BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005465
(695 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 317/653 (48%), Positives = 394/653 (60%), Gaps = 106/653 (16%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL +LE+LLR CQYHVTTT+QA AL+LLRENKNKFDLVISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+THGACDYLLKPVRIEELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQ-NGKLNKKRKDQNEDEDDEDDED 187
HVV R + D K++ +++N DK +GSG EG+GNSDQ NGK N+KRKDQ +++DED +D
Sbjct: 131 HVV-RSRFD-KNRGSNNNGDK-RDGSGN-EGVGNSDQNNGKGNRKRKDQYNEDEDEDRDD 186
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
+ +D QKK RVVW+VELH+KFVAAVNQLG +KA+PKKILDLMNVEKLTRENVASHL
Sbjct: 187 N---DDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHL 243
Query: 248 QKYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNS--TFR 305
QK+RLYLKRIS VANQQA M +S+ +++M+ ++G + G GQ+ R
Sbjct: 244 QKFRLYLKRISGVANQQAIMA----NSELHFMQMNGLDGFHHRPIPVGSGQYHGGAPAMR 299
Query: 306 SFPASGMLGRLNAPAGLGMHGL--PSSGMIPMRHAQNSDNTTNDQGKF-HPALLPGSHS- 361
SFP +G+LGRLN P+G+G+ L P +GM QN D GKF H + LP +HS
Sbjct: 300 SFPPNGILGRLNTPSGIGVRSLSSPPAGMF----LQNQ----TDIGKFHHVSSLPLNHSD 351
Query: 362 -GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSS-GFPDARIGFGRSTNPLL 419
GNILQG+P LE DQLQ N N + N N + +S FP F N L+
Sbjct: 352 GGNILQGLPMPLEFDQLQTNNNKSR-----NMNSNKSIAGTSMAFPS----FSTQQNSLI 402
Query: 420 DV-NNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDH--GRCNDNWSSAVQSSGI 476
NNN + LEGHPQ + P H + ++WS+AV SS
Sbjct: 403 SAPNNNVVVLEGHPQ------------------ATPPGFPGHQINKRLEHWSNAVSSSTH 444
Query: 477 QPNSFSLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQA 536
P P H +++ N DVS PL + DP +
Sbjct: 445 PP--------------PPAHNSNSI--------NHQFDVS---PLPHSRPDPLEWNNVSS 479
Query: 537 VQDAP-CRS-NVMFSPLNSAVSINGDVGPLGQCLD-TNKTFFHRSNEFDSLGQSNFVDHF 593
P C S N + SP LD TN F R+ +FDS + V
Sbjct: 480 SYSIPFCDSANTLSSP----------------ALDTTNPRAFCRNTDFDS---NTNVQPG 520
Query: 594 SMKINEVQRSSMQASSNLKEGYLMGQQKTQ-GSYISTSVDSLEDLFMSSMVKE 645
++ +SSN KEG+++GQQK Q G ++ SL+D+ S+M +E
Sbjct: 521 VFYGPSTDAMALLSSSNPKEGFVVGQQKLQSGGFMVADAGSLDDIVNSTMKQE 573
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 280/652 (42%), Positives = 356/652 (54%), Gaps = 159/652 (24%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFP G+RVLAVDDD TCL +L+TLL+RCQYHVTTT+QA TAL+LLRENKNKFDLVISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDV 70
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPDMDGFKLLELVGLEMDLPVIMLS + DPK VMKG+ HGACDYLLKPVRIEELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQ 130
Query: 129 HVVRRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDD 188
HVVR+ K+ N S NGSG + K N+KRK+Q E+E++E+ +D
Sbjct: 131 HVVRKSKLKKNKSNVS-------NGSGNCD---------KANRKRKEQYEEEEEEERGND 174
Query: 189 HNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
++DPT QKKPRV+W+ ELH KF+AAV+ LG+++AVPKKILDLMNV+KLTRENVASHLQ
Sbjct: 175 --NDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQ 232
Query: 249 KYRLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNY--HTVG---GPGQFQNST 303
K+R+ LK++S A QQAN A D +++M+S GLG + H G G GQF T
Sbjct: 233 KFRVALKKVSDDAIQQANRAAI----DSHFMQMNSQKGLGGFYHHHRGIPVGSGQFHGGT 288
Query: 304 --FRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGSHS 361
R + ++ LGRLN+ G GM P S P H ND
Sbjct: 289 TMMRHYSSNRNLGRLNS-LGAGMFQ-PVSSSFPRNH--------ND-------------G 325
Query: 362 GNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLLDV 421
GNILQG+P L++LQ+N NI + FP F N +
Sbjct: 326 GNILQGLP----LEELQINNNI-----------------NRAFP----SFTSQQNSPMVA 360
Query: 422 NNNPLFLEGHPQEAHSNKMFGNQSLMSLNSGSSSRLPDHGRCNDNWSSAVQSSGIQPNSF 481
+N L LEG+PQ S + N G S R ++WS+A S+ I
Sbjct: 361 PSNLLLLEGNPQS----------SSLPSNPGFSPHFEISKRL-EHWSNAALSTNI----- 404
Query: 482 SLGGDYKQPTLHPGHLRDNLSTMALPIGNSPCDVSSLHPLSNRFQDPKADLQFQAVQDAP 541
P S+ P L++ A D+
Sbjct: 405 --------------------------------------PQSDVHSKPDT-LEWNAFCDSA 425
Query: 542 CRSNVMFSPLNSAVSINGDVGPLGQCLDTNKTFFHRSNEFDSLGQSNFVDHFSMKINE-- 599
SPL V+ N D P C +T F +N Q++F + +++N+
Sbjct: 426 -------SPL---VNPNLDTNPASLCRNTG---FGSTNA----AQTDFF--YPLQMNQQP 466
Query: 600 ------VQRSSMQASSNLKEGYLMGQQKTQGSYISTSVDSLEDLFMSSMVKE 645
V + + SSN EG LMGQQK Q +++ SL+D+ S M +E
Sbjct: 467 ANNSGPVTEAQLFRSSNPNEGLLMGQQKLQSGLMASDAGSLDDIVNSLMTQE 518
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/396 (48%), Positives = 255/396 (64%), Gaps = 39/396 (9%)
Query: 7 NGDQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVIS 66
N D FP+ LRVL VDDDPTCL++LE +L C Y VT ++A +AL LLR+NKN FD+VIS
Sbjct: 20 NSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVIS 79
Query: 67 DVHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNI 126
DVHMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVRIE LKNI
Sbjct: 80 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNI 139
Query: 127 WQHVVRRKKIDA----------------KDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLN 170
WQHVVR+K+ + +D+ +D +N S EG NG+ +
Sbjct: 140 WQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEG------NGRSS 193
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKIL 230
+KRK+ E+ DD+ D+ ED ++ KKPRVVWSVELH++FVAAVNQLG+DKAVPKKIL
Sbjct: 194 RKRKE--EEVDDQGDD----KEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKIL 247
Query: 231 DLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAA-LGSSDPSYLRMSSVNGLGN 289
++MNV LTRENVASHLQKYR+YL+R+ V+ Q NM + + D S+ +SS+NG +
Sbjct: 248 EMMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNMNHSFMTGQDQSFGPLSSLNGF-D 306
Query: 290 YHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTNDQG 349
++ GQ + A+G LGR L G+ S ++ R N +N G
Sbjct: 307 LQSLAVTGQLPPQSLAQLQAAG-LGR----PTLAKPGMSVSPLVDQRSIFNFENPKIRFG 361
Query: 350 KFHPALLPGSHSGNILQGMPTSLELDQLQLNKNITS 385
H + ++GN+L G+PT + +L+ +N+ S
Sbjct: 362 DGHGQTM---NNGNLLHGVPTGSHM-RLRPGQNVQS 393
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 325 bits (832), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 188/390 (48%), Positives = 247/390 (63%), Gaps = 35/390 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
+ FPSGLRVL VDDDPTCL++LE +LR C Y VT ++A AL LLR+NK+ FD+VISDV
Sbjct: 31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDV 90
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
HMPDMDGFKLLE VGLEMDLPVIM+S + +V+KG+THGA DYL+KPVR+E LKNIWQ
Sbjct: 91 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQ 150
Query: 129 HVVRRKKID-------AKDQNNSDNQDKPHNGSGQAEGMGNS-----DQNGKLN------ 170
HVVR+++ + + + Q + H G G + D + +N
Sbjct: 151 HVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWR 210
Query: 171 ---KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPK 227
+KRKD+ E E+ DD+D ED + KKPRVVWSVELH++FVAAVNQLG++KAVPK
Sbjct: 211 SSSRKRKDE-EGEEQGDDKD----EDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPK 265
Query: 228 KILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANM-VAALGSSDPSYLRMSSVNG 286
KIL+LMNV LTRENVASHLQKYR+YL+R+ V+ Q N+ + + D S+ +S++NG
Sbjct: 266 KILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNG 325
Query: 287 LGNYHTVGGPGQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSGMIPMRHAQNSDNTTN 346
+ + GQ + A+G LGR PA + GLP S ++ R + DNT
Sbjct: 326 F-DLQALAVTGQLPAQSLAQLQAAG-LGR---PAMVSKSGLPVSSIVDERSIFSFDNTKT 380
Query: 347 DQGK---FHPALLPGSHSGNILQGMPTSLE 373
G+ H N+L G+PT L+
Sbjct: 381 RFGEGLGHHGQQPQQQPQMNLLHGVPTGLQ 410
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 217/499 (43%), Positives = 283/499 (56%), Gaps = 61/499 (12%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
D+FP G+RVLAVDD+PTCL LE LL RC+YHVT T ++ AL++LREN N FDLVISDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 69 HMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 128
MPD DGFKLLE +GLEMDLPVIMLS + D VMKGI HGACDYL+KPV ++EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 129 HVVRRK-KIDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDED 187
HVV++ K AK S++ P + + + +S +++ D E D D
Sbjct: 131 HVVKKNIKSYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREEDDGEGSEQDGDGSG 190
Query: 188 DHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
T+KKPRVVWS ELH+KFV+AV QLG+DKAVPKKILDLM++E LTRENVASHL
Sbjct: 191 --------TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHL 242
Query: 248 QKYRLYLKRISCVANQQANMVA-ALGSSDPSYLRMSSVNGLGNYHTVGGPGQFQNSTFRS 306
QKYRLYLK+I QQ NM A G+ D SY +M+ ++GL ++ + R
Sbjct: 243 QKYRLYLKKID--EGQQQNMTPDAFGTRDSSYFQMAQLDGLRDF-----------TAARQ 289
Query: 307 FPASGMLGR-----LNAP--AGLGMHGLPSSGMIPMRHAQNSDNTTNDQGKFHPALLPGS 359
P+SG+L R L P + + + G+ SS I H QNS N+ N G +H L P
Sbjct: 290 IPSSGLLSRSHLTKLQPPMYSSINLQGMNSSSFIQQGHHQNSSNSANPFGTYHSTLSPRI 349
Query: 360 HSGNILQGMPTSLELDQLQLNKNITSISELPNTKDNTTFHVSSGFPDARIGFGRSTNPLL 419
+ N+ Q TS L+ LQ ++ + I + D + F D + FG S+ L
Sbjct: 350 QNVNLFQR--TSSPLEPLQFPRSKSYIGDFKGLGDRA---IGGSFLDTCMPFGSSSTSLP 404
Query: 420 DVNNNPLFLEG-HPQEAH--------------SNKMFGNQSLMSLNSGSSSRLPDHGRCN 464
+ NPL L+ + Q H SN N S L SR P H
Sbjct: 405 SASTNPLMLQANYTQPLHIASDGIQPCIEGTPSNSASPNISFQGL-----SRFPGH---- 455
Query: 465 DNWSSAVQSSGIQPNSFSL 483
+W + ++ P+S L
Sbjct: 456 -SWQGNLNTTRFPPSSLPL 473
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 276 bits (706), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 222/347 (63%), Gaps = 28/347 (8%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDV 68
DQFPSGLR+L VDDD +CL +LE +L R Y VT SQA AL +LRE K+ FDLV+SDV
Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDV 64
Query: 69 HMPDMDGFKLLELVGL-EMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
HMP M+G+ LL+ VGL EMDLPVIM+S +G VM GI HGACDYL+KP+R EELKNIW
Sbjct: 65 HMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIW 124
Query: 128 QHVVRRKKIDAKDQNNSDN-QDKPHNGSGQAEGMGNSDQNGK-LNKKRKDQNEDEDD--E 183
QHVVRRK + K+ +S +D ++GS + + S+ + + L K R + + +
Sbjct: 125 QHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDR 184
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENV 243
DD +D DP KK RVVWS+ELH++FV AVN+LGIDKAVPK+IL+LMNV L+RENV
Sbjct: 185 DDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENV 244
Query: 244 ASHLQKYRLYLKRISCVANQQ---------ANMVAALGSSDPSYLRMSSVNG--LGNYHT 292
ASHLQK+RLYLKR+S A+Q N+ A + S ++++ G + N+H+
Sbjct: 245 ASHLQKFRLYLKRLSGEASQSNDSESTKRYENIQALVSSGQLHPQTLAALFGQPIDNHHS 304
Query: 293 ----VGGP----GQFQNSTFRSFPASGMLGRLNAPAGLGMHGLPSSG 331
V P G+ QN F +S N P + +HGL SS
Sbjct: 305 ASFGVWIPNDNLGRSQNEHFSVDVSSAS----NRPVSVAVHGLSSSA 347
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 178/255 (69%), Gaps = 19/255 (7%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
P GLRVL VDDDPT L +LE +L++C Y VTT A AL+LLRE K+ +D+VISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 72 DMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
DMDGFKLLE VGLE+DLPVIM+S +G+ VMKG+ HGACDYLLKP+R++ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 132 RRKKIDAKDQNNSDNQDKPHNGSGQAEGMGNSD--------QNGKLNKKRKDQNEDEDDE 183
R+K + +D + G A+ + D ++ KKRKD + ++
Sbjct: 128 RKKLQEVRDIEGCGYE-------GGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 184 DDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGID-KAVPKKILDLMNVEKLTREN 242
DE D + ++ KK RVVWS ELH KFV AVNQ+G D KA PKKILDLMNV LTREN
Sbjct: 181 QDESDPSS---SSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTREN 237
Query: 243 VASHLQKYRLYLKRI 257
VASHLQKYRLYL R+
Sbjct: 238 VASHLQKYRLYLSRL 252
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 149/249 (59%), Gaps = 3/249 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
+P GLRVL +DDD + L ++E LL +C Y VTT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
P DG +L+ V + +P ++++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 131 VRRKKIDAKDQNNSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
R++ D K+ N N +KP H S A + + + DD ++
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 190 NHE--DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
N E D K R+ W+ +LHR+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHL
Sbjct: 187 NGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHL 246
Query: 248 QKYRLYLKR 256
QKYR+ LK+
Sbjct: 247 QKYRMQLKK 255
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 149/249 (59%), Gaps = 3/249 (1%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
+P GLRVL +DDD + L ++E LL +C Y VTT A+ + +N DLVISD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
P DG +L+ V + +P ++++ +GD VMK + +GA D+LLKPVRIEEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 131 VRRKKIDAKDQNNSDNQDKP-HNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
R++ D K+ N N +KP H S A + + + DD ++
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 190 NHE--DPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHL 247
N E D K R+ W+ +LHR+F+AAVN LG DKAVPKKIL +M V+ LTRE VASHL
Sbjct: 187 NGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHL 246
Query: 248 QKYRLYLKR 256
QKYR+ LK+
Sbjct: 247 QKYRMQLKK 255
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 153/240 (63%), Gaps = 7/240 (2%)
Query: 11 FPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHM 70
FP GLRVL D+DP+ LL+LE L++ QY VT ++ A+ LR ++N+FDL + V+
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 71 PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
+ D F+ L +G EMDLP+I++S + K V K + +GA DYL+KP+R E+L+ +++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 131 VRRKKIDAKDQNNSDNQDKPHNGSGQ-AEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDH 189
V++ + + S + +G+ + +G+S KR E E +E+D DH
Sbjct: 158 VKKMR-----ERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDH 212
Query: 190 NHED-PTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQ 248
N ++ KK RVVW ELH+ F+ AV+ LG+++AVPKKILD+M V+ ++RENVASHLQ
Sbjct: 213 NDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 48/313 (15%)
Query: 10 QFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVH 69
QFP VL VD + T LL ++ ++++ Y V+ + A AL L K++ ++VI D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 70 MPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
MP +DG + L+ + ++DLPV+++S + + VMK +GACDY++KPV+ E + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 130 VVRRKKIDAKD-----------------QNN---SDNQDKPHNGSGQAEGMGNSDQNGKL 169
+VR++ I D Q++ +D D+ H S G GN QN +
Sbjct: 149 IVRKRLIFKPDVAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSITING-GNGIQNMEK 207
Query: 170 NKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQL-GIDKAVPKK 228
+ +K +KPR+ W+ ELH+KF+ A+ + GI+KA PK
Sbjct: 208 KQGKKP----------------------RKPRMTWTEELHQKFLEAIEIIGGIEKANPKV 245
Query: 229 ILDL---MNVEKLTRENVASHLQKYRLYLKRISCVANQQAN-MVAALGSSDPSYLRMSSV 284
+++ M +E +TR NVASHLQK+R+ L+ Q N A G+ PS +V
Sbjct: 246 LVECLQEMRIEGITRSNVASHLQKHRINLEENQIPQQTQGNGWATAYGTLAPSLQGSDNV 305
Query: 285 NGLGNYHTVGGPG 297
N + + GP
Sbjct: 306 NTTIPSYLMNGPA 318
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 152/282 (53%), Gaps = 21/282 (7%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
RVL V D L + L+ + Y VT A+ L +NK++ DLVI D HMPD++G
Sbjct: 42 RVLLVGADSNSSL--KNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
L ++G +MDLPV+++S + VM+ I +GACD+L+KPV E + +W+HV R++
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 136 IDAKDQNNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDEDDEDDHNHEDPT 195
+ DKP SG E + D+ L + ++ +E ++ D + PT
Sbjct: 160 -------SKSGLDKP-GESGTVE--SDPDEYDDLEQDNLYESNEEGSKNTCDHKEEKSPT 209
Query: 196 TQKKPRVVWSVELHRKFVAAVNQLG-IDKAVPKKILDLM----NVEKLTRENVASHLQKY 250
KKPR+ W+ ELH KF AV ++G ++KA PK IL M NV+ LTR NVASHLQKY
Sbjct: 210 --KKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKY 267
Query: 251 RLYLKRISCVANQQANMVAALGSSDPSYLRMSSVNGLGNYHT 292
R K+ Q + V G++ P +S L ++ T
Sbjct: 268 RQSSKKTCTPQEPQEDFV--WGNAGPDVTLAASKTLLSSHAT 307
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 142/270 (52%), Gaps = 30/270 (11%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ V+ VDDD L ++ +L+ +Y V AL L+ ++ DL+I+D +MP M+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMN 75
Query: 75 GFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
G +L + + E +LPV+++S + + + + ++ GA ++ KP+ +L I+Q +
Sbjct: 76 GLQLKKQITQEFGNLPVLVMSSDTNKE--EESLSCGAMGFIPKPIHPTDLTKIYQFALSN 133
Query: 134 KK----IDAKDQNNSDN------------------QDKPHNGSGQAEGMGNSDQNGKL-- 169
K+ + +QN+ D + K N S +++ + NG
Sbjct: 134 KRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVS 193
Query: 170 -NKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKK 228
+ RK++ + +D + P KK ++ W+ LH F+ A+ +G+DKAVPKK
Sbjct: 194 TDGSRKNRKRKPNGGPSDDGESMSQPA--KKKKIQWTDSLHDLFLQAIRHIGLDKAVPKK 251
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
IL M+V LTRENVASHLQKYR++L+R++
Sbjct: 252 ILAFMSVPYLTRENVASHLQKYRIFLRRVA 281
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 43/277 (15%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYH---VTTTSQAITALKLLRENKNKFDLVISDVHMP 71
+ V+ VDD+ L + +L + +Y V AL L+ ++ DL+I+D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 72 DMDGFKLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
M+G +L + + E +L V+++S DP + ++ GA ++ KP+ +L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSS--DPNKEEESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 131 VRRKK---------IDAKDQNNSDNQD-------------KPHNGSGQAE-------GMG 161
+ K+ + KD N S Q K N S +++ +
Sbjct: 134 LTYKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVS 193
Query: 162 NSDQNG-KLNKKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAVNQLG 220
+ NG + N+KRK + DD + + P KK ++ W+ L F+ A+ +G
Sbjct: 194 HVSTNGSRKNRKRKPKGGPSDDGESLS----QPP---KKKKIWWTNPLQDLFLQAIQHIG 246
Query: 221 IDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
DK VPKKIL +MNV LTRENVASHLQKYRL++KR+
Sbjct: 247 YDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 79/123 (64%), Gaps = 5/123 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V+ D + ++ LLR+C Y V S + A ++L+E + DL+++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL LV +E + +PVIM+S K+V+K + GA DYL+KP+R ELKN+WQHV
Sbjct: 97 GFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 131 VRR 133
RR
Sbjct: 156 WRR 158
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 14 GLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDM 73
LRVL V+ D + ++ LLR+C Y V + A ++L+ DL++++V +P +
Sbjct: 49 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 108
Query: 74 DGFKLLELVGLEMDL----PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
G+ LL L+ +E D+ PVIM+S V K + GA DYL+KP+R EL+N+WQH
Sbjct: 109 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 167
Query: 130 VVRRKKIDAKDQ---NNSDNQDKPHNGSGQAEGMGNSDQNGK 168
V RR+ A D N S Q K AEG ++ NGK
Sbjct: 168 VWRRQTSLAPDSFPWNESVGQQK-------AEGASANNSNGK 202
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
LRVL V++D + ++ LLR+C Y V + A + L + +N DLV+++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + D+PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 132 RR 133
RR
Sbjct: 201 RR 202
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL + D + ++ LLR+C Y V S + A +L+E DLV+++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 75 GFKLLELVGLEMD----LPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHV 130
GF LL + +E D +PVIM+S N +V K + GA D+L+KP+R EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 131 VRRK 134
R++
Sbjct: 162 WRKQ 165
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 23/173 (13%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
L+VL V++D + ++ LL+ C Y VT + A ++L + K+ DLV+++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K +++GA D+L+KP+R ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVW 183
Query: 132 RR----------------KKIDAKDQNNSDN----QDKPHNGSGQAEGMGNSD 164
RR K + + S+N D+ N SG + G+ N D
Sbjct: 184 RRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLSNQD 236
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL VD D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 132 RR 133
RR
Sbjct: 182 RR 183
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+RVL V++D ++ LLR C Y V S I A K+L + N D+V+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + ++PVIM+S + LV K ++ GA D+L+KP+R ELK +WQHV
Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 197
Query: 132 RR 133
RR
Sbjct: 198 RR 199
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++VL VD D + ++ LLR C Y V A L + +N DLV+++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 75 GFKLLELV---GLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVV 131
G LL + + ++PVIM+S N V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 132 RR 133
RR
Sbjct: 182 RR 183
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
+ +L +D D + L ++L++ V + A AL ++ + K + L+I+++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
L + L+ D+P+I+++ K +T AC L KP+ +++KN+WQHV +K
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 135 KIDAKDQNNSDNQDKPHN-GSGQAEGMGNSDQNGKLN--------------------KKR 173
+ K N +++Q+ + + Q E + + +++ +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 174 KDQNEDEDDEDDEDDHNHEDPTTQKKPRV-----VWSVELHRKFVAAVNQLGIDKAVPKK 228
K E E+ + K V +W+ E H KF+AA++ LG + PK
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKS 251
Query: 229 ILDLMNVEKLTRENVASHLQKYRLYLKRIS 258
IL++MN LT V SHLQKY+ + +IS
Sbjct: 252 ILEIMNDPNLTHRQVGSHLQKYKAQIDQIS 281
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
+KKP+V W+ ELHRKFV AV QLG+DKAVP +IL++MNV+ LTR NVASHLQKYR + K
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 257 ISCVANQQANM 267
+ + A+
Sbjct: 205 LLAREAEAASW 215
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 8 GDQF--PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVI 65
GD F S +R+L D+D T L + TLL C Y VT A + L D+++
Sbjct: 10 GDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIIL 69
Query: 66 SDVHMPDMDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
+++ +P G K+L + + DL PVIM+S + +V+K + GA DYL+KP+R E
Sbjct: 70 AEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNE 129
Query: 123 LKNIWQHVVRRKKI 136
L N+W H+ RR+++
Sbjct: 130 LLNLWTHMWRRRRM 143
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 13 SGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPD 72
S +R+L D DP+ + LL C Y VT + +L + D+++++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 73 MDGFKLLELVGLEMDL---PVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQH 129
FK+L+ + +L P+IM+S + +V+K + GA +YL+KP+R+ EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 130 VVRRKKI 136
V RR+++
Sbjct: 146 VWRRRRM 152
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLG+DKAVP +IL+LM V LTR NVASHLQKYR + K
Sbjct: 151 KRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKH 210
Query: 257 ISCVANQQANMV 268
+ + AN
Sbjct: 211 LLAREAEAANWT 222
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 197 QKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKR 256
++K +V W+ ELHR+FV AV QLGIDKAVP +IL+LM +E LTR N+ASHLQKYR + K
Sbjct: 213 KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKH 272
Query: 257 ISCVANQQANMV 268
+ + A+
Sbjct: 273 LMAREAEAASWT 284
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 202 VVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRI 257
V W+ ELHR+FV AV QLGIDKAVP +IL++M ++ LTR N+ASHLQKYR + K +
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 238
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 26/141 (18%)
Query: 142 NNSDNQDKPHNGSGQAEGMGNSDQNGKLNKKRKDQNEDEDDE---------DDEDDHNHE 192
N D+QD + S D + ++R D ++E+ E D D H E
Sbjct: 215 NMEDHQDIGESKSVDTTNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKE 274
Query: 193 DPT----------------TQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVE 236
D T T +K +V W+ ELH+KFV AV QLG+D+A+P +IL+LM V
Sbjct: 275 DETKPINKSSGIKNVSGNKTSRK-KVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVG 333
Query: 237 KLTRENVASHLQKYRLYLKRI 257
LTR NVASHLQK+R + K I
Sbjct: 334 TLTRHNVASHLQKFRQHRKNI 354
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 9 DQFPSGLRVLAV------DDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFD 62
+ FP GL+VL + D D + + L Y VTT + AL + +N F
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 63 LVISDVHM-PDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIE 121
+ I +V+M + + FK LE + LP IM+S + MK I GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 122 ELKNIWQHVVRR 133
+LKNIWQHVV +
Sbjct: 130 KLKNIWQHVVHK 141
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 12 PSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMP 71
PS +R+L DDD +L LL++ Y+VT A + + + + K+DLV++DV MP
Sbjct: 157 PSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMP 216
Query: 72 DMDGFKLLELVG---LEMDLPVIMLSGNG-DPKLVMKGITHGACDYLLKPVRIEELK--- 124
+ GF LL+ + + +PVI++SG D K I G D+L KP+ E LK
Sbjct: 217 HITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKI 276
Query: 125 -----NIWQHVVRRKKIDAK 139
+IWQ RRK+ + K
Sbjct: 277 DTVLQSIWQ---RRKEEEYK 293
>sp|O23100|APRR8_ARATH Putative two-component response regulator-like APRR8 OS=Arabidopsis
thaliana GN=APRR8 PE=2 SV=2
Length = 367
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 119/226 (52%), Gaps = 22/226 (9%)
Query: 9 DQFPSGLRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKN-KFDLVISD 67
++F + + VL +D D TCL L ++R+C Y V T++A L L+ NK+ K DLV+++
Sbjct: 8 ERFSNDICVLLLDSDATCLANLSEMIRKCGYKVVATTRA-DDLPLIINNKDKKIDLVLAE 66
Query: 68 VHMPDMDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIW 127
+ +M+ ++LLE + ++PV+ +SG +++ + GA L KP+ + K +W
Sbjct: 67 FRLIEMNKYELLEKIRSICEIPVV-VSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILW 125
Query: 128 QHVVRRKK-------IDAKDQNNSDNQDKP---------HNGSGQAEGMGN-SDQNGKLN 170
Q V R++ I+ ++N+S + +N + E + D+ G+ N
Sbjct: 126 QFTVSRQRNFRSQIDINPPEKNHSITHTQSLGAELKKNNNNSEVETEDLDKYKDELGQGN 185
Query: 171 KKRKDQNEDEDDEDDEDDHNHEDPTTQKKPRVVWSVELHRKFVAAV 216
K++ + D D + + +N D QKKP+++++ +L + + AV
Sbjct: 186 KRK--ERADTDTGEHTEKNNGSDLGDQKKPKLLFADDLQNETLEAV 229
>sp|P33112|SPAR_BACIU Transcriptional regulatory protein SpaR OS=Bacillus subtilis
GN=spaR PE=3 SV=1
Length = 220
Score = 72.0 bits (175), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++LAVDD+ L+L++ +LRR Q+ V + + +DL++ DV MPD+DG
Sbjct: 3 KILAVDDEKDILVLIQNILRRDQHQVDILDHVHGQPPDVFQG---YDLILLDVMMPDIDG 59
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
F+L + + +D P++ L+ + + ++KG+ G DY+ KP + EL +RR++
Sbjct: 60 FELCKQIRPLVDCPILFLTAKTEEEAIVKGLITGGDDYITKPFGVRELSARVNAHLRRER 119
Query: 136 ID 137
D
Sbjct: 120 RD 121
>sp|O78428|YCF27_GUITH Probable transcriptional regulator ycf27 OS=Guillardia theta
GN=ycf27 PE=3 SV=1
Length = 254
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
+VL VDD+ + +LET L Y V T S AL L + D+VI D+ MP +DG
Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQEMP--DVVILDIMMPKLDG 73
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + + D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 74 YGVCQEIRKDSDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRR 131
>sp|Q4L8L9|HSSR_STAHJ Heme response regulator HssR OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=hssR PE=3 SV=1
Length = 224
Score = 70.5 bits (171), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++ L VDDD L + L Q T + +A+ L NK D+ + D+ M MD
Sbjct: 2 VKCLIVDDDYKILHYVSQHLEAAQIQTVTQASGESAIAYLA--NNKVDIAVVDIMMTGMD 59
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
GF+L +L+ + DLPVIML+ + G DY+ KP ++EL Q V+RR
Sbjct: 60 GFELCQLLKNDYDLPVIMLTARDALSDKERAFVSGTDDYVTKPFEVKELLFRIQAVLRRY 119
Query: 135 KIDAKD 140
+I+++D
Sbjct: 120 QINSQD 125
>sp|P51358|YCF27_PORPU Probable transcriptional regulator ycf27 OS=Porphyra purpurea
GN=ycf27 PE=3 SV=1
Length = 243
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ + +LET L Y V T S AL + R K LV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFR--KEYPSLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ G+ + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>sp|Q1XDC9|YCF27_PORYE Probable transcriptional regulator ycf27 OS=Porphyra yezoensis
GN=ycf27 PE=3 SV=2
Length = 243
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L VDD+ + +LET L Y V T S AL + R K LV+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVFR--KEYPSLVVLDVMMPKLDG 64
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ G+ + G+ GA DY++KP +EL+ + V+RR
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 195 TTQKKPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 252
TT KPR+ W+VELH +FV AV QL G DKA PK I+ +M V+ LT ++ SHLQK+RL
Sbjct: 30 TTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88
>sp|P48259|YCF27_CYAPA Probable transcriptional regulator ycf27 OS=Cyanophora paradoxa
GN=ycf27 PE=3 SV=1
Length = 239
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLR-ENKNKFDLVISDVHMPDMD 74
++L VDD+ + +LET L Y V T + AL + + E+ N LV+ DV MP +D
Sbjct: 7 KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQLEHPN---LVVLDVMMPKLD 63
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
G+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + ++RR
Sbjct: 64 GYGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRRT 123
Query: 135 K 135
+
Sbjct: 124 E 124
>sp|Q04942|AFSQ1_STRCO Transcriptional regulatory protein AfsQ1 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=afsQ1 PE=1 SV=2
Length = 225
Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L ++DD LE L R + V T + LKLLRE + DL++ DV +P +DGF
Sbjct: 4 LLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLREQRP--DLIVLDVMLPGIDGF 61
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKKI 136
++ + LP+I+L+ D V+ G+ GA DY++KPV+ L + V+RR +
Sbjct: 62 EVCRRIRRTDQLPIILLTARNDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRRGER 121
Query: 137 DAKD 140
++ D
Sbjct: 122 ESTD 125
>sp|P28257|YCF27_GALSU Probable transcriptional regulator ycf27 OS=Galdieria sulphuraria
GN=ycf27 PE=3 SV=1
Length = 255
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDG 75
++L DD+ + +LET L Y V T +AL L +K +LV+ DV MP +DG
Sbjct: 9 KILIADDESSIRRILETRLSIIGYEVLTAPDGRSALFLF--HKEHPNLVVLDVMMPKIDG 66
Query: 76 FKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + + E D+P+IML+ GD + G+ GA DY++KP +EL+ + V+RR
Sbjct: 67 YGVCQEIRKESDIPIIMLTALGDVTDRITGLELGADDYVVKPFSPKELEARIRCVLRR 124
>sp|P28835|YCF27_PORAE Probable transcriptional regulator ycf27 OS=Porphyridium aerugineum
GN=ycf27 PE=3 SV=1
Length = 240
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLL-RENKNKFDLVISDVHMPDMD 74
++L +DD+ + +LET L Y V + + AL + RE+ N LV+ D+ MP +D
Sbjct: 5 KILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFKREHPN---LVVLDLMMPKLD 61
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
G+ + + + E D+P+IML+ D + G+ GA DY++KP +EL+ + V+RR
Sbjct: 62 GYGVCQELRKESDVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRR- 120
Query: 135 KIDAKDQNN 143
+D NN
Sbjct: 121 -VDKASSNN 128
>sp|Q9TLQ4|YCF27_CYACA Probable transcriptional regulator ycf27 OS=Cyanidium caldarium
GN=ycf27 PE=3 SV=1
Length = 249
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDD+ +L+T L Y V+T ALK+ + DL+I DV MP +DG+
Sbjct: 14 LLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIF--TTHSIDLIILDVMMPKLDGY 71
Query: 77 KLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRR 133
+ + + E D+P+IML+ D + G+ GA DY++KP EL+ Q ++RR
Sbjct: 72 GVCQEIRKESDIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128
>sp|P14375|ZRAR_ECOLI Transcriptional regulatory protein ZraR OS=Escherichia coli (strain
K12) GN=zraR PE=1 SV=2
Length = 441
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDD + +L+ LLR Y+V + AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQV--FDLVLCDVRMAEMDGI 65
Query: 77 KLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
L E+ L +PV++++ + ++ + GA DYL+KP+ + L+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>sp|Q9APD9|ZRAR_KLEOX Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca
GN=zraR PE=3 SV=1
Length = 443
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDD + +L+ LLR Y V + + AL+ +RE FDLV+ D+ M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVRE--KVFDLVLCDIRMAEMDGI 65
Query: 77 KLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
+ L E+ +PV++++ ++ + GA DYL+KP+ ++L+
Sbjct: 66 ETLKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>sp|Q8X613|ZRAR_ECO57 Transcriptional regulatory protein ZraR OS=Escherichia coli O157:H7
GN=zraR PE=3 SV=1
Length = 441
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
+L VDDD + +L+ LLR Y+V + AL+ +RE FDLV+ DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERV--FDLVLCDVRMAEMDGI 65
Query: 77 KLL-ELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELK 124
L E+ L +PV++++ + ++ + GA DYL+KP+ + L+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>sp|A0QTK2|MTRA_MYCS2 DNA-binding response regulator MtrA OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=mtrA PE=1 SV=1
Length = 228
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 16 RVLAVDDDPTCLLLLETLLRRCQYHVTTT---SQAITALKLLRENKNKFDLVISDVHMPD 72
R+L VDDDP+ +L +LR + SQA+TA++ LR DLV+ D+ +P
Sbjct: 7 RILVVDDDPSLAEMLTIVLRGEGFDTAVIGDGSQALTAVRELRP-----DLVLLDLMLPG 61
Query: 73 MDGFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEE 122
M+G + ++ + +P++ML+ D V+ G+ GA DY++KP + +E
Sbjct: 62 MNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYVMKPFKPKE 111
>sp|P28787|NTRC_PROHU Nitrogen regulation protein NR(I) OS=Proteus hauseri GN=ntrC PE=3
SV=1
Length = 473
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 17 VLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMDGF 76
V VDDD + +LE + R A LK L N + D+++SD+ MPDMDG
Sbjct: 6 VWVVDDDSSIRWVLERAITREGMLCRAFEHANDVLKAL--NSEQPDVLLSDIRMPDMDGL 63
Query: 77 KLLELVGLEM-DLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRKK 135
LL+++ + LPVI+++ + D + GA DYL KP I+E + + + +
Sbjct: 64 SLLKIIKEQYPTLPVIIMTAHSDLDAAVNAYQQGAFDYLPKPFDIDETLALIERAITHYR 123
Query: 136 IDAKDQNNSDN 146
+ K NN++N
Sbjct: 124 -EQKQPNNAEN 133
>sp|Q7A039|HSSR_STAAW Heme response regulator HssR OS=Staphylococcus aureus (strain MW2)
GN=hssR PE=3 SV=1
Length = 224
Score = 63.9 bits (154), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 15 LRVLAVDDDPTCLLLLETLLRRCQYHVTTTSQAITALKLLRENKNKFDLVISDVHMPDMD 74
++ L VDDDP L + + L+ T ALKLL K + D+ + D+ M MD
Sbjct: 2 VQCLVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLE--KQRVDIAVVDIMMDGMD 59
Query: 75 GFKLLELVGLEMDLPVIMLSGNGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVVRRK 134
GF+L + + D+PVIML+ + G DY+ KP ++EL + V+RR
Sbjct: 60 GFQLCNTLKNDYDIPVIMLTARDALSDKERAFISGTDDYVTKPFEVKELIFRIRAVLRRY 119
Query: 135 KIDAKDQ 141
I++ +
Sbjct: 120 NINSNSE 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 268,575,949
Number of Sequences: 539616
Number of extensions: 12061177
Number of successful extensions: 81537
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 811
Number of HSP's that attempted gapping in prelim test: 68568
Number of HSP's gapped (non-prelim): 8609
length of query: 695
length of database: 191,569,459
effective HSP length: 125
effective length of query: 570
effective length of database: 124,117,459
effective search space: 70746951630
effective search space used: 70746951630
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)