Query 005466
Match_columns 695
No_of_seqs 275 out of 1670
Neff 5.5
Searched_HMMs 29240
Date Tue Mar 26 02:11:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005466.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005466hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wg3_C Hedgehog-interacting pr 100.0 7.5E-67 2.6E-71 581.0 34.5 353 202-645 1-375 (463)
2 2g8s_A Glucose/sorbosone dehyd 100.0 1.6E-56 5.4E-61 479.2 37.6 341 200-641 3-352 (353)
3 1cru_A Protein (soluble quinop 100.0 8.8E-54 3E-58 474.3 36.9 356 200-638 12-431 (454)
4 3das_A Putative oxidoreductase 100.0 1.8E-53 6.1E-58 457.9 33.4 311 203-641 20-346 (347)
5 3a9g_A Putative uncharacterize 100.0 8.7E-52 3E-56 443.4 36.5 324 200-644 14-353 (354)
6 2ism_A Putative oxidoreductase 100.0 4E-47 1.4E-51 405.9 33.5 312 202-640 18-352 (352)
7 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 0.00017 5.7E-09 72.2 28.7 269 207-641 10-297 (314)
8 3e5z_A Putative gluconolactona 98.5 0.00014 4.7E-09 73.1 28.1 176 203-483 16-194 (296)
9 2qc5_A Streptogramin B lactona 98.4 7.5E-05 2.6E-09 73.7 25.6 233 216-641 65-298 (300)
10 3fvz_A Peptidyl-glycine alpha- 98.4 2.7E-05 9.2E-10 80.5 23.2 28 614-641 291-320 (329)
11 2qc5_A Streptogramin B lactona 98.4 0.00037 1.3E-08 68.7 28.5 233 216-641 23-258 (300)
12 2z2n_A Virginiamycin B lyase; 98.3 0.00072 2.5E-08 66.5 27.9 233 216-641 18-253 (299)
13 3dr2_A Exported gluconolactona 98.2 0.00042 1.5E-08 70.5 26.4 169 204-481 34-209 (305)
14 2z2n_A Virginiamycin B lyase; 98.2 0.00091 3.1E-08 65.8 27.8 235 216-644 60-296 (299)
15 1rwi_B Serine/threonine-protei 98.2 0.00025 8.6E-09 69.4 22.7 232 216-641 27-262 (270)
16 4hw6_A Hypothetical protein, I 98.2 0.00083 2.8E-08 73.5 28.2 275 216-641 142-431 (433)
17 3g4e_A Regucalcin; six bladed 98.1 0.0019 6.4E-08 65.6 28.6 156 216-483 16-172 (297)
18 3v64_C Agrin; beta propeller, 98.1 0.00016 5.5E-09 76.5 20.2 169 202-488 60-231 (349)
19 3v65_B Low-density lipoprotein 98.0 0.0001 3.5E-09 79.1 17.4 165 206-488 107-274 (386)
20 3hrp_A Uncharacterized protein 98.0 0.00088 3E-08 72.3 24.8 176 206-483 163-346 (409)
21 3tc9_A Hypothetical hydrolase; 98.0 0.0029 9.8E-08 69.0 28.7 280 216-641 140-428 (430)
22 3p5b_L Low density lipoprotein 98.0 0.00028 9.7E-09 76.2 19.9 167 208-488 105-274 (400)
23 3sov_A LRP-6, low-density lipo 98.0 0.00028 9.5E-09 74.0 18.7 164 208-488 28-194 (318)
24 3m0c_C LDL receptor, low-densi 97.9 0.00028 9.5E-09 83.4 20.0 167 208-488 417-586 (791)
25 1ijq_A LDL receptor, low-densi 97.9 0.001 3.5E-08 69.0 20.4 163 210-488 25-192 (316)
26 3hrp_A Uncharacterized protein 97.8 0.00059 2E-08 73.7 18.9 60 216-293 222-285 (409)
27 4a0p_A LRP6, LRP-6, low-densit 97.8 0.00063 2.2E-08 78.2 19.8 150 216-484 40-190 (628)
28 1npe_A Nidogen, entactin; glyc 97.8 0.0016 5.6E-08 64.7 19.7 151 216-483 39-190 (267)
29 3s94_A LRP-6, low-density lipo 97.7 0.0011 3.6E-08 76.1 19.2 160 210-486 35-197 (619)
30 3kya_A Putative phosphatase; s 97.7 0.028 9.4E-07 63.1 30.1 77 560-644 390-476 (496)
31 1rwi_B Serine/threonine-protei 97.6 0.0011 3.9E-08 64.7 15.9 148 216-486 111-259 (270)
32 3v65_B Low-density lipoprotein 97.5 0.0039 1.3E-07 66.7 19.0 158 210-487 154-314 (386)
33 2dg1_A DRP35, lactonase; beta 97.5 0.014 4.8E-07 59.0 22.2 166 206-482 36-204 (333)
34 3v64_C Agrin; beta propeller, 97.5 0.0058 2E-07 64.4 19.4 159 210-488 111-272 (349)
35 3g4e_A Regucalcin; six bladed 97.4 0.0029 9.9E-08 64.2 16.3 62 374-483 202-265 (297)
36 3s94_A LRP-6, low-density lipo 97.4 0.0049 1.7E-07 70.6 19.9 160 212-489 346-508 (619)
37 3m0c_C LDL receptor, low-densi 97.4 0.0072 2.4E-07 71.4 21.7 156 213-488 469-629 (791)
38 1npe_A Nidogen, entactin; glyc 97.4 0.01 3.5E-07 58.8 19.8 152 212-483 76-230 (267)
39 4hw6_A Hypothetical protein, I 97.4 0.0077 2.6E-07 65.8 19.4 30 458-488 401-430 (433)
40 3sov_A LRP-6, low-density lipo 97.3 0.016 5.4E-07 60.6 20.9 158 209-487 73-234 (318)
41 4a0p_A LRP6, LRP-6, low-densit 97.3 0.014 4.7E-07 67.1 21.5 157 210-488 75-234 (628)
42 3tc9_A Hypothetical hydrolase; 97.3 0.0078 2.7E-07 65.6 18.5 30 458-488 398-427 (430)
43 1q7f_A NHL, brain tumor CG1071 97.3 0.029 1E-06 55.4 21.2 70 203-294 108-182 (286)
44 2qe8_A Uncharacterized protein 97.3 0.13 4.3E-06 53.3 26.9 71 206-294 8-85 (343)
45 2p4o_A Hypothetical protein; p 97.3 0.2 7E-06 50.8 29.7 63 207-293 25-89 (306)
46 3sre_A PON1, serum paraoxonase 97.3 0.017 6E-07 62.0 20.4 77 372-483 166-244 (355)
47 3p5b_L Low density lipoprotein 97.2 0.029 1E-06 60.3 21.5 158 210-488 154-317 (400)
48 1ijq_A LDL receptor, low-densi 97.2 0.031 1.1E-06 57.7 20.8 151 212-483 74-230 (316)
49 1q7f_A NHL, brain tumor CG1071 97.2 0.021 7.2E-07 56.5 18.5 141 216-481 80-227 (286)
50 1n7d_A LDL receptor, low-densi 97.0 0.0011 3.8E-08 77.0 9.1 71 372-487 497-567 (699)
51 2fp8_A Strictosidine synthase; 97.0 0.018 6.1E-07 58.9 16.6 163 216-488 129-310 (322)
52 2fp8_A Strictosidine synthase; 96.9 0.014 4.9E-07 59.6 14.8 79 374-482 129-207 (322)
53 3fvz_A Peptidyl-glycine alpha- 96.8 0.079 2.7E-06 54.3 20.0 167 216-489 146-320 (329)
54 2p4o_A Hypothetical protein; p 96.8 0.029 9.9E-07 57.2 16.5 60 373-480 214-278 (306)
55 3vgz_A Uncharacterized protein 96.8 0.11 3.6E-06 52.2 20.2 62 216-293 188-249 (353)
56 1pjx_A Dfpase, DIISOPROPYLFLUO 96.7 0.049 1.7E-06 54.1 17.1 61 374-482 229-290 (314)
57 3hfq_A Uncharacterized protein 96.7 0.098 3.3E-06 53.0 19.3 60 216-292 144-204 (347)
58 3vgz_A Uncharacterized protein 96.7 0.11 3.7E-06 52.1 19.3 57 216-292 144-202 (353)
59 3e5z_A Putative gluconolactona 96.6 0.12 4E-06 51.5 18.5 56 375-480 222-277 (296)
60 2ghs_A AGR_C_1268P; regucalcin 96.5 0.15 5.1E-06 52.4 19.6 61 374-482 233-294 (326)
61 3dsm_A Uncharacterized protein 96.5 0.13 4.4E-06 52.9 18.9 60 372-478 226-285 (328)
62 3dsm_A Uncharacterized protein 96.4 0.27 9.2E-06 50.5 20.6 164 204-479 74-244 (328)
63 1ri6_A Putative isomerase YBHE 96.4 0.31 1.1E-05 48.2 20.4 63 216-292 132-195 (343)
64 3kya_A Putative phosphatase; s 96.3 0.11 3.7E-06 58.4 18.1 30 457-487 442-471 (496)
65 2dg1_A DRP35, lactonase; beta 96.2 0.2 6.8E-06 50.4 17.9 24 216-241 138-168 (333)
66 2ghs_A AGR_C_1268P; regucalcin 96.1 0.25 8.5E-06 50.7 18.6 70 374-490 137-206 (326)
67 3dr2_A Exported gluconolactona 96.1 0.11 3.7E-06 52.5 15.5 25 375-419 243-267 (305)
68 3hfq_A Uncharacterized protein 96.1 0.48 1.6E-05 47.9 20.2 30 216-246 89-119 (347)
69 3scy_A Hypothetical bacterial 96.0 0.68 2.3E-05 47.1 21.0 66 216-292 158-228 (361)
70 3u4y_A Uncharacterized protein 96.0 0.55 1.9E-05 46.7 20.0 74 204-293 118-194 (331)
71 1n7d_A LDL receptor, low-densi 95.9 0.025 8.7E-07 65.5 11.0 63 372-483 541-606 (699)
72 1jof_A Carboxy-CIS,CIS-muconat 95.8 0.54 1.9E-05 48.5 19.6 61 216-292 148-210 (365)
73 1tl2_A L10, protein (tachylect 95.8 0.037 1.3E-06 56.3 10.2 71 206-292 31-104 (236)
74 2qe8_A Uncharacterized protein 95.7 0.066 2.2E-06 55.4 11.8 136 216-419 198-337 (343)
75 2p9w_A MAL S 1 allergenic prot 95.5 0.29 9.9E-06 52.2 16.0 68 373-489 139-213 (334)
76 3a9g_A Putative uncharacterize 95.1 0.84 2.9E-05 48.2 18.1 192 216-482 76-287 (354)
77 1l0q_A Surface layer protein; 95.0 2.9 0.0001 42.5 21.6 66 206-292 24-91 (391)
78 3u4y_A Uncharacterized protein 95.0 1.5 5.1E-05 43.6 18.8 67 207-294 76-147 (331)
79 1nir_A Nitrite reductase; hemo 94.7 4.1 0.00014 45.3 23.5 74 204-293 169-244 (543)
80 2ism_A Putative oxidoreductase 94.6 0.53 1.8E-05 49.5 15.1 27 206-234 193-222 (352)
81 3qqz_A Putative uncharacterize 94.6 4.5 0.00016 41.1 22.4 56 216-292 30-86 (255)
82 2iwa_A Glutamine cyclotransfer 94.4 1.6 5.5E-05 44.8 17.7 33 460-493 207-239 (266)
83 2g8s_A Glucose/sorbosone dehyd 93.8 1 3.4E-05 47.4 15.2 38 449-492 8-46 (353)
84 1l0q_A Surface layer protein; 93.8 6.4 0.00022 39.9 21.0 68 204-292 64-133 (391)
85 1cru_A Protein (soluble quinop 93.7 1.1 3.7E-05 49.2 15.7 40 448-492 16-55 (454)
86 3qqz_A Putative uncharacterize 93.6 4.1 0.00014 41.5 18.8 65 216-292 73-138 (255)
87 1ri6_A Putative isomerase YBHE 93.4 6.4 0.00022 38.6 22.9 59 216-292 87-146 (343)
88 3das_A Putative oxidoreductase 93.3 3.1 0.00011 44.4 17.9 198 211-481 76-282 (347)
89 3scy_A Hypothetical bacterial 92.9 2.2 7.6E-05 43.2 15.6 63 216-293 214-277 (361)
90 1nir_A Nitrite reductase; hemo 92.2 5.1 0.00018 44.5 18.6 59 216-293 283-342 (543)
91 1jof_A Carboxy-CIS,CIS-muconat 91.2 5.5 0.00019 40.8 16.5 22 460-482 255-277 (365)
92 3no2_A Uncharacterized protein 91.0 14 0.00047 37.0 24.2 68 560-644 175-254 (276)
93 3bws_A Protein LP49; two-domai 90.3 18 0.00061 37.1 22.2 67 206-293 246-321 (433)
94 3nok_A Glutaminyl cyclase; bet 89.8 9.2 0.00031 39.5 16.3 23 460-483 236-258 (268)
95 3nol_A Glutamine cyclotransfer 89.0 17 0.00059 37.3 17.6 31 460-491 226-256 (262)
96 2hqs_A Protein TOLB; TOLB, PAL 89.0 18 0.00061 38.1 18.5 26 216-242 182-210 (415)
97 2p9w_A MAL S 1 allergenic prot 88.2 3.9 0.00014 43.5 12.5 20 272-295 137-156 (334)
98 1qks_A Cytochrome CD1 nitrite 88.1 38 0.0013 38.0 22.7 75 204-294 187-263 (567)
99 3bws_A Protein LP49; two-domai 87.7 27 0.00091 35.8 21.4 57 216-293 215-272 (433)
100 3k26_A Polycomb protein EED; W 86.9 14 0.00047 36.5 15.1 76 208-294 11-92 (366)
101 2iwa_A Glutamine cyclotransfer 86.8 29 0.001 35.3 18.8 25 216-242 24-51 (266)
102 1fwx_A Nitrous oxide reductase 86.5 1.6 5.6E-05 49.9 8.9 75 207-293 270-348 (595)
103 4g56_B MGC81050 protein; prote 86.0 10 0.00036 38.8 14.2 60 216-292 185-244 (357)
104 4ery_A WD repeat-containing pr 85.8 26 0.0009 34.2 16.5 62 204-282 12-76 (312)
105 3mbr_X Glutamine cyclotransfer 85.1 33 0.0011 34.7 16.9 30 460-490 205-234 (243)
106 1jmx_B Amine dehydrogenase; ox 84.8 9.6 0.00033 37.5 12.8 26 216-242 46-72 (349)
107 4g56_B MGC81050 protein; prote 84.4 3.1 0.00011 42.9 9.2 58 216-291 46-110 (357)
108 2ymu_A WD-40 repeat protein; u 84.2 12 0.00042 40.0 14.2 55 216-292 20-74 (577)
109 1jmx_B Amine dehydrogenase; ox 84.0 8.4 0.00029 37.9 11.9 58 216-293 3-61 (349)
110 3sjl_D Methylamine dehydrogena 83.0 6.9 0.00023 42.3 11.5 56 217-294 37-97 (386)
111 3c75_H MADH, methylamine dehyd 83.0 57 0.002 35.4 20.9 69 206-293 111-195 (426)
112 3fm0_A Protein CIAO1; WDR39,SG 82.7 15 0.00052 37.1 13.5 53 216-282 109-161 (345)
113 3ow8_A WD repeat-containing pr 82.6 12 0.00041 37.7 12.7 58 216-294 210-267 (321)
114 3f3f_A Nucleoporin SEH1; struc 82.2 29 0.00099 33.3 14.8 62 216-292 15-76 (351)
115 2ecf_A Dipeptidyl peptidase IV 82.0 52 0.0018 36.7 18.8 19 216-235 212-230 (741)
116 1got_B GT-beta; complex (GTP-b 81.7 20 0.00069 36.1 14.0 58 216-294 188-245 (340)
117 3iz6_a 40S ribosomal protein R 81.4 16 0.00053 37.6 13.2 26 216-242 253-278 (380)
118 2ojh_A Uncharacterized protein 81.3 36 0.0012 31.9 15.5 25 216-242 45-69 (297)
119 3ow8_A WD repeat-containing pr 80.9 17 0.00058 36.6 13.0 56 216-292 168-223 (321)
120 2ynn_A Coatomer subunit beta'; 79.9 24 0.00081 34.9 13.6 50 216-282 17-66 (304)
121 4gqb_B Methylosome protein 50; 79.5 22 0.00074 36.5 13.5 61 216-294 86-146 (344)
122 3frx_A Guanine nucleotide-bind 79.2 44 0.0015 33.3 15.4 49 216-282 200-248 (319)
123 2xyi_A Probable histone-bindin 78.4 30 0.001 36.2 14.4 63 216-294 235-297 (430)
124 2ymu_A WD-40 repeat protein; u 78.4 28 0.00097 37.2 14.5 49 216-282 471-519 (577)
125 1sq9_A Antiviral protein SKI8; 78.3 51 0.0017 33.0 15.6 26 216-242 237-265 (397)
126 3vu4_A KMHSV2; beta-propeller 78.2 29 0.00099 35.3 13.9 59 216-294 199-259 (355)
127 1got_B GT-beta; complex (GTP-b 78.2 38 0.0013 34.0 14.7 58 216-292 230-287 (340)
128 3sre_A PON1, serum paraoxonase 78.0 8 0.00027 41.2 9.8 92 375-493 54-149 (355)
129 3azo_A Aminopeptidase; POP fam 78.0 48 0.0016 36.4 16.6 26 216-242 191-224 (662)
130 4h5i_A Guanine nucleotide-exch 77.7 48 0.0016 34.0 15.5 73 204-296 167-240 (365)
131 2z3z_A Dipeptidyl aminopeptida 77.7 61 0.0021 35.9 17.4 16 216-232 184-199 (706)
132 3fm0_A Protein CIAO1; WDR39,SG 77.6 46 0.0016 33.5 15.1 60 216-294 65-124 (345)
133 1pby_B Quinohemoprotein amine 76.8 56 0.0019 31.6 15.3 26 216-242 37-63 (337)
134 3vl1_A 26S proteasome regulato 76.4 46 0.0016 33.8 14.8 27 216-242 294-320 (420)
135 3odt_A Protein DOA1; ubiquitin 76.1 35 0.0012 32.7 13.1 49 216-282 188-236 (313)
136 4gqb_B Methylosome protein 50; 76.0 22 0.00074 36.6 12.2 59 216-294 131-189 (344)
137 2aq5_A Coronin-1A; WD40 repeat 75.9 73 0.0025 32.4 19.2 57 216-282 85-142 (402)
138 1k8k_C P40, ARP2/3 complex 41 75.6 33 0.0011 33.9 13.1 51 216-281 12-62 (372)
139 1gxr_A ESG1, transducin-like e 75.1 61 0.0021 31.2 15.2 54 216-282 55-108 (337)
140 3gre_A Serine/threonine-protei 74.5 33 0.0011 35.3 13.3 63 216-294 218-280 (437)
141 1xfd_A DIP, dipeptidyl aminope 74.5 23 0.00079 39.4 12.8 25 216-242 20-44 (723)
142 3f3f_A Nucleoporin SEH1; struc 74.4 62 0.0021 30.9 14.8 72 216-291 114-187 (351)
143 4e54_B DNA damage-binding prot 74.1 30 0.001 36.2 12.9 60 216-292 123-182 (435)
144 3azo_A Aminopeptidase; POP fam 74.0 53 0.0018 36.1 15.5 26 216-242 133-168 (662)
145 1pby_B Quinohemoprotein amine 73.2 69 0.0024 30.9 17.1 15 374-389 85-100 (337)
146 1qks_A Cytochrome CD1 nitrite 73.2 1.2E+02 0.0042 33.8 20.9 35 206-241 232-272 (567)
147 1gxr_A ESG1, transducin-like e 73.2 68 0.0023 30.9 15.4 49 216-282 228-276 (337)
148 3no2_A Uncharacterized protein 73.1 77 0.0026 31.4 18.9 55 375-480 129-184 (276)
149 2hes_X YDR267CP; beta-propelle 73.0 53 0.0018 32.8 14.1 64 216-293 62-125 (330)
150 2wg3_C Hedgehog-interacting pr 73.0 9.7 0.00033 41.9 9.1 73 216-292 142-238 (463)
151 1erj_A Transcriptional repress 72.9 29 0.00098 35.8 12.3 58 216-294 169-226 (393)
152 2hqs_A Protein TOLB; TOLB, PAL 72.7 97 0.0033 32.4 16.9 26 216-242 226-254 (415)
153 3lrv_A PRE-mRNA-splicing facto 71.9 25 0.00087 35.2 11.4 57 216-292 129-187 (343)
154 1nr0_A Actin interacting prote 71.9 31 0.0011 38.1 13.1 59 216-294 151-209 (611)
155 4a9v_A PHOX; hydrolase, beta-p 71.6 7.6 0.00026 44.4 7.9 96 375-481 388-497 (592)
156 2aq5_A Coronin-1A; WD40 repeat 71.1 94 0.0032 31.6 21.2 51 216-281 135-186 (402)
157 4a9v_A PHOX; hydrolase, beta-p 71.0 1.2E+02 0.0042 34.6 17.5 71 375-482 480-553 (592)
158 2pm9_A Protein WEB1, protein t 70.8 37 0.0012 34.3 12.3 61 216-294 218-282 (416)
159 3mmy_A MRNA export factor; mRN 70.7 70 0.0024 31.2 14.1 52 216-281 43-96 (368)
160 3dwl_C Actin-related protein 2 70.7 36 0.0012 34.0 12.2 54 216-282 104-157 (377)
161 3i2n_A WD repeat-containing pr 70.7 26 0.00088 34.4 10.9 55 216-282 213-270 (357)
162 2cn3_A Xyloglucanase, beta-1,4 70.3 56 0.0019 37.6 15.1 38 373-419 246-283 (737)
163 3zwl_B Eukaryotic translation 69.9 84 0.0029 30.6 17.1 50 216-282 36-85 (369)
164 2pm9_A Protein WEB1, protein t 69.9 37 0.0013 34.2 12.2 27 216-242 117-143 (416)
165 3c75_H MADH, methylamine dehyd 69.3 33 0.0011 37.3 12.2 52 221-294 81-137 (426)
166 3jrp_A Fusion protein of prote 69.2 90 0.0031 30.6 15.3 52 216-282 105-158 (379)
167 3jrp_A Fusion protein of prote 69.1 81 0.0028 30.9 14.2 64 216-293 151-227 (379)
168 3dw8_B Serine/threonine-protei 69.0 21 0.00073 36.5 10.2 57 216-282 181-237 (447)
169 3o4h_A Acylamino-acid-releasin 68.8 24 0.00081 38.5 11.0 26 216-242 153-182 (582)
170 1sq9_A Antiviral protein SKI8; 68.5 74 0.0025 31.8 14.0 25 216-242 190-214 (397)
171 3dw8_B Serine/threonine-protei 68.1 1.1E+02 0.0037 31.1 18.9 27 216-242 230-256 (447)
172 3pe7_A Oligogalacturonate lyas 67.6 1E+02 0.0035 30.7 14.9 25 218-242 41-67 (388)
173 4h5i_A Guanine nucleotide-exch 67.0 14 0.00048 38.1 8.3 61 216-296 273-333 (365)
174 3ei3_B DNA damage-binding prot 67.0 1E+02 0.0036 30.8 14.8 60 216-293 77-137 (383)
175 3mkq_A Coatomer beta'-subunit; 65.9 53 0.0018 36.8 13.4 50 216-282 17-66 (814)
176 2hes_X YDR267CP; beta-propelle 65.8 1.1E+02 0.0038 30.4 14.7 61 216-294 111-172 (330)
177 3k26_A Polycomb protein EED; W 64.5 73 0.0025 31.1 12.7 60 216-294 73-135 (366)
178 1erj_A Transcriptional repress 64.0 1E+02 0.0035 31.5 14.3 50 216-282 127-176 (393)
179 2ojh_A Uncharacterized protein 63.3 97 0.0033 28.8 17.2 40 372-419 218-258 (297)
180 2xyi_A Probable histone-bindin 62.2 67 0.0023 33.4 12.6 66 216-293 185-250 (430)
181 3dm0_A Maltose-binding peripla 62.1 1.1E+02 0.0036 34.2 14.9 76 204-294 371-449 (694)
182 1pgu_A Actin interacting prote 61.9 47 0.0016 35.5 11.5 50 216-281 492-541 (615)
183 2pbi_B Guanine nucleotide-bind 61.7 1.2E+02 0.0042 30.5 14.3 60 216-294 158-217 (354)
184 2xzm_R RACK1; ribosome, transl 61.5 76 0.0026 31.7 12.5 26 216-242 217-242 (343)
185 1r5m_A SIR4-interacting protei 61.5 67 0.0023 32.1 12.0 49 216-282 293-341 (425)
186 3vl1_A 26S proteasome regulato 60.3 93 0.0032 31.4 13.0 50 216-282 143-192 (420)
187 1r5m_A SIR4-interacting protei 60.1 81 0.0028 31.4 12.4 49 216-282 112-160 (425)
188 3lrv_A PRE-mRNA-splicing facto 60.1 32 0.0011 34.5 9.3 58 216-293 174-232 (343)
189 2j04_A TAU60, YPL007P, hypothe 59.8 1.2E+02 0.0039 34.7 14.6 25 216-241 89-113 (588)
190 1k8k_C P40, ARP2/3 complex 41 59.8 1E+02 0.0036 30.2 13.0 52 216-282 56-107 (372)
191 2ece_A 462AA long hypothetical 59.2 2.2E+02 0.0074 31.5 18.4 18 460-478 382-399 (462)
192 3zwl_B Eukaryotic translation 58.9 1.3E+02 0.0046 29.1 19.7 51 216-282 179-229 (369)
193 3q6k_A 43.2 kDa salivary prote 58.9 1.3E+02 0.0044 32.4 14.2 136 216-418 223-369 (381)
194 3nol_A Glutamine cyclotransfer 58.7 15 0.0005 37.8 6.5 63 218-292 177-242 (262)
195 3dwl_C Actin-related protein 2 58.6 54 0.0018 32.7 10.7 26 216-242 150-175 (377)
196 2vdu_B TRNA (guanine-N(7)-)-me 58.5 1E+02 0.0035 32.0 13.3 63 216-292 153-215 (450)
197 1nr0_A Actin interacting prote 58.2 50 0.0017 36.4 11.3 60 213-294 19-78 (611)
198 2oiz_A Aromatic amine dehydrog 57.4 41 0.0014 34.7 9.8 73 207-293 44-126 (361)
199 3amr_A 3-phytase; beta-propell 57.4 2E+02 0.0069 30.6 17.1 68 374-484 183-256 (355)
200 4aow_A Guanine nucleotide-bind 56.5 1.4E+02 0.0049 28.7 13.6 26 216-242 219-244 (340)
201 1vyh_C Platelet-activating fac 56.0 73 0.0025 33.0 11.5 58 216-294 112-169 (410)
202 3mkq_A Coatomer beta'-subunit; 55.9 2.5E+02 0.0086 31.2 19.8 50 216-282 59-108 (814)
203 2z3z_A Dipeptidyl aminopeptida 55.7 2.4E+02 0.0083 31.0 20.2 26 216-242 261-291 (706)
204 4aez_A CDC20, WD repeat-contai 55.0 1.8E+02 0.0061 29.6 14.2 49 216-282 263-314 (401)
205 3ei3_B DNA damage-binding prot 54.9 1.7E+02 0.0059 29.1 16.4 39 204-243 241-281 (383)
206 1vyh_C Platelet-activating fac 54.6 1.2E+02 0.0041 31.4 12.9 50 216-282 154-203 (410)
207 1tl2_A L10, protein (tachylect 54.4 12 0.00042 37.9 4.9 30 614-643 40-69 (236)
208 1xfd_A DIP, dipeptidyl aminope 54.3 1.5E+02 0.005 32.8 14.3 16 216-232 176-191 (723)
209 3gre_A Serine/threonine-protei 54.2 72 0.0025 32.7 11.0 26 216-242 115-140 (437)
210 3jro_A Fusion protein of prote 53.9 75 0.0026 36.3 12.1 62 216-294 13-74 (753)
211 4a11_B DNA excision repair pro 53.7 1.6E+02 0.0055 29.0 13.3 28 216-243 190-217 (408)
212 1mda_H Methylamine dehydrogena 53.6 31 0.0011 36.6 8.2 71 204-293 56-142 (368)
213 3frx_A Guanine nucleotide-bind 53.4 1.8E+02 0.006 28.7 15.3 63 216-293 21-83 (319)
214 4a5s_A Dipeptidyl peptidase 4 52.7 1.1E+02 0.0038 34.6 13.2 24 216-242 20-43 (740)
215 4ery_A WD repeat-containing pr 51.9 1.7E+02 0.0059 28.2 15.4 50 216-282 69-118 (312)
216 3mmy_A MRNA export factor; mRN 50.1 39 0.0013 33.1 7.8 58 216-294 277-334 (368)
217 4aow_A Guanine nucleotide-bind 49.2 95 0.0032 30.0 10.5 69 203-282 26-97 (340)
218 3sfz_A APAF-1, apoptotic pepti 49.0 1.3E+02 0.0045 35.8 13.5 50 216-282 619-668 (1249)
219 2oiz_A Aromatic amine dehydrog 48.0 41 0.0014 34.7 7.9 61 206-282 298-358 (361)
220 1k32_A Tricorn protease; prote 47.8 1.4E+02 0.0048 35.4 13.4 26 216-242 382-407 (1045)
221 3hxj_A Pyrrolo-quinoline quino 47.4 1.6E+02 0.0055 28.5 11.9 21 372-393 296-316 (330)
222 3sjl_D Methylamine dehydrogena 47.3 53 0.0018 35.3 8.8 69 206-293 71-155 (386)
223 4aez_A CDC20, WD repeat-contai 45.4 2.6E+02 0.0088 28.3 13.6 26 216-242 138-163 (401)
224 3sfz_A APAF-1, apoptotic pepti 44.8 1.8E+02 0.0062 34.6 13.9 59 216-293 661-719 (1249)
225 1yfq_A Cell cycle arrest prote 44.3 52 0.0018 32.0 7.7 53 216-282 15-67 (342)
226 2ecf_A Dipeptidyl peptidase IV 44.1 1.7E+02 0.0057 32.5 12.7 26 216-242 40-71 (741)
227 2pm7_B Protein transport prote 44.0 2.3E+02 0.008 27.4 14.8 66 216-294 149-226 (297)
228 2pm7_B Protein transport prote 44.0 2.3E+02 0.008 27.4 15.1 53 216-283 103-157 (297)
229 1pgu_A Actin interacting prote 43.2 1.8E+02 0.0062 30.8 12.3 26 216-243 22-47 (615)
230 3bg1_A Protein SEC13 homolog; 43.1 1.4E+02 0.0049 29.4 10.9 55 227-294 181-235 (316)
231 4a11_B DNA excision repair pro 43.1 2.3E+02 0.0078 27.9 12.4 59 216-291 103-161 (408)
232 3zwu_A Alkaline phosphatase PH 42.6 51 0.0018 37.6 8.2 101 375-481 388-496 (592)
233 2mad_H Methylamine dehydrogena 41.8 72 0.0025 33.3 8.7 34 207-241 60-103 (373)
234 2ece_A 462AA long hypothetical 40.5 69 0.0024 35.5 8.5 63 215-293 323-399 (462)
235 3nok_A Glutaminyl cyclase; bet 40.2 26 0.00089 36.1 4.8 60 218-292 186-252 (268)
236 2pbi_B Guanine nucleotide-bind 40.2 3E+02 0.01 27.6 16.0 59 216-294 200-259 (354)
237 2xzm_R RACK1; ribosome, transl 39.3 2.9E+02 0.01 27.3 15.2 57 216-282 25-87 (343)
238 2ynn_A Coatomer subunit beta'; 39.3 2.8E+02 0.0095 27.0 16.3 27 216-242 144-170 (304)
239 3dm0_A Maltose-binding peripla 38.8 4E+02 0.014 29.4 14.8 50 216-282 434-483 (694)
240 3jro_A Fusion protein of prote 38.7 2.9E+02 0.01 31.3 13.9 52 216-282 103-156 (753)
241 3odt_A Protein DOA1; ubiquitin 38.2 2.6E+02 0.0089 26.3 14.2 61 204-282 7-70 (313)
242 2vdu_B TRNA (guanine-N(7)-)-me 38.0 2.7E+02 0.0093 28.7 12.5 27 216-243 199-228 (450)
243 2xbg_A YCF48-like protein; pho 37.0 3.4E+02 0.012 27.3 13.2 57 216-293 166-222 (327)
244 3iz6_a 40S ribosomal protein R 36.3 1E+02 0.0036 31.3 8.8 26 216-242 70-95 (380)
245 3i2n_A WD repeat-containing pr 35.7 1.2E+02 0.004 29.5 8.7 69 207-291 10-85 (357)
246 2oaj_A Protein SNI1; WD40 repe 35.0 3E+02 0.01 32.3 13.4 26 216-242 492-517 (902)
247 1mda_H Methylamine dehydrogena 34.8 68 0.0023 34.0 7.2 59 206-282 306-367 (368)
248 3o4h_A Acylamino-acid-releasin 34.6 56 0.0019 35.5 6.7 26 216-242 198-225 (582)
249 3q6k_A 43.2 kDa salivary prote 33.2 2.8E+02 0.0094 29.7 11.7 32 371-419 275-306 (381)
250 2oaj_A Protein SNI1; WD40 repe 32.5 3E+02 0.01 32.3 12.9 26 216-242 21-46 (902)
251 3v9f_A Two-component system se 30.3 1.8E+02 0.0061 33.1 10.3 53 366-419 623-675 (781)
252 4gga_A P55CDC, cell division c 29.9 1.9E+02 0.0064 29.7 9.5 70 204-294 311-383 (420)
253 1yr2_A Prolyl oligopeptidase; 29.1 2.3E+02 0.0079 32.0 10.9 26 216-242 166-196 (741)
254 3mbr_X Glutamine cyclotransfer 27.0 1.2E+02 0.0041 30.5 7.1 63 218-292 155-221 (243)
255 1z68_A Fibroblast activation p 26.2 1.6E+02 0.0055 32.6 8.7 26 216-242 63-97 (719)
256 4a5s_A Dipeptidyl peptidase 4 25.3 7.5E+02 0.026 27.6 16.1 10 216-225 174-183 (740)
257 1k32_A Tricorn protease; prote 24.9 8E+02 0.027 28.7 14.9 25 616-640 609-634 (1045)
258 3gkj_A Niemann-PICK C1 protein 24.4 15 0.0005 37.2 -0.3 109 26-138 21-146 (232)
259 3bg1_A Protein SEC13 homolog; 22.9 2.3E+02 0.0079 27.8 8.4 55 216-282 216-273 (316)
260 3amr_A 3-phytase; beta-propell 22.8 2.3E+02 0.0079 30.2 8.6 26 216-242 183-208 (355)
261 2gop_A Trilobed protease; beta 22.5 5.3E+02 0.018 24.9 13.7 27 216-242 62-92 (347)
262 4e54_B DNA damage-binding prot 21.9 1.6E+02 0.0054 30.5 7.2 61 216-293 254-314 (435)
263 4ggc_A P55CDC, cell division c 21.6 4.3E+02 0.015 24.9 9.8 58 216-294 244-303 (318)
264 3v7d_B Cell division control p 21.0 6.6E+02 0.023 25.5 13.2 26 216-242 314-339 (464)
No 1
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=100.00 E-value=7.5e-67 Score=581.02 Aligned_cols=353 Identities=30% Similarity=0.582 Sum_probs=271.0
Q ss_pred CCCcEEEEEecCce--eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceee----CCCCcee
Q 005466 202 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHF----DTEFGLM 275 (695)
Q Consensus 202 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~----~~E~GLL 275 (695)
+.||++|+||+||. |+|+++|||++||||+||.|+||+++ + ++. . .+++++|+...+.. .+|+|||
T Consensus 1 ~~gf~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~-~-~g~--~----~~~~~~~~~~~~~~g~~~~~e~Gll 72 (463)
T 2wg3_C 1 HNCFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-P-EGE--I----FKEPYLDIHKLVQSGIKGGDERGLL 72 (463)
T ss_dssp -CCEEEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEEC-T-TSC--B----CSSCSEECTTTBCCCCSSSCCCSEE
T ss_pred CCceEEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEe-C-CCC--e----eeeeecCCcceeccCccccCCCcce
Confidence 35899999999998 99999999988999999999999985 2 232 1 24678888654432 3599999
Q ss_pred eeeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCC
Q 005466 276 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKP 355 (695)
Q Consensus 276 GiAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~ 355 (695)
||||||+|++|++|||+|+.....+. + .+.....+|+||+++.... ..+++
T Consensus 73 gia~~P~f~~n~~lYv~yt~~~~~~~----------------------~--~~~~~~~~v~r~~~~~~~~-----~~~d~ 123 (463)
T 2wg3_C 73 SLAFHPNYKKNGKLYVSYTTNQERWA----------------------I--GPHDHILRVVEYTVSRKNP-----HQVDL 123 (463)
T ss_dssp EEEECTTHHHHCEEEEEEEECCCSSC----------------------S--SSSCEEEEEEEEEBCTTCT-----TSBCG
T ss_pred eeEeCCCCcCCCEEEEEEeCCCCCcc----------------------c--CCcccceEEEEEEEcCCCC-----CccCC
Confidence 99999999999999999997533211 0 1123357999999864311 13445
Q ss_pred CCeEEEEEecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 005466 356 SEVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 435 (695)
Q Consensus 356 ~e~~~Il~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~Y 435 (695)
.++++|+++..+...|+|++|+|+| ||+|||++||+++..|+..++|++++++|||||||+|+. +.+++|
T Consensus 124 ~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~---------~~~~~y 193 (463)
T 2wg3_C 124 RTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD---------MCNVPY 193 (463)
T ss_dssp GGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC---------CSSCSC
T ss_pred CCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC---------cccccC
Confidence 5678888865567789999999999 999999999998776666689999999999999999994 234799
Q ss_pred CCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCC-----eEEEEEc-cCC-CceeEEEeecCCCCCcccccCCCcCC
Q 005466 436 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPS-----YFMCADV-GQD-VYEEVDIITRGGNYGWRLYEGPYLFT 508 (695)
Q Consensus 436 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~-----~l~~~Dv-G~d-~~EEIn~I~kG~NYGWp~~eG~~~~~ 508 (695)
+||+||||++.+++++||||+||||||||+||+.|++ .+|++|+ |++ ..||||+|++|+||||+
T Consensus 194 ~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~--------- 264 (463)
T 2wg3_C 194 SIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESE--------- 264 (463)
T ss_dssp BCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSC---------
T ss_pred cCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCC---------
Confidence 9999999999999999999999999999999999762 5788999 665 47999999999999993
Q ss_pred CCCCCCCCCCCCCCCCCCceeeccCCccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeE
Q 005466 509 PLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTT 588 (695)
Q Consensus 509 p~~~p~~~t~~~~~~~i~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~ 588 (695)
.|++.|.|+ .| .||+|++||+|++||+|+|.||++|+. ++||.+.+++.+ +.|..
T Consensus 265 -----------------~P~~~~~~~-----~g-~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~-~~~~~ 319 (463)
T 2wg3_C 265 -----------------PSLLEFKPF-----SN-GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVT-KQWQE 319 (463)
T ss_dssp -----------------CCCEECCC----------CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC------CCEE
T ss_pred -----------------CCeEEeeCC-----CC-ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCC-ceeeE
Confidence 489999874 33 899999999999999999999999996 899999876542 34544
Q ss_pred EEeeeecCCCCcccccccCCCCCCCCCccceEEEcCCCcEEEEeC---------CeEEEEecCCCC
Q 005466 589 SKIPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---------DGVYRVVRPSRC 645 (695)
Q Consensus 589 ~~i~f~c~~~~P~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---------~gIYRIv~ps~c 645 (695)
..+ +.++. ..+. ...++||++|++|+||+|||+++ ++||||++|+++
T Consensus 320 ~~~---~~g~~-~~~~------~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~ 375 (463)
T 2wg3_C 320 KPL---CLGTS-GSCR------GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRP 375 (463)
T ss_dssp EEE---CEEET-TSSC------SCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSC
T ss_pred EEe---ecCCc-cccc------ccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccc
Confidence 333 11111 1111 12368999999999999999995 359999998875
No 2
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=100.00 E-value=1.6e-56 Score=479.18 Aligned_cols=341 Identities=22% Similarity=0.373 Sum_probs=269.6
Q ss_pred CCCCCcEEEEEecCce--eeEEEcCCCCce-EEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceee
Q 005466 200 NPPQGLCLEKIGNGSY--LNMVAHPDGSNR-AFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 276 (695)
Q Consensus 200 ~~p~G~~le~va~Gl~--~~m~~~pDGs~R-lfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLG 276 (695)
+.|+||++|+|+++|. +.|++.||| | |||+|+.|+|++++ + ++. . .+++.++. .|...+++|++|
T Consensus 3 ~~p~g~~~~~va~~l~~P~~i~~~pdG--~~l~V~e~~G~i~~~~-~-~g~--~-----~~~~~~~~-~v~~~g~~g~~g 70 (353)
T 2g8s_A 3 MAPATVNVEVLQDKLDHPWALAFLPDN--HGMLITLRGGELRHWQ-A-GKG--L-----SAPLSGVP-DVWAHGQGGLLD 70 (353)
T ss_dssp ---CCSEEEEEEEEESSEEEEEECSTT--CCEEEEETTTEEEEEE-T-TTE--E-----CCCCBSCC-CCCCSTTCSEEE
T ss_pred CCCCCcEEEEEECCCCCcEEEEEcCCC--CEEEEEeCCceEEEEe-C-CCc--e-----eeEecCCc-ccccCCCCCcee
Confidence 4588999999999988 999999999 7 99999999999986 3 232 1 23555653 566678999999
Q ss_pred eeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 005466 277 MAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 356 (695)
Q Consensus 277 iAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~ 356 (695)
|||||+|++|++|||+|+..... | ....+|+||+.+... ....
T Consensus 71 ia~~pdf~~~g~lYv~~~~~~~~-------------------------g----~~~~~v~r~~~~~~~--------~~~~ 113 (353)
T 2g8s_A 71 VVLAPDFAQSRRIWLSYSEVGDD-------------------------G----KAGTAVGYGRLSDDL--------SKVT 113 (353)
T ss_dssp EEECTTHHHHCEEEEEEEEECSS-------------------------S----CEEEEEEEEEECTTS--------SBEE
T ss_pred EEECCCCCCCCEEEEEEeCCCCC-------------------------C----CceeEEEEEEECCCC--------CCCC
Confidence 99999999999999999864211 1 013689999986432 1123
Q ss_pred CeEEEEEecCCC---CCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCC
Q 005466 357 EVRRIFTMGLSF---NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWG 433 (695)
Q Consensus 357 e~~~Il~~~~P~---~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g 433 (695)
+.++|++ .+|. ..|++++|+|+| ||+|||++||.++. ..+||++++.|||+||++||
T Consensus 114 ~~~~i~~-~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~----~~~q~~~~~~g~I~ri~~dG-------------- 173 (353)
T 2g8s_A 114 DFRTVFR-QMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQR----PTAQDLDKLQGKLVRLTDQG-------------- 173 (353)
T ss_dssp EEEEEEE-CSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCG----GGGGCTTSCTTEEEEEETTS--------------
T ss_pred ceEEEEE-ECCCCCCCcccCccEEECC-CCcEEEEECCCCCC----CccCCCCCCCeEEEEECCCC--------------
Confidence 4566765 5563 579999999999 99999999998763 37899999999999999998
Q ss_pred CcCCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCC
Q 005466 434 SYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETP 513 (695)
Q Consensus 434 ~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p 513 (695)
+||+||||++..+..+||||+||||||+++||+.++ +||++|+|++..||||+|++|+|||||.+++...|++...+
T Consensus 174 --~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g-~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 174 --EIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSN-ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp --CCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTT-EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred --CCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCC-CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence 799999999988889999999999999999999777 69999999999999999999999999999987766543111
Q ss_pred CCCCCCCCCCCCCceeeccCCccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeee
Q 005466 514 GGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPF 593 (695)
Q Consensus 514 ~~~t~~~~~~~i~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f 593 (695)
... ......++.|++.|.|. .|++|++||+|.+||+|+|.||++|+..++||.+..+ .|+.... ..|
T Consensus 251 ~~~-~~~~~~~~~P~~~~~~~--------~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~---~~~~~~~-~~~ 317 (353)
T 2g8s_A 251 EAK-GEIVAGTEQPVFYWKDS--------PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVN---GDKVTED-GRI 317 (353)
T ss_dssp TCC-BSSCTTSCCCSEEESSC--------CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEE---TTEEEEE-EEE
T ss_pred ccc-CCCCCCccCCeEEeCCC--------cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeC---CCeEeee-EEc
Confidence 100 01112468899999653 7999999999999999999999999999999999875 2322211 111
Q ss_pred ecCCCCcccccccCCCCCCCCCccceEEEcCCCcEEEEeC---CeEEEEec
Q 005466 594 SCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---DGVYRVVR 641 (695)
Q Consensus 594 ~c~~~~P~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---~gIYRIv~ 641 (695)
+. ...+||+++++++||+|||+++ +.||||++
T Consensus 318 ------------~~----~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 318 ------------LT----DRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp ------------SG----GGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred ------------cc----CCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 11 1246999999999999999975 35999985
No 3
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=100.00 E-value=8.8e-54 Score=474.27 Aligned_cols=356 Identities=23% Similarity=0.393 Sum_probs=259.5
Q ss_pred CCCCCcEEEEEecCce--eeEEEcCCCCceEEEEeeCc-eEEEEEccCCCCCceeeecCCCCCcCCcCcee-eCCCCcee
Q 005466 200 NPPQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEG-KIWLATIPEQGLGETMELDASSPFADLTDEVH-FDTEFGLM 275 (695)
Q Consensus 200 ~~p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G-~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~-~~~E~GLL 275 (695)
+.|+||++|+|++||. |+|++.||| ||||+|+.| +|++++ +++|.. .+++++...+. ..+|+|||
T Consensus 12 ~~~~gf~~~~~a~~l~~P~~~a~~pdG--~l~V~e~~gg~I~~~~-~~~g~~--------~~~~~~~~~~~~~~g~~Gll 80 (454)
T 1cru_A 12 AKSENFDKKVILSNLNKPHALLWGPDN--QIWLTERATGKILRVN-PESGSV--------KTVFQVPEIVNDADGQNGLL 80 (454)
T ss_dssp CCCTTSCEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCCE--------EEEEECTTCCCCTTSSCSEE
T ss_pred CCCCCeEEEEEECCCCCceEEEEcCCC--cEEEEEcCCCEEEEEE-CCCCcE--------eEEecCCccccccCCCCcee
Confidence 4578999999999998 999999999 899999986 799875 333321 12334432221 24799999
Q ss_pred eeeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCC
Q 005466 276 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKP 355 (695)
Q Consensus 276 GiAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~ 355 (695)
||||||+|++|++|||+|+....... +. . .....+|+||+.+... .+.
T Consensus 81 gia~~Pdf~~~g~lYv~~s~~~~~~~---------------------~~-~--~~~~~~v~r~~~~~~~--------~~~ 128 (454)
T 1cru_A 81 GFAFHPDFKNNPYIYISGTFKNPKST---------------------DK-E--LPNQTIIRRYTYNKST--------DTL 128 (454)
T ss_dssp EEEECTTTTTSCEEEEEEEEECTTC-----------------------C-C--SCEEEEEEEEEEETTT--------TEE
T ss_pred EEEECCCcCcCCEEEEEEeccccCCC---------------------cc-c--cccccEEEEEEECCCC--------CCc
Confidence 99999999999999999996322110 00 0 0114699999986431 112
Q ss_pred CCeEEEEEecCCC-CCccccceEEcCCCCeEEEEecCCCCCC-----Ccc----------CccccCCCCCeeEEEEecCC
Q 005466 356 SEVRRIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTA-----DPY----------NFSQNKKSLLGKITRLDVDN 419 (695)
Q Consensus 356 ~e~~~Il~~~~P~-~~H~GG~L~FGP~DG~LYi~~GDgg~~~-----DP~----------~~aQn~ssl~GKILRIdvDg 419 (695)
.++++|++ .+|. ..|++++|+|+| ||+|||++||+++.. +|. .++|++.++.||||||++||
T Consensus 129 ~~~~~i~~-~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG 206 (454)
T 1cru_A 129 EKPVDLLA-GLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDG 206 (454)
T ss_dssp EEEEEEEE-EECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTS
T ss_pred CCcEEEEE-cCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCC
Confidence 34566775 4554 469999999999 999999999987531 111 14899999999999999999
Q ss_pred CCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcc
Q 005466 420 IPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWR 499 (695)
Q Consensus 420 ~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp 499 (695)
+||+||||++ ++++||||+|||||+|++||+ +| +||++|+|++..||||+|++|+|||||
T Consensus 207 ----------------~ip~~Npf~~--~~~~ei~a~G~RNp~gla~dp-~G-~L~~~d~g~~~~dein~i~~G~nYGWP 266 (454)
T 1cru_A 207 ----------------SIPKDNPSFN--GVVSHIYTLGHRNPQGLAFTP-NG-KLLQSEQGPNSDDEINLIVKGGNYGWP 266 (454)
T ss_dssp ----------------CCCTTCCEET--TEECSEEEBCCSEEEEEEECT-TS-CEEEEEECSSSCEEEEECCTTCBCCTT
T ss_pred ----------------CCCCCCCCCC--CCcceEEEECCCCcceEEECC-CC-CEEEEecCCCCCeEEEEecCCCCCCCC
Confidence 7999999985 578999999999999999999 56 599999999999999999999999999
Q ss_pred cccCCCc---------------------CCCCCCCCCCC-----CCCCCCCCCceeecc-------CCccC------CCC
Q 005466 500 LYEGPYL---------------------FTPLETPGGIT-----PLNSVSPIFPVLGYN-------HSEVN------KKE 540 (695)
Q Consensus 500 ~~eG~~~---------------------~~p~~~p~~~t-----~~~~~~~i~Pi~~y~-------H~~~~------~~~ 540 (695)
.++|... |++...+.+.. ......++.|++.|. |.+.. ...
T Consensus 267 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~p~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~G~~~~~~~ 346 (454)
T 1cru_A 267 NVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICW 346 (454)
T ss_dssp TCSSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGS
T ss_pred ceecCcccCccccccccccccccccccccCCcccCccccccccccccCCCcCCCceeccccccccccccccccccccccc
Confidence 9987421 11111010000 000124678988652 22200 013
Q ss_pred CCcccccceeecCC--CCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCCCccc
Q 005466 541 GSASITGGYFYRSM--TDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIY 618 (695)
Q Consensus 541 Gs~S~tGg~vYrG~--~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~gri~ 618 (695)
++.|++|+.||+|. .+|+|+|.+|++++..++|+.+..++++. .++.....| +. .++||+
T Consensus 347 ~~~ap~G~~fy~g~~~~~~~~~g~lfv~~~~~~~i~~v~l~~~g~-~~~~~~~~~------------~~-----~~~R~~ 408 (454)
T 1cru_A 347 PTVAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYS-TTYDDAVPM------------FK-----SNNRYR 408 (454)
T ss_dssp SCCCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTSS-SEEEEEEEE------------SC-----CSSCEE
T ss_pred CccCcceeEEeCCCCccCcccCCcEEEeecCCCEEEEEEECCCCC-eeeeeeeee------------cc-----cCCCce
Confidence 57899999999998 56789999999999999999998764321 243222222 11 257999
Q ss_pred eEEEcCCCc-EEEEeCC--eEEE
Q 005466 619 SFGEDNRKD-IFILTSD--GVYR 638 (695)
Q Consensus 619 sf~ed~dGe-LYvlts~--gIYR 638 (695)
++.+++||. |||++++ .|||
T Consensus 409 dv~~gpDG~~Lyv~~d~~G~i~~ 431 (454)
T 1cru_A 409 DVIASPDGNVLYVLTDTAGNVQK 431 (454)
T ss_dssp EEEECTTSSCEEEEECSSCCEEC
T ss_pred eEEECCCCCEEEEEECCCCCCcc
Confidence 999999998 9999973 2554
No 4
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=100.00 E-value=1.8e-53 Score=457.86 Aligned_cols=311 Identities=24% Similarity=0.421 Sum_probs=245.5
Q ss_pred CCcEEEEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeee
Q 005466 203 QGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAF 279 (695)
Q Consensus 203 ~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAf 279 (695)
+...+|+|++||. |+|+++||| ||||+|| .|+|++++ ++++..+ ++.++ +.|...+|+|||||||
T Consensus 20 ~~~~~~~va~gL~~P~~ia~~pdG--~llVter~~G~I~~v~-~~~g~~~--------~v~~~-~~v~~~g~~GllGia~ 87 (347)
T 3das_A 20 SVKVLRTVATGLNSPWGLAPLPGG--DLLVSSRDEATITRVD-AKTGRKT--------ELGEV-PGVSPSGEGGLLGIAL 87 (347)
T ss_dssp CEEEEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCCEE--------EEEEC-TTCCCBTTBSEEEEEE
T ss_pred CCceeEEeecCCCCceEEEEcCCC--cEEEEEecCCEEEEEE-CCCCcEe--------eeccc-CceeecCCCCceeeEe
Confidence 4689999999998 999999999 7999999 99999985 3333211 12222 3567789999999999
Q ss_pred CCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeE
Q 005466 280 HPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVR 359 (695)
Q Consensus 280 hPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~ 359 (695)
||+|++|++|||+|+... ..+|+||+.++... ...+..+.+
T Consensus 88 ~Pdf~~~g~lYv~yt~~~----------------------------------~~~v~R~~~~~~~~-----~~~~~~~~~ 128 (347)
T 3das_A 88 SPDYASDHMVYAYFTSAS----------------------------------DNRIVRMLYDEKKP-----SGEQLGAPD 128 (347)
T ss_dssp CTTHHHHCEEEEEEECSS----------------------------------SEEEEEEEBCTTSC-----TTCCBCCCE
T ss_pred ccccccCCEEEEEEecCC----------------------------------CCEEEEEEeCCCCc-----ccccCCCcE
Confidence 999999999999998531 14899999864311 012344667
Q ss_pred EEEEecCCC-CCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCC
Q 005466 360 RIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIP 438 (695)
Q Consensus 360 ~Il~~~~P~-~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP 438 (695)
+|++ .+|. ..|++++|+|+| ||+|||++||.++. ..+||++++.|||+||++|| +||
T Consensus 129 ~i~~-~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~----~~~qd~~~~~G~IlRi~~dG----------------~ip 186 (347)
T 3das_A 129 TVFR-GIPKGVIHNGGRIAFGP-DKMLYAGTGESGDT----GLSQDRKSLGGKILRMTPDG----------------EPA 186 (347)
T ss_dssp EEEE-EECCCSSCCCCCEEECT-TSCEEEECBCTTCG----GGTTCTTCSTTCEEEECTTS----------------SBC
T ss_pred EEEE-cCCCCCCccCccccCCC-CCCEEEEECCCCCC----ccccCCCCCCCEEEEEeCCC----------------Ccc
Confidence 7886 4554 579999999999 99999999998764 46899999999999999999 799
Q ss_pred CCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCCCCCCC
Q 005466 439 KDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITP 518 (695)
Q Consensus 439 ~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p~~~t~ 518 (695)
+||||.+ .||||+|||||||++||+ +| .||++|+|++..||||+|++|+|||||+++|...
T Consensus 187 ~~nPf~~-----~~i~a~G~RNp~Gla~dp-~G-~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~------------ 247 (347)
T 3das_A 187 PGNPFPG-----SPVYSYGHRNVQGLAWDD-KQ-RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGG------------ 247 (347)
T ss_dssp TTCSSTT-----CCEEEBCCSBCCEEEECT-TC-CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCC------------
T ss_pred CCCCCCC-----CeEEeeCCCCcceEEECC-CC-CEEEEecCCCCCceeeEEcCCCEecCCcccCCCC------------
Confidence 9999974 589999999999999999 56 5999999999999999999999999999988521
Q ss_pred CCCCCCCCceeeccCCccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCC
Q 005466 519 LNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARD 598 (695)
Q Consensus 519 ~~~~~~i~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~ 598 (695)
...++.|++.|.|. +.|++|+.||+| ..|++++..++||.+..+.. +. + .
T Consensus 248 --~~~~~~P~~~~~~~-------~~ap~G~~~~~g--------~~~~~~l~~~~l~~v~~~~~--~~-----~-----~- 297 (347)
T 3das_A 248 --GSGFHDPVAQWSTD-------EASPSGIAYAEG--------SVWMAGLRGERLWRIPLKGT--AA-----A-----A- 297 (347)
T ss_dssp --CTTCCCCSEEECTT-------TCCEEEEEEETT--------EEEEEESTTCSEEEEEEETT--EE-----S-----S-
T ss_pred --CccccCCcEecCCC-------CCCCcceEEEcC--------ceeeccccCCEEEEEEecCC--ce-----e-----c-
Confidence 01378899999753 369999999975 56667777788998876432 10 0 0
Q ss_pred CcccccccCCCCCCCCCccceEEEcCCCcEEEEeCC------------eEEEEec
Q 005466 599 SPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTSD------------GVYRVVR 641 (695)
Q Consensus 599 ~P~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts~------------gIYRIv~ 641 (695)
.+ ..++.+ .++||+++.+++||.|||++++ +|+||+.
T Consensus 298 ~~--e~~l~~----~~gR~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 298 DP--QAFLEG----EYGRLRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEV 346 (347)
T ss_dssp CC--EEESTT----TSSCEEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred ce--EEeecC----CCCCccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeC
Confidence 00 012232 3689999999999999999861 5999974
No 5
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=100.00 E-value=8.7e-52 Score=443.36 Aligned_cols=324 Identities=26% Similarity=0.421 Sum_probs=257.3
Q ss_pred CCCCCcEEEEEecCce--eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeee
Q 005466 200 NPPQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGM 277 (695)
Q Consensus 200 ~~p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGi 277 (695)
+.+.+|++|+|+++|. +.|++.||| ||||+|+.|+|++++ .+|. + ++.++. |...++.|++||
T Consensus 14 ~~~~~~~~~~va~~l~~P~~ia~~pdG--~l~V~e~~g~I~~~d--~~G~-~--------~~~~~~--v~~~g~~g~~gi 78 (354)
T 3a9g_A 14 SEEWKFKISEVASDLEVPWSIAPLGGG--RYLVTERPGRLVLIS--PSGK-K--------LVASFD--VANVGEAGLLGL 78 (354)
T ss_dssp --CCCEEEEEEECSCSCEEEEEEEETT--EEEEEETTTEEEEEC--SSCE-E--------EEEECC--CCCSTTCSEEEE
T ss_pred CCCCCeEEEEEeCCCCCCeEEEEcCCC--eEEEEeCCCEEEEEe--CCCc-e--------Eeeccc--eeecCCCceeeE
Confidence 4467999999999998 999999999 899999999999884 2332 2 223442 455678999999
Q ss_pred eeCCCCCCCCEEEEEEee-cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 005466 278 AFHPNFAKNGRFFASFNC-DKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 356 (695)
Q Consensus 278 AfhPdF~~Ng~~YvsYs~-~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~ 356 (695)
||||+|++||+|||+|+. .... ....+|.||+.++.. ....
T Consensus 79 a~~pdf~~~g~lyv~~~~~~~~~------------------------------~~~~~v~r~~~~~~~--------~~~~ 120 (354)
T 3a9g_A 79 ALHPEFPKKSWVYLYASYFAEGG------------------------------HIRNRVIRGRLDGST--------FKLK 120 (354)
T ss_dssp EECTTTTTSCEEEEEEEEECGGG------------------------------CEEEEEEEEEECSSS--------CCEE
T ss_pred EeCCCCCcCCEEEEEEeccCCCC------------------------------CcceEEEEEEECCCC--------cCcC
Confidence 999999999999999985 2110 013589999975431 1223
Q ss_pred CeEEEEEecCC-CCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 005466 357 EVRRIFTMGLS-FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 435 (695)
Q Consensus 357 e~~~Il~~~~P-~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~Y 435 (695)
+.++|++ ++| ...|++++|+|+| ||+|||++||.++. ..+|++.++.|||+||++||
T Consensus 121 ~~~~l~~-~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~----~~~~d~~~~~G~I~ri~~dG---------------- 178 (354)
T 3a9g_A 121 EVKTLID-GIPGAYIHNGGRIRFGP-DGMLYITTGDAADP----RLAQDLSSLAGKILRVDEEG---------------- 178 (354)
T ss_dssp EEEEEEE-EEECCSSCCCCCEEECT-TSCEEEECCCTTCG----GGGTCTTCCSSEEEEECTTS----------------
T ss_pred ccEEEEE-cCCCCCCcCCceEEECC-CCcEEEEECCCCCC----ccccCCCCCCeEEEEEcCCC----------------
Confidence 4566665 344 3579999999999 99999999997643 46899999999999999998
Q ss_pred CCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCCCC
Q 005466 436 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGG 515 (695)
Q Consensus 436 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p~~ 515 (695)
+||.||||. .+||||+|||||+|++||+.++ +||++|+|++..||||+|++|+|||||.++|....
T Consensus 179 ~~p~~npf~-----~~~i~a~G~rnp~Gla~d~~~g-~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~-------- 244 (354)
T 3a9g_A 179 RPPADNPFP-----NSPIWSYGHRNPQGIDWHRASG-VMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGR-------- 244 (354)
T ss_dssp CCCTTSSST-----TCCEEEECCSCCCEEEECTTTC-CEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCC--------
T ss_pred CCCCCCCCC-----CCcEEEEccCCcceEEEeCCCC-CEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCC--------
Confidence 799999995 5799999999999999999777 59999999999999999999999999999875311
Q ss_pred CCCCCCCCCCCceeeccCCccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeec
Q 005466 516 ITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSC 595 (695)
Q Consensus 516 ~t~~~~~~~i~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c 595 (695)
..++.|++.|.+ ++.|++|+.||+|++||+++|.+|++|+..++||.+..+. .|..... ..|
T Consensus 245 ------~~~~~p~~~~~~-------~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~--~g~~~~~-~~~-- 306 (354)
T 3a9g_A 245 ------GEFVDPVIDTGS-------ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD--NMEVRKI-STF-- 306 (354)
T ss_dssp ------TTSCCCSEECTT-------CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG--GGCEEEE-EEE--
T ss_pred ------CCCcCCEeecCC-------CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC--CCcccce-eee--
Confidence 125789999953 2479999999999999999999999999999999998753 2332211 111
Q ss_pred CCCCcccccccCCCCCCCCCccceEEEcCCCcEEEEeC---C---------eEEEEecCCC
Q 005466 596 ARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---D---------GVYRVVRPSR 644 (695)
Q Consensus 596 ~~~~P~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---~---------gIYRIv~ps~ 644 (695)
+.+ ..+||+++++++||+|||+++ + +||||.+...
T Consensus 307 ----------~~~----~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g~ 353 (354)
T 3a9g_A 307 ----------FKN----VFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQH 353 (354)
T ss_dssp ----------CTT----TSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETTC
T ss_pred ----------ccC----CCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCCC
Confidence 121 257999999999999999985 2 6999997543
No 6
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=4e-47 Score=405.92 Aligned_cols=312 Identities=27% Similarity=0.432 Sum_probs=245.1
Q ss_pred CCCcEEEEEecCce--eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeee
Q 005466 202 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAF 279 (695)
Q Consensus 202 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAf 279 (695)
+..+.+|+|+++|. +.|++.||| |+||+|+.|+|++++ ++.. +++.++. |...++.|++||||
T Consensus 18 ~~~~~~~~va~~l~~P~~ia~~pdG--~l~V~e~~g~I~~i~---~g~~--------~~~~~~~--v~~~g~~~p~gia~ 82 (352)
T 2ism_A 18 GQGLRVEEVVGGLEVPWALAFLPDG--GMLIAERPGRIRLFR---EGRL--------STYAELS--VYHRGESGLLGLAL 82 (352)
T ss_dssp --CCCEEEEECCCSCEEEEEECTTS--CEEEEETTTEEEEEE---TTEE--------EEEEECC--CCCSTTCSEEEEEE
T ss_pred cCCcEEEEEECCCCCceEEEEcCCC--eEEEEeCCCeEEEEE---CCCc--------cEeecce--EeecCCCCceeEEE
Confidence 34689999999997 999999999 799999999999985 2332 2334443 55677899999999
Q ss_pred CCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeE
Q 005466 280 HPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVR 359 (695)
Q Consensus 280 hPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~ 359 (695)
||+|++|++|||+|+.... ....+|.||+.++. ...+.+
T Consensus 83 ~pdf~~~g~lYv~~~~~~~-------------------------------~~~~~v~r~~~~~~----------~~~~~~ 121 (352)
T 2ism_A 83 HPRFPQEPYVYAYRTVAEG-------------------------------GLRNQVVRLRHLGE----------RGVLDR 121 (352)
T ss_dssp CTTTTTSCEEEEEEEECTT-------------------------------SSEEEEEEEEECSS----------CEEEEE
T ss_pred CCCCCCCCEEEEEEecCCC-------------------------------CCccEEEEEEeCCC----------CcCceE
Confidence 9999999999999985321 01358999987532 122455
Q ss_pred EEEEecCC---CCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcC
Q 005466 360 RIFTMGLS---FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYS 436 (695)
Q Consensus 360 ~Il~~~~P---~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~Ys 436 (695)
+|++ ++| ...|+++.|.|+| ||+|||++||.++. ..+|+..++.|||+||++|| +
T Consensus 122 ~l~~-~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~----~~~~d~~~~~g~I~ri~~dG----------------~ 179 (352)
T 2ism_A 122 VVLD-GIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYER----ELAQDLASLGGKILRLTPEG----------------E 179 (352)
T ss_dssp EEEE-EECCCTTCCCCCCCEEECT-TSCEEEECCCTTCG----GGGGCTTCSSSEEEEECTTS----------------S
T ss_pred EEEE-eCCCCCCCCcCCceEEECC-CCCEEEEECCCCCC----ccccCCCCCceEEEEEcCCC----------------C
Confidence 6665 455 4579999999999 99999999997653 46899999999999999998 7
Q ss_pred CCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCC-----ceeEEEeecCCCCCcccccCCCcCCCCC
Q 005466 437 IPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV-----YEEVDIITRGGNYGWRLYEGPYLFTPLE 511 (695)
Q Consensus 437 IP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~-----~EEIn~I~kG~NYGWp~~eG~~~~~p~~ 511 (695)
||+||||++..+.++||||+|||||++++||+.++ +||++|+|++. +||||+|++|+|||||.++|....
T Consensus 180 ~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g-~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~---- 254 (352)
T 2ism_A 180 PAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTG-ELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND---- 254 (352)
T ss_dssp BCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTC-CEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC----
T ss_pred CCCCCcccCCCCCCccEEEEcCCCcccEEEECCCC-CEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC----
Confidence 99999999988889999999999999999999777 59999999998 899999999999999999884210
Q ss_pred CCCCCCCCCCCCCCCceeeccCCccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEE-
Q 005466 512 TPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSK- 590 (695)
Q Consensus 512 ~p~~~t~~~~~~~i~Pi~~y~H~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~- 590 (695)
..++.|++.|.+ +.+|+|+.||+ |.+|++|+..++||.+..+..+ ..|+...
T Consensus 255 ----------~~~~~p~~~~~~--------~~ap~G~~~~~--------G~l~v~~~~~~~v~~v~~~~~~-~~~~~~~~ 307 (352)
T 2ism_A 255 ----------PRYRDPLYFWPQ--------GFPPGNLAFFR--------GDLYVAGLRGQALLRLVLEGER-GRWRVLRV 307 (352)
T ss_dssp ----------TTSCCCSEECTT--------CCCEEEEEEET--------TEEEEEETTTTEEEEEEEEEET-TEEEEEEE
T ss_pred ----------CCCcCCeEecCC--------CCCCcceEEEC--------CEEEEEECCCCEEEEEEECCCC-cceeecch
Confidence 125689999943 37999999965 4678999999999998765332 1221111
Q ss_pred eeeecCCCCcccccccCCCCCCCCCccceEEEcCCCcEEEEeC---C---------eEEEEe
Q 005466 591 IPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---D---------GVYRVV 640 (695)
Q Consensus 591 i~f~c~~~~P~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---~---------gIYRIv 640 (695)
.. ++ ..++||+++++++||+|||+++ + +||||+
T Consensus 308 ~~------------~~-----~~~~rp~~v~~~pdG~lyv~~~~~~g~g~~~~~~~~i~ri~ 352 (352)
T 2ism_A 308 ET------------AL-----SGFGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL 352 (352)
T ss_dssp EE------------EE-----ESSCCEEEEEECTTSCEEEEECSTTTTSCCCTTCSCEEEEC
T ss_pred he------------ec-----ccCCCeeEEEECCCCcEEEEEeCCCCCCCCCCCCCEEEEeC
Confidence 11 11 1257999999999999999985 2 599985
No 7
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.45 E-value=0.00017 Score=72.18 Aligned_cols=269 Identities=12% Similarity=0.080 Sum_probs=145.7
Q ss_pred EEEEecCce--eeEEEcCCCCceEEEE--------eeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceee
Q 005466 207 LEKIGNGSY--LNMVAHPDGSNRAFFS--------NQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 276 (695)
Q Consensus 207 le~va~Gl~--~~m~~~pDGs~RlfV~--------Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLG 276 (695)
.++|+.++. .++++.+|| ++||+ ...|.|++++ ++.+. ... +.. +.. ........+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~~i~~~d-~~~g~--~~~------~~~--~~~-~~~~~~~~~ 75 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFDKNG--DFYIVAPEVEVNGKPAGEILRID-LKTGK--KTV------ICK--PEV-NGYGGIPAG 75 (314)
T ss_dssp CEEEECCCTTCEEEEECTTS--CEEEEETTCEETTEECCEEEEEC-TTTCC--EEE------EEC--CEE-TTEECCEEE
T ss_pred HhhhhccCCCccCceECCCC--CEEEEEeccccCCCCCCEEEEEe-CCCCc--EEE------EEe--ccc-CCCCCCCce
Confidence 466788876 789999998 79999 4678899885 33332 111 100 000 001245789
Q ss_pred eeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 005466 277 MAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 356 (695)
Q Consensus 277 iAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~ 356 (695)
++++|+ +|++||.-.. ..|.+|..+ .
T Consensus 76 i~~~~~---~g~l~v~~~~-------------------------------------~~l~~~d~~-g------------- 101 (314)
T 1pjx_A 76 CQCDRD---ANQLFVADMR-------------------------------------LGLLVVQTD-G------------- 101 (314)
T ss_dssp EEECSS---SSEEEEEETT-------------------------------------TEEEEEETT-S-------------
T ss_pred EEEecC---CCcEEEEECC-------------------------------------CCEEEEeCC-C-------------
Confidence 999973 3889886421 145556532 1
Q ss_pred CeEEE-EEecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 005466 357 EVRRI-FTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 435 (695)
Q Consensus 357 e~~~I-l~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~Y 435 (695)
+.+.+ ...........-..|.|++ ||.|||+....+.. +.+.........+.|+|++.++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~g~--------------- 163 (314)
T 1pjx_A 102 TFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVA--PADYTRSMQEKFGSIYCFTTDGQ--------------- 163 (314)
T ss_dssp CEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCT--TSCCCBTTSSSCEEEEEECTTSC---------------
T ss_pred CEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccc--cccccccccCCCCeEEEECCCCC---------------
Confidence 12222 1100000112234799999 99999987543211 10111122345689999987751
Q ss_pred CCCCCCCCCCCCCCCCeEEEeccccceeeeec----CCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCC
Q 005466 436 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFD----SDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLE 511 (695)
Q Consensus 436 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD----~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~ 511 (695)
.+.+..++..|.+++|+ +.. ..||++|.+.+..-.+++-..|. +.
T Consensus 164 ---------------~~~~~~~~~~~~~i~~~~~~d~dg-~~l~v~~~~~~~i~~~~~~~~g~---~~------------ 212 (314)
T 1pjx_A 164 ---------------MIQVDTAFQFPNGIAVRHMNDGRP-YQLIVAETPTKKLWSYDIKGPAK---IE------------ 212 (314)
T ss_dssp ---------------EEEEEEEESSEEEEEEEECTTSCE-EEEEEEETTTTEEEEEEEEETTE---EE------------
T ss_pred ---------------EEEeccCCCCcceEEEecccCCCC-CEEEEEECCCCeEEEEECCCCCc---cc------------
Confidence 13344567788999999 764 36999987654322222111110 00
Q ss_pred CCCCCCCCCCCCCCCceeeccCCccCCCCCC-cccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEE
Q 005466 512 TPGGITPLNSVSPIFPVLGYNHSEVNKKEGS-ASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSK 590 (695)
Q Consensus 512 ~p~~~t~~~~~~~i~Pi~~y~H~~~~~~~Gs-~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~ 590 (695)
....+..+.. .. ..+.++.+- -.|.+++++...+.|..+. ++ +|+... .
T Consensus 213 ------------~~~~~~~~~~-------~~~~~p~~i~~d-------~~G~l~v~~~~~~~i~~~d--~~-~g~~~~-~ 262 (314)
T 1pjx_A 213 ------------NKKVWGHIPG-------THEGGADGMDFD-------EDNNLLVANWGSSHIEVFG--PD-GGQPKM-R 262 (314)
T ss_dssp ------------EEEEEEECCC-------CSSCEEEEEEEB-------TTCCEEEEEETTTEEEEEC--TT-CBSCSE-E
T ss_pred ------------cceEEEECCC-------CCCCCCCceEEC-------CCCCEEEEEcCCCEEEEEc--CC-CCcEeE-E
Confidence 0000111110 00 123343331 1478888888777777764 22 233221 1
Q ss_pred eeeecCCCCcccccccCCCCCCCCCccceEEEcCCCc-EEEEeCC--eEEEEec
Q 005466 591 IPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKD-IFILTSD--GVYRVVR 641 (695)
Q Consensus 591 i~f~c~~~~P~~c~~~~g~~~~~~gri~sf~ed~dGe-LYvlts~--gIYRIv~ 641 (695)
+. . + ...+.+++.++||. ||+.+.+ +|+++..
T Consensus 263 ~~--------~-----~------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 263 IR--------C-----P------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EE--------C-----S------SSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred Ee--------C-----C------CCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 10 0 0 14678999999999 9998865 8999864
No 8
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.45 E-value=0.00014 Score=73.10 Aligned_cols=176 Identities=15% Similarity=0.156 Sum_probs=101.1
Q ss_pred CCcEEEEEecCce--eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeee
Q 005466 203 QGLCLEKIGNGSY--LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAF 279 (695)
Q Consensus 203 ~G~~le~va~Gl~--~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAf 279 (695)
++..+++++.++. .++++.|||. ++|+++ ..|.|++++ ++.+ ++ +.........+|++
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g~-~l~~~~~~~~~i~~~~-~~~~----~~-------------~~~~~~~~~~~l~~ 76 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPARS-AVIFSDVRQNRTWAWS-DDGQ----LS-------------PEMHPSHHQNGHCL 76 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGT-EEEEEEGGGTEEEEEE-TTSC----EE-------------EEESSCSSEEEEEE
T ss_pred CCCcEEEEecCCccccCCeEeCCCC-EEEEEeCCCCEEEEEE-CCCC----eE-------------EEECCCCCcceeeE
Confidence 4667788888876 7899999994 466666 578999886 3322 11 11122345789999
Q ss_pred CCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeE
Q 005466 280 HPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVR 359 (695)
Q Consensus 280 hPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~ 359 (695)
+| +|.+|+.-... ..|.+|.... .+.+
T Consensus 77 ~~----dg~l~v~~~~~------------------------------------~~i~~~d~~~-------------g~~~ 103 (296)
T 3e5z_A 77 NK----QGHLIACSHGL------------------------------------RRLERQREPG-------------GEWE 103 (296)
T ss_dssp CT----TCCEEEEETTT------------------------------------TEEEEECSTT-------------CCEE
T ss_pred CC----CCcEEEEecCC------------------------------------CeEEEEcCCC-------------CcEE
Confidence 97 67888753210 1565664311 1223
Q ss_pred EEEEecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCC
Q 005466 360 RIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPK 439 (695)
Q Consensus 360 ~Il~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~ 439 (695)
.+...........-..|.|+| ||.||++....+...+............|+|+|++.++.
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~------------------- 163 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT------------------- 163 (296)
T ss_dssp EEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-------------------
T ss_pred EEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-------------------
Confidence 332211000112234699999 999999742211000000000111223579999998752
Q ss_pred CCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCC
Q 005466 440 DNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 440 DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
.+.+.-++..|.+++|++.. ..| ++|.+.+.
T Consensus 164 -----------~~~~~~~~~~~~gi~~s~dg-~~l-v~~~~~~~ 194 (296)
T 3e5z_A 164 -----------LSAPIRDRVKPNGLAFLPSG-NLL-VSDTGDNA 194 (296)
T ss_dssp -----------EEEEECCCSSEEEEEECTTS-CEE-EEETTTTE
T ss_pred -----------EEEeecCCCCCccEEECCCC-CEE-EEeCCCCe
Confidence 23456677889999999975 345 77876543
No 9
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.45 E-value=7.5e-05 Score=73.66 Aligned_cols=233 Identities=12% Similarity=0.129 Sum_probs=134.2
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|+..++| ++||++. .+.|++++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 65 ~~i~~~~~g--~l~v~~~~~~~v~~~d-~~-g~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 122 (300)
T 2qc5_A 65 MCLIVSSLG--DIWFTENGANKIGKLS-KK-GG--FTEY-------PL-----PQPDSGPYGITEGL----NGDIWFTQL 122 (300)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SC--EEEE-------EC-----SSTTCCEEEEEECS----TTCEEEEET
T ss_pred eeEEECCCC--CEEEEecCCCeEEEEC-CC-CC--eEEe-------cC-----CCCCCCCccceECC----CCCEEEEcc
Confidence 788888988 7999987 68898875 33 32 1110 00 01225678999996 688888632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
.. ..|.++..+ .+.+.+ ..+....+-.
T Consensus 123 ~~------------------------------------~~i~~~~~~--------------g~~~~~---~~~~~~~~~~ 149 (300)
T 2qc5_A 123 NG------------------------------------DRIGKLTAD--------------GTIYEY---DLPNKGSYPA 149 (300)
T ss_dssp TT------------------------------------TEEEEECTT--------------SCEEEE---ECSSTTCCEE
T ss_pred CC------------------------------------CeEEEECCC--------------CCEEEc---cCCCCCCCce
Confidence 10 155555432 112211 2333334455
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.+++ ||.||++.-. .++|.|++.++.. ..+.+|
T Consensus 150 ~i~~d~-~g~l~v~~~~-----------------~~~i~~~~~~g~~-----------~~~~~~---------------- 184 (300)
T 2qc5_A 150 FITLGS-DNALWFTENQ-----------------NNSIGRITNTGKL-----------EEYPLP---------------- 184 (300)
T ss_dssp EEEECT-TSSEEEEETT-----------------TTEEEEECTTCCE-----------EEEECS----------------
T ss_pred eEEECC-CCCEEEEecC-----------------CCeEEEECCCCcE-----------EEeeCC----------------
Confidence 799999 9999997632 2568888876520 011111
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 534 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p~~~t~~~~~~~i~Pi~~y~H~ 534 (695)
.++.+|.++++|+. + +||+++.+.+ .|.++...+. +. .+..+
T Consensus 185 -~~~~~~~~i~~d~~-g-~l~v~~~~~~---~i~~~~~~g~--~~----------------------------~~~~~-- 226 (300)
T 2qc5_A 185 -TNAAAPVGITSGND-G-ALWFVEIMGN---KIGRITTTGE--IS----------------------------EYDIP-- 226 (300)
T ss_dssp -STTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC--EE----------------------------EEECS--
T ss_pred -CCCCCcceEEECCC-C-CEEEEccCCC---EEEEEcCCCc--EE----------------------------EEECC--
Confidence 13467899999986 4 5999987653 3443332100 00 00000
Q ss_pred ccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCC
Q 005466 535 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 614 (695)
Q Consensus 535 ~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~ 614 (695)
.+...|.++.+- | .|.+++++...++|..+.. +|.+.. +.+ +. ..
T Consensus 227 -----~~~~~~~~i~~d-----~--~g~l~v~~~~~~~i~~~~~----~g~~~~--~~~-------------~~----~~ 271 (300)
T 2qc5_A 227 -----TPNARPHAITAG-----K--NSEIWFTEWGANQIGRITN----DNTIQE--YQL-------------QT----EN 271 (300)
T ss_dssp -----STTCCEEEEEEC-----S--TTCEEEEETTTTEEEEECT----TSCEEE--EEC-------------CS----TT
T ss_pred -----CCCCCceEEEEC-----C--CCCEEEeccCCCeEEEECC----CCcEEE--EEC-------------Cc----cC
Confidence 011344554442 1 3678888887788877643 344431 111 10 12
Q ss_pred CccceEEEcCCCcEEEEeCCeEEEEec
Q 005466 615 GYIYSFGEDNRKDIFILTSDGVYRVVR 641 (695)
Q Consensus 615 gri~sf~ed~dGeLYvlts~gIYRIv~ 641 (695)
..+.++.+|++|.||+.+.++|+|+.+
T Consensus 272 ~~~~~i~~~~~g~l~v~~~~~i~~~~p 298 (300)
T 2qc5_A 272 AEPHGITFGKDGSVWFALKCKIGKLNL 298 (300)
T ss_dssp CCCCCEEECTTSCEEEECSSEEEEEEE
T ss_pred CccceeEeCCCCCEEEEccCceEEeCC
Confidence 457899999999999998658988864
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.45 E-value=2.7e-05 Score=80.48 Aligned_cols=28 Identities=7% Similarity=0.161 Sum_probs=22.4
Q ss_pred CCccceEEEcCCCcEEEEeC--CeEEEEec
Q 005466 614 LGYIYSFGEDNRKDIFILTS--DGVYRVVR 641 (695)
Q Consensus 614 ~gri~sf~ed~dGeLYvlts--~gIYRIv~ 641 (695)
...+.+++.++||.|||.+. +.|+++..
T Consensus 291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 291 FDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp CSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred cCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 45789999999999999985 35777653
No 11
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.37 E-value=0.00037 Score=68.66 Aligned_cols=233 Identities=14% Similarity=0.204 Sum_probs=134.5
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|+..+|| ++||++. .|.|.+++ ++ + +...+ .+ ........+|+++| +|.+|+.-.
T Consensus 23 ~~i~~d~~g--~l~v~~~~~~~v~~~~-~~-~--~~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 80 (300)
T 2qc5_A 23 YGITSSEDG--KVWFTQHKANKISSLD-QS-G--RIKEF-------EV-----PTPDAKVMCLIVSS----LGDIWFTEN 80 (300)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-S--CEEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred ceeeECCCC--CEEEEcCCCCeEEEEC-CC-C--ceEEE-------EC-----CCCCCcceeEEECC----CCCEEEEec
Confidence 788999998 7999995 68898875 33 2 21110 01 01224578999986 688888632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
.. .+|.+|..+ .+.+. + ..|...+.-.
T Consensus 81 ~~------------------------------------~~v~~~d~~--------------g~~~~-~--~~~~~~~~~~ 107 (300)
T 2qc5_A 81 GA------------------------------------NKIGKLSKK--------------GGFTE-Y--PLPQPDSGPY 107 (300)
T ss_dssp TT------------------------------------TEEEEECTT--------------SCEEE-E--ECSSTTCCEE
T ss_pred CC------------------------------------CeEEEECCC--------------CCeEE-e--cCCCCCCCCc
Confidence 10 256666432 11221 1 2333334456
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.+++ ||.|||+... .++|.|+|.++... .+.+|
T Consensus 108 ~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~~~-----------~~~~~---------------- 142 (300)
T 2qc5_A 108 GITEGL-NGDIWFTQLN-----------------GDRIGKLTADGTIY-----------EYDLP---------------- 142 (300)
T ss_dssp EEEECS-TTCEEEEETT-----------------TTEEEEECTTSCEE-----------EEECS----------------
T ss_pred cceECC-CCCEEEEccC-----------------CCeEEEECCCCCEE-----------EccCC----------------
Confidence 799999 9999998532 35688888775200 11111
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 534 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p~~~t~~~~~~~i~Pi~~y~H~ 534 (695)
.....|.++++|+. + +||+++.+.. .|.++...+. + . .+..+.
T Consensus 143 -~~~~~~~~i~~d~~-g-~l~v~~~~~~---~i~~~~~~g~--~--------------------------~--~~~~~~- 185 (300)
T 2qc5_A 143 -NKGSYPAFITLGSD-N-ALWFTENQNN---SIGRITNTGK--L--------------------------E--EYPLPT- 185 (300)
T ss_dssp -STTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC--E--------------------------E--EEECSS-
T ss_pred -CCCCCceeEEECCC-C-CEEEEecCCC---eEEEECCCCc--E--------------------------E--EeeCCC-
Confidence 13457889999986 4 4999987653 3433322100 0 0 000000
Q ss_pred ccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCC
Q 005466 535 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 614 (695)
Q Consensus 535 ~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~ 614 (695)
....+.++.+- | .|.+++++...+.|+.+.. .|.+.. +.+ +. ..
T Consensus 186 ------~~~~~~~i~~d-----~--~g~l~v~~~~~~~i~~~~~----~g~~~~--~~~-------------~~----~~ 229 (300)
T 2qc5_A 186 ------NAAAPVGITSG-----N--DGALWFVEIMGNKIGRITT----TGEISE--YDI-------------PT----PN 229 (300)
T ss_dssp ------TTCCEEEEEEC-----T--TSSEEEEETTTTEEEEECT----TCCEEE--EEC-------------SS----TT
T ss_pred ------CCCCcceEEEC-----C--CCCEEEEccCCCEEEEEcC----CCcEEE--EEC-------------CC----CC
Confidence 11234454442 1 3678888887777877653 344432 111 10 13
Q ss_pred CccceEEEcCCCcEEEEe--CCeEEEEec
Q 005466 615 GYIYSFGEDNRKDIFILT--SDGVYRVVR 641 (695)
Q Consensus 615 gri~sf~ed~dGeLYvlt--s~gIYRIv~ 641 (695)
..+.++.+|++|.||+.+ .++|+|+..
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 468899999999999998 457988865
No 12
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.27 E-value=0.00072 Score=66.52 Aligned_cols=233 Identities=14% Similarity=0.197 Sum_probs=133.3
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|++.+|| ++||++. .|.|++++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 18 ~~i~~d~~g--~l~v~~~~~~~v~~~d-~~-~~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 75 (299)
T 2z2n_A 18 YGITVSDKG--KVWITQHKANMISCIN-LD-GK--ITEY-------PL-----PTPDAKVMCLTISS----DGEVWFTEN 75 (299)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-CC--EEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred cceEECCCC--CEEEEecCCCcEEEEc-CC-CC--eEEe-------cC-----CcccCceeeEEECC----CCCEEEeCC
Confidence 788899999 7999987 68898875 33 22 1110 00 01235678999996 688888632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
.. .+|.+|..+ .+.+. + .+|...+...
T Consensus 76 ~~------------------------------------~~i~~~~~~--------------g~~~~-~--~~~~~~~~~~ 102 (299)
T 2z2n_A 76 AA------------------------------------NKIGRITKK--------------GIIKE-Y--TLPNPDSAPY 102 (299)
T ss_dssp TT------------------------------------TEEEEECTT--------------SCEEE-E--ECSSTTCCEE
T ss_pred CC------------------------------------CeEEEECCC--------------CcEEE-E--eCCCcCCCce
Confidence 10 156666431 11222 2 2343334455
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.+.+ ||.||++... .++|.|+|+++.. ..+.+|
T Consensus 103 ~i~~~~-~g~l~v~~~~-----------------~~~i~~~d~~g~~-----------~~~~~~---------------- 137 (299)
T 2z2n_A 103 GITEGP-NGDIWFTEMN-----------------GNRIGRITDDGKI-----------REYELP---------------- 137 (299)
T ss_dssp EEEECT-TSCEEEEETT-----------------TTEEEEECTTCCE-----------EEEECS----------------
T ss_pred eeEECC-CCCEEEEecC-----------------CceEEEECCCCCE-----------EEecCC----------------
Confidence 799999 9999997632 3568888875520 011111
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 534 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p~~~t~~~~~~~i~Pi~~y~H~ 534 (695)
-...+|.++++|+. + ++|+++.+.. .|.++...+.. . .+...
T Consensus 138 -~~~~~~~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~g~~-----------------------------~-~~~~~-- 179 (299)
T 2z2n_A 138 -NKGSYPSFITLGSD-N-ALWFTENQNN---AIGRITESGDI-----------------------------T-EFKIP-- 179 (299)
T ss_dssp -STTCCEEEEEECTT-S-CEEEEETTTT---EEEEECTTCCE-----------------------------E-EEECS--
T ss_pred -CCCCCCceEEEcCC-C-CEEEEeCCCC---EEEEEcCCCcE-----------------------------E-EeeCC--
Confidence 12457889999987 4 5999886543 34333221000 0 00000
Q ss_pred ccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCC
Q 005466 535 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 614 (695)
Q Consensus 535 ~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~ 614 (695)
.+...+.++.+- | .|.+++++...+.|+.+.. +|.+.. +.+ + ...
T Consensus 180 -----~~~~~~~~i~~~-----~--~g~l~v~~~~~~~i~~~~~----~g~~~~--~~~-------------~----~~~ 224 (299)
T 2z2n_A 180 -----TPASGPVGITKG-----N--DDALWFVEIIGNKIGRITT----SGEITE--FKI-------------P----TPN 224 (299)
T ss_dssp -----STTCCEEEEEEC-----T--TSSEEEEETTTTEEEEECT----TCCEEE--EEC-------------S----STT
T ss_pred -----CCCCcceeEEEC-----C--CCCEEEEccCCceEEEECC----CCcEEE--EEC-------------C----CCC
Confidence 011234444442 1 3678888877777777643 344331 211 1 013
Q ss_pred CccceEEEcCCCcEEEEe--CCeEEEEec
Q 005466 615 GYIYSFGEDNRKDIFILT--SDGVYRVVR 641 (695)
Q Consensus 615 gri~sf~ed~dGeLYvlt--s~gIYRIv~ 641 (695)
.++.++.+|++|.||+.+ .++|+++..
T Consensus 225 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 225 ARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCceeEEECCCCCEEEeccCCceEEEECC
Confidence 468899999999999997 357988865
No 13
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.25 E-value=0.00042 Score=70.51 Aligned_cols=169 Identities=13% Similarity=0.120 Sum_probs=99.8
Q ss_pred CcEEEEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeC
Q 005466 204 GLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 280 (695)
Q Consensus 204 G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfh 280 (695)
+-.+|++++|.. -++++.|||. +||+++. .|+|++++ + ++. + .+.........+++++
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~-~l~~~d~~~~~i~~~~-~-~g~---~-------------~~~~~~~~~~~gl~~d 94 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQR-TLVWSDLVGRRVLGWR-E-DGT---V-------------DVLLDATAFTNGNAVD 94 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGT-EEEEEETTTTEEEEEE-T-TSC---E-------------EEEEESCSCEEEEEEC
T ss_pred CCceEEEecCCcCccCCeEeCCCC-EEEEEECCCCEEEEEe-C-CCC---E-------------EEEeCCCCccceeeEC
Confidence 335788998887 6899999994 5777774 68998875 3 232 1 1111223446789999
Q ss_pred CCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEE
Q 005466 281 PNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRR 360 (695)
Q Consensus 281 PdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~ 360 (695)
| +|++|+.-.. ..+|.+|..++ +.++
T Consensus 95 ~----dG~l~v~~~~------------------------------------~~~v~~~~~~g--------------~~~~ 120 (305)
T 3dr2_A 95 A----QQRLVHCEHG------------------------------------RRAITRSDADG--------------QAHL 120 (305)
T ss_dssp T----TSCEEEEETT------------------------------------TTEEEEECTTS--------------CEEE
T ss_pred C----CCCEEEEECC------------------------------------CCEEEEECCCC--------------CEEE
Confidence 7 6888875321 02566664321 2233
Q ss_pred EEEecCCC-CCccccceEEcCCCCeEEEEe---cCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcC
Q 005466 361 IFTMGLSF-NGHHGGQLLFGPTDGYMYFMM---GDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYS 436 (695)
Q Consensus 361 Il~~~~P~-~~H~GG~L~FGP~DG~LYi~~---GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~Ys 436 (695)
+... ... ....-..|.+.| ||.||++- |-.. +-...........+.|.|+|+++.
T Consensus 121 ~~~~-~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~---~~~~~~~~~~~~~~~v~~~d~~~g---------------- 179 (305)
T 3dr2_A 121 LVGR-YAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRK---PSQGCPADPELAHHSVYRLPPDGS---------------- 179 (305)
T ss_dssp EECE-ETTEECSCCCCEEECT-TSCEEEECCSGGGSC---GGGSCCCCCSSSCEEEEEECSSSC----------------
T ss_pred EEec-cCCCccCCCCCEEECC-CCCEEEeCcCCCccc---cccccccccccCCCeEEEEcCCCC----------------
Confidence 3211 111 112234699999 99999963 2110 000001111223588999998541
Q ss_pred CCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccC
Q 005466 437 IPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQ 481 (695)
Q Consensus 437 IP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~ 481 (695)
..+.++ ++..|.+++|++.. ..||++|...
T Consensus 180 -------------~~~~~~-~~~~p~gl~~spdg-~~lyv~~~~~ 209 (305)
T 3dr2_A 180 -------------PLQRMA-DLDHPNGLAFSPDE-QTLYVSQTPE 209 (305)
T ss_dssp -------------CCEEEE-EESSEEEEEECTTS-SEEEEEECCC
T ss_pred -------------cEEEEe-cCCCCcceEEcCCC-CEEEEEecCC
Confidence 124455 88999999999975 4699998753
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.24 E-value=0.00091 Score=65.79 Aligned_cols=235 Identities=14% Similarity=0.156 Sum_probs=133.5
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|++.+|| ++||+.. .|.|++++ ++ +.-+.+ .+ ........+|+++| +|++|+.-.
T Consensus 60 ~~i~~~~~g--~l~v~~~~~~~i~~~~-~~-g~~~~~---------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 117 (299)
T 2z2n_A 60 MCLTISSDG--EVWFTENAANKIGRIT-KK-GIIKEY---------TL-----PNPDSAPYGITEGP----NGDIWFTEM 117 (299)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SCEEEE---------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred eeEEECCCC--CEEEeCCCCCeEEEEC-CC-CcEEEE---------eC-----CCcCCCceeeEECC----CCCEEEEec
Confidence 678888998 7999986 68898875 32 221111 01 01234678999996 678888532
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
.. ..|.++..++ +.+.+ ..+...+...
T Consensus 118 ~~------------------------------------~~i~~~d~~g--------------~~~~~---~~~~~~~~~~ 144 (299)
T 2z2n_A 118 NG------------------------------------NRIGRITDDG--------------KIREY---ELPNKGSYPS 144 (299)
T ss_dssp TT------------------------------------TEEEEECTTC--------------CEEEE---ECSSTTCCEE
T ss_pred CC------------------------------------ceEEEECCCC--------------CEEEe---cCCCCCCCCc
Confidence 10 1555554311 12211 1233334456
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.+++ ||.||++.-. .++|.|+|+++.. ..+.+
T Consensus 145 ~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~~-----------~~~~~----------------- 178 (299)
T 2z2n_A 145 FITLGS-DNALWFTENQ-----------------NNAIGRITESGDI-----------TEFKI----------------- 178 (299)
T ss_dssp EEEECT-TSCEEEEETT-----------------TTEEEEECTTCCE-----------EEEEC-----------------
T ss_pred eEEEcC-CCCEEEEeCC-----------------CCEEEEEcCCCcE-----------EEeeC-----------------
Confidence 799999 9999997521 3568888875420 00111
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 534 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p~~~t~~~~~~~i~Pi~~y~H~ 534 (695)
..++.+|.++++|+. + +||+++.+.+ .|.++...+. +. .+..+
T Consensus 179 ~~~~~~~~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~g~--~~----------------------------~~~~~-- 221 (299)
T 2z2n_A 179 PTPASGPVGITKGND-D-ALWFVEIIGN---KIGRITTSGE--IT----------------------------EFKIP-- 221 (299)
T ss_dssp SSTTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC--EE----------------------------EEECS--
T ss_pred CCCCCcceeEEECCC-C-CEEEEccCCc---eEEEECCCCc--EE----------------------------EEECC--
Confidence 123567889999987 4 5999987653 3444332100 00 00000
Q ss_pred ccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCC
Q 005466 535 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 614 (695)
Q Consensus 535 ~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~ 614 (695)
.+...|.+..+- | .|.+++++...+.|+.+.. .|.+. .+.+ ++ ..
T Consensus 222 -----~~~~~~~~i~~~-----~--~g~l~v~~~~~~~i~~~d~----~g~~~--~~~~-------------~~----~~ 266 (299)
T 2z2n_A 222 -----TPNARPHAITAG-----A--GIDLWFTEWGANKIGRLTS----NNIIE--EYPI-------------QI----KS 266 (299)
T ss_dssp -----STTCCEEEEEEC-----S--TTCEEEEETTTTEEEEEET----TTEEE--EEEC-------------SS----SS
T ss_pred -----CCCCCceeEEEC-----C--CCCEEEeccCCceEEEECC----CCceE--EEeC-------------CC----CC
Confidence 011345554442 1 3678888887788888753 24322 2211 10 12
Q ss_pred CccceEEEcCCCcEEEEe-CCeEEEEecCCC
Q 005466 615 GYIYSFGEDNRKDIFILT-SDGVYRVVRPSR 644 (695)
Q Consensus 615 gri~sf~ed~dGeLYvlt-s~gIYRIv~ps~ 644 (695)
..+.++.+ ++|.||+.+ .++|+|+.+.++
T Consensus 267 ~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 267 AEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp CCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred CccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 46888999 999999997 468999876543
No 15
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.20 E-value=0.00025 Score=69.43 Aligned_cols=232 Identities=13% Similarity=0.149 Sum_probs=128.6
Q ss_pred eeEEEcCCCCceEEE-Ee-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFF-SN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV-~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
.+|++.+|| ++|| ++ ..|.|++++ ++ .+. .. . ..........+|+++| +|.+||.-
T Consensus 27 ~~i~~~~~g--~l~v~~~~~~~~i~~~~-~~--~~~-~~------~------~~~~~~~~p~~i~~~~----~g~l~v~~ 84 (270)
T 1rwi_B 27 SGVAVDSAG--NVYVTSEGMYGRVVKLA-TG--STG-TT------V------LPFNGLYQPQGLAVDG----AGTVYVTD 84 (270)
T ss_dssp EEEEECTTC--CEEEEECSSSCEEEEEC-C--------E------E------CCCCSCCSCCCEEECT----TCCEEEEE
T ss_pred cceEECCCC--CEEEEccCCCCcEEEec-CC--Ccc-cc------e------EeeCCcCCcceeEECC----CCCEEEEc
Confidence 688999999 7999 85 468898875 22 111 10 0 0012224578899997 57788864
Q ss_pred eecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCccc
Q 005466 294 NCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHG 373 (695)
Q Consensus 294 s~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~G 373 (695)
. + .+|.+|..++. ..+. + .. ......
T Consensus 85 ~-~------------------------------------~~i~~~d~~~~-------------~~~~-~--~~-~~~~~p 110 (270)
T 1rwi_B 85 F-N------------------------------------NRVVTLAAGSN-------------NQTV-L--PF-DGLNYP 110 (270)
T ss_dssp T-T------------------------------------TEEEEECTTCS-------------CCEE-C--CC-CSCSSE
T ss_pred C-C------------------------------------CEEEEEeCCCc-------------eEee-e--ec-CCcCCC
Confidence 2 1 15666653221 1111 1 11 111234
Q ss_pred cceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeE
Q 005466 374 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 453 (695)
Q Consensus 374 G~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI 453 (695)
..|.|.+ ||.|||+... .|+|.+++.... . ....
T Consensus 111 ~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~~~---------------~-------------~~~~ 144 (270)
T 1rwi_B 111 EGLAVDT-QGAVYVADRG-----------------NNRVVKLAAGSK---------------T-------------QTVL 144 (270)
T ss_dssp EEEEECT-TCCEEEEEGG-----------------GTEEEEECTTCC---------------S-------------CEEC
T ss_pred cceEECC-CCCEEEEECC-----------------CCEEEEEECCCc---------------e-------------eEee
Confidence 5799999 9999997532 357888864331 0 0000
Q ss_pred EEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccC
Q 005466 454 WALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNH 533 (695)
Q Consensus 454 ~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~~eG~~~~~p~~~p~~~t~~~~~~~i~Pi~~y~H 533 (695)
...++.+|.++++|+. + +||++|.+.+ .|.++...+..-+ .....
T Consensus 145 ~~~~~~~p~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~~~~~~-----------------------------~~~~~- 189 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNS-G-NVYVTDTDNN---RVVKLEAESNNQV-----------------------------VLPFT- 189 (270)
T ss_dssp CCCSCCSCCCEEECTT-C-CEEEEEGGGT---EEEEECTTTCCEE-----------------------------ECCCS-
T ss_pred ccccCCCceeEEEeCC-C-CEEEEECCCC---EEEEEecCCCceE-----------------------------eeccc-
Confidence 1235678999999996 4 5999997643 3444432211100 00000
Q ss_pred CccCCCCCCcccccceeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCC
Q 005466 534 SEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPS 613 (695)
Q Consensus 534 ~~~~~~~Gs~S~tGg~vYrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~ 613 (695)
+...+.+..+- | .|.+++++...++|+.+.. + |.... .+ . . ..
T Consensus 190 -------~~~~p~~i~~d-----~--~g~l~v~~~~~~~v~~~~~--~--~~~~~-~~----------~----~----~~ 232 (270)
T 1rwi_B 190 -------DITAPWGIAVD-----E--AGTVYVTEHNTNQVVKLLA--G--STTST-VL----------P----F----TG 232 (270)
T ss_dssp -------SCCSEEEEEEC-----T--TCCEEEEETTTSCEEEECT--T--CSCCE-EC----------C----C----CS
T ss_pred -------CCCCceEEEEC-----C--CCCEEEEECCCCcEEEEcC--C--CCcce-ee----------c----c----CC
Confidence 00234454442 1 3678888887788877653 2 22110 00 0 0 11
Q ss_pred CCccceEEEcCCCcEEEEeC--CeEEEEec
Q 005466 614 LGYIYSFGEDNRKDIFILTS--DGVYRVVR 641 (695)
Q Consensus 614 ~gri~sf~ed~dGeLYvlts--~gIYRIv~ 641 (695)
...+.++++|++|.||+.+. +.|+++..
T Consensus 233 ~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 233 LNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred CCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 34688999999999999985 35666554
No 16
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.17 E-value=0.00083 Score=73.46 Aligned_cols=275 Identities=14% Similarity=0.113 Sum_probs=142.7
Q ss_pred eeEEEcCC-CCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPD-GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pD-Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|++.|+ ..++|||++..++|++++ ++.+ +... .........+||++| +|.+||.-.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id-~~~g--~v~~--------------~~~~~~~P~giavd~----dG~lyVad~ 200 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVD-FVNQ--YVDI--------------KTTNIGQCADVNFTL----NGDMVVVDD 200 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEE-TTTT--EEEE--------------ECCCCSCEEEEEECT----TCCEEEEEC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEE-CCCC--EEEE--------------eecCCCCccEEEECC----CCCEEEEcC
Confidence 67899986 233899999888999886 3322 2111 111334578999997 566888643
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
.... ....|..+..... ... ...+. ...+--
T Consensus 201 ~~~~--------------------------------~~~gv~~~~~~~~-----------~~~-~~~~~-----~~~~P~ 231 (433)
T 4hw6_A 201 QSSD--------------------------------TNTGIYLFTRASG-----------FTE-RLSLC-----NARGAK 231 (433)
T ss_dssp CSCT--------------------------------TSEEEEEECGGGT-----------TCC-EEEEE-----ECSSBC
T ss_pred CCCc--------------------------------ccceEEEEECCCC-----------eec-ccccc-----ccCCCC
Confidence 1100 0123333332111 111 12221 112223
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.+.|.+|.|||+.- ..+.|.||++++. .+ ...++
T Consensus 232 giavd~~~G~lyv~d~-----------------~~~~V~~~d~~~g---------------~~------------~~~~~ 267 (433)
T 4hw6_A 232 TCAVHPQNGKIYYTRY-----------------HHAMISSYDPATG---------------TL------------TEEEV 267 (433)
T ss_dssp CCEECTTTCCEEECBT-----------------TCSEEEEECTTTC---------------CE------------EEEEE
T ss_pred EEEEeCCCCeEEEEEC-----------------CCCEEEEEECCCC---------------eE------------EEEEe
Confidence 5889887799999742 1357999998731 00 00122
Q ss_pred Eecc-ccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCccc-ccCCCcCCCCCCCCCCCCCCCCCCCCceeecc
Q 005466 455 ALGL-RNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRL-YEGPYLFTPLETPGGITPLNSVSPIFPVLGYN 532 (695)
Q Consensus 455 A~Gl-RNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~-~eG~~~~~p~~~p~~~t~~~~~~~i~Pi~~y~ 532 (695)
..|- ..+.+++||+... +||++|.+.+..-.++.=...+.++.+. ..|... . .+ .. ++ ..-...+
T Consensus 268 ~~~~~~~~~~ia~dpdG~-~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g-~----~g-~~--dg---~~~~a~~- 334 (433)
T 4hw6_A 268 MMDTKGSNFHIVWHPTGD-WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHS-S----PG-WV--DG---MGTGARL- 334 (433)
T ss_dssp ECSCCSSCEEEEECTTSS-EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTT-C----CC-CB--CE---EGGGSBC-
T ss_pred ccCCCCCcccEEEeCCCC-EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCC-C----Cc-cC--CC---cccceEE-
Confidence 2221 2345699999854 6999999876543333211122222221 011000 0 00 00 00 0000001
Q ss_pred CCccCCCCCCccccccee-----ecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccc--cc
Q 005466 533 HSEVNKKEGSASITGGYF-----YRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQC--KV 605 (695)
Q Consensus 533 H~~~~~~~Gs~S~tGg~v-----YrG~~fP~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c--~~ 605 (695)
..|.|+.| |.++ .-.|.++++|...++|+.+. | .|... .+ . +.. ..| -+
T Consensus 335 ----------~~P~giav~~n~~y~~d---d~~g~lyvaD~~n~~I~~~~--~--~G~v~--t~--~--G~g-~~~~~G~ 390 (433)
T 4hw6_A 335 ----------WGPNQGIFVKNEAYAGE---EDEYDFYFCDRDSHTVRVLT--P--EGRVT--TY--A--GRG-NSREWGY 390 (433)
T ss_dssp ----------SSEEEEEEEECGGGTTS---SCCEEEEEEETTTTEEEEEC--T--TSEEE--EE--E--CCC-TTCSSCC
T ss_pred ----------cCCccEEEEcccccccc---CCCCcEEEEECCCCEEEEEC--C--CCCEE--EE--E--eCC-CCCcccc
Confidence 34667777 4332 12478999999999998875 3 35322 22 1 111 100 01
Q ss_pred cCC-CC-CCCCCccceEEEc-CCCcEEEEeC--CeEEEEec
Q 005466 606 LPG-ND-LPSLGYIYSFGED-NRKDIFILTS--DGVYRVVR 641 (695)
Q Consensus 606 ~~g-~~-~~~~gri~sf~ed-~dGeLYvlts--~gIYRIv~ 641 (695)
..| .. ...+.++.+++.| ++|.|||.+. +.|.||..
T Consensus 391 ~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 391 VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 112 11 1235689999999 8999999986 36888764
No 17
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.15 E-value=0.0019 Score=65.55 Aligned_cols=156 Identities=10% Similarity=0.001 Sum_probs=93.7
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
-+.++.|++. ++|+++. .++|++++ ++.+. . + +. .......+++++| +|.+|+..
T Consensus 16 Egp~w~~~~~-~l~~~d~~~~~i~~~d-~~~~~--~-~-------------~~-~~~~~~~~i~~~~----dG~l~v~~- 71 (297)
T 3g4e_A 16 ESPVWEEVSN-SLLFVDIPAKKVCRWD-SFTKQ--V-Q-------------RV-TMDAPVSSVALRQ----SGGYVATI- 71 (297)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEE-TTTCC--E-E-------------EE-ECSSCEEEEEEBT----TSSEEEEE-
T ss_pred cCCeEECCCC-EEEEEECCCCEEEEEE-CCCCc--E-E-------------EE-eCCCceEEEEECC----CCCEEEEE-
Confidence 5788888653 7888885 68999886 33221 1 1 00 1123467889987 57787753
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
. ..|.+|..+. .+.+.+...........-.
T Consensus 72 -~------------------------------------~~l~~~d~~~-------------g~~~~~~~~~~~~~~~~~~ 101 (297)
T 3g4e_A 72 -G------------------------------------TKFCALNWKE-------------QSAVVLATVDNDKKNNRFN 101 (297)
T ss_dssp -T------------------------------------TEEEEEETTT-------------TEEEEEEECCTTCSSEEEE
T ss_pred -C------------------------------------CeEEEEECCC-------------CcEEEEEecCCCCCCCCCC
Confidence 1 1456665421 1233343321101112234
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.++| ||.||+++-.... .........|+|+|++.++. .+..
T Consensus 102 di~~d~-dG~l~~~~~~~~~------~~~~~~~~~~~l~~~d~~g~------------------------------~~~~ 144 (297)
T 3g4e_A 102 DGKVDP-AGRYFAGTMAEET------APAVLERHQGALYSLFPDHH------------------------------VKKY 144 (297)
T ss_dssp EEEECT-TSCEEEEEEECCS------BTTBCCTTCEEEEEECTTSC------------------------------EEEE
T ss_pred CEEECC-CCCEEEecCCccc------ccccccCCCcEEEEEECCCC------------------------------EEEE
Confidence 699999 9999997632211 11123345799999998762 1335
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCC
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
.-++..|.+++|++.. ..||++|-..+.
T Consensus 145 ~~~~~~pngi~~spdg-~~lyv~~~~~~~ 172 (297)
T 3g4e_A 145 FDQVDISNGLDWSLDH-KIFYYIDSLSYS 172 (297)
T ss_dssp EEEESBEEEEEECTTS-CEEEEEEGGGTE
T ss_pred eeccccccceEEcCCC-CEEEEecCCCCc
Confidence 5677889999999975 469999987654
No 18
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.10 E-value=0.00016 Score=76.50 Aligned_cols=169 Identities=15% Similarity=0.129 Sum_probs=107.7
Q ss_pred CCCcEEEEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeee
Q 005466 202 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMA 278 (695)
Q Consensus 202 p~G~~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiA 278 (695)
+.|-..+.+..++. .+|++.+++. +||+++. .++|+.++. + |+.. ..+...+....-|||
T Consensus 60 ~~g~~~~~~~~~~~~~~~l~~d~~~~-~ly~~D~~~~~I~r~~~-~-g~~~--------------~~~~~~~~~~p~gla 122 (349)
T 3v64_C 60 PHRSEYTLLLNNLENAIALDFHHRRE-LVFWSDVTLDRILRANL-N-GSNV--------------EEVVSTGLESPGGLA 122 (349)
T ss_dssp TTSCCEEEEECSCSCEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSC--------------EEEECSSCSCCCEEE
T ss_pred CCCCeeEEeecCCCceEEEEEecccc-EEEEEeccCCceEEEec-C-CCCc--------------eEEEeCCCCCccEEE
Confidence 34545667777766 8899987543 8999996 688988763 3 3211 012222334568999
Q ss_pred eCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCe
Q 005466 279 FHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEV 358 (695)
Q Consensus 279 fhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~ 358 (695)
+|| .++.+|+.-.. ..+|.+++.++. ..
T Consensus 123 vd~---~~g~ly~~d~~------------------------------------~~~I~~~~~dG~-------------~~ 150 (349)
T 3v64_C 123 VDW---VHDKLYWTDSG------------------------------------TSRIEVANLDGA-------------HR 150 (349)
T ss_dssp EET---TTTEEEEEETT------------------------------------TTEEEEEETTSC-------------SC
T ss_pred Eec---CCCeEEEEcCC------------------------------------CCeEEEEcCCCC-------------ce
Confidence 996 47889886321 026666665432 22
Q ss_pred EEEEEecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCC
Q 005466 359 RRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIP 438 (695)
Q Consensus 359 ~~Il~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP 438 (695)
++++.. ....--.|+++|.+|+||++--. ..++|.|++.||..
T Consensus 151 ~~l~~~----~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~----------------- 193 (349)
T 3v64_C 151 KVLLWQ----SLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSG----------------- 193 (349)
T ss_dssp EEEECT----TCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCS-----------------
T ss_pred EEEEeC----CCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCC-----------------
Confidence 333321 12334569999867999998411 04789999999830
Q ss_pred CCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 439 KDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 439 ~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
+..+...++..|.+++||+..+ +||++|.+.+..+.++
T Consensus 194 -----------~~~~~~~~~~~PnGla~d~~~~-~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 194 -----------RRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERAN 231 (349)
T ss_dssp -----------CEESCCSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred -----------cEEEEECCCCCcceEEEeCCCC-EEEEEECCCCEEEEEe
Confidence 1123345789999999998766 7999999876555554
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.04 E-value=0.0001 Score=79.12 Aligned_cols=165 Identities=15% Similarity=0.124 Sum_probs=105.0
Q ss_pred EEEEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 206 CLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 206 ~le~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
.++.++.++. .+|++.+++. +||+++. .++|+.++. + |+. .+ .+...+....-|||++|
T Consensus 107 ~~~~~~~~~~~~~gl~~d~~~~-~ly~~D~~~~~I~r~~~-~-g~~--~~------------~~~~~~~~~p~glavd~- 168 (386)
T 3v65_B 107 EYTLLLNNLENAIALDFHHRRE-LVFWSDVTLDRILRANL-N-GSN--VE------------EVVSTGLESPGGLAVDW- 168 (386)
T ss_dssp CCEEEECSCSCEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCC--EE------------EEECSSCSCCCCEEEET-
T ss_pred cEEEEecCCCccEEEEEecCCC-eEEEEeCCCCcEEEEec-C-CCC--cE------------EEEeCCCCCccEEEEEe-
Confidence 4566677766 8899987543 8999996 688988863 2 321 10 11222334568999997
Q ss_pred CCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEE
Q 005466 283 FAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIF 362 (695)
Q Consensus 283 F~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il 362 (695)
.++.+|+.-... .+|.++..++. ..++++
T Consensus 169 --~~g~lY~~d~~~------------------------------------~~I~~~~~dg~-------------~~~~l~ 197 (386)
T 3v65_B 169 --VHDKLYWTDSGT------------------------------------SRIEVANLDGA-------------HRKVLL 197 (386)
T ss_dssp --TTTEEEEEETTT------------------------------------TEEEECBTTSC-------------SCEEEE
T ss_pred --CCCeEEEEcCCC------------------------------------CeEEEEeCCCC-------------ceEEee
Confidence 478898864310 25555543321 223333
Q ss_pred EecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCC
Q 005466 363 TMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNP 442 (695)
Q Consensus 363 ~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNP 442 (695)
.. ....--.|+++|.+|+||++--. ..++|.|++.||.
T Consensus 198 ~~----~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~---------------------- 235 (386)
T 3v65_B 198 WQ----SLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGS---------------------- 235 (386)
T ss_dssp CS----SCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSC----------------------
T ss_pred cC----CCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCC----------------------
Confidence 21 12334569999867999998311 1478999999983
Q ss_pred CCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 443 FSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 443 F~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
.+..+...++..|.+++||+..+ +||++|.+.+..+.++
T Consensus 236 ------~~~~~~~~~~~~PnGlavd~~~~-~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 236 ------GRRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERAN 274 (386)
T ss_dssp ------SCEEEECSSCSCEEEEEEEGGGT-EEEEEETTTTEEEEEC
T ss_pred ------CcEEEEECCCCCeeeEEEeCCCC-EEEEEECCCCEEEEEe
Confidence 12245567899999999998766 7999998876444433
No 20
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.04 E-value=0.00088 Score=72.33 Aligned_cols=176 Identities=14% Similarity=0.098 Sum_probs=95.2
Q ss_pred EEEEEecCce-eeEEEcCCCCceEEEEeeCc--eEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 206 CLEKIGNGSY-LNMVAHPDGSNRAFFSNQEG--KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 206 ~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G--~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
.++.+..+.. ..+++.|||. +||+++..| .|++++. +.+. . +.. + ..+......+..++|+||+
T Consensus 163 ~~~~~~~~~~~~~ia~~~~g~-~l~~~d~~~~~~I~~~d~-~~~~-~-~~~------~---g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 163 KVTTVHPGFKGGKPAVTKDKQ-RVYSIGWEGTHTVYVYMK-ASGW-A-PTR------I---GQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp EEEEEEETCCBCBCEECTTSS-EEEEEBSSTTCEEEEEEG-GGTT-C-EEE------E---EECCTTSCSCCCBCEECTT
T ss_pred EEEEeeccCCCCceeEecCCC-cEEEEecCCCceEEEEEc-CCCc-e-eEE------e---eeccchhcCCcEEEEEeCC
Confidence 4445554433 2289999985 799999865 8998863 2211 1 100 0 0001113356789999984
Q ss_pred CCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEE
Q 005466 283 FAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIF 362 (695)
Q Consensus 283 F~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il 362 (695)
+|++|+... + .+|.+|..+.. . ..++
T Consensus 230 ---~g~lyv~d~-----------------------------~--------~~I~~~d~~~~-------------~-~~~~ 255 (409)
T 3hrp_A 230 ---EEWLYFVDS-----------------------------N--------KNFGRFNVKTQ-------------E-VTLI 255 (409)
T ss_dssp ---SSEEEEECT-----------------------------T--------CEEEEEETTTC-------------C-EEEE
T ss_pred ---CCeEEEEEC-----------------------------C--------CcEEEEECCCC-------------C-EEEE
Confidence 899999321 0 26777765321 1 2233
Q ss_pred E-ecCCCCCccc-c-ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCC
Q 005466 363 T-MGLSFNGHHG-G-QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPK 439 (695)
Q Consensus 363 ~-~~~P~~~H~G-G-~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~ 439 (695)
. .......... . .|.|.|.+|.|||+-- ..++|.|++.|+... . + .
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~-----------------~~~~I~~~~~~g~~~-----~--------~-~ 304 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ-----------------NLSSVYKITPDGECE-----W--------F-C 304 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEET-----------------TTTEEEEECTTCCEE-----E--------E-E
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeC-----------------CCCEEEEEecCCCEE-----E--------E-E
Confidence 1 1111111111 2 7999995699999732 235799999887310 0 0 0
Q ss_pred CCCCCCCCCCCCe-EEEeccccceeeeecCCCCCeEEEEEc-cCCC
Q 005466 440 DNPFSEDSGLQPE-IWALGLRNPWRCSFDSDRPSYFMCADV-GQDV 483 (695)
Q Consensus 440 DNPF~~~~~~~pE-I~A~GlRNP~r~sfD~~~g~~l~~~Dv-G~d~ 483 (695)
..+. ..+.... .-.-.|..|.+++||+. | +||++|. +.+.
T Consensus 305 g~~~--~~g~~dg~~~~~~~~~P~gia~d~d-G-~lyvad~~~~~~ 346 (409)
T 3hrp_A 305 GSAT--QKTVQDGLREEALFAQPNGMTVDED-G-NFYIVDGFKGYC 346 (409)
T ss_dssp ECTT--CCSCBCEEGGGCBCSSEEEEEECTT-C-CEEEEETTTTCE
T ss_pred eCCC--CCCcCCCcccccEeCCCeEEEEeCC-C-CEEEEeCCCCCE
Confidence 0000 0000000 00112678999999997 4 4999998 7654
No 21
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=0.0029 Score=69.01 Aligned_cols=280 Identities=11% Similarity=0.090 Sum_probs=141.8
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEee
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNC 295 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs~ 295 (695)
..|++.|+..++|||+++.++|++++. +.+ .+. ..........+|||+|+ ..++||.-..
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~-~~~---~v~-------------~~~~~~~~P~~ia~d~~---G~~lyvad~~ 199 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDF-EKE---YVS-------------TVYSGLSKVRTICWTHE---ADSMIITNDQ 199 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEET-TTT---EEE-------------EEECCCSCEEEEEECTT---SSEEEEEECC
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEEC-CCC---EEE-------------EEecCCCCcceEEEeCC---CCEEEEEeCC
Confidence 678888731138999998888988863 221 111 01123456889999973 3358886542
Q ss_pred cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCccccc
Q 005466 296 DKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQ 375 (695)
Q Consensus 296 ~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG~ 375 (695)
... ...+|..+..++. ....+.+-. .++-..
T Consensus 200 ~~~--------------------------------~~~~v~~~~~~g~-----------~~~~~~l~~------~~~p~g 230 (430)
T 3tc9_A 200 NNN--------------------------------DRPNNYILTRESG-----------FKVITELTK------GQNCNG 230 (430)
T ss_dssp SCT--------------------------------TSEEEEEEEGGGT-----------SCSEEEEEE------CSSCCC
T ss_pred CCc--------------------------------ccceEEEEeCCCc-----------eeeeeeecc------CCCceE
Confidence 110 0124444443221 111222221 233456
Q ss_pred eEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEEE
Q 005466 376 LLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWA 455 (695)
Q Consensus 376 L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~A 455 (695)
|.+.|.+|+|||+--. .++|+|++.++.. ..+++.
T Consensus 231 iavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~----------------------------~~~~~~ 265 (430)
T 3tc9_A 231 AETHPINGELYFNSWN-----------------AGQVFRYDFTTQE----------------------------TTPLFT 265 (430)
T ss_dssp EEECTTTCCEEEEETT-----------------TTEEEEEETTTTE----------------------------EEEEEE
T ss_pred EEEeCCCCEEEEEECC-----------------CCEEEEEECCCCc----------------------------EEEEEE
Confidence 8899977999997521 3579999998620 012333
Q ss_pred ec-cccceeeeecCCCCCeEEEEEccCCCceeEEEeecCCCCCccc-ccCCCcCCCCCCCCCCCCCCCCCCCCceeeccC
Q 005466 456 LG-LRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRL-YEGPYLFTPLETPGGITPLNSVSPIFPVLGYNH 533 (695)
Q Consensus 456 ~G-lRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG~NYGWp~-~eG~~~~~p~~~p~~~t~~~~~~~i~Pi~~y~H 533 (695)
.+ ...|.+++||+.. .+||++|.+.+....++.=...+.++.+. ..|.. .. .+ .. ++ ... ...+
T Consensus 266 ~~~~~~P~gia~~pdG-~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~--g~---~g-~~--dg-~~~--~a~~-- 331 (430)
T 3tc9_A 266 IQDSGWEFHIQFHPSG-NYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ--GA---KD-WV--DG-VGK--KARM-- 331 (430)
T ss_dssp CSSSSCCEEEEECTTS-SEEEEEETTTTEEEEEEEETTTTEECCCEEEEECT--TC---BC-CB--CE-EGG--GCBB--
T ss_pred cCCCCcceeEEEcCCC-CEEEEEECCCCEEEEEeCCcccccccceEEEeccC--CC---CC-CC--CC-CCc--ceEe--
Confidence 32 2458899999985 36999998876433333211101111111 00100 00 00 00 00 000 0001
Q ss_pred CccCCCCCCcccccceeecCCCC-C-cccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCC-CC
Q 005466 534 SEVNKKEGSASITGGYFYRSMTD-P-CMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPG-ND 610 (695)
Q Consensus 534 ~~~~~~~Gs~S~tGg~vYrG~~f-P-~l~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g-~~ 610 (695)
..|.+|.+....++ . .-.|.++++|...++|..+. | .|... .+ .-.+..... .+..| ..
T Consensus 332 ---------~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~--~--~G~v~--~~--~g~g~~~~~-G~~dG~~~ 393 (430)
T 3tc9_A 332 ---------HAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT--P--QGRVT--TF--AGRGSNGTS-GYNDGDLR 393 (430)
T ss_dssp ---------SSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC--T--TSEEE--EE--EECCTTSSS-SCBCEETT
T ss_pred ---------CCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC--C--CCcEE--EE--EeCCCCCCC-cccCCCch
Confidence 23442333211100 0 12478999999999988775 3 35332 11 111100000 00011 00
Q ss_pred -CCCCCccceEEEcC-CCcEEEEeC--CeEEEEec
Q 005466 611 -LPSLGYIYSFGEDN-RKDIFILTS--DGVYRVVR 641 (695)
Q Consensus 611 -~~~~gri~sf~ed~-dGeLYvlts--~gIYRIv~ 641 (695)
...+.++.+++.|+ +|.|||.+. +.|.||..
T Consensus 394 ~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 394 QEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred hhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 11256899999999 699999986 36888764
No 22
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.99 E-value=0.00028 Score=76.15 Aligned_cols=167 Identities=13% Similarity=0.160 Sum_probs=104.6
Q ss_pred EEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCC
Q 005466 208 EKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 284 (695)
Q Consensus 208 e~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~ 284 (695)
+.+..++. ++|++.+.+. +||+++. .++|+.+.+ + +... .... ..+...+....-|||+++
T Consensus 105 ~~~~~~~~~~~~l~~d~~~~-~lywsD~~~~~I~~~~~-~-g~~~---------~~~~-~~~~~~~~~~p~glavD~--- 168 (400)
T 3p5b_L 105 TSLIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQL-D-RAHG---------VSSY-DTVISRDIQAPDGLAVDW--- 168 (400)
T ss_dssp EEEECSCSCEEEEEEETTTT-EEEEEETTTTEEEEEEC-----------------CCC-EEEECSSCSCEEEEEEET---
T ss_pred eEeccccCcceEEeeeeccC-ceEEEecCCCeEEEEEc-c-cCCC---------CCcc-eEEEeCCCCCcccEEEEe---
Confidence 44555665 8999998553 8999996 588988763 2 2110 0000 122223445678999996
Q ss_pred CCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEe
Q 005466 285 KNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 364 (695)
Q Consensus 285 ~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~ 364 (695)
.++.||+.-+.. .+|.++..++ ...++++..
T Consensus 169 ~~~~lY~~d~~~------------------------------------~~I~~~~~~g-------------~~~~~l~~~ 199 (400)
T 3p5b_L 169 IHSNIYWTDSVL------------------------------------GTVSVADTKG-------------VKRKTLFRE 199 (400)
T ss_dssp TTTEEEEEETTT------------------------------------TEEEEECTTT-------------CSEEEEEEC
T ss_pred cCCceEEEECCC------------------------------------CeEEEEeCCC-------------CceEEEEeC
Confidence 478898864310 2555554432 123344432
Q ss_pred cCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCC
Q 005466 365 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFS 444 (695)
Q Consensus 365 ~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~ 444 (695)
+ ...--.|+++|.+|+||++-- + ..++|.|++.||.
T Consensus 200 ~----~~~P~~iavdp~~g~ly~td~--~--------------~~~~I~~~~~dG~------------------------ 235 (400)
T 3p5b_L 200 N----GSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGV------------------------ 235 (400)
T ss_dssp S----SCCEEEEEEETTTTEEEEEEC--S--------------SSCCEEEEETTSC------------------------
T ss_pred C----CCCcceEEEecccCeEEEEeC--C--------------CCCEEEEEeCCCC------------------------
Confidence 1 223456999987799999851 1 0267999999983
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 445 EDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 445 ~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
.+..+..-++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 236 ----~~~~~~~~~l~~P~glavd~~~~-~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 236 ----DIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 274 (400)
T ss_dssp ----SCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ----ccEEEEECCCCceEEEEEEeCCC-EEEEEECCCCEEEEEe
Confidence 02234556889999999999876 7999999876655555
No 23
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.97 E-value=0.00028 Score=74.04 Aligned_cols=164 Identities=14% Similarity=0.138 Sum_probs=103.3
Q ss_pred EEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCC
Q 005466 208 EKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 284 (695)
Q Consensus 208 e~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~ 284 (695)
+.+..++. ++|.+.+.+. +||+++. .++|+.+.. + |+... ..+...+-...-|||+++
T Consensus 28 ~~~~~~~~~~~~ld~d~~~~-~lyw~D~~~~~I~r~~~-~-g~~~~-------------~~~~~~~l~~p~glavd~--- 88 (318)
T 3sov_A 28 TIVVGGLEDAAAVDFVFSHG-LIYWSDVSEEAIKRTEF-N-KTESV-------------QNVVVSGLLSPDGLACDW--- 88 (318)
T ss_dssp EEEEEEEEEEEEEEEEGGGT-EEEEEETTTTEEEEEET-T-SSSCC-------------CEEEEECCSCCCEEEEET---
T ss_pred EEEecCCCccEEEEEEeCCC-EEEEEECCCCcEEEEEc-c-CCCce-------------EEEEcCCCCCccEEEEEc---
Confidence 34455565 7899988542 8999996 578988763 3 32100 112223335577999996
Q ss_pred CCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEe
Q 005466 285 KNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 364 (695)
Q Consensus 285 ~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~ 364 (695)
.++.+|+.-.. ..+|.++..++. ..++++..
T Consensus 89 ~~g~ly~~d~~------------------------------------~~~I~~~~~dG~-------------~~~~l~~~ 119 (318)
T 3sov_A 89 LGEKLYWTDSE------------------------------------TNRIEVSNLDGS-------------LRKVLFWQ 119 (318)
T ss_dssp TTTEEEEEETT------------------------------------TTEEEEEETTSC-------------SCEEEECS
T ss_pred CCCeEEEEECC------------------------------------CCEEEEEECCCC-------------cEEEEEeC
Confidence 47889885321 026666665332 22333321
Q ss_pred cCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCC
Q 005466 365 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFS 444 (695)
Q Consensus 365 ~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~ 444 (695)
+ ...--.|+++|..|+||++-- + ..++|.|++.||..
T Consensus 120 ~----~~~P~giavdp~~g~ly~td~--~--------------~~~~I~r~~~dG~~----------------------- 156 (318)
T 3sov_A 120 E----LDQPRAIALDPSSGFMYWTDW--G--------------EVPKIERAGMDGSS----------------------- 156 (318)
T ss_dssp S----CSSEEEEEEEGGGTEEEEEEC--S--------------SSCEEEEEETTSCS-----------------------
T ss_pred C----CCCccEEEEeCCCCEEEEEec--C--------------CCCEEEEEEcCCCC-----------------------
Confidence 1 123346899985699999741 0 14689999999830
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 445 EDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 445 ~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
+..+..-++..|.+++||+..+ +||.+|.+.+..+.++
T Consensus 157 -----~~~~~~~~l~~Pnglavd~~~~-~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 157 -----RFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSN 194 (318)
T ss_dssp -----CEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred -----eEEEEECCCCCccEEEEeccCC-EEEEEECCCCEEEEEc
Confidence 1234456799999999999766 7999998876555444
No 24
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.94 E-value=0.00028 Score=83.38 Aligned_cols=167 Identities=14% Similarity=0.162 Sum_probs=104.4
Q ss_pred EEEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCC
Q 005466 208 EKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 284 (695)
Q Consensus 208 e~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~ 284 (695)
+.++.++. ++|++.+.+. +||+++. .++|+.+.+. +.... . .. ..+...+.....|||+|+
T Consensus 417 ~~l~~~~~~~~gl~~d~~~~-~lY~sD~~~~~I~~~~l~--g~~~~-----~----~~-~~vi~~~l~~P~GLAvD~--- 480 (791)
T 3m0c_C 417 TSLIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQLD--RAHGV-----S----SY-DTVISRDIQAPDGLAVDW--- 480 (791)
T ss_dssp EEEECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEEC-------------------C-EEEECSSCSCCCEEEEET---
T ss_pred eeeecCCCceEEEeecccCC-eeEEeeccceeEEEEecc--CCCCC-----c----ce-eEEEecCCCCcceeeeee---
Confidence 44555665 7889987542 8999997 5788887642 21100 0 00 112222445678999997
Q ss_pred CCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEe
Q 005466 285 KNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 364 (695)
Q Consensus 285 ~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~ 364 (695)
..+.||++-+. ..+|.++..++. ..++|+..
T Consensus 481 ~~~~LY~tD~~------------------------------------~~~I~v~~ldG~-------------~~~~l~~~ 511 (791)
T 3m0c_C 481 IHSNIYWTDSV------------------------------------LGTVSVADTKGV-------------KRKTLFRE 511 (791)
T ss_dssp TTTEEEEEETT------------------------------------TTEEEEEETTSS-------------SEEEEEEC
T ss_pred cCCcEEEEecC------------------------------------CCeEEEEeCCCC-------------eEEEEEeC
Confidence 36789886431 126666665432 23444432
Q ss_pred cCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCC
Q 005466 365 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFS 444 (695)
Q Consensus 365 ~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~ 444 (695)
. ...--.|+++|..|+|||+-- + ..++|.|++.||.
T Consensus 512 ~----l~~P~gIaVDp~~g~LYwtD~--g--------------~~~~I~~~~~dG~------------------------ 547 (791)
T 3m0c_C 512 N----GSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGV------------------------ 547 (791)
T ss_dssp T----TCCEEEEEEETTTTEEEEEEC--S--------------SSCEEEEEETTSC------------------------
T ss_pred C----CCCcceEEEecCCCCEEEecC--C--------------CCCeEEEEecCCC------------------------
Confidence 1 223457999995699999851 1 0268999999983
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 445 EDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 445 ~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
.+..+..-++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 548 ----~~~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 548 ----DIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 586 (791)
T ss_dssp ----CEEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ----ceEEEEeCCCCCceEEEEecCCC-eEEEEeCCCCcEEEEe
Confidence 12245566889999999998876 7999998876555544
No 25
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.85 E-value=0.001 Score=69.03 Aligned_cols=163 Identities=13% Similarity=0.159 Sum_probs=99.9
Q ss_pred EecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCC--CceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCC
Q 005466 210 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGL--GETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 284 (695)
Q Consensus 210 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gs--g~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~ 284 (695)
+..++. .+|++.+++. ++|+++. .++|+.++. + +. +... + .+...+-....|||+++
T Consensus 25 ~~~~~~~p~g~~~d~~~~-~ly~~D~~~~~I~~~~~-~-g~~~~~~~-----~-------~~~~~~~~~p~glavd~--- 86 (316)
T 1ijq_A 25 LIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQL-D-RAHGVSSY-----D-------TVISRDIQAPDGLAVDW--- 86 (316)
T ss_dssp EECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEEC----------C-----E-------EEECSSCSCCCEEEEET---
T ss_pred hhcCCCceEEEEEEeCCC-EEEEEECCCCcEEEEEC-C-CCCCCccc-----E-------EEEeCCCCCcCEEEEee---
Confidence 444444 8899988653 8999997 588998863 2 21 0000 0 11112224567999986
Q ss_pred CCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEe
Q 005466 285 KNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 364 (695)
Q Consensus 285 ~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~ 364 (695)
.++.+|+.-... .+|.++..++ ...++++..
T Consensus 87 ~~~~ly~~d~~~------------------------------------~~I~~~~~~g-------------~~~~~~~~~ 117 (316)
T 1ijq_A 87 IHSNIYWTDSVL------------------------------------GTVSVADTKG-------------VKRKTLFRE 117 (316)
T ss_dssp TTTEEEEEETTT------------------------------------TEEEEEETTS-------------SSEEEEEEC
T ss_pred cCCeEEEEECCC------------------------------------CEEEEEeCCC-------------CceEEEEEC
Confidence 378898863210 2566665432 123344431
Q ss_pred cCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCC
Q 005466 365 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFS 444 (695)
Q Consensus 365 ~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~ 444 (695)
. ...--.|+++|.+|+|||+-- + ..++|.|++.||..
T Consensus 118 ~----~~~P~~iavdp~~g~ly~~d~--~--------------~~~~I~~~~~dG~~----------------------- 154 (316)
T 1ijq_A 118 N----GSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGVD----------------------- 154 (316)
T ss_dssp T----TCCEEEEEEETTTTEEEEEEC--S--------------SSCEEEEEETTSCC-----------------------
T ss_pred C----CCCcceEEeCCCCCEEEEEcc--C--------------CCCeEEEEcCCCCC-----------------------
Confidence 1 233456899986899999741 1 03789999999830
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 445 EDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 445 ~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
+..+...++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 155 -----~~~~~~~~~~~P~gla~d~~~~-~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 155 -----IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 192 (316)
T ss_dssp -----EEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred -----eEEEEECCCCCceEEEEeccCC-EEEEEECCCCeEEEEe
Confidence 1123345788999999999766 7999998876555444
No 26
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.83 E-value=0.00059 Score=73.70 Aligned_cols=60 Identities=10% Similarity=0.147 Sum_probs=37.4
Q ss_pred eeEEEcC-CCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCce--e-eeeeCCCCCCCCEEEE
Q 005466 216 LNMVAHP-DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGL--M-GMAFHPNFAKNGRFFA 291 (695)
Q Consensus 216 ~~m~~~p-DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GL--L-GiAfhPdF~~Ng~~Yv 291 (695)
..+++.| +| +|||++..|+|++++. +.+. +.+ +..+ ...+..|. . +|||||+ ++++|+
T Consensus 222 ~~iav~p~~g--~lyv~d~~~~I~~~d~-~~~~---~~~-----~~~~----~~~g~~~~~P~~~ia~~p~---~g~lyv 283 (409)
T 3hrp_A 222 GAVALDETEE--WLYFVDSNKNFGRFNV-KTQE---VTL-----IKQL----ELSGSLGTNPGPYLIYYFV---DSNFYM 283 (409)
T ss_dssp CBCEECTTSS--EEEEECTTCEEEEEET-TTCC---EEE-----EEEC----CCCSCCCCSSCCEEEEETT---TTEEEE
T ss_pred EEEEEeCCCC--eEEEEECCCcEEEEEC-CCCC---EEE-----Eecc----cccCCCCCCccccEEEeCC---CCEEEE
Confidence 7889999 56 8999999999999873 3221 110 0000 01112233 3 9999983 589998
Q ss_pred EE
Q 005466 292 SF 293 (695)
Q Consensus 292 sY 293 (695)
+-
T Consensus 284 ~d 285 (409)
T 3hrp_A 284 SD 285 (409)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 27
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.82 E-value=0.00063 Score=78.17 Aligned_cols=150 Identities=14% Similarity=0.114 Sum_probs=99.1
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
.+|++.+++. +||+++. .++|+.+.+ + |+... .+...+.....|||+|+ .++.+|+.-.
T Consensus 40 ~~l~~d~~~~-~lywtD~~~~~I~r~~~-~-g~~~~--------------~v~~~g~~~P~GlAvD~---~~~~LY~tD~ 99 (628)
T 4a0p_A 40 SALDFDVTDN-RIYWTDISLKTISRAFM-N-GSALE--------------HVVEFGLDYPEGMAVDW---LGKNLYWADT 99 (628)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSCCCEEEEET---TTTEEEEEET
T ss_pred EEEEEECCCC-EEEEEECCCCeEEEEEC-C-CCCcE--------------EEEeCCCCCcceEEEEe---CCCEEEEEEC
Confidence 7899998653 8999996 689998763 2 33110 11112234578999996 4788988532
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
. ..+|.+.+.++. ..++++.. .....-
T Consensus 100 ~------------------------------------~~~I~v~~~dG~-------------~~~~l~~~----~l~~P~ 126 (628)
T 4a0p_A 100 G------------------------------------TNRIEVSKLDGQ-------------HRQVLVWK----DLDSPR 126 (628)
T ss_dssp T------------------------------------TTEEEEEETTST-------------TCEEEECS----SCCCEE
T ss_pred C------------------------------------CCEEEEEecCCC-------------cEEEEEeC----CCCCcc
Confidence 1 126766665432 22334321 122345
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|++.|.+|+||++- -+ -.++|.|++.||. ..++.
T Consensus 127 ~iavdp~~G~lY~tD--~g--------------~~~~I~r~~~dG~-----------------------------~~~~l 161 (628)
T 4a0p_A 127 ALALDPAEGFMYWTE--WG--------------GKPKIDRAAMDGS-----------------------------ERTTL 161 (628)
T ss_dssp EEEEETTTTEEEEEE--CS--------------SSCEEEEEETTSC-----------------------------SCEEE
T ss_pred cEEEccCCCeEEEeC--CC--------------CCCEEEEEeCCCC-----------------------------ceEEE
Confidence 799998789999984 11 0469999999983 13555
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCCc
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDVY 484 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~ 484 (695)
.-++..|.++++|+.++ +||++|.+.+..
T Consensus 162 ~~~~~~P~GlalD~~~~-~LY~aD~~~~~I 190 (628)
T 4a0p_A 162 VPNVGRANGLTIDYAKR-RLYWTDLDTNLI 190 (628)
T ss_dssp ECSCSSEEEEEEETTTT-EEEEEETTTTEE
T ss_pred ECCCCCcceEEEccccC-EEEEEECCCCEE
Confidence 66899999999999866 799999877643
No 28
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.77 E-value=0.0016 Score=64.67 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=95.8
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
.++++.+++. ++|+++. .++|++++. + +.. .. .+...+..+..+||+||+ ++++|+.-.
T Consensus 39 ~gi~~d~~~~-~ly~~d~~~~~I~~~~~-~-g~~--~~------------~~~~~~~~~p~~ia~d~~---~~~lyv~d~ 98 (267)
T 1npe_A 39 IGLAFDCVDK-VVYWTDISEPSIGRASL-H-GGE--PT------------TIIRQDLGSPEGIALDHL---GRTIFWTDS 98 (267)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEES-S-SCC--CE------------EEECTTCCCEEEEEEETT---TTEEEEEET
T ss_pred EEEEEecCCC-EEEEEECCCCEEEEEec-C-CCC--cE------------EEEECCCCCccEEEEEec---CCeEEEEEC
Confidence 6888888653 8999996 689998863 2 221 00 111122356789999974 788988642
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
. ..+|.++..++. ..+++... ......
T Consensus 99 ~------------------------------------~~~I~~~~~~g~-------------~~~~~~~~----~~~~P~ 125 (267)
T 1npe_A 99 Q------------------------------------LDRIEVAKMDGT-------------QRRVLFDT----GLVNPR 125 (267)
T ss_dssp T------------------------------------TTEEEEEETTSC-------------SCEEEECS----SCSSEE
T ss_pred C------------------------------------CCEEEEEEcCCC-------------CEEEEEEC----CCCCcc
Confidence 1 026667765321 12333321 112345
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.|+|.+|+|||+-... ..++|.|++.|+.. ...+.
T Consensus 126 ~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~~----------------------------~~~~~ 162 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGTN----------------------------RRILA 162 (267)
T ss_dssp EEEEETTTTEEEEEECCS---------------SSCEEEEEETTSCC----------------------------CEEEE
T ss_pred EEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCCC----------------------------cEEEE
Confidence 799999458999975210 14789999998820 11233
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCC
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
..++..|.++++|+..+ +||++|.+.+.
T Consensus 163 ~~~~~~P~gia~d~~~~-~lyv~d~~~~~ 190 (267)
T 1npe_A 163 QDNLGLPNGLTFDAFSS-QLCWVDAGTHR 190 (267)
T ss_dssp CTTCSCEEEEEEETTTT-EEEEEETTTTE
T ss_pred ECCCCCCcEEEEcCCCC-EEEEEECCCCE
Confidence 35788999999999755 79999998754
No 29
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.70 E-value=0.0011 Score=76.12 Aligned_cols=160 Identities=14% Similarity=0.154 Sum_probs=101.3
Q ss_pred EecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCC
Q 005466 210 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 286 (695)
Q Consensus 210 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~N 286 (695)
+..++. ++|++.+++. +||+++. .++|+.+.. + |+... ..+...+....-|||+|+ .+
T Consensus 35 ~~~~~~~~~~ld~~~~~~-~ly~sD~~~~~I~r~~~-~-g~~~~-------------~~v~~~~~~~P~GlAvD~---~~ 95 (619)
T 3s94_A 35 VVGGLEDAAAVDFVFSHG-LIYWSDVSEEAIKRTEF-N-KTESV-------------QNVVVSGLLSPDGLACDW---LG 95 (619)
T ss_dssp -CBCCSCEEEEEEETTTT-EEEEEETTTTEEEEEEC-------C-------------EEEECSSCSCEEEEEEET---TT
T ss_pred EEcCCCceEEEEEEeCCC-EEEEEECCCCeEEEEEc-c-CCCce-------------EEEEeCCCCCcCeEEEEe---cC
Confidence 444554 7899998553 8999996 588988763 2 32100 012223345678999997 37
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecC
Q 005466 287 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 366 (695)
Q Consensus 287 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~ 366 (695)
+.+|+.-+. ..+|.++..++. ..++++.
T Consensus 96 ~~ly~~d~~------------------------------------~~~I~v~~~dG~-------------~~~~l~~--- 123 (619)
T 3s94_A 96 EKLYWTDSE------------------------------------TNRIEVSNLDGS-------------LRKVLFW--- 123 (619)
T ss_dssp TEEEEEETT------------------------------------TTEEEEEETTSC-------------SCEEEEC---
T ss_pred CEEEEEeCC------------------------------------CCEEEEEECCCC-------------CEEEEEe---
Confidence 889886421 026766665432 2234432
Q ss_pred CCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCC
Q 005466 367 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 446 (695)
Q Consensus 367 P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~ 446 (695)
....+--.|+++|.+|+|||+- -+ + .++|.|++.||..
T Consensus 124 -~~l~~P~~Iavdp~~g~ly~tD--~g---------~-----~~~I~r~~~dG~~------------------------- 161 (619)
T 3s94_A 124 -QELDQPRAIALDPSSGFMYWTD--WG---------E-----VPKIERAGMDGSS------------------------- 161 (619)
T ss_dssp -SSCSCCCCEEEETTTTEEEEEE--CS---------S-----SCEEEEEETTSCS-------------------------
T ss_pred -CCCCCCceEEEecCCCeEEEec--cC---------C-----CCEEEEEECCCCc-------------------------
Confidence 1223445799999679999983 11 1 4789999999830
Q ss_pred CCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCcee
Q 005466 447 SGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEE 486 (695)
Q Consensus 447 ~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EE 486 (695)
+..+..-.+..|.++++|+.++ +||++|.+.+..+.
T Consensus 162 ---~~~l~~~~~~~P~Glald~~~~-~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 162 ---RFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHK 197 (619)
T ss_dssp ---CEEEECSSCSSEEEEEEETTTT-EEEEEETTTCCEEE
T ss_pred ---eEEEEeCCCCCCcEEEEEccCC-EEEEEeCCCCeEEE
Confidence 1234445788999999999876 79999988765433
No 30
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.028 Score=63.12 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=46.9
Q ss_pred cCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCC----c-ccccccCC-CC-CCCCCccceEEEcCC-CcEEEE
Q 005466 560 FGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDS----P-IQCKVLPG-ND-LPSLGYIYSFGEDNR-KDIFIL 631 (695)
Q Consensus 560 ~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~----P-~~c~~~~g-~~-~~~~gri~sf~ed~d-GeLYvl 631 (695)
.|.++++|....+|+.+. | .|.. ..+ .-.+.. | ..+-+..| .. ...+.++.+++.|++ |.|||.
T Consensus 390 ~g~lyVaD~~N~rIr~i~--~--~G~v--~Ti--aG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVa 461 (496)
T 3kya_A 390 EYDFYFVDRLNFCVRKVT--P--EGIV--STY--AGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVH 461 (496)
T ss_dssp CEEEEEEEGGGTEEEEEC--T--TCBE--EEE--EESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCEEEEEe--C--CCCE--EEE--ecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEE
Confidence 578999999999998885 3 3532 222 111110 0 00111122 11 123568999999997 999999
Q ss_pred eCC--eEEEEecCCC
Q 005466 632 TSD--GVYRVVRPSR 644 (695)
Q Consensus 632 ts~--gIYRIv~ps~ 644 (695)
+++ +|.||.....
T Consensus 462 D~~N~rIrki~~~~~ 476 (496)
T 3kya_A 462 DQVGHTIRTISMEQE 476 (496)
T ss_dssp ETTTTEEEEEEECCC
T ss_pred eCCCCEEEEEECCCC
Confidence 974 6888876443
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.64 E-value=0.0011 Score=64.68 Aligned_cols=148 Identities=14% Similarity=0.183 Sum_probs=89.7
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|++.+|| ++||++. .|.|++++ .++.... . ..........+|+++| +|++|+.-.
T Consensus 111 ~~i~~~~~g--~l~v~~~~~~~i~~~~---~~~~~~~-------~------~~~~~~~~p~~i~~~~----~g~l~v~~~ 168 (270)
T 1rwi_B 111 EGLAVDTQG--AVYVADRGNNRVVKLA---AGSKTQT-------V------LPFTGLNDPDGVAVDN----SGNVYVTDT 168 (270)
T ss_dssp EEEEECTTC--CEEEEEGGGTEEEEEC---TTCCSCE-------E------CCCCSCCSCCCEEECT----TCCEEEEEG
T ss_pred cceEECCCC--CEEEEECCCCEEEEEE---CCCceeE-------e------eccccCCCceeEEEeC----CCCEEEEEC
Confidence 789999998 7999985 68898873 2221110 0 0111224568899997 577888643
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcccc
Q 005466 295 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 374 (695)
Q Consensus 295 ~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~GG 374 (695)
.. .+|.+|..++. ... .. . ........
T Consensus 169 ~~------------------------------------~~i~~~~~~~~-------------~~~-~~--~-~~~~~~p~ 195 (270)
T 1rwi_B 169 DN------------------------------------NRVVKLEAESN-------------NQV-VL--P-FTDITAPW 195 (270)
T ss_dssp GG------------------------------------TEEEEECTTTC-------------CEE-EC--C-CSSCCSEE
T ss_pred CC------------------------------------CEEEEEecCCC-------------ceE-ee--c-ccCCCCce
Confidence 11 25666653211 111 11 0 11113345
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.+++ ||.|||+... .++|.+++.++.. + ..+-
T Consensus 196 ~i~~d~-~g~l~v~~~~-----------------~~~v~~~~~~~~~---------------~-------------~~~~ 229 (270)
T 1rwi_B 196 GIAVDE-AGTVYVTEHN-----------------TNQVVKLLAGSTT---------------S-------------TVLP 229 (270)
T ss_dssp EEEECT-TCCEEEEETT-----------------TSCEEEECTTCSC---------------C-------------EECC
T ss_pred EEEECC-CCCEEEEECC-----------------CCcEEEEcCCCCc---------------c-------------eeec
Confidence 699999 9999998743 2458999887720 0 0011
Q ss_pred EeccccceeeeecCCCCCeEEEEEccCCCcee
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEE 486 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EE 486 (695)
.-|+.+|.++++|+. | +||++|.+.+....
T Consensus 230 ~~~~~~p~~i~~~~~-g-~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 230 FTGLNTPLAVAVDSD-R-TVYVADRGNDRVVK 259 (270)
T ss_dssp CCSCSCEEEEEECTT-C-CEEEEEGGGTEEEE
T ss_pred cCCCCCceeEEECCC-C-CEEEEECCCCEEEE
Confidence 124688999999987 4 59999998765333
No 32
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.50 E-value=0.0039 Score=66.75 Aligned_cols=158 Identities=14% Similarity=0.199 Sum_probs=98.7
Q ss_pred EecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCC
Q 005466 210 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 286 (695)
Q Consensus 210 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~N 286 (695)
+..++. .+|++.+.+. +||+++. .++|+++++ + |+... .+...+....-|||+|| .+
T Consensus 154 ~~~~~~~p~glavd~~~g-~lY~~d~~~~~I~~~~~-d-g~~~~--------------~l~~~~l~~P~giavdp---~~ 213 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHD-KLYWTDSGTSRIEVANL-D-GAHRK--------------VLLWQSLEKPRAIALHP---ME 213 (386)
T ss_dssp ECSSCSCCCCEEEETTTT-EEEEEETTTTEEEECBT-T-SCSCE--------------EEECSSCSCEEEEEEET---TT
T ss_pred EeCCCCCccEEEEEeCCC-eEEEEcCCCCeEEEEeC-C-CCceE--------------EeecCCCCCCcEEEEEc---CC
Confidence 345654 6788887553 7999986 578887653 2 32111 11112234568999998 47
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecC
Q 005466 287 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 366 (695)
Q Consensus 287 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~ 366 (695)
|++|++-... ..+|.|+..++. ..+++...
T Consensus 214 g~ly~td~~~-----------------------------------~~~I~r~~~dG~-------------~~~~~~~~-- 243 (386)
T 3v65_B 214 GTIYWTDWGN-----------------------------------TPRIEASSMDGS-------------GRRIIADT-- 243 (386)
T ss_dssp TEEEEEECSS-----------------------------------SCEEEEEETTSC-------------SCEEEECS--
T ss_pred CeEEEeccCC-----------------------------------CCEEEEEeCCCC-------------CcEEEEEC--
Confidence 8888763210 137777775432 22334321
Q ss_pred CCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCC
Q 005466 367 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 446 (695)
Q Consensus 367 P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~ 446 (695)
..+.--.|.|+|.++.|||+-. ..++|.|+|.||.
T Consensus 244 --~~~~PnGlavd~~~~~lY~aD~-----------------~~~~I~~~d~dG~-------------------------- 278 (386)
T 3v65_B 244 --HLFWPNGLTIDYAGRRMYWVDA-----------------KHHVIERANLDGS-------------------------- 278 (386)
T ss_dssp --SCSCEEEEEEEGGGTEEEEEET-----------------TTTEEEEECTTSC--------------------------
T ss_pred --CCCCeeeEEEeCCCCEEEEEEC-----------------CCCEEEEEeCCCC--------------------------
Confidence 2234456999975789999831 2468999999872
Q ss_pred CCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeE
Q 005466 447 SGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 487 (695)
Q Consensus 447 ~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEI 487 (695)
.+..+...++..|.+++++.+ .||++|.+.+....+
T Consensus 279 --~~~~~~~~~~~~P~giav~~~---~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 279 --HRKAVISQGLPHPFAITVFED---SLYWTDWHTKSINSA 314 (386)
T ss_dssp --SCEEEECSSCSSEEEEEEETT---EEEEEETTTTEEEEE
T ss_pred --eeEEEEECCCCCceEEEEECC---EEEEeeCCCCeEEEE
Confidence 123456667899999999643 699999876543333
No 33
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.50 E-value=0.014 Score=59.01 Aligned_cols=166 Identities=16% Similarity=0.194 Sum_probs=97.1
Q ss_pred EEEEEecCce--eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 206 CLEKIGNGSY--LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 206 ~le~va~Gl~--~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
.++.+..+.. .++++.||| ++|++. ..|.|++++ ++.+ +.. .+.........+|+++|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~i~~~d-~~~~--~~~-------------~~~~~~~~~~~~i~~~~- 96 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQG--QLFLLDVFEGNIFKIN-PETK--EIK-------------RPFVSHKANPAAIKIHK- 96 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTS--CEEEEETTTCEEEEEC-TTTC--CEE-------------EEEECSSSSEEEEEECT-
T ss_pred eeEEEeccCccccCcEECCCC--CEEEEECCCCEEEEEe-CCCC--cEE-------------EEeeCCCCCcceEEECC-
Confidence 3444544433 678899999 699876 468899885 3322 111 01112234678999997
Q ss_pred CCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEE
Q 005466 283 FAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIF 362 (695)
Q Consensus 283 F~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il 362 (695)
+|++|+.-..+.. ....|.+|..+. ...+.++
T Consensus 97 ---dg~l~v~~~~~~~--------------------------------~~~~i~~~d~~~-------------~~~~~~~ 128 (333)
T 2dg1_A 97 ---DGRLFVCYLGDFK--------------------------------STGGIFAATENG-------------DNLQDII 128 (333)
T ss_dssp ---TSCEEEEECTTSS--------------------------------SCCEEEEECTTS-------------CSCEEEE
T ss_pred ---CCcEEEEeCCCCC--------------------------------CCceEEEEeCCC-------------CEEEEEE
Confidence 5788886432100 012565664321 1223333
Q ss_pred EecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCC
Q 005466 363 TMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNP 442 (695)
Q Consensus 363 ~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNP 442 (695)
.. ......-..|.|.| ||.||++...+.. ....++|+|+|.++.
T Consensus 129 ~~--~~~~~~~~~i~~d~-~g~l~v~~~~~~~-----------~~~~~~l~~~~~~~~---------------------- 172 (333)
T 2dg1_A 129 ED--LSTAYCIDDMVFDS-KGGFYFTDFRGYS-----------TNPLGGVYYVSPDFR---------------------- 172 (333)
T ss_dssp CS--SSSCCCEEEEEECT-TSCEEEEECCCBT-----------TBCCEEEEEECTTSC----------------------
T ss_pred cc--CccCCcccceEECC-CCCEEEEeccccc-----------cCCCceEEEEeCCCC----------------------
Confidence 21 11122334689999 9999998754211 123689999998751
Q ss_pred CCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCC
Q 005466 443 FSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQD 482 (695)
Q Consensus 443 F~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d 482 (695)
..+.+..++..|.+++|++.. ..||+++.+.+
T Consensus 173 -------~~~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~ 204 (333)
T 2dg1_A 173 -------TVTPIIQNISVANGIALSTDE-KVLWVTETTAN 204 (333)
T ss_dssp -------CEEEEEEEESSEEEEEECTTS-SEEEEEEGGGT
T ss_pred -------EEEEeecCCCcccceEECCCC-CEEEEEeCCCC
Confidence 112344566788999999974 36999886543
No 34
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.46 E-value=0.0058 Score=64.45 Aligned_cols=159 Identities=13% Similarity=0.188 Sum_probs=99.1
Q ss_pred EecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCC
Q 005466 210 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 286 (695)
Q Consensus 210 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~N 286 (695)
+..++. .+|++.+.+. +||+++. .++|+++++ + |+... .+...+....-|||+|| .+
T Consensus 111 ~~~~~~~p~glavd~~~g-~ly~~d~~~~~I~~~~~-d-G~~~~--------------~l~~~~l~~P~~iavdp---~~ 170 (349)
T 3v64_C 111 VSTGLESPGGLAVDWVHD-KLYWTDSGTSRIEVANL-D-GAHRK--------------VLLWQSLEKPRAIALHP---ME 170 (349)
T ss_dssp ECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSCE--------------EEECTTCSCEEEEEEET---TT
T ss_pred EeCCCCCccEEEEecCCC-eEEEEcCCCCeEEEEcC-C-CCceE--------------EEEeCCCCCcceEEEec---Cc
Confidence 344554 6788887553 7999996 578888763 2 32111 01112234568999998 47
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecC
Q 005466 287 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 366 (695)
Q Consensus 287 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~ 366 (695)
|++|++-... ..+|.|+..++. ..++++.
T Consensus 171 g~ly~td~~~-----------------------------------~~~I~r~~~dG~-------------~~~~~~~--- 199 (349)
T 3v64_C 171 GTIYWTDWGN-----------------------------------TPRIEASSMDGS-------------GRRIIAD--- 199 (349)
T ss_dssp TEEEEEECSS-----------------------------------SCEEEEEETTSC-------------SCEESCC---
T ss_pred CeEEEeccCC-----------------------------------CCEEEEEeCCCC-------------CcEEEEE---
Confidence 8888763210 137777775432 1222221
Q ss_pred CCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCC
Q 005466 367 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 446 (695)
Q Consensus 367 P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~ 446 (695)
...+.--.|.|+|.++.|||+-. ..++|.|+|.||.
T Consensus 200 -~~~~~PnGla~d~~~~~lY~aD~-----------------~~~~I~~~~~dG~-------------------------- 235 (349)
T 3v64_C 200 -THLFWPNGLTIDYAGRRMYWVDA-----------------KHHVIERANLDGS-------------------------- 235 (349)
T ss_dssp -SSCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC--------------------------
T ss_pred -CCCCCcceEEEeCCCCEEEEEEC-----------------CCCEEEEEeCCCC--------------------------
Confidence 12234456999975789999731 2468999999882
Q ss_pred CCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 447 SGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 447 ~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
.+..+...++..|.+++++. + +||++|-+.+....++
T Consensus 236 --~~~~~~~~~~~~P~giav~~--~-~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 236 --HRKAVISQGLPHPFAITVFE--D-SLYWTDWHTKSINSAN 272 (349)
T ss_dssp --SCEEEECSSCSSEEEEEEET--T-EEEEEETTTTEEEEEE
T ss_pred --ceEEEEeCCCCCceEEEEEC--C-EEEEecCCCCeEEEEE
Confidence 12345566789999999964 2 6999998876544443
No 35
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.45 E-value=0.0029 Score=64.15 Aligned_cols=62 Identities=15% Similarity=0.235 Sum_probs=45.2
Q ss_pred cceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecC-CCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCe
Q 005466 374 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVD-NIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPE 452 (695)
Q Consensus 374 G~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvD-g~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pE 452 (695)
-.|.+++ ||.|||+.-+ .|+|.|+|++ |. .-+
T Consensus 202 ~g~~~d~-~G~lwva~~~-----------------~~~v~~~d~~tG~-----------------------------~~~ 234 (297)
T 3g4e_A 202 DGMCIDA-EGKLWVACYN-----------------GGRVIRLDPVTGK-----------------------------RLQ 234 (297)
T ss_dssp EEEEEBT-TSCEEEEEET-----------------TTEEEEECTTTCC-----------------------------EEE
T ss_pred CeeEECC-CCCEEEEEcC-----------------CCEEEEEcCCCce-----------------------------EEE
Confidence 3599999 9999998754 2469999987 42 123
Q ss_pred EEEeccccceeeeec-CCCCCeEEEEEccCCC
Q 005466 453 IWALGLRNPWRCSFD-SDRPSYFMCADVGQDV 483 (695)
Q Consensus 453 I~A~GlRNP~r~sfD-~~~g~~l~~~DvG~d~ 483 (695)
.+..+.++|..|+|. +. +++||++......
T Consensus 235 ~i~~p~~~~t~~~f~g~d-~~~L~vt~~~~~~ 265 (297)
T 3g4e_A 235 TVKLPVDKTTSCCFGGKN-YSEMYVTCARDGM 265 (297)
T ss_dssp EEECSSSBEEEEEEESGG-GCEEEEEEBCTTC
T ss_pred EEECCCCCceEEEEeCCC-CCEEEEEcCCcCC
Confidence 456666889999998 54 3479999876543
No 36
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.43 E-value=0.0049 Score=70.62 Aligned_cols=160 Identities=18% Similarity=0.198 Sum_probs=102.6
Q ss_pred cCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCE
Q 005466 212 NGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 288 (695)
Q Consensus 212 ~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~ 288 (695)
.++. ++|++.+.+. +||+++. .++|+.+.. + |+... .+...+-...-|||+|+ .++.
T Consensus 346 ~~l~~~~~ld~d~~~~-~ly~sD~~~~~I~r~~~-~-g~~~~--------------~v~~~~~~~p~GlAvD~---~~~~ 405 (619)
T 3s94_A 346 EDIRHAIAIDYDPVEG-YIYWTDDEVRAIRRSFI-D-GSGSQ--------------FVVTAQIAHPDGIAVDW---VARN 405 (619)
T ss_dssp SCCSSEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSCCCEEEEET---TTTE
T ss_pred cccCccEEEEEEcCCC-eEEEEeCCCCeEEEEEc-C-CCccE--------------EEEECCCCCcCceEEec---ccCc
Confidence 4454 7899987432 8999996 688988763 3 33211 11122334567999986 3678
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCC
Q 005466 289 FFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSF 368 (695)
Q Consensus 289 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~ 368 (695)
+|+.-+. ..+|.+.+.++. ..++++..
T Consensus 406 lY~tD~~------------------------------------~~~I~v~~~~G~-------------~~~~l~~~---- 432 (619)
T 3s94_A 406 LYWTDTG------------------------------------TDRIEVTRLNGT-------------MRKILISE---- 432 (619)
T ss_dssp EEEEETT------------------------------------TTEEEEEETTSC-------------SCEEEECT----
T ss_pred EEEEeCC------------------------------------CCcEEEEeCCCC-------------eEEEEEEC----
Confidence 8886321 025655554332 22334321
Q ss_pred CCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCC
Q 005466 369 NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSG 448 (695)
Q Consensus 369 ~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~ 448 (695)
....--.|++.|..|+|||+- -+ + .++|.|++.||..
T Consensus 433 ~l~~P~~iavdp~~G~ly~tD--~g---------~-----~~~I~r~~~dG~~--------------------------- 469 (619)
T 3s94_A 433 DLEEPRAIVLDPMVGYMYWTD--WG---------E-----IPKIERAALDGSD--------------------------- 469 (619)
T ss_dssp TCCSEEEEEEETTTTEEEEEE--CS---------S-----SCEEEEEETTSCS---------------------------
T ss_pred CCCCeeeEEEEcCCCcEEEec--CC---------C-----CCEEEEEccCCCc---------------------------
Confidence 234456799999569999974 11 0 4789999999830
Q ss_pred CCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEE
Q 005466 449 LQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDI 489 (695)
Q Consensus 449 ~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~ 489 (695)
+..+..-++..|.++++|+..+ +||++|.+.+..+.+++
T Consensus 470 -~~~l~~~~l~~P~GlalD~~~~-~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 470 -RVVLVNTSLGWPNGLALDYDEG-KIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp -CEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEES
T ss_pred -cEEEEeCCCCCCeeeEEcccCC-EEEEEECCCCEEEEEec
Confidence 1234445789999999999776 79999999877666664
No 37
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.43 E-value=0.0072 Score=71.42 Aligned_cols=156 Identities=14% Similarity=0.198 Sum_probs=96.7
Q ss_pred Cce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEE
Q 005466 213 GSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRF 289 (695)
Q Consensus 213 Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~ 289 (695)
++. .+||+.+.+. +||+++. .++|+++++ +|.... .+.........|||+|| .+|+|
T Consensus 469 ~l~~P~GLAvD~~~~-~LY~tD~~~~~I~v~~l--dG~~~~--------------~l~~~~l~~P~gIaVDp---~~g~L 528 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT--KGVKRK--------------TLFRENGSKPRAIVVDP---VHGFM 528 (791)
T ss_dssp SCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSSSEE--------------EEEECTTCCEEEEEEET---TTTEE
T ss_pred CCCCcceeeeeecCC-cEEEEecCCCeEEEEeC--CCCeEE--------------EEEeCCCCCcceEEEec---CCCCE
Confidence 554 6788887664 7999996 588888764 233111 11112334478999998 47888
Q ss_pred EEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCC
Q 005466 290 FASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFN 369 (695)
Q Consensus 290 YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~ 369 (695)
|++-... ..+|.++..++. ..++|+.. .
T Consensus 529 YwtD~g~-----------------------------------~~~I~~~~~dG~-------------~~~~lv~~----~ 556 (791)
T 3m0c_C 529 YWTDWGT-----------------------------------PAKIKKGGLNGV-------------DIYSLVTE----N 556 (791)
T ss_dssp EEEECSS-----------------------------------SCEEEEEETTSC-------------CEEEEECS----S
T ss_pred EEecCCC-----------------------------------CCeEEEEecCCC-------------ceEEEEeC----C
Confidence 8753210 126777765432 23344431 1
Q ss_pred CccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCC
Q 005466 370 GHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGL 449 (695)
Q Consensus 370 ~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~ 449 (695)
..+--.|++++.+|.|||+ |. ...+|.|++.||..
T Consensus 557 l~~P~GLavD~~~~~LYwa--D~---------------~~~~I~~~d~dG~~---------------------------- 591 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWV--DS---------------KLHSISSIDVNGGN---------------------------- 591 (791)
T ss_dssp CSCEEEEEEETTTTEEEEE--ET---------------TTTEEEEEETTSCS----------------------------
T ss_pred CCCceEEEEecCCCeEEEE--eC---------------CCCcEEEEecCCCc----------------------------
Confidence 2344569999768999998 32 13579999999830
Q ss_pred CCeEEEe--ccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 450 QPEIWAL--GLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 450 ~pEI~A~--GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
+..|..- .+.+|++++++.. +||++|.+.+....+|
T Consensus 592 ~~~v~~~~~~l~~P~glav~~~---~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 592 RKTILEDEKRLAHPFSLAVFED---KVFWTDIINEAIFSAN 629 (791)
T ss_dssp CEEEEECTTTTSSEEEEEEETT---EEEEEETTTTEEEEEE
T ss_pred eEEEecCCCccCCCCEEEEeCC---EEEEEECCCCEEEEEe
Confidence 1223332 4789999998653 6999998776544444
No 38
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.43 E-value=0.01 Score=58.83 Aligned_cols=152 Identities=13% Similarity=0.125 Sum_probs=94.6
Q ss_pred cCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCE
Q 005466 212 NGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 288 (695)
Q Consensus 212 ~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~ 288 (695)
.++. ..|++.+++. ++||++. .++|++++. + |.... .+...+....-+||+||+ +++
T Consensus 76 ~~~~~p~~ia~d~~~~-~lyv~d~~~~~I~~~~~-~-g~~~~--------------~~~~~~~~~P~~i~vd~~---~g~ 135 (267)
T 1npe_A 76 QDLGSPEGIALDHLGR-TIFWTDSQLDRIEVAKM-D-GTQRR--------------VLFDTGLVNPRGIVTDPV---RGN 135 (267)
T ss_dssp TTCCCEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSSEEEEEEETT---TTE
T ss_pred CCCCCccEEEEEecCC-eEEEEECCCCEEEEEEc-C-CCCEE--------------EEEECCCCCccEEEEeeC---CCE
Confidence 4543 7899998753 7999996 578988763 2 32110 111112346789999984 689
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCC
Q 005466 289 FFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSF 368 (695)
Q Consensus 289 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~ 368 (695)
+|+.-... . ..+|.++..++. ..+++...
T Consensus 136 lyv~~~~~--------------------------~--------~~~I~~~~~dg~-------------~~~~~~~~---- 164 (267)
T 1npe_A 136 LYWTDWNR--------------------------D--------NPKIETSHMDGT-------------NRRILAQD---- 164 (267)
T ss_dssp EEEEECCS--------------------------S--------SCEEEEEETTSC-------------CCEEEECT----
T ss_pred EEEEECCC--------------------------C--------CcEEEEEecCCC-------------CcEEEEEC----
Confidence 99864210 0 126767765332 12233221
Q ss_pred CCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCC
Q 005466 369 NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSG 448 (695)
Q Consensus 369 ~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~ 448 (695)
...+...|.|+|..++|||+--. .++|.+++.++.
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~---------------------------- 199 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAG-----------------THRAECLNPAQP---------------------------- 199 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTEE----------------------------
T ss_pred CCCCCcEEEEcCCCCEEEEEECC-----------------CCEEEEEecCCC----------------------------
Confidence 12345579999933699997532 357999998872
Q ss_pred CCCeEEEeccccceeeeecCCCCCeEEEEEccCCC
Q 005466 449 LQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 449 ~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
..+.+.-++..|.++++|. + +||++|.+.+.
T Consensus 200 -~~~~~~~~~~~P~gi~~d~--~-~lyva~~~~~~ 230 (267)
T 1npe_A 200 -GRRKVLEGLQYPFAVTSYG--K-NLYYTDWKTNS 230 (267)
T ss_dssp -EEEEEEECCCSEEEEEEET--T-EEEEEETTTTE
T ss_pred -ceEEEecCCCCceEEEEeC--C-EEEEEECCCCe
Confidence 1133445789999999983 3 69999988653
No 39
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.35 E-value=0.0077 Score=65.77 Aligned_cols=30 Identities=17% Similarity=0.371 Sum_probs=23.8
Q ss_pred cccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 458 LRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 458 lRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
|..|+++++|+.++ .||++|.+-+..-.|.
T Consensus 401 ~~~P~giavd~~~g-~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 401 FNHPTSIAYDMKRK-CFYIGDCDNHRVRKIA 430 (433)
T ss_dssp CSSEEEEEEETTTT-EEEEEEGGGTEEEEEE
T ss_pred eCCCcEEEEECCCC-EEEEEeCCCCEEEEEe
Confidence 78899999997666 6999999876544443
No 40
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.34 E-value=0.016 Score=60.59 Aligned_cols=158 Identities=11% Similarity=0.147 Sum_probs=97.7
Q ss_pred EEecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCC
Q 005466 209 KIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAK 285 (695)
Q Consensus 209 ~va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~ 285 (695)
.+..++. .+|++.+.+. +||+++. .++|+++++ + |+... .+........-|||+|| .
T Consensus 73 ~~~~~l~~p~glavd~~~g-~ly~~d~~~~~I~~~~~-d-G~~~~--------------~l~~~~~~~P~giavdp---~ 132 (318)
T 3sov_A 73 VVVSGLLSPDGLACDWLGE-KLYWTDSETNRIEVSNL-D-GSLRK--------------VLFWQELDQPRAIALDP---S 132 (318)
T ss_dssp EEEECCSCCCEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSSEEEEEEEG---G
T ss_pred EEcCCCCCccEEEEEcCCC-eEEEEECCCCEEEEEEC-C-CCcEE--------------EEEeCCCCCccEEEEeC---C
Confidence 3445554 6788887543 7999986 578888763 2 32111 01112234568999998 4
Q ss_pred CCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEec
Q 005466 286 NGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMG 365 (695)
Q Consensus 286 Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~ 365 (695)
+|++|++-... ..+|.|+..++. ..++++..+
T Consensus 133 ~g~ly~td~~~-----------------------------------~~~I~r~~~dG~-------------~~~~~~~~~ 164 (318)
T 3sov_A 133 SGFMYWTDWGE-----------------------------------VPKIERAGMDGS-------------SRFIIINSE 164 (318)
T ss_dssp GTEEEEEECSS-----------------------------------SCEEEEEETTSC-------------SCEEEECSS
T ss_pred CCEEEEEecCC-----------------------------------CCEEEEEEcCCC-------------CeEEEEECC
Confidence 68888753210 137777765432 223443321
Q ss_pred CCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCC
Q 005466 366 LSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSE 445 (695)
Q Consensus 366 ~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~ 445 (695)
...--.|.|+|.++.||++-. ..++|.|+|.||.
T Consensus 165 ----l~~Pnglavd~~~~~lY~aD~-----------------~~~~I~~~d~dG~------------------------- 198 (318)
T 3sov_A 165 ----IYWPNGLTLDYEEQKLYWADA-----------------KLNFIHKSNLDGT------------------------- 198 (318)
T ss_dssp ----CSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC-------------------------
T ss_pred ----CCCccEEEEeccCCEEEEEEC-----------------CCCEEEEEcCCCC-------------------------
Confidence 233457999985789999731 2568999999882
Q ss_pred CCCCCCeEEEe-ccccceeeeecCCCCCeEEEEEccCCCceeE
Q 005466 446 DSGLQPEIWAL-GLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 487 (695)
Q Consensus 446 ~~~~~pEI~A~-GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEI 487 (695)
..+++.. ++..|.++++|.+ .+|++|.+......+
T Consensus 199 ----~~~~~~~~~~~~P~glav~~~---~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 199 ----NRQAVVKGSLPHPFALTLFED---ILYWTDWSTHSILAC 234 (318)
T ss_dssp ----SCEEEECSCCSCEEEEEEETT---EEEEEETTTTEEEEE
T ss_pred ----ceEEEecCCCCCceEEEEeCC---EEEEEecCCCeEEEE
Confidence 1233433 6889999999853 588999877543333
No 41
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.30 E-value=0.014 Score=67.10 Aligned_cols=157 Identities=14% Similarity=0.188 Sum_probs=101.9
Q ss_pred EecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCC
Q 005466 210 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 286 (695)
Q Consensus 210 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~N 286 (695)
+..|+. .+||..+.+. +||+++. .++|+++++ +|+.... +....-....+||+|| .+
T Consensus 75 ~~~g~~~P~GlAvD~~~~-~LY~tD~~~~~I~v~~~--dG~~~~~--------------l~~~~l~~P~~iavdp---~~ 134 (628)
T 4a0p_A 75 VEFGLDYPEGMAVDWLGK-NLYWADTGTNRIEVSKL--DGQHRQV--------------LVWKDLDSPRALALDP---AE 134 (628)
T ss_dssp ECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSTTCEE--------------EECSSCCCEEEEEEET---TT
T ss_pred EeCCCCCcceEEEEeCCC-EEEEEECCCCEEEEEec--CCCcEEE--------------EEeCCCCCcccEEEcc---CC
Confidence 334554 6788877653 7999997 588998864 2432110 1112234578999998 48
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecC
Q 005466 287 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 366 (695)
Q Consensus 287 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~ 366 (695)
|++|++-.. . ..+|.|+..++. +.++|++
T Consensus 135 G~lY~tD~g---~--------------------------------~~~I~r~~~dG~-------------~~~~l~~--- 163 (628)
T 4a0p_A 135 GFMYWTEWG---G--------------------------------KPKIDRAAMDGS-------------ERTTLVP--- 163 (628)
T ss_dssp TEEEEEECS---S--------------------------------SCEEEEEETTSC-------------SCEEEEC---
T ss_pred CeEEEeCCC---C--------------------------------CCEEEEEeCCCC-------------ceEEEEC---
Confidence 888875320 0 127877776442 3344442
Q ss_pred CCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCC
Q 005466 367 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 446 (695)
Q Consensus 367 P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~ 446 (695)
...+--.|.+++..+.|||+-. ..++|.|+|.||.
T Consensus 164 --~~~~P~GlalD~~~~~LY~aD~-----------------~~~~I~~~d~dG~-------------------------- 198 (628)
T 4a0p_A 164 --NVGRANGLTIDYAKRRLYWTDL-----------------DTNLIESSNMLGL-------------------------- 198 (628)
T ss_dssp --SCSSEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC--------------------------
T ss_pred --CCCCcceEEEccccCEEEEEEC-----------------CCCEEEEEcCCCC--------------------------
Confidence 1234456999985589999752 2457999999882
Q ss_pred CCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 447 SGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 447 ~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
..++.+-++..|++++++.+ +||++|-+.+....+|
T Consensus 199 ---~~~v~~~~l~~P~glav~~~---~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 199 ---NREVIADDLPHPFGLTQYQD---YIYWTDWSRRSIERAN 234 (628)
T ss_dssp ---SCEEEEECCSCEEEEEEETT---EEEEEETTTTEEEEEE
T ss_pred ---ceEEeeccCCCceEEEEECC---EEEEecCCCCEEEEEE
Confidence 12788889999999999862 6999997665443333
No 42
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.0078 Score=65.56 Aligned_cols=30 Identities=17% Similarity=0.363 Sum_probs=23.7
Q ss_pred cccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 458 LRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 458 lRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
|..|+++++|+.++ .||++|.+-+..-.|.
T Consensus 398 ~~~P~giavd~~~g-~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 398 FNHPEGIVYDEERE-CFFIGDRENRRIRKIG 427 (430)
T ss_dssp CSSEEEEEEETTTT-EEEEEEGGGTEEEEEE
T ss_pred eCCCcEEEEECCCC-EEEEEECCCCeEEEEc
Confidence 67999999999656 6999999876544443
No 43
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.29 E-value=0.029 Score=55.39 Aligned_cols=70 Identities=14% Similarity=0.141 Sum_probs=42.7
Q ss_pred CCcEEEEEecC-c--eeeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceee-CCCCceeee
Q 005466 203 QGLCLEKIGNG-S--YLNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHF-DTEFGLMGM 277 (695)
Q Consensus 203 ~G~~le~va~G-l--~~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~-~~E~GLLGi 277 (695)
.|-.++.+..+ + ...|++.||| ++||++. .++|++++ ++ + +.+. .+.. .......+|
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~-~~-g--~~~~------------~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKG--RIIVVECKVMRVIIFD-QN-G--NVLH------------KFGCSKHLEFPNGV 169 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTS--CEEEEETTTTEEEEEC-TT-S--CEEE------------EEECTTTCSSEEEE
T ss_pred CCcEEEEecCccCCCceEEEEeCCC--CEEEEECCCCEEEEEc-CC-C--CEEE------------EeCCCCccCCcEEE
Confidence 34344555432 2 2789999999 7999985 68899875 22 2 2221 0100 122357899
Q ss_pred eeCCCCCCCCEEEEEEe
Q 005466 278 AFHPNFAKNGRFFASFN 294 (695)
Q Consensus 278 AfhPdF~~Ng~~YvsYs 294 (695)
+++| +|.+||.-+
T Consensus 170 ~~~~----~g~l~v~~~ 182 (286)
T 1q7f_A 170 VVND----KQEIFISDN 182 (286)
T ss_dssp EECS----SSEEEEEEG
T ss_pred EECC----CCCEEEEEC
Confidence 9998 588988643
No 44
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.28 E-value=0.13 Score=53.27 Aligned_cols=71 Identities=28% Similarity=0.293 Sum_probs=43.8
Q ss_pred EEEEEecCc-e-eeEEEcCCCCceEEEEe-e--Cc--eEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeee
Q 005466 206 CLEKIGNGS-Y-LNMVAHPDGSNRAFFSN-Q--EG--KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMA 278 (695)
Q Consensus 206 ~le~va~Gl-~-~~m~~~pDGs~RlfV~E-q--~G--~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiA 278 (695)
.+|+|++.. . .++++.||| |+||+. + .| +||.++ +| + + .+|-+.... .........||+
T Consensus 8 ~~~~v~~~~~~p~~va~~~~g--~~~v~~~~~~~~~~~l~~~~---~g--~-~-----~~~p~~~~~-~~~~~~~p~gv~ 73 (343)
T 2qe8_A 8 RLEVVAELSLAPGNITLTPDG--RLFLSLHQFYQPEMQVAELT---QD--G-L-----IPFPPQSGN-AIITFDTVLGIK 73 (343)
T ss_dssp CCEEEEEESSCEEEEEECTTS--CEEEEECGGGCCSCSEEEEE---TT--E-E-----EESCCCCSS-CCCCCSCEEEEE
T ss_pred eeEEEEEcCCCcceEEECCCC--CEEEEeCCCCCCceEEEEEC---CC--C-e-----ecCCCcccC-cccceeEeeEEE
Confidence 456677554 2 889999999 899996 2 35 677764 23 2 2 133222110 112234678999
Q ss_pred eCCCCCCCCEEEEEEe
Q 005466 279 FHPNFAKNGRFFASFN 294 (695)
Q Consensus 279 fhPdF~~Ng~~YvsYs 294 (695)
++| +|++||.-+
T Consensus 74 ~d~----~g~L~v~D~ 85 (343)
T 2qe8_A 74 SDG----NGIVWMLDN 85 (343)
T ss_dssp ECS----SSEEEEEEC
T ss_pred EcC----CCcEEEEcC
Confidence 997 588998754
No 45
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.27 E-value=0.2 Score=50.80 Aligned_cols=63 Identities=30% Similarity=0.478 Sum_probs=40.2
Q ss_pred EEEEecCce-eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCC
Q 005466 207 LEKIGNGSY-LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 284 (695)
Q Consensus 207 le~va~Gl~-~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~ 284 (695)
+..+..|.. .++++.+|| ++||++ ..|+|+.++ ++ +. ... ++ .......|||++|
T Consensus 25 ~~~~p~~~~pegia~~~~g--~lyv~d~~~~~I~~~d-~~-g~--~~~------~~--------~~~~~p~gia~~~--- 81 (306)
T 2p4o_A 25 ITSFPVNTFLENLASAPDG--TIFVTNHEVGEIVSIT-PD-GN--QQI------HA--------TVEGKVSGLAFTS--- 81 (306)
T ss_dssp EEEECTTCCEEEEEECTTS--CEEEEETTTTEEEEEC-TT-CC--EEE------EE--------ECSSEEEEEEECT---
T ss_pred eEeCCCCCCcceEEECCCC--CEEEEeCCCCeEEEEC-CC-Cc--eEE------EE--------eCCCCceeEEEcC---
Confidence 334433333 789999998 799999 478999875 33 21 111 11 1123578999997
Q ss_pred CCCEEEEEE
Q 005466 285 KNGRFFASF 293 (695)
Q Consensus 285 ~Ng~~YvsY 293 (695)
+|++||.-
T Consensus 82 -dG~l~vad 89 (306)
T 2p4o_A 82 -NGDLVATG 89 (306)
T ss_dssp -TSCEEEEE
T ss_pred -CCcEEEEe
Confidence 57788864
No 46
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.26 E-value=0.017 Score=61.96 Aligned_cols=77 Identities=13% Similarity=0.041 Sum_probs=53.9
Q ss_pred cccceEEcCCCCeEEEEecCCCCCCCccCc-ccc-CCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCC
Q 005466 372 HGGQLLFGPTDGYMYFMMGDGGGTADPYNF-SQN-KKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGL 449 (695)
Q Consensus 372 ~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~-aQn-~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~ 449 (695)
.--.+.+.+ ||.+|++.--- ..||... .+. .....|.|+|++++.
T Consensus 166 ~pND~~v~~-~G~fyvt~~~~--ftd~~~~~~e~~~~~~~g~vyr~d~~~------------------------------ 212 (355)
T 3sre_A 166 SVNDIVAVG-PEHFYATNDHY--FIDPYLKSWEMHLGLAWSFVTYYSPND------------------------------ 212 (355)
T ss_dssp SEEEEEEEE-TTEEEEEESCS--CSSHHHHHHHHHTTCCCEEEEEECTTC------------------------------
T ss_pred CCceEEEeC-CCCEEecCCcE--eCCcccccchhhccCCccEEEEEECCe------------------------------
Confidence 345789999 99999965322 2344211 111 134579999998632
Q ss_pred CCeEEEeccccceeeeecCCCCCeEEEEEccCCC
Q 005466 450 QPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 450 ~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
-++.+-|+..|-|++|+|+. .+||++|.+...
T Consensus 213 -~~~~~~~l~~pNGia~spDg-~~lYvadt~~~~ 244 (355)
T 3sre_A 213 -VRVVAEGFDFANGINISPDG-KYVYIAELLAHK 244 (355)
T ss_dssp -CEEEEEEESSEEEEEECTTS-SEEEEEEGGGTE
T ss_pred -EEEeecCCcccCcceECCCC-CEEEEEeCCCCe
Confidence 26789999999999999974 479999998754
No 47
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.19 E-value=0.029 Score=60.33 Aligned_cols=158 Identities=14% Similarity=0.194 Sum_probs=96.4
Q ss_pred EecCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCC
Q 005466 210 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 286 (695)
Q Consensus 210 va~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~N 286 (695)
+..++. .+|++.+.+. +||+++. .++|+++++ + |.... .+........-|||+||. +
T Consensus 154 ~~~~~~~p~glavD~~~~-~lY~~d~~~~~I~~~~~-~-g~~~~--------------~l~~~~~~~P~~iavdp~---~ 213 (400)
T 3p5b_L 154 ISRDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT-K-GVKRK--------------TLFRENGSKPRAIVVDPV---H 213 (400)
T ss_dssp ECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEECT-T-TCSEE--------------EEEECSSCCEEEEEEETT---T
T ss_pred EeCCCCCcccEEEEecCC-ceEEEECCCCeEEEEeC-C-CCceE--------------EEEeCCCCCcceEEEecc---c
Confidence 334555 7888887443 7999996 688988753 2 32111 111123344789999984 7
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecC
Q 005466 287 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 366 (695)
Q Consensus 287 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~ 366 (695)
|++|++-... ..+|.++..++. ..++++..
T Consensus 214 g~ly~td~~~-----------------------------------~~~I~~~~~dG~-------------~~~~~~~~-- 243 (400)
T 3p5b_L 214 GFMYWTDWGT-----------------------------------PAKIKKGGLNGV-------------DIYSLVTE-- 243 (400)
T ss_dssp TEEEEEECSS-----------------------------------SCCEEEEETTSC-------------SCEEEECS--
T ss_pred CeEEEEeCCC-----------------------------------CCEEEEEeCCCC-------------ccEEEEEC--
Confidence 8888753210 025666665432 23334321
Q ss_pred CCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCC
Q 005466 367 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 446 (695)
Q Consensus 367 P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~ 446 (695)
....--.|.|++.++.|||+ |. ...+|.|+|.||.
T Consensus 244 --~l~~P~glavd~~~~~lY~a--D~---------------~~~~I~~~d~dG~-------------------------- 278 (400)
T 3p5b_L 244 --NIQWPNGITLDLLSGRLYWV--DS---------------KLHSISSIDVNGG-------------------------- 278 (400)
T ss_dssp --SCSCEEEEEEETTTTEEEEE--ET---------------TTTEEEEEETTSC--------------------------
T ss_pred --CCCceEEEEEEeCCCEEEEE--EC---------------CCCEEEEEeCCCC--------------------------
Confidence 12344569999757899998 32 1467999999882
Q ss_pred CCCCCeEEEe---ccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 447 SGLQPEIWAL---GLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 447 ~~~~pEI~A~---GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
..+++.. .+..|.+++++.+ +||++|.+.+....+|
T Consensus 279 ---~~~~~~~~~~~l~~P~gl~v~~~---~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 279 ---NRKTILEDEKRLAHPFSLAVFED---KVFWTDIINEAIFSAN 317 (400)
T ss_dssp ---CCEEEEECSSTTSSEEEEEEETT---EEEEEESSSCSEEEEE
T ss_pred ---ccEEEEeCCCCCCCCEEEEEeCC---EEEEecCCCCeEEEEE
Confidence 1233333 4789999999653 6999997765544444
No 48
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.17 E-value=0.031 Score=57.73 Aligned_cols=151 Identities=13% Similarity=0.168 Sum_probs=93.5
Q ss_pred cCce--eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCE
Q 005466 212 NGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 288 (695)
Q Consensus 212 ~Gl~--~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~ 288 (695)
.++. .+|++.+.+. +||+++. .++|.++++ + |.. .+ .+........-|||+|| .+|+
T Consensus 74 ~~~~~p~glavd~~~~-~ly~~d~~~~~I~~~~~-~-g~~--~~------------~~~~~~~~~P~~iavdp---~~g~ 133 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT-K-GVK--RK------------TLFRENGSKPRAIVVDP---VHGF 133 (316)
T ss_dssp SSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET-T-SSS--EE------------EEEECTTCCEEEEEEET---TTTE
T ss_pred CCCCCcCEEEEeecCC-eEEEEECCCCEEEEEeC-C-CCc--eE------------EEEECCCCCcceEEeCC---CCCE
Confidence 3443 6788876543 7999986 688988763 2 321 10 01112334578999998 4788
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCC
Q 005466 289 FFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSF 368 (695)
Q Consensus 289 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~ 368 (695)
+|++-... ..+|.++..++. ..+++...
T Consensus 134 ly~~d~~~-----------------------------------~~~I~~~~~dG~-------------~~~~~~~~---- 161 (316)
T 1ijq_A 134 MYWTDWGT-----------------------------------PAKIKKGGLNGV-------------DIYSLVTE---- 161 (316)
T ss_dssp EEEEECSS-----------------------------------SCEEEEEETTSC-------------CEEEEECS----
T ss_pred EEEEccCC-----------------------------------CCeEEEEcCCCC-------------CeEEEEEC----
Confidence 88753210 026777765432 22333321
Q ss_pred CCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCC
Q 005466 369 NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSG 448 (695)
Q Consensus 369 ~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~ 448 (695)
..+.--.|.++|.++.||++-. ..++|.|+|.||.
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~-----------------~~~~I~~~d~dg~---------------------------- 196 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDS-----------------KLHSISSIDVNGG---------------------------- 196 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC----------------------------
T ss_pred CCCCceEEEEeccCCEEEEEEC-----------------CCCeEEEEecCCC----------------------------
Confidence 2344557999985689999732 1468999999872
Q ss_pred CCCeEEEe---ccccceeeeecCCCCCeEEEEEccCCC
Q 005466 449 LQPEIWAL---GLRNPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 449 ~~pEI~A~---GlRNP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
..++++. ++.+|.++++|. + +||++|-+.+.
T Consensus 197 -~~~~~~~~~~~~~~P~giav~~--~-~ly~~d~~~~~ 230 (316)
T 1ijq_A 197 -NRKTILEDEKRLAHPFSLAVFE--D-KVFWTDIINEA 230 (316)
T ss_dssp -SCEEEEECTTTTSSEEEEEEET--T-EEEEEETTTTE
T ss_pred -ceEEEeecCCccCCcEEEEEEC--C-EEEEEECCCCe
Confidence 1234433 478999999984 3 69999977643
No 49
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.15 E-value=0.021 Score=56.48 Aligned_cols=141 Identities=13% Similarity=0.139 Sum_probs=84.4
Q ss_pred eeEEE-cCCCCceEEEEee--CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVA-HPDGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~-~pDGs~RlfV~Eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..+++ .++| ++||++. .+.|++++ + ++ +.+. .+.........+|+++| +|++||.
T Consensus 80 ~~i~~~~~~g--~l~v~~~~~~~~i~~~d-~-~g--~~~~------------~~~~~~~~~~~~i~~~~----~g~l~v~ 137 (286)
T 1q7f_A 80 NRVAVVRNSG--DIIVTERSPTHQIQIYN-Q-YG--QFVR------------KFGATILQHPRGVTVDN----KGRIIVV 137 (286)
T ss_dssp EEEEEETTTT--EEEEEECGGGCEEEEEC-T-TS--CEEE------------EECTTTCSCEEEEEECT----TSCEEEE
T ss_pred eEEEEEcCCC--eEEEEcCCCCCEEEEEC-C-CC--cEEE------------EecCccCCCceEEEEeC----CCCEEEE
Confidence 67788 5777 8999995 78898875 2 22 2221 01111224578999998 5788886
Q ss_pred EeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCcc
Q 005466 293 FNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHH 372 (695)
Q Consensus 293 Ys~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H~ 372 (695)
-... .+|.+|..++ +....+ ..+.....
T Consensus 138 ~~~~------------------------------------~~i~~~~~~g--------------~~~~~~--~~~~~~~~ 165 (286)
T 1q7f_A 138 ECKV------------------------------------MRVIIFDQNG--------------NVLHKF--GCSKHLEF 165 (286)
T ss_dssp ETTT------------------------------------TEEEEECTTS--------------CEEEEE--ECTTTCSS
T ss_pred ECCC------------------------------------CEEEEEcCCC--------------CEEEEe--CCCCccCC
Confidence 3210 2565664221 111122 22212223
Q ss_pred ccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCe
Q 005466 373 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPE 452 (695)
Q Consensus 373 GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pE 452 (695)
-..|.|.+ ||.|||+... .++|.++|.++. .
T Consensus 166 p~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~-------------------------------~ 196 (286)
T 1q7f_A 166 PNGVVVND-KQEIFISDNR-----------------AHCVKVFNYEGQ-------------------------------Y 196 (286)
T ss_dssp EEEEEECS-SSEEEEEEGG-----------------GTEEEEEETTCC-------------------------------E
T ss_pred cEEEEECC-CCCEEEEECC-----------------CCEEEEEcCCCC-------------------------------E
Confidence 45799999 9999997532 356888887762 0
Q ss_pred EEEe---c-cccceeeeecCCCCCeEEEEEccC
Q 005466 453 IWAL---G-LRNPWRCSFDSDRPSYFMCADVGQ 481 (695)
Q Consensus 453 I~A~---G-lRNP~r~sfD~~~g~~l~~~DvG~ 481 (695)
+..+ | +..|.++++|+. | +||+++.+.
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~-G-~l~v~~~~~ 227 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSN-G-EILIADNHN 227 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTT-C-CEEEEECSS
T ss_pred EEEEccCCccCCCcEEEECCC-C-CEEEEeCCC
Confidence 1111 2 467899999996 4 599998765
No 50
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.05 E-value=0.0011 Score=76.98 Aligned_cols=71 Identities=14% Similarity=0.214 Sum_probs=49.8
Q ss_pred cccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCC
Q 005466 372 HGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 451 (695)
Q Consensus 372 ~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~p 451 (695)
.-..|++.|.+|+|||+-- + ..++|.|++.||.. +.
T Consensus 497 ~P~giavDp~~g~ly~td~--~--------------~~~~I~~~~~dG~~----------------------------~~ 532 (699)
T 1n7d_A 497 KPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGVD----------------------------IY 532 (699)
T ss_dssp CCCCEECCSSSSCCEECCC--S--------------SSCCEEBCCSSSCC----------------------------CC
T ss_pred CcceEEEccCCCcEEEccc--C--------------CCCeEEEEeCCCCC----------------------------ee
Confidence 3456899986689998641 1 13789999998820 11
Q ss_pred eEEEeccccceeeeecCCCCCeEEEEEccCCCceeE
Q 005466 452 EIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 487 (695)
Q Consensus 452 EI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEI 487 (695)
.+...++..|.+++||+..+ +||++|.+.+..+.+
T Consensus 533 ~l~~~~l~~PnGlavd~~~~-~LY~aD~~~~~I~~~ 567 (699)
T 1n7d_A 533 SLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSI 567 (699)
T ss_dssp EESCSSCSSCCCEEECTTTC-CEEEEETTTTEEEEE
T ss_pred EEEeCCCCCccEEEEeccCC-EEEEEecCCCeEEEE
Confidence 23345788999999999876 699999876544433
No 51
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.98 E-value=0.018 Score=58.86 Aligned_cols=163 Identities=8% Similarity=0.042 Sum_probs=92.4
Q ss_pred eeEEEcC-CCCceEEEEeeC------------------ceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceee
Q 005466 216 LNMVAHP-DGSNRAFFSNQE------------------GKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 276 (695)
Q Consensus 216 ~~m~~~p-DGs~RlfV~Eq~------------------G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLG 276 (695)
-.|+..+ || ++||++.. |.|+.++ ++.+. ++ +........-|
T Consensus 129 ~~i~~d~~~G--~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d-~~~~~---~~-------------~~~~~~~~p~g 189 (322)
T 2fp8_A 129 YAVTVDQRTG--IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD-PSTKE---TT-------------LLLKELHVPGG 189 (322)
T ss_dssp EEEEECTTTC--CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE-TTTTE---EE-------------EEEEEESCCCE
T ss_pred ceEEEecCCC--EEEEECCcccccccccceehcccCCCceEEEEe-CCCCE---EE-------------EeccCCccCcc
Confidence 5688899 88 79999853 7788775 33221 11 11112244578
Q ss_pred eeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 005466 277 MAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 356 (695)
Q Consensus 277 iAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~ 356 (695)
||++|+ ..++||.-+.. .+|.+|..++.. ..
T Consensus 190 ia~~~d---g~~lyv~d~~~------------------------------------~~I~~~~~~~~~----------~~ 220 (322)
T 2fp8_A 190 AEVSAD---SSFVLVAEFLS------------------------------------HQIVKYWLEGPK----------KG 220 (322)
T ss_dssp EEECTT---SSEEEEEEGGG------------------------------------TEEEEEESSSTT----------TT
T ss_pred eEECCC---CCEEEEEeCCC------------------------------------CeEEEEECCCCc----------CC
Confidence 999983 34688865421 378888764320 12
Q ss_pred CeEEEEEecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcC
Q 005466 357 EVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYS 436 (695)
Q Consensus 357 e~~~Il~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~Ys 436 (695)
+.+.+.+ ++. .-.|.+++ ||.|||+.......- | .....++|+|+|++|... ..|.
T Consensus 221 ~~~~~~~--~~g----P~gi~~d~-~G~l~va~~~~~~~~-~------~~~~~~~v~~~d~~G~~~----------~~~~ 276 (322)
T 2fp8_A 221 TAEVLVK--IPN----PGNIKRNA-DGHFWVSSSEELDGN-M------HGRVDPKGIKFDEFGNIL----------EVIP 276 (322)
T ss_dssp CEEEEEE--CSS----EEEEEECT-TSCEEEEEEEETTSS-T------TSCEEEEEEEECTTSCEE----------EEEE
T ss_pred ccceEEe--CCC----CCCeEECC-CCCEEEEecCccccc-c------cCCCccEEEEECCCCCEE----------EEEE
Confidence 2233222 332 34599999 999999986522110 1 112357899999987310 1122
Q ss_pred CCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEE
Q 005466 437 IPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 488 (695)
Q Consensus 437 IP~DNPF~~~~~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn 488 (695)
.|...+ ++.|..++++ .+ +||+++...+..-.++
T Consensus 277 ~~~g~~---------------~~~~~~~~~~--~g-~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 277 LPPPFA---------------GEHFEQIQEH--DG-LLYIGTLFHGSVGILV 310 (322)
T ss_dssp CCTTTT---------------TSCCCEEEEE--TT-EEEEECSSCSEEEEEE
T ss_pred CCCCCc---------------cccceEEEEe--CC-EEEEeecCCCceEEEe
Confidence 221111 5667777764 23 6999987765433333
No 52
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.88 E-value=0.014 Score=59.60 Aligned_cols=79 Identities=13% Similarity=0.142 Sum_probs=50.3
Q ss_pred cceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeE
Q 005466 374 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 453 (695)
Q Consensus 374 G~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI 453 (695)
..|.+++.||.|||+..........+...-......|.|+|+|+++. ..++
T Consensus 129 ~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-----------------------------~~~~ 179 (322)
T 2fp8_A 129 YAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK-----------------------------ETTL 179 (322)
T ss_dssp EEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT-----------------------------EEEE
T ss_pred ceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC-----------------------------EEEE
Confidence 45888875799999864321000000000001234599999998751 1256
Q ss_pred EEeccccceeeeecCCCCCeEEEEEccCC
Q 005466 454 WALGLRNPWRCSFDSDRPSYFMCADVGQD 482 (695)
Q Consensus 454 ~A~GlRNP~r~sfD~~~g~~l~~~DvG~d 482 (695)
++-++..|.+++|++.. ..||++|.+.+
T Consensus 180 ~~~~~~~p~gia~~~dg-~~lyv~d~~~~ 207 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADS-SFVLVAEFLSH 207 (322)
T ss_dssp EEEEESCCCEEEECTTS-SEEEEEEGGGT
T ss_pred eccCCccCcceEECCCC-CEEEEEeCCCC
Confidence 67789999999999974 36999998764
No 53
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.83 E-value=0.079 Score=54.28 Aligned_cols=167 Identities=11% Similarity=0.123 Sum_probs=92.8
Q ss_pred eeEEEcC-CCCceEEEEee--CceEEEEEccCCCCCceeeecCCCCCcCCcCc-e-eeCCCCceeeeeeCCCCCCCCEEE
Q 005466 216 LNMVAHP-DGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDE-V-HFDTEFGLMGMAFHPNFAKNGRFF 290 (695)
Q Consensus 216 ~~m~~~p-DGs~RlfV~Eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~-V-~~~~E~GLLGiAfhPdF~~Ng~~Y 290 (695)
..|++.| +| ++||++. .++|++++ + +| +.+.. +-..... . .........|||++|+ +|.+|
T Consensus 146 ~~ia~~~~~g--~lyv~d~~~~~~I~~~~-~-~g--~~~~~-----~~~~g~~~~~~~~~~~~p~gia~d~~---~g~l~ 211 (329)
T 3fvz_A 146 TDVAVEPSTG--AVFVSDGYCNSRIVQFS-P-SG--KFVTQ-----WGEESSGSSPRPGQFSVPHSLALVPH---LDQLC 211 (329)
T ss_dssp EEEEECTTTC--CEEEEECSSCCEEEEEC-T-TS--CEEEE-----ECEECCSSSCCTTEESCEEEEEEETT---TTEEE
T ss_pred cEEEEeCCCC--eEEEEeCCCCCeEEEEc-C-CC--CEEEE-----eccCCCCCCCCCcccCCCcEEEEECC---CCEEE
Confidence 7899999 67 7999993 78999885 3 23 22210 0000000 0 0000123689999973 58999
Q ss_pred EEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCC
Q 005466 291 ASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNG 370 (695)
Q Consensus 291 vsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~ 370 (695)
|.-.. ..+|.+|..+.. +.... +..+...
T Consensus 212 v~d~~------------------------------------~~~I~~~~~~~G-------------~~~~~--~~~~~~~ 240 (329)
T 3fvz_A 212 VADRE------------------------------------NGRIQCFKTDTK-------------EFVRE--IKHASFG 240 (329)
T ss_dssp EEETT------------------------------------TTEEEEEETTTC-------------CEEEE--ECCTTTT
T ss_pred EEECC------------------------------------CCEEEEEECCCC-------------cEEEE--EeccccC
Confidence 86431 127777875311 11112 2222111
Q ss_pred ccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCC
Q 005466 371 HHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQ 450 (695)
Q Consensus 371 H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~ 450 (695)
..--.+.|.| |.+|+.-|.-.-+ | ....+|..++..... .
T Consensus 241 ~~~~~~~~~p--g~~~~~~g~~~v~-~---------~~~~~v~~~~~~~g~----------------------------~ 280 (329)
T 3fvz_A 241 RNVFAISYIP--GFLFAVNGKPYFG-D---------QEPVQGFVMNFSSGE----------------------------I 280 (329)
T ss_dssp TCEEEEEEET--TEEEEEECCCCTT-C---------SCCCCEEEEETTTCC----------------------------E
T ss_pred CCcceeeecC--CEEEEeCCCEEec-c---------CCCcEEEEEEcCCCe----------------------------E
Confidence 1222588888 8999987763211 1 124567777754310 0
Q ss_pred CeEE---EeccccceeeeecCCCCCeEEEEEccCCCceeEEE
Q 005466 451 PEIW---ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDI 489 (695)
Q Consensus 451 pEI~---A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~ 489 (695)
-..+ .-.+..|+++++|+. | .||++|.+.+..-.+++
T Consensus 281 ~~~~~~~~~~~~~p~~ia~~~d-G-~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 281 IDVFKPVRKHFDMPHDIVASED-G-TVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEECCSSSCCSSEEEEEECTT-S-EEEEEESSSCCEEEEEE
T ss_pred EEEEcCCCCccCCeeEEEECCC-C-CEEEEECCCCEEEEEeC
Confidence 0111 134678999999997 4 69999998876544443
No 54
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.82 E-value=0.029 Score=57.17 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=43.0
Q ss_pred ccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCe
Q 005466 373 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPE 452 (695)
Q Consensus 373 GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pE 452 (695)
.-.|.+++ ||.|||+.-. .++|.||+++|.. .+
T Consensus 214 P~gi~vd~-dG~l~va~~~-----------------~~~V~~~~~~G~~-----------------------------~~ 246 (306)
T 2p4o_A 214 IDDFAFDV-EGNLYGATHI-----------------YNSVVRIAPDRST-----------------------------TI 246 (306)
T ss_dssp CSSEEEBT-TCCEEEECBT-----------------TCCEEEECTTCCE-----------------------------EE
T ss_pred CCCeEECC-CCCEEEEeCC-----------------CCeEEEECCCCCE-----------------------------EE
Confidence 34699999 9999998643 3569999887721 01
Q ss_pred E--EEeccccceeeeec---CCCCCeEEEEEcc
Q 005466 453 I--WALGLRNPWRCSFD---SDRPSYFMCADVG 480 (695)
Q Consensus 453 I--~A~GlRNP~r~sfD---~~~g~~l~~~DvG 480 (695)
+ +..+++.|..++|+ +.. ++||+++.+
T Consensus 247 ~~~~~~~~~~p~~~a~~g~~~d~-~~LyVt~~~ 278 (306)
T 2p4o_A 247 IAQAEQGVIGSTAVAFGQTEGDC-TAIYVVTNG 278 (306)
T ss_dssp EECGGGTCTTEEEEEECCSTTTT-TEEEEEECT
T ss_pred EeecccccCCceEEEEecccCCC-CEEEEECCC
Confidence 1 23467889999998 443 479999986
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.80 E-value=0.11 Score=52.18 Aligned_cols=62 Identities=13% Similarity=0.253 Sum_probs=39.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..++++|||. ++|++..+|.|++++. +. ++.+.. +.+. ....+....+++|+|+ .+++|+.-
T Consensus 188 ~~~~~s~dg~-~l~~~~~~~~i~~~d~-~~--~~~~~~------~~~~---~~~~~~~~~~~~~s~d---g~~l~~~~ 249 (353)
T 3vgz_A 188 TGLALDSEGK-RLYTTNADGELITIDT-AD--NKILSR------KKLL---DDGKEHFFINISLDTA---RQRAFITD 249 (353)
T ss_dssp CCCEEETTTT-EEEEECTTSEEEEEET-TT--TEEEEE------EECC---CSSSCCCEEEEEEETT---TTEEEEEE
T ss_pred ceEEECCCCC-EEEEEcCCCeEEEEEC-CC--CeEEEE------EEcC---CCCCCcccceEEECCC---CCEEEEEe
Confidence 6789999996 7999999999999874 22 222210 0000 0012344678999984 55677754
No 56
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.74 E-value=0.049 Score=54.06 Aligned_cols=61 Identities=10% Similarity=0.094 Sum_probs=43.7
Q ss_pred cceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecC-CCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCe
Q 005466 374 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVD-NIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPE 452 (695)
Q Consensus 374 G~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvD-g~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pE 452 (695)
..|.+++ ||.|||+... .+.|.|+|++ +. .-+
T Consensus 229 ~~i~~d~-~G~l~v~~~~-----------------~~~i~~~d~~~g~-----------------------------~~~ 261 (314)
T 1pjx_A 229 DGMDFDE-DNNLLVANWG-----------------SSHIEVFGPDGGQ-----------------------------PKM 261 (314)
T ss_dssp EEEEEBT-TCCEEEEEET-----------------TTEEEEECTTCBS-----------------------------CSE
T ss_pred CceEECC-CCCEEEEEcC-----------------CCEEEEEcCCCCc-----------------------------EeE
Confidence 4599999 9999998743 2578999887 31 113
Q ss_pred EEEeccccceeeeecCCCCCeEEEEEccCC
Q 005466 453 IWALGLRNPWRCSFDSDRPSYFMCADVGQD 482 (695)
Q Consensus 453 I~A~GlRNP~r~sfD~~~g~~l~~~DvG~d 482 (695)
.+..+...|..++|++.. .+||+++.+.+
T Consensus 262 ~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~ 290 (314)
T 1pjx_A 262 RIRCPFEKPSNLHFKPQT-KTIFVTEHENN 290 (314)
T ss_dssp EEECSSSCEEEEEECTTS-SEEEEEETTTT
T ss_pred EEeCCCCCceeEEECCCC-CEEEEEeCCCC
Confidence 344455788999998874 35999987654
No 57
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.70 E-value=0.098 Score=53.04 Aligned_cols=60 Identities=18% Similarity=0.351 Sum_probs=36.6
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..++++||| ++|++.. .+.|+++++..+| +...+ ..+......+..+++|+|| ..++|+.
T Consensus 144 ~~~~~spdg--~l~v~~~~~~~v~~~~~~~~g--~~~~~----------~~~~~~~g~~p~~~~~spd---g~~l~v~ 204 (347)
T 3hfq_A 144 HYTDLTPDN--RLAVIDLGSDKVYVYNVSDAG--QLSEQ----------SVLTMEAGFGPRHLVFSPD---GQYAFLA 204 (347)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEEECTTS--CEEEE----------EEEECCTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCC--cEEEEeCCCCEEEEEEECCCC--cEEEe----------eeEEcCCCCCCceEEECCC---CCEEEEE
Confidence 458999999 5999886 6789988763222 21100 1112223346778999984 2347764
No 58
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.69 E-value=0.11 Score=52.11 Aligned_cols=57 Identities=18% Similarity=0.307 Sum_probs=35.7
Q ss_pred eeEEEcCCCCceEEEEee--CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..++++|||. ++|++.. .+.|++++. +. ++.+. .+. .......+++|+|+ ..++|+.
T Consensus 144 ~~~~~s~dg~-~l~~~~~~~~~~i~~~d~-~~--~~~~~------------~~~-~~~~~~~~~~~s~d---g~~l~~~ 202 (353)
T 3vgz_A 144 RELVADDATN-TVYISGIGKESVIWVVDG-GN--IKLKT------------AIQ-NTGKMSTGLALDSE---GKRLYTT 202 (353)
T ss_dssp EEEEEETTTT-EEEEEEESSSCEEEEEET-TT--TEEEE------------EEC-CCCTTCCCCEEETT---TTEEEEE
T ss_pred ceEEECCCCC-EEEEEecCCCceEEEEcC-CC--CceEE------------Eec-CCCCccceEEECCC---CCEEEEE
Confidence 5689999996 7999884 788999874 22 22211 010 11233678899984 4567764
No 59
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.57 E-value=0.12 Score=51.51 Aligned_cols=56 Identities=9% Similarity=-0.015 Sum_probs=36.9
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.|.|++ ||.|||++ + +.|.|+|+++. .-+.+
T Consensus 222 ~i~~d~-~G~l~v~~-~------------------~~v~~~~~~g~-----------------------------~~~~~ 252 (296)
T 3e5z_A 222 GLRVDA-GGLIWASA-G------------------DGVHVLTPDGD-----------------------------ELGRV 252 (296)
T ss_dssp SEEEBT-TSCEEEEE-T------------------TEEEEECTTSC-----------------------------EEEEE
T ss_pred eEEECC-CCCEEEEc-C------------------CeEEEECCCCC-----------------------------EEEEE
Confidence 599999 99999988 2 34788887762 11234
Q ss_pred EeccccceeeeecCCCCCeEEEEEcc
Q 005466 455 ALGLRNPWRCSFDSDRPSYFMCADVG 480 (695)
Q Consensus 455 A~GlRNP~r~sfD~~~g~~l~~~DvG 480 (695)
...-+ |..++|+..++.+||++..+
T Consensus 253 ~~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp ECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred ECCCC-ceeEEEECCCCCEEEEEcCC
Confidence 44444 77788853334478988653
No 60
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.54 E-value=0.15 Score=52.43 Aligned_cols=61 Identities=13% Similarity=0.155 Sum_probs=43.1
Q ss_pred cceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeE
Q 005466 374 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 453 (695)
Q Consensus 374 G~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI 453 (695)
-.|.+++ ||.|||++-. .|+|.|+|+++. .-+.
T Consensus 233 ~gi~~d~-~G~lwva~~~-----------------~~~v~~~d~~g~-----------------------------~~~~ 265 (326)
T 2ghs_A 233 DGSVCDA-EGHIWNARWG-----------------EGAVDRYDTDGN-----------------------------HIAR 265 (326)
T ss_dssp EEEEECT-TSCEEEEEET-----------------TTEEEEECTTCC-----------------------------EEEE
T ss_pred CeeEECC-CCCEEEEEeC-----------------CCEEEEECCCCC-----------------------------EEEE
Confidence 3589999 9999998732 256899988662 1133
Q ss_pred EEeccccceeeeec-CCCCCeEEEEEccCC
Q 005466 454 WALGLRNPWRCSFD-SDRPSYFMCADVGQD 482 (695)
Q Consensus 454 ~A~GlRNP~r~sfD-~~~g~~l~~~DvG~d 482 (695)
+..+.++|..++|+ +.. ++||++.....
T Consensus 266 i~~~~~~~~~~af~g~d~-~~L~vt~~~~~ 294 (326)
T 2ghs_A 266 YEVPGKQTTCPAFIGPDA-SRLLVTSAREH 294 (326)
T ss_dssp EECSCSBEEEEEEESTTS-CEEEEEEBCTT
T ss_pred EECCCCCcEEEEEecCCC-CEEEEEecCCC
Confidence 45556778899998 553 47999887654
No 61
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.50 E-value=0.13 Score=52.92 Aligned_cols=60 Identities=17% Similarity=0.289 Sum_probs=40.2
Q ss_pred cccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCC
Q 005466 372 HGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 451 (695)
Q Consensus 372 ~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~p 451 (695)
+...|.|.|.+++||++.+ +|.+||.++. .+. .-+|.
T Consensus 226 ~p~~la~~~d~~~lyv~~~--------------------~v~~~d~~t~---------------~~~-~~~~~------- 262 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN--------------------DIWRMPVEAD---------------RVP-VRPFL------- 262 (328)
T ss_dssp CCEEEEECTTSCEEEEESS--------------------SEEEEETTCS---------------SCC-SSCSB-------
T ss_pred CceeEEEecCCCEEEEEcc--------------------EEEEEECCCC---------------cee-eeeee-------
Confidence 4557999993467888521 6899998752 110 11121
Q ss_pred eEEEeccccceeeeecCCCCCeEEEEE
Q 005466 452 EIWALGLRNPWRCSFDSDRPSYFMCAD 478 (695)
Q Consensus 452 EI~A~GlRNP~r~sfD~~~g~~l~~~D 478 (695)
..+.+.|+++++||.++ +||+++
T Consensus 263 ---~~~~~~p~gi~vdp~~g-~lyva~ 285 (328)
T 3dsm_A 263 ---EFRDTKYYGLTVNPNNG-EVYVAD 285 (328)
T ss_dssp ---CCCSSCEEEEEECTTTC-CEEEEE
T ss_pred ---cCCCCceEEEEEcCCCC-eEEEEc
Confidence 12368899999999776 699998
No 62
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.41 E-value=0.27 Score=50.52 Aligned_cols=164 Identities=11% Similarity=0.097 Sum_probs=93.2
Q ss_pred CcEEEEEecCce-eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCC----CCceeee
Q 005466 204 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDT----EFGLMGM 277 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~----E~GLLGi 277 (695)
+-.+.+|..+-. ..|++.+|| ++||+. ..+.|++++. +. ++... .+..+. .....+|
T Consensus 74 ~~~~~~i~~~~~p~~i~~~~~g--~lyv~~~~~~~v~~iD~-~t--~~~~~------------~i~~g~~~~~~~~p~~i 136 (328)
T 3dsm_A 74 FKEVGRITGFTSPRYIHFLSDE--KAYVTQIWDYRIFIINP-KT--YEITG------------YIECPDMDMESGSTEQM 136 (328)
T ss_dssp CCEEEEEECCSSEEEEEEEETT--EEEEEEBSCSEEEEEET-TT--TEEEE------------EEECTTCCTTTCBCCCE
T ss_pred cEEEEEcCCCCCCcEEEEeCCC--eEEEEECCCCeEEEEEC-CC--CeEEE------------EEEcCCccccCCCcceE
Confidence 434566654433 888888998 899999 6899999873 32 22211 111111 1256788
Q ss_pred eeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCC
Q 005466 278 AFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSE 357 (695)
Q Consensus 278 AfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e 357 (695)
++ .++++||.-... ...|..+.... .+
T Consensus 137 ~~-----~~~~lyv~~~~~-----------------------------------~~~v~viD~~t-------------~~ 163 (328)
T 3dsm_A 137 VQ-----YGKYVYVNCWSY-----------------------------------QNRILKIDTET-------------DK 163 (328)
T ss_dssp EE-----ETTEEEEEECTT-----------------------------------CCEEEEEETTT-------------TE
T ss_pred EE-----ECCEEEEEcCCC-----------------------------------CCEEEEEECCC-------------Ce
Confidence 88 378999973100 12566665321 11
Q ss_pred eEEEEEecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCC
Q 005466 358 VRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSI 437 (695)
Q Consensus 358 ~~~Il~~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsI 437 (695)
+...+. .. .....|.|.| ||.||++.-... ...|+ .+ ..++|.+||+++. .
T Consensus 164 ~~~~i~--~g---~~p~~i~~~~-dG~l~v~~~~~~-~~~~~--~~----~~~~v~~id~~t~---------------~- 214 (328)
T 3dsm_A 164 VVDELT--IG---IQPTSLVMDK-YNKMWTITDGGY-EGSPY--GY----EAPSLYRIDAETF---------------T- 214 (328)
T ss_dssp EEEEEE--CS---SCBCCCEECT-TSEEEEEBCCBC-TTCSS--CB----CCCEEEEEETTTT---------------E-
T ss_pred EEEEEE--cC---CCccceEEcC-CCCEEEEECCCc-cCCcc--cc----CCceEEEEECCCC---------------e-
Confidence 111122 11 1234699999 999999874321 11222 11 2589999998751 0
Q ss_pred CCCCCCCCCCCCCCeEEEec-cccceeeeecCCCCCeEEEEEc
Q 005466 438 PKDNPFSEDSGLQPEIWALG-LRNPWRCSFDSDRPSYFMCADV 479 (695)
Q Consensus 438 P~DNPF~~~~~~~pEI~A~G-lRNP~r~sfD~~~g~~l~~~Dv 479 (695)
.-+.+..+ -..|.+++|+|... +||+++.
T Consensus 215 ------------v~~~~~~~~g~~p~~la~~~d~~-~lyv~~~ 244 (328)
T 3dsm_A 215 ------------VEKQFKFKLGDWPSEVQLNGTRD-TLYWINN 244 (328)
T ss_dssp ------------EEEEEECCTTCCCEEEEECTTSC-EEEEESS
T ss_pred ------------EEEEEecCCCCCceeEEEecCCC-EEEEEcc
Confidence 00122221 14799999999754 7999864
No 63
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.40 E-value=0.31 Score=48.23 Aligned_cols=63 Identities=22% Similarity=0.329 Sum_probs=38.4
Q ss_pred eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..+++.|||. ++|++. .+|.|+++++..++. ...+ . ..........+..+++|+|+ ..++|+.
T Consensus 132 ~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~--~~~~------~--~~~~~~~~~~~~~~~~~~pd---g~~l~~~ 195 (343)
T 1ri6_A 132 HSANISPDNR-TLWVPALKQDRICLFTVSDDGH--LVAQ------D--PAEVTTVEGAGPRHMVFHPN---EQYAYCV 195 (343)
T ss_dssp CCCEECTTSS-EEEEEEGGGTEEEEEEECTTSC--EEEE------E--EEEEECSTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCCC-EEEEecCCCCEEEEEEecCCCc--eeee------c--ccccccCCCCCcceEEECCC---CCEEEEE
Confidence 6789999995 689988 789999987632222 1100 0 00111122346778999985 3457665
No 64
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.32 E-value=0.11 Score=58.36 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=24.0
Q ss_pred ccccceeeeecCCCCCeEEEEEccCCCceeE
Q 005466 457 GLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 487 (695)
Q Consensus 457 GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEI 487 (695)
-|..|+++++|+.++ .||++|.+-+..-.|
T Consensus 442 ~f~~P~gIavd~~~g-~lyVaD~~N~rIrki 471 (496)
T 3kya_A 442 RFRDVSGLVYDDVKE-MFYVHDQVGHTIRTI 471 (496)
T ss_dssp CCSSEEEEEEETTTT-EEEEEETTTTEEEEE
T ss_pred hcCCCcEEEEECCCC-EEEEEeCCCCEEEEE
Confidence 378999999999766 699999988654333
No 65
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.20 E-value=0.2 Score=50.42 Aligned_cols=24 Identities=21% Similarity=0.458 Sum_probs=19.4
Q ss_pred eeEEEcCCCCceEEEEee-------CceEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ-------EGKIWLAT 241 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-------~G~V~~~~ 241 (695)
..+++.||| ++||+.. .+.||.++
T Consensus 138 ~~i~~d~~g--~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 138 DDMVFDSKG--GFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp EEEEECTTS--CEEEEECCCBTTBCCEEEEEEC
T ss_pred cceEECCCC--CEEEEeccccccCCCceEEEEe
Confidence 678899999 7999876 37888875
No 66
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.14 E-value=0.25 Score=50.72 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=46.5
Q ss_pred cceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeE
Q 005466 374 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 453 (695)
Q Consensus 374 G~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI 453 (695)
..+.++| ||.||+++-+.. .....|+|+|++ ++. .+.
T Consensus 137 ~~i~~d~-~G~l~v~~~~~~-----------~~~~~~~l~~~~-~g~------------------------------~~~ 173 (326)
T 2ghs_A 137 NDGRMHP-SGALWIGTMGRK-----------AETGAGSIYHVA-KGK------------------------------VTK 173 (326)
T ss_dssp EEEEECT-TSCEEEEEEETT-----------CCTTCEEEEEEE-TTE------------------------------EEE
T ss_pred CCEEECC-CCCEEEEeCCCc-----------CCCCceEEEEEe-CCc------------------------------EEE
Confidence 3689999 999999763211 123468999999 651 122
Q ss_pred EEeccccceeeeecCCCCCeEEEEEccCCCceeEEEe
Q 005466 454 WALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDII 490 (695)
Q Consensus 454 ~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I 490 (695)
+..++..|.+++|++.. ..||++|...+ .|.++
T Consensus 174 ~~~~~~~~~~i~~s~dg-~~lyv~~~~~~---~I~~~ 206 (326)
T 2ghs_A 174 LFADISIPNSICFSPDG-TTGYFVDTKVN---RLMRV 206 (326)
T ss_dssp EEEEESSEEEEEECTTS-CEEEEEETTTC---EEEEE
T ss_pred eeCCCcccCCeEEcCCC-CEEEEEECCCC---EEEEE
Confidence 34456678899999875 46899886543 45444
No 67
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.11 E-value=0.11 Score=52.51 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=19.8
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCC
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 419 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg 419 (695)
.|.+++ ||.||++++ +.|.+++++|
T Consensus 243 gi~~d~-~G~lwv~~~-------------------~gv~~~~~~g 267 (305)
T 3dr2_A 243 GFCVDR-GGWLWSSSG-------------------TGVCVFDSDG 267 (305)
T ss_dssp SEEECT-TSCEEECCS-------------------SEEEEECTTS
T ss_pred eEEECC-CCCEEEecC-------------------CcEEEECCCC
Confidence 589999 999999752 1388888877
No 68
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.08 E-value=0.48 Score=47.88 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=23.2
Q ss_pred eeEEEcCCCCceEEEEe-eCceEEEEEccCCC
Q 005466 216 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQG 246 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~g 246 (695)
..++++|||. ++|++. ..|.|.++++..+|
T Consensus 89 ~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 89 AYVAVDEARQ-LVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp SEEEEETTTT-EEEEEETTTTEEEEEEECTTS
T ss_pred EEEEECCCCC-EEEEEeCCCCEEEEEEeCCCC
Confidence 7799999995 688888 57889888764333
No 69
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.01 E-value=0.68 Score=47.13 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=37.5
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCC----ceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLG----ETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFF 290 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg----~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Y 290 (695)
..++++|||. ++|++.. .+.|+++.+... .+ +.+.. .............+..+++|+|+ ..++|
T Consensus 158 ~~~~~spdg~-~l~~~~~~~~~v~v~~~~~~-~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~spd---g~~l~ 226 (361)
T 3scy_A 158 HCVRITPDGK-YLLADDLGTDQIHKFNINPN-ANADNKEKFLT------KGTPEAFKVAPGSGPRHLIFNSD---GKFAY 226 (361)
T ss_dssp EEEEECTTSS-EEEEEETTTTEEEEEEECTT-CCTTTCCCCEE------EEEEEEEECCTTCCEEEEEECTT---SSEEE
T ss_pred eEEEECCCCC-EEEEEeCCCCEEEEEEEcCC-CCcccccceee------cccccceecCCCCCCeEEEEcCC---CCEEE
Confidence 4589999995 5888886 688988865321 11 10100 00000112234566789999984 23577
Q ss_pred EE
Q 005466 291 AS 292 (695)
Q Consensus 291 vs 292 (695)
+.
T Consensus 227 v~ 228 (361)
T 3scy_A 227 LI 228 (361)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 70
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.01 E-value=0.55 Score=46.75 Aligned_cols=74 Identities=14% Similarity=0.220 Sum_probs=44.7
Q ss_pred CcEEEEEecCce-eeEEEcCCCCceEEEEeeC-ce-EEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeC
Q 005466 204 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQE-GK-IWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 280 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~-G~-V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfh 280 (695)
+-.+..+..+-. ..++++|||. ++|+++.. +. |+++++..++ ... +....+ .....+..+++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~i~~~~~~~~g--~~~---------~~~~~~-~~~~~~~~~~~~s 184 (331)
T 3u4y_A 118 NKFISTIPIPYDAVGIAISPNGN-GLILIDRSSANTVRRFKIDADG--VLF---------DTGQEF-ISGGTRPFNITFT 184 (331)
T ss_dssp TEEEEEEECCTTEEEEEECTTSS-CEEEEEETTTTEEEEEEECTTC--CEE---------EEEEEE-ECSSSSEEEEEEC
T ss_pred CCeEEEEECCCCccceEECCCCC-EEEEEecCCCceEEEEEECCCC--cEe---------ecCCcc-ccCCCCccceEEC
Confidence 444555554444 7899999995 59999875 77 8887764322 111 111111 1334567899999
Q ss_pred CCCCCCCEEEEEE
Q 005466 281 PNFAKNGRFFASF 293 (695)
Q Consensus 281 PdF~~Ng~~YvsY 293 (695)
|+ ..++|+.-
T Consensus 185 pd---g~~l~v~~ 194 (331)
T 3u4y_A 185 PD---GNFAFVAN 194 (331)
T ss_dssp TT---SSEEEEEE
T ss_pred CC---CCEEEEEe
Confidence 84 33577754
No 71
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.94 E-value=0.025 Score=65.55 Aligned_cols=63 Identities=16% Similarity=0.261 Sum_probs=43.6
Q ss_pred cccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCC
Q 005466 372 HGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 451 (695)
Q Consensus 372 ~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~p 451 (695)
.-..|+|+|..+.|||+-.. .++|.+++.||. ..
T Consensus 541 ~PnGlavd~~~~~LY~aD~~-----------------~~~I~~~d~dG~-----------------------------~~ 574 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGG-----------------------------NR 574 (699)
T ss_dssp SCCCEEECTTTCCEEEEETT-----------------TTEEEEECSSSS-----------------------------CC
T ss_pred CccEEEEeccCCEEEEEecC-----------------CCeEEEEccCCC-----------------------------ce
Confidence 34569999845899997522 367999999872 01
Q ss_pred eEEE---eccccceeeeecCCCCCeEEEEEccCCC
Q 005466 452 EIWA---LGLRNPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 452 EI~A---~GlRNP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
+++. -.+.+|.++++|.. +||++|.+.+.
T Consensus 575 ~~~~~~~~~~~~P~glavd~~---~lywtd~~~~~ 606 (699)
T 1n7d_A 575 KTILEDEKRLAHPFSLAVFED---KVFWTDIINEA 606 (699)
T ss_dssp EEECCCSSSCSSCCCCEEETT---EEEEECSTTTC
T ss_pred EEEEecCCcCCCceEeEEECC---EEEEEeCCCCe
Confidence 2222 24689999999874 59999966543
No 72
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.84 E-value=0.54 Score=48.54 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=38.2
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeC-CCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFD-TEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~-~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..++++|||. ++|+++. .+.|+++++...| +...+ ..+... ...+..+++|+|| ..++|+.
T Consensus 148 ~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~g--~~~~~----------~~~~~~~~g~~p~~~~~spd---g~~l~v~ 210 (365)
T 1jof_A 148 HGMVFDPTET-YLYSADLTANKLWTHRKLASG--EVELV----------GSVDAPDPGDHPRWVAMHPT---GNYLYAL 210 (365)
T ss_dssp EEEEECTTSS-EEEEEETTTTEEEEEEECTTS--CEEEE----------EEEECSSTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCCC-EEEEEcCCCCEEEEEEECCCC--CEEEe----------eeEecCCCCCCCCEeEECCC---CCEEEEE
Confidence 7899999995 6888886 5789998753122 21100 011111 2467889999994 3367765
No 73
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.83 E-value=0.037 Score=56.30 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=49.4
Q ss_pred EEEEEec-Cce--eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 206 CLEKIGN-GSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 206 ~le~va~-Gl~--~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
+..++.. |+. ..|+|+||| +||.+ ..|++|..+.+ .+. ...++.-...|-..+..|+..+.|||
T Consensus 31 ~a~~iG~~gw~~~~~laf~P~G--~LYaV-~~G~Ly~~~~~-t~~--------~~~W~~s~t~IG~~Gw~~F~a~~fD~- 97 (236)
T 1tl2_A 31 RATLIGKGGWSNFKFLFLSPGG--ELYGV-LNDKIYKGTPP-THD--------NDNWMGRAKKIGNGGWNQFQFLFFDP- 97 (236)
T ss_dssp HSEEEESSSCTTCSEEEECTTS--CEEEE-ETTEEEEESCC-CST--------TCCHHHHCEEEECSCGGGCSEEEECT-
T ss_pred hccccCccccccceeEEECCCc--cEEEE-eCCeEEEECCC-CCC--------cccccccccEecccccccceEEEECC-
Confidence 5566666 444 689999999 79999 99999987632 221 12233322344444667799999998
Q ss_pred CCCCCEEEEE
Q 005466 283 FAKNGRFFAS 292 (695)
Q Consensus 283 F~~Ng~~Yvs 292 (695)
||.||+.
T Consensus 98 ---~G~LYav 104 (236)
T 1tl2_A 98 ---NGYLYAV 104 (236)
T ss_dssp ---TSCEEEE
T ss_pred ---CCCEEEe
Confidence 8999998
No 74
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.66 E-value=0.066 Score=55.43 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=79.0
Q ss_pred eeEEEcCCCCceEEEEeeCc-eEEEEEcc--CCCCCceeeecCCCCCcCCcCceeeCCCC-ceeeeeeCCCCCCCCEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEG-KIWLATIP--EQGLGETMELDASSPFADLTDEVHFDTEF-GLMGMAFHPNFAKNGRFFA 291 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G-~V~~~~~p--~~gsg~~l~~~~~~pflDl~~~V~~~~E~-GLLGiAfhPdF~~Ng~~Yv 291 (695)
-+|++.|||. +||+++..| +||.++.. .++. +. ..+.+. .+...++. ..-|||++| +|.+|+
T Consensus 198 ~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~---~~--~~~~~~----~~~~~g~~g~pdgia~d~----~G~l~v 263 (343)
T 2qe8_A 198 NGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQ---LT--DAELGS----KIERYSEKPICDGISIDK----DHNIYV 263 (343)
T ss_dssp EEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTT---CC--HHHHHT----TCEEEEECCSCSCEEECT----TCCEEE
T ss_pred ceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCC---CC--hhhhhc----ceEecccCCCCceEEECC----CCCEEE
Confidence 4699999995 799999866 78877521 0110 00 000011 11111223 346899997 588998
Q ss_pred EEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCCCCCc
Q 005466 292 SFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGH 371 (695)
Q Consensus 292 sYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P~~~H 371 (695)
.-... .+|.+|.... .+.+++.. .| ...
T Consensus 264 a~~~~------------------------------------~~V~~~d~~~-------------G~~~~~~~--~~-~~~ 291 (343)
T 2qe8_A 264 GDLAH------------------------------------SAIGVITSAD-------------RAYKLLVT--DE-KLS 291 (343)
T ss_dssp EEGGG------------------------------------TEEEEEETTT-------------TEEEEEEE--CG-GGS
T ss_pred EccCC------------------------------------CeEEEEECCC-------------CCEEEEEE--CC-cee
Confidence 75421 2777886411 12334443 22 123
Q ss_pred cccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCC
Q 005466 372 HGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 419 (695)
Q Consensus 372 ~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg 419 (695)
+--.|.|++ ||.|||+....... -.|+...++....+.|+|++++.
T Consensus 292 ~p~~va~~~-~g~l~v~~~~~~~~-~~f~~~~~~~~~~~~i~~~~~~~ 337 (343)
T 2qe8_A 292 WTDSFNFGS-DGYLYFDCNQLHHS-APLNAGENISAPPYYIFRLKPLA 337 (343)
T ss_dssp CEEEEEECT-TSCEEEEECCGGGS-GGGBTTCCCCCSCEEEEEECCSS
T ss_pred cCCeeEECC-CCcEEEEeCccccc-cccccCCCcCcCCeEEEEEECCC
Confidence 455799999 99999998754221 11333456666678999998764
No 75
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.47 E-value=0.29 Score=52.25 Aligned_cols=68 Identities=18% Similarity=0.151 Sum_probs=45.0
Q ss_pred ccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCC-eeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCC
Q 005466 373 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLL-GKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 451 (695)
Q Consensus 373 GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~-GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~p 451 (695)
.-.|+.++ +|..||+-- .. ++|+|+++||+. .
T Consensus 139 ~nDvavD~-~GnaYVt~s-----------------~~~~~I~rV~pdG~~-----------------------------~ 171 (334)
T 2p9w_A 139 VVQSAQDR-DGNSYVAFA-----------------LGMPAIARVSADGKT-----------------------------V 171 (334)
T ss_dssp EEEEEECT-TSCEEEEEE-----------------ESSCEEEEECTTSCC-----------------------------E
T ss_pred CceeEECC-CCCEEEeCC-----------------CCCCeEEEEeCCCCE-----------------------------E
Confidence 34799999 999999621 22 789999999941 1
Q ss_pred eEEEecc------ccceeeeecCCCCCeEEEEEccCCCceeEEE
Q 005466 452 EIWALGL------RNPWRCSFDSDRPSYFMCADVGQDVYEEVDI 489 (695)
Q Consensus 452 EI~A~Gl------RNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~ 489 (695)
.+|..-. ..+-|++++|.. ..|++.|. ....-.+++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~-~g~L~~fD~ 213 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHS-NKLIAFGG-PRALTAFDV 213 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTT-TEEEEESS-SSSEEEEEC
T ss_pred eeeeecCCCcccccCcceEEEeCCC-CEEEEEcC-CCeEEEEcC
Confidence 2232222 235599999975 46888887 444455553
No 76
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.07 E-value=0.84 Score=48.17 Aligned_cols=192 Identities=13% Similarity=0.170 Sum_probs=94.9
Q ss_pred eeEEEcCC----CCceEEEEeeC--------ceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCC
Q 005466 216 LNMVAHPD----GSNRAFFSNQE--------GKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 283 (695)
Q Consensus 216 ~~m~~~pD----Gs~RlfV~Eq~--------G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF 283 (695)
.+|+++|| | +|||+... .+|+.++.. .+.. .+ +..+.+++ .+........-+|+|+|
T Consensus 76 ~gia~~pdf~~~g--~lyv~~~~~~~~~~~~~~v~r~~~~-~~~~-~~--~~~~~l~~---~~~~~~~h~~~~l~~~p-- 144 (354)
T 3a9g_A 76 LGLALHPEFPKKS--WVYLYASYFAEGGHIRNRVIRGRLD-GSTF-KL--KEVKTLID---GIPGAYIHNGGRIRFGP-- 144 (354)
T ss_dssp EEEEECTTTTTSC--EEEEEEEEECGGGCEEEEEEEEEEC-SSSC-CE--EEEEEEEE---EEECCSSCCCCCEEECT--
T ss_pred eeEEeCCCCCcCC--EEEEEEeccCCCCCcceEEEEEEEC-CCCc-Cc--CccEEEEE---cCCCCCCcCCceEEECC--
Confidence 78999998 5 89999864 678877642 2211 11 11111111 01112223346799998
Q ss_pred CCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEE
Q 005466 284 AKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFT 363 (695)
Q Consensus 284 ~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~ 363 (695)
+|++||+-... . +....-++ . ....+|.|+..++.- + ..++-...+|+.
T Consensus 145 --DG~Lyvt~G~~-~-----------~~~~~~d~---~--------~~~G~I~ri~~dG~~--p----~~npf~~~~i~a 193 (354)
T 3a9g_A 145 --DGMLYITTGDA-A-----------DPRLAQDL---S--------SLAGKILRVDEEGRP--P----ADNPFPNSPIWS 193 (354)
T ss_dssp --TSCEEEECCCT-T-----------CGGGGTCT---T--------CCSSEEEEECTTSCC--C----TTSSSTTCCEEE
T ss_pred --CCcEEEEECCC-C-----------CCccccCC---C--------CCCeEEEEEcCCCCC--C----CCCCCCCCcEEE
Confidence 68898864211 0 00000001 1 112378788764321 1 111211123454
Q ss_pred ecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCC
Q 005466 364 MGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPF 443 (695)
Q Consensus 364 ~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF 443 (695)
.+ ..+--.|.|+|.+|.||++- .+.. . .-.|-+|.. | ++|.-|.---.
T Consensus 194 ~G----~rnp~Gla~d~~~g~l~v~d--~g~~---------~---~dei~~i~~-G-------------~nyGwp~~~g~ 241 (354)
T 3a9g_A 194 YG----HRNPQGIDWHRASGVMVATE--HGPV---------G---HDEVNIILK-G-------------GNYGWPLATGK 241 (354)
T ss_dssp EC----CSCCCEEEECTTTCCEEEEE--CCSS---------S---CCEEEEECT-T-------------CBCCTTTCCSC
T ss_pred Ec----cCCcceEEEeCCCCCEEEEe--cCCC---------C---CcEEEEecC-C-------------CcCCCCcccCC
Confidence 33 23456799999669999974 2211 0 234555543 2 24543311000
Q ss_pred CCCCCCCCeEEEe--ccccceeeeecC------CCCCeEEEEEccCC
Q 005466 444 SEDSGLQPEIWAL--GLRNPWRCSFDS------DRPSYFMCADVGQD 482 (695)
Q Consensus 444 ~~~~~~~pEI~A~--GlRNP~r~sfD~------~~g~~l~~~DvG~d 482 (695)
...++..+.++.+ .+..|-+++|-+ ..| .||++|....
T Consensus 242 ~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~ 287 (354)
T 3a9g_A 242 AGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGS 287 (354)
T ss_dssp CCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTT
T ss_pred CCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCC
Confidence 0011122345555 467899999932 234 6999987654
No 77
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.02 E-value=2.9 Score=42.46 Aligned_cols=66 Identities=18% Similarity=0.386 Sum_probs=41.0
Q ss_pred EEEEEecCce-eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCC
Q 005466 206 CLEKIGNGSY-LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 283 (695)
Q Consensus 206 ~le~va~Gl~-~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF 283 (695)
++..+..+-. ..|+++|||. ++|++. .+|.|+++++ +. ++.+. .+. ......+++|+|+
T Consensus 24 ~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~d~~i~v~d~-~~--~~~~~------------~~~--~~~~v~~~~~spd- 84 (391)
T 1l0q_A 24 VTATIPVGSNPMGAVISPDGT-KVYVANAHSNDVSIIDT-AT--NNVIA------------TVP--AGSSPQGVAVSPD- 84 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSS-EEEEEEGGGTEEEEEET-TT--TEEEE------------EEE--CSSSEEEEEECTT-
T ss_pred EEEEeecCCCcceEEECCCCC-EEEEECCCCCeEEEEEC-CC--CeEEE------------EEE--CCCCccceEECCC-
Confidence 3444443333 7899999995 577776 6899999874 22 22221 111 1237889999984
Q ss_pred CCCCEEEEE
Q 005466 284 AKNGRFFAS 292 (695)
Q Consensus 284 ~~Ng~~Yvs 292 (695)
..++|+.
T Consensus 85 --g~~l~~~ 91 (391)
T 1l0q_A 85 --GKQVYVT 91 (391)
T ss_dssp --SSEEEEE
T ss_pred --CCEEEEE
Confidence 4467665
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.97 E-value=1.5 Score=43.56 Aligned_cols=67 Identities=13% Similarity=0.200 Sum_probs=38.9
Q ss_pred EEEEecCce-ee-EEEcCCCCceEEEEeeCc---eEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCC
Q 005466 207 LEKIGNGSY-LN-MVAHPDGSNRAFFSNQEG---KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 281 (695)
Q Consensus 207 le~va~Gl~-~~-m~~~pDGs~RlfV~Eq~G---~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhP 281 (695)
+..+..+.. .. ++++|||. ++++....| .|+++++ +. ++.++ .+ ....+..+++|+|
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~-~~--~~~~~------------~~--~~~~~~~~~~~sp 137 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSF-LK--NKFIS------------TI--PIPYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEET-TT--TEEEE------------EE--ECCTTEEEEEECT
T ss_pred EEecccCCCCccceEECCCCC-EEEEecCCCCcccEEEEEC-CC--CCeEE------------EE--ECCCCccceEECC
Confidence 444444444 56 99999995 566555453 8999874 22 22221 11 1123467999998
Q ss_pred CCCCCCEEEEEEe
Q 005466 282 NFAKNGRFFASFN 294 (695)
Q Consensus 282 dF~~Ng~~YvsYs 294 (695)
+ ..++|+.-.
T Consensus 138 d---g~~l~~~~~ 147 (331)
T 3u4y_A 138 N---GNGLILIDR 147 (331)
T ss_dssp T---SSCEEEEEE
T ss_pred C---CCEEEEEec
Confidence 4 235777543
No 79
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.73 E-value=4.1 Score=45.26 Aligned_cols=74 Identities=8% Similarity=-0.010 Sum_probs=47.6
Q ss_pred CcEEEEEecCce-eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 204 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
|-++.++..|.. ..++++|||. ++|++.++|.|+++++. ..+++.+ ..+. ...+..++||+|-
T Consensus 169 ~~~~~~i~~g~~~~~v~~spdg~-~l~v~~~d~~V~v~D~~-~~t~~~~------------~~i~--~g~~p~~va~sp~ 232 (543)
T 1nir_A 169 KKIVKVIDTGYAVHISRMSASGR-YLLVIGRDARIDMIDLW-AKEPTKV------------AEIK--IGIEARSVESSKF 232 (543)
T ss_dssp CCEEEEEECSTTEEEEEECTTSC-EEEEEETTSEEEEEETT-SSSCEEE------------EEEE--CCSEEEEEEECCS
T ss_pred ceEEEEEecCcccceEEECCCCC-EEEEECCCCeEEEEECc-CCCCcEE------------EEEe--cCCCcceEEeCCC
Confidence 445666765655 6788999996 79999999999998741 1122221 1222 2346789999981
Q ss_pred CC-CCCEEEEEE
Q 005466 283 FA-KNGRFFASF 293 (695)
Q Consensus 283 F~-~Ng~~YvsY 293 (695)
=. ...++|+.-
T Consensus 233 ~~~dg~~l~v~~ 244 (543)
T 1nir_A 233 KGYEDRYTIAGA 244 (543)
T ss_dssp TTCTTTEEEEEE
T ss_pred cCCCCCEEEEEE
Confidence 00 145788754
No 80
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.61 E-value=0.53 Score=49.50 Aligned_cols=27 Identities=26% Similarity=0.297 Sum_probs=22.7
Q ss_pred EEEEEecCce--eeEEEcC-CCCceEEEEeeC
Q 005466 206 CLEKIGNGSY--LNMVAHP-DGSNRAFFSNQE 234 (695)
Q Consensus 206 ~le~va~Gl~--~~m~~~p-DGs~RlfV~Eq~ 234 (695)
..|.++.|++ +.|++.| +| +|||+|..
T Consensus 193 ~~~i~a~G~rnp~g~a~d~~~g--~l~v~d~g 222 (352)
T 2ism_A 193 RPEVYSLGHRNPQGLAWHPKTG--ELFSSEHG 222 (352)
T ss_dssp CTTEEEECCSEECCCEECTTTC--CEEEEEEC
T ss_pred CccEEEEcCCCcccEEEECCCC--CEEEEEcC
Confidence 5678899998 9999999 56 79999963
No 81
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.60 E-value=4.5 Score=41.15 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=36.7
Q ss_pred eeEEEcCCCCceEEE-EeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFF-SNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV-~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
-+|++.||+ ++||+ .++.++|+.++. + ++.++ .+...+..-+=|||+.+ ++++||+
T Consensus 30 SGla~~~~~-~~L~aV~d~~~~I~~ld~-~---g~v~~------------~i~l~g~~D~EGIa~~~----~g~~~vs 86 (255)
T 3qqz_A 30 SSLTWSAQS-NTLFSTINKPAAIVEMTT-N---GDLIR------------TIPLDFVKDLETIEYIG----DNQFVIS 86 (255)
T ss_dssp EEEEEETTT-TEEEEEEETTEEEEEEET-T---CCEEE------------EEECSSCSSEEEEEECS----TTEEEEE
T ss_pred ceeEEeCCC-CEEEEEECCCCeEEEEeC-C---CCEEE------------EEecCCCCChHHeEEeC----CCEEEEE
Confidence 679999986 48996 667899998863 2 33332 22223334567888874 7787776
No 82
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.41 E-value=1.6 Score=44.83 Aligned_cols=33 Identities=6% Similarity=-0.081 Sum_probs=28.2
Q ss_pred cceeeeecCCCCCeEEEEEccCCCceeEEEeecC
Q 005466 460 NPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRG 493 (695)
Q Consensus 460 NP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~kG 493 (695)
-|.|++||+++. +||++.-.++..=||+++...
T Consensus 207 v~nGIa~~~~~~-~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 207 VLNGIAWDQENK-RIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEEECC
T ss_pred ceEEEEEcCCCC-EEEEECCCCCeEEEEEEeccc
Confidence 357999999865 799999999988999998864
No 83
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.81 E-value=1 Score=47.42 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=30.8
Q ss_pred CCCeEEEeccccceeeeecCCCCCe-EEEEEccCCCceeEEEeec
Q 005466 449 LQPEIWALGLRNPWRCSFDSDRPSY-FMCADVGQDVYEEVDIITR 492 (695)
Q Consensus 449 ~~pEI~A~GlRNP~r~sfD~~~g~~-l~~~DvG~d~~EEIn~I~k 492 (695)
..-|++|-|+.+|+.++|+|.. + ||++|.. .+|.++..
T Consensus 8 ~~~~~va~~l~~P~~i~~~pdG--~~l~V~e~~----G~i~~~~~ 46 (353)
T 2g8s_A 8 VNVEVLQDKLDHPWALAFLPDN--HGMLITLRG----GELRHWQA 46 (353)
T ss_dssp SEEEEEEEEESSEEEEEECSTT--CCEEEEETT----TEEEEEET
T ss_pred cEEEEEECCCCCcEEEEEcCCC--CEEEEEeCC----ceEEEEeC
Confidence 3568999999999999999974 6 9999974 36777753
No 84
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.81 E-value=6.4 Score=39.89 Aligned_cols=68 Identities=15% Similarity=0.355 Sum_probs=42.1
Q ss_pred CcEEEEEecCce-eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCC
Q 005466 204 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 281 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhP 281 (695)
|-.+..+..+-. ..|++.|||. +++++.. +|.|+++++ +. ++.+. ......+..+++|+|
T Consensus 64 ~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~v~v~d~-~~--~~~~~--------------~~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 64 NNVIATVPAGSSPQGVAVSPDGK-QVYVTNMASSTLSVIDT-TS--NTVAG--------------TVKTGKSPLGLALSP 125 (391)
T ss_dssp TEEEEEEECSSSEEEEEECTTSS-EEEEEETTTTEEEEEET-TT--TEEEE--------------EEECSSSEEEEEECT
T ss_pred CeEEEEEECCCCccceEECCCCC-EEEEEECCCCEEEEEEC-CC--CeEEE--------------EEeCCCCcceEEECC
Confidence 334444443334 7899999995 6878775 599999874 22 22221 011234678999998
Q ss_pred CCCCCCEEEEE
Q 005466 282 NFAKNGRFFAS 292 (695)
Q Consensus 282 dF~~Ng~~Yvs 292 (695)
+ ..++|++
T Consensus 126 d---g~~l~~~ 133 (391)
T 1l0q_A 126 D---GKKLYVT 133 (391)
T ss_dssp T---SSEEEEE
T ss_pred C---CCEEEEE
Confidence 5 4457665
No 85
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.69 E-value=1.1 Score=49.19 Aligned_cols=40 Identities=8% Similarity=0.138 Sum_probs=31.3
Q ss_pred CCCCeEEEeccccceeeeecCCCCCeEEEEEccCCCceeEEEeec
Q 005466 448 GLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITR 492 (695)
Q Consensus 448 ~~~pEI~A~GlRNP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~k 492 (695)
+...|++|-||.+||.++|+|. | +||++|... .+|.+|..
T Consensus 16 gf~~~~~a~~l~~P~~~a~~pd-G-~l~V~e~~g---g~I~~~~~ 55 (454)
T 1cru_A 16 NFDKKVILSNLNKPHALLWGPD-N-QIWLTERAT---GKILRVNP 55 (454)
T ss_dssp TSCEEEEECCCSSEEEEEECTT-S-CEEEEETTT---CEEEEECT
T ss_pred CeEEEEEECCCCCceEEEEcCC-C-cEEEEEcCC---CEEEEEEC
Confidence 3467999999999999999997 4 599998643 35666653
No 86
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.59 E-value=4.1 Score=41.48 Aligned_cols=65 Identities=14% Similarity=0.215 Sum_probs=40.6
Q ss_pred eeEEEcCCCCceEEEE-eeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFS-NQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~-Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
=++++.++| +++|+ |+.++|+++.+..++....++ . .. +++. ......|+=|||++|+ +++||+.
T Consensus 73 EGIa~~~~g--~~~vs~E~~~~l~~~~v~~~~~i~~~~--~-~~-~~~~---~~~~N~g~EGLA~d~~---~~~L~va 138 (255)
T 3qqz_A 73 ETIEYIGDN--QFVISDERDYAIYVISLTPNSEVKILK--K-IK-IPLQ---ESPTNCGFEGLAYSRQ---DHTFWFF 138 (255)
T ss_dssp EEEEECSTT--EEEEEETTTTEEEEEEECTTCCEEEEE--E-EE-CCCS---SCCCSSCCEEEEEETT---TTEEEEE
T ss_pred HHeEEeCCC--EEEEEECCCCcEEEEEcCCCCeeeeee--e-ec-cccc---cccccCCcceEEEeCC---CCEEEEE
Confidence 567888888 78777 468899988775443211111 1 10 1110 1234688999999985 6789985
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.42 E-value=6.4 Score=38.61 Aligned_cols=59 Identities=14% Similarity=0.276 Sum_probs=36.7
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..++++|||. ++|++.. .|.|+++++. ++. ..+. ...........+++|+|+ ..++|+.
T Consensus 87 ~~~~~s~dg~-~l~~~~~~~~~i~~~d~~-~~~--~~~~-----------~~~~~~~~~~~~~~~s~d---g~~l~~~ 146 (343)
T 1ri6_A 87 THISTDHQGQ-FVFVGSYNAGNVSVTRLE-DGL--PVGV-----------VDVVEGLDGCHSANISPD---NRTLWVP 146 (343)
T ss_dssp SEEEECTTSS-EEEEEETTTTEEEEEEEE-TTE--EEEE-----------EEEECCCTTBCCCEECTT---SSEEEEE
T ss_pred cEEEEcCCCC-EEEEEecCCCeEEEEECC-CCc--cccc-----------cccccCCCCceEEEECCC---CCEEEEe
Confidence 7899999995 5888876 7889988753 222 1110 001122345788999984 3357664
No 88
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.28 E-value=3.1 Score=44.36 Aligned_cols=198 Identities=12% Similarity=0.137 Sum_probs=97.4
Q ss_pred ecCce--eeEEEcCC--CCceEEEEe---eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCC
Q 005466 211 GNGSY--LNMVAHPD--GSNRAFFSN---QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 283 (695)
Q Consensus 211 a~Gl~--~~m~~~pD--Gs~RlfV~E---q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF 283 (695)
+.|.. ..|+++|| ..++|||.- ...+|..+++.+ +....-++...+.+++- +.......--.|+|.|
T Consensus 76 ~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~-~~~~~~~~~~~~~i~~~---~p~~~~H~g~~l~fgp-- 149 (347)
T 3das_A 76 PSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDE-KKPSGEQLGAPDTVFRG---IPKGVIHNGGRIAFGP-- 149 (347)
T ss_dssp CBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCT-TSCTTCCBCCCEEEEEE---ECCCSSCCCCCEEECT--
T ss_pred ecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCC-CCcccccCCCcEEEEEc---CCCCCCccCccccCCC--
Confidence 34555 89999996 112799863 356777776422 11000011111111110 1112233445699998
Q ss_pred CCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEE
Q 005466 284 AKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFT 363 (695)
Q Consensus 284 ~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~ 363 (695)
+|+|||+--... |. +...++. .....|.|++.+++- + ..++-...+|+.
T Consensus 150 --DG~Lyvt~Gd~~------------~~---~~~qd~~--------~~~G~IlRi~~dG~i--p----~~nPf~~~~i~a 198 (347)
T 3das_A 150 --DKMLYAGTGESG------------DT---GLSQDRK--------SLGGKILRMTPDGEP--A----PGNPFPGSPVYS 198 (347)
T ss_dssp --TSCEEEECBCTT------------CG---GGTTCTT--------CSTTCEEEECTTSSB--C----TTCSSTTCCEEE
T ss_pred --CCCEEEEECCCC------------CC---ccccCCC--------CCCCEEEEEeCCCCc--c----CCCCCCCCeEEe
Confidence 588988643211 00 0000111 112367777654321 1 112211123554
Q ss_pred ecCCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCC
Q 005466 364 MGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPF 443 (695)
Q Consensus 364 ~~~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF 443 (695)
. +-.|--.|.|+| +|.||++- .+. +. .-.|-+|.. | ++|.=|.---.
T Consensus 199 ~----G~RNp~Gla~dp-~G~L~~~d--~g~---------~~---~deln~i~~-G-------------~nyGwP~~~g~ 245 (347)
T 3das_A 199 Y----GHRNVQGLAWDD-KQRLFASE--FGQ---------DT---WDELNAIKP-G-------------DNYGWPEAEGK 245 (347)
T ss_dssp B----CCSBCCEEEECT-TCCEEEEE--CCS---------SS---CEEEEEECT-T-------------CBCCTTTCCSS
T ss_pred e----CCCCcceEEECC-CCCEEEEe--cCC---------CC---CceeeEEcC-C-------------CEecCCcccCC
Confidence 3 234566799999 99999864 221 11 244666643 2 25554421110
Q ss_pred CCCCCCCCeEEEecc--ccceeeeecCCCCCeEEEEEccC
Q 005466 444 SEDSGLQPEIWALGL--RNPWRCSFDSDRPSYFMCADVGQ 481 (695)
Q Consensus 444 ~~~~~~~pEI~A~Gl--RNP~r~sfD~~~g~~l~~~DvG~ 481 (695)
...++..+-++.|+. --|-+|+|.. + .+|.++...
T Consensus 246 ~~~~~~~~P~~~~~~~~~ap~G~~~~~--g-~~~~~~l~~ 282 (347)
T 3das_A 246 GGGSGFHDPVAQWSTDEASPSGIAYAE--G-SVWMAGLRG 282 (347)
T ss_dssp CCCTTCCCCSEEECTTTCCEEEEEEET--T-EEEEEESTT
T ss_pred CCCccccCCcEecCCCCCCCcceEEEc--C-ceeeccccC
Confidence 111233445677765 4799999974 4 588887643
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.88 E-value=2.2 Score=43.23 Aligned_cols=63 Identities=16% Similarity=0.284 Sum_probs=38.0
Q ss_pred eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..|+++|||. ++||+. ..+.|+++++. .+.-+.++ .+ ........+..+++|+|| ..++|++-
T Consensus 214 ~~~~~spdg~-~l~v~~~~~~~v~v~~~~-~g~~~~~~--------~~--~~~~~~~~~~~~i~~spd---g~~l~v~~ 277 (361)
T 3scy_A 214 RHLIFNSDGK-FAYLINEIGGTVIAFRYA-DGMLDEIQ--------TV--AADTVNAQGSGDIHLSPD---GKYLYASN 277 (361)
T ss_dssp EEEEECTTSS-EEEEEETTTCEEEEEEEE-TTEEEEEE--------EE--ESCSSCCCCEEEEEECTT---SSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCCeEEEEEec-CCceEEeE--------EE--ecCCCCCCCcccEEECCC---CCEEEEEC
Confidence 7899999995 688888 48999988753 22211110 00 001122355689999984 33576653
No 90
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.18 E-value=5.1 Score=44.48 Aligned_cols=59 Identities=10% Similarity=0.194 Sum_probs=36.5
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..++++|||. +++|+.+ .|+|++++..+ + +.+. + ..+ .....+.+++|+|+ ..+||+.-
T Consensus 283 ~~i~~s~~~~-~~~vs~~~~g~i~vvd~~~-~--~~l~---------~-~~i--~~~~~~~~~~~spd---g~~l~va~ 342 (543)
T 1nir_A 283 AAIIASHEHP-EFIVNVKETGKVLLVNYKD-I--DNLT---------V-TSI--GAAPFLHDGGWDSS---HRYFMTAA 342 (543)
T ss_dssp EEEEECSSSS-EEEEEETTTTEEEEEECTT-S--SSCE---------E-EEE--ECCSSCCCEEECTT---SCEEEEEE
T ss_pred EEEEECCCCC-EEEEEECCCCeEEEEEecC-C--Ccce---------e-EEe--ccCcCccCceECCC---CCEEEEEe
Confidence 5788999885 5666665 69999987422 1 1111 0 011 22456889999994 34577754
No 91
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=91.23 E-value=5.5 Score=40.84 Aligned_cols=22 Identities=5% Similarity=0.086 Sum_probs=17.3
Q ss_pred cceeee-ecCCCCCeEEEEEccCC
Q 005466 460 NPWRCS-FDSDRPSYFMCADVGQD 482 (695)
Q Consensus 460 NP~r~s-fD~~~g~~l~~~DvG~d 482 (695)
.|..++ |+|.. .+||+++.+.+
T Consensus 255 ~~~~i~~~spdG-~~l~v~~~~~~ 277 (365)
T 1jof_A 255 YRADVCALTFSG-KYMFASSRANK 277 (365)
T ss_dssp EEEEEEEECTTS-SEEEEEEEESS
T ss_pred ccccEEEECCCC-CEEEEECCCCC
Confidence 578899 99974 57999987764
No 92
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.04 E-value=14 Score=37.04 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=39.4
Q ss_pred cCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCCCCCCCCccceEEEcCCCcEEEEeCC-----
Q 005466 560 FGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTSD----- 634 (695)
Q Consensus 560 ~G~yifgD~~sg~lw~l~~~p~~sG~~~~~~i~f~c~~~~P~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts~----- 634 (695)
.|.+++++...+++..+. |+ +|+.. .++. .. ..++. .+..+.+....++|.+||.+.+
T Consensus 175 ~g~~~v~~~~~~~v~~~d--~~-tG~~~-w~~~-----~~-----~~~~~---~l~~~~~~~~~~~G~i~v~~~~g~~~~ 237 (276)
T 3no2_A 175 NGDCLVACGDAHCFVQLN--LE-SNRIV-RRVN-----AN-----DIEGV---QLFFVAQLFPLQNGGLYICNWQGHDRE 237 (276)
T ss_dssp TSCEEEECBTTSEEEEEC--TT-TCCEE-EEEE-----GG-----GSBSC---CCSEEEEEEECTTSCEEEEEECTTCTT
T ss_pred CCCEEEEeCCCCeEEEEe--Cc-CCcEE-EEec-----CC-----CCCCc---cccccccceEcCCCCEEEEeccCcccc
Confidence 467777777667776664 32 35432 1110 00 00111 1346788999999999999842
Q ss_pred -------eEEEEecCCC
Q 005466 635 -------GVYRVVRPSR 644 (695)
Q Consensus 635 -------gIYRIv~ps~ 644 (695)
.+++|.+...
T Consensus 238 ~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 238 AGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp GGGSCCCSEEEECTTSB
T ss_pred ccccCCceEEEECCCCC
Confidence 3888765443
No 93
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.30 E-value=18 Score=37.13 Aligned_cols=67 Identities=7% Similarity=0.161 Sum_probs=40.1
Q ss_pred EEEEEecCce-eeEEEcCCCCceEEEEee--------CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceee
Q 005466 206 CLEKIGNGSY-LNMVAHPDGSNRAFFSNQ--------EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 276 (695)
Q Consensus 206 ~le~va~Gl~-~~m~~~pDGs~RlfV~Eq--------~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLG 276 (695)
.+..+..+-. ..|++.|||. +++++.. +|.|+++++. . ++.+. .+ .......+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~-~--~~~~~------------~~--~~~~~~~~ 307 (433)
T 3bws_A 246 EIRKTDKIGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMD-K--EKLID------------TI--GPPGNKRH 307 (433)
T ss_dssp EEEECCCCSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETT-T--TEEEE------------EE--EEEECEEE
T ss_pred EEEEecCCCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECC-C--CcEEe------------ec--cCCCCcce
Confidence 3444433333 7899999995 6888874 7899998742 2 22221 11 11235678
Q ss_pred eeeCCCCCCCCEEEEEE
Q 005466 277 MAFHPNFAKNGRFFASF 293 (695)
Q Consensus 277 iAfhPdF~~Ng~~YvsY 293 (695)
++|+|+ ..++|+.-
T Consensus 308 ~~~~~~---g~~l~~~~ 321 (433)
T 3bws_A 308 IVSGNT---ENKIYVSD 321 (433)
T ss_dssp EEECSS---TTEEEEEE
T ss_pred EEECCC---CCEEEEEe
Confidence 999984 34677754
No 94
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.83 E-value=9.2 Score=39.47 Aligned_cols=23 Identities=0% Similarity=-0.265 Sum_probs=17.0
Q ss_pred cceeeeecCCCCCeEEEEEccCCC
Q 005466 460 NPWRCSFDSDRPSYFMCADVGQDV 483 (695)
Q Consensus 460 NP~r~sfD~~~g~~l~~~DvG~d~ 483 (695)
.+-|+|||+++. +||++.=-|..
T Consensus 236 vlNGIA~dp~~~-rlfVTGK~Wp~ 258 (268)
T 3nok_A 236 VLNGIAVEPGSG-RIFMTGKLWPR 258 (268)
T ss_dssp CEEEEEECTTTC-CEEEEETTCSE
T ss_pred ceEEEEEcCCCC-EEEEeCCCCCc
Confidence 567999999876 79997544433
No 95
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.04 E-value=17 Score=37.26 Aligned_cols=31 Identities=6% Similarity=-0.033 Sum_probs=24.0
Q ss_pred cceeeeecCCCCCeEEEEEccCCCceeEEEee
Q 005466 460 NPWRCSFDSDRPSYFMCADVGQDVYEEVDIIT 491 (695)
Q Consensus 460 NP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I~ 491 (695)
-|-|+||||++. +||++-=-|...=||.++.
T Consensus 226 vlNGIA~dp~~~-~lfVTGK~Wp~~~ev~~~~ 256 (262)
T 3nol_A 226 VLNGIAWDKEHH-RLFVTGKLWPKVFEITLTQ 256 (262)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEEE
T ss_pred ceEEEEEcCCCC-EEEEECCCCCceEEEEEec
Confidence 467999999875 7999877776666776664
No 96
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=88.97 E-value=18 Score=38.13 Aligned_cols=26 Identities=23% Similarity=0.406 Sum_probs=19.5
Q ss_pred eeEEEcCCCCceEEEEeeC---ceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQE---GKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~---G~V~~~~~ 242 (695)
..++++|||. ++..+..+ ..|+++++
T Consensus 182 ~~~~~Spdg~-~la~~s~~~~~~~i~~~d~ 210 (415)
T 2hqs_A 182 MSPAWSPDGS-KLAYVTFESGRSALVIQTL 210 (415)
T ss_dssp EEEEECTTSS-EEEEEECTTSSCEEEEEET
T ss_pred eeeEEcCCCC-EEEEEEecCCCcEEEEEEC
Confidence 7899999996 56555554 38998875
No 97
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.16 E-value=3.9 Score=43.51 Aligned_cols=20 Identities=25% Similarity=0.529 Sum_probs=16.5
Q ss_pred CceeeeeeCCCCCCCCEEEEEEee
Q 005466 272 FGLMGMAFHPNFAKNGRFFASFNC 295 (695)
Q Consensus 272 ~GLLGiAfhPdF~~Ng~~YvsYs~ 295 (695)
.|.-|||++| +|..||.-+.
T Consensus 137 ~~~nDvavD~----~GnaYVt~s~ 156 (334)
T 2p9w_A 137 FGVVQSAQDR----DGNSYVAFAL 156 (334)
T ss_dssp EEEEEEEECT----TSCEEEEEEE
T ss_pred cCCceeEECC----CCCEEEeCCC
Confidence 4689999996 7999998663
No 98
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.06 E-value=38 Score=37.98 Aligned_cols=75 Identities=11% Similarity=-0.004 Sum_probs=47.0
Q ss_pred CcEEEEEecCce-eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 204 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
+=.+.+|..|.. ..++++|||. ++||+.++|.|.++++. ..+++.+ .++.. ..+..+|+|+|-
T Consensus 187 ~~v~~~i~~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~-~~t~~~v------------~~i~~--G~~P~~ia~s~~ 250 (567)
T 1qks_A 187 YEIKTVLDTGYAVHISRLSASGR-YLFVIGRDGKVNMIDLW-MKEPTTV------------AEIKI--GSEARSIETSKM 250 (567)
T ss_dssp CCEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEETT-SSSCCEE------------EEEEC--CSEEEEEEECCS
T ss_pred CeEEEEEeCCCCccceEECCCCC-EEEEEcCCCeEEEEECC-CCCCcEe------------EEEec--CCCCceeEEccc
Confidence 334556666655 6899999995 79999999999998742 1122211 12322 235789999931
Q ss_pred CC-CCCEEEEEEe
Q 005466 283 FA-KNGRFFASFN 294 (695)
Q Consensus 283 F~-~Ng~~YvsYs 294 (695)
-. ...++||.-.
T Consensus 251 ~~pDGk~l~v~n~ 263 (567)
T 1qks_A 251 EGWEDKYAIAGAY 263 (567)
T ss_dssp TTCTTTEEEEEEE
T ss_pred cCCCCCEEEEEEc
Confidence 11 2457888643
No 99
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=87.71 E-value=27 Score=35.78 Aligned_cols=57 Identities=11% Similarity=0.060 Sum_probs=37.2
Q ss_pred eeEEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..+++.|||. ++|++. .+|.|+++++ .. ++.+. ......+..+++++|+ ..++|+.-
T Consensus 215 ~~~~~~~~~~-~l~~~~~~~~~i~~~d~-~~--~~~~~--------------~~~~~~~~~~~~~~~~---g~~l~~~~ 272 (433)
T 3bws_A 215 KILLYDPIRD-LVYCSNWISEDISVIDR-KT--KLEIR--------------KTDKIGLPRGLLLSKD---GKELYIAQ 272 (433)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEET-TT--TEEEE--------------ECCCCSEEEEEEECTT---SSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEecCCCcEEEEEC-CC--CcEEE--------------EecCCCCceEEEEcCC---CCEEEEEE
Confidence 7899999996 687887 6899999874 22 22221 0112345789999984 34666644
No 100
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=86.91 E-value=14 Score=36.45 Aligned_cols=76 Identities=11% Similarity=0.077 Sum_probs=47.7
Q ss_pred EEEecCce---eeEEEcCC---CCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCC
Q 005466 208 EKIGNGSY---LNMVAHPD---GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 281 (695)
Q Consensus 208 e~va~Gl~---~~m~~~pD---Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhP 281 (695)
+.+..|-. ..++|+|+ +...++++...|.|+++++.. ++.++ -+........+.....++|+|
T Consensus 11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~---~~~~~--------~~~~~~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS---QGEIR--------LLQSYVDADADENFYTCAWTY 79 (366)
T ss_dssp EEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG---GGCEE--------EEEEEECSCTTCCEEEEEEEE
T ss_pred EEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC---CcEEE--------eeeeccccCCCCcEEEEEecc
Confidence 45555543 78999985 666788888899999987532 12111 000000112346789999999
Q ss_pred CCCCCCEEEEEEe
Q 005466 282 NFAKNGRFFASFN 294 (695)
Q Consensus 282 dF~~Ng~~YvsYs 294 (695)
+-..+|.+.++-+
T Consensus 80 ~~~~~~~~l~~~~ 92 (366)
T 3k26_A 80 DSNTSHPLLAVAG 92 (366)
T ss_dssp CTTTCCEEEEEEE
T ss_pred CCCCCCCEEEEec
Confidence 8877777666543
No 101
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=86.83 E-value=29 Score=35.34 Aligned_cols=25 Identities=12% Similarity=0.155 Sum_probs=20.3
Q ss_pred eeEEEcCCCCceEEEEee---CceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQ---EGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq---~G~V~~~~~ 242 (695)
-+|++.||| ++|++.- .+.|++++.
T Consensus 24 ~Gl~~~~dg--~Lyvstg~~~~s~v~~iD~ 51 (266)
T 2iwa_A 24 QGLVYAEND--TLFESTGLYGRSSVRQVAL 51 (266)
T ss_dssp EEEEECSTT--EEEEEECSTTTCEEEEEET
T ss_pred ccEEEeCCC--eEEEECCCCCCCEEEEEEC
Confidence 589999997 8999863 578999874
No 102
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=86.50 E-value=1.6 Score=49.88 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=47.2
Q ss_pred EEEEecCce-eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCC--CceeeeeeCCC
Q 005466 207 LEKIGNGSY-LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTE--FGLMGMAFHPN 282 (695)
Q Consensus 207 le~va~Gl~-~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E--~GLLGiAfhPd 282 (695)
+..|..|.. -++.++|||. ++||+.+ ...|.+++... .+.+ ++ --|+..+.|...-+ .|.+.+||||
T Consensus 270 ~~~Ipvg~~PhGv~~sPDGk-~v~V~~~~s~~VsVid~~~---~~~~-~~---~~l~~~~~v~~~v~vG~gP~h~aF~~- 340 (595)
T 1fwx_A 270 TRYIPIANNPHGCNMAPDKK-HLCVAGKLSPTVTVLDVTR---FDAV-FY---ENADPRSAVVAEPELGLGPLHTAFDG- 340 (595)
T ss_dssp EEEEEEESSCCCEEECTTSS-EEEEECTTSSBEEEEEGGG---HHHH-HH---SCCCGGGGEEECCBCCSCEEEEEECT-
T ss_pred EEEEecCCCceEEEEcCCCC-EEEEeCCCCCeEEEEECcc---cccc-cc---cccCcccceEEEcCCCCCcceEEECC-
Confidence 344544544 7799999996 7999987 68899887521 1100 00 01344444543333 6789999998
Q ss_pred CCCCCEEEEEE
Q 005466 283 FAKNGRFFASF 293 (695)
Q Consensus 283 F~~Ng~~YvsY 293 (695)
+|++|++-
T Consensus 341 ---dG~aY~t~ 348 (595)
T 1fwx_A 341 ---RGNAYTSL 348 (595)
T ss_dssp ---TSEEEEEE
T ss_pred ---CCeEEEEE
Confidence 67777764
No 103
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.04 E-value=10 Score=38.84 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=36.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..+++.|++...+.....+|.|+++++. . ++.+. .+. ....+.....++|+|+ ++.++++
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~-~--~~~~~------~~~-----~~~~~~~v~~v~~sp~---~~~~la~ 244 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTR-K--PKPAT------RID-----FCASDTIPTSVTWHPE---KDDTFAC 244 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTT-S--SSCBC------BCC-----CTTCCSCEEEEEECTT---STTEEEE
T ss_pred EEEEEccCCCceeeeeccCCceEEEECC-C--Cceee------eee-----eccccccccchhhhhc---ccceEEE
Confidence 6789999986556667789999998642 2 22110 011 1123345788999985 4445544
No 104
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=85.81 E-value=26 Score=34.24 Aligned_cols=62 Identities=15% Similarity=0.141 Sum_probs=41.4
Q ss_pred CcEEEEEecCce---eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeC
Q 005466 204 GLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 280 (695)
Q Consensus 204 G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfh 280 (695)
.+.++....|-. ..++++|||. +++.+..+|.|+++++. ++ +.. ........+...++|+
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~-~~--~~~-------------~~~~~h~~~v~~~~~~ 74 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAY-DG--KFE-------------KTISGHKLGISDVAWS 74 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETT-TC--CEE-------------EEECCCSSCEEEEEEC
T ss_pred CceeEEEEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCC-Cc--ccc-------------hhhccCCCceEEEEEc
Confidence 456666555543 7899999995 67777789999998742 22 111 1122345678999999
Q ss_pred CC
Q 005466 281 PN 282 (695)
Q Consensus 281 Pd 282 (695)
|+
T Consensus 75 ~~ 76 (312)
T 4ery_A 75 SD 76 (312)
T ss_dssp TT
T ss_pred CC
Confidence 84
No 105
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=85.09 E-value=33 Score=34.71 Aligned_cols=30 Identities=10% Similarity=0.116 Sum_probs=21.7
Q ss_pred cceeeeecCCCCCeEEEEEccCCCceeEEEe
Q 005466 460 NPWRCSFDSDRPSYFMCADVGQDVYEEVDII 490 (695)
Q Consensus 460 NP~r~sfD~~~g~~l~~~DvG~d~~EEIn~I 490 (695)
-|-|+|||+++. +||++-=-+...=||.++
T Consensus 205 vlNGIA~d~~~~-~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 205 VLNGIAFDAEHD-RLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEC
T ss_pred ceEEEEEcCCCC-EEEEECCCCCcEEEEEEe
Confidence 467999999875 799986555555555554
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.85 E-value=9.6 Score=37.49 Aligned_cols=26 Identities=23% Similarity=0.359 Sum_probs=21.0
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~ 242 (695)
..+++.|||. ++|++.. .|.|+++++
T Consensus 46 ~~~~~s~dg~-~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 46 GTAMMAPDNR-TAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CEEEECTTSS-EEEEEETTTTEEEEEET
T ss_pred ceeEECCCCC-EEEEEeCCCCcEEEEeC
Confidence 6889999994 6888874 789999874
No 107
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=84.45 E-value=3.1 Score=42.87 Aligned_cols=58 Identities=21% Similarity=0.374 Sum_probs=34.6
Q ss_pred eeEEEcCCCCceEEEEe-e------CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCE
Q 005466 216 LNMVAHPDGSNRAFFSN-Q------EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 288 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E-q------~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~ 288 (695)
..++|+||| +++++- . +|.||++..++ + .+. ..++ ......+.+..+++|+|+ ++
T Consensus 46 ~~v~fSpDG--~~las~s~d~~~~wd~~v~~~~~~~-~--~~~-----~~~~----~~~~~~~~~V~~~~~s~d----~~ 107 (357)
T 4g56_B 46 GAVRYRRDG--ALLLAASSLSSRTWGGSIWVFKDPE-G--APN-----ESLC----TAGVQTEAGVTDVAWVSE----KG 107 (357)
T ss_dssp EEEEECSSS--CEEEEEECSSSSSCCEEEEEESSCC------C-----GGGC----SEEEECSSCEEEEEEETT----TE
T ss_pred EEEEECCCC--CEEEEEcCCCCccccCeEEEEECCC-C--Ccc-----eeEe----cccCCCCCCEEEEEEcCC----CC
Confidence 578999999 466654 3 68898886432 2 111 0010 112345678999999984 56
Q ss_pred EEE
Q 005466 289 FFA 291 (695)
Q Consensus 289 ~Yv 291 (695)
+.+
T Consensus 108 ~l~ 110 (357)
T 4g56_B 108 ILV 110 (357)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 108
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=84.20 E-value=12 Score=40.03 Aligned_cols=55 Identities=22% Similarity=0.355 Sum_probs=36.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..|+|+|||. +|..+..+|.|++++. + ++.++ ...+-+.....++|+| +|++.++
T Consensus 20 ~~~a~spdg~-~las~~~d~~v~iWd~--~--~~~~~-------------~l~gh~~~V~~l~fsp----dg~~las 74 (577)
T 2ymu_A 20 RGVAFSPDGQ-TIASASDDKTVKLWNR--N--GQLLQ-------------TLTGHSSSVWGVAFSP----DGQTIAS 74 (577)
T ss_dssp EEEEECTTSS-CEEEEETTSEEEEECT--T--SCEEE-------------EEECCSSCEEEEEECT----TSSEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEEC--C--CCEEE-------------EEeCCCCCEEEEEECC----CCCEEEE
Confidence 6899999994 4666677899999862 2 22221 1223456788999998 4555444
No 109
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.02 E-value=8.4 Score=37.94 Aligned_cols=58 Identities=7% Similarity=0.126 Sum_probs=33.7
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
+++++.+++ ++||+.. +|.|++++. +. ++.++ .+......+..+++|+|+ ..++|++-
T Consensus 3 ~g~~~~~~~--~~~v~~~~~~~v~~~d~-~~--~~~~~------------~~~~~~~~~~~~~~~s~d---g~~~~v~~ 61 (349)
T 1jmx_B 3 TGPALKAGH--EYMIVTNYPNNLHVVDV-AS--DTVYK------------SCVMPDKFGPGTAMMAPD---NRTAYVLN 61 (349)
T ss_dssp -CCCCCTTC--EEEEEEETTTEEEEEET-TT--TEEEE------------EEECSSCCSSCEEEECTT---SSEEEEEE
T ss_pred ccccccCCC--EEEEEeCCCCeEEEEEC-CC--CcEEE------------EEecCCCCCCceeEECCC---CCEEEEEe
Confidence 345667776 7888774 799999874 22 22221 111122235778999984 34577753
No 110
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=83.01 E-value=6.9 Score=42.29 Aligned_cols=56 Identities=9% Similarity=0.068 Sum_probs=35.9
Q ss_pred eEEEcCCCCceEEEEee-----CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEE
Q 005466 217 NMVAHPDGSNRAFFSNQ-----EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFA 291 (695)
Q Consensus 217 ~m~~~pDGs~RlfV~Eq-----~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yv 291 (695)
..++.|||. |+||++. .+.|++++. + +++.+ .++..+.. . +|+++|| ..++||
T Consensus 37 ~~~~~pd~~-~vyV~~~~~~~~~~~V~ViD~-~--t~~v~------------~~I~vG~~--P-~va~spD---G~~lyV 94 (386)
T 3sjl_D 37 LEAPAPDAR-RVYVNDPAHFAAVTQQFVIDG-E--AGRVI------------GMIDGGFL--P-NPVVADD---GSFIAH 94 (386)
T ss_dssp CCCCCCCTT-EEEEEECGGGCSSEEEEEEET-T--TTEEE------------EEEEECSS--C-EEEECTT---SSCEEE
T ss_pred eeccCCCCC-EEEEEcCcccCCCCEEEEEEC-C--CCeEE------------EEEECCCC--C-cEEECCC---CCEEEE
Confidence 345678985 9999997 589999863 2 23322 23433333 2 5999995 456998
Q ss_pred EEe
Q 005466 292 SFN 294 (695)
Q Consensus 292 sYs 294 (695)
.-+
T Consensus 95 an~ 97 (386)
T 3sjl_D 95 AST 97 (386)
T ss_dssp EEE
T ss_pred Ecc
Confidence 754
No 111
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=83.00 E-value=57 Score=35.41 Aligned_cols=69 Identities=14% Similarity=0.017 Sum_probs=44.2
Q ss_pred EEEEEecCceeeEEEcCCCCceEEEEe----------eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCC-----
Q 005466 206 CLEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDT----- 270 (695)
Q Consensus 206 ~le~va~Gl~~~m~~~pDGs~RlfV~E----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~----- 270 (695)
.+.+|..|..-+|+++|||. ++||++ +.+.|.+++. . +++.+ .++...+
T Consensus 111 vv~~I~vG~~Pgia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~-~--t~~vv------------~~I~v~g~~r~~ 174 (426)
T 3c75_H 111 ILGMTDGGFLPHPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDP-V--TFLPI------------ADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEECSSCEEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECT-T--TCCEE------------EEEEETTCCCCC
T ss_pred EEEEEECCCCCceEECCCCC-EEEEEeccccccccCCCCCEEEEEEC-C--CCcEE------------EEEECCCccccc
Confidence 35566666545899999996 899997 4677888753 2 22222 1222221
Q ss_pred -CCceeeeeeCCCCCCCCEEEEEE
Q 005466 271 -EFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 271 -E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..+..+++|+|| ..++||+-
T Consensus 175 ~g~~P~~~~~spD---Gk~lyV~n 195 (426)
T 3c75_H 175 VGTYQWMNALTPD---NKNLLFYQ 195 (426)
T ss_dssp BSCCGGGSEECTT---SSEEEEEE
T ss_pred cCCCcceEEEcCC---CCEEEEEe
Confidence 134678999985 45899974
No 112
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=82.65 E-value=15 Score=37.14 Aligned_cols=53 Identities=15% Similarity=0.279 Sum_probs=33.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++|+|||. .+..+..+|.|+++++.+......+ .+..........++|+|+
T Consensus 109 ~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~-------------~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 109 KSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECV-------------SVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEE-------------EEECCCCSCEEEEEECSS
T ss_pred eEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEE-------------EEecCcCCCeEEEEECCC
Confidence 7899999994 5666678999999876321110000 112223455788999984
No 113
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=82.61 E-value=12 Score=37.74 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=36.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|+|||. .++.+..+|.|+++++.. + +.+ ....+-......++|+|+ +.+.++-+
T Consensus 210 ~~l~~spd~~-~l~s~s~dg~i~iwd~~~-~--~~~-------------~~~~~h~~~v~~~~~sp~----~~~l~s~s 267 (321)
T 3ow8_A 210 RSLTFSPDSQ-LLVTASDDGYIKIYDVQH-A--NLA-------------GTLSGHASWVLNVAFCPD----DTHFVSSS 267 (321)
T ss_dssp CEEEECTTSC-EEEEECTTSCEEEEETTT-C--CEE-------------EEECCCSSCEEEEEECTT----SSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCeEEEEECCC-c--cee-------------EEEcCCCCceEEEEECCC----CCEEEEEe
Confidence 6899999994 566667899999987532 1 111 111233455789999984 54444433
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=82.19 E-value=29 Score=33.34 Aligned_cols=62 Identities=15% Similarity=0.207 Sum_probs=38.0
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..|+|+|||. .|+.+..+|.|+++++.. +... .+ + .............++|+|. .++.+.++
T Consensus 15 ~~~~~~~~~~-~l~~~~~dg~i~iw~~~~-~~~~-~~---------~-~~~~~~~~~~v~~~~~~~~--~d~~~l~s 76 (351)
T 3f3f_A 15 HDVVYDFYGR-HVATCSSDQHIKVFKLDK-DTSN-WE---------L-SDSWRAHDSSIVAIDWASP--EYGRIIAS 76 (351)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEEECS-SSCC-EE---------E-EEEEECCSSCEEEEEECCG--GGCSEEEE
T ss_pred eEEEEcCCCC-EEEEeeCCCeEEEEECCC-CCCc-ce---------e-cceeccCCCcEEEEEEcCC--CCCCEEEE
Confidence 6899999995 577777899999997632 2111 00 0 0112234567899999983 23444443
No 115
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=81.99 E-value=52 Score=36.65 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=13.9
Q ss_pred eeEEEcCCCCceEEEEeeCc
Q 005466 216 LNMVAHPDGSNRAFFSNQEG 235 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G 235 (695)
..++|+|||. +|+++..++
T Consensus 212 ~~~~~SpDg~-~l~~~~~d~ 230 (741)
T 2ecf_A 212 TGYWWAPDDS-AIAYARIDE 230 (741)
T ss_dssp CSEEECTTSS-CEEEEEEEC
T ss_pred cceEECCCCC-EEEEEEEcC
Confidence 5689999996 577765543
No 116
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=81.75 E-value=20 Score=36.06 Aligned_cols=58 Identities=21% Similarity=0.268 Sum_probs=36.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++++|||. .++.+..+|.|+++++.. + +.+ .....-+....+++|+| ++.++++-+
T Consensus 188 ~~~~~~~~~~-~l~sg~~d~~v~~wd~~~-~--~~~-------------~~~~~h~~~v~~v~~~p----~~~~l~s~s 245 (340)
T 1got_B 188 MSLSLAPDTR-LFVSGACDASAKLWDVRE-G--MCR-------------QTFTGHESDINAICFFP----NGNAFATGS 245 (340)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTT-C--SEE-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECCC-C--eeE-------------EEEcCCcCCEEEEEEcC----CCCEEEEEc
Confidence 7899999984 344555799999997532 2 211 11122345678999999 455555443
No 117
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=81.39 E-value=16 Score=37.63 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=21.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++++|||. .+..+..+|.|+++++
T Consensus 253 ~~v~~~p~~~-~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 253 NSVKFFPDGQ-RFGTGSDDGTCRLFDM 278 (380)
T ss_dssp CEEEECTTSS-EEEEECSSSCEEEEET
T ss_pred EEEEEecCCC-eEEEEcCCCeEEEEEC
Confidence 6899999994 5666668999999985
No 118
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=81.34 E-value=36 Score=31.93 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=20.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++++||| +.++....|.|+++++
T Consensus 45 ~~~~~spdg--~~l~~~~~~~i~~~d~ 69 (297)
T 2ojh_A 45 EAPNWSPDG--KYLLLNSEGLLYRLSL 69 (297)
T ss_dssp EEEEECTTS--SEEEEEETTEEEEEES
T ss_pred EeeEECCCC--CEEEEEcCCeEEEEeC
Confidence 789999999 4555566899999875
No 119
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=80.91 E-value=17 Score=36.63 Aligned_cols=56 Identities=18% Similarity=0.347 Sum_probs=35.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..+++.|||. .+.....+|.|+++++. +++.+. ....-......++|+|+ +.+.++
T Consensus 168 ~~~~~spdg~-~lasg~~dg~i~iwd~~---~~~~~~-------------~~~~h~~~v~~l~~spd----~~~l~s 223 (321)
T 3ow8_A 168 LSIAYSPDGK-YLASGAIDGIINIFDIA---TGKLLH-------------TLEGHAMPIRSLTFSPD----SQLLVT 223 (321)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT---TTEEEE-------------EECCCSSCCCEEEECTT----SCEEEE
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECC---CCcEEE-------------EEcccCCceeEEEEcCC----CCEEEE
Confidence 7899999995 56666789999998752 222221 11123345788999984 544443
No 120
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=79.94 E-value=24 Score=34.91 Aligned_cols=50 Identities=14% Similarity=0.046 Sum_probs=33.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++|+|||. .++.+..+|.|+++++. . ++.++ .....+.....++|+|+
T Consensus 17 ~~~~fsp~~~-~l~s~~~dg~v~lWd~~-~--~~~~~-------------~~~~~~~~v~~~~~~~~ 66 (304)
T 2ynn_A 17 KGIDFHPTEP-WVLTTLYSGRVELWNYE-T--QVEVR-------------SIQVTETPVRAGKFIAR 66 (304)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETT-T--TEEEE-------------EEECCSSCEEEEEEEGG
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECC-C--CceeE-------------EeeccCCcEEEEEEeCC
Confidence 7899999995 57777789999999752 2 22211 11233455778888874
No 121
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=79.47 E-value=22 Score=36.53 Aligned_cols=61 Identities=10% Similarity=0.068 Sum_probs=38.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|.||+ +++++..+|.|+++++.. +. .+.. + .....+-+.....++|+| +|.+.++-+
T Consensus 86 ~~~~~s~d~--~l~~~s~dg~v~lWd~~~-~~--~~~~--------~-~~~~~~H~~~V~~v~~sp----dg~~l~sgs 146 (344)
T 4gqb_B 86 ADLTWVGER--GILVASDSGAVELWELDE-NE--TLIV--------S-KFCKYEHDDIVSTVSVLS----SGTQAVSGS 146 (344)
T ss_dssp EEEEEETTT--EEEEEETTSEEEEEEECT-TS--SCEE--------E-EEEEECCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEeCCC--eEEEEECCCEEEEEeccC-CC--ceeE--------e-eccccCCCCCEEEEEECC----CCCEEEEEe
Confidence 678999997 899999999999998632 21 1110 0 111223345688999998 455555433
No 122
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=79.19 E-value=44 Score=33.27 Aligned_cols=49 Identities=24% Similarity=0.430 Sum_probs=32.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|||. .+..+..+|.|+++++. +++.+. . ...+.....++|+|+
T Consensus 200 ~~~~~sp~g~-~l~s~~~dg~i~iwd~~---~~~~~~------------~--~~~~~~v~~~~~sp~ 248 (319)
T 3frx_A 200 NTLTASPDGT-LIASAGKDGEIMLWNLA---AKKAMY------------T--LSAQDEVFSLAFSPN 248 (319)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEETT---TTEEEE------------E--EECCSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECC---CCcEEE------------E--ecCCCcEEEEEEcCC
Confidence 7899999994 45566689999999752 222221 0 112345789999994
No 123
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=78.43 E-value=30 Score=36.18 Aligned_cols=63 Identities=10% Similarity=0.002 Sum_probs=38.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++++|++.+.++....+|.|+++++...... .+. ........+...|+|+|+ ..+++++-+
T Consensus 235 ~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~--------~~~-----~~~~~~~~~v~~i~~~p~---~~~~l~tg~ 297 (430)
T 2xyi_A 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS--------KPS-----HTVDAHTAEVNCLSFNPY---SEFILATGS 297 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCSCSS--------SCS-----EEEECCSSCEEEEEECSS---CTTEEEEEE
T ss_pred eeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC--------cce-----eEeecCCCCeEEEEeCCC---CCCEEEEEe
Confidence 678999966544555667999999985321100 111 111234567899999984 334666544
No 124
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=78.42 E-value=28 Score=37.19 Aligned_cols=49 Identities=18% Similarity=0.315 Sum_probs=32.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|+++|||. .|..+..+|.|++++. ++ +.++ ....-......++|+|+
T Consensus 471 ~~~~~spd~~-~las~~~d~~i~iw~~--~~--~~~~-------------~~~~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 471 RGVAFSPDGQ-TIASASDDKTVKLWNR--NG--QLLQ-------------TLTGHSSSVRGVAFSPD 519 (577)
T ss_dssp EEEEECTTSC-EEEEEETTSEEEEEET--TS--CEEE-------------EEECCSSCEEEEEECTT
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEcC--CC--CEEE-------------EEeCCCCCEEEEEEcCC
Confidence 6799999994 4555667899999863 22 2221 11223456789999984
No 125
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=78.27 E-value=51 Score=33.02 Aligned_cols=26 Identities=23% Similarity=0.226 Sum_probs=21.6
Q ss_pred eeEEEcCCCCceEEEEeeC---ceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQE---GKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~---G~V~~~~~ 242 (695)
..|++.|||. .++++..+ |.|+++++
T Consensus 237 ~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 237 RSVKFSPQGS-LLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp EEEEECSSTT-EEEEEEEETTEEEEEEEET
T ss_pred ceEEECCCCC-EEEEEecCCCCceEEEEEC
Confidence 7899999985 57777778 99999985
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=78.24 E-value=29 Score=35.34 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=37.1
Q ss_pred eeEEEcCCCCceEEEEeeCce-EEEEEccCCCCCceeeecCCCCCcCCcCceeeC-CCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGK-IWLATIPEQGLGETMELDASSPFADLTDEVHFD-TEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~-V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~-~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..++++|||. .+..+..+|. |+++++. . ++.+. .+..+ .......++|+|+ |.+.++-
T Consensus 199 ~~~~~s~~g~-~l~s~s~d~~~v~iwd~~-~--~~~~~------------~~~~g~h~~~v~~~~~s~~----~~~l~s~ 258 (355)
T 3vu4_A 199 KMVRLNRKSD-MVATCSQDGTIIRVFKTE-D--GVLVR------------EFRRGLDRADVVDMKWSTD----GSKLAVV 258 (355)
T ss_dssp EEEEECTTSS-EEEEEETTCSEEEEEETT-T--CCEEE------------EEECTTCCSCEEEEEECTT----SCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCCEEEEEECC-C--CcEEE------------EEEcCCCCCcEEEEEECCC----CCEEEEE
Confidence 7899999994 4666667997 9998753 2 22221 11111 3456889999994 5555544
Q ss_pred e
Q 005466 294 N 294 (695)
Q Consensus 294 s 294 (695)
+
T Consensus 259 s 259 (355)
T 3vu4_A 259 S 259 (355)
T ss_dssp E
T ss_pred E
Confidence 3
No 127
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=78.18 E-value=38 Score=33.97 Aligned_cols=58 Identities=14% Similarity=0.287 Sum_probs=36.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..++++|||. .++.+..+|.|+++++.. ++.+.. +. ......+...++|+| +|.+.++
T Consensus 230 ~~v~~~p~~~-~l~s~s~d~~v~iwd~~~---~~~~~~--------~~---~~~~~~~v~~~~~s~----~g~~l~~ 287 (340)
T 1got_B 230 NAICFFPNGN-AFATGSDDATCRLFDLRA---DQELMT--------YS---HDNIICGITSVSFSK----SGRLLLA 287 (340)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTT---TEEEEE--------EC---CTTCCSCEEEEEECT----TSSEEEE
T ss_pred EEEEEcCCCC-EEEEEcCCCcEEEEECCC---CcEEEE--------Ec---cCCcccceEEEEECC----CCCEEEE
Confidence 7899999995 566777899999997532 222110 00 001224688999998 4555544
No 128
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=78.00 E-value=8 Score=41.23 Aligned_cols=92 Identities=18% Similarity=0.140 Sum_probs=48.8
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCC-CCCCCCCCCeE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNP-FSEDSGLQPEI 453 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNP-F~~~~~~~pEI 453 (695)
.|...| +|.+|+++|.-...- ...++ ...|+|+|+|.+... .. ...+.-.|. |
T Consensus 54 Di~~~~-~G~~~~s~~~~~pg~----~~~~~-~~~G~I~~~d~~~~~-~~---------~~~l~~~g~~~---------- 107 (355)
T 3sre_A 54 DLEILP-NGLAFISSGLKYPGI----MSFDP-DKSGKILLMDLNEKE-PA---------VSELEIIGNTL---------- 107 (355)
T ss_dssp EEEECT-TSEEEEEECCC----------------CCEEEEEETTSSS-CC---------EEECEEECSSC----------
T ss_pred eeEEcC-CCeEEEEeccccCCC----cccCC-CCCCeEEEEecCCCC-Cc---------eEEEEccCCCC----------
Confidence 577788 999999998532211 11112 468999999987510 00 001110110 1
Q ss_pred EEeccccceeeeecCC-CC-CeEEEEEccCC-CceeEEEeecC
Q 005466 454 WALGLRNPWRCSFDSD-RP-SYFMCADVGQD-VYEEVDIITRG 493 (695)
Q Consensus 454 ~A~GlRNP~r~sfD~~-~g-~~l~~~DvG~d-~~EEIn~I~kG 493 (695)
.-+-=||.|+++.+. ++ .+||+.+|+.. ..-||-.+..+
T Consensus 108 -~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~ 149 (355)
T 3sre_A 108 -DISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEE 149 (355)
T ss_dssp -CGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETT
T ss_pred -CcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECC
Confidence 111238999999663 22 27999999853 33455445543
No 129
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=77.95 E-value=48 Score=36.44 Aligned_cols=26 Identities=19% Similarity=0.266 Sum_probs=18.8
Q ss_pred eeEEEcCCCCceEEEEeeC--------ceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQE--------GKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~--------G~V~~~~~ 242 (695)
..++++|||. +|+++... ..||++++
T Consensus 191 ~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 191 TGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARV 224 (662)
T ss_dssp CCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEE
T ss_pred cCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEE
Confidence 6788999996 56555533 47998875
No 130
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=77.73 E-value=48 Score=33.97 Aligned_cols=73 Identities=11% Similarity=0.133 Sum_probs=40.3
Q ss_pred CcEEEEEecCce-eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 204 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
+-++.++...-. ..++|+||| +++++--.+.+.++... .+ +.+. . .+.......+..++|+|
T Consensus 167 ~~~~~~~~~~~~V~~v~fspdg--~~l~s~s~~~~~~~~~~-~~--~~~~---~--------~~~~~~~~~v~~v~fsp- 229 (365)
T 4h5i_A 167 LTEKFEIETRGEVKDLHFSTDG--KVVAYITGSSLEVISTV-TG--SCIA---R--------KTDFDKNWSLSKINFIA- 229 (365)
T ss_dssp TEEEEEEECSSCCCEEEECTTS--SEEEEECSSCEEEEETT-TC--CEEE---E--------ECCCCTTEEEEEEEEEE-
T ss_pred CcEEEEeCCCCceEEEEEccCC--ceEEeccceeEEEEEec-cC--ccee---e--------eecCCCCCCEEEEEEcC-
Confidence 444455543333 789999999 56666556666666532 22 2110 0 01111223467899998
Q ss_pred CCCCCEEEEEEeec
Q 005466 283 FAKNGRFFASFNCD 296 (695)
Q Consensus 283 F~~Ng~~YvsYs~~ 296 (695)
++.+.++-+.+
T Consensus 230 ---dg~~l~~~s~d 240 (365)
T 4h5i_A 230 ---DDTVLIAASLK 240 (365)
T ss_dssp ---TTEEEEEEEES
T ss_pred ---CCCEEEEEecC
Confidence 57777766644
No 131
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=77.67 E-value=61 Score=35.94 Aligned_cols=16 Identities=25% Similarity=0.223 Sum_probs=11.9
Q ss_pred eeEEEcCCCCceEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSN 232 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E 232 (695)
..++|+|||. +|+++.
T Consensus 184 ~~~~~SpDg~-~la~~~ 199 (706)
T 2z3z_A 184 KGTFWSPKGS-CLAFYR 199 (706)
T ss_dssp CSEEECTTSS-EEEEEE
T ss_pred ceEEECCCCC-EEEEEE
Confidence 5789999995 565554
No 132
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=77.56 E-value=46 Score=33.50 Aligned_cols=60 Identities=15% Similarity=0.117 Sum_probs=36.8
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|+|||. .|+.+..+|.|+++++. .+..+.+ ....+-+.....++|+|+ +.+.++-+
T Consensus 65 ~~~~~sp~g~-~l~s~s~D~~v~iw~~~-~~~~~~~-------------~~~~~h~~~v~~v~~sp~----~~~l~s~s 124 (345)
T 3fm0_A 65 RKVAWSPCGN-YLASASFDATTCIWKKN-QDDFECV-------------TTLEGHENEVKSVAWAPS----GNLLATCS 124 (345)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEEC-CC-EEEE-------------EEECCCSSCEEEEEECTT----SSEEEEEE
T ss_pred EEEEECCCCC-EEEEEECCCcEEEEEcc-CCCeEEE-------------EEccCCCCCceEEEEeCC----CCEEEEEE
Confidence 6789999995 56777789999888642 2211111 111233456789999994 55555433
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=76.77 E-value=56 Score=31.57 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=20.9
Q ss_pred eeEEEcCCCCceEEEEee-CceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G~V~~~~~ 242 (695)
..|++.|||. ++|++.. .+.|+++++
T Consensus 37 ~~~~~s~dg~-~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 37 MVPMVAPGGR-IAYATVNKSESLVKIDL 63 (337)
T ss_dssp CCEEECTTSS-EEEEEETTTTEEEEEET
T ss_pred cceEEcCCCC-EEEEEeCCCCeEEEEEC
Confidence 6789999995 5777765 689999874
No 134
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=76.38 E-value=46 Score=33.76 Aligned_cols=27 Identities=7% Similarity=0.137 Sum_probs=22.8
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|+++|||...++.+..+|.|+++++
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 789999999656777778999999985
No 135
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=76.09 E-value=35 Score=32.70 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..+++.|+| ++++...+|.|+++++.. ++.+. ...........++|+|+
T Consensus 188 ~~~~~~~~~--~~~~~~~dg~i~i~d~~~---~~~~~-------------~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 188 RHLAVVDDG--HFISCSNDGLIKLVDMHT---GDVLR-------------TYEGHESFVYCIKLLPN 236 (313)
T ss_dssp EEEEEEETT--EEEEEETTSEEEEEETTT---CCEEE-------------EEECCSSCEEEEEECTT
T ss_pred EEEEEcCCC--eEEEccCCCeEEEEECCc---hhhhh-------------hhhcCCceEEEEEEecC
Confidence 678899999 588888999999997532 22221 11233456889999984
No 136
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=75.96 E-value=22 Score=36.56 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=37.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|+|||. +|+.+..+|.|+++++. . ++.+. ...+-......++|+|+ +..++++-+
T Consensus 131 ~~v~~spdg~-~l~sgs~d~~i~iwd~~-~--~~~~~-------------~~~~h~~~V~~~~~~~~---~~~~l~s~s 189 (344)
T 4gqb_B 131 STVSVLSSGT-QAVSGSKDICIKVWDLA-Q--QVVLS-------------SYRAHAAQVTCVAASPH---KDSVFLSCS 189 (344)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-T--TEEEE-------------EECCCSSCEEEEEECSS---CTTEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECC-C--CcEEE-------------EEcCcCCceEEEEecCC---CCCceeeec
Confidence 7899999995 56667789999999752 2 22221 11223455788999984 234556544
No 137
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=75.89 E-value=73 Score=32.44 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=35.5
Q ss_pred eeEEEcC-CCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHP-DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~p-DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|+++| |+ +.++.+..+|.|+++++++.+.... ...+. .....-......++|||+
T Consensus 85 ~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~----~~~~~-----~~~~~h~~~v~~~~~~p~ 142 (402)
T 2aq5_A 85 LDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLP----LREPV-----ITLEGHTKRVGIVAWHPT 142 (402)
T ss_dssp EEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSC----BCSCS-----EEEECCSSCEEEEEECSS
T ss_pred EEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccc----cCCce-----EEecCCCCeEEEEEECcC
Confidence 6889999 66 3677777899999998643211000 00111 122344567899999985
No 138
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=75.65 E-value=33 Score=33.93 Aligned_cols=51 Identities=6% Similarity=0.011 Sum_probs=32.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 281 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhP 281 (695)
..|+++|||. .++++..+|.|+++++.. +..+.+ ............++|+|
T Consensus 12 ~~~~~s~~~~-~l~~~~~d~~v~i~~~~~-~~~~~~-------------~~~~~h~~~v~~~~~~~ 62 (372)
T 1k8k_C 12 SCHAWNKDRT-QIAICPNNHEVHIYEKSG-NKWVQV-------------HELKEHNGQVTGVDWAP 62 (372)
T ss_dssp CEEEECTTSS-EEEEECSSSEEEEEEEET-TEEEEE-------------EEEECCSSCEEEEEEET
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeCCC-CcEEee-------------eeecCCCCcccEEEEeC
Confidence 6889999994 566666899999987532 210011 11223455788999998
No 139
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=75.12 E-value=61 Score=31.20 Aligned_cols=54 Identities=15% Similarity=0.240 Sum_probs=32.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|+++||| +++++-.+|.|+++++..... ..++..+ .....+.....++|+|+
T Consensus 55 ~~~~~~~~~--~~l~~~~dg~i~iw~~~~~~~--------~~~~~~~---~~~~~~~~v~~~~~~~~ 108 (337)
T 1gxr_A 55 CAVTISNPT--RHVYTGGKGCVKVWDISHPGN--------KSPVSQL---DCLNRDNYIRSCKLLPD 108 (337)
T ss_dssp CEEEECSSS--SEEEEECBSEEEEEETTSTTC--------CSCSEEE---ECSCTTSBEEEEEECTT
T ss_pred EEEEEecCC--cEEEEcCCCeEEEEECCCCCc--------eeeeecc---cccCCCCcEEEEEEcCC
Confidence 789999999 455554599999998632111 1111111 01134566889999984
No 140
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=74.49 E-value=33 Score=35.26 Aligned_cols=63 Identities=10% Similarity=0.062 Sum_probs=43.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|+++|||. .++++..+|.|+++++.. ++.+. ............++++|.|..++.+.++-+
T Consensus 218 ~~~~~s~~~~-~l~s~~~dg~i~iwd~~~---~~~~~------------~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 218 SSICIDEECC-VLILGTTRGIIDIWDIRF---NVLIR------------SWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEETTT---TEEEE------------EEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEEcCC---ccEEE------------EEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 7899999984 577778899999997532 22221 111134456889999999999887766543
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=74.46 E-value=23 Score=39.35 Aligned_cols=25 Identities=16% Similarity=0.207 Sum_probs=19.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++|+||| +++++..+|.|+++++
T Consensus 20 ~~~~~spdg--~~~~~~~dg~i~~~d~ 44 (723)
T 1xfd_A 20 PEAKWISDT--EFIYREQKGTVRLWNV 44 (723)
T ss_dssp CCCCBSSSS--CBCCCCSSSCEEEBCG
T ss_pred cccEEcCCC--cEEEEeCCCCEEEEEC
Confidence 567899999 4555678899999864
No 142
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=74.36 E-value=62 Score=30.93 Aligned_cols=72 Identities=10% Similarity=0.063 Sum_probs=39.6
Q ss_pred eeEEEcCC--CCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEE
Q 005466 216 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFA 291 (695)
Q Consensus 216 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yv 291 (695)
..|+++|+ |. .++.+..+|.|+++++........+.+......+.+ ...........++++|+.....++.+
T Consensus 114 ~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 114 YSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI---PPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp EEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC---CCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred eEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccccccc---ccCCcccceeEEEeccCCCCCcEEEE
Confidence 78999999 74 577777899999998633111111110000000000 01134567789999997544444444
No 143
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=74.13 E-value=30 Score=36.18 Aligned_cols=60 Identities=20% Similarity=0.269 Sum_probs=36.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..|+|+|...+-|.+...+|.|+++++. .+.... ++. ..+-.....+|+|+|. ++.+.++
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~-~~~~~~--------~~~-----~~gH~~~V~~l~f~p~---~~~~l~s 182 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFG-IKDKPT--------FIK-----GIGAGGSITGLKFNPL---NTNQFYA 182 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSS-CCSCCE--------EEC-----CCSSSCCCCEEEECSS---CTTEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECC-CCCcee--------EEE-----ccCCCCCEEEEEEeCC---CCCEEEE
Confidence 6899999665456667789999998752 222111 011 1122456789999983 4544444
No 144
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=74.00 E-value=53 Score=36.13 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=18.8
Q ss_pred eeEEEcCCCCceEEEEeeC----------ceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQE----------GKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~----------G~V~~~~~ 242 (695)
..++|+|||. +|+++..+ ..||++++
T Consensus 133 ~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 133 ADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp EEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred cCcEECCCCC-EEEEEEecccCCCCCCceeEEEEEEC
Confidence 6789999996 56655543 57888764
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=73.20 E-value=69 Score=30.92 Aligned_cols=15 Identities=20% Similarity=0.228 Sum_probs=12.1
Q ss_pred cceEEcCCCC-eEEEEe
Q 005466 374 GQLLFGPTDG-YMYFMM 389 (695)
Q Consensus 374 G~L~FGP~DG-~LYi~~ 389 (695)
..+.|.| || +||++.
T Consensus 85 ~~~~~s~-dg~~l~~~~ 100 (337)
T 1pby_B 85 FGAALSP-DGKTLAIYE 100 (337)
T ss_dssp TCEEECT-TSSEEEEEE
T ss_pred cceEECC-CCCEEEEEe
Confidence 4699999 88 788875
No 146
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=73.17 E-value=1.2e+02 Score=33.82 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=27.0
Q ss_pred EEEEEecCce-eeEEEc----CCCCceEEEEee-CceEEEEE
Q 005466 206 CLEKIGNGSY-LNMVAH----PDGSNRAFFSNQ-EGKIWLAT 241 (695)
Q Consensus 206 ~le~va~Gl~-~~m~~~----pDGs~RlfV~Eq-~G~V~~~~ 241 (695)
.+.+|..|.. ..|+++ |||. ++||+.. .+.|.+++
T Consensus 232 ~v~~i~~G~~P~~ia~s~~~~pDGk-~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 232 TVAEIKIGSEARSIETSKMEGWEDK-YAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTT-EEEEEEEETTEEEEEE
T ss_pred EeEEEecCCCCceeEEccccCCCCC-EEEEEEccCCeEEEEE
Confidence 4566666777 899999 6996 7888775 58888876
No 147
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=73.15 E-value=68 Score=30.86 Aligned_cols=49 Identities=8% Similarity=0.089 Sum_probs=33.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|||. .++++..+|.|+++++.. + +.. .....+.....++|+|+
T Consensus 228 ~~~~~s~~~~-~l~~~~~~~~i~~~~~~~-~--~~~--------------~~~~~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 228 FSLGYCPTGE-WLAVGMESSNVEVLHVNK-P--DKY--------------QLHLHESCVLSLKFAYC 276 (337)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTS-S--CEE--------------EECCCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECCC-C--CeE--------------EEcCCccceeEEEECCC
Confidence 7899999995 677777899999987532 1 111 11233456889999984
No 148
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=73.06 E-value=77 Score=31.43 Aligned_cols=55 Identities=11% Similarity=0.118 Sum_probs=35.2
Q ss_pred ceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeEE
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 454 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI~ 454 (695)
.+.+.+ ||.++++..+ .|+|.-+|++|+ ++|
T Consensus 129 ~v~~~~-~G~~lv~~~~-----------------~~~v~~~d~~G~-------------------------------~~w 159 (276)
T 3no2_A 129 QINKNK-KGNYLVPLFA-----------------TSEVREIAPNGQ-------------------------------LLN 159 (276)
T ss_dssp CCEECT-TSCEEEEETT-----------------TTEEEEECTTSC-------------------------------EEE
T ss_pred CceECC-CCCEEEEecC-----------------CCEEEEECCCCC-------------------------------EEE
Confidence 466778 8887775432 366888887762 577
Q ss_pred Eeccc-cceeeeecCCCCCeEEEEEcc
Q 005466 455 ALGLR-NPWRCSFDSDRPSYFMCADVG 480 (695)
Q Consensus 455 A~GlR-NP~r~sfD~~~g~~l~~~DvG 480 (695)
.++.. .|+...+++.. .+++++.+
T Consensus 160 ~~~~~~~~~~~~~~~~g--~~~v~~~~ 184 (276)
T 3no2_A 160 SVKLSGTPFSSAFLDNG--DCLVACGD 184 (276)
T ss_dssp EEECSSCCCEEEECTTS--CEEEECBT
T ss_pred EEECCCCccceeEcCCC--CEEEEeCC
Confidence 77764 46677776653 36666544
No 149
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=73.03 E-value=53 Score=32.81 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..++|+|||. .+..+..+|.|+++++.+ ...... . ... ..+..+-+....+++|+|+ |.+.++-
T Consensus 62 ~~v~~sp~~~-~las~s~D~~v~iw~~~~-~~~~~~----~---~~~-~~~~~~h~~~V~~v~~sp~----g~~las~ 125 (330)
T 2hes_X 62 RSVAWRPHTS-LLAAGSFDSTVSIWAKEE-SADRTF----E---MDL-LAIIEGHENEVKGVAWSND----GYYLATC 125 (330)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEC--------C----C---CEE-EEEEC----CEEEEEECTT----SCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEEccc-CcCccc----c---cee-EEEEcCCCCcEEEEEECCC----CCEEEEE
Confidence 6899999994 566667899999987521 110000 0 000 0112233456889999994 5554443
No 150
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=73.03 E-value=9.7 Score=41.94 Aligned_cols=73 Identities=14% Similarity=0.044 Sum_probs=49.9
Q ss_pred eeEEEcCCCCceEEEEee------------------CceEEEEEccCCCC--CceeeecCCCCCcCC---cCceeeCCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQ------------------EGKIWLATIPEQGL--GETMELDASSPFADL---TDEVHFDTEF 272 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq------------------~G~V~~~~~p~~gs--g~~l~~~~~~pflDl---~~~V~~~~E~ 272 (695)
-.|+|.||| .|||+-- .|+|+.++ |+ |+ +....+....||.+- ..+|++.+-|
T Consensus 142 ~~l~fgpDG--~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~-~d-g~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R 217 (463)
T 2wg3_C 142 GQLLFGPDG--FLYIILGDGMITLDDMEEMDGLSDFTGSVLRLD-VD-TDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH 217 (463)
T ss_dssp EEEEECTTS--CEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEB-CC-CCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS
T ss_pred CcEeECCCC--cEEEEeCCCCCCCCccccccCcCCCCeeEEEEE-CC-CCcccccCcCCCCCCCcCCCCCcccEEEECCC
Confidence 679999999 7999831 48898886 43 32 111223356788764 4689999999
Q ss_pred ceeeeeeCCCCC-CCCEEEEE
Q 005466 273 GLMGMAFHPNFA-KNGRFFAS 292 (695)
Q Consensus 273 GLLGiAfhPdF~-~Ng~~Yvs 292 (695)
-..||||||+=. -||.++++
T Consensus 218 Np~gla~dp~tg~~~G~l~~~ 238 (463)
T 2wg3_C 218 DPGRCAVDRHPTDININLTIL 238 (463)
T ss_dssp SCCBEEEESSCSSTTCSEEEE
T ss_pred CcceEEECCCCCCcccceEEE
Confidence 999999999532 14645444
No 151
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=72.86 E-value=29 Score=35.80 Aligned_cols=58 Identities=16% Similarity=0.355 Sum_probs=38.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|.|||. +++.+..+|.|+++++. . ++.+ .....+.+...++++|. ++.+.++-+
T Consensus 169 ~~~~~~p~~~-~l~s~s~d~~v~iwd~~-~--~~~~--------------~~~~~~~~v~~~~~~~~---~~~~l~~~s 226 (393)
T 1erj_A 169 YSLDYFPSGD-KLVSGSGDRTVRIWDLR-T--GQCS--------------LTLSIEDGVTTVAVSPG---DGKYIAAGS 226 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETT-T--TEEE--------------EEEECSSCEEEEEECST---TCCEEEEEE
T ss_pred EEEEEcCCCC-EEEEecCCCcEEEEECC-C--CeeE--------------EEEEcCCCcEEEEEECC---CCCEEEEEc
Confidence 7899999995 67777789999999752 2 2211 11123456888999983 565555443
No 152
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=72.66 E-value=97 Score=32.38 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=18.4
Q ss_pred eeEEEcCCCCceEE-EEeeCc--eEEEEEc
Q 005466 216 LNMVAHPDGSNRAF-FSNQEG--KIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~Rlf-V~Eq~G--~V~~~~~ 242 (695)
..++|+|||. +|+ ...++| .||++++
T Consensus 226 ~~~~~spdg~-~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 226 GAPAFSPDGS-KLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp EEEEECTTSS-EEEEEECTTSSCEEEEEET
T ss_pred cCEEEcCCCC-EEEEEEecCCCceEEEEEC
Confidence 7899999995 455 444554 4888874
No 153
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=71.94 E-value=25 Score=35.22 Aligned_cols=57 Identities=11% Similarity=0.192 Sum_probs=34.4
Q ss_pred eeEEEcC--CCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHP--DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~p--DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..|+++| +|. .+..+..+|.|+++++. .+ +.+.+ ...........++||| +|.+.++
T Consensus 129 ~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~-~~--~~~~~------------~~~~~~~~i~~~~~~p----dg~~las 187 (343)
T 3lrv_A 129 IYMYGHNEVNTE-YFIWADNRGTIGFQSYE-DD--SQYIV------------HSAKSDVEYSSGVLHK----DSLLLAL 187 (343)
T ss_dssp EEEECCC---CC-EEEEEETTCCEEEEESS-SS--CEEEE------------ECCCSSCCCCEEEECT----TSCEEEE
T ss_pred EEEEcCCCCCCC-EEEEEeCCCcEEEEECC-CC--cEEEE------------EecCCCCceEEEEECC----CCCEEEE
Confidence 7889999 883 34447789999999753 22 22110 0112234588999999 4555554
No 154
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=71.92 E-value=31 Score=38.07 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=39.0
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|+||+..++..+..+|.|++++.+. ++.+ ....+-+.....++|+|+ |.+.++-+
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~---~~~~-------------~~l~~H~~~V~~v~fspd----g~~las~s 209 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPP---FKFK-------------STFGEHTKFVHSVRYNPD----GSLFASTG 209 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTT---BEEE-------------EEECCCSSCEEEEEECTT----SSEEEEEE
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCC---CeEe-------------eeeccccCceEEEEECCC----CCEEEEEE
Confidence 67899999965677778899999987421 1111 112233456789999994 66666544
No 155
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=71.62 E-value=7.6 Score=44.37 Aligned_cols=96 Identities=20% Similarity=0.284 Sum_probs=53.5
Q ss_pred ceEEcCCCCeEEEEecCCCCCC---CccCccccC--CCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCC
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTA---DPYNFSQNK--KSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGL 449 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~---DP~~~aQn~--ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~ 449 (695)
.|.+.|.+|.+|+++=.....+ .| ..+.|+ ....|.|+|++.++.. .......|..|-+ .++|-..+.
T Consensus 388 di~v~p~~g~vY~alTnn~~rg~~~~~-~~~~Npr~~n~~G~I~r~~e~~~d---~~a~~f~W~i~l~-~G~p~~~~~-- 460 (592)
T 4a9v_A 388 WIVVSPKDGQVYCTLTNNAKRGEDGQP-VGGPNPREKNVYGQILRWRTDRDD---HASKTFAWDLFVV-AGNPSVHAG-- 460 (592)
T ss_dssp EEEECTTTCCEEEEECCBTTTTSTTSC-CBTTBCCSSBSSCEEEEEEEGGGC---TTCSEEEEEEEEE-CCCTTTSTT--
T ss_pred ceeEcCCCCEEEEEEeCCCCCCCcCcc-ccCCCCccCCCCCeEEEEeeCCCC---cccceeeEEEEEE-ccCCccccc--
Confidence 4778887899999974433221 12 123333 3578999999986521 1112333444433 223311110
Q ss_pred CCeEEE--------eccccceeeeecCCCCCeEEE-EEccC
Q 005466 450 QPEIWA--------LGLRNPWRCSFDSDRPSYFMC-ADVGQ 481 (695)
Q Consensus 450 ~pEI~A--------~GlRNP~r~sfD~~~g~~l~~-~DvG~ 481 (695)
..|+ -.|.+|-.++||+. | .||+ +|-+.
T Consensus 461 --~~~~g~~~~~~~~~fnsPDnL~fd~~-G-~LWf~TD~~~ 497 (592)
T 4a9v_A 461 --TPKGGSSNITPQNMFNSPDGLGFDKA-G-RLWILTDGDS 497 (592)
T ss_dssp --SGGGCCTTCCTTTCCCCEEEEEECTT-C-CEEEEECCCC
T ss_pred --ccccCccCccccCccCCCCceEECCC-C-CEEEEeCCCc
Confidence 0011 14789999999997 4 4888 78543
No 156
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=71.05 E-value=94 Score=31.58 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=34.5
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCcee-eCCCCceeeeeeCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVH-FDTEFGLMGMAFHP 281 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~-~~~E~GLLGiAfhP 281 (695)
..|+++|||.+.++.+..+|.|+++++. . ++.+. .+. .........++|+|
T Consensus 135 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~--~~~~~------------~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 135 GIVAWHPTAQNVLLSAGCDNVILVWDVG-T--GAAVL------------TLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp EEEEECSSBTTEEEEEETTSCEEEEETT-T--TEEEE------------EECTTTCCSCEEEEEECT
T ss_pred EEEEECcCCCCEEEEEcCCCEEEEEECC-C--CCccE------------EEecCCCCCceEEEEECC
Confidence 7899999986567777889999999753 2 22211 010 12345678999998
No 157
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.99 E-value=1.2e+02 Score=34.56 Aligned_cols=71 Identities=14% Similarity=0.134 Sum_probs=43.3
Q ss_pred ceEEcCCCCeEEEEe-cCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeE
Q 005466 375 QLLFGPTDGYMYFMM-GDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 453 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~-GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI 453 (695)
.|.|.+ +|.|||.+ +..+.. ..-.......|+|++++.. .-..
T Consensus 480 nL~fd~-~G~LWf~TD~~~~~~------g~~~~~gnn~v~~~dp~tG-----------------------------el~~ 523 (592)
T 4a9v_A 480 GLGFDK-AGRLWILTDGDSSNA------GDFAGMGNNQMLCADPATG-----------------------------EIRR 523 (592)
T ss_dssp EEEECT-TCCEEEEECCCCCCS------GGGTTCCSCEEEEECTTTC-----------------------------CEEE
T ss_pred ceEECC-CCCEEEEeCCCcCcc------ccccccCCceEEEEeCCCC-----------------------------eEEE
Confidence 599999 99999966 221110 1111122347999987541 1234
Q ss_pred EEeccc--cceeeeecCCCCCeEEEEEccCC
Q 005466 454 WALGLR--NPWRCSFDSDRPSYFMCADVGQD 482 (695)
Q Consensus 454 ~A~GlR--NP~r~sfD~~~g~~l~~~DvG~d 482 (695)
++.|.. -|-|++|.|+. .+||++-.-+.
T Consensus 524 fl~~P~~aEpnGiafSPD~-ktLfV~vQHPG 553 (592)
T 4a9v_A 524 FMVGPIGCEVTGISFSPDQ-KTLFVGIQHPG 553 (592)
T ss_dssp EEECCTTCEEEEEEECTTS-SEEEEEEESTT
T ss_pred EEeCCCCccccCCEECCCC-CEEEEEEeCCC
Confidence 554432 36899999874 58999876554
No 158
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=70.85 E-value=37 Score=34.27 Aligned_cols=61 Identities=11% Similarity=0.179 Sum_probs=38.5
Q ss_pred eeEEEcCCCCceEEEEeeCc---eEEEEEccCCCCCceeeecCCCCCcCCcCceee-CCCCceeeeeeCCCCCCCCEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEG---KIWLATIPEQGLGETMELDASSPFADLTDEVHF-DTEFGLMGMAFHPNFAKNGRFFA 291 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G---~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~-~~E~GLLGiAfhPdF~~Ng~~Yv 291 (695)
..|+++|||...+++...+| .|+++++.. +. +.+ .... ..+.....++|+|+ ++.+++
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~-~~-~~~-------------~~~~~~~~~~v~~~~~s~~---~~~~l~ 279 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRN-AN-TPL-------------QTLNQGHQKGILSLDWCHQ---DEHLLL 279 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTS-TT-SCS-------------BCCCSCCSSCEEEEEECSS---CSSCEE
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCC-CC-CCc-------------EEeecCccCceeEEEeCCC---CCCeEE
Confidence 78999999865677777787 999987532 11 111 0111 23567899999983 455555
Q ss_pred EEe
Q 005466 292 SFN 294 (695)
Q Consensus 292 sYs 294 (695)
+-+
T Consensus 280 s~~ 282 (416)
T 2pm9_A 280 SSG 282 (416)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 159
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=70.72 E-value=70 Score=31.17 Aligned_cols=52 Identities=8% Similarity=0.072 Sum_probs=34.7
Q ss_pred eeEEEcCCC--CceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCC
Q 005466 216 LNMVAHPDG--SNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 281 (695)
Q Consensus 216 ~~m~~~pDG--s~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhP 281 (695)
..|+|+||+ .+.++.+..+|.|+++++...+ ..+ .......+.....++|+|
T Consensus 43 ~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~------------~~~~~~h~~~v~~~~~~~ 96 (368)
T 3mmy_A 43 GCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTI------------PKAQQMHTGPVLDVCWSD 96 (368)
T ss_dssp EEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEE------------EEEEEECSSCEEEEEECT
T ss_pred EEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--cee------------EEEeccccCCEEEEEECc
Confidence 688999994 3467777789999998864212 111 012233456789999998
No 160
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=70.72 E-value=36 Score=34.04 Aligned_cols=54 Identities=9% Similarity=0.110 Sum_probs=33.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|||. .++++..+|.|+++++.. +. .. .+...+....+.....++|+|+
T Consensus 104 ~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~--~~---------~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 104 TFVRWSPNED-KFAVGSGARVISVCYFEQ-EN--DW---------WVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EEEECCTTSS-CCEEEESSSCEEECCC--------C---------CCCEEECSSCCSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEecCCeEEEEEECC-cc--cc---------eeeeEeecccCCCeEEEEEcCC
Confidence 6889999985 678888899999886422 11 10 0001111113567889999984
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=70.68 E-value=26 Score=34.37 Aligned_cols=55 Identities=7% Similarity=0.062 Sum_probs=34.5
Q ss_pred eeEEEcC---CCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHP---DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~p---DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..+++.| +|. .++++..+|.|+++++.. + +.+ ..+..............++|+|+
T Consensus 213 ~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~--~~~--------~~~~~~~~~~~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 213 CSLEFDRKDISMN-KLVATSLEGKFHVFDMRT-Q--HPT--------KGFASVSEKAHKSTVWQVRHLPQ 270 (357)
T ss_dssp EEEEESCSSSSCC-EEEEEESTTEEEEEEEEE-E--ETT--------TEEEEEEEECCSSCEEEEEEETT
T ss_pred EEEEcCCCCCCCC-EEEEECCCCeEEEEeCcC-C--Ccc--------cceeeeccCCCcCCEEEEEECCC
Confidence 7899999 774 678888899999987532 1 111 00000011244567899999984
No 162
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=70.31 E-value=56 Score=37.64 Aligned_cols=38 Identities=21% Similarity=0.514 Sum_probs=26.9
Q ss_pred ccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCC
Q 005466 373 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 419 (695)
Q Consensus 373 GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg 419 (695)
...+++.| ++.||+..+|+.. |+. + +..|.|.|.+..|
T Consensus 246 ~~~~~~~~-~~~l~~~~~d~~g---~y~--~---~~~g~v~~s~d~G 283 (737)
T 2cn3_A 246 PHHGVLAS-NGMLYITYGDTCG---PYD--G---NGKGQVWKFNTRT 283 (737)
T ss_dssp EEEEEECT-TSEEEEEEESSCC---SSC--C---SCCEEEEEEETTT
T ss_pred ceEEEECC-CCeEEEEecCCCC---ccc--c---ccCceEEEEeCCC
Confidence 34567899 9999999998642 221 1 2468899998665
No 163
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=69.94 E-value=84 Score=30.57 Aligned_cols=50 Identities=8% Similarity=0.007 Sum_probs=33.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|+++|||. .++++..+|.|+++++.. + +.+. ...........++|+|+
T Consensus 36 ~~~~~s~~~~-~l~~~~~dg~i~vwd~~~-~--~~~~-------------~~~~h~~~v~~~~~~~~ 85 (369)
T 3zwl_B 36 TQVKYNKEGD-LLFSCSKDSSASVWYSLN-G--ERLG-------------TLDGHTGTIWSIDVDCF 85 (369)
T ss_dssp EEEEECTTSC-EEEEEESSSCEEEEETTT-C--CEEE-------------EECCCSSCEEEEEECTT
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEeCCC-c--hhhh-------------hhhhcCCcEEEEEEcCC
Confidence 7899999995 566677899999987532 2 2221 11223456889999983
No 164
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=69.93 E-value=37 Score=34.19 Aligned_cols=27 Identities=11% Similarity=0.156 Sum_probs=22.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|++.||+.+.++.+..+|.|+++++
T Consensus 117 ~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 117 KTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 789999995557777888999999875
No 165
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=69.35 E-value=33 Score=37.27 Aligned_cols=52 Identities=10% Similarity=0.119 Sum_probs=33.5
Q ss_pred cCCCCceEEEEeeC-----ceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 221 HPDGSNRAFFSNQE-----GKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 221 ~pDGs~RlfV~Eq~-----G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
.+|+. |+||+++. +.|.+++. + +++.+ .++..+. . . +|+++|| ..++||.-+
T Consensus 81 ~~~~~-~vyV~n~~~~~~~~~VsVID~-~--t~~vv------------~~I~vG~-~-P-gia~SpD---gk~lyVan~ 137 (426)
T 3c75_H 81 APDAR-RVYIQDPAHFAAITQQFVIDG-S--TGRIL------------GMTDGGF-L-P-HPVAAED---GSFFAQAST 137 (426)
T ss_dssp CCCTT-EEEEEECTTTCSSEEEEEEET-T--TTEEE------------EEEEECS-S-C-EEEECTT---SSCEEEEEE
T ss_pred CCCCC-EEEEECCCcCCCCCeEEEEEC-C--CCEEE------------EEEECCC-C-C-ceEECCC---CCEEEEEec
Confidence 46774 89999984 68998873 2 22222 1333333 2 4 9999996 457999764
No 166
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=69.22 E-value=90 Score=30.60 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=34.6
Q ss_pred eeEEEcCC--CCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|+ |. .++++..+|.|+++++.. +... ..............++|+|.
T Consensus 105 ~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~-~~~~-------------~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 105 NSVQWAPHEYGP-LLLVASSDGKVSVVEFKE-NGTT-------------SPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEECCT-TSCC-------------CEEEEECCTTCEEEEEECCC
T ss_pred EEEEeCCCCCCC-EEEEecCCCcEEEEecCC-CCce-------------eeEEecCCCCceEEEEEcCc
Confidence 78999999 64 677778899999987532 2100 01122234567899999985
No 167
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=69.11 E-value=81 Score=30.94 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=36.7
Q ss_pred eeEEEcC-------------CCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHP-------------DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~p-------------DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++| |+. .++++..+|.|+++++.. +.. ... + .............++|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~-~~~---------~-~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNS-DAQ-TYV---------L-ESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp EEEEECCCC----------CTTC-EEEEEETTSCEEEEEEET-TTT-EEE---------E-EEEECCCSSCEEEEEECCC
T ss_pred EEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecC-CCc-cee---------e-EEEEecccCcEeEEEECCC
Confidence 6788898 563 577777899999987532 211 100 0 0111223456889999995
Q ss_pred CCCCCEEEEEE
Q 005466 283 FAKNGRFFASF 293 (695)
Q Consensus 283 F~~Ng~~YvsY 293 (695)
... +.+.++-
T Consensus 218 ~~~-~~~l~s~ 227 (379)
T 3jrp_A 218 VLL-RSYLASV 227 (379)
T ss_dssp CSS-SEEEEEE
T ss_pred CCC-CCeEEEE
Confidence 311 4554443
No 168
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=68.98 E-value=21 Score=36.52 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++||| +++++-.+|.|+++++.. .++.+. .+++.+............++|+|+
T Consensus 181 ~~~~~~~~~--~~l~s~~d~~i~iwd~~~--~~~~~~------~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 181 NSISINSDY--ETYLSADDLRINLWHLEI--TDRSFN------IVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp CEEEECTTS--SEEEEECSSEEEEEETTE--EEEEEE------EEECCCSSGGGCCCCEEEEEECSS
T ss_pred EEEEEcCCC--CEEEEeCCCeEEEEECCC--CCceee------eeecccccccccCcceEEEEECCC
Confidence 789999998 455555899999997531 112221 112211112233456889999984
No 169
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=68.83 E-value=24 Score=38.48 Aligned_cols=26 Identities=8% Similarity=0.011 Sum_probs=17.8
Q ss_pred eeEEEcCCCCceEEEEeeC----ceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQE----GKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~----G~V~~~~~ 242 (695)
+..+++|||. ++..+..+ +.||++++
T Consensus 153 ~~~~~spDG~-~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 153 FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp CEEEEEEETT-EEEEEEEEETTEEEEEEEET
T ss_pred ceEEECCCCC-EEEEEEEcCCCCeEEEEEcC
Confidence 7888999995 34434443 67888864
No 170
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=68.46 E-value=74 Score=31.79 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=22.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|++.||| .+++...+|.|+++++
T Consensus 190 ~~~~~~~~~--~l~~~~~dg~i~i~d~ 214 (397)
T 1sq9_A 190 TSVDISERG--LIATGFNNGTVQISEL 214 (397)
T ss_dssp CEEEECTTS--EEEEECTTSEEEEEET
T ss_pred eEEEECCCc--eEEEEeCCCcEEEEEC
Confidence 789999999 7888889999999975
No 171
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=68.11 E-value=1.1e+02 Score=31.13 Aligned_cols=27 Identities=26% Similarity=0.457 Sum_probs=23.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++++|+|.+.++.+..+|.|+++++
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 789999998557888888999999975
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=67.60 E-value=1e+02 Score=30.72 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=16.8
Q ss_pred EEEcCCCCceEEEEeeCc--eEEEEEc
Q 005466 218 MVAHPDGSNRAFFSNQEG--KIWLATI 242 (695)
Q Consensus 218 m~~~pDGs~RlfV~Eq~G--~V~~~~~ 242 (695)
.+++|||..=+|+.++.| .||++++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~ 67 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDL 67 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeC
Confidence 678999963344444467 5888864
No 173
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=67.01 E-value=14 Score=38.06 Aligned_cols=61 Identities=16% Similarity=0.274 Sum_probs=39.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEee
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNC 295 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs~ 295 (695)
..|+|+|||. .|.++..+|.|+++++. +++.+. .++. .-.....++||+| +|++.++-+.
T Consensus 273 ~~~~~Spdg~-~lasgs~D~~V~iwd~~---~~~~~~-----~~~~-------gH~~~V~~v~fSp----dg~~laS~S~ 332 (365)
T 4h5i_A 273 TSMDVDMKGE-LAVLASNDNSIALVKLK---DLSMSK-----IFKQ-------AHSFAITEVTISP----DSTYVASVSA 332 (365)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEETT---TTEEEE-----EETT-------SSSSCEEEEEECT----TSCEEEEEET
T ss_pred EeEEECCCCC-ceEEEcCCCEEEEEECC---CCcEEE-----EecC-------cccCCEEEEEECC----CCCEEEEEeC
Confidence 6799999994 45556689999999752 233321 1111 1234578999999 5777776654
Q ss_pred c
Q 005466 296 D 296 (695)
Q Consensus 296 ~ 296 (695)
|
T Consensus 333 D 333 (365)
T 4h5i_A 333 A 333 (365)
T ss_dssp T
T ss_pred C
Confidence 3
No 174
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=66.96 E-value=1e+02 Score=30.79 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=38.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCcee-eCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVH-FDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~-~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..|++.|||.+.++.+..+|.|+++++.. +. ... ... .+......+++|+|+ ++.+.++-
T Consensus 77 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~--~~~------------~~~~~~h~~~v~~~~~~~~---~~~~l~s~ 137 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSKGGDIILWDYDV-QN--KTS------------FIQGMGPGDAITGMKFNQF---NTNQLFVS 137 (383)
T ss_dssp EEEEECSSCTTEEEEEEBTSCEEEEETTS-TT--CEE------------EECCCSTTCBEEEEEEETT---EEEEEEEE
T ss_pred EEEEECCCCCCEEEEEcCCCeEEEEeCCC-cc--cce------------eeecCCcCCceeEEEeCCC---CCCEEEEE
Confidence 78999999955788888899999997532 21 110 011 134567889999983 34444443
No 175
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=65.91 E-value=53 Score=36.82 Aligned_cols=50 Identities=12% Similarity=0.038 Sum_probs=34.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|+++|||. .+.++..+|.|+++++. . ++.+. .....+.....++|+|+
T Consensus 17 ~~i~~sp~~~-~la~~~~~g~v~iwd~~-~--~~~~~-------------~~~~~~~~v~~~~~s~~ 66 (814)
T 3mkq_A 17 KGIDFHPTEP-WVLTTLYSGRVEIWNYE-T--QVEVR-------------SIQVTETPVRAGKFIAR 66 (814)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETT-T--TEEEE-------------EEECCSSCEEEEEEEGG
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECC-C--CceEE-------------EEecCCCcEEEEEEeCC
Confidence 7899999995 67777789999998752 2 22221 12233456789999984
No 176
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=65.84 E-value=1.1e+02 Score=30.40 Aligned_cols=61 Identities=18% Similarity=0.264 Sum_probs=37.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCC-CceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGL-GETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gs-g~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|+|||. .|..+..+|.|+++++.+.+. .+.+ .+...-......++|+|+ +.+.++-+
T Consensus 111 ~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~-------------~~~~~h~~~v~~v~~~p~----~~~l~s~s 172 (330)
T 2hes_X 111 KGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECI-------------SVLQEHSQDVKHVIWHPS----EALLASSS 172 (330)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEE-------------EEECCCSSCEEEEEECSS----SSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEE-------------EEeccCCCceEEEEECCC----CCEEEEEc
Confidence 6899999994 566667899999997532211 0111 112223456789999994 44555433
No 177
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=64.54 E-value=73 Score=31.08 Aligned_cols=60 Identities=12% Similarity=0.125 Sum_probs=36.9
Q ss_pred eeEEEcCCCC---ceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGS---NRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs---~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..++|.||+. ..++++..+|.|+++++. . ++.+ ............++|+|+ ++.+.++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~-~--~~~~-------------~~~~~~~~~i~~~~~~~~---~~~~l~s 133 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPI-T--MQCI-------------KHYVGHGNAINELKFHPR---DPNLLLS 133 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTT-T--CCEE-------------EEEESCCSCEEEEEECSS---CTTEEEE
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEch-h--ceEe-------------eeecCCCCcEEEEEECCC---CCCEEEE
Confidence 6788999843 246666789999998742 2 2221 112234567899999982 4545554
Q ss_pred Ee
Q 005466 293 FN 294 (695)
Q Consensus 293 Ys 294 (695)
-+
T Consensus 134 ~~ 135 (366)
T 3k26_A 134 VS 135 (366)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 178
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=63.98 E-value=1e+02 Score=31.50 Aligned_cols=50 Identities=14% Similarity=0.221 Sum_probs=33.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++|+|||. .++.+..+|.|+++++. . ++.+ .+..+-+.....++|+|+
T Consensus 127 ~~v~~s~dg~-~l~s~~~d~~i~iwd~~-~--~~~~-------------~~~~~h~~~v~~~~~~p~ 176 (393)
T 1erj_A 127 RSVCFSPDGK-FLATGAEDRLIRIWDIE-N--RKIV-------------MILQGHEQDIYSLDYFPS 176 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-T--TEEE-------------EEECCCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECC-C--CcEE-------------EEEccCCCCEEEEEEcCC
Confidence 5789999995 56667789999999752 2 2221 112233456789999984
No 179
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=63.27 E-value=97 Score=28.84 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=23.3
Q ss_pred cccceEEcCCCCe-EEEEecCCCCCCCccCccccCCCCCeeEEEEecCC
Q 005466 372 HGGQLLFGPTDGY-MYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 419 (695)
Q Consensus 372 ~GG~L~FGP~DG~-LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg 419 (695)
....+.|.| ||. |++...|++.... .....+.|..+|.++
T Consensus 218 ~~~~~~~s~-dg~~l~~~~~~~~~~~~-------~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 218 GDWFPHPSP-SGDKVVFVSYDADVFDH-------PRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCCSC-------CSSEEEEEEEEETTS
T ss_pred ccCCeEECC-CCCEEEEEEcCCCCCcc-------cccCceEEEEEecCC
Confidence 344689999 885 5555555432211 112346788888766
No 180
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=62.24 E-value=67 Score=33.42 Aligned_cols=66 Identities=14% Similarity=0.146 Sum_probs=40.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..|++.|++.+.++.+..+|.|+++++........ .+.. ............+++|||+ ++.++++-
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------~~~~-~~~~~~h~~~v~~v~~~p~---~~~~l~s~ 250 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR--------VIDA-KNIFTGHTAVVEDVAWHLL---HESLFGSV 250 (430)
T ss_dssp CCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG--------EEEC-SEEECCCSSCEEEEEECSS---CTTEEEEE
T ss_pred EEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc--------eecc-ceeecCCCCCEeeeEEeCC---CCCEEEEE
Confidence 78999999976677777899999998633111110 0110 1122234566899999984 45555543
No 181
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=62.15 E-value=1.1e+02 Score=34.23 Aligned_cols=76 Identities=12% Similarity=0.129 Sum_probs=44.7
Q ss_pred CcEEEEEecCce---eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeC
Q 005466 204 GLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 280 (695)
Q Consensus 204 G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfh 280 (695)
++.+.....|-. ..+++.|++++.|..+..+|.|+++++..... .. ........+-......++|+
T Consensus 371 ~l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~--~~---------~~~~~~~~~h~~~v~~v~~s 439 (694)
T 3dm0_A 371 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK--AY---------GVAQRRLTGHSHFVEDVVLS 439 (694)
T ss_dssp SSEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT--CS---------CEEEEEEECCSSCEEEEEEC
T ss_pred ccchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc--cc---------ccccceecCCCCcEEEEEEC
Confidence 556655544443 78889998865566667899999997632111 00 00011223345567899999
Q ss_pred CCCCCCCEEEEEEe
Q 005466 281 PNFAKNGRFFASFN 294 (695)
Q Consensus 281 PdF~~Ng~~YvsYs 294 (695)
| +|.+.++-+
T Consensus 440 ~----~g~~l~sgs 449 (694)
T 3dm0_A 440 S----DGQFALSGS 449 (694)
T ss_dssp T----TSSEEEEEE
T ss_pred C----CCCEEEEEe
Confidence 8 455555443
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=61.88 E-value=47 Score=35.48 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=33.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 281 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhP 281 (695)
..|+++|||. .+.++..+|.|+++++.. ++.+. . ...........++|+|
T Consensus 492 ~~~~~s~~g~-~l~~~~~dg~i~iw~~~~---~~~~~-----~-------~~~~h~~~v~~~~~sp 541 (615)
T 1pgu_A 492 SYISISPSET-YIAAGDVMGKILLYDLQS---REVKT-----S-------RWAFRTSKINAISWKP 541 (615)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTT---TEEEE-----C-------CSCCCSSCEEEEEECC
T ss_pred EEEEECCCCC-EEEEcCCCCeEEEeeCCC---Cccee-----E-------eecCCCCceeEEEEcC
Confidence 7899999995 566677899999997532 22221 0 0001345688999998
No 183
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=61.69 E-value=1.2e+02 Score=30.53 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=37.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..++|.||+. +++.+..+|.|+++++. .+ +.++ ...........++|+|+- +|.++++-+
T Consensus 158 ~~~~~~~~~~-~l~t~s~D~~v~lwd~~-~~--~~~~-------------~~~~h~~~v~~~~~~~~~--~g~~l~sgs 217 (354)
T 2pbi_B 158 SACSFTNSDM-QILTASGDGTCALWDVE-SG--QLLQ-------------SFHGHGADVLCLDLAPSE--TGNTFVSGG 217 (354)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETT-TC--CEEE-------------EEECCSSCEEEEEECCCS--SCCEEEEEE
T ss_pred EEEEEeCCCC-EEEEEeCCCcEEEEeCC-CC--eEEE-------------EEcCCCCCeEEEEEEeCC--CCCEEEEEe
Confidence 6789999985 67778889999999752 22 2221 122334457788888742 444444433
No 184
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=61.55 E-value=76 Score=31.69 Aligned_cols=26 Identities=15% Similarity=0.268 Sum_probs=21.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++++|||. .|..+..+|.|+++++
T Consensus 217 ~~~~~s~~g~-~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 217 NHLSISPNGK-YIATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEES
T ss_pred eEEEECCCCC-EEEEEcCCCeEEEEEC
Confidence 6789999994 4666678999999875
No 185
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=61.51 E-value=67 Score=32.05 Aligned_cols=49 Identities=8% Similarity=0.139 Sum_probs=34.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..+++.||| ++++...+|.|+++++. . ++.+. .....+.....++|+|+
T Consensus 293 ~~~~~~~~~--~l~~~~~d~~i~i~d~~-~--~~~~~-------------~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 293 VSASWVGDD--KVISCSMDGSVRLWSLK-Q--NTLLA-------------LSIVDGVPIFAGRISQD 341 (425)
T ss_dssp EEEEEETTT--EEEEEETTSEEEEEETT-T--TEEEE-------------EEECTTCCEEEEEECTT
T ss_pred EEEEECCCC--EEEEEeCCCcEEEEECC-C--CcEeE-------------ecccCCccEEEEEEcCC
Confidence 789999999 78888899999999752 2 22221 11223456789999984
No 186
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=60.31 E-value=93 Score=31.39 Aligned_cols=50 Identities=12% Similarity=0.182 Sum_probs=34.5
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|+++|||. .++.+..+|.|+++++.. + +.+ ............++|+|+
T Consensus 143 ~~~~~~~~~~-~l~s~s~d~~i~iwd~~~-~--~~~-------------~~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 143 TKLKFFPSGE-ALISSSQDMQLKIWSVKD-G--SNP-------------RTLIGHRATVTDIAIIDR 192 (420)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT-C--CCC-------------EEEECCSSCEEEEEEETT
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEeCCC-C--cCc-------------eEEcCCCCcEEEEEEcCC
Confidence 7899999985 577777899999998532 2 111 112234566889999984
No 187
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=60.11 E-value=81 Score=31.43 Aligned_cols=49 Identities=12% Similarity=0.188 Sum_probs=33.0
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|++.|||. .++++..+|.|++++ .++ +.+. ...........++|+|+
T Consensus 112 ~~~~~s~~~~-~l~~~~~dg~i~i~~--~~~--~~~~-------------~~~~~~~~v~~~~~~~~ 160 (425)
T 1r5m_A 112 TCLAWSHDGN-SIVTGVENGELRLWN--KTG--ALLN-------------VLNFHRAPIVSVKWNKD 160 (425)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEE--TTS--CEEE-------------EECCCCSCEEEEEECTT
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEe--CCC--Ceee-------------eccCCCccEEEEEECCC
Confidence 7899999985 677777899999986 222 2211 11123456789999984
No 188
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=60.08 E-value=32 Score=34.46 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=35.6
Q ss_pred eeEEEcCCCCceEEEE-eeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFS-NQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~-Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..++++||| +++++ ..+|.|+++++. .+. .+. . .....-+.....++|+| +|.+.++-
T Consensus 174 ~~~~~~pdg--~~lasg~~dg~i~iwd~~-~~~--~~~----~-------~~~~~h~~~v~~l~fs~----~g~~l~s~ 232 (343)
T 3lrv_A 174 SSGVLHKDS--LLLALYSPDGILDVYNLS-SPD--QAS----S-------RFPVDEEAKIKEVKFAD----NGYWMVVE 232 (343)
T ss_dssp CEEEECTTS--CEEEEECTTSCEEEEESS-CTT--SCC----E-------ECCCCTTSCEEEEEECT----TSSEEEEE
T ss_pred EEEEECCCC--CEEEEEcCCCEEEEEECC-CCC--CCc----c-------EEeccCCCCEEEEEEeC----CCCEEEEE
Confidence 688999999 45554 789999999853 221 110 0 01111245688999998 45544443
No 189
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=59.83 E-value=1.2e+02 Score=34.72 Aligned_cols=25 Identities=8% Similarity=0.005 Sum_probs=22.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLAT 241 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~ 241 (695)
+.++|+|||. ++-++..+|.|++++
T Consensus 89 ~~vawSPdG~-~LAs~s~dg~V~iwd 113 (588)
T 2j04_A 89 RVCKPSPIDD-WMAVLSNNGNVSVFK 113 (588)
T ss_dssp EEEEECSSSS-CEEEEETTSCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEe
Confidence 7899999996 788888999999986
No 190
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=59.78 E-value=1e+02 Score=30.19 Aligned_cols=52 Identities=13% Similarity=0.122 Sum_probs=33.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|++.|||. .++.+..+|.|+++++.. + +... .............++|+|+
T Consensus 56 ~~~~~~~~~~-~l~~~~~dg~i~vwd~~~-~--~~~~-----------~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 56 TGVDWAPDSN-RIVTCGTDRNAYVWTLKG-R--TWKP-----------TLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEEEET-T--EEEE-----------EEECCCCSSCEEEEEECTT
T ss_pred cEEEEeCCCC-EEEEEcCCCeEEEEECCC-C--eeee-----------eEEeecCCCceeEEEECCC
Confidence 7899999985 567777899999987532 2 1110 0011223456889999984
No 191
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=59.18 E-value=2.2e+02 Score=31.52 Aligned_cols=18 Identities=11% Similarity=0.137 Sum_probs=13.9
Q ss_pred cceeeeecCCCCCeEEEEE
Q 005466 460 NPWRCSFDSDRPSYFMCAD 478 (695)
Q Consensus 460 NP~r~sfD~~~g~~l~~~D 478 (695)
-|+.+++++.. .+||++.
T Consensus 382 gPr~~~lSpDG-k~LyVaN 399 (462)
T 2ece_A 382 APQMLEISRDG-RRVYVTN 399 (462)
T ss_dssp CCCCEEECTTS-SEEEEEC
T ss_pred CCCEEEEcCCC-CEEEEEc
Confidence 48888998874 5788875
No 192
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=58.90 E-value=1.3e+02 Score=29.07 Aligned_cols=51 Identities=18% Similarity=0.146 Sum_probs=34.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|||. .++++..+|.|+++++... .+.+ ...........+++|+|+
T Consensus 179 ~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--~~~~-------------~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 179 TVAGWSTKGK-YIIAGHKDGKISKYDVSNN--YEYV-------------DSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp EEEEECGGGC-EEEEEETTSEEEEEETTTT--TEEE-------------EEEECCSSCEEEEEECTT
T ss_pred eEEEEcCCCC-EEEEEcCCCEEEEEECCCC--cEeE-------------EEEecCCCceeEEEECCC
Confidence 7889999985 6777788999999975321 1111 112233566889999984
No 193
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=58.86 E-value=1.3e+02 Score=32.36 Aligned_cols=136 Identities=14% Similarity=0.213 Sum_probs=80.3
Q ss_pred eeEEEcCC---CCceEEEEeeCc-eEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCc----eeeeeeCCCCCCCC
Q 005466 216 LNMVAHPD---GSNRAFFSNQEG-KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFG----LMGMAFHPNFAKNG 287 (695)
Q Consensus 216 ~~m~~~pD---Gs~RlfV~Eq~G-~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~G----LLGiAfhPdF~~Ng 287 (695)
-+|+.+|| |...||..--.| +++.+. . +.|+ ... +...|..-+++| -+++|.|+ ++|
T Consensus 223 ~gIaLsp~~~~~~~~LYf~plss~~ly~V~--T----~~L~--~~~----~~~~v~~~G~kg~~s~~~~~~~D~---~~G 287 (381)
T 3q6k_A 223 FGITLGDRDSEGNRPAYYLAGSAIKVYSVN--T----KELK--QKG----GKLNPELLGNRGKYNDAIALAYDP---KTK 287 (381)
T ss_dssp EEEEECCCCTTSCCEEEEEESSCSEEEEEE--H----HHHS--STT----CCCCCEEEEECCTTCCEEEEEECT---TTC
T ss_pred eEEEecCCcCCCCeEEEEEECCCCcEEEEE--H----HHhh--Ccc----hhhceEEeeecCCCCCcceEEEeC---CCC
Confidence 46777877 233677777777 566653 1 1221 111 123444445555 35678875 489
Q ss_pred EEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCeEEEEEecCC
Q 005466 288 RFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLS 367 (695)
Q Consensus 288 ~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~l~~dnG~~~~~~~~~Isr~t~~~~~~~~~~~~~~~~~e~~~Il~~~~P 367 (695)
.+|+.... ...|.+|..+.. .-.+...++|... |
T Consensus 288 ~ly~~~~~------------------------------------~~aI~~w~~~~~--------~~~~~n~~~l~~d--~ 321 (381)
T 3q6k_A 288 VIFFAEAN------------------------------------TKQVSCWNTQKM--------PLRMKNTDVVYTS--S 321 (381)
T ss_dssp EEEEEESS------------------------------------SSEEEEEETTSC--------SBCGGGEEEEEEC--T
T ss_pred eEEEEecc------------------------------------CCeEEEEeCCCC--------ccccCceEEEEEC--C
Confidence 98886542 137778864320 0112344555542 3
Q ss_pred CCCccccceEEcCCCCeEEEEecCCCCCCCccCccc--cCCCCCeeEEEE-ecC
Q 005466 368 FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQ--NKKSLLGKITRL-DVD 418 (695)
Q Consensus 368 ~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQ--n~ssl~GKILRI-dvD 418 (695)
.-.+.-.|.++. ||+||+.+---- .+...+ |.....=.|+|+ +++
T Consensus 322 -~l~~pd~~~i~~-~g~Lwv~sn~l~----~~~~g~l~d~~~~nfrI~r~~~~~ 369 (381)
T 3q6k_A 322 -RFVFGTDISVDS-KGGLWFMSNGFP----PIRKSEKFKYDFPRYRLMRIMDTQ 369 (381)
T ss_dssp -TCCSEEEEEECT-TSCEEEEECSCC----SSTTGGGCCCSSCSEEEEEESCHH
T ss_pred -CccccCeEEECC-CCeEEEEECcch----HhhcCCcCCCCcCCEEEEEecCHH
Confidence 456677889998 999999995421 244444 777788889999 764
No 194
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=58.75 E-value=15 Score=37.75 Aligned_cols=63 Identities=24% Similarity=0.273 Sum_probs=38.4
Q ss_pred EEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCce--eeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 218 MVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEV--HFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 218 m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V--~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
|.+. || ++|+.. +...|.+++ |+. ++.+. ...+-.+.+.. ....+..|-|||++|+ ..+|||.
T Consensus 177 Le~~-~G--~lyan~w~~~~I~vID-p~t--G~V~~---~Id~~~L~~~~~~~~~~~~vlNGIA~dp~---~~~lfVT 242 (262)
T 3nol_A 177 LEWV-DG--EIFANVWQTNKIVRID-PET--GKVTG---IIDLNGILAEAGPLPSPIDVLNGIAWDKE---HHRLFVT 242 (262)
T ss_dssp EEEE-TT--EEEEEETTSSEEEEEC-TTT--CBEEE---EEECTTGGGGSCSCCSSCCCEEEEEEETT---TTEEEEE
T ss_pred eEEE-CC--EEEEEEccCCeEEEEE-CCC--CcEEE---EEECCcCccccccccCcCCceEEEEEcCC---CCEEEEE
Confidence 5555 77 899988 578898886 544 34332 11111222221 1233467899999994 6789985
No 195
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=58.63 E-value=54 Score=32.71 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=21.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|+++|||. .+..+..+|.|+++++
T Consensus 150 ~~~~~~~~~~-~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 150 LSLDWHPNNV-LLAAGCADRKAYVLSA 175 (377)
T ss_dssp EEEEECTTSS-EEEEEESSSCEEEEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEEE
Confidence 7899999984 5677778999999875
No 196
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=58.51 E-value=1e+02 Score=32.04 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=38.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
..++|.|||. .++++.++|.|+++++.+ +. .. ..+. .....-......++|+|+. ..+.+.++
T Consensus 153 ~~~~~sp~~~-~l~~~~~~g~v~~~~~~~-~~--~~----~~~~-----~~~~~h~~~v~~~~~sp~~-~~~~~l~s 215 (450)
T 2vdu_B 153 NAISIAEDDT-TVIIADKFGDVYSIDINS-IP--EE----KFTQ-----EPILGHVSMLTDVHLIKDS-DGHQFIIT 215 (450)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTS-CC--CS----SCCC-----CCSEECSSCEEEEEEEECT-TSCEEEEE
T ss_pred eEEEEcCCCC-EEEEEeCCCcEEEEecCC-cc--cc----cccc-----eeeecccCceEEEEEcCCC-CCCcEEEE
Confidence 7899999995 688888999999987532 21 10 0000 1112334678899999953 12544443
No 197
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=58.20 E-value=50 Score=36.39 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=36.3
Q ss_pred CceeeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 213 GSYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 213 Gl~~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
|-.+.++|.||| +.++.-..+.|+++++. ++. .+ .+..+-+.....++|+| +|.+-++
T Consensus 19 g~~~~~~~spdg--~~l~~~~~~~v~l~~~~-~~~--~~-------------~~~~~h~~~v~~~~~sp----dg~~las 76 (611)
T 1nr0_A 19 GTAVVLGNTPAG--DKIQYCNGTSVYTVPVG-SLT--DT-------------EIYTEHSHQTTVAKTSP----SGYYCAS 76 (611)
T ss_dssp TCCCCCEECTTS--SEEEEEETTEEEEEETT-CSS--CC-------------EEECCCSSCEEEEEECT----TSSEEEE
T ss_pred CceeEEeeCCCC--CEEEeCCCCEEEEecCC-Ccc--cC-------------eEecCCCCceEEEEECC----CCcEEEE
Confidence 334778899999 45555556788887642 221 11 12223345678899999 4665555
Q ss_pred Ee
Q 005466 293 FN 294 (695)
Q Consensus 293 Ys 294 (695)
-+
T Consensus 77 g~ 78 (611)
T 1nr0_A 77 GD 78 (611)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 198
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=57.43 E-value=41 Score=34.71 Aligned_cols=73 Identities=5% Similarity=-0.105 Sum_probs=42.2
Q ss_pred EEEEecCceeeEEEcCCCCceEEEEe----------eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceee
Q 005466 207 LEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 276 (695)
Q Consensus 207 le~va~Gl~~~m~~~pDGs~RlfV~E----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLG 276 (695)
+.++..|..-.|+++|||. ++||+. +.+.|.+++. + +++.++ .. .+... ........-+
T Consensus 44 ~~~i~~g~~p~i~~spdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~-~--t~~~~~---~i---~~~~~-~~~~g~~p~~ 112 (361)
T 2oiz_A 44 LGMVPTAFNGHVQVSNDGK-KIYTMTTYHERITRGKRSDVVEVWDA-D--KLTFEK---EI---SLPPK-RVQGLNYDGL 112 (361)
T ss_dssp EEEEECCEEEEEEECTTSS-EEEEEEEEETTSSSSCEEEEEEEEET-T--TCCEEE---EE---EECTT-BCCBCCCGGG
T ss_pred EEEecCCCCCceEECCCCC-EEEEEEecccccccCCCCCEEEEEEC-c--CCcEEE---EE---EcCcc-ccccCCCcce
Confidence 3455555445899999996 799997 3567888863 2 222221 00 00000 0011235678
Q ss_pred eeeCCCCCCCCEEEEEE
Q 005466 277 MAFHPNFAKNGRFFASF 293 (695)
Q Consensus 277 iAfhPdF~~Ng~~YvsY 293 (695)
|+|+|| ..++|++-
T Consensus 113 i~~spd---g~~l~v~n 126 (361)
T 2oiz_A 113 FRQTTD---GKFIVLQN 126 (361)
T ss_dssp EEECTT---SSEEEEEE
T ss_pred EEECCC---CCEEEEEC
Confidence 999995 45788863
No 199
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=57.41 E-value=2e+02 Score=30.62 Aligned_cols=68 Identities=15% Similarity=0.108 Sum_probs=41.6
Q ss_pred cceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCCCCCeE
Q 005466 374 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 453 (695)
Q Consensus 374 G~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~~~pEI 453 (695)
..++.++..|+|||+-=| .| |+||+.+... ++ .+..|
T Consensus 183 EgcvvDd~~g~Lyv~eEd-----------------~G-Iw~~da~p~~------------------~~-------~~~~v 219 (355)
T 3amr_A 183 EGMAADDEYGRLYIAEED-----------------EA-IWKFSAEPDG------------------GS-------NGTVI 219 (355)
T ss_dssp EEEEEETTTTEEEEEETT-----------------TE-EEEEECSTTS------------------CS-------CCEEE
T ss_pred ceEEEcCCCCeEEEeccc-----------------ce-EEEEeCCcCC------------------CC-------CceEE
Confidence 357777756999995422 45 9999966410 00 11233
Q ss_pred EEeccc----cceeeeecCCC-CC-eEEEEEccCCCc
Q 005466 454 WALGLR----NPWRCSFDSDR-PS-YFMCADVGQDVY 484 (695)
Q Consensus 454 ~A~GlR----NP~r~sfD~~~-g~-~l~~~DvG~d~~ 484 (695)
-..+.. .+-++++.+.. +. +|++++.|.+.+
T Consensus 220 ~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 220 DRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp EEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred EEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 333333 78899986442 22 799999998653
No 200
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=56.49 E-value=1.4e+02 Score=28.68 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=21.0
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|+++|||. .++.+..+|.|+++++
T Consensus 219 ~~~~~s~~~~-~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 219 NTVTVSPDGS-LCASGGKDGQAMLWDL 244 (340)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEET
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEEe
Confidence 6789999994 4566678999999875
No 201
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=55.95 E-value=73 Score=33.00 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=37.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|+|+||+. .++.+..+|.|+++++. .+. .+ ....+-.....+++|+| ++.+.++-+
T Consensus 112 ~~~~~~p~~~-~l~s~s~Dg~i~vwd~~-~~~--~~-------------~~l~~h~~~V~~v~~~~----~~~~l~sgs 169 (410)
T 1vyh_C 112 TRVIFHPVFS-VMVSASEDATIKVWDYE-TGD--FE-------------RTLKGHTDSVQDISFDH----SGKLLASCS 169 (410)
T ss_dssp EEEEECSSSS-EEEEEESSSCEEEEETT-TCC--CC-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECC-CCc--EE-------------EEEeccCCcEEEEEEcC----CCCEEEEEe
Confidence 7899999995 45666689999999753 221 11 11222345678999998 455555443
No 202
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=55.86 E-value=2.5e+02 Score=31.24 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=34.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++|+|||. ++.++..+|.|+++++. .+ +.+. ...........++|+|+
T Consensus 59 ~~~~~s~~~~-~l~~~~~dg~i~vw~~~-~~--~~~~-------------~~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 59 RAGKFIARKN-WIIVGSDDFRIRVFNYN-TG--EKVV-------------DFEAHPDYIRSIAVHPT 108 (814)
T ss_dssp EEEEEEGGGT-EEEEEETTSEEEEEETT-TC--CEEE-------------EEECCSSCEEEEEECSS
T ss_pred EEEEEeCCCC-EEEEEeCCCeEEEEECC-CC--cEEE-------------EEecCCCCEEEEEEeCC
Confidence 7899999995 67777789999999753 22 2211 11233456889999984
No 203
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=55.70 E-value=2.4e+02 Score=31.02 Aligned_cols=26 Identities=15% Similarity=0.174 Sum_probs=19.2
Q ss_pred eeEEEcCCCCceEEEEeeCc-----eEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEG-----KIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G-----~V~~~~~ 242 (695)
..++|+|||. +++++..++ .|+++++
T Consensus 261 ~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 261 TNLSWSPDEN-ILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp EEEEECTTSS-EEEEEEECTTSCEEEEEEEET
T ss_pred eeEEEECCCC-EEEEEEeCCCCCeeEEEEEEC
Confidence 6789999995 577755543 8888874
No 204
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=55.02 E-value=1.8e+02 Score=29.59 Aligned_cols=49 Identities=14% Similarity=0.213 Sum_probs=32.3
Q ss_pred eeEEEcCCCCceEEEEe---eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSN---QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E---q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..|+++|+|. .++++- .+|.|+++++.. ++.+. .+ ........++|+|+
T Consensus 263 ~~~~~~p~~~-~ll~~~~gs~d~~i~i~d~~~---~~~~~------------~~--~~~~~v~~~~~s~~ 314 (401)
T 4aez_A 263 KAVAWCPWQS-NLLATGGGTMDKQIHFWNAAT---GARVN------------TV--DAGSQVTSLIWSPH 314 (401)
T ss_dssp CEEEECTTST-TEEEEECCTTTCEEEEEETTT---CCEEE------------EE--ECSSCEEEEEECSS
T ss_pred EEEEECCCCC-CEEEEecCCCCCEEEEEECCC---CCEEE------------EE--eCCCcEEEEEECCC
Confidence 7899999986 466653 589999997532 22221 11 22346889999984
No 205
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=54.95 E-value=1.7e+02 Score=29.11 Aligned_cols=39 Identities=10% Similarity=0.142 Sum_probs=27.6
Q ss_pred CcEEEEEecCce-eeEEEcC-CCCceEEEEeeCceEEEEEcc
Q 005466 204 GLCLEKIGNGSY-LNMVAHP-DGSNRAFFSNQEGKIWLATIP 243 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~p-DGs~RlfV~Eq~G~V~~~~~p 243 (695)
+-++..+...-. ..+++.| ||. .++++..+|.|+++++.
T Consensus 241 ~~~~~~~~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 241 NSYIAEMPHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp TCEEEEEECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETT
T ss_pred cceEEEecCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECC
Confidence 445555543223 8899999 885 67777789999999863
No 206
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=54.63 E-value=1.2e+02 Score=31.37 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=33.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++|+|||. .++.+..+|.|+++++. . ++.+. ...+-+.....++|+|+
T Consensus 154 ~~v~~~~~~~-~l~sgs~D~~i~iwd~~-~--~~~~~-------------~~~~h~~~V~~v~~~p~ 203 (410)
T 1vyh_C 154 QDISFDHSGK-LLASCSADMTIKLWDFQ-G--FECIR-------------TMHGHDHNVSSVSIMPN 203 (410)
T ss_dssp EEEEECTTSS-EEEEEETTSCCCEEETT-S--SCEEE-------------CCCCCSSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCC-C--CceeE-------------EEcCCCCCEEEEEEeCC
Confidence 6789999985 56667789999998752 1 22221 11123456889999984
No 207
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=54.45 E-value=12 Score=37.89 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=26.4
Q ss_pred CCccceEEEcCCCcEEEEeCCeEEEEecCC
Q 005466 614 LGYIYSFGEDNRKDIFILTSDGVYRVVRPS 643 (695)
Q Consensus 614 ~gri~sf~ed~dGeLYvlts~gIYRIv~ps 643 (695)
+.++.+|+.+|||.||.+.++.|||+.+++
T Consensus 40 w~~~~~laf~P~G~LYaV~~G~Ly~~~~~t 69 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGVLNDKIYKGTPPT 69 (236)
T ss_dssp CTTCSEEEECTTSCEEEEETTEEEEESCCC
T ss_pred cccceeEEECCCccEEEEeCCeEEEECCCC
Confidence 457889999999999999777899998776
No 208
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=54.35 E-value=1.5e+02 Score=32.80 Aligned_cols=16 Identities=25% Similarity=0.465 Sum_probs=11.5
Q ss_pred eeEEEcCCCCceEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSN 232 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E 232 (695)
..++|+|||. +|+++.
T Consensus 176 ~~~~~SpDg~-~la~~~ 191 (723)
T 1xfd_A 176 IAHWWSPDGT-RLAYAA 191 (723)
T ss_dssp EEEEECTTSS-EEEEEE
T ss_pred ceEEECCCCC-EEEEEE
Confidence 4799999995 455554
No 209
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=54.21 E-value=72 Score=32.69 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=22.0
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|+++||+. .++++..+|.|+++++
T Consensus 115 ~~~~~~~~~~-~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 115 TQITMIPNFD-AFAVSSKDGQIIVLKV 140 (437)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCC-EEEEEeCCCEEEEEEe
Confidence 7899999985 6777888999999875
No 210
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=53.92 E-value=75 Score=36.25 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=38.8
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|+++|||. .++.+..+|.|+++++. .++++.+ ...........+++|+|+ .++.+.++-+
T Consensus 13 ~~l~~s~dg~-~latg~~dg~I~vwd~~-~~~~~~~-------------~~l~~h~~~V~~l~~s~~--~~~~~l~s~s 74 (753)
T 3jro_A 13 HDAVLDYYGK-RLATCSSDKTIKIFEVE-GETHKLI-------------DTLTGHEGPVWRVDWAHP--KFGTILASCS 74 (753)
T ss_dssp EEECCCSSSC-CEEEEETTTEEEEEEEE-TTEEEEE-------------EEECCCSSCEEEEEECCT--TSCSEEEEEE
T ss_pred EEEEECCCCC-eEEEEECCCcEEEEecC-CCCCccc-------------eeccCCcCceEEEEecCC--CCCCEEEEEe
Confidence 6788999995 67777789999998753 2222211 112233566889999875 2354544443
No 211
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=53.72 E-value=1.6e+02 Score=29.04 Aligned_cols=28 Identities=11% Similarity=0.057 Sum_probs=22.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEcc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIP 243 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p 243 (695)
..++++|+|...++++..+|.|+++++.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 7899999996335677789999999863
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=53.59 E-value=31 Score=36.64 Aligned_cols=71 Identities=8% Similarity=-0.024 Sum_probs=45.5
Q ss_pred CcEEEEEecCceeeEEEcCCCCceEEEEe----------eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCC--
Q 005466 204 GLCLEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTE-- 271 (695)
Q Consensus 204 G~~le~va~Gl~~~m~~~pDGs~RlfV~E----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E-- 271 (695)
+=.+.+|..|..-.++++|||. ++||+. +.+.|.+++. . +++.+ .++...+.
T Consensus 56 ~~v~~~i~vG~~P~i~~spDg~-~lyVan~~~~r~~~G~~~~~VsviD~-~--T~~vv------------~~I~v~~~~~ 119 (368)
T 1mda_H 56 GVTLGHSLGAFLSLAVAGHSGS-DFALASTSFARSAKGKRTDYVEVFDP-V--TFLPI------------ADIELPDAPR 119 (368)
T ss_dssp TEEEEEEEECTTCEEEECTTSS-CEEEEEEEETTTTSSSEEEEEEEECT-T--TCCEE------------EEEEETTSCS
T ss_pred CeEEEEEeCCCCCceEECCCCC-EEEEEcccccccccCCCCCEEEEEEC-C--CCCEE------------EEEECCCccc
Confidence 3345666666545899999997 899996 5788998863 2 22222 12222211
Q ss_pred ----CceeeeeeCCCCCCCCEEEEEE
Q 005466 272 ----FGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 272 ----~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
....+++|+|| ..++||..
T Consensus 120 ~~~g~~P~~ia~SpD---Gk~lyVan 142 (368)
T 1mda_H 120 FSVGPRVHIIGNCAS---SACLLFFL 142 (368)
T ss_dssp CCBSCCTTSEEECTT---SSCEEEEE
T ss_pred cccCCCcceEEEcCC---CCEEEEEc
Confidence 23578999995 45799974
No 213
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=53.43 E-value=1.8e+02 Score=28.73 Aligned_cols=63 Identities=6% Similarity=0.069 Sum_probs=37.5
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..+++.|++.+.++.+..+|.|+++++..... ... .+ -....+-......++|+| +|.+.++-
T Consensus 21 ~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~--~~~----~~-----~~~~~~h~~~v~~~~~s~----dg~~l~s~ 83 (319)
T 3frx_A 21 TSLATSAGQPNLLLSASRDKTLISWKLTGDDQ--KFG----VP-----VRSFKGHSHIVQDCTLTA----DGAYALSA 83 (319)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEEEEEETT--EEE----EE-----EEEEECCSSCEEEEEECT----TSSEEEEE
T ss_pred EEEEccCCCccEEEEecCCccEEEecCCCCCc--ccc----cc-----ceEEeCCcccEEEEEECC----CCCEEEEE
Confidence 67899998765677777899999887532110 000 00 012223456678899998 45554443
No 214
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=52.70 E-value=1.1e+02 Score=34.59 Aligned_cols=24 Identities=13% Similarity=0.182 Sum_probs=20.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++|.||| ++++.+ +|.|+++++
T Consensus 20 ~~~~w~~dg--~~~~~~-~~~i~~~~~ 43 (740)
T 4a5s_A 20 YSLRWISDH--EYLYKQ-ENNILVFNA 43 (740)
T ss_dssp CCEEECSSS--EEEEEE-TTEEEEEET
T ss_pred cccEECCCC--cEEEEc-CCcEEEEEC
Confidence 678999999 677776 999999874
No 215
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=51.91 E-value=1.7e+02 Score=28.20 Aligned_cols=50 Identities=8% Similarity=0.141 Sum_probs=33.0
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..+++.|||. .++.+..+|.|+++++.. ++.+. ...........++|+|+
T Consensus 69 ~~~~~~~~~~-~l~s~~~d~~i~vwd~~~---~~~~~-------------~~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 69 SDVAWSSDSN-LLVSASDDKTLKIWDVSS---GKCLK-------------TLKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT---CCEEE-------------EEECCSSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEECCCCEEEEEECCC---CcEEE-------------EEcCCCCCEEEEEEcCC
Confidence 6899999994 566777899999997532 22211 11123345788999984
No 216
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=50.15 E-value=39 Score=33.07 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=38.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..|+++|||. .++.+..+|.|+++++. +++.+. .....+....+++|+| +|.+.++-+
T Consensus 277 ~~~~~sp~~~-~l~s~~~dg~i~iwd~~---~~~~~~-------------~~~~~~~~v~~~~~s~----~g~~l~~~s 334 (368)
T 3mmy_A 277 NGIAFHPVHG-TLATVGSDGRFSFWDKD---ARTKLK-------------TSEQLDQPISACCFNH----NGNIFAYAS 334 (368)
T ss_dssp EEEEECTTTC-CEEEEETTSCEEEEETT---TTEEEE-------------ECCCCSSCEEEEEECT----TSSCEEEEE
T ss_pred EEEEEecCCC-EEEEEccCCeEEEEECC---CCcEEE-------------EecCCCCCceEEEECC----CCCeEEEEe
Confidence 5789999995 67777789999999853 222221 1112345688999998 455555444
No 217
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=49.24 E-value=95 Score=30.01 Aligned_cols=69 Identities=6% Similarity=0.084 Sum_probs=39.2
Q ss_pred CCcEEEEEecCce---eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeee
Q 005466 203 QGLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAF 279 (695)
Q Consensus 203 ~G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAf 279 (695)
+-+.++....|=. ..++|+||+.+.|+-+..+|.|+++++........ +......+-......++|
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-----------~~~~~l~~h~~~V~~~~~ 94 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-----------IPQRALRGHSHFVSDVVI 94 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE-----------EEEEEECCCSSCEEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc-----------eeeEEEeCCCCCEEEEEE
Confidence 3444554444533 78999999654444566899999987632111000 001122233566889999
Q ss_pred CCC
Q 005466 280 HPN 282 (695)
Q Consensus 280 hPd 282 (695)
+|+
T Consensus 95 s~d 97 (340)
T 4aow_A 95 SSD 97 (340)
T ss_dssp CTT
T ss_pred CCC
Confidence 984
No 218
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=49.01 E-value=1.3e+02 Score=35.80 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=34.4
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
+.++++|||. ++..+..+|.|+++++. .+ +.+. ...........++|+|+
T Consensus 619 ~~~~~s~~~~-~l~s~~~d~~i~vw~~~-~~--~~~~-------------~~~~h~~~v~~~~~s~~ 668 (1249)
T 3sfz_A 619 YHACFSQDGQ-RIASCGADKTLQVFKAE-TG--EKLL-------------DIKAHEDEVLCCAFSSD 668 (1249)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-TC--CEEE-------------EECCCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECC-CC--CEEE-------------EeccCCCCEEEEEEecC
Confidence 7899999995 66667789999998752 22 2211 11234567899999984
No 219
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=47.98 E-value=41 Score=34.68 Aligned_cols=61 Identities=15% Similarity=0.189 Sum_probs=38.7
Q ss_pred EEEEEecCceeeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 206 CLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 206 ~le~va~Gl~~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
.+..+..|-.++|+++|||. +||++.+ +.|.+++. +.+.-+.++ .+ ..-..+..+|+|+|+
T Consensus 298 ~v~~i~~~~p~~ia~spdg~-~l~v~n~-~~v~v~D~-~t~~l~~~~------------~i-~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 298 RVARIPGRDALSMTIDQQRN-LMLTLDG-GNVNVYDI-SQPEPKLLR------------TI-EGAAEASLQVQFHPV 358 (361)
T ss_dssp EEEEEECTTCCEEEEETTTT-EEEEECS-SCEEEEEC-SSSSCEEEE------------EE-TTSCSSEEEEEECCC
T ss_pred EEEEEecCCeeEEEECCCCC-EEEEeCC-CeEEEEEC-CCCcceeeE------------Ee-ccCCCCcEEEEecCC
Confidence 34444433368999999997 8999998 99999863 222102221 11 122356789999995
No 220
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=47.83 E-value=1.4e+02 Score=35.35 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=21.6
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++++|||. ++.++...+.|+++++
T Consensus 382 ~~~~~SpDG~-~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 382 FAMGVDRNGK-FAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred eeeEECCCCC-EEEEECCCCeEEEEEC
Confidence 6789999995 6777778899999875
No 221
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=47.42 E-value=1.6e+02 Score=28.47 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=16.1
Q ss_pred cccceEEcCCCCeEEEEecCCC
Q 005466 372 HGGQLLFGPTDGYMYFMMGDGG 393 (695)
Q Consensus 372 ~GG~L~FGP~DG~LYi~~GDgg 393 (695)
....+.+++ ||.|||++-+|.
T Consensus 296 ~~~~~~~d~-~g~l~~gt~~G~ 316 (330)
T 3hxj_A 296 IIATPVIDE-NGTIYFGTRNGK 316 (330)
T ss_dssp CCSCCEECT-TCCEEEECTTSC
T ss_pred cccceEEcC-CCEEEEEcCCCe
Confidence 345678888 999999887764
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=47.28 E-value=53 Score=35.31 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=43.6
Q ss_pred EEEEEecCceeeEEEcCCCCceEEEEe----------eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCC-----
Q 005466 206 CLEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDT----- 270 (695)
Q Consensus 206 ~le~va~Gl~~~m~~~pDGs~RlfV~E----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~----- 270 (695)
.+.+|..|..-.|+++|||. ++||++ +.+.|.+++. + +++.+ .++....
T Consensus 71 v~~~I~vG~~P~va~spDG~-~lyVan~~~~r~~~G~~~~~VsviD~-~--t~~v~------------~~I~v~~g~r~~ 134 (386)
T 3sjl_D 71 VIGMIDGGFLPNPVVADDGS-FIAHASTVFSRIARGERTDYVEVFDP-V--TLLPT------------ADIELPDAPRFL 134 (386)
T ss_dssp EEEEEEECSSCEEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECT-T--TCCEE------------EEEEETTCCCCC
T ss_pred EEEEEECCCCCcEEECCCCC-EEEEEcccccccccCCCCCEEEEEEC-C--CCeEE------------EEEECCCccccc
Confidence 45666667664599999996 799997 3567888752 2 22221 1222221
Q ss_pred -CCceeeeeeCCCCCCCCEEEEEE
Q 005466 271 -EFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 271 -E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
....-+++|+|| ..++||+-
T Consensus 135 ~g~~P~~~a~spD---Gk~lyVan 155 (386)
T 3sjl_D 135 VGTYPWMTSLTPD---GKTLLFYQ 155 (386)
T ss_dssp BSCCGGGEEECTT---SSEEEEEE
T ss_pred cCCCCceEEEcCC---CCEEEEEE
Confidence 124678999985 45789863
No 223
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=45.43 E-value=2.6e+02 Score=28.35 Aligned_cols=26 Identities=15% Similarity=0.060 Sum_probs=21.9
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|+++|||. .++++..+|.|+++++
T Consensus 138 ~~v~~s~~~~-~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 138 ASVKWSHDGS-FLSVGLGNGLVDIYDV 163 (401)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred EEEEECCCCC-EEEEECCCCeEEEEEC
Confidence 7899999995 5777778999999875
No 224
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=44.77 E-value=1.8e+02 Score=34.56 Aligned_cols=59 Identities=14% Similarity=0.042 Sum_probs=37.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..++|+|||. .+..+..+|.|+++++. . ++.+. ...........++|+|+ .++.+.++-
T Consensus 661 ~~~~~s~~~~-~l~s~~~d~~v~vwd~~-~--~~~~~-------------~~~~~~~~v~~~~~~~~--~~~~~l~sg 719 (1249)
T 3sfz_A 661 LCCAFSSDDS-YIATCSADKKVKIWDSA-T--GKLVH-------------TYDEHSEQVNCCHFTNK--SNHLLLATG 719 (1249)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETT-T--CCEEE-------------EEECCSSCEEEEEECSS--SSCCEEEEE
T ss_pred EEEEEecCCC-EEEEEeCCCeEEEEECC-C--CceEE-------------EEcCCCCcEEEEEEecC--CCceEEEEE
Confidence 7899999995 56666778999999752 2 22221 12234566889999984 234444443
No 225
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=44.27 E-value=52 Score=32.05 Aligned_cols=53 Identities=11% Similarity=0.097 Sum_probs=34.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|||. .++++..+|.|+++++.. +.... . .............++|+|+
T Consensus 15 ~~~~~s~~~~-~l~~~~~d~~v~iw~~~~-~~~~~-~-----------~~~~~~~~~~v~~~~~~~~ 67 (342)
T 1yfq_A 15 SDIKIIPSKS-LLLITSWDGSLTVYKFDI-QAKNV-D-----------LLQSLRYKHPLLCCNFIDN 67 (342)
T ss_dssp EEEEEEGGGT-EEEEEETTSEEEEEEEET-TTTEE-E-----------EEEEEECSSCEEEEEEEES
T ss_pred EEEEEcCCCC-EEEEEcCCCeEEEEEeCC-CCccc-c-----------ceeeeecCCceEEEEECCC
Confidence 6889999985 677777899999987632 21100 0 0111234566889999985
No 226
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=44.08 E-value=1.7e+02 Score=32.52 Aligned_cols=26 Identities=31% Similarity=0.603 Sum_probs=20.4
Q ss_pred eeEEEcCCCCceEEEEee-Cc-----eEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQ-EG-----KIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq-~G-----~V~~~~~ 242 (695)
..++++|||. +++.+.. +| .||++++
T Consensus 40 ~~~~~SpdG~-~la~~~~~d~~~~~~~i~~~d~ 71 (741)
T 2ecf_A 40 MKPKVAPDGS-RVTFLRGKDSDRNQLDLWSYDI 71 (741)
T ss_dssp EEEEECTTSS-EEEEEECCSSCTTEEEEEEEET
T ss_pred CCceEecCCC-EEEEEeccCCCCcccEEEEEEC
Confidence 6789999996 5666665 77 8999875
No 227
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=43.99 E-value=2.3e+02 Score=27.42 Aligned_cols=66 Identities=12% Similarity=0.069 Sum_probs=36.4
Q ss_pred eeEEEcCCC------------CceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCC
Q 005466 216 LNMVAHPDG------------SNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 283 (695)
Q Consensus 216 ~~m~~~pDG------------s~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF 283 (695)
..+++.|++ ..++..+..+|.|+++++.. +. ....+ .....+-.....+++|+|+-
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~-~~-~~~~~----------~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS-DA-QTYVL----------ESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEET-TT-TEEEE----------EEEECCCSSCEEEEEECCCC
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC-CC-ceEEE----------EEEecCCCCceEEEEECCCC
Confidence 567788874 22455566799999987532 21 11000 01111234457899999964
Q ss_pred CCCCEEEEEEe
Q 005466 284 AKNGRFFASFN 294 (695)
Q Consensus 284 ~~Ng~~YvsYs 294 (695)
.++.+.++-+
T Consensus 217 -~~~~~las~s 226 (297)
T 2pm7_B 217 -LLRSYMASVS 226 (297)
T ss_dssp -SSSEEEEEEE
T ss_pred -CCceEEEEEE
Confidence 2345555544
No 228
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=43.99 E-value=2.3e+02 Score=27.42 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=34.2
Q ss_pred eeEEEcCC--CCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCC
Q 005466 216 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 283 (695)
Q Consensus 216 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF 283 (695)
..++++|+ |. .+.++..+|.|+++++..... . . ..+......+...++|+|+-
T Consensus 103 ~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~---~-----~------~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 103 NSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGT---T-----S------PIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSC---B-----C------CEEEECCSSCEEEEEECCCC
T ss_pred eEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCc---e-----e------eeeeecccCccceEeecCCc
Confidence 67889998 53 577777899999987532110 0 0 11223345678899999964
No 229
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=43.16 E-value=1.8e+02 Score=30.81 Aligned_cols=26 Identities=8% Similarity=0.084 Sum_probs=19.5
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEcc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIP 243 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p 243 (695)
..|+++||| +++++--+|.|+++++.
T Consensus 22 ~~~~~spdg--~~l~~~~~~~v~v~~~~ 47 (615)
T 1pgu_A 22 THLSYDPTT--NAIAYPCGKSAFVRCLD 47 (615)
T ss_dssp CCCEEETTT--TEEEEEETTEEEEEECC
T ss_pred eEEEECCCC--CEEEEecCCeEEEEECC
Confidence 678999999 45555458999998753
No 230
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=43.13 E-value=1.4e+02 Score=29.37 Aligned_cols=55 Identities=16% Similarity=0.006 Sum_probs=29.7
Q ss_pred eEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 227 RAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 227 RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
++..+..+|.|+++++...+..+.+ .....-+....+++|+|+...++.+.++-+
T Consensus 181 ~l~sgs~D~~v~lWd~~~~~~~~~~-------------~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 181 RFASGGCDNLIKLWKEEEDGQWKEE-------------QKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp BEECCBTTSBCCEEEECTTSCEEEE-------------ECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred eEEEecCCCeEEEEEeCCCCcccee-------------eecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 4555567888888875221110111 011122345789999998654455556544
No 231
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=43.09 E-value=2.3e+02 Score=27.93 Aligned_cols=59 Identities=12% Similarity=-0.003 Sum_probs=36.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFA 291 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~Yv 291 (695)
..|++.|++.+.++.+..+|.|+++++.. ++.+. ..........++++|.-....++++
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNT---LQTAD--------------VFNFEETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTT---TEEEE--------------EEECSSCEEEEEECSSCSSCCEEEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCC---Cccce--------------eccCCCceeeeEeecCCCCCcEEEE
Confidence 68899996555677777899999997532 22211 1122345678888886544444443
No 232
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=42.60 E-value=51 Score=37.56 Aligned_cols=101 Identities=20% Similarity=0.272 Sum_probs=50.6
Q ss_pred ceEEcCCCCeEEEEecCCCCCC---CccCcc-ccCCCCCeeEEEEecCCCCchhhhhhcccCCCcCCCCCCCCCCCCC--
Q 005466 375 QLLFGPTDGYMYFMMGDGGGTA---DPYNFS-QNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSG-- 448 (695)
Q Consensus 375 ~L~FGP~DG~LYi~~GDgg~~~---DP~~~a-Qn~ssl~GKILRIdvDg~p~~~~~~~~g~~g~YsIP~DNPF~~~~~-- 448 (695)
.|.+.|.||.+|+++=+++..+ .+...+ .......|.|+|+++++.... .....|..+- -..+|-.....
T Consensus 388 gi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~---a~~f~w~~~v-~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 388 WIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHA---SKTFAWDLFV-VAGNPSVHAGTPK 463 (592)
T ss_dssp EEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTT---CSEEEEEEEE-ECCCTTTSTTSGG
T ss_pred eeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccc---cceeEEEEEE-eccCccccccccc
Confidence 4778887899999975544321 121111 112346899999998762110 0111121111 11222111000
Q ss_pred -CCCeEE-EeccccceeeeecCCCCCeEEEEEccC
Q 005466 449 -LQPEIW-ALGLRNPWRCSFDSDRPSYFMCADVGQ 481 (695)
Q Consensus 449 -~~pEI~-A~GlRNP~r~sfD~~~g~~l~~~DvG~ 481 (695)
...++. .-+|.||=.++||+. | +||+.+=|.
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~-G-~LwI~eDg~ 496 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKA-G-RLWILTDGD 496 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTT-C-CEEEEECCC
T ss_pred ccccccCCCCCccCCcceEECCC-C-CEEEEecCC
Confidence 000110 124789999999997 4 488776543
No 233
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=41.78 E-value=72 Score=33.33 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=24.4
Q ss_pred EEEEecCceeeEEEcCCCCceEEEEe----------eCceEEEEE
Q 005466 207 LEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLAT 241 (695)
Q Consensus 207 le~va~Gl~~~m~~~pDGs~RlfV~E----------q~G~V~~~~ 241 (695)
+.+|..|..-.++++|||. ++||+. +.+.|.+++
T Consensus 60 ~~~i~~g~~p~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 60 LGHVNGGFLPNPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred EEEecCCCCCCeEECCCCC-EEEEEeccccccccCCCCCeEEEEE
Confidence 3455555445899999996 799996 356687776
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=40.48 E-value=69 Score=35.48 Aligned_cols=63 Identities=10% Similarity=0.004 Sum_probs=42.1
Q ss_pred eeeEEEcCCCCceEEEEee-CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCC-------------CceeeeeeC
Q 005466 215 YLNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTE-------------FGLMGMAFH 280 (695)
Q Consensus 215 ~~~m~~~pDGs~RlfV~Eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E-------------~GLLGiAfh 280 (695)
...+..+|||. +|||+.+ .|.|.++++.+.+..+.+ ..|..++. .|.-+|++.
T Consensus 323 pa~I~lS~DGr-fLYVSnrg~d~VavfdV~d~~~~~lv------------~~I~tGG~~~~~~~~~G~~~~ggPr~~~lS 389 (462)
T 2ece_A 323 VTDIDISLDDK-FLYLSLWGIGEVRQYDISNPFKPVLT------------GKVKLGGIFHRADHPAGHKLTGAPQMLEIS 389 (462)
T ss_dssp CCCEEECTTSC-EEEEEETTTTEEEEEECSSTTSCEEE------------EEEECBTTTTCBCCTTSCCCCSCCCCEEEC
T ss_pred eeEEEECCCCC-EEEEEeCCCCEEEEEEecCCCCcEEE------------EEEEeCCeeccccccccccCCCCCCEEEEc
Confidence 37788999996 7999998 689999886433322211 23333322 367899999
Q ss_pred CCCCCCCEEEEEE
Q 005466 281 PNFAKNGRFFASF 293 (695)
Q Consensus 281 PdF~~Ng~~YvsY 293 (695)
|| ..++||.-
T Consensus 390 pD---Gk~LyVaN 399 (462)
T 2ece_A 390 RD---GRRVYVTN 399 (462)
T ss_dssp TT---SSEEEEEC
T ss_pred CC---CCEEEEEc
Confidence 85 45788864
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=40.21 E-value=26 Score=36.08 Aligned_cols=60 Identities=22% Similarity=0.389 Sum_probs=37.4
Q ss_pred EEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcC---ce---eeCCCCceeeeeeCCCCCCCCEEE
Q 005466 218 MVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTD---EV---HFDTEFGLMGMAFHPNFAKNGRFF 290 (695)
Q Consensus 218 m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~---~V---~~~~E~GLLGiAfhPdF~~Ng~~Y 290 (695)
|.+. || ++|+.. +...|.+++ |+. ++.+. .+|++. .. ....+.-|-|||++|+ .++||
T Consensus 186 Le~~-dG--~lyanvw~s~~I~vID-p~T--G~V~~------~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~---~~rlf 250 (268)
T 3nok_A 186 LECA-NG--VIYANIWHSSDVLEID-PAT--GTVVG------VIDASALTRAVAGQVTNPEAVLNGIAVEPG---SGRIF 250 (268)
T ss_dssp EEEE-TT--EEEEEETTCSEEEEEC-TTT--CBEEE------EEECHHHHHHHTTTCCCTTCCEEEEEECTT---TCCEE
T ss_pred cEEe-CC--EEEEEECCCCeEEEEe-CCC--CcEEE------EEECCCCcccccccccCcCCceEEEEEcCC---CCEEE
Confidence 4555 77 899988 578888886 544 34332 133321 11 1223457899999984 67899
Q ss_pred EE
Q 005466 291 AS 292 (695)
Q Consensus 291 vs 292 (695)
|.
T Consensus 251 VT 252 (268)
T 3nok_A 251 MT 252 (268)
T ss_dssp EE
T ss_pred Ee
Confidence 94
No 236
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=40.20 E-value=3e+02 Score=27.59 Aligned_cols=59 Identities=19% Similarity=0.230 Sum_probs=34.2
Q ss_pred eeEEEcCCCC-ceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 005466 216 LNMVAHPDGS-NRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 294 (695)
Q Consensus 216 ~~m~~~pDGs-~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsYs 294 (695)
..+.++|+.. +.++.+..+|.|+++++. . ++.++ ....-+.....++|+|+ +..+++-+
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~-~--~~~~~-------------~~~~h~~~v~~v~~~p~----~~~l~s~s 259 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMR-S--GQCVQ-------------AFETHESDVNSVRYYPS----GDAFASGS 259 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETT-T--CCEEE-------------EECCCSSCEEEEEECTT----SSEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECC-C--CcEEE-------------EecCCCCCeEEEEEeCC----CCEEEEEe
Confidence 4566776432 356666789999999753 2 22221 11223456789999984 44444433
No 237
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=39.35 E-value=2.9e+02 Score=27.26 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=31.4
Q ss_pred eeEEE-----cC-CCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVA-----HP-DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~-----~p-DGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..+++ .+ ||. .|+.+..+|.|+++++.+.... ...........+-......++|+|+
T Consensus 25 ~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~---------~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQN---------GYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCS---------SBSEEEEEEECCCSSCEEEEEECSS
T ss_pred hheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcc---------cccccccchhccCCCceEEEEECCC
Confidence 67777 66 773 4555667899999875321100 0000001122234456789999983
No 238
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=39.29 E-value=2.8e+02 Score=26.96 Aligned_cols=27 Identities=4% Similarity=0.057 Sum_probs=21.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++|+|++...+..+..+|.|+++++
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 788999954446777778999999975
No 239
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=38.78 E-value=4e+02 Score=29.42 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=33.8
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|||. .++.+..+|.|+++++.. ++.+ .....-......++|+|+
T Consensus 434 ~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~---~~~~-------------~~~~~h~~~v~~~~~s~~ 483 (694)
T 3dm0_A 434 EDVVLSSDGQ-FALSGSWDGELRLWDLAA---GVST-------------RRFVGHTKDVLSVAFSLD 483 (694)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT---TEEE-------------EEEECCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECCC---Ccce-------------eEEeCCCCCEEEEEEeCC
Confidence 7899999994 566677899999998532 2211 112233456889999984
No 240
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=38.74 E-value=2.9e+02 Score=31.25 Aligned_cols=52 Identities=13% Similarity=0.219 Sum_probs=34.8
Q ss_pred eeEEEcCC--CCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pD--Gs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++++|+ |. .++++..+|.|+++++.. +.. . ..............++|+|.
T Consensus 103 ~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~-~~~--~-----------~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 103 NSVQWAPHEYGP-LLLVASSDGKVSVVEFKE-NGT--T-----------SPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEECCS-SSC--C-----------CCEEEECCSSCEEEEEECCC
T ss_pred EEEEECCCCCCC-EEEEEeCCCcEEEEEeec-CCC--c-----------ceeEeecCCCceEEEEecCc
Confidence 78899999 64 677788899999987532 210 0 01122344567899999985
No 241
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=38.15 E-value=2.6e+02 Score=26.32 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=38.4
Q ss_pred CcEEEEEecCce---eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeC
Q 005466 204 GLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 280 (695)
Q Consensus 204 G~~le~va~Gl~---~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfh 280 (695)
++.+.....|-. ..|++ |||. +++.+..+|.|+++++.. ++.+ .+....+.....++|+
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~-~l~s~~~dg~v~vw~~~~---~~~~-------------~~~~~~~~~v~~~~~~ 68 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDS-KVASVSRDGTVRLWSKDD---QWLG-------------TVVYTGQGFLNSVCYD 68 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETT-EEEEEETTSEEEEEEESS---SEEE-------------EEEEECSSCEEEEEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCC-EEEEEEcCCcEEEEECCC---CEEE-------------EEeecCCccEEEEEEC
Confidence 444444444433 67888 8885 688888899999987522 1111 1222335678899999
Q ss_pred CC
Q 005466 281 PN 282 (695)
Q Consensus 281 Pd 282 (695)
|+
T Consensus 69 ~~ 70 (313)
T 3odt_A 69 SE 70 (313)
T ss_dssp TT
T ss_pred CC
Confidence 83
No 242
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=37.95 E-value=2.7e+02 Score=28.74 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=21.0
Q ss_pred eeEEEcCC---CCceEEEEeeCceEEEEEcc
Q 005466 216 LNMVAHPD---GSNRAFFSNQEGKIWLATIP 243 (695)
Q Consensus 216 ~~m~~~pD---Gs~RlfV~Eq~G~V~~~~~p 243 (695)
..|+++|| |. .++.+..+|.|+++++.
T Consensus 199 ~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 199 TDVHLIKDSDGHQ-FIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEEEECTTSCE-EEEEEETTSCEEEEEES
T ss_pred EEEEEcCCCCCCc-EEEEEcCCCcEEEEECC
Confidence 67899999 62 56667789999999863
No 243
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=36.99 E-value=3.4e+02 Score=27.27 Aligned_cols=57 Identities=25% Similarity=0.378 Sum_probs=33.2
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..+++.|+| ++++....|.|+.-+ +.| ++..+ .+.......+..++++| ++.+|+..
T Consensus 166 ~~~~~~~~~--~~~~~g~~G~~~~S~--d~g-G~tW~------------~~~~~~~~~~~~~~~~~----~g~~~~~~ 222 (327)
T 2xbg_A 166 RNLNRSPSG--EYVAVSSRGSFYSTW--EPG-QTAWE------------PHNRTTSRRLHNMGFTP----DGRLWMIV 222 (327)
T ss_dssp EEEEECTTS--CEEEEETTSSEEEEE--CTT-CSSCE------------EEECCSSSCEEEEEECT----TSCEEEEE
T ss_pred EEEEEcCCC--cEEEEECCCcEEEEe--CCC-CCcee------------ECCCCCCCccceeEECC----CCCEEEEe
Confidence 567778877 677777788887653 221 22111 11112345778888876 46677643
No 244
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=36.29 E-value=1e+02 Score=31.30 Aligned_cols=26 Identities=12% Similarity=0.226 Sum_probs=22.3
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..++|+|||. .++.+.++|.|++++.
T Consensus 70 ~~~~~sp~~~-~l~s~s~D~~v~iWd~ 95 (380)
T 3iz6_a 70 YSLDWTPEKN-WIVSASQDGRLIVWNA 95 (380)
T ss_dssp EEEEECTTSS-CEEEEETTSEEEEEET
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEEC
Confidence 7899999995 6777788999999974
No 245
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=35.66 E-value=1.2e+02 Score=29.49 Aligned_cols=69 Identities=13% Similarity=0.075 Sum_probs=40.0
Q ss_pred EEEEecCce---eeEEEcCCCCceEEEEe-e---CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeee
Q 005466 207 LEKIGNGSY---LNMVAHPDGSNRAFFSN-Q---EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAF 279 (695)
Q Consensus 207 le~va~Gl~---~~m~~~pDGs~RlfV~E-q---~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAf 279 (695)
++.+..|.. ..|+|+|||. +++++. . +|.|+++++.. + +... ............++|
T Consensus 10 ~~~~~~~h~~~v~~~~~~p~~~-~l~~~~s~~~~d~~v~iw~~~~-~--~~~~------------~~~~~~~~~v~~~~~ 73 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVPCSA-KFVTMGNFARGTGVIQLYEIQH-G--DLKL------------LREIEKAKPIKCGTF 73 (357)
T ss_dssp EEEEEEECSSCEEEEEECTTSS-EEEEEEC--CCCEEEEEEEECS-S--SEEE------------EEEEEESSCEEEEEC
T ss_pred hhhhccCCCCceEEEEEcCCCc-eEEEecCccCCCcEEEEEeCCC-C--cccc------------eeeecccCcEEEEEE
Confidence 344444433 8899999996 455554 3 89999987532 2 1110 111234567899999
Q ss_pred CCCCCCCCEEEE
Q 005466 280 HPNFAKNGRFFA 291 (695)
Q Consensus 280 hPdF~~Ng~~Yv 291 (695)
+|+-.+..++++
T Consensus 74 ~~~~~~~~~l~~ 85 (357)
T 3i2n_A 74 GATSLQQRYLAT 85 (357)
T ss_dssp TTCCTTTCCEEE
T ss_pred cCCCCCCceEEE
Confidence 996432344443
No 246
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=34.99 E-value=3e+02 Score=32.32 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=21.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
+.++|+|||. .|-++..+|.|+++++
T Consensus 492 ~svafspdg~-~LAsgs~DgtV~lwd~ 517 (902)
T 2oaj_A 492 DKISFAAETL-ELAVSIETGDVVLFKY 517 (902)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEEE
T ss_pred eEEEecCCCC-eEEEEecCcEEEEEEe
Confidence 7899999995 5666778999999876
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=34.82 E-value=68 Score=33.96 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=37.9
Q ss_pred EEEEEecCce-eeEEEcCCCCceEEEEee--CceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 206 CLEKIGNGSY-LNMVAHPDGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 206 ~le~va~Gl~-~~m~~~pDGs~RlfV~Eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
.+.+|..|-. ++|+++|||. ++||+.+ .+.|.+++. .+++.++ .+ .-.++-.+|++|++
T Consensus 306 vv~~i~vg~~p~gi~~s~Dg~-~l~va~~~~~~~VsVID~---~t~kvv~------------~I--~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 306 TSGPISNGHDSDAIIAAQDGA-SDNYANSAGTEVLDIYDA---ASDQDQS------------SV--ELDKGPESLSVQNE 367 (368)
T ss_dssp EEECCEEEEEECEEEECCSSS-CEEEEEETTTTEEEEEES---SSCEEEE------------EC--CCCSCCCEEECCCC
T ss_pred EEEEEECCCCcceEEECCCCC-EEEEEccCCCCeEEEEEC---CCCcEEE------------EE--ECCCCCCEEEeecC
Confidence 3445554545 9999999996 5777776 799999874 2233221 12 12356778888864
No 248
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=34.65 E-value=56 Score=35.47 Aligned_cols=26 Identities=4% Similarity=-0.146 Sum_probs=21.3
Q ss_pred eeEEEcCCCCceEEEEeeCc--eEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEG--KIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G--~V~~~~~ 242 (695)
..++|+|||. +|+..++.| .||++++
T Consensus 198 ~~~~~SpDG~-~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 198 SSASISPGMK-VTAGLETAREARLVTVDP 225 (582)
T ss_dssp EEEEECTTSC-EEEEEECSSCEEEEEECT
T ss_pred ccceECCCCC-EEEEccCCCeeEEEEEcC
Confidence 7899999996 677777888 8888864
No 249
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=33.24 E-value=2.8e+02 Score=29.73 Aligned_cols=32 Identities=9% Similarity=0.316 Sum_probs=21.8
Q ss_pred ccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCC
Q 005466 371 HHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 419 (695)
Q Consensus 371 H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg 419 (695)
-.|..+.+++.+|.||++.=+ ..+|.+.++++
T Consensus 275 s~~~~~~~D~~~G~ly~~~~~-----------------~~aI~~w~~~~ 306 (381)
T 3q6k_A 275 NDAIALAYDPKTKVIFFAEAN-----------------TKQVSCWNTQK 306 (381)
T ss_dssp CCEEEEEECTTTCEEEEEESS-----------------SSEEEEEETTS
T ss_pred CCcceEEEeCCCCeEEEEecc-----------------CCeEEEEeCCC
Confidence 345567786338999997622 45688888765
No 250
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=32.47 E-value=3e+02 Score=32.26 Aligned_cols=26 Identities=4% Similarity=-0.009 Sum_probs=21.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..|+|+|||. .|.++..+|.|++++.
T Consensus 21 ~~lafspdg~-~lAsgs~Dg~I~lw~~ 46 (902)
T 2oaj_A 21 IAAAFDFTQN-LLAIATVTGEVHIYGQ 46 (902)
T ss_dssp EEEEEETTTT-EEEEEETTSEEEEECS
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeC
Confidence 7899999994 5666677999999863
No 251
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=30.32 E-value=1.8e+02 Score=33.07 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=30.8
Q ss_pred CCCCCccccceEEcCCCCeEEEEecCCCCCCCccCccccCCCCCeeEEEEecCC
Q 005466 366 LSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 419 (695)
Q Consensus 366 ~P~~~H~GG~L~FGP~DG~LYi~~GDgg~~~DP~~~aQn~ssl~GKILRIdvDg 419 (695)
++...-+.+.+...+ ||.||+++-+|-..-||-....+.....=.|-+|.+++
T Consensus 623 l~~~~f~~~~~~~~~-~G~l~~g~~~Gl~~f~p~~~~~~~~~~~v~it~~~v~~ 675 (781)
T 3v9f_A 623 IPQGSFISGCVTKDH-NGLIYFGSINGLCFFNPDIAINSPQIPPVVITKVRIPG 675 (781)
T ss_dssp CCSSCEEEEEEEECT-TSCEEEEETTEEEEECSCCGGGSSCCCCCEEEEEECCC
T ss_pred ccccccccCceEECC-CCEEEEECCCceEEEChhhccccCCCCCEEEEEEEECC
Confidence 444333445677888 99999999887544455333233333333445666665
No 252
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=29.93 E-value=1.9e+02 Score=29.69 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=42.1
Q ss_pred CcEEEEEecCce-eeEEEcCCCCceEEEEe--eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeC
Q 005466 204 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSN--QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 280 (695)
Q Consensus 204 G~~le~va~Gl~-~~m~~~pDGs~RlfV~E--q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfh 280 (695)
|-++..+..+.. ..+++.|++. .++++. .+|.|++++.+. ++.+. ...+-+...++++|+
T Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~d~~I~iwd~~~---~~~v~-------------~l~gH~~~V~~l~~s 373 (420)
T 4gga_A 311 GACLSAVDAHSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYPT---MAKVA-------------ELKGHTSRVLSLTMS 373 (420)
T ss_dssp TEEEEEEECSSCEEEEEEETTTT-EEEEEECTTTCCEEEEETTT---CCEEE-------------EECCCSSCEEEEEEC
T ss_pred cccceeeccccceeeeeecCCCC-eEEEEEecCCCEEEEEECCC---CcEEE-------------EEcCCCCCEEEEEEc
Confidence 344455554444 7889999985 455554 579999987642 22221 111224568999999
Q ss_pred CCCCCCCEEEEEEe
Q 005466 281 PNFAKNGRFFASFN 294 (695)
Q Consensus 281 PdF~~Ng~~YvsYs 294 (695)
|+ |.+.++-+
T Consensus 374 pd----g~~l~S~s 383 (420)
T 4gga_A 374 PD----GATVASAA 383 (420)
T ss_dssp TT----SSCEEEEE
T ss_pred CC----CCEEEEEe
Confidence 84 55555544
No 253
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=29.15 E-value=2.3e+02 Score=31.98 Aligned_cols=26 Identities=15% Similarity=0.214 Sum_probs=18.1
Q ss_pred eeEEEcCCCCceE-EEEeeCc----eEEEEEc
Q 005466 216 LNMVAHPDGSNRA-FFSNQEG----KIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~Rl-fV~Eq~G----~V~~~~~ 242 (695)
..++++|||. +| |..++.| .||++++
T Consensus 166 ~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl 196 (741)
T 1yr2_A 166 DAWAASDDGR-LLAYSVQDGGSDWRTVKFVGV 196 (741)
T ss_dssp EEEEECTTSS-EEEEEEEETTCSEEEEEEEET
T ss_pred EeEEECCCCC-EEEEEEcCCCCceEEEEEEEC
Confidence 5789999996 44 4445555 4888875
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=26.96 E-value=1.2e+02 Score=30.52 Aligned_cols=63 Identities=19% Similarity=0.280 Sum_probs=36.3
Q ss_pred EEEcCCCCceEEEEe-eCceEEEEEccCCCCCceeeecCCCCCcCCcCcee---eCCCCceeeeeeCCCCCCCCEEEEE
Q 005466 218 MVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVH---FDTEFGLMGMAFHPNFAKNGRFFAS 292 (695)
Q Consensus 218 m~~~pDGs~RlfV~E-q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~---~~~E~GLLGiAfhPdF~~Ng~~Yvs 292 (695)
|.+. || ++|+.. +...|.+++ |+. ++.+.. ..+-.+.+... ...+.-|-|||+||+ +++|||.
T Consensus 155 Le~~-~G--~lyanvw~s~~I~vID-p~t--G~V~~~---idl~~l~~~~~~~~~~~~~vlNGIA~d~~---~~~lfVT 221 (243)
T 3mbr_X 155 LEWV-NG--ELLANVWLTSRIARID-PAS--GKVVAW---IDLQALVPDADALTDSTNDVLNGIAFDAE---HDRLFVT 221 (243)
T ss_dssp EEEE-TT--EEEEEETTTTEEEEEC-TTT--CBEEEE---EECGGGSTTTTSCCCTTSSCEEEEEEETT---TTEEEEE
T ss_pred eEEe-CC--EEEEEECCCCeEEEEE-CCC--CCEEEE---EECCcCccccccccCCcCCceEEEEEcCC---CCEEEEE
Confidence 4433 66 899888 577888876 544 343321 11111211111 123457899999984 6789995
No 255
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=26.19 E-value=1.6e+02 Score=32.62 Aligned_cols=26 Identities=12% Similarity=0.278 Sum_probs=19.2
Q ss_pred eeEEEcCCCCceEEEEee---------CceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQ---------EGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq---------~G~V~~~~~ 242 (695)
..++++|||. +|.++.. .+.||++++
T Consensus 63 ~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 63 SNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp SEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEET
T ss_pred eeEEECCCCC-eEEEEecCceeEEeecceEEEEEEC
Confidence 6789999995 4555443 589999875
No 256
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=25.27 E-value=7.5e+02 Score=27.62 Aligned_cols=10 Identities=20% Similarity=0.398 Sum_probs=8.4
Q ss_pred eeEEEcCCCC
Q 005466 216 LNMVAHPDGS 225 (695)
Q Consensus 216 ~~m~~~pDGs 225 (695)
.+++|+|||.
T Consensus 174 ~~~~wSpDg~ 183 (740)
T 4a5s_A 174 SALWWSPNGT 183 (740)
T ss_dssp BCEEECTTSS
T ss_pred cceEECCCCC
Confidence 4689999996
No 257
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=24.86 E-value=8e+02 Score=28.75 Aligned_cols=25 Identities=8% Similarity=0.170 Sum_probs=16.2
Q ss_pred ccceEEEcCCCcEEEEe-CCeEEEEe
Q 005466 616 YIYSFGEDNRKDIFILT-SDGVYRVV 640 (695)
Q Consensus 616 ri~sf~ed~dGeLYvlt-s~gIYRIv 640 (695)
.+.++...+||...+.. .++|+.+-
T Consensus 609 ~v~~~~~S~DG~~l~~~~~~~i~~~d 634 (1045)
T 1k32_A 609 NLTDLRLSADRKTVMVRKDDGKIYTF 634 (1045)
T ss_dssp EEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CcceEEECCCCCEEEEEcCCcEEEEe
Confidence 46688999999855544 44444443
No 258
>3gkj_A Niemann-PICK C1 protein; oxysterol, cholesterol, cholesterol transfer, disease mutati endosome, glycoprotein, lysosome, membrane, transmembrane; HET: NAG HC3; 1.60A {Homo sapiens} PDB: 3gkh_A* 3gki_A*
Probab=24.42 E-value=15 Score=37.21 Aligned_cols=109 Identities=17% Similarity=0.326 Sum_probs=70.1
Q ss_pred CCCCCCCCcCCCccc-----ccCC--CC--CCCcCCcccchHHHHHhHHhh---cCCcchhhHhhhcccc-ccccccccc
Q 005466 26 LCTDSRAPITLNTTL-----SFCP--YN--GKTCCNATGDSQLQKQFQAMN---ISDSGCSSLLKSILCA-KCDQFAGEL 92 (695)
Q Consensus 26 ~c~d~~~p~~~~~~l-----~fc~--y~--~~~cc~~~~d~~~~~~~~~~~---~~~~~c~~~~~~ilc~-~c~p~a~~l 92 (695)
-|.+..||..++... +.|+ +. +..||+..+-..|+++++... .+=..|..=++.+.|+ .|||.= .+
T Consensus 21 ~C~~~~~a~~~~~~~~~~L~~~Cp~~~~~~~~~CC~~~Ql~~L~~nl~~a~~il~rCPaC~~Nf~~l~C~~TCSP~Q-S~ 99 (232)
T 3gkj_A 21 NCEYSGPPKPLPKDGYDLVQELCPGFFFGQVSLCCDVRQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQ-SQ 99 (232)
T ss_dssp EEECCSCCEECCGGGHHHHHHHCGGGCSTTCEESCCHHHHHHHHHTTHHHHHHHTTCHHHHHHHHHHHHHHHHCTTH-HH
T ss_pred cCCCCCcCCCCCHHHHHHHHHhChHhhcCCCCCCCCHHHHHHHHHHHHHHHHhcCcChHHHHHHHHHhcCCCCCCcc-cc
Confidence 388889888777442 7896 43 447999999999999887753 2567799999999998 699994 34
Q ss_pred cccCCCCcCcccccCCCCCCCC--cC--cccccccchHHHHhcccCcccc
Q 005466 93 FTAGSVVRPVPLLCNSTGSNSS--QS--SKATITDFCSEVWDTCQNVSVR 138 (695)
Q Consensus 93 ~~~~~~~~~~p~lc~~~~~~~~--~~--~~~~~~~yc~~~~~~c~~~~~~ 138 (695)
|=.-+.....+. ..+. ... .. .-....+|=..+|+.|++|..+
T Consensus 100 Fl~vt~t~~~~d--~~~~-~~~~~V~ev~y~v~~~fa~~~YdSCkdV~~p 146 (232)
T 3gkj_A 100 FLQVTATEDYVD--PVTN-QTKTNVKELQYYVGQSFANAMYNACRDVEAP 146 (232)
T ss_dssp HEEEEEEEEEEC--TTTC-CEEEEEEEEEEEECHHHHHHHHHHHTTCBCT
T ss_pred ceeeEecccccc--cccc-CCcceEEEEEEEECHHHHHHHhhhhhCcccc
Confidence 432221111000 0000 000 00 0115678999999999998753
No 259
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=22.93 E-value=2.3e+02 Score=27.78 Aligned_cols=55 Identities=11% Similarity=0.128 Sum_probs=33.2
Q ss_pred eeEEEcCCC---CceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCC
Q 005466 216 LNMVAHPDG---SNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 282 (695)
Q Consensus 216 ~~m~~~pDG---s~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPd 282 (695)
..++|+||+ .+.|..+..+|.|+++++.+ ...... . ..+...-+.....++|+|+
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~-~~~~~~-----~------~~~~~~~~~~v~~v~~sp~ 273 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD-ASSNTW-----S------PKLLHKFNDVVWHVSWSIT 273 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEECSS-TTCCCC-----B------CCEEEECSSCEEEEEECTT
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEccC-ccccch-----h------hhhhhcCCCcEEEEEEcCC
Confidence 688999997 23566677899999987532 110000 0 0111122456789999984
No 260
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=22.83 E-value=2.3e+02 Score=30.15 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=19.1
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
-+|+..+. +++|||+|++-.||.++.
T Consensus 183 EgcvvDd~-~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 183 EGMAADDE-YGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp EEEEEETT-TTEEEEEETTTEEEEEEC
T ss_pred ceEEEcCC-CCeEEEecccceEEEEeC
Confidence 45666654 459999999755999874
No 261
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=22.49 E-value=5.3e+02 Score=24.91 Aligned_cols=27 Identities=33% Similarity=0.601 Sum_probs=17.1
Q ss_pred eeEEEcCCCCceEEEEeeC--c--eEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQE--G--KIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~--G--~V~~~~~ 242 (695)
..++++|||..=+|+.++. | .||++++
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~ 92 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADL 92 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEET
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEEC
Confidence 5789999996323444443 4 4887764
No 262
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=21.90 E-value=1.6e+02 Score=30.48 Aligned_cols=61 Identities=10% Similarity=0.119 Sum_probs=35.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..|+|+|++.+.+..+..+|.|+++++.. +.. ...++. ...-......++|+| +|...++-
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~-~~~-------~~~~~~-----~~~h~~~v~~~~~sp----dg~~l~s~ 314 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQ-VRG-------KASFLY-----SLPHRHPVNAACFSP----DGARLLTT 314 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTT-CCS-------SSCCSB-----CCBCSSCEEECCBCT----TSSEEEEE
T ss_pred EeeeecCCCceEEEEecCcceeeEEeccc-ccc-------cceEEE-----eeeccccccceeECC----CCCeeEEE
Confidence 67899999964344556789999887532 211 111111 112345678999998 45444443
No 263
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=21.60 E-value=4.3e+02 Score=24.85 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=35.6
Q ss_pred eeEEEcCCCCceEEEEe--eCceEEEEEccCCCCCceeeecCCCCCcCCcCceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 005466 216 LNMVAHPDGSNRAFFSN--QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 293 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~E--q~G~V~~~~~p~~gsg~~l~~~~~~pflDl~~~V~~~~E~GLLGiAfhPdF~~Ng~~YvsY 293 (695)
..+.+.|++. .++++. .+|.|+++++.. ++.+. ...+-+....+++|+| +|.+.++-
T Consensus 244 ~~~~~~~~~~-~~~~~sg~~d~~i~iwd~~~---~~~~~-------------~l~gH~~~V~~l~~sp----dg~~l~S~ 302 (318)
T 4ggc_A 244 CSILWSPHYK-ELISGHGFAQNQLVIWKYPT---MAKVA-------------ELKGHTSRVLSLTMSP----DGATVASA 302 (318)
T ss_dssp EEEEEETTTT-EEEEEECTTTCCEEEEETTT---CCEEE-------------EECCCSSCEEEEEECT----TSSCEEEE
T ss_pred eeeeeccccc-ceEEEEEcCCCEEEEEECCC---CcEEE-------------EEcCCCCCEEEEEEcC----CCCEEEEE
Confidence 6788889885 455544 689999987532 22221 1112245688999998 45555544
Q ss_pred e
Q 005466 294 N 294 (695)
Q Consensus 294 s 294 (695)
+
T Consensus 303 s 303 (318)
T 4ggc_A 303 A 303 (318)
T ss_dssp E
T ss_pred e
Confidence 4
No 264
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=21.01 E-value=6.6e+02 Score=25.47 Aligned_cols=26 Identities=8% Similarity=0.166 Sum_probs=21.7
Q ss_pred eeEEEcCCCCceEEEEeeCceEEEEEc
Q 005466 216 LNMVAHPDGSNRAFFSNQEGKIWLATI 242 (695)
Q Consensus 216 ~~m~~~pDGs~RlfV~Eq~G~V~~~~~ 242 (695)
..+++.|||. .++++..+|.|+++++
T Consensus 314 ~~~~~~~~~~-~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 314 YSTIYDHERK-RCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEET
T ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEEC
Confidence 6789999985 6777778999999875
Done!