BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005459
(696 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69ZJ7|RIC1_MOUSE Protein RIC1 homolog OS=Mus musculus GN=Kiaa1432 PE=2 SV=2
Length = 1422
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 187/791 (23%), Positives = 319/791 (40%), Gaps = 142/791 (17%)
Query: 1 MYMAYGWPQVIPLEQGLC-PSSQQIIYFKVNN----GLLLIASPCHIELWSSSQHKVRLG 55
MY GWP+ + LC P S V + + +P + +W S + V +
Sbjct: 1 MYFLSGWPKRL-----LCAPRSPAEAPLHVQSDPRRAFFAVLAPARLSIWYS-RPSVLIV 54
Query: 56 KYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQ-------ITEKSIQIGGK 108
YK ++S + G QA W PD+ +IAV T++ Y+ F + + E G
Sbjct: 55 TYKEPAKSSTQFGSYKQAEWRPDSTMIAVSTANGYILFFHITSSRGDKYLYEPVYPKGSP 114
Query: 109 QPSGLFFIK-------ISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKG 161
Q G+ K ++L + + L +S+ +++ D +L+ SDG L+ I W+G
Sbjct: 115 QMKGIPHFKEEHCAPALNLEMKKILDLQAPIMSLQSVLED---LLVATSDGLLHLIHWEG 171
Query: 162 EFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMR 221
G + S+ SV S G+F+ I +E C +
Sbjct: 172 MTNGRKAINLSTVPFSVDLQSSRV-----------GSFLGFADVHIKD----MEYCATLD 216
Query: 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVE 281
V++++G++ + + + + D C ++ + +++A G G V+
Sbjct: 217 GFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQ-DVIDGTCVAVNNKYRLMAFGCASGCVQ 275
Query: 282 LYDLAESAS---LIRTVSLYDWGYS--MDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSV 336
+Y + + L + L Y + TG V I W+PDNSA V W+ GL++WSV
Sbjct: 276 VYTIDNTTGAMLLSHKLELTAKQYPDIWNKTGAVKLIRWSPDNSAVIVTWEYGGLSLWSV 335
Query: 337 SGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSER- 395
G +L+ T+ + K +PL + M W GY L+ I S+
Sbjct: 336 FGAQLICTL--------GGDFAYRSDGTKKDPLKINS--MSWGAEGYHLWVISGLGSQHT 385
Query: 396 --------------VLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTD------ 435
+L+F F K L + ++ GEDRL + E +
Sbjct: 386 QIETDLRSTVKEPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQAQNPKY 445
Query: 436 -----ELKILHLNLPV--------------------------SYISQNWPVQHVAASKDG 464
E H P +Y+ NWP++ A K G
Sbjct: 446 SSARAERMPRHEKSPFADGGLEAPGLSTLLGHRHWHVVQISSTYLESNWPIRFSAIDKLG 505
Query: 465 MFLAVAGLHGLILYDIRQKKWRVFGDITQEQK-IQSKGLLWLGKIIVVCNYIDSSNTYEL 523
+AVAG G Y + KKW++FG+ITQEQ I + GL W +V+ Y S EL
Sbjct: 506 QNIAVAGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWDDFMVLACYNLSDCQEEL 565
Query: 524 LFYPRY-HLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVKLFGELTPSTTP 582
Y R +LD + K+ + + +++ V+ D ++V + ++ ++ + + +TT
Sbjct: 566 RIYLRTSNLDNAFAHVTKAPM-ETLLLSVFRDMVVVFRADCSICLYSIERKSDGS-NTTA 623
Query: 583 DLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLNNHVSTSSDMLAREPARCLILRANG 642
+Q+ ++E+S+ HP + S N +S AR+ A ++L G
Sbjct: 624 SVQV--LQEVSMSRYIPHPF---LVVSVTLTSVSTENGISLKMPQQARD-AESIMLNLAG 677
Query: 643 ELSLLDLDDG----RERE----------------LTDSVELFWVTCGQLEEKTSLIEEVS 682
+L ++ D RE++ L SVE W TC ++K L+E +
Sbjct: 678 QLIMMQRDRSGPQIREKDSHPNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEAL- 736
Query: 683 WLDYGYRGMQV 693
WL G GM+V
Sbjct: 737 WLSCGGAGMKV 747
>sp|Q4ADV7|RIC1_HUMAN Protein RIC1 homolog OS=Homo sapiens GN=KIAA1432 PE=1 SV=2
Length = 1423
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 184/792 (23%), Positives = 317/792 (40%), Gaps = 143/792 (18%)
Query: 1 MYMAYGWPQVIPLEQGLCP-SSQQIIYFKVNN----GLLLIASPCHIELWSSSQHKVRLG 55
MY GWP+ + LCP S F V + + + + +W S + V +
Sbjct: 1 MYFLSGWPKRL-----LCPLGSPAEAPFHVQSDPQRAFFAVLAAARLSIWYS-RPSVLIV 54
Query: 56 KYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQIT-------EKSIQIGGK 108
YK ++S + G QA W PD+ +IAV T++ Y+ F + T E G
Sbjct: 55 TYKEPAKSSTQFGSYKQAEWRPDSTMIAVSTANGYILFFHITSTRGDKYLYEPVYPKGSP 114
Query: 109 QPSGLFFIK-------ISLVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKG 161
Q G K ++L + + L +S+ +++ D +L+ SDG L+ I W+G
Sbjct: 115 QMKGTPHFKEEQCAPALNLEMRKILDLQAPIMSLQSVLED---LLVATSDGLLHLIHWEG 171
Query: 162 EFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMR 221
G + + SV S + V + F H I +E C +
Sbjct: 172 MTNGRKAINLCTVPFSVDLQS--------SRVGSFLGFTDVH-------IRDMEYCATLD 216
Query: 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVE 281
V++++G++ + + + + D C ++ + +++A G G V+
Sbjct: 217 GFAVVFNDGKVGFITPVSSRFTAEQLHGVWPQ-DVVDGTCVAVNNKYRLMAFGCVSGSVQ 275
Query: 282 LYDLAESAS---LIRTVSLYDWGYS--MDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSV 336
+Y + S L + L Y + TG V + W+PDNS V W+ GL++WSV
Sbjct: 276 VYTIDNSTGAMLLSHKLELTAKQYPDIWNKTGAVKLMRWSPDNSVVIVTWEYGGLSLWSV 335
Query: 337 SGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSER- 395
G +L+ T+ + K +PL + M W GY L+ I S+
Sbjct: 336 FGAQLICTL--------GGDFAYRSDGTKKDPLKINS--MSWGAEGYHLWVISGFGSQNT 385
Query: 396 --------------VLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLV-------VQSEDT 434
+L+F F K L + ++ GEDRL + Q+ +
Sbjct: 386 EIESDLRSVVKQPSILLFQFIKSVLTVNPCMSNQEQVLLQGEDRLYLNCGEASQTQNPRS 445
Query: 435 DELKILH------------------------------LNLPVSYISQNWPVQHVAASKDG 464
H + + +Y+ NWP++ A K G
Sbjct: 446 SSTHSEHKPSREKSPFADGGLESQGLSTLLGHRHWHVVQISSTYLESNWPIRFSAIDKLG 505
Query: 465 MFLAVAGLHGLILYDIRQKKWRVFGDITQEQK-IQSKGLLWLGKIIVVCNYIDSSNTYEL 523
+AV G G Y + KKW++FG+ITQEQ I + GL W +V+ Y + EL
Sbjct: 506 QNIAVVGKFGFAHYSLLTKKWKLFGNITQEQNMIVTGGLAWWNDFMVLACYNINDRQEEL 565
Query: 524 LFYPRY-HLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVKLFGELTPSTTP 582
Y R +LD + K+ A+ +++ V++D ++V + ++ ++ + P+TT
Sbjct: 566 RVYLRTSNLDNAFAHVTKA-QAETLLLSVFQDMVIVFRADCSICLYSIERKSD-GPNTTA 623
Query: 583 DLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLNNHVSTSSDMLAREPARCLILRANG 642
+Q+ ++E+S+ HP + S N ++ AR A ++L G
Sbjct: 624 GIQV--LQEVSMSRYIPHPF---LVVSVTLTSVSTENGITLKMPQQARG-AESIMLNLAG 677
Query: 643 ELSLLDLDDG----RERE-----------------LTDSVELFWVTCGQLEEKTSLIEEV 681
+L ++ D RE++ L SVE W TC ++K L+E +
Sbjct: 678 QLIMMQRDRSGPQIREKDSNPNNQRKLLPFCPPVVLAQSVENVWTTCRANKQKRHLLEAL 737
Query: 682 SWLDYGYRGMQV 693
WL G GM+V
Sbjct: 738 -WLSCGGAGMKV 748
>sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila melanogaster GN=CG9063 PE=1 SV=1
Length = 1429
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 177/786 (22%), Positives = 310/786 (39%), Gaps = 151/786 (19%)
Query: 1 MYMAYGWPQVIPLE--------QGLCPSSQQIIYFKVNNGLLLI--ASPCHIELWSSSQH 50
MY GWP+ + L + +C + +I+ V + L I A+P
Sbjct: 1 MYYPVGWPKRVGLALPGESASIRHICCDAVKILVAAVGDDFLGIWYANPL---------- 50
Query: 51 KVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQI----- 105
+ + ++R +S+++ G N VW PD++ +A++T+S L ++++ + I
Sbjct: 51 -IPIAYFRRTEDSLRQYGANQLIVWKPDSRQLALLTASGSLLLYQLDFEANGMGILQQID 109
Query: 106 ----GGKQPSGLFFIKIS---LVLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSIS 158
K+ S FIK + L L E + + +LL L +
Sbjct: 110 PPAASLKRDSAELFIKENIPRLSLRELCSVTLGSVITTVCCISLSELLLATQSCELLRLQ 169
Query: 159 WKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPIS--SAIIWLEL 216
W EL H+ ND + ALS + V + + P++ S + LE
Sbjct: 170 WT-------ELEHAENDLELPALSSIKLRDIPFYVQQQPQQSARNVPPLNRDSYVASLE- 221
Query: 217 CLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSG-------DAVCASIAPEQQ 269
+ + G S + +A ++ + + G DA S+ + +
Sbjct: 222 -------YSPFIGGCAAVFSDRRAAFLIANHLRFETDHMHGFWVPDVEDASVCSVNHKFR 274
Query: 270 ILAVGTRRGVVELYDLAE-------SASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAF 322
+LA G V++Y + + S LI T ++ D G V+ + W+PD
Sbjct: 275 LLAYGQESSAVKVYAIDDATGGLEFSHRLILTENILP-----DSLGSVNELKWSPDGCVL 329
Query: 323 AVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQD--CKYEPLMSGTSMMQWDE 380
AV W + GL++WS G LMST+ S N D C+ PL ++W
Sbjct: 330 AVSWTNGGLSLWSTFGALLMSTL---------SWDFGLNVDLVCQ-NPLK--IRRLEWST 377
Query: 381 YGYRLYAIE---EGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQ------- 430
GY+L+ ++ E VL F K L+ T ++ G+D L + Q
Sbjct: 378 EGYQLFMLKLHPEKDKSNVLQLQFVKSALSMNPCMTTSPHILLQGDDCLYLNQGNNLELT 437
Query: 431 -------------------SEDTDELKILH----------------LNLPVSYISQNWPV 455
S D D L++ L LP++Y + NWP+
Sbjct: 438 YAGSHGTFPSSGLGSDEDISGDGDCLELKQSPHTGSILTESKYWTVLQLPLNYAATNWPI 497
Query: 456 QHVAASKDGMFLAVAGLHGLILYDIRQKKWRVFGDITQEQK-IQSKGLLWLGKIIVVCNY 514
++ A DG+ LAVAG GL Y + ++W++FG+ +QE+ + S GLLW +V+ Y
Sbjct: 498 RYAAIDPDGLHLAVAGRTGLAHYSLVTRRWKLFGNESQEKDFVVSGGLLWWHGFVVMGCY 557
Query: 515 IDSSNTYELLFYPRYHLDQSSLLCRKSLLAKPIVMDVYEDYILVTYRPFDVHIFHVKLFG 574
T EL YP + + + A I ++ + ++V V +F+
Sbjct: 558 SLLDRTDELRCYPADCKLDNQYGHKLQVRAPVISLNSFRHQLIVLTADGIVSLFN----- 612
Query: 575 ELTPSTTPDLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLNNHVSTSSDMLAREPAR 634
++ ++ L + EL + + HPA + + +L N + L + A
Sbjct: 613 -MSKNSAYALDIECAYELDVKSICIHPACIVSL-----TVTNLKNELKPQG-QLGGDQAE 665
Query: 635 CLILRANGELSLLDLDDGRERE-------LTDSVELFWVTCGQLEEKTSLIEEVSWLDYG 687
+I+ G + ++ D G + L VE+FW++ LE + + WL G
Sbjct: 666 TIIVNVCGRILMIQRDAGEQVPNTLLATCLASCVEVFWLS-HSLER--CAMRDCLWLYSG 722
Query: 688 YRGMQV 693
GM+V
Sbjct: 723 AHGMRV 728
>sp|O42656|RIC1_SCHPO Protein ric1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ric1 PE=1 SV=2
Length = 1052
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 35/262 (13%)
Query: 445 PVSYISQNWPVQHVAASKDGMFLAVAGLHGLILYDIRQKKWRVFGDITQEQKIQ-SKGLL 503
P Y++ WP+++V+ DG +A+AGLHGL +Y +K W ++ D EQ I + ++
Sbjct: 489 PQPYVASEWPIRYVSIKDDGSLIAIAGLHGLAIYVCSKKTWFLYKDANMEQLISVTCPMI 548
Query: 504 WLGKII---VVCNYIDSSNTYEL-LFYPRYHLDQSSLLCRKSLLAKPIVMDVYEDYILVT 559
W + + VVC + +EL L+ + LD L + S + + M V ++Y LV
Sbjct: 549 WCSQFLLAGVVC-----ESNFELHLYKAKGPLDDRENLAKLSFTSTIVTMSVCDEYSLVV 603
Query: 560 YRPFDVHIFHVKL-FGELTPSTTPDLQLSTVRELSIMTAKSHPAAMRFIPDQVPRECSLN 618
Y D + H++ EL L+L + ++ + P+ +R I +P++ L
Sbjct: 604 YTA-DNFLHHIRFDINELGR-----LELDYLTSVNFAPIFTTPSRVRSITLLLPKD--LA 655
Query: 619 NHVSTSSDMLAREPARCLILRANGELSLLDLDDGRERE-------LTDSVELFWVTCGQL 671
N SD+L L++ NG+L LL L +E L VE +++ Q
Sbjct: 656 N--IQPSDLLFYA---VLLVLINGKLVLLSLKKQHSKELLYQCSMLAGDVEFYFINGSQ- 709
Query: 672 EEKTSLIEEVSWLDYGYRGMQV 693
E SL + W+ G +G+++
Sbjct: 710 -EIPSLFHSI-WIMTG-KGLKL 728
>sp|Q09417|RIC1_CAEEL Protein RIC1 homolog OS=Caenorhabditis elegans GN=R06F6.8 PE=3 SV=2
Length = 1470
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 106/560 (18%), Positives = 218/560 (38%), Gaps = 68/560 (12%)
Query: 1 MYMAYGWPQVIPL---EQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKY 57
M++ P V+ L E+ + + I + L+ +A+ I +W ++ +
Sbjct: 1 MFIPNDRPSVLQLPKHEKDSTAADIKSIVANRDRRLIAVATNDAIYIWLANPQLLLCSVG 60
Query: 58 KRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIK 117
D+ + GE + W PD+ IAV T+ + I+ + + + + +F +
Sbjct: 61 VIDANFKETRGELKEIYWKPDSTSIAVTTNQCKILIYNLDLRDDEQCYNFTDSADPYFQR 120
Query: 118 IS--LVLNEQLPFAEKGLSV--------SNIVSDNKHMLLGLSDGSLYSISWKGEFYGAF 167
S L + P A ++ + V L+ L +G + ++W GE +
Sbjct: 121 NSPELFIKGSRPTAHLHPTIIINLADIPTCCVPSRDEFLVCLQNGFTHHVTWTGEIIASL 180
Query: 168 ELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLF-VL 226
SS SV L S + S S I+ + P+ F ++
Sbjct: 181 SFRASSIPFSVDQLQSK--SENITS---------------KSTYIFDAVYAPLLGGFAIV 223
Query: 227 YSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLA 286
S+GQ + + + + DA C + + ++ G + G V Y++
Sbjct: 224 LSDGQGALLTSNDPNFAPNAILGVWAP-NMKDATCCDVNHKFLLILFGCKNGDVCAYNID 282
Query: 287 E-SASLIRTVSLYDWGYSMDDT----GPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGC-- 339
E + SL+++ + + D GPV I + F W +SG
Sbjct: 283 ELNGSLVQSFRVAPKVTNGPDLTNRLGPVHRITALANGYGFGAIWSP-------LSGAHA 335
Query: 340 --RLMSTIRQISLSSISS--PIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSER 395
RL++ S + +V+ +Q+ +Y + ++W G++L+ G+
Sbjct: 336 LPRLVAVFTSFGAQSFCNLEGVVEEDQNDRY-------TAIEWGPEGFQLWL---GTENE 385
Query: 396 VLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKIL------HLNLPVSYI 449
+++ F + + R V+ + ++L+ + D + H+ + Y+
Sbjct: 386 LMMQPFVRSASCSSPAMEHCDRAVLMSDSQVLISAARDREAEACAPHSVWDHITVTHEYL 445
Query: 450 SQNWPVQHVAASKDGMFLAVAGLHGLILYDIRQKKWRVFGDITQEQKIQSKG--LLWLGK 507
S NWP+++ + ++ L VAG G+ + ++W++FG+ TQE+ + G +W
Sbjct: 446 SSNWPLRYASTDRNYKHLVVAGDQGMAYCSLSNRRWKIFGNETQEKNLLVTGGVFIWNDD 505
Query: 508 IIVVCNYIDSSNTYELLFYP 527
+I V ++ L FYP
Sbjct: 506 VIGVVGVAADTDKSHLSFYP 525
>sp|Q8BHB4|WDR3_MOUSE WD repeat-containing protein 3 OS=Mus musculus GN=Wdr3 PE=2 SV=1
Length = 942
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 259 AVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPD 318
A+C+ P + + +GT+ G ++LYDLA S +L+ T++ +D G + ++ +PD
Sbjct: 456 ALCSFFVPGDRQVVIGTKTGNLQLYDLA-SGTLLETIAAHD--------GALWSMSLSPD 506
Query: 319 NSAFAVGWKSRGLTVW 334
F G + + W
Sbjct: 507 QRGFVTGGADKAVKFW 522
>sp|Q9UNX4|WDR3_HUMAN WD repeat-containing protein 3 OS=Homo sapiens GN=WDR3 PE=1 SV=1
Length = 943
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 259 AVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPD 318
A+C+ P + + +GT+ G ++LYDLA S +L+ T+ +D G + ++ +PD
Sbjct: 457 ALCSFFVPGDRQVVIGTKTGKLQLYDLA-SGNLLETIDAHD--------GALWSMSLSPD 507
Query: 319 NSAFAVGWKSRGLTVW 334
F G + + W
Sbjct: 508 QRGFVTGGADKSVKFW 523
>sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=1 SV=1
Length = 567
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 254 LGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCI 313
+G G + +P+ + LA ++ G + +++ +SA L T+ Y G + C+
Sbjct: 216 VGEGALNEFAFSPDGKFLACVSQDGFLRVFNF-DSAELHGTMKSY--------FGGLLCL 266
Query: 314 AWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR 346
W+PD G + +TVWS CR+++ R
Sbjct: 267 CWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGR 299
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 46/229 (20%)
Query: 256 SGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLY-DWGYSMDDTGPVSCIA 314
S + +P+ Q +A G+ V+L+ + L++T++ + DW V+ ++
Sbjct: 1197 SAGVITVRFSPDGQTIAAGSEDKTVKLWH-RQDGKLLKTLNGHQDW---------VNSLS 1246
Query: 315 WTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR-------QISLSSISSPIVKPNQDCKYE 367
++PD A + + +W ++ +L+ T++ ++ SS I ++D
Sbjct: 1247 FSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRD---- 1302
Query: 368 PLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLL 427
++ W+ +G L G SG YA + + +
Sbjct: 1303 -----NTIKLWNRHGIELETFT-------------------GHSGGVYAVNFLPDSNIIA 1338
Query: 428 VVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLI 476
++T L L P+ ++ N V V+ DG +A AG G I
Sbjct: 1339 SASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNI 1387
>sp|Q10437|BUN62_SCHPO UBP9-binding protein bun62 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=bun62 PE=1 SV=1
Length = 543
Score = 37.0 bits (84), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 264 IAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFA 323
+P+ Q LA+ + RG ++L+D + L S + ++C+ W+PD A
Sbjct: 330 FSPDYQYLALVSERGTLKLFDFVKEHVLDVFHSYF---------AGLTCVTWSPDGKFIA 380
Query: 324 VGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCK-YEPLMSGTSMMQW--DE 380
+G K ++++S P+ K C+ ++ ++ W D+
Sbjct: 381 IGGKDDLVSIYSF-------------------PLRKLVARCQGHKSWVTDVIFDAWRCDD 421
Query: 381 YGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQ 418
YR+ ++ G ++L++ F ++R S + Y
Sbjct: 422 DNYRIASV--GLDRKLLLWDFSVSAIHRPKSAVYYVNH 457
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 36.6 bits (83), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 80/207 (38%), Gaps = 36/207 (17%)
Query: 266 PEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVG 325
P+ +LA G+ V L+D++ S L +W V+ +A+ PD S A G
Sbjct: 1252 PDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNW---------VNSVAFNPDGSMLASG 1302
Query: 326 WKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRL 385
+ + +W +S + + T Q S +SS P+ L SG+ D+ RL
Sbjct: 1303 SGDQTVRLWEISSSKCLHTF-QGHTSWVSSVTFSPDGTM----LASGS-----DDQTVRL 1352
Query: 386 YAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLN-- 443
++I G CL + + VI+ D ++ +++ ++
Sbjct: 1353 WSISSGE------------CLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSG 1400
Query: 444 --LPVSYISQNWPVQHVAASKDGMFLA 468
L NW V + S DG LA
Sbjct: 1401 KCLYTLQGHNNW-VGSIVFSPDGTLLA 1426
>sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2
Length = 3036
Score = 36.6 bits (83), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 259 AVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPD 318
A AP+QQ+L G R+G V ++D+ + LI T +D + +A P
Sbjct: 2903 ATVLQYAPKQQLLISGGRKGHVCIFDIRQR-QLIHTFQAHD--------SAIKALALDPY 2953
Query: 319 NSAFAVGWKSRGLTVWSVSGCRLMSTIR 346
F G + VW ++G L+ + +
Sbjct: 2954 EEYFTTGSAEGNIKVWRLTGHGLIHSFK 2981
>sp|Q8TBZ3|WDR20_HUMAN WD repeat-containing protein 20 OS=Homo sapiens GN=WDR20 PE=1 SV=2
Length = 569
Score = 36.6 bits (83), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 254 LGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCI 313
+G G + +P+ + LA ++ G + +++ +S L T+ Y G + C+
Sbjct: 218 VGEGALNEFAFSPDGKFLACVSQDGFLRVFNF-DSVELHGTMKSY--------FGGLLCV 268
Query: 314 AWTPDNSAFAVGWKSRGLTVWSVSGCRLMS 343
W+PD G + +TVWS CR+++
Sbjct: 269 CWSPDGKYIVTGGEDDLVTVWSFVDCRVIA 298
>sp|Q9FLX9|NLE1_ARATH Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1
Length = 473
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Query: 255 GSGDAV-CASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCI 313
G +AV C S +P+ + LA G+ V L+DL L +W V +
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNW---------VLTV 157
Query: 314 AWTPDNSAFAVGWKSRGLTVWS 335
AW+PD G KS + W+
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWN 179
>sp|Q5RFF8|NLE1_PONAB Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3
Length = 485
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 20/161 (12%)
Query: 260 VCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDN 319
+ + +P + LA G+ V +DL+ W V I+W+PD
Sbjct: 118 ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHW---------VLSISWSPDG 168
Query: 320 SAFAVGWKSRGLTVWSVS-GCRLMSTIRQIS--LSSISSPIVKPNQDCKYEPLMSGTSMM 376
A G K+ + +W S G ++ T+ S ++ +S + N +C+Y S +
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSV 228
Query: 377 Q-WDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYA 416
+ WD R I G ++ V CL G G+ Y+
Sbjct: 229 RIWDTTAGRCERILTGHTQSV-------TCLRWGGDGLLYS 262
>sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1
SV=1
Length = 1335
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 264 IAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFA 323
I P+ ++A G+ +Y+ S LI + YD G+ G +SC+A+ P A
Sbjct: 1261 IHPQADLIACGSVNQFTAIYN--SSGELINNIKYYD-GFMGQRVGAISCLAFHPHWPHLA 1317
Query: 324 VGWKSRGLTVWSV 336
VG ++V+SV
Sbjct: 1318 VGSNDYYISVYSV 1330
>sp|Q09309|YQS1_CAEEL Uncharacterized WD repeat-containing protein F21H12.1
OS=Caenorhabditis elegans GN=F21H12.1 PE=4 SV=3
Length = 454
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 241 GLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDW 300
G + E ++ +L + A C I+AVG G V +YD + ++ RT S +
Sbjct: 10 GAQFPEELECHLDLQNASANCCKFNRWGSIVAVGCTDGRVLIYDFM-TRNIARTFSAH-- 66
Query: 301 GYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKP 360
PVSC++W+ D + ++ V L+ IR S+ ++ + P
Sbjct: 67 ------CLPVSCLSWSRDGRKLLTSSADNSIAMFDVLAGTLLHRIRFNSM--VTFAMFHP 118
Query: 361 NQDCK 365
D K
Sbjct: 119 RNDNK 123
>sp|Q9NVX2|NLE1_HUMAN Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=4
Length = 485
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 20/161 (12%)
Query: 260 VCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDN 319
+ + +P + LA G+ V +DL+ W V I+W+PD
Sbjct: 118 ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHW---------VLSISWSPDG 168
Query: 320 SAFAVGWKSRGLTVWSVS-GCRLMSTIRQIS--LSSISSPIVKPNQDCKYEPLMSGTSMM 376
A G K+ + +W S G ++ T+ S ++ +S + N +C+Y S +
Sbjct: 169 RKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSV 228
Query: 377 Q-WDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYA 416
+ WD R I G ++ V CL G G+ Y+
Sbjct: 229 RIWDTTAGRCERILTGHTQSV-------TCLRWGGDGLLYS 262
>sp|Q11176|WDR1_CAEEL Actin-interacting protein 1 OS=Caenorhabditis elegans GN=unc-78
PE=1 SV=1
Length = 611
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 147/387 (37%), Gaps = 112/387 (28%)
Query: 52 VRLGKYKRDS-ESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQI--TEKSIQIGGK 108
+ G ++ DS ++V G WSPD IA ++ + I+ V EK+I +G +
Sbjct: 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282
Query: 109 ---QPSGLFFIK---ISLVLNEQLPFAEKGL-SVSNIVSDNKHMLLGLS---DG-SLYSI 157
Q G+ + K +S+ N + F L S+ + + + LS DG +L+S
Sbjct: 283 IEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSA 342
Query: 158 SWKGEFYG----------AFELVHSSNDSSVAALSH----------HF---PSNGLASVD 194
+G F VH++ + + S H P+ G + VD
Sbjct: 343 DAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGG-SGVD 401
Query: 195 TSGAFVSD-HKFPISSAI-----IWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFI 248
+S A + P+ A+ I + C +YS+G+L +S
Sbjct: 402 SSKAVANKLSSQPLGLAVSADGDIAVAACYKH---IAIYSHGKLTEVPISY--------- 449
Query: 249 KIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESA----------SLIRTVSLY 298
++ C +++ ++Q +AVG + V +Y L+ ++ + I +V+
Sbjct: 450 ---------NSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFS 500
Query: 299 DWG--------------YSMDD-------------TGPVSCIAWTPDNSAFAVGWKSRGL 331
+ G YS+ + T V+C++W+PDN A G +
Sbjct: 501 NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 560
Query: 332 TVWS----------VSGCRLMSTIRQI 348
VW+ + G MS++ +
Sbjct: 561 IVWNMNKPSDHPIIIKGAHAMSSVNSV 587
>sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=4
Length = 485
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 20/161 (12%)
Query: 260 VCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDN 319
+ + +P + LA G+ V +DL+ W V I+W+PD
Sbjct: 118 ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHW---------VLSISWSPDG 168
Query: 320 SAFAVGWKSRGLTVWSVS-GCRLMSTIRQIS--LSSISSPIVKPNQDCKYEPLMSGT-SM 375
A G K+ + +W S G ++ T+ S ++ +S + N +C+Y S S+
Sbjct: 169 KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 228
Query: 376 MQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYA 416
WD R I G ++ V CL G G+ Y+
Sbjct: 229 RVWDTTAGRCERILTGHTQSV-------TCLRWGGDGLLYS 262
>sp|P33215|NEDD1_MOUSE Protein NEDD1 OS=Mus musculus GN=Nedd1 PE=2 SV=2
Length = 660
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 44/181 (24%)
Query: 199 FVSDHKFPIS-------SAIIWLELCLPMRLLFVLYSNGQLMSCSVSKKGLKLAEFIKID 251
F S HK P S + ++++ + L R++ S+ +L+ V+ L +F+
Sbjct: 201 FDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDFM--- 257
Query: 252 KELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVS 311
P+ LA+G+ RG + YDL S ++T+S + V
Sbjct: 258 --------------PDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTS--------VQ 295
Query: 312 CIAW-----------TPDNSAFAVGWKSRGLTVWSVSGCRLMSTI-RQISLSSISSPIVK 359
CIA+ + +S A R + V S SG S I R+ SI++ + +
Sbjct: 296 CIAFQYSTSLTKASLSKGSSNKATAVNKRSVPVSSSSGAAQNSGIVREAPSPSIATVLPQ 355
Query: 360 P 360
P
Sbjct: 356 P 356
>sp|Q6PNC0|DMXL1_MOUSE DmX-like protein 1 OS=Mus musculus GN=Dmxl1 PE=1 SV=1
Length = 3013
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 256 SGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAW 315
SG V A AP+ Q+L G R+G ++DL + S PV IA
Sbjct: 2873 SGATVLA-YAPKHQLLISGGRKGFTCIFDLRQRQQRQLFQS---------HDSPVKAIAI 2922
Query: 316 TPDNSAFAVGWKSRGLTVWSVSGCRLMSTI 345
P F G + +WS+S L+ T
Sbjct: 2923 DPTEEYFVTGSAEGNIKIWSLSSFSLLHTF 2952
>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
Length = 923
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 37/170 (21%)
Query: 261 CASIAPEQQILAVGTRRGVVELYDLAE---------SASLIRTVS--------------- 296
C + P ++LAVG G LYDL + + + TVS
Sbjct: 265 CVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKL 324
Query: 297 ----LYDW---GYSMDDTG---PVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIR 346
+Y+W Y + G + +A++PD S + + VW ++ ++T
Sbjct: 325 GQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFE 384
Query: 347 QISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERV 396
+ + S + K Q + + GT + WD YR + G +ER+
Sbjct: 385 EHTSSVTAVQFAKRGQ-VMFSSSLDGT-VRAWDLIRYRNFRTFTG-TERI 431
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 250 IDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGP 309
+++ GS VC +P+ LA G G + L++ +T LY G S+ D+
Sbjct: 92 LEQPGGSPVRVCC-FSPDSAYLASGAADGSIALWN-------AQTYKLYRCG-SVKDSSL 142
Query: 310 VSCIAWTPDNSAFAVGWKSRGLTVW 334
V+C A++PD F G LTVW
Sbjct: 143 VAC-AFSPDGGLFVTGSSGGDLTVW 166
>sp|Q8K4Q0|RPTOR_MOUSE Regulatory-associated protein of mTOR OS=Mus musculus GN=Rptor PE=1
SV=1
Length = 1335
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 264 IAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFA 323
I P+ ++A G+ +Y+ + LI + YD G+ G +SC+A+ P A
Sbjct: 1261 IHPQANLIACGSMNQFTAIYN--GNGELINNIKYYD-GFMGQRVGAISCLAFHPHWPHLA 1317
Query: 324 VGWKSRGLTVWSV 336
VG ++V+SV
Sbjct: 1318 VGSNDYYISVYSV 1330
>sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL1 PE=1 SV=3
Length = 3027
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 256 SGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAW 315
SG V A AP+ Q+L G R+G ++DL + + L+ S D PV +A
Sbjct: 2887 SGATVLA-YAPKHQLLISGGRKGFTYVFDLCQR----QQRQLFQ---SHD--SPVKAVAV 2936
Query: 316 TPDNSAFAVGWKSRGLTVWSVSGCRLMSTI 345
P F G + +WS+S L+ T
Sbjct: 2937 DPTEEYFVTGSAEGNIKIWSLSTFGLLHTF 2966
>sp|Q6NV31|WDR82_DANRE WD repeat-containing protein 82 OS=Danio rerio GN=wdr82 PE=2 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 223 LFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVEL 282
L ++ +NG + + KG L F + G + AS P+ Q + +G+ G + +
Sbjct: 208 LILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKGV--ILEASFTPDSQFIMIGSEDGKIHV 265
Query: 283 YDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFA 323
++ AES V+L D + TGPV+C+ + P FA
Sbjct: 266 WN-AESG---MKVALLDGKH----TGPVTCLQFNPKFMTFA 298
>sp|P49026|GBLP_TOBAC Guanine nucleotide-binding protein subunit beta-like protein
OS=Nicotiana tabacum GN=ARCA PE=2 SV=1
Length = 326
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 310 VSCIAWTPDN--SAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYE 367
VSC+ ++P+N G R + +W+++ C+L T+ + +++P V P+
Sbjct: 153 VSCVRFSPNNLQPTIVSGSWDRTVKIWNLTNCKLRLTLAGHT-GYVNTPAVSPDGSLCAS 211
Query: 368 PLMSGTSMMQWD-EYGYRLYAIEEGSSERVLIFS 400
G ++ WD G +LY++E GS L FS
Sbjct: 212 GGKDGV-ILLWDLAEGKKLYSLESGSIIHSLCFS 244
>sp|O93277|WDR1_CHICK WD repeat-containing protein 1 OS=Gallus gallus GN=WDR1 PE=2 SV=1
Length = 609
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 310 VSCIAWTPDNSAFAVGWKSRGLTVWSVS 337
V CIAW+PDN FA G + VW+VS
Sbjct: 537 VVCIAWSPDNEHFASGGMDMMVYVWTVS 564
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Query: 224 FVLYS-NGQLMSCSVSKKGLKL---AEFIKIDKELGSGDAV-CASIAPEQQILAVGTRRG 278
FV++S +G++++ + + +KL + + I G V + P+ + LA +
Sbjct: 689 FVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDK 748
Query: 279 VVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSG 338
++L+D+ + L DW V C+A++PD + A + +W VS
Sbjct: 749 TIKLWDIQDGTCLQTLTGHTDW---------VRCVAFSPDGNTLASSAADHTIKLWDVSQ 799
Query: 339 CRLMSTIR 346
+ + T++
Sbjct: 800 GKCLRTLK 807
>sp|P38262|SIF2_YEAST SIR4-interacting protein SIF2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SIF2 PE=1 SV=2
Length = 535
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 244 LAEFIKIDKELGSGDAVCASI-AP-EQQILAVGTRRGVVELYDLAES------------- 288
L F+KI KE+ D + +S P ++ ILA G + V L + E+
Sbjct: 144 LDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTII 203
Query: 289 ASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRL 341
A L +L S T V+C+AW+ D ++ G ++ L +W+ +G L
Sbjct: 204 AELRHPFALS--ASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALL 254
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 82/225 (36%), Gaps = 34/225 (15%)
Query: 150 SDGSLYSISWKGEFYGAFELVHSSNDSSVAALSHHFPSNGLASVDTSGAFVSDHKFPISS 209
SDGS+ +S G YG S ++ + + S S L SVDT A V+ + +
Sbjct: 369 SDGSVRLLSHSGPVYGT---TFSPDNKYLLSCSED-ASARLWSVDTKTALVA---YKGHT 421
Query: 210 AIIWLELCLPMRLLFVLYSN---GQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAP 266
+W P F S+ QL SC A + D C + P
Sbjct: 422 GPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHL--------SDVDCVTFHP 473
Query: 267 EQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGW 326
+ G+ L+D+ S +R + + T PV+ +A PD A
Sbjct: 474 NSAYVLTGSSDKTCRLWDVHRGHS-VRVFNGH--------TQPVTAVAIAPDGHTMASAD 524
Query: 327 KSRGLTVWSVSGCRLMSTIR-------QISLSSISSPIVKPNQDC 364
+ +W + R + T+R +S S S+ +V DC
Sbjct: 525 SEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDC 569
>sp|Q3BWZ0|RPOC_XANC5 DNA-directed RNA polymerase subunit beta' OS=Xanthomonas campestris
pv. vesicatoria (strain 85-10) GN=rpoC PE=3 SV=1
Length = 1404
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 36 IASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHI-F 94
I SP + E V LG Y ++GE + + + K A + LH
Sbjct: 490 ILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANTSEVKR-AYDNRVVELHAKV 548
Query: 95 KVQITEKSIQIGGKQPSGLFFIK-------ISLVLNEQLPF--AEKGLSVSNI--VSDNK 143
KV+IT+ ++ GGK+ SG + +S +L E LPF A ++ NI + ++
Sbjct: 549 KVRITQVDVEAGGKRSSGTSIVDTTVGRALLSEILPEGLPFQLANTEMTKKNISRLINSS 608
Query: 144 HMLLGLSDGSLYS 156
+ LLGL D +++
Sbjct: 609 YRLLGLKDTVVFA 621
>sp|Q8PNS9|RPOC_XANAC DNA-directed RNA polymerase subunit beta' OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=rpoC PE=3 SV=1
Length = 1404
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 36 IASPCHIELWSSSQHKVRLGKYKRDSESVQREGENLQAVWSPDTKLIAVVTSSLYLHI-F 94
I SP + E V LG Y ++GE + + + K A + LH
Sbjct: 490 ILSPANGEPIIVPSQDVVLGLYYMSRALENKKGEGMVFANTSEVKR-AYDNRVVELHAKV 548
Query: 95 KVQITEKSIQIGGKQPSGLFFIK-------ISLVLNEQLPF--AEKGLSVSNI--VSDNK 143
KV+IT+ ++ GGK+ SG + +S +L E LPF A ++ NI + ++
Sbjct: 549 KVRITQVDVEAGGKRSSGTSIVDTTVGRALLSEILPEGLPFQLANTEMTKKNISRLINSS 608
Query: 144 HMLLGLSDGSLYS 156
+ LLGL D +++
Sbjct: 609 YRLLGLKDTVVFA 621
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 114/285 (40%), Gaps = 37/285 (12%)
Query: 227 YSNGQLMSCSVSK--KGLKLAEFIKIDK---ELGSGDAVCASIAPEQQILAVGTRRGVVE 281
+S+ L +CS+ K + L++F ++ + + C S +P +LA + G
Sbjct: 20 FSSTLLATCSLDKTIRLYSLSDFAELPHSPLKFHTYAVHCCSFSPSGHVLASCSTDGTTV 79
Query: 282 LYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRL 341
L+ SA T+++ + PV ++PD++ A G + +W+ +L
Sbjct: 80 LW----SAHSGHTLTVLE----QPGGSPVRVCCFSPDSTYLASGAADGSVVLWNAHSYKL 131
Query: 342 --MSTIRQISLSSISSPIVKPNQDCKYEP----LMSGTS---MMQWDEYGYRLYAIEEGS 392
+++ SL + C + P L++G+S + WD+ L++ E+
Sbjct: 132 YRCGSVKDSSLVA-----------CAFSPDGGLLVTGSSGGDLTVWDDRMRCLHS-EKAH 179
Query: 393 SERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELKILHLNLPVSYISQN 452
+ SF L+ G G+ R G+D + + + L +
Sbjct: 180 DLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVVSFTRVLGFELKYRSTLSGHC 239
Query: 453 WPVQHVAASKDGMFLAVAGL-HGLILYDIRQKKWRVFGDITQEQK 496
PV A S DG LA + +I+YDI + V +TQ +
Sbjct: 240 APVLACAFSHDGQMLASGSVDKSVIIYDIGTQS--VLHTLTQHTR 282
>sp|Q10281|GBLP_SCHPO Guanine nucleotide-binding protein subunit beta-like protein
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rkp1 PE=1 SV=3
Length = 314
Score = 33.9 bits (76), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 256 SGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGP---VSC 312
+ D + SI+P+ + + G+R ++++++ + Y++ D G VSC
Sbjct: 105 TSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCK-----------YTITDGGHSDWVSC 153
Query: 313 IAWT--PDNSAF-AVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPL 369
+ ++ PDN F + GW + + VW + L T +S+ + P+
Sbjct: 154 VRFSPNPDNLTFVSAGWD-KAVKVWDLETFSLR-TSHYGHTGYVSAVTISPDGSLCASGG 211
Query: 370 MSGTSMMQWD-EYGYRLYAIEEGSSERVLIFS 400
GT +M WD LY++E ++ L+FS
Sbjct: 212 RDGT-LMLWDLNESTHLYSLEAKANINALVFS 242
>sp|O24456|GBLPA_ARATH Guanine nucleotide-binding protein subunit beta-like protein A
OS=Arabidopsis thaliana GN=RACK1A PE=1 SV=2
Length = 327
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 288 SASLIRTVSLYD----WGYSMDDTGP-----VSCIAWTPDN---SAFAVGWKSRGLTVWS 335
SAS RT+ L++ Y++ + G VSC+ ++P+ + + W + + VW+
Sbjct: 122 SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW-DKTVKVWN 180
Query: 336 VSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIEEGSSE 394
+S C+L ST+ + +S+ V P+ G ++ WD G +LY++E S
Sbjct: 181 LSNCKLRSTLAGHT-GYVSTVAVSPDGSLCASGGKDGVVLL-WDLAEGKKLYSLEANSVI 238
Query: 395 RVLIFS 400
L FS
Sbjct: 239 HALCFS 244
>sp|A1DMI8|CREC_NEOFI Probable catabolite repression protein creC OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=creC PE=3 SV=1
Length = 603
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 27/156 (17%)
Query: 263 SIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAF 322
+ +P+Q+ LAV G + + D + L S Y G + C+ W+PD
Sbjct: 344 AFSPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYY---------GGLICVCWSPDGKYI 394
Query: 323 AVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYG 382
G + LT+WS ++++ Q S +S+ P Q DE
Sbjct: 395 VTGGQDDLLTIWSFPERKIVARC-QGHNSWVSAVAFDP---------------WQCDERT 438
Query: 383 YRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQ 418
YR ++ G R+L++ F L+R ARQ
Sbjct: 439 YRFGSV--GDDCRLLLWDFSVGMLHRPKVHQASARQ 472
>sp|O24076|GBLP_MEDSA Guanine nucleotide-binding protein subunit beta-like protein
OS=Medicago sativa GN=GB1 PE=2 SV=1
Length = 325
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 288 SASLIRTVSLYD----WGYSMDDTGP----VSCIAW---TPDNSAFAVGWKSRGLTVWSV 336
SAS RT+ L++ Y++ D VSC+ + TP + + W R + VW++
Sbjct: 122 SASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTPQPTIVSASWD-RTVKVWNL 180
Query: 337 SGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD-EYGYRLYAIEEGSSER 395
+ C+L +T+ S +++ V P+ G ++ WD G RLY+++ GS
Sbjct: 181 TNCKLRNTLAGHS-GYVNTVAVSPDGSLCASGGKDGV-ILLWDLAEGKRLYSLDAGSIIH 238
Query: 396 VLIFS 400
L FS
Sbjct: 239 ALCFS 243
>sp|Q5BDU4|HIR1_EMENI Protein hir1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=hir1 PE=3 SV=2
Length = 1031
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 320 SAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWD 379
+ A + L+VW S R + ++++ SIS P+ C Y + GT +
Sbjct: 334 TVIACAGGDKSLSVWITSNPRPIVVAQELAAKSISDLAWSPDGSCLYATALDGTILAVRF 393
Query: 380 EYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVIYGEDRLLVVQSEDTDELK 438
E G YA+E +E+ L FG G++ T D LL+ + ELK
Sbjct: 394 EDGDLGYAMELEENEKSLT-KFGTNRKGAGIAETT---------DGLLLEEKSKAGELK 442
>sp|Q297N8|HPS5_DROPS Hermansky-Pudlak syndrome 5 protein homolog OS=Drosophila
pseudoobscura pseudoobscura GN=p PE=3 SV=1
Length = 830
Score = 33.1 bits (74), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 263 SIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAF 322
SI+ + +A T+R ++ +Y + SA V + +D + VSCI WT D F
Sbjct: 71 SISANNKYVAFSTQRSLICVYVVNLSAQATPQVIVT----HLDQSVQVSCIHWTQDEKQF 126
Query: 323 AVGWKSRG----LTVWSVSGCRLMSTIRQISLSSISSPIVK 359
G SRG + + S G L+ + L + SPIV+
Sbjct: 127 YYG-DSRGQVNLVLLSSFIGHSLLLNMTVHPLLYLDSPIVQ 166
>sp|Q4WN25|CREC_ASPFU Probable catabolite repression protein creC OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=creC PE=3 SV=2
Length = 566
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 39/215 (18%)
Query: 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRR---G 278
L ++NGQL+ V K + A F ++ + +S P Q + +V +R
Sbjct: 242 LFMASHANGQLV---VYDKEKEDALFTPEIQDQSAEAVKASSTQPLQVLKSVNSRNQKTN 298
Query: 279 VVELYDLAES--------------ASLIRTVSLYDWGYSMDDT-GPVSCIAWTPDNSAFA 323
V L+ LA A ++ SL Y +D G + C+ W+PD
Sbjct: 299 PVALWKLANQRISHFAFSPDQRHLAVVLEDGSLRVMDYLKEDYYGGLICVCWSPDGKYIV 358
Query: 324 VGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGY 383
G + +T+WS ++++ Q S +S+ P Q DE Y
Sbjct: 359 TGGQDDLVTIWSFPERKIVARC-QGHNSWVSAVAFDP---------------WQCDERTY 402
Query: 384 RLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQ 418
R ++ G R+L++ F L+R T ARQ
Sbjct: 403 RFGSV--GDDCRLLLWDFSVGMLHRPKVHQTSARQ 435
>sp|B0Y7H6|CREC_ASPFC Probable catabolite repression protein creC OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=creC PE=3
SV=2
Length = 566
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 39/215 (18%)
Query: 222 LLFVLYSNGQLMSCSVSKKGLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRR---G 278
L ++NGQL+ V K + A F ++ + +S P Q + +V +R
Sbjct: 242 LFMASHANGQLV---VYDKEKEDALFTPEIQDQSAEAVKASSTQPLQVLKSVNSRNQKTN 298
Query: 279 VVELYDLAES--------------ASLIRTVSLYDWGYSMDDT-GPVSCIAWTPDNSAFA 323
V L+ LA A ++ SL Y +D G + C+ W+PD
Sbjct: 299 PVALWKLANQRISHFAFSPDQRHLAVVLEDGSLRVMDYLKEDYYGGLICVCWSPDGKYIV 358
Query: 324 VGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQWDEYGY 383
G + +T+WS ++++ Q S +S+ P Q DE Y
Sbjct: 359 TGGQDDLVTIWSFPERKIVARC-QGHNSWVSAVAFDP---------------WQCDERTY 402
Query: 384 RLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQ 418
R ++ G R+L++ F L+R T ARQ
Sbjct: 403 RFGSV--GDDCRLLLWDFSVGMLHRPKVHQTSARQ 435
>sp|A1CTE6|CREC_ASPCL Probable catabolite repression protein creC OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=creC PE=3 SV=2
Length = 573
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 31/158 (19%)
Query: 263 SIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAF 322
+ +P+Q+ LAV G + + D + L S Y G + C+ W+PD
Sbjct: 314 AFSPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYY---------GGLICVCWSPDGKYI 364
Query: 323 AVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYEPLMSGTSMMQW--DE 380
G + LT+WS+ ++++ + + +S + W DE
Sbjct: 365 VTGGQDDLLTIWSLPERKIVARCQ------------------GHNSWVSAVAFDPWRCDE 406
Query: 381 YGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQ 418
YR ++ G R+L++ F L+R ARQ
Sbjct: 407 RTYRFGSV--GDDCRLLLWDFSVGMLHRPKVYQASARQ 442
>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3
Length = 486
Score = 33.1 bits (74), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
Query: 260 VCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDN 319
+ + +P + LA G+ V +DL+ W V I+W+PD
Sbjct: 119 ISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHW---------VLSISWSPDG 169
Query: 320 SAFAVGWKSRGLTVWSVSGCRLMS---TIRQISLSSISSPIVKPNQDCKYEPLMSGT-SM 375
A G K+ + +W S + + T ++++S + N +C+Y S S+
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 376 MQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYA 416
WD R G ++ V CL G G+ Y+
Sbjct: 230 RVWDTTAGRCERTLTGHAQSV-------TCLRWGGDGLLYS 263
>sp|P93340|GBLP_NICPL Guanine nucleotide-binding protein subunit beta-like protein
OS=Nicotiana plumbaginifolia PE=2 SV=1
Length = 326
Score = 33.1 bits (74), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 310 VSCIAWTPDN--SAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKPNQDCKYE 367
VSC+ ++P+N G R + +W+++ C+L +T+ + +++ V P+
Sbjct: 153 VSCVRFSPNNLQPTIVSGSWDRTVKIWNLTNCKLRATLAGHT-GYVNTTAVSPDGSLCAS 211
Query: 368 PLMSGTSMMQWD-EYGYRLYAIEEGSSERVLIFS 400
G ++ WD G +LY++E GS L FS
Sbjct: 212 GGKDGV-ILLWDLAEGKKLYSLESGSIIHSLCFS 244
>sp|Q2KJH4|WDR1_BOVIN WD repeat-containing protein 1 OS=Bos taurus GN=WDR1 PE=2 SV=3
Length = 606
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 285 LAESASLIRTVSLYDWGYSMDDT-----GPVSCIAWTPDNSAFAVGWKSRGLTVWSVS 337
+ +++ ++ S+ D GYS ++ + C+AW+PDN FA G + VW++S
Sbjct: 506 VCDASKVVTVFSVAD-GYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLS 562
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 237 VSKKGLKLAEFIKIDK----------ELGSGDAVCA-SIAPEQQILAVGTRRGVVELYDL 285
VS G K A+ I+K E+G + V + +++P+ +++A G+ +V L+D
Sbjct: 385 VSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA 444
Query: 286 AESASLIRTVSLYDWGYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSV 336
L R D YS +A++PD + A G + L +W +
Sbjct: 445 QTGYFLERYEGHLDSVYS---------VAFSPDGKSLASGSLDKSLKLWDL 486
>sp|O88342|WDR1_MOUSE WD repeat-containing protein 1 OS=Mus musculus GN=Wdr1 PE=1 SV=3
Length = 606
Score = 32.7 bits (73), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 285 LAESASLIRTVSLYDWGYSMDDT-----GPVSCIAWTPDNSAFAVGWKSRGLTVWSVS 337
+ +++ ++ S+ D GYS ++ + C+AW+PDN FA G + VW++S
Sbjct: 506 VCDASKVVTVFSVAD-GYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLS 562
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,433,802
Number of Sequences: 539616
Number of extensions: 10334744
Number of successful extensions: 23179
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 23031
Number of HSP's gapped (non-prelim): 219
length of query: 696
length of database: 191,569,459
effective HSP length: 125
effective length of query: 571
effective length of database: 124,117,459
effective search space: 70871069089
effective search space used: 70871069089
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)