G LF AR FD++ + +ISW++L+ +A+ G
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV--------------- 295
Query: 123 SYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKI 182
EA+ +F R+Q+ + + S + A LR+GKQ+
Sbjct: 296 ----------------EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 183 VVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCI 242
V G V N++ DMY K G +D+A F M ++++SW ++I+GY K+G KK +
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 243 DLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNV 289
+F EM + PDEV +L AC +G I + LF + E +
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%)
Query: 325 SISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMM 384
++ S++ C + G VH + G +L+ S+ LIDMYCKC A+ VF+ M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 385 PTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERG 443
P RNVVSW+++++G+ NG +L+L+ ++ ++ + P+ FTF + L AC + E+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/663 (33%), Positives = 367/663 (55%), Gaps = 36/663 (5%)
Query: 69 YAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAI 128
YAK GK +A L ++ NAL++ + R G + + +M D V++N+ I
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 129 AGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLG 188
G+ +EAL+ FS M + + + S + A +L +L G ++H ++
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 189 GNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEM 248
N+ V N L DMY+K F RM++++L+SW +I+GY +N + ++LF+++
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 249 QLLGLNPDEVTVSNILGAC----------------FQTGRIDD----------------- 275
+ DE+ + +IL A + G +D
Sbjct: 479 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMG 538
Query: 276 -AGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCA 334
A R+F IK KD V WT+MI NG E +A+ LF M+ + D ++ ++S+ A
Sbjct: 539 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 335 KLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNS 394
L++L G+ +H + G + ++ A++DMY CG A VF+ + + ++ + S
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 395 MINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVH 454
MIN Y +G A+ L+DK+ EN+ PD +F+++L AC HA L + G+ + +
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 455 GITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMA 514
+ P +HY C++++LGR++ V +A + +K + +P + +W LL+ C + + GE+A
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 515 ARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHK 574
A+ L ELEP N G +++SN++A GRW DV +R+ MK+ ++K SWIE+D KVHK
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838
Query: 575 FVSEDRTHPETEIIYEELSKLIKKLQ-EAGFSPNTKLVLHDTQEEEKVKSICYHSEKLAL 633
F + D++HPE++ IYE+LS++ +KL+ E G+ +TK VLH+ E EKV+ + HSE++A+
Sbjct: 839 FTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAI 898
Query: 634 AYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCK 693
AY L++ P +RI KN+RVC DCH F K S + R I++RD+NRFHHF G CSC
Sbjct: 899 AYGLLRTPDRAC-LRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCG 957
Query: 694 DNW 696
D+W
Sbjct: 958 DSW 960
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 223/460 (48%), Gaps = 62/460 (13%)
Query: 96 LLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPT 155
L+ + + GS+ D +FD+MP R + ++NT I + + G AL ++ M+ +
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 156 DYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFD 215
+ + L ACA+L D+R G ++H +V F+ NAL MYAK ++ AR LFD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 216 RMNNR-NLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGAC------- 267
+ + V WN ++S Y +G+ + ++LF+EM + G P+ T+ + L AC
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 268 -----------------------------FQTGRIDDAGRLFHVIKEKDNVCWTTMIVGY 298
+ G++ A R+ + D V W ++I GY
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 299 TQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDL 358
QN ++AL F++M++ + D+ S++S++++ +L++L G +H + G D +L
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 359 LVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQE 418
V + LIDMY KC +T F M ++++SW ++I GYAQN +EAL L+ + ++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 419 NLKPDSFTFVSVLSAC-----------LHADLFERGQNHFDSISAVHGITPSLDHYACMI 467
++ D S+L A +H + +G D++ ++
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL--LDTVIQNE-----------LV 528
Query: 468 NLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGD 507
++ G+ ++ A + +S+ K + + W++++S A+ G+
Sbjct: 529 DVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 567
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 331/591 (56%), Gaps = 40/591 (6%)
Query: 110 RALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQL 169
R + + + R+ + I G+A +G EA+ ++ M+K+ P +T + L AC +
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 170 LDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMI 229
DL G+Q H + V+V N + DMY K ID AR +FD M R+++SW +I
Sbjct: 163 KDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELI 222
Query: 230 SGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNV 289
+ Y + G ++ A LF + KD V
Sbjct: 223 AAYAR-----------------------------------VGNMECAAELFESLPTKDMV 247
Query: 290 CWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKL-ASLYHGQVVH-G 347
WT M+ G+ QN K ++AL F+ M +R D+ +++ +S+CA+L AS Y + V
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 348 KAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLE 407
+ D +++ SALIDMY KCG ++A VF M +NV +++SMI G A +G+ E
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 408 ALALYDKLL-QENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACM 466
AL L+ ++ Q +KP++ TFV L AC H+ L ++G+ FDS+ G+ P+ DHY CM
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCM 427
Query: 467 INLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINA 526
++LLGR+ + +A++LIK++ +P+ +W LL C + + + E+AA HLFELEP
Sbjct: 428 VDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDII 487
Query: 527 GPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSW-IEIDNKVHKFVSEDRTHPET 585
G YI+LSN+YA+ G W V +R +K K +KK A SW ++ + ++HKF + HP +
Sbjct: 488 GNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMS 547
Query: 586 EIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVT 645
I ++L +L+++L G+ P+ V +D + K + H+EKLALA+ L+ T
Sbjct: 548 NKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDST 607
Query: 646 PIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
I IMKN+R+C DCH FM+ AS++ G+ II+RD+ RFHHF G+CSC D W
Sbjct: 608 -ITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 163/320 (50%), Gaps = 18/320 (5%)
Query: 25 AYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLH--NRLLHFYAKSGKLFYARDLF 82
++ L+ C + D+ L ++ + F F++ N ++ Y K + AR +F
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQ---TFRLRGFCFVYVGNTMIDMYVKCESIDCARKVF 207
Query: 83 DKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQ 142
D+MP RD+ISW L++A+AR G+++ LF+ +P +D V++ + GFA +EAL+
Sbjct: 208 DEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267
Query: 143 VFSRMQKDRFEPTDYTHVSALNACAQLLDLR---RGKQIHGKIVVGNLGGNVFVRNALTD 199
F RM+K + T ++ACAQL + R QI K + +V + +AL D
Sbjct: 268 YFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY-SPSDHVVIGSALID 326
Query: 200 MYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEM-QLLGLNPDEV 258
MY+K G +++A +F MNN+N+ +++ MI G +G+ ++ + LF M + P+ V
Sbjct: 327 MYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Query: 259 TVSNILGACFQTGRIDDAGRLFHVIKEKDNVC-----WTTMIVGYTQNGKEEDALILFNE 313
T L AC +G +D ++F + + V +T M+ + G+ ++AL L
Sbjct: 387 TFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKT 446
Query: 314 MLSEDVRPDKFSISSVVSSC 333
M V P +++ +C
Sbjct: 447 M---SVEPHGGVWGALLGAC 463
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 188/474 (39%), Gaps = 139/474 (29%)
Query: 32 DCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLF--YARDLFDKMPLRD 89
DC +N + K++ H+ L + ++ +L+ K G YAR + + + R+
Sbjct: 58 DCINLNQI---KQIHGHV-LRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRN 113
Query: 90 IISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQK 149
W A+ I G+A +G EA+ ++ M+K
Sbjct: 114 PFLWTAV-------------------------------IRGYAIEGKFDEAIAMYGCMRK 142
Query: 150 DRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDK 209
+ P +T + L AC + DL G+Q H + V+V N + DMY K ID
Sbjct: 143 EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDC 202
Query: 210 ARWLFDRMNNRNLVS-------------------------------WNLMISGYLKNGQP 238
AR +FD M R+++S W M++G+ +N +P
Sbjct: 203 ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKP 262
Query: 239 KKCIDLFQEMQLLGLNPDEVTVSNILGACFQ----------------------------- 269
++ ++ F M+ G+ DEVTV+ + AC Q
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGS 322
Query: 270 --------TGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSE-DVR 320
G +++A +F + K+ +++MI+G +G+ ++AL LF+ M+++ +++
Sbjct: 323 ALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIK 382
Query: 321 PDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTV 380
P+ + + +C+ + G V G+ V D +
Sbjct: 383 PNTVTFVGALMACS-----HSGLVDQGRQVF-----------------------DSMYQT 414
Query: 381 FNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSAC 434
F + PTR+ + M++ + G+ EAL L + +++P + ++L AC
Sbjct: 415 FGVQPTRD--HYTCMVDLLGRTGRLQEALELIKTM---SVEPHGGVWGALLGAC 463
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 41/278 (14%)
Query: 276 AGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAK 335
A R+ ++ ++ WT +I GY GK ++A+ ++ M E++ P F+ S+++ +C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 336 LASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVS---- 391
+ L G+ H + L + V + +IDMY KC D A VF+ MP R+V+S
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 392 ---------------------------WNSMINGYAQNGQDLEALALYDKLLQENLKPDS 424
W +M+ G+AQN + EAL +D++ + ++ D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 425 FTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHY---ACMINLLGRSSDVDKAVD 481
T +SAC + + I+ G +PS DH + +I++ + +V++AV+
Sbjct: 282 VTVAGYISACAQLGA-SKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEAVN 339
Query: 482 LIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLF 519
+ S+ +K N +S+++ A G + A HLF
Sbjct: 340 VFMSMNNK-NVFTYSSMILGLATHGRAQE----ALHLF 372
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 315 LSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVT 374
SE + +SS++S +L + +HG + G+D + + LI K GV
Sbjct: 38 FSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVP 97
Query: 375 DDAWT--VFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLS 432
D + V + RN W ++I GYA G+ EA+A+Y + +E + P SFTF ++L
Sbjct: 98 MDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 157
Query: 433 ACLHADLFERGQNHFDSISAVHGITPSLDHYA------CMINLLGRSSDVDKAVDLIKSL 486
AC G+ H T L + MI++ + +D A + +
Sbjct: 158 ACGTMKDLNLGRQ-------FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 487 PHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEP 523
P + + + W+ L++ A G+++ A LFE P
Sbjct: 211 PER-DVISWTELIAAYARVGNME----CAAELFESLP 242
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/590 (35%), Positives = 336/590 (56%), Gaps = 8/590 (1%)
Query: 110 RALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFE-PTDYTHVSALNACAQ 168
R L P D+ +NT + G++ ++ VF M + F P ++ + A
Sbjct: 59 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118
Query: 169 LLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLM 228
LR G Q+H + + L ++FV L MY G ++ AR +FD M+ NLV+WN +
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 229 ISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDN 288
I+ + ++F +M L + + + +L + G ++ A R+F + +D+
Sbjct: 179 ITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 289 VCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGK 348
V W+TMIVG NG ++ + F E+ + P++ S++ V+S+C++ S G+++HG
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 349 AVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVF-NMMPTRNVVSWNSMINGYAQNGQDLE 407
G + V++ALIDMY +CG A VF M R +VSW SMI G A +GQ E
Sbjct: 295 VEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE 354
Query: 408 ALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMI 467
A+ L++++ + PD +F+S+L AC HA L E G+++F + V+ I P ++HY CM+
Sbjct: 355 AVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV 414
Query: 468 NLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAG 527
+L GRS + KA D I +P P +++W TLL C+ G+I+ E + L EL+P N+G
Sbjct: 415 DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSG 474
Query: 528 PYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEI 587
++LSN YA G+W+DVASIR SM + +KK A+S +E+ ++KF + ++
Sbjct: 475 DLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIE 534
Query: 588 IYEELSKLIKKLQ-EAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTP 646
+E+L ++I +L+ EAG++P L+D +EEEK + HSEKLALA+ L + G
Sbjct: 535 AHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGAN- 593
Query: 647 IRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
IRI+KN+R+C DCH MK S + G I++RD NRFH F G+CSC+D W
Sbjct: 594 IRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 158/304 (51%), Gaps = 18/304 (5%)
Query: 39 VELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLS 98
VE A+++ M ++PN N ++ + + AR++FDKM +R+ SWN +L+
Sbjct: 157 VEFARKVFDEM----HQPNLVAW-NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLA 211
Query: 99 AHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYT 158
+ ++G ++ + +F +MP RD VS++T I G A+ G E+ F +Q+ P + +
Sbjct: 212 GYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVS 271
Query: 159 HVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMN 218
L+AC+Q GK +HG + V V NAL DMY++ G + AR +F+ M
Sbjct: 272 LTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 331
Query: 219 N-RNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDA- 276
R +VSW MI+G +GQ ++ + LF EM G+ PD ++ ++L AC G I++
Sbjct: 332 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Query: 277 ------GRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVV 330
R++H+ E ++ + M+ Y ++GK + A +M + P +++
Sbjct: 392 DYFSEMKRVYHIEPEIEH--YGCMVDLYGRSGKLQKAYDFICQM---PIPPTAIVWRTLL 446
Query: 331 SSCA 334
+C+
Sbjct: 447 GACS 450
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 128/273 (46%), Gaps = 20/273 (7%)
Query: 276 AGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSED-VRPDKFSISSVVSSCA 334
A RL E D + T++ GY+++ + +++ +F EM+ + V PD FS + V+ +
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 335 KLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNS 394
SL G +H +A+ G++ L V + LI MY CG + A VF+ M N+V+WN+
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 395 MINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVH 454
+I + A ++DK+L N ++ +L+ + A E + F +
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRN----HTSWNVMLAGYIKAGELESAKRIFSEMPHRD 233
Query: 455 GITPSLDHYACMINLLGRSSDVDKAVDLIKSLPH---KPNSLIWSTLLSVCAMKGDIKHG 511
++ ++ MI + + +++ + L PN + + +LS C+ G + G
Sbjct: 234 DVS-----WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 512 EMAARHLFELEPINAGPYIMLSN----MYAACG 540
++ H F +E + ++N MY+ CG
Sbjct: 289 KIL--HGF-VEKAGYSWIVSVNNALIDMYSRCG 318
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/616 (33%), Positives = 334/616 (54%), Gaps = 46/616 (7%)
Query: 122 VSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGK 181
+S N I +G ++A++V S+ P+ T+ + C L ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 182 IVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKC 241
I+ + F+ L MY+ G +D AR +FD+ R + WN + G ++
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 242 IDLFQEMQLLGLNPDEVTVSNILGACFQT------------------------------- 270
+ L+ +M +G+ D T + +L AC +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 271 --------GRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSE--DVR 320
G +D A +F + ++ V W+ MI Y +NGK +AL F EM+ E D
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 321 PDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTV 380
P+ ++ SV+ +CA LA+L G+++HG + G+D L V SAL+ MY +CG + V
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 381 FNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSFTFVSVLSACLHADLF 440
F+ M R+VVSWNS+I+ Y +G +A+ +++++L P TFVSVL AC H L
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 441 ERGQNHFDSISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLS 500
E G+ F+++ HGI P ++HYACM++LLGR++ +D+A +++ + +P +W +LL
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
Query: 501 VCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKKF 560
C + G+++ E A+R LF LEP NAG Y++L+++YA W++V ++ ++ + ++K
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522
Query: 561 AAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEK 620
W+E+ K++ FVS D +P E I+ L KL + ++E G+ P TK VL++ + EEK
Sbjct: 523 PGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582
Query: 621 VKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKFASDIIGRTIILRDSN 680
+ + HSEKLALA+ LI G PIRI KN+R+C DCHLF KF S + + I++RD N
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKG-EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVN 641
Query: 681 RFHHFVGGNCSCKDNW 696
RFH F G CSC D W
Sbjct: 642 RFHRFKNGVCSCGDYW 657
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 187/440 (42%), Gaps = 86/440 (19%)
Query: 6 KLRQAIDTLYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRL 65
KL+QAI L S+ + +++ Y L+L C + + A R+ H+ L+ FL +L
Sbjct: 61 KLKQAIRVL-SQESSPSQQTYELLILCCGHRSSLSDALRVHRHI-LDNGSDQDPFLATKL 118
Query: 66 LHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYN 125
+ Y+ G + YAR +FDK R I WNAL A
Sbjct: 119 IGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRA-------------------------- 152
Query: 126 TAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACA----QLLDLRRGKQIHGK 181
G E L ++ +M + E +T+ L AC + L +GK+IH
Sbjct: 153 -----LTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAH 207
Query: 182 IVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKC 241
+ +V++ L DMYA+ G +D A ++F M RN+VSW+ MI+ Y KNG+ +
Sbjct: 208 LTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEA 267
Query: 242 IDLFQEM--QLLGLNPDEVTVSNILGACF------------------------------- 268
+ F+EM + +P+ VT+ ++L AC
Sbjct: 268 LRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALV 327
Query: 269 ----QTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKF 324
+ G+++ R+F + ++D V W ++I Y +G + A+ +F EML+ P
Sbjct: 328 TMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPV 387
Query: 325 SISSVVSSCAKLASLYHGQVVHGKAVVL------GVDDDLLVSSALIDMYCKCGVTDDAW 378
+ SV+ +C+ + G V GK + G+ + + ++D+ + D+A
Sbjct: 388 TFVSVLGACS-----HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442
Query: 379 TVFNMMPTR-NVVSWNSMIN 397
+ M T W S++
Sbjct: 443 KMVQDMRTEPGPKVWGSLLG 462
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/529 (38%), Positives = 308/529 (58%), Gaps = 38/529 (7%)
Query: 205 GEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNIL 264
G++ AR +FD M+ + WN + GY++N P + + L+++M+ LG+ PDE T ++
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 265 GACFQTG-----------------------------------RIDDAGRLFHVIKEKDNV 289
A Q G + A LF ++ KD V
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 290 CWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKA 349
W + Q G AL FN+M ++ V+ D F++ S++S+C +L SL G+ ++ +A
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 350 VVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEAL 409
+D +++V +A +DM+ KCG T+ A +F M RNVVSW++MI GYA NG EAL
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 410 ALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSI--SAVHGITPSLDHYACMI 467
L+ + E L+P+ TF+ VLSAC HA L G+ +F + S + P +HYACM+
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 468 NLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAG 527
+LLGRS +++A + IK +P +P++ IW LL CA+ D+ G+ A L E P
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGS 416
Query: 528 PYIMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEI 587
+++LSN+YAA G+W+ V +RS M+ KK AAYS +E + K+H F D++HP+++
Sbjct: 417 YHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKA 476
Query: 588 IYEELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPI 647
IYE+L +++KK+++ G+ P+T V HD + EEK S+ +HSEKLA+A+ LIK G PI
Sbjct: 477 IYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPG-HPI 535
Query: 648 RIMKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
R+MKN+R C DCH F KF S + II+RD NRFHHF G CSCK+ W
Sbjct: 536 RVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 163/352 (46%), Gaps = 63/352 (17%)
Query: 63 NRLLHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSV 122
L+ Y K G+L A LF+ M ++D+++WNA L+ ++G
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG------------------ 189
Query: 123 SYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKI 182
N+AI AL+ F++M D + +T VS L+AC QL L G++I+ +
Sbjct: 190 --NSAI-----------ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 183 VVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCI 242
+ N+ V NA DM+ K G + AR LF+ M RN+VSW+ MI GY NG ++ +
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 243 DLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKEKDNVC-------WTTMI 295
LF MQ GL P+ VT +L AC G +++ R F ++ + ++ + M+
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 296 VGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVD 355
++G E+A +M V PD +++ +CA H ++ G+ V
Sbjct: 357 DLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACA-----VHRDMILGQKVA---- 404
Query: 356 DDLLVSSA---------LIDMYCKCG---VTDDAWTVFNMMPTRNVVSWNSM 395
D+LV +A L ++Y G D + + T+ V +++S+
Sbjct: 405 -DVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 51/367 (13%)
Query: 110 RALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQL 169
R +FD+M +NT G+ E+L ++ +M+ P ++T+ + A +QL
Sbjct: 63 RQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL 122
Query: 170 LDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMI 229
D G +H +V G V L MY K GE+ A +LF+ M ++LV+WN +
Sbjct: 123 GDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFL 182
Query: 230 SGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRID--------------- 274
+ ++ G ++ F +M + D TV ++L AC Q G ++
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Query: 275 -------------------DAGR-LFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEM 314
+A R LF +K+++ V W+TMIVGY NG +AL LF M
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Query: 315 LSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGK---AVVLGVDDDLLVS-----SALID 366
+E +RP+ + V+S+C+ + G V GK ++++ +D L + ++D
Sbjct: 303 QNEGLRPNYVTFLGVLSACS-----HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357
Query: 367 MYCKCGVTDDAWTVFNMMPTR-NVVSWNSMINGYAQNGQDLEALALYDKLLQENLKPDSF 425
+ + G+ ++A+ MP + W +++ A + + + D L++ PD
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVET--APDIG 415
Query: 426 TFVSVLS 432
++ +LS
Sbjct: 416 SYHVLLS 422
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 135/282 (47%), Gaps = 4/282 (1%)
Query: 228 MISGYLK--NGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACFQTGRIDDAGRLFHVIKE 285
M+S L+ + +PK+ + + G + ++ +L G + A ++F + +
Sbjct: 12 MLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHK 71
Query: 286 KDNVCWTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVV 345
W T+ GY +N ++L+L+ +M VRPD+F+ VV + ++L G +
Sbjct: 72 PRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFAL 131
Query: 346 HGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQD 405
H V G +V++ L+ MY K G A +F M +++V+WN+ + Q G
Sbjct: 132 HAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNS 191
Query: 406 LEALALYDKLLQENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYAC 465
AL ++K+ + ++ DSFT VS+LSAC E G+ +D + I ++
Sbjct: 192 AIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR-ARKEEIDCNIIVENA 250
Query: 466 MINLLGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGD 507
+++ + + + A L + + + N + WST++ AM GD
Sbjct: 251 RLDMHLKCGNTEAARVLFEEMKQR-NVVSWSTMIVGYAMNGD 291
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/647 (34%), Positives = 340/647 (52%), Gaps = 80/647 (12%)
Query: 121 SVSYNTAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSA----LNACAQLLDLRRGK 176
SV TAIA +KG REA Q RF +T+ S + +C L GK
Sbjct: 13 SVDPATAIATLCSKGNLREAFQ--------RFRLNIFTNTSLFTPFIQSCTTRQSLPSGK 64
Query: 177 QIHGKIVVGNLGGNVFVRNALTDMYAK-------------------------------GG 205
Q+H +VV + F+ N L MY+K G
Sbjct: 65 QLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAG 124
Query: 206 EIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILG 265
++ AR +FD M +R L +WN MI+G ++ ++ + LF+EM LG +PDE T+ ++
Sbjct: 125 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 184
Query: 266 AC-----------------------------------FQTGRIDDAGRLFHVIKEKDNVC 290
+ G++ D + + ++ V
Sbjct: 185 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 244
Query: 291 WTTMIVGYTQNGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAV 350
W T+I+G QNG E L L+ M RP+K + +V+SSC+ LA GQ +H +A+
Sbjct: 245 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 304
Query: 351 VLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALA 410
+G + V S+LI MY KCG DA F+ + V W+SMI+ Y +GQ EA+
Sbjct: 305 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 364
Query: 411 LYDKLL-QENLKPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDHYACMINL 469
L++ + Q N++ + F+++L AC H+ L ++G FD + +G P L HY C+++L
Sbjct: 365 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 424
Query: 470 LGRSSDVDKAVDLIKSLPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPY 529
LGR+ +D+A +I+S+P K + +IW TLLS C + + + + + + +++P ++ Y
Sbjct: 425 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 484
Query: 530 IMLSNMYAACGRWEDVASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIY 589
++L+N++A+ RW DV+ +R SM+ KNVKK A SW E +VH+F DR+ +++ IY
Sbjct: 485 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIY 544
Query: 590 EELSKLIKKLQEAGFSPNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRI 649
L +L +++ G+ P+T VLHD EEEK + HSEKLA+A+ L+ P G PIRI
Sbjct: 545 SYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG-APIRI 603
Query: 650 MKNIRVCGDCHLFMKFASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
+KN+RVC DCH+ K+ S I R I LRD +RFHHF+ G CSC D W
Sbjct: 604 IKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 213/451 (47%), Gaps = 44/451 (9%)
Query: 26 YTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRLLHFYAKSGKLFYARDLFDKM 85
+T + CT + K+L + ++ + + F+ N L+ Y+K G A ++ +M
Sbjct: 47 FTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDK-FICNHLMSMYSKLGDFPSAVAVYGRM 105
Query: 86 PLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYNTAIAGFANKGFSREALQVFS 145
++ +S N L++ + R+G + + R +FD+MP R ++N IAG F+ E L +F
Sbjct: 106 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 165
Query: 146 RMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGG 205
M F P +YT S + A L + G+QIHG + L ++ V ++L MY + G
Sbjct: 166 EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG 225
Query: 206 EIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILG 265
++ + M RNLV+WN +I G +NG P+ + L++ M++ G P+++T +L
Sbjct: 226 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 285
Query: 266 AC-----------------------------------FQTGRIDDAGRLFHVIKEKDNVC 290
+C + G + DA + F +++D V
Sbjct: 286 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 345
Query: 291 WTTMIVGYTQNGKEEDALILFNEMLSE-DVRPDKFSISSVVSSCAKLASLYHGQVVHGKA 349
W++MI Y +G+ ++A+ LFN M + ++ ++ + +++ +C+ G +
Sbjct: 346 WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM 405
Query: 350 V-VLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNMMPTR-NVVSWNSMINGYAQNGQDLE 407
V G L + ++D+ + G D A + MP + ++V W ++++ +
Sbjct: 406 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEM 465
Query: 408 ALALYDKLLQENLKP-DSFTFVSVLSACLHA 437
A ++ ++LQ + P DS + VL A +HA
Sbjct: 466 AQRVFKEILQ--IDPNDSACY--VLLANVHA 492
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 315/571 (55%), Gaps = 38/571 (6%)
Query: 163 LNACAQLLDLRRGKQIHGKIVVGNLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNL 222
LNAC LR G+++H ++ ++R L Y K ++ AR + D M +N+
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 223 VSWNLMISGYLKNGQPKKCIDLFQEMQLLGLNPDEVTVSNILGACF-------------- 268
VSW MIS Y + G + + +F EM P+E T + +L +C
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 269 ---------------------QTGRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDA 307
+ G+I +A +F + E+D V T +I GY Q G +E+A
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 308 LILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLVSSALIDM 367
L +F+ + SE + P+ + +S++++ + LA L HG+ H + + ++ ++LIDM
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 298
Query: 368 YCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQEN-LKPDSFT 426
Y KCG A +F+ MP R +SWN+M+ GY+++G E L L+ + E +KPD+ T
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 427 FVSVLSACLHADLFERGQNHFDS-ISAVHGITPSLDHYACMINLLGRSSDVDKAVDLIKS 485
++VLS C H + + G N FD ++ +G P +HY C++++LGR+ +D+A + IK
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418
Query: 486 LPHKPNSLIWSTLLSVCAMKGDIKHGEMAARHLFELEPINAGPYIMLSNMYAACGRWEDV 545
+P KP + + +LL C + + GE R L E+EP NAG Y++LSN+YA+ GRW DV
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 478
Query: 546 ASIRSSMKSKNVKKFAAYSWIEIDNKVHKFVSEDRTHPETEIIYEELSKLIKKLQEAGFS 605
++R+ M K V K SWI+ + +H F + DRTHP E + ++ ++ K+++AG+
Sbjct: 479 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 538
Query: 606 PNTKLVLHDTQEEEKVKSICYHSEKLALAYCLIKKPHGVTPIRIMKNIRVCGDCHLFMKF 665
P+ VL+D EE+K K + HSEKLAL + LI G+ PIR+ KN+R+C DCH F K
Sbjct: 539 PDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGI-PIRVFKNLRICVDCHNFAKI 597
Query: 666 ASDIIGRTIILRDSNRFHHFVGGNCSCKDNW 696
S + R + LRD NRFH V G CSC D W
Sbjct: 598 FSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 192/424 (45%), Gaps = 78/424 (18%)
Query: 6 KLRQAIDTLYSRGQAATEEAYTQLVLDCTRVNDVELAKRLQSHMDLNFYEPNTTFLHNRL 65
+L++A+ + G Y L+ C + +R+ +HM Y P T+L RL
Sbjct: 35 RLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLP-ATYLRTRL 93
Query: 66 LHFYAKSGKLFYARDLFDKMPLRDIISWNALLSAHARSGSVQDLRALFDKMPIRDSVSYN 125
L FY K L +D R + D+MP ++ VS+
Sbjct: 94 LIFYGKCDCL-------------------------------EDARKVLDEMPEKNVVSWT 122
Query: 126 TAIAGFANKGFSREALQVFSRMQKDRFEPTDYTHVSALNACAQLLDLRRGKQIHGKIVVG 185
I+ ++ G S EAL VF+ M + +P ++T + L +C + L GKQIHG IV
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 186 NLGGNVFVRNALTDMYAKGGEIDKARWLFDRMNNRNLVSWNLMISGYLKNGQPKKCIDLF 245
N ++FV ++L DMYAK G+I +AR +F+ + R++VS +I+GY + G ++ +++F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 246 QEMQLLGLNPDEVTVSNILGA--------------CF---------------------QT 270
+ G++P+ VT +++L A C +
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 271 GRIDDAGRLFHVIKEKDNVCWTTMIVGYTQNGKEEDALILFNEMLSED-VRPDKFSISSV 329
G + A RLF + E+ + W M+VGY+++G + L LF M E V+PD ++ +V
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 330 VSSCA------KLASLYHGQVVHGKAVVLGVDDDLLVSSALIDMYCKCGVTDDAWTVFNM 383
+S C+ +++ G V G + ++DM + G D+A+
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH----YGCIVDMLGRAGRIDEAFEFIKR 418
Query: 384 MPTR 387
MP++
Sbjct: 419 MPSK 422
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 133/306 (43%), Gaps = 56/306 (18%)
Query: 301 NGKEEDALILFNEMLSEDVRPDKFSISSVVSSCAKLASLYHGQVVHGKAVVLGVDDDLLV 360
NG+ ++AL+ EM +++++C +L GQ VH + +
Sbjct: 33 NGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89
Query: 361 SSALIDMYCKCGVTDDAWTVFNMMPTRNVVSWNSMINGYAQNGQDLEALALYDKLLQENL 420
+ L+ Y KC +DA V + MP +NVVSW +MI+ Y+Q G EAL ++ ++++ +
Sbjct: 90 RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149
Query: 421 KPDSFTFVSVLSACLHADLFERGQNHFDSISAVHGITPSLDH------YACMINLLGRSS 474
KP+ FTF +VL++C+ A G+ +HG+ ++ + ++++ ++
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQ-------IHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 475 DVDKAVDLIKSLPHK----------------------------------PNSLIWSTLLS 500
+ +A ++ + LP + PN + +++LL+
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLT 262
Query: 501 VCAMKGDIKHGEMAARHLFELE-PINAGPYIMLSNMYAACGRWEDVASIRSSMKSKNVKK 559
+ + HG+ A H+ E P A L +MY+ CG + +M +
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERT--- 319
Query: 560 FAAYSW 565
A SW
Sbjct: 320 --AISW 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,228,277
Number of Sequences: 539616
Number of extensions: 10840199
Number of successful extensions: 36225
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 25936
Number of HSP's gapped (non-prelim): 2783
length of query: 696
length of database: 191,569,459
effective HSP length: 125
effective length of query: 571
effective length of database: 124,117,459
effective search space: 70871069089
effective search space used: 70871069089
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)