Query 005473
Match_columns 695
No_of_seqs 570 out of 3092
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 02:25:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005473.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005473hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 99.9 9E-26 3.1E-30 242.4 27.5 168 506-695 139-310 (344)
2 3ow8_A WD repeat-containing pr 99.9 1.3E-25 4.6E-30 237.9 28.1 199 475-695 95-301 (321)
3 4gqb_B Methylosome protein 50; 99.9 1.5E-25 5E-30 240.8 28.0 172 507-695 94-268 (344)
4 1vyh_C Platelet-activating fac 99.9 1.2E-25 4.2E-30 246.0 27.4 183 476-695 105-287 (410)
5 2ynn_A Coatomer subunit beta'; 99.9 2.5E-25 8.6E-30 233.0 27.0 183 477-694 11-194 (304)
6 3frx_A Guanine nucleotide-bind 99.9 4.9E-25 1.7E-29 232.7 28.2 189 476-695 14-207 (319)
7 2ynn_A Coatomer subunit beta'; 99.9 6.9E-25 2.4E-29 229.7 29.0 170 505-695 66-239 (304)
8 1got_B GT-beta; complex (GTP-b 99.9 1.2E-24 4E-29 231.6 29.6 185 505-695 108-323 (340)
9 2pm7_B Protein transport prote 99.9 9.1E-25 3.1E-29 228.0 26.8 187 476-695 6-215 (297)
10 1vyh_C Platelet-activating fac 99.9 9.2E-25 3.2E-29 239.1 28.1 180 479-695 192-391 (410)
11 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.4E-24 4.6E-29 231.8 27.3 182 481-695 18-205 (345)
12 2hes_X YDR267CP; beta-propelle 99.9 1.6E-24 5.6E-29 229.7 26.3 190 478-695 57-261 (330)
13 4ery_A WD repeat-containing pr 99.9 6.1E-24 2.1E-28 221.7 30.1 183 476-695 20-203 (312)
14 2hes_X YDR267CP; beta-propelle 99.9 3.8E-24 1.3E-28 227.0 28.9 170 507-695 25-208 (330)
15 3ow8_A WD repeat-containing pr 99.9 2.5E-24 8.4E-29 228.2 27.0 170 504-695 90-259 (321)
16 1got_B GT-beta; complex (GTP-b 99.9 4.4E-24 1.5E-28 227.1 28.1 182 476-695 52-237 (340)
17 2pbi_B Guanine nucleotide-bind 99.9 7.8E-24 2.7E-28 227.2 29.3 167 507-695 167-337 (354)
18 3frx_A Guanine nucleotide-bind 99.9 1.3E-23 4.4E-28 221.8 29.6 169 503-695 74-248 (319)
19 3f3f_A Nucleoporin SEH1; struc 99.9 1.1E-23 3.7E-28 218.2 28.4 191 474-695 6-317 (351)
20 2xzm_R RACK1; ribosome, transl 99.9 1.8E-23 6.2E-28 222.4 29.9 194 477-695 19-224 (343)
21 3fm0_A Protein CIAO1; WDR39,SG 99.9 9.5E-24 3.3E-28 225.3 26.8 170 507-695 74-263 (345)
22 4g56_B MGC81050 protein; prote 99.9 6.9E-24 2.4E-28 228.0 24.2 180 478-694 138-321 (357)
23 2pbi_B Guanine nucleotide-bind 99.9 2.3E-23 7.8E-28 223.5 27.6 184 476-695 61-251 (354)
24 1nr0_A Actin interacting prote 99.9 3E-23 1E-27 238.9 29.4 195 478-695 58-335 (611)
25 4g56_B MGC81050 protein; prote 99.9 1.3E-23 4.6E-28 225.8 23.3 144 550-695 134-280 (357)
26 3dm0_A Maltose-binding peripla 99.9 3.1E-23 1.1E-27 241.8 27.6 188 477-695 380-572 (694)
27 3bg1_A Protein SEC13 homolog; 99.9 3.4E-24 1.2E-28 225.9 17.7 187 476-695 10-223 (316)
28 4ery_A WD repeat-containing pr 99.9 1.4E-22 4.6E-27 211.4 28.9 155 506-680 77-231 (312)
29 3iz6_a 40S ribosomal protein R 99.9 3.7E-23 1.3E-27 223.7 25.1 203 476-695 63-309 (380)
30 3iz6_a 40S ribosomal protein R 99.9 6.3E-23 2.1E-27 221.8 26.8 216 474-695 80-355 (380)
31 1erj_A Transcriptional repress 99.9 1.7E-22 5.6E-27 219.5 29.2 177 481-695 125-321 (393)
32 3mmy_A MRNA export factor; mRN 99.9 1.3E-22 4.5E-27 213.1 27.5 190 474-695 34-326 (368)
33 1nr0_A Actin interacting prote 99.9 8.5E-23 2.9E-27 235.1 28.0 183 478-695 146-378 (611)
34 4e54_B DNA damage-binding prot 99.9 1.1E-23 3.8E-28 231.6 19.5 184 478-695 118-307 (435)
35 1erj_A Transcriptional repress 99.9 2.9E-22 1E-26 217.5 29.2 167 506-694 177-362 (393)
36 2xzm_R RACK1; ribosome, transl 99.9 2.3E-22 7.9E-27 213.8 27.8 165 506-695 88-266 (343)
37 3dwl_C Actin-related protein 2 99.9 8.7E-24 3E-28 225.5 16.7 182 479-695 11-216 (377)
38 2pm7_B Protein transport prote 99.9 1.6E-22 5.5E-27 211.0 25.9 172 506-695 67-265 (297)
39 3jrp_A Fusion protein of prote 99.9 2.6E-22 8.8E-27 212.1 27.3 186 476-695 8-217 (379)
40 4aow_A Guanine nucleotide-bind 99.9 6.8E-22 2.3E-26 206.4 28.4 191 476-695 35-226 (340)
41 3dwl_C Actin-related protein 2 99.9 2.2E-23 7.6E-28 222.3 17.3 184 478-695 54-262 (377)
42 2ymu_A WD-40 repeat protein; u 99.9 3.6E-22 1.2E-26 225.3 28.0 166 504-695 395-560 (577)
43 2xyi_A Probable histone-bindin 99.9 4.5E-22 1.5E-26 218.7 27.2 191 478-695 180-389 (430)
44 3dw8_B Serine/threonine-protei 99.9 1.9E-22 6.4E-27 219.6 22.7 193 478-695 27-296 (447)
45 3vl1_A 26S proteasome regulato 99.9 3.2E-22 1.1E-26 216.2 23.3 170 504-695 107-301 (420)
46 3zwl_B Eukaryotic translation 99.9 1.9E-21 6.5E-26 204.3 28.5 184 475-695 28-229 (369)
47 3dm0_A Maltose-binding peripla 99.9 7.9E-22 2.7E-26 230.0 27.4 167 506-695 442-613 (694)
48 1k8k_C P40, ARP2/3 complex 41 99.9 1.5E-21 5.1E-26 206.4 26.9 184 478-695 7-213 (372)
49 3ei3_B DNA damage-binding prot 99.9 1.4E-21 4.7E-26 209.5 26.9 181 478-694 72-260 (383)
50 2aq5_A Coronin-1A; WD40 repeat 99.9 3.2E-22 1.1E-26 216.7 21.6 171 507-695 48-231 (402)
51 3vl1_A 26S proteasome regulato 99.9 5.9E-22 2E-26 214.1 23.2 168 507-694 152-345 (420)
52 2j04_B YDR362CP, TAU91; beta p 99.9 2.4E-22 8.3E-27 228.4 21.1 195 480-695 208-408 (524)
53 1k8k_C P40, ARP2/3 complex 41 99.9 2E-21 6.7E-26 205.5 26.3 170 507-695 65-255 (372)
54 2aq5_A Coronin-1A; WD40 repeat 99.9 1.8E-21 6.2E-26 210.8 25.7 174 507-695 95-278 (402)
55 1gxr_A ESG1, transducin-like e 99.9 6.4E-21 2.2E-25 198.0 28.7 183 477-695 49-235 (337)
56 3bg1_A Protein SEC13 homolog; 99.9 2.6E-22 9E-27 211.4 18.2 172 506-695 71-273 (316)
57 2xyi_A Probable histone-bindin 99.9 1.1E-21 3.9E-26 215.5 23.8 194 478-695 127-332 (430)
58 4h5i_A Guanine nucleotide-exch 99.9 2E-21 7E-26 209.5 25.2 178 481-695 135-323 (365)
59 4aez_A CDC20, WD repeat-contai 99.9 5.7E-21 2E-25 207.3 28.2 166 506-695 146-314 (401)
60 3k26_A Polycomb protein EED; W 99.9 1.5E-21 5E-26 205.3 22.7 184 480-695 70-346 (366)
61 1sq9_A Antiviral protein SKI8; 99.9 4.5E-21 1.5E-25 205.3 25.4 177 507-695 138-365 (397)
62 2pm9_A Protein WEB1, protein t 99.9 1.1E-21 3.7E-26 211.2 20.4 177 507-695 127-316 (416)
63 1r5m_A SIR4-interacting protei 99.9 3.4E-21 1.2E-25 206.4 24.1 145 547-695 239-405 (425)
64 3jrp_A Fusion protein of prote 99.9 8.9E-21 3E-25 200.3 27.0 172 506-695 69-267 (379)
65 2ymu_A WD-40 repeat protein; u 99.9 9.5E-21 3.2E-25 213.6 28.5 166 504-695 354-519 (577)
66 4gq1_A NUP37; propeller, trans 99.9 1.1E-21 3.6E-26 213.6 19.8 175 506-695 101-370 (393)
67 1r5m_A SIR4-interacting protei 99.9 1.6E-20 5.4E-25 201.2 28.6 177 480-695 109-341 (425)
68 4aez_A CDC20, WD repeat-contai 99.9 7.9E-21 2.7E-25 206.2 25.7 166 507-695 104-270 (401)
69 1gxr_A ESG1, transducin-like e 99.9 3.2E-20 1.1E-24 192.8 29.2 167 507-695 110-276 (337)
70 3mkq_A Coatomer beta'-subunit; 99.9 5.3E-21 1.8E-25 224.7 25.8 183 477-694 11-194 (814)
71 3lrv_A PRE-mRNA-splicing facto 99.9 3.7E-21 1.2E-25 204.3 22.0 210 472-695 48-271 (343)
72 3f3f_A Nucleoporin SEH1; struc 99.9 1.3E-20 4.6E-25 194.9 24.6 163 506-679 71-344 (351)
73 3odt_A Protein DOA1; ubiquitin 99.9 3.7E-20 1.3E-24 190.5 27.8 178 506-695 71-277 (313)
74 3v7d_B Cell division control p 99.9 2.6E-20 8.8E-25 204.8 28.1 166 507-694 133-362 (464)
75 3k26_A Polycomb protein EED; W 99.9 4E-21 1.4E-25 201.9 20.8 191 474-694 13-241 (366)
76 3ei3_B DNA damage-binding prot 99.9 1.8E-20 6.2E-25 200.7 25.5 157 507-683 132-293 (383)
77 3jro_A Fusion protein of prote 99.9 8.9E-21 3E-25 224.1 24.9 186 476-695 6-215 (753)
78 3zwl_B Eukaryotic translation 99.9 5E-20 1.7E-24 193.4 27.3 144 548-695 166-326 (369)
79 3gre_A Serine/threonine-protei 99.9 1.5E-20 5.1E-25 205.0 24.1 187 476-694 60-267 (437)
80 2pm9_A Protein WEB1, protein t 99.9 4.9E-21 1.7E-25 206.0 19.8 185 478-694 66-272 (416)
81 4aow_A Guanine nucleotide-bind 99.9 8.2E-20 2.8E-24 190.6 28.6 183 506-695 98-317 (340)
82 1sq9_A Antiviral protein SKI8; 99.9 8E-21 2.7E-25 203.3 21.3 186 476-695 13-244 (397)
83 4gga_A P55CDC, cell division c 99.9 7.5E-20 2.6E-24 199.9 28.9 188 503-695 156-375 (420)
84 3i2n_A WD repeat-containing pr 99.9 1.5E-20 5.2E-25 197.1 22.6 183 477-694 16-219 (357)
85 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.6E-20 5.5E-25 207.1 23.6 182 479-695 102-318 (450)
86 4a11_B DNA excision repair pro 99.9 8.9E-20 3E-24 194.6 28.6 190 477-695 41-256 (408)
87 3odt_A Protein DOA1; ubiquitin 99.9 5.5E-20 1.9E-24 189.3 25.4 194 476-695 15-236 (313)
88 3sfz_A APAF-1, apoptotic pepti 99.9 4.2E-20 1.4E-24 228.1 28.5 167 477-679 613-781 (1249)
89 3gre_A Serine/threonine-protei 99.9 7.3E-21 2.5E-25 207.5 19.0 133 546-681 203-368 (437)
90 2j04_B YDR362CP, TAU91; beta p 99.9 4E-21 1.4E-25 218.4 17.1 172 507-695 174-366 (524)
91 3mkq_A Coatomer beta'-subunit; 99.9 4.7E-20 1.6E-24 216.7 26.7 182 478-695 54-239 (814)
92 3i2n_A WD repeat-containing pr 99.9 2.6E-20 8.7E-25 195.4 21.5 171 505-695 128-332 (357)
93 4a11_B DNA excision repair pro 99.9 1.5E-19 5.1E-24 192.8 27.5 182 478-695 98-345 (408)
94 2oaj_A Protein SNI1; WD40 repe 99.8 6.1E-20 2.1E-24 221.5 27.0 181 476-695 14-222 (902)
95 4e54_B DNA damage-binding prot 99.8 1.1E-20 3.9E-25 207.6 18.8 158 507-683 178-338 (435)
96 3dw8_B Serine/threonine-protei 99.8 2.5E-20 8.5E-25 202.7 21.0 172 477-677 175-378 (447)
97 4h5i_A Guanine nucleotide-exch 99.8 3.1E-20 1.1E-24 200.3 21.3 146 507-672 189-343 (365)
98 2j04_A TAU60, YPL007P, hypothe 99.8 2.7E-20 9.3E-25 210.7 21.6 184 480-693 16-235 (588)
99 4gga_A P55CDC, cell division c 99.8 3.4E-19 1.2E-23 194.7 28.6 167 507-695 117-287 (420)
100 1pgu_A Actin interacting prote 99.8 9.9E-20 3.4E-24 205.7 24.5 181 480-695 19-217 (615)
101 4ggc_A P55CDC, cell division c 99.8 2.9E-19 9.8E-24 184.6 25.5 189 502-695 75-295 (318)
102 2vdu_B TRNA (guanine-N(7)-)-me 99.8 2E-19 6.8E-24 198.4 25.6 174 503-695 158-365 (450)
103 1p22_A F-BOX/WD-repeat protein 99.8 1.3E-19 4.4E-24 198.7 23.0 181 505-694 182-395 (435)
104 2oaj_A Protein SNI1; WD40 repe 99.8 4.6E-20 1.6E-24 222.5 21.0 172 505-691 446-689 (902)
105 3v7d_B Cell division control p 99.8 6.6E-19 2.3E-23 193.5 27.9 142 546-694 301-443 (464)
106 2w18_A PALB2, fancn, partner a 99.8 1.6E-19 5.6E-24 193.1 21.2 145 546-695 169-337 (356)
107 3lrv_A PRE-mRNA-splicing facto 99.8 5E-20 1.7E-24 195.5 17.1 164 505-695 47-225 (343)
108 1p22_A F-BOX/WD-repeat protein 99.8 8.6E-19 2.9E-23 192.2 27.4 161 507-694 144-306 (435)
109 3sfz_A APAF-1, apoptotic pepti 99.8 4.5E-19 1.6E-23 218.8 28.1 201 474-695 629-893 (1249)
110 3jro_A Fusion protein of prote 99.8 1.4E-19 4.8E-24 213.8 22.5 172 506-695 67-265 (753)
111 1yfq_A Cell cycle arrest prote 99.8 1.7E-19 5.9E-24 188.6 20.2 179 477-694 9-203 (342)
112 1pgu_A Actin interacting prote 99.8 6.1E-19 2.1E-23 199.3 26.0 171 507-693 79-262 (615)
113 2j04_A TAU60, YPL007P, hypothe 99.8 4.1E-19 1.4E-23 201.1 24.2 171 478-691 84-273 (588)
114 4ggc_A P55CDC, cell division c 99.8 1.7E-18 5.9E-23 178.8 26.8 167 507-695 37-207 (318)
115 1yfq_A Cell cycle arrest prote 99.8 3E-19 1E-23 186.8 20.9 163 507-695 69-262 (342)
116 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.8E-18 6.2E-23 189.7 26.5 138 546-691 190-327 (445)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2E-18 6.8E-23 189.4 26.1 162 506-695 209-373 (445)
118 2w18_A PALB2, fancn, partner a 99.8 9.5E-19 3.3E-23 187.3 21.1 143 505-670 192-355 (356)
119 3vu4_A KMHSV2; beta-propeller 99.8 5.4E-18 1.9E-22 181.7 23.9 178 478-695 18-251 (355)
120 3mmy_A MRNA export factor; mRN 99.8 2.4E-18 8.2E-23 180.5 20.4 144 544-691 28-178 (368)
121 3vu4_A KMHSV2; beta-propeller 99.8 1.1E-17 3.8E-22 179.2 24.4 111 559-673 141-272 (355)
122 2oit_A Nucleoporin 214KDA; NH2 99.8 1.7E-18 5.9E-23 191.8 17.4 139 553-695 90-251 (434)
123 4gq1_A NUP37; propeller, trans 99.8 1.2E-18 4.3E-23 189.3 14.3 138 553-691 87-262 (393)
124 1l0q_A Surface layer protein; 99.7 1.8E-16 6E-21 169.7 25.8 164 507-695 3-168 (391)
125 1l0q_A Surface layer protein; 99.7 3.6E-16 1.2E-20 167.2 28.0 164 507-695 45-210 (391)
126 3bws_A Protein LP49; two-domai 99.7 2.1E-16 7.2E-21 171.4 25.4 166 506-695 181-355 (433)
127 3bws_A Protein LP49; two-domai 99.7 2.4E-16 8.1E-21 171.0 21.2 172 506-695 134-313 (433)
128 2oit_A Nucleoporin 214KDA; NH2 99.7 1.4E-16 4.7E-21 176.5 19.5 170 479-673 92-279 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.7 7.2E-15 2.4E-19 161.3 26.1 175 480-695 179-364 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 7E-15 2.4E-19 161.4 23.0 142 549-695 172-321 (415)
131 2ojh_A Uncharacterized protein 99.6 1.4E-14 4.9E-19 146.3 19.3 166 507-695 54-227 (297)
132 2ojh_A Uncharacterized protein 99.6 3E-14 1E-18 143.9 17.7 161 510-695 16-183 (297)
133 3vgz_A Uncharacterized protein 99.6 5.1E-13 1.7E-17 139.9 26.0 158 514-695 162-324 (353)
134 3vgz_A Uncharacterized protein 99.6 4.4E-13 1.5E-17 140.4 25.1 134 558-695 143-282 (353)
135 1nir_A Nitrite reductase; hemo 99.5 3.5E-13 1.2E-17 153.6 23.3 165 507-695 150-334 (543)
136 1ri6_A Putative isomerase YBHE 99.5 6.6E-13 2.3E-17 138.0 22.2 171 507-695 50-241 (343)
137 3u4y_A Uncharacterized protein 99.5 9.3E-13 3.2E-17 137.3 22.9 167 508-695 54-231 (331)
138 3u4y_A Uncharacterized protein 99.5 1.2E-12 4.3E-17 136.3 23.6 166 507-695 11-186 (331)
139 1nir_A Nitrite reductase; hemo 99.5 1.4E-12 4.8E-17 148.6 24.9 161 503-681 187-364 (543)
140 1ri6_A Putative isomerase YBHE 99.5 2.6E-12 8.9E-17 133.5 24.2 170 507-695 96-287 (343)
141 1xfd_A DIP, dipeptidyl aminope 99.5 8.6E-14 2.9E-18 161.7 13.6 165 507-695 29-265 (723)
142 1k32_A Tricorn protease; prote 99.5 1E-12 3.5E-17 160.5 20.8 163 507-695 309-482 (1045)
143 3hfq_A Uncharacterized protein 99.5 1.5E-11 5E-16 129.6 26.1 173 506-695 97-296 (347)
144 2ecf_A Dipeptidyl peptidase IV 99.4 5.9E-13 2E-17 155.2 16.5 177 482-695 111-347 (741)
145 2ecf_A Dipeptidyl peptidase IV 99.4 1.9E-12 6.5E-17 150.9 19.9 193 479-691 36-294 (741)
146 1xfd_A DIP, dipeptidyl aminope 99.4 1.1E-12 3.8E-17 152.3 17.1 141 552-695 110-316 (723)
147 3scy_A Hypothetical bacterial 99.4 2.1E-11 7E-16 129.4 24.9 187 482-691 157-359 (361)
148 3hfq_A Uncharacterized protein 99.4 1.3E-11 4.5E-16 130.0 23.1 149 546-695 76-250 (347)
149 2z3z_A Dipeptidyl aminopeptida 99.4 1.7E-12 5.8E-17 150.7 17.6 183 505-695 131-366 (706)
150 1z68_A Fibroblast activation p 99.4 2.6E-13 9E-18 158.0 10.6 164 507-695 28-263 (719)
151 1pby_B Quinohemoprotein amine 99.4 9.3E-12 3.2E-16 128.9 21.1 161 507-695 47-290 (337)
152 3o4h_A Acylamino-acid-releasin 99.4 2.3E-12 8E-17 146.4 17.9 124 559-691 153-290 (582)
153 1pby_B Quinohemoprotein amine 99.4 6.8E-12 2.3E-16 129.9 18.6 153 507-683 2-174 (337)
154 2z3z_A Dipeptidyl aminopeptida 99.4 5.7E-12 2E-16 146.2 19.8 140 553-695 255-411 (706)
155 3scy_A Hypothetical bacterial 99.3 7E-11 2.4E-15 125.3 22.6 139 555-695 154-316 (361)
156 3o4h_A Acylamino-acid-releasin 99.3 1.6E-11 5.4E-16 139.6 18.5 129 558-695 112-256 (582)
157 1jmx_B Amine dehydrogenase; ox 99.3 6.7E-11 2.3E-15 123.3 21.0 129 557-695 93-305 (349)
158 1jmx_B Amine dehydrogenase; ox 99.3 6.4E-11 2.2E-15 123.4 20.2 154 505-682 10-185 (349)
159 4a5s_A Dipeptidyl peptidase 4 99.3 2.5E-11 8.7E-16 142.6 18.8 174 483-695 20-270 (740)
160 1k32_A Tricorn protease; prote 99.3 3.5E-11 1.2E-15 146.9 20.7 119 550-671 373-501 (1045)
161 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.6E-10 8.8E-15 122.0 22.2 169 507-695 52-265 (365)
162 1z68_A Fibroblast activation p 99.3 7.6E-12 2.6E-16 145.6 10.3 137 556-695 110-322 (719)
163 1jof_A Carboxy-CIS,CIS-muconat 99.2 8.5E-10 2.9E-14 118.0 23.3 140 554-694 143-316 (365)
164 1xip_A Nucleoporin NUP159; bet 99.2 2.6E-10 9E-15 124.4 17.7 126 554-694 87-223 (388)
165 3azo_A Aminopeptidase; POP fam 99.2 3E-10 1E-14 130.7 18.7 139 554-695 128-304 (662)
166 3azo_A Aminopeptidase; POP fam 99.2 3E-10 1E-14 130.6 18.6 135 553-691 185-344 (662)
167 3fvz_A Peptidyl-glycine alpha- 99.2 5.7E-09 2E-13 110.1 26.2 139 553-694 88-250 (329)
168 3pe7_A Oligogalacturonate lyas 99.1 1.1E-09 3.8E-14 116.5 19.3 140 552-695 77-248 (388)
169 2oiz_A Aromatic amine dehydrog 99.1 2.9E-09 1E-13 114.4 21.2 87 603-695 259-358 (361)
170 3fvz_A Peptidyl-glycine alpha- 99.1 6.7E-09 2.3E-13 109.5 22.3 175 507-695 103-302 (329)
171 3pe7_A Oligogalacturonate lyas 99.1 1.1E-09 3.7E-14 116.6 16.1 145 547-694 22-197 (388)
172 4a5s_A Dipeptidyl peptidase 4 99.1 3.4E-10 1.2E-14 133.0 12.0 115 557-677 18-146 (740)
173 1q7f_A NHL, brain tumor CG1071 99.0 1.9E-08 6.5E-13 102.8 22.5 136 554-695 119-261 (286)
174 2xdw_A Prolyl endopeptidase; a 99.0 9.1E-09 3.1E-13 120.2 21.4 135 558-694 173-345 (710)
175 1q7f_A NHL, brain tumor CG1071 99.0 4.7E-08 1.6E-12 99.8 23.6 169 507-695 42-217 (286)
176 2dg1_A DRP35, lactonase; beta 99.0 7.4E-08 2.5E-12 100.5 25.0 166 507-695 57-243 (333)
177 2dg1_A DRP35, lactonase; beta 99.0 1.9E-08 6.6E-13 105.0 19.8 144 548-695 37-192 (333)
178 3e5z_A Putative gluconolactona 99.0 4.4E-08 1.5E-12 100.9 21.4 176 480-695 28-228 (296)
179 2gop_A Trilobed protease; beta 98.9 2.2E-08 7.5E-13 104.8 18.2 125 558-693 106-272 (347)
180 2oiz_A Aromatic amine dehydrog 98.9 2.4E-08 8.1E-13 107.3 18.7 80 549-630 45-142 (361)
181 3e5z_A Putative gluconolactona 98.9 7.8E-08 2.7E-12 99.0 20.5 128 557-691 116-263 (296)
182 2xdw_A Prolyl endopeptidase; a 98.9 9.6E-08 3.3E-12 111.5 23.7 141 552-695 229-390 (710)
183 3no2_A Uncharacterized protein 98.9 8.5E-08 2.9E-12 99.3 20.3 159 506-691 5-172 (276)
184 2bkl_A Prolyl endopeptidase; m 98.9 3.9E-08 1.3E-12 114.6 19.1 173 481-691 122-327 (695)
185 3c5m_A Oligogalacturonate lyas 98.9 5.5E-09 1.9E-13 110.9 10.8 133 559-695 84-248 (396)
186 1rwi_B Serine/threonine-protei 98.9 1.3E-07 4.4E-12 95.3 20.3 136 556-695 67-202 (270)
187 1rwi_B Serine/threonine-protei 98.9 1.5E-07 5.2E-12 94.7 20.4 137 556-695 108-244 (270)
188 2gop_A Trilobed protease; beta 98.8 6.8E-08 2.3E-12 101.1 17.5 124 557-694 172-311 (347)
189 3c5m_A Oligogalacturonate lyas 98.8 4.6E-09 1.6E-13 111.5 7.8 135 557-694 37-197 (396)
190 1xip_A Nucleoporin NUP159; bet 98.8 2.4E-08 8.3E-13 108.8 12.7 124 557-695 39-173 (388)
191 2z2n_A Virginiamycin B lyase; 98.8 2.3E-06 8E-11 86.7 26.4 137 554-695 55-193 (299)
192 3dsm_A Uncharacterized protein 98.7 2E-07 6.8E-12 98.4 17.8 130 558-691 174-319 (328)
193 1qks_A Cytochrome CD1 nitrite 98.7 1.4E-06 4.7E-11 99.7 26.0 165 507-695 168-352 (567)
194 3dsm_A Uncharacterized protein 98.7 5.4E-07 1.8E-11 95.1 20.5 163 507-695 55-235 (328)
195 2bkl_A Prolyl endopeptidase; m 98.7 6.2E-08 2.1E-12 112.9 14.4 136 553-691 118-279 (695)
196 3no2_A Uncharacterized protein 98.7 1.1E-06 3.9E-11 90.8 22.1 122 556-682 77-205 (276)
197 2z2n_A Virginiamycin B lyase; 98.7 4.4E-06 1.5E-10 84.6 26.2 137 554-695 97-235 (299)
198 3g4e_A Regucalcin; six bladed 98.7 1E-06 3.6E-11 91.2 21.6 136 557-694 99-251 (297)
199 1qks_A Cytochrome CD1 nitrite 98.7 3.2E-06 1.1E-10 96.7 26.0 158 506-681 208-382 (567)
200 1yr2_A Prolyl oligopeptidase; 98.6 7.2E-07 2.5E-11 104.7 19.4 132 558-691 211-371 (741)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 2.5E-06 8.6E-11 87.6 20.2 136 556-695 117-278 (314)
202 3g4e_A Regucalcin; six bladed 98.6 7.8E-06 2.7E-10 84.6 23.2 163 507-694 26-208 (297)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 4.3E-06 1.5E-10 85.8 20.8 136 554-695 69-236 (314)
204 2qc5_A Streptogramin B lactona 98.6 2.7E-05 9.4E-10 78.7 26.6 137 554-695 60-198 (300)
205 2qc5_A Streptogramin B lactona 98.5 2.9E-05 9.8E-10 78.6 26.2 137 554-695 102-240 (300)
206 2ghs_A AGR_C_1268P; regucalcin 98.5 1.4E-05 4.8E-10 84.1 24.2 133 557-695 135-282 (326)
207 2ghs_A AGR_C_1268P; regucalcin 98.5 1.4E-05 4.7E-10 84.1 23.6 132 556-694 90-239 (326)
208 1yr2_A Prolyl oligopeptidase; 98.5 9.7E-06 3.3E-10 95.1 24.4 140 552-695 264-417 (741)
209 3hrp_A Uncharacterized protein 98.5 9.1E-06 3.1E-10 88.9 22.0 132 561-695 176-333 (409)
210 3iuj_A Prolyl endopeptidase; h 98.5 2.1E-06 7.1E-11 100.2 17.8 127 559-687 178-331 (693)
211 3hrp_A Uncharacterized protein 98.4 1.5E-05 5E-10 87.2 22.3 136 554-695 217-390 (409)
212 3iuj_A Prolyl endopeptidase; h 98.4 7.7E-07 2.6E-11 103.9 12.8 134 553-688 126-285 (693)
213 2hz6_A Endoplasmic reticulum t 98.3 5.1E-08 1.8E-12 105.1 -0.6 147 506-680 9-157 (369)
214 2mad_H Methylamine dehydrogena 98.3 2.8E-05 9.7E-10 83.9 21.0 120 548-676 60-199 (373)
215 3dr2_A Exported gluconolactona 98.3 3.3E-05 1.1E-09 80.1 20.1 143 507-674 58-226 (305)
216 2qe8_A Uncharacterized protein 98.3 1.3E-05 4.4E-10 84.9 17.1 124 556-681 17-163 (343)
217 3sjl_D Methylamine dehydrogena 98.2 1E-05 3.4E-10 88.0 14.4 118 561-681 38-178 (386)
218 2hz6_A Endoplasmic reticulum t 98.2 3.6E-07 1.2E-11 98.5 2.7 113 567-688 92-207 (369)
219 2qe8_A Uncharacterized protein 98.2 8.5E-05 2.9E-09 78.5 20.7 138 556-695 120-301 (343)
220 3dr2_A Exported gluconolactona 98.2 2.6E-05 9E-10 80.8 15.9 138 549-695 38-198 (305)
221 1mda_H Methylamine dehydrogena 98.2 2E-05 6.9E-10 85.2 15.3 88 603-694 269-366 (368)
222 3sjl_D Methylamine dehydrogena 98.1 6.9E-05 2.4E-09 81.4 18.0 123 546-675 70-212 (386)
223 1mda_H Methylamine dehydrogena 98.1 5.3E-05 1.8E-09 81.9 15.8 80 546-627 57-157 (368)
224 2mad_H Methylamine dehydrogena 98.0 7.1E-05 2.4E-09 80.8 16.3 115 562-680 27-165 (373)
225 2ece_A 462AA long hypothetical 97.9 0.00036 1.2E-08 77.0 18.8 153 505-674 95-291 (462)
226 3c75_H MADH, methylamine dehyd 97.9 0.00015 5.2E-09 79.8 15.6 122 546-674 110-250 (426)
227 2iwa_A Glutamine cyclotransfer 97.9 0.0016 5.4E-08 67.1 22.0 129 559-695 69-216 (266)
228 3c75_H MADH, methylamine dehyd 97.8 0.00012 4E-09 80.7 13.6 114 565-681 82-218 (426)
229 1npe_A Nidogen, entactin; glyc 97.8 0.0053 1.8E-07 61.8 25.1 135 556-695 122-261 (267)
230 1npe_A Nidogen, entactin; glyc 97.8 0.0068 2.3E-07 61.0 25.9 122 556-679 79-205 (267)
231 3nol_A Glutamine cyclotransfer 97.8 0.00095 3.2E-08 68.5 18.6 123 566-695 95-235 (262)
232 2ece_A 462AA long hypothetical 97.7 0.001 3.5E-08 73.3 19.0 123 558-680 190-363 (462)
233 1yiq_A Quinohemoprotein alcoho 97.7 0.00077 2.6E-08 78.7 19.1 115 565-682 314-515 (689)
234 3nok_A Glutaminyl cyclase; bet 97.7 0.001 3.4E-08 68.4 17.6 162 507-695 66-245 (268)
235 1kb0_A Quinohemoprotein alcoho 97.7 0.0006 2E-08 79.4 17.9 120 561-683 318-518 (677)
236 1fwx_A Nitrous oxide reductase 97.7 0.00063 2.2E-08 77.4 16.5 135 557-695 135-341 (595)
237 2iwa_A Glutamine cyclotransfer 97.6 0.0025 8.4E-08 65.7 18.6 132 544-681 8-144 (266)
238 3hxj_A Pyrrolo-quinoline quino 97.6 0.0011 3.7E-08 68.2 16.1 118 555-682 136-253 (330)
239 3mbr_X Glutamine cyclotransfer 97.6 0.0072 2.5E-07 61.3 21.0 122 567-695 74-214 (243)
240 3hxj_A Pyrrolo-quinoline quino 97.5 0.0016 5.4E-08 66.9 16.0 126 555-690 176-301 (330)
241 3nol_A Glutamine cyclotransfer 97.5 0.0023 7.7E-08 65.7 15.8 129 545-681 31-164 (262)
242 2xe4_A Oligopeptidase B; hydro 97.4 0.00079 2.7E-08 79.3 13.7 114 557-673 175-305 (751)
243 1kb0_A Quinohemoprotein alcoho 97.4 0.0019 6.5E-08 75.2 16.3 93 577-671 457-566 (677)
244 2fp8_A Strictosidine synthase; 97.4 0.019 6.4E-07 59.5 22.4 113 557-672 81-216 (322)
245 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.0073 2.5E-07 63.8 19.3 109 566-680 102-215 (376)
246 1yiq_A Quinohemoprotein alcoho 97.3 0.0043 1.5E-07 72.3 17.1 104 576-680 182-346 (689)
247 3mbr_X Glutamine cyclotransfer 97.2 0.012 4.1E-07 59.7 18.0 129 545-681 9-142 (243)
248 3v64_C Agrin; beta propeller, 97.2 0.07 2.4E-06 56.5 24.3 115 557-673 117-235 (349)
249 3nok_A Glutaminyl cyclase; bet 97.2 0.0025 8.4E-08 65.5 12.3 115 558-681 57-173 (268)
250 1fwx_A Nitrous oxide reductase 97.2 0.002 6.8E-08 73.3 12.2 105 578-684 255-383 (595)
251 3v65_B Low-density lipoprotein 97.1 0.075 2.6E-06 57.1 24.4 116 557-673 160-278 (386)
252 2fp8_A Strictosidine synthase; 97.1 0.016 5.6E-07 59.9 17.9 133 557-695 20-195 (322)
253 2xe4_A Oligopeptidase B; hydro 97.0 0.014 4.7E-07 68.6 18.6 113 559-672 224-354 (751)
254 1ijq_A LDL receptor, low-densi 97.0 0.28 9.6E-06 50.9 26.6 114 557-672 78-195 (316)
255 1ijq_A LDL receptor, low-densi 97.0 0.071 2.4E-06 55.4 21.6 136 556-694 30-173 (316)
256 3tc9_A Hypothetical hydrolase; 97.0 0.016 5.3E-07 63.6 17.1 136 557-695 138-280 (430)
257 3v64_C Agrin; beta propeller, 97.0 0.036 1.2E-06 58.8 19.4 136 556-694 73-212 (349)
258 1kv9_A Type II quinohemoprotei 96.9 0.013 4.5E-07 67.9 16.9 118 562-682 306-498 (668)
259 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.013 4.3E-07 61.9 15.4 109 567-681 53-171 (376)
260 3qqz_A Putative uncharacterize 96.9 0.06 2E-06 54.9 19.6 145 549-695 20-183 (255)
261 3p5b_L Low density lipoprotein 96.9 0.2 6.8E-06 54.1 25.0 137 555-694 201-342 (400)
262 3v65_B Low-density lipoprotein 96.9 0.033 1.1E-06 60.0 18.6 137 556-694 116-255 (386)
263 3tc9_A Hypothetical hydrolase; 96.9 0.022 7.6E-07 62.3 17.4 116 554-671 177-300 (430)
264 3qqz_A Putative uncharacterize 96.8 0.23 7.9E-06 50.5 23.4 123 557-680 71-211 (255)
265 3sov_A LRP-6, low-density lipo 96.8 0.19 6.4E-06 52.6 23.3 115 557-672 80-197 (318)
266 3p5b_L Low density lipoprotein 96.8 0.51 1.7E-05 50.8 26.9 119 554-673 157-278 (400)
267 3pbp_A Nucleoporin NUP82; beta 96.8 0.03 1E-06 61.1 16.8 110 557-668 67-208 (452)
268 2p9w_A MAL S 1 allergenic prot 96.8 0.079 2.7E-06 56.0 19.5 113 558-673 65-216 (334)
269 2p4o_A Hypothetical protein; p 96.7 0.085 2.9E-06 54.2 19.7 125 545-673 22-148 (306)
270 3sov_A LRP-6, low-density lipo 96.7 0.17 5.8E-06 52.9 22.1 137 555-694 121-260 (318)
271 2ad6_A Methanol dehydrogenase 96.7 0.012 4E-07 67.1 13.7 115 565-682 311-504 (571)
272 4a2l_A BT_4663, two-component 96.7 0.26 9E-06 57.7 25.5 131 555-691 356-505 (795)
273 2p4o_A Hypothetical protein; p 96.7 0.12 4.1E-06 53.0 20.1 114 557-672 73-198 (306)
274 1kv9_A Type II quinohemoprotei 96.5 0.034 1.2E-06 64.4 16.4 104 576-680 177-341 (668)
275 4hw6_A Hypothetical protein, I 96.5 0.078 2.7E-06 58.1 18.5 116 554-671 180-303 (433)
276 3m0c_C LDL receptor, low-densi 96.4 0.52 1.8E-05 55.7 25.8 138 554-694 512-654 (791)
277 4a2l_A BT_4663, two-component 96.4 0.41 1.4E-05 56.0 24.5 128 555-691 405-550 (795)
278 1flg_A Protein (quinoprotein e 96.3 0.037 1.3E-06 63.2 14.4 115 565-682 331-526 (582)
279 3iot_A Maltose-binding protein 96.2 0.0039 1.3E-07 68.4 5.8 14 52-65 336-349 (449)
280 3m0c_C LDL receptor, low-densi 96.2 0.21 7.1E-06 59.1 20.6 138 555-694 423-567 (791)
281 3pbp_A Nucleoporin NUP82; beta 96.2 0.21 7.2E-06 54.5 18.8 129 562-694 27-189 (452)
282 3amr_A 3-phytase; beta-propell 96.2 0.31 1.1E-05 51.9 19.9 124 556-680 128-272 (355)
283 2ism_A Putative oxidoreductase 96.1 0.069 2.3E-06 56.7 14.8 99 557-659 32-152 (352)
284 1w6s_A Methanol dehydrogenase 96.0 0.045 1.6E-06 62.7 13.6 115 565-682 318-513 (599)
285 2p9w_A MAL S 1 allergenic prot 96.0 0.11 3.7E-06 55.0 15.4 140 552-695 9-195 (334)
286 1k3i_A Galactose oxidase precu 96.0 0.028 9.7E-07 64.7 11.9 116 560-677 190-328 (656)
287 4hw6_A Hypothetical protein, I 96.0 0.13 4.6E-06 56.2 16.5 136 557-695 140-283 (433)
288 2ad6_A Methanol dehydrogenase 96.0 0.082 2.8E-06 60.0 15.2 85 576-662 443-528 (571)
289 3a9g_A Putative uncharacterize 95.8 0.18 6E-06 53.6 16.4 133 556-694 29-206 (354)
290 1n7d_A LDL receptor, low-densi 95.8 0.022 7.6E-07 66.4 9.7 135 557-694 497-636 (699)
291 3kya_A Putative phosphatase; s 95.7 0.17 6E-06 56.4 16.3 136 558-695 141-320 (496)
292 3das_A Putative oxidoreductase 95.7 0.4 1.4E-05 51.0 18.2 141 551-695 27-212 (347)
293 1flg_A Protein (quinoprotein e 95.7 0.15 5E-06 58.2 15.8 83 576-660 465-548 (582)
294 1cru_A Protein (soluble quinop 95.5 0.44 1.5E-05 52.5 18.3 105 556-660 27-163 (454)
295 1w6s_A Methanol dehydrogenase 95.5 0.29 1E-05 55.9 17.3 105 575-680 180-350 (599)
296 3amr_A 3-phytase; beta-propell 95.4 0.18 6.2E-06 53.7 14.1 122 566-691 39-187 (355)
297 4a0p_A LRP6, LRP-6, low-densit 95.3 2.8 9.7E-05 48.0 25.2 115 557-673 81-198 (628)
298 1k3i_A Galactose oxidase precu 95.3 0.3 1E-05 56.0 17.0 76 555-630 242-325 (656)
299 3s94_A LRP-6, low-density lipo 95.3 1.6 5.6E-05 49.8 22.9 117 556-673 84-203 (619)
300 2xbg_A YCF48-like protein; pho 95.2 0.76 2.6E-05 47.8 18.1 134 555-694 121-259 (327)
301 3v9f_A Two-component system se 95.0 1.2 4.2E-05 51.8 21.2 130 555-691 362-502 (781)
302 3kya_A Putative phosphatase; s 95.0 0.52 1.8E-05 52.6 17.0 115 556-671 186-340 (496)
303 2xbg_A YCF48-like protein; pho 94.9 1.9 6.6E-05 44.6 20.5 132 553-691 160-300 (327)
304 3v9f_A Two-component system se 94.9 0.79 2.7E-05 53.5 19.0 132 554-691 405-546 (781)
305 1n7d_A LDL receptor, low-densi 94.7 0.088 3E-06 61.4 10.4 114 558-672 455-571 (699)
306 2g8s_A Glucose/sorbosone dehyd 94.6 0.27 9.2E-06 52.1 12.9 113 557-671 19-172 (353)
307 3s94_A LRP-6, low-density lipo 94.1 10 0.00034 43.2 25.8 116 556-672 392-510 (619)
308 4a0p_A LRP6, LRP-6, low-densit 93.8 12 0.0004 42.8 26.6 133 556-691 389-527 (628)
309 3sre_A PON1, serum paraoxonase 93.6 1.4 4.8E-05 46.9 16.1 134 544-680 152-308 (355)
310 2xzh_A Clathrin heavy chain 1; 93.4 2.7 9.1E-05 44.4 17.2 122 560-686 71-202 (365)
311 2vpj_A Kelch-like protein 12; 93.2 2.1 7.2E-05 43.1 16.2 106 566-676 159-282 (301)
312 3sre_A PON1, serum paraoxonase 92.4 4.5 0.00016 42.9 17.8 112 557-672 113-252 (355)
313 1bpo_A Protein (clathrin); cla 92.3 10 0.00035 41.6 20.3 130 556-687 151-304 (494)
314 2xzh_A Clathrin heavy chain 1; 92.0 9.1 0.00031 40.4 18.8 130 556-687 152-305 (365)
315 2xn4_A Kelch-like protein 2; s 91.8 2.5 8.4E-05 42.7 14.5 106 566-677 155-281 (302)
316 1bpo_A Protein (clathrin); cla 91.5 5 0.00017 44.0 16.8 124 560-688 70-203 (494)
317 3das_A Putative oxidoreductase 91.5 14 0.00048 38.9 20.3 99 555-656 79-216 (347)
318 1tl2_A L10, protein (tachylect 91.4 0.57 1.9E-05 46.7 8.6 105 557-669 42-160 (236)
319 1cru_A Protein (soluble quinop 91.4 14 0.00048 40.3 20.9 118 555-673 76-260 (454)
320 2vpj_A Kelch-like protein 12; 91.4 3.4 0.00012 41.5 15.0 106 566-676 112-235 (301)
321 2xn4_A Kelch-like protein 2; s 90.8 3.7 0.00013 41.3 14.7 106 566-676 108-233 (302)
322 3ii7_A Kelch-like protein 7; p 90.7 4.8 0.00016 40.6 15.4 106 566-675 101-228 (306)
323 2be1_A Serine/threonine-protei 90.3 0.65 2.2E-05 49.2 8.4 113 568-681 11-139 (339)
324 3a9g_A Putative uncharacterize 89.6 19 0.00065 37.7 19.4 100 556-658 73-214 (354)
325 3ii7_A Kelch-like protein 7; p 89.5 5.2 0.00018 40.3 14.4 106 566-676 149-276 (306)
326 2ism_A Putative oxidoreductase 88.5 5.1 0.00018 42.0 13.9 73 598-673 31-115 (352)
327 1zgk_A Kelch-like ECH-associat 87.9 5 0.00017 40.7 13.0 106 566-676 121-244 (308)
328 4asc_A Kelch repeat and BTB do 87.8 8.4 0.00029 39.0 14.7 109 566-678 148-283 (315)
329 1zgk_A Kelch-like ECH-associat 87.8 7 0.00024 39.5 14.1 107 566-677 168-292 (308)
330 2zwa_A Leucine carboxyl methyl 87.6 5.7 0.00019 45.9 14.7 108 566-674 451-579 (695)
331 2wg3_C Hedgehog-interacting pr 87.4 13 0.00044 40.8 16.7 104 557-660 15-158 (463)
332 3ei3_A DNA damage-binding prot 86.8 18 0.0006 44.5 19.0 101 577-680 492-599 (1158)
333 1tl2_A L10, protein (tachylect 86.6 2.1 7.3E-05 42.6 8.7 99 567-672 4-116 (236)
334 1uuj_A Platelet-activating fac 86.1 0.32 1.1E-05 41.0 2.1 38 3-41 5-42 (88)
335 3s25_A Hypothetical 7-bladed b 85.9 4.8 0.00016 41.5 11.6 110 560-680 57-184 (302)
336 2woz_A Kelch repeat and BTB do 85.3 6.5 0.00022 40.0 12.2 109 566-679 158-294 (318)
337 2xtc_A F-box-like/WD repeat-co 84.9 0.6 2.1E-05 39.6 3.3 32 11-42 7-38 (90)
338 4asc_A Kelch repeat and BTB do 84.1 12 0.00041 37.8 13.7 106 566-676 98-225 (315)
339 2zwa_A Leucine carboxyl methyl 83.7 16 0.00054 42.1 15.9 111 565-676 499-639 (695)
340 3sbq_A Nitrous-oxide reductase 82.1 5.2 0.00018 45.1 10.2 94 578-672 299-408 (638)
341 4gq2_M Nucleoporin NUP120; bet 81.8 17 0.00058 43.7 15.5 38 642-680 237-274 (950)
342 2uvk_A YJHT; unknown function, 80.2 39 0.0013 34.5 16.0 51 566-618 65-128 (357)
343 2uvk_A YJHT; unknown function, 79.9 12 0.00041 38.4 11.9 58 620-680 286-350 (357)
344 4gq2_M Nucleoporin NUP120; bet 79.6 25 0.00087 42.1 16.0 37 599-636 237-273 (950)
345 4fhn_B Nucleoporin NUP120; pro 78.9 12 0.00041 45.8 13.1 37 643-680 240-276 (1139)
346 2be1_A Serine/threonine-protei 78.2 3.9 0.00013 43.1 7.4 116 506-637 10-138 (339)
347 3ei3_A DNA damage-binding prot 78.1 32 0.0011 42.2 16.5 111 557-671 515-635 (1158)
348 2woz_A Kelch repeat and BTB do 77.9 49 0.0017 33.2 15.7 109 562-676 52-188 (318)
349 2g8s_A Glucose/sorbosone dehyd 77.2 11 0.00037 39.5 10.6 74 598-672 18-107 (353)
350 3ott_A Two-component system se 75.6 78 0.0027 36.2 18.3 112 556-675 146-263 (758)
351 3s25_A Hypothetical 7-bladed b 75.2 60 0.002 33.1 15.4 102 561-672 150-255 (302)
352 1xi4_A Clathrin heavy chain; a 70.0 23 0.00078 44.4 12.0 123 556-680 151-297 (1630)
353 1xi4_A Clathrin heavy chain; a 68.0 8.2 0.00028 48.2 7.6 118 561-683 71-198 (1630)
354 3b7f_A Glycosyl hydrolase, BNR 66.7 74 0.0025 33.1 14.3 68 556-625 55-144 (394)
355 3ott_A Two-component system se 65.9 1.6E+02 0.0056 33.5 18.1 110 557-675 104-223 (758)
356 3sbq_A Nitrous-oxide reductase 65.1 58 0.002 36.7 13.1 124 558-684 325-492 (638)
357 3b7f_A Glycosyl hydrolase, BNR 59.6 1.3E+02 0.0046 31.0 14.7 135 557-694 233-393 (394)
358 2wg3_C Hedgehog-interacting pr 58.1 1.2E+02 0.0042 32.9 14.3 97 598-695 14-149 (463)
359 3f7f_A Nucleoporin NUP120; nuc 48.2 2.6E+02 0.0089 32.3 15.2 36 643-681 224-259 (729)
360 3uc1_A DNA gyrase subunit A; D 47.6 2.5E+02 0.0084 28.9 13.9 159 508-670 46-226 (327)
361 2zux_A YESW protein; beta-prop 47.4 2.8E+02 0.0095 31.2 14.7 40 554-593 177-245 (591)
362 3kci_A Probable E3 ubiquitin-p 43.9 2.9E+02 0.01 28.6 21.7 112 557-671 106-240 (389)
363 4fhn_B Nucleoporin NUP120; pro 41.7 19 0.00064 44.1 4.8 37 557-593 239-275 (1139)
364 3zwu_A Alkaline phosphatase PH 39.4 75 0.0026 35.9 8.9 58 601-659 479-549 (592)
365 1qb3_A Cyclin-dependent kinase 39.2 7.1 0.00024 35.7 0.3 12 24-35 12-23 (150)
366 1sqj_A OXG-RCBH, oligoxylogluc 38.8 4.8E+02 0.017 30.0 16.1 108 555-663 14-143 (789)
367 3f7f_A Nucleoporin NUP120; nuc 38.6 40 0.0014 39.1 6.5 36 557-594 223-258 (729)
368 3zwu_A Alkaline phosphatase PH 37.0 81 0.0028 35.6 8.7 58 558-615 478-548 (592)
369 2zuy_A YESX protein; beta-prop 35.8 4.7E+02 0.016 29.5 14.3 47 637-683 364-415 (620)
370 3qhy_B Beta-lactamase inhibito 35.6 3.4E+02 0.012 26.9 15.4 121 481-628 41-168 (282)
371 2d68_A FOP, FGFR1OP; alpha hel 35.6 33 0.0011 28.4 3.8 30 11-40 20-49 (82)
372 2zux_A YESW protein; beta-prop 35.1 5.2E+02 0.018 28.9 18.1 57 637-694 360-423 (591)
373 2cn3_A Xyloglucanase, beta-1,4 35.0 3.6E+02 0.012 30.8 14.1 103 557-660 24-151 (737)
374 4a9v_A PHOX; hydrolase, beta-p 31.3 2.1E+02 0.0071 32.3 10.6 63 599-662 477-552 (592)
375 4a9v_A PHOX; hydrolase, beta-p 30.5 1.6E+02 0.0056 33.1 9.6 59 557-615 477-548 (592)
376 3qhy_B Beta-lactamase inhibito 28.9 4.3E+02 0.015 26.1 13.4 161 481-672 80-246 (282)
377 3hx6_A Type 4 fimbrial biogene 26.8 6.5E+02 0.022 28.1 13.6 113 567-680 85-240 (570)
378 3kci_A Probable E3 ubiquitin-p 24.6 5.9E+02 0.02 26.2 20.1 111 556-671 211-344 (389)
379 4h3o_A Lectin; cadmium, plant 22.5 3.4E+02 0.012 22.7 9.7 77 559-656 21-97 (105)
380 1sqj_A OXG-RCBH, oligoxylogluc 22.5 9.1E+02 0.031 27.6 15.0 104 556-661 64-189 (789)
381 3mez_A Mannose-specific lectin 21.1 3.1E+02 0.011 23.2 7.8 78 559-656 22-99 (111)
382 4hvt_A Ritya.17583.B, post-pro 20.9 5.2E+02 0.018 29.6 11.9 96 575-671 318-429 (711)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=9e-26 Score=242.44 Aligned_cols=168 Identities=16% Similarity=0.168 Sum_probs=147.1
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCT 584 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~-~LaSgs~Dg~V~IWDl 584 (695)
.+++++|+.|++|++|+...+ ..+..+.+|.+.|++++|++++. +|++|+.|++|+|||+
T Consensus 139 g~~l~sgs~d~~i~iwd~~~~-------------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~ 199 (344)
T 4gqb_B 139 GTQAVSGSKDICIKVWDLAQQ-------------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDT 199 (344)
T ss_dssp SSEEEEEETTSCEEEEETTTT-------------------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCEEEEEeCCCeEEEEECCCC-------------------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccc
Confidence 378999999999999976432 46678899999999999999885 7899999999999999
Q ss_pred CCCeEEEEec--ccCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeC
Q 005473 585 ESFTVKSTLE--EHTQWITDVRFSPS-LSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDN 661 (695)
Q Consensus 585 ~t~~~~~~l~--~H~~~V~~v~~spd-g~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~ 661 (695)
++++++..+. .|...|++++|+|+ +.+|++|+.|++|+|||+++++ ++..+.+|...|++|+|+|++..+|++|+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 200 RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS-CVLSSAVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEET
T ss_pred cccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-EEEEEcCCCCCEEEEEEccCCCeEEEEEeC
Confidence 9999888774 45678999999995 6788999999999999999866 589999999999999999999778899999
Q ss_pred CCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 662 NSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 662 Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
|++|+|||+++++++ .+.+|.+.|++|+| +|+
T Consensus 279 D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~-sp~ 310 (344)
T 4gqb_B 279 DCSLAVLDSSLSELF-RSQAHRDFVRDATW-SPL 310 (344)
T ss_dssp TSCEEEECTTCCEEE-EECCCSSCEEEEEE-CSS
T ss_pred CCeEEEEECCCCcEE-EEcCCCCCEEEEEE-eCC
Confidence 999999999998765 46799999999999 985
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=237.90 Aligned_cols=199 Identities=19% Similarity=0.332 Sum_probs=168.3
Q ss_pred ccCCCCCceEEEEecCCCcccc--------ccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceee
Q 005473 475 QHNGASSKSLLMFGSDGMGSLT--------SAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFT 546 (695)
Q Consensus 475 ~~s~s~~~s~l~~~~dg~~~la--------~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~ 546 (695)
..+++.+..+..|.......+. +..-.+.+...++++|+.|+.|++|+...+ .
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~-------------------~ 155 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-------------------K 155 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC-------------------S
T ss_pred EEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC-------------------c
Confidence 3445566777777654431110 011113344589999999999999976433 2
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 005473 547 EFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (695)
Q Consensus 547 ~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl 626 (695)
....+..|...|.+++|+|++++|++|+.|+.|+|||+++++++..+.+|...|.+++|+|++.+|++|+.|++|+|||+
T Consensus 156 ~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 156 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 34556788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 627 ENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 627 ~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+++. ++..+.+|...|.+++|+|++. +|++|+.|++|+|||+++++++.++.+|.+.|++|+| +|+
T Consensus 236 ~~~~-~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~-s~~ 301 (321)
T 3ow8_A 236 QHAN-LAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY-NGN 301 (321)
T ss_dssp TTCC-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-CTT
T ss_pred CCcc-eeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEE-CCC
Confidence 9866 4789999999999999999988 6779999999999999999999999999999999999 985
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=1.5e-25 Score=240.79 Aligned_cols=172 Identities=19% Similarity=0.218 Sum_probs=147.2
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
..+++|+.|++|++|+...+.. .......+.+|.+.|++|+|+|+|++|++|+.|++|+|||+++
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~---------------~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENET---------------LIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSS---------------CEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CeEEEEECCCEEEEEeccCCCc---------------eeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 4578999999999997754421 1122234568999999999999999999999999999999999
Q ss_pred CeEEEEecccCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCeeEEEE--ecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSL-SRLATSSADRTVRVWDTENPDYSLRTF--TGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg-~~LaTgs~DgtIrvWDl~t~~~~l~~~--~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
++++..+.+|.+.|++++|+|++ .+|++++.|++|+|||+++++. +..+ ..|...+++++|+|++..+|++|+.||
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-EEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce-eeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 99999999999999999999987 5789999999999999998764 5554 345667999999998888999999999
Q ss_pred cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 664 EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|+|||+++++++.++.+|...|++|+| +|+
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~f-sp~ 268 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVF-SPH 268 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEE-CSS
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEE-ccC
Confidence 9999999999999999999999999999 985
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=1.2e-25 Score=246.02 Aligned_cols=183 Identities=21% Similarity=0.377 Sum_probs=167.5
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+..++..+.|+|++ .++++|+.|++|++|+...+ ..+..+.+|.
T Consensus 105 ~gh~~~V~~~~~~p~~---------------~~l~s~s~Dg~i~vwd~~~~-------------------~~~~~l~~h~ 150 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVF---------------SVMVSASEDATIKVWDYETG-------------------DFERTLKGHT 150 (410)
T ss_dssp ECCSSCEEEEEECSSS---------------SEEEEEESSSCEEEEETTTC-------------------CCCEEECCCS
T ss_pred cccCCcEEEEEEcCCC---------------CEEEEEeCCCeEEEEECCCC-------------------cEEEEEeccC
Confidence 3456788899999876 68999999999999976443 2346778999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
+.|.+|+|+|++++|++|+.|++|+|||+.+++++.++.+|...|.+++|+|++.+|++|+.|++|++||++++. ++.+
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~-~~~~ 229 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKT 229 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-EEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999866 5899
Q ss_pred EecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.+|...|.++.|+|++. +|++|+.|+.|++||+++++++..+.+|...|.+++| +|+
T Consensus 230 ~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~-~~~ 287 (410)
T 1vyh_C 230 FTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKECKAELREHRHVVECISW-APE 287 (410)
T ss_dssp EECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-CCS
T ss_pred EeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEE-cCc
Confidence 999999999999999987 7779999999999999999999999999999999999 884
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=2.5e-25 Score=233.05 Aligned_cols=183 Identities=19% Similarity=0.267 Sum_probs=162.8
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
.+...+..+.|+|++ .++++|+.|++|++|+...+ ..+..+..|..
T Consensus 11 ~h~~~V~~~~fsp~~---------------~~l~s~~~dg~v~lWd~~~~-------------------~~~~~~~~~~~ 56 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTE---------------PWVLTTLYSGRVELWNYETQ-------------------VEVRSIQVTET 56 (304)
T ss_dssp EECSCEEEEEECSSS---------------SEEEEEETTSEEEEEETTTT-------------------EEEEEEECCSS
T ss_pred CCCCceEEEEECCCC---------------CEEEEEcCCCcEEEEECCCC-------------------ceeEEeeccCC
Confidence 345677888888876 78999999999999976432 35677889999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF 636 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~ 636 (695)
+|.+++|++++++|++|+.|++|+|||+.+++++..+.+|.+.|++++|+|++.+|++|+.|++|++||++++..+...+
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876667889
Q ss_pred ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe-cCCCcEEEEEEeCC
Q 005473 637 TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK-NFFESFVSVRVVQP 694 (695)
Q Consensus 637 ~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~-~h~~~VtsVaf~sP 694 (695)
.+|...|.+++|+|++..+|++|+.|++|++||++++.+...+. +|...|..++| +|
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~-~~ 194 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDY-YP 194 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEE-CC
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEE-EE
Confidence 99999999999999655688899999999999999887776665 56688999998 76
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=4.9e-25 Score=232.65 Aligned_cols=189 Identities=17% Similarity=0.259 Sum_probs=165.7
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+..+.|++++. +++++|+.|++|++|+..... .....++..+.+|.
T Consensus 14 ~gH~~~V~~l~~~~~~~--------------~~l~s~s~D~~v~~W~~~~~~--------------~~~~~~~~~~~~h~ 65 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQP--------------NLLLSASRDKTLISWKLTGDD--------------QKFGVPVRSFKGHS 65 (319)
T ss_dssp CCCSSCEEEEEECSSCT--------------TEEEEEETTSEEEEEEEEEET--------------TEEEEEEEEEECCS
T ss_pred ccccceEEEEEccCCCc--------------cEEEEecCCccEEEecCCCCC--------------ccccccceEEeCCc
Confidence 44666788888887654 789999999999999653221 11224567889999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
..|.+|+|++++++|++|+.|++|+|||+++++++..+.+|...|.+++|+|++.+|++|+.|++|++||++. .++..
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~ 143 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLAT 143 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974 35788
Q ss_pred EecCCCCeEEEEEecCCC-----eEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTGHSTTVMSLDFHPSKE-----DLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~~V~sl~fspdg~-----~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.+|...|.++.|+|.+. .++++|+.|+.|++||+++++++..+.+|...|++++| +|+
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~-sp~ 207 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTA-SPD 207 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEE-CTT
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEE-cCC
Confidence 999999999999998632 37889999999999999999999999999999999999 986
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=6.9e-25 Score=229.67 Aligned_cols=170 Identities=22% Similarity=0.382 Sum_probs=150.4
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT 584 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl 584 (695)
..+++++|+.|++|++|+...+ ..+..+.+|.+.|.+|+|+|++++|++|+.|++|+|||+
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~-------------------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTG-------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTC-------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred CCCEEEEECCCCEEEEEECCCC-------------------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 3478999999999999976433 356678899999999999999999999999999999999
Q ss_pred CCC-eEEEEecccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEec--CCCeEEEEEe
Q 005473 585 ESF-TVKSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHP--SKEDLLCSCD 660 (695)
Q Consensus 585 ~t~-~~~~~l~~H~~~V~~v~~sp-dg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fsp--dg~~llaSgs 660 (695)
+++ .+...+.+|...|.+++|+| ++.+|++|+.|++|++||++..........+|...|..++|+| ++. +|++|+
T Consensus 127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s 205 (304)
T 2ynn_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITAS 205 (304)
T ss_dssp GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC-EEEEEE
T ss_pred CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC-EEEEEc
Confidence 877 56678899999999999999 6789999999999999999887654555567778899999987 444 788999
Q ss_pred CCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 661 NNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 661 ~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|++|++||+++++++.++.+|...|++++| +|+
T Consensus 206 ~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~-~p~ 239 (304)
T 2ynn_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVF-HPT 239 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEE-CSS
T ss_pred CCCeEEEEeCCCCccceeeCCCCCCEEEEEE-CCC
Confidence 9999999999999999999999999999999 985
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.94 E-value=1.2e-24 Score=231.56 Aligned_cols=185 Identities=22% Similarity=0.304 Sum_probs=155.2
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCC-----------------------------CCCccccccccCCCceeeeEEEecCCC
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDAD-----------------------------PRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~-----------------------------~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
...++++|+.|+.|++|+...... ..+...++|+..++ ..+..+.+|.
T Consensus 108 ~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~---~~~~~~~~h~ 184 (340)
T 1got_B 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG---QQTTTFTGHT 184 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTT---EEEEEECCCS
T ss_pred CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCC---cEEEEEcCCC
Confidence 346788888888888887643210 01222344544443 4567788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
+.|.+++|+|++++|++|+.|++|+|||++++.++..+.+|...|++++|+|++.+|++|+.|++|++||++++.. +..
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~-~~~ 263 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE-LMT 263 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE-EEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998654 555
Q ss_pred Eec--CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTG--HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~g--h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.. +...|++++|+|++. +|++|+.|+.|++||+.+++++..+.+|.++|++|+| +|+
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~-s~d 323 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV-TDD 323 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-CTT
T ss_pred EccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEE-cCC
Confidence 542 335799999999998 6779999999999999999999999999999999999 986
No 9
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=9.1e-25 Score=228.03 Aligned_cols=187 Identities=16% Similarity=0.224 Sum_probs=159.3
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+..+.|++++ +++++|+.|++|++|+.... ....+.++.+|.
T Consensus 6 ~~h~~~V~~~~~s~~g---------------~~las~s~D~~v~iw~~~~~-----------------~~~~~~~l~gH~ 53 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYG---------------KRMATCSSDKTIKIFEVEGE-----------------THKLIDTLTGHE 53 (297)
T ss_dssp CSCSSCEEEEEECTTS---------------SEEEEEETTSCEEEEEBCSS-----------------CBCCCEEECCCS
T ss_pred cCCcCceEEEEECCCC---------------CEEEEEeCCCEEEEEecCCC-----------------CcEEEEEEcccc
Confidence 3456678888888877 78999999999999976422 113456788999
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--EEEEecccCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCC
Q 005473 556 SKVESCHFSPD--GKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVWDTENP 629 (695)
Q Consensus 556 ~~V~~v~fspd--g~~LaSgs~Dg~V~IWDl~t~~--~~~~l~~H~~~V~~v~~spd--g~~LaTgs~DgtIrvWDl~t~ 629 (695)
+.|.+|+|+++ +++|++|+.|++|+|||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|++|++||+++.
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 99999999864 8999999999999999998774 56678899999999999997 889999999999999999876
Q ss_pred Ce-eEEEEecCCCCeEEEEEecCC------------CeEEEEEeCCCcEEEEECCCCe----EEEEEecCCCcEEEEEEe
Q 005473 630 DY-SLRTFTGHSTTVMSLDFHPSK------------EDLLCSCDNNSEIRYWSINNGS----CAGVFKNFFESFVSVRVV 692 (695)
Q Consensus 630 ~~-~l~~~~gh~~~V~sl~fspdg------------~~llaSgs~Dg~IriWDl~tg~----~v~~~~~h~~~VtsVaf~ 692 (695)
.. ....+.+|...|.+++|+|++ ..+|++|+.|+.|++||+++++ ++..+.+|.+.|.+|+|
T Consensus 134 ~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~- 212 (297)
T 2pm7_B 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW- 212 (297)
T ss_dssp SCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE-
T ss_pred CceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE-
Confidence 42 246788999999999999973 2478899999999999998765 67788999999999999
Q ss_pred CCC
Q 005473 693 QPR 695 (695)
Q Consensus 693 sPd 695 (695)
+|+
T Consensus 213 sp~ 215 (297)
T 2pm7_B 213 SPT 215 (297)
T ss_dssp CCC
T ss_pred CCC
Confidence 985
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.93 E-value=9.2e-25 Score=239.09 Aligned_cols=180 Identities=20% Similarity=0.367 Sum_probs=163.3
Q ss_pred CCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCe
Q 005473 479 ASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKV 558 (695)
Q Consensus 479 s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V 558 (695)
...+..+.|++++ .++++|+.|++|++|+...+ .++..+.+|...|
T Consensus 192 ~~~V~~v~~~p~~---------------~~l~s~s~D~~i~~wd~~~~-------------------~~~~~~~~h~~~v 237 (410)
T 1vyh_C 192 DHNVSSVSIMPNG---------------DHIVSASRDKTIKMWEVQTG-------------------YCVKTFTGHREWV 237 (410)
T ss_dssp SSCEEEEEECSSS---------------SEEEEEETTSEEEEEETTTC-------------------CEEEEEECCSSCE
T ss_pred CCCEEEEEEeCCC---------------CEEEEEeCCCeEEEEECCCC-------------------cEEEEEeCCCccE
Confidence 3467788888866 67899999999999976433 3456778999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCC--------------------CCEEEEEeCC
Q 005473 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPS--------------------LSRLATSSAD 618 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spd--------------------g~~LaTgs~D 618 (695)
.++.|++++++|++|+.|++|+|||+++++++..+.+|...|.+++|+|+ +.+|++|+.|
T Consensus 238 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D 317 (410)
T 1vyh_C 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999996 6789999999
Q ss_pred CeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 619 RTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 619 gtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++|++||++++. ++..+.+|...|++++|+|++. +|++|+.||.|+|||+++++++..+.+|...|++|+| +|+
T Consensus 318 ~~i~iwd~~~~~-~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~-~~~ 391 (410)
T 1vyh_C 318 KTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF-HKT 391 (410)
T ss_dssp SEEEEEETTTTE-EEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEE-CSS
T ss_pred CeEEEEECCCCc-eEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEE-cCC
Confidence 999999999865 5889999999999999999998 5569999999999999999999999999999999999 985
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=231.83 Aligned_cols=182 Identities=23% Similarity=0.399 Sum_probs=157.0
Q ss_pred CceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEE
Q 005473 481 SKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVES 560 (695)
Q Consensus 481 ~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~ 560 (695)
.+..+.|+|++ .++++|+.|++|++|+...+. .........+|...|.+
T Consensus 18 ~v~~l~~sp~g---------------~~las~~~D~~i~iw~~~~~~----------------~~~~~~~~~~h~~~v~~ 66 (345)
T 3fm0_A 18 RCWFLAWNPAG---------------TLLASCGGDRRIRIWGTEGDS----------------WICKSVLSEGHQRTVRK 66 (345)
T ss_dssp CEEEEEECTTS---------------SCEEEEETTSCEEEEEEETTE----------------EEEEEEECSSCSSCEEE
T ss_pred cEEEEEECCCC---------------CEEEEEcCCCeEEEEEcCCCc----------------ceeeeeeccccCCcEEE
Confidence 67788888877 678999999999999653220 01112234689999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCC--eEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC--eeEEEE
Q 005473 561 CHFSPDGKLLATGGHDKKAVLWCTESF--TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD--YSLRTF 636 (695)
Q Consensus 561 v~fspdg~~LaSgs~Dg~V~IWDl~t~--~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~--~~l~~~ 636 (695)
|+|+|++++|++|+.|++|+|||+.+. +++..+.+|...|.+++|+|++.+|++|+.|++|++||+++.. .++..+
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 999999999999999999999999876 4678899999999999999999999999999999999998754 356788
Q ss_pred ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCe--EEEEEecCCCcEEEEEEeCCC
Q 005473 637 TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGS--CAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 637 ~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~--~v~~~~~h~~~VtsVaf~sPd 695 (695)
.+|...|.+++|+|++. +|++|+.|+.|++||+++++ ++..+.+|...|++|+| +|+
T Consensus 147 ~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~-sp~ 205 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF-DPS 205 (345)
T ss_dssp CCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE-CTT
T ss_pred cCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE-CCC
Confidence 89999999999999988 67799999999999998875 56788999999999999 985
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-24 Score=229.74 Aligned_cols=190 Identities=27% Similarity=0.450 Sum_probs=151.3
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|+|++ .++++|+.|++|++|+...... .......+..+.+|.+.
T Consensus 57 h~~~v~~v~~sp~~---------------~~las~s~D~~v~iw~~~~~~~------------~~~~~~~~~~~~~h~~~ 109 (330)
T 2hes_X 57 HKKAIRSVAWRPHT---------------SLLAAGSFDSTVSIWAKEESAD------------RTFEMDLLAIIEGHENE 109 (330)
T ss_dssp CCSCEEEEEECTTS---------------SEEEEEETTSCEEEEEC-------------------CCCEEEEEEC----C
T ss_pred ccCCEEEEEECCCC---------------CEEEEEeCCCcEEEEEcccCcC------------ccccceeEEEEcCCCCc
Confidence 33455566666654 7899999999999997643210 11223566778999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCC----CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC-ee
Q 005473 558 VESCHFSPDGKLLATGGHDKKAVLWCTES----FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD-YS 632 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~V~IWDl~t----~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~-~~ 632 (695)
|.+|+|+|++++|++|+.|++|+|||++. .+++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++. .+
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWEC 189 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeE
Confidence 99999999999999999999999999943 35778899999999999999999999999999999999997653 46
Q ss_pred EEEEecCCCCeEEEEEecCC-CeEEEEEeCCCcEEEEECCCC--------eEEEEEec-CCCcEEEEEEeCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSK-EDLLCSCDNNSEIRYWSINNG--------SCAGVFKN-FFESFVSVRVVQPR 695 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg-~~llaSgs~Dg~IriWDl~tg--------~~v~~~~~-h~~~VtsVaf~sPd 695 (695)
+..+.+|.+.|.+++|+|++ ..+|++|+.|++|++||++++ .++..+.+ |...|++|+| +|+
T Consensus 190 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-s~~ 261 (330)
T 2hes_X 190 VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW-GFN 261 (330)
T ss_dssp EEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEE-CTT
T ss_pred EEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEE-cCC
Confidence 88999999999999999984 236789999999999999765 56666665 9999999999 763
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=6.1e-24 Score=221.65 Aligned_cols=183 Identities=22% Similarity=0.392 Sum_probs=163.5
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+..+.|++++ +++++|+.|+.|++|+..++ .....+.+|.
T Consensus 20 ~gh~~~v~~~~~s~~~---------------~~l~s~~~dg~i~iw~~~~~-------------------~~~~~~~~h~ 65 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNG---------------EWLASSSADKLIKIWGAYDG-------------------KFEKTISGHK 65 (312)
T ss_dssp CCCSSCEEEEEECTTS---------------SEEEEEETTSCEEEEETTTC-------------------CEEEEECCCS
T ss_pred cccCCcEEEEEECCCC---------------CEEEEeeCCCeEEEEeCCCc-------------------ccchhhccCC
Confidence 3456778888898876 78999999999999965432 2445678999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
..|.+++|+|++++|++|+.|+.|+|||+++++++..+.+|...|.+++|+|++.+|++|+.|++|++||+++++ ++..
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~ 144 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKT 144 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876 4888
Q ss_pred EecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe-cCCCcEEEEEEeCCC
Q 005473 636 FTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK-NFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~-~h~~~VtsVaf~sPd 695 (695)
+.+|...|.+++|+|++. +|++|+.||.|++||+++++++..+. .|..+|..++| +|+
T Consensus 145 ~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~ 203 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF-SPN 203 (312)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEE-CTT
T ss_pred ecCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEE-CCC
Confidence 999999999999999988 67799999999999999999888775 56678999999 885
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.8e-24 Score=226.95 Aligned_cols=170 Identities=24% Similarity=0.436 Sum_probs=142.5
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEe-cC-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI-PA-STSKVESCHFSPDGKLLATGGHDKKAVLWCT 584 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l-~~-H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl 584 (695)
.++++|+.|++|++|+...+. ...+..+ .+ |...|.+|+|+|++++|++|+.|++|+|||+
T Consensus 25 ~~las~~~D~~i~lw~~~~~~-----------------~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 25 GILATGSTDRKIKLVSVKYDD-----------------FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp TEEEEEESSSCEEEEECSSSC-----------------CEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CEEEEEcCCCEEEEEEecCCC-----------------eEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 378999999999999764321 1233344 34 9999999999999999999999999999998
Q ss_pred CC-------CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC---eeEEEEecCCCCeEEEEEecCCCe
Q 005473 585 ES-------FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD---YSLRTFTGHSTTVMSLDFHPSKED 654 (695)
Q Consensus 585 ~t-------~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~---~~l~~~~gh~~~V~sl~fspdg~~ 654 (695)
+. .+++..+.+|...|++++|+|++.+|++|+.|++|++||++... .++..+.+|...|.+++|+|++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~- 166 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA- 166 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-
Confidence 53 45677889999999999999999999999999999999995432 45788999999999999999987
Q ss_pred EEEEEeCCCcEEEEECCCC--eEEEEEecCCCcEEEEEEeCCC
Q 005473 655 LLCSCDNNSEIRYWSINNG--SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 655 llaSgs~Dg~IriWDl~tg--~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+|++|+.|++|++||+.++ +++..+.+|.+.|.+++| +|+
T Consensus 167 ~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~-~~~ 208 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDF-DKT 208 (330)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE-CCS
T ss_pred EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEe-cCC
Confidence 6779999999999999876 789999999999999999 885
No 15
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=2.5e-24 Score=228.16 Aligned_cols=170 Identities=24% Similarity=0.389 Sum_probs=156.0
Q ss_pred CCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 005473 504 DMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWC 583 (695)
Q Consensus 504 ~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWD 583 (695)
....++++++.|++|++|+...+ ..+..+..|...|.+++|+|++++|++|+.|+.|+|||
T Consensus 90 ~~~~~l~s~s~D~~i~lWd~~~~-------------------~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 90 HTLPIAASSSLDAHIRLWDLENG-------------------KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 150 (321)
T ss_dssp SSSSEEEEEETTSEEEEEETTTT-------------------EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCC-------------------CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 33478999999999999976433 35566778888999999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 584 TESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 584 l~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
+++++....+..|...|.+++|+|++++|++|+.|++|++||+++++ ++..+.+|...|.+++|+|++. +|++|+.|+
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg 228 (321)
T 3ow8_A 151 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDG 228 (321)
T ss_dssp TTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCCCEEEECTTSC-EEEEECTTS
T ss_pred cCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEEEcccCCceeEEEEcCCCC-EEEEEcCCC
Confidence 99999999999999999999999999999999999999999999865 5889999999999999999988 677999999
Q ss_pred cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 664 EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|+|||+++++++..+.+|...|++|+| +|+
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~-sp~ 259 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHASWVLNVAF-CPD 259 (321)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEE-CTT
T ss_pred eEEEEECCCcceeEEEcCCCCceEEEEE-CCC
Confidence 9999999999999999999999999999 985
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=4.4e-24 Score=227.13 Aligned_cols=182 Identities=26% Similarity=0.473 Sum_probs=161.6
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+..+.|++++ +++++|+.|++|++|+.... ..+..+..|.
T Consensus 52 ~gH~~~v~~~~~s~d~---------------~~l~s~s~Dg~v~iWd~~~~-------------------~~~~~~~~~~ 97 (340)
T 1got_B 52 RGHLAKIYAMHWGTDS---------------RLLLSASQDGKLIIWDSYTT-------------------NKVHAIPLRS 97 (340)
T ss_dssp CCCSSCEEEEEECTTS---------------SEEEEEETTTEEEEEETTTC-------------------CEEEEEECSS
T ss_pred cCCCCceEEEEECCCC---------------CEEEEEeCCCcEEEEECCCC-------------------CcceEeecCC
Confidence 3456688889998876 78999999999999965432 3456678899
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC----eEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCe
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESF----TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDY 631 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~----~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~ 631 (695)
..|.+|+|+|++++|++|+.|+.|+|||+.+. .....+.+|.+.|.++.|++++ .|++++.|++|++||++++.
T Consensus 98 ~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~- 175 (340)
T 1got_B 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQ- 175 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTE-
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCc-
Confidence 99999999999999999999999999999765 4567788999999999999875 58999999999999999865
Q ss_pred eEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 632 SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 632 ~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++..+.+|.+.|++++|+|++. ++++|+.|+.|++||+++++++..+.+|...|++|+| +|+
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~-~p~ 237 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF-FPN 237 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEE-CTT
T ss_pred EEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEE-cCC
Confidence 5889999999999999999987 7779999999999999999999999999999999999 985
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.93 E-value=7.8e-24 Score=227.16 Aligned_cols=167 Identities=24% Similarity=0.338 Sum_probs=149.2
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP--DGKLLATGGHDKKAVLWCT 584 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fsp--dg~~LaSgs~Dg~V~IWDl 584 (695)
..+++++.|++|++|+...+ ..+..+.+|...|.+++|+| ++++|++|+.||+|++||+
T Consensus 167 ~~l~t~s~D~~v~lwd~~~~-------------------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~ 227 (354)
T 2pbi_B 167 MQILTASGDGTCALWDVESG-------------------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227 (354)
T ss_dssp SEEEEEETTSEEEEEETTTC-------------------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred CEEEEEeCCCcEEEEeCCCC-------------------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 67899999999999976433 35667889999999999987 5789999999999999999
Q ss_pred CCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecC--CCCeEEEEEecCCCeEEEEEeCC
Q 005473 585 ESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGH--STTVMSLDFHPSKEDLLCSCDNN 662 (695)
Q Consensus 585 ~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh--~~~V~sl~fspdg~~llaSgs~D 662 (695)
++++++..+.+|...|++++|+|++.+|++|+.|++|++||++.... +..+..+ ...+.+++|+|++. +|++|+.|
T Consensus 228 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d 305 (354)
T 2pbi_B 228 RSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE-VAIYSKESIIFGASSVDFSLSGR-LLFAGYND 305 (354)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCTTCCSCEEEEEECTTSS-EEEEEETT
T ss_pred CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-EEEEcCCCcccceeEEEEeCCCC-EEEEEECC
Confidence 99999999999999999999999999999999999999999998653 5555433 34789999999988 67799999
Q ss_pred CcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 663 SEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 663 g~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.|++||+.+++++..+.+|.+.|++|+| +|+
T Consensus 306 ~~i~vwd~~~~~~~~~l~~h~~~v~~l~~-spd 337 (354)
T 2pbi_B 306 YTINVWDVLKGSRVSILFGHENRVSTLRV-SPD 337 (354)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEEEE-CTT
T ss_pred CcEEEEECCCCceEEEEECCCCcEEEEEE-CCC
Confidence 99999999999999999999999999999 986
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=1.3e-23 Score=221.80 Aligned_cols=169 Identities=20% Similarity=0.390 Sum_probs=150.0
Q ss_pred CCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 005473 503 TDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLW 582 (695)
Q Consensus 503 ~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IW 582 (695)
.....++++|+.|++|++|+...+ ..+..+.+|...|.+++|++++.+|++|+.|++|+||
T Consensus 74 s~dg~~l~s~s~D~~v~~wd~~~~-------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vw 134 (319)
T 3frx_A 74 TADGAYALSASWDKTLRLWDVATG-------------------ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW 134 (319)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTT-------------------EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCC-------------------CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 334489999999999999976433 3566788999999999999999999999999999999
Q ss_pred ECCCCeEEEEecccCCCeEEEEEcCC------CCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEE
Q 005473 583 CTESFTVKSTLEEHTQWITDVRFSPS------LSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 583 Dl~t~~~~~~l~~H~~~V~~v~~spd------g~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~ll 656 (695)
|++ +.++..+.+|...|.+++|+|. +.+|++++.|++|++||+++.. +...+.+|...|.+++|+|++. +|
T Consensus 135 d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~-~l 211 (319)
T 3frx_A 135 TIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGT-LI 211 (319)
T ss_dssp ETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSS-EE
T ss_pred ECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCC-EE
Confidence 996 5677888999999999999985 4489999999999999999865 4788999999999999999988 67
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 657 CSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 657 aSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++|+.||.|+|||+++++++..+..+ ..|.+++| +|+
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~-sp~ 248 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAF-SPN 248 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEE-CSS
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEE-cCC
Confidence 79999999999999999999999865 68999999 986
No 19
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=1.1e-23 Score=218.20 Aligned_cols=191 Identities=19% Similarity=0.285 Sum_probs=163.5
Q ss_pred cccCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecC
Q 005473 474 LQHNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPA 553 (695)
Q Consensus 474 l~~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~ 553 (695)
+...+...+..+.|++++ .++++|+.|+.|++|+...+. .....+..+.+
T Consensus 6 ~~~gH~~~v~~~~~~~~~---------------~~l~~~~~dg~i~iw~~~~~~---------------~~~~~~~~~~~ 55 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYG---------------RHVATCSSDQHIKVFKLDKDT---------------SNWELSDSWRA 55 (351)
T ss_dssp EECCCSSCEEEEEECSSS---------------SEEEEEETTSEEEEEEECSSS---------------CCEEEEEEEEC
T ss_pred cCcccccceeEEEEcCCC---------------CEEEEeeCCCeEEEEECCCCC---------------Ccceecceecc
Confidence 334566788999999876 789999999999999765331 12355677889
Q ss_pred CCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCC---------eEEEEecccCCCeEEEEEcCC--CCEEEEEeCCCe
Q 005473 554 STSKVESCHFSP--DGKLLATGGHDKKAVLWCTESF---------TVKSTLEEHTQWITDVRFSPS--LSRLATSSADRT 620 (695)
Q Consensus 554 H~~~V~~v~fsp--dg~~LaSgs~Dg~V~IWDl~t~---------~~~~~l~~H~~~V~~v~~spd--g~~LaTgs~Dgt 620 (695)
|...|++++|+| ++++|++|+.||.|+|||++++ +++..+.+|...|.+++|+|+ +.+|++++.|++
T Consensus 56 ~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 135 (351)
T 3f3f_A 56 HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI 135 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE
T ss_pred CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc
Confidence 999999999999 6999999999999999999887 668888999999999999999 999999999999
Q ss_pred EEEEECCCCCe-----------------------------------------------------------eEEEEecCCC
Q 005473 621 VRVWDTENPDY-----------------------------------------------------------SLRTFTGHST 641 (695)
Q Consensus 621 IrvWDl~t~~~-----------------------------------------------------------~l~~~~gh~~ 641 (695)
|++||++++.. ++..+.+|..
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS 215 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc
Confidence 99999875431 1455668999
Q ss_pred CeEEEEEecCCC---eEEEEEeCCCcEEEEECCCC---------------------------------------------
Q 005473 642 TVMSLDFHPSKE---DLLCSCDNNSEIRYWSINNG--------------------------------------------- 673 (695)
Q Consensus 642 ~V~sl~fspdg~---~llaSgs~Dg~IriWDl~tg--------------------------------------------- 673 (695)
.|++++|+|++. .+|++|+.||.|++||++++
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQ 295 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEE
T ss_pred ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeeccccc
Confidence 999999999983 58889999999999999875
Q ss_pred -eEEEEEecCCCcEEEEEEeCCC
Q 005473 674 -SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 674 -~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+++..+.+|...|++|+| +|+
T Consensus 296 ~~~~~~~~~h~~~v~~~~~-s~~ 317 (351)
T 3f3f_A 296 VELLSEHDDHNGEVWSVSW-NLT 317 (351)
T ss_dssp EEEEEEECTTSSCEEEEEE-CSS
T ss_pred ccEEEEEecccccEEEEEE-cCC
Confidence 678888999999999999 985
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=1.8e-23 Score=222.39 Aligned_cols=194 Identities=16% Similarity=0.252 Sum_probs=159.1
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
.+...+..+.|..... . .....++++|+.|++|++|+...... ......+...+.+|..
T Consensus 19 gH~~~V~~~~~~~s~~-----~----~~d~~~l~sgs~D~~v~iWd~~~~~~------------~~~~~~~~~~l~~h~~ 77 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQK-----E----NEDSPVLISGSRDKTVMIWKLYEEEQ------------NGYFGIPHKALTGHNH 77 (343)
T ss_dssp CCSSCEEEEEECCCSS-----T----TCCCCEEEEEETTSCEEEEEECSSCC------------SSBSEEEEEEECCCSS
T ss_pred cchhhhhheeeEEEee-----c----CCCCCEEEEEcCCCEEEEEECCcCCc------------ccccccccchhccCCC
Confidence 4556667777632111 0 11237899999999999997654321 1112245677899999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF 636 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~ 636 (695)
.|.+++|+|++.+|++|+.|++|+|||+++++++..+.+|...|++++|+|++.+|++++.|++|++||+.. .. ....
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~-~~~~ 155 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-EC-KFSS 155 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CE-EEEC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-Cc-eeee
Confidence 999999999999999999999999999999999999999999999999999999999999999999999984 32 3333
Q ss_pred e---cCCCCeEEEEEecCCC---------eEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 637 T---GHSTTVMSLDFHPSKE---------DLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 637 ~---gh~~~V~sl~fspdg~---------~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
. +|...|.+++|+|++. .+|++|+.|+.|++|| .++.++..+.+|...|++|+| +|+
T Consensus 156 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~-s~~ 224 (343)
T 2xzm_R 156 AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSI-SPN 224 (343)
T ss_dssp CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEE-CTT
T ss_pred ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEE-CCC
Confidence 3 7889999999999872 4788999999999999 457888899999999999999 986
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.92 E-value=9.5e-24 Score=225.25 Aligned_cols=170 Identities=28% Similarity=0.442 Sum_probs=147.3
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
+++++|+.|++|++|+...+ ....+..+.+|...|.+|+|+|++++|++|+.|++|+|||+++
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~-----------------~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQD-----------------DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC------------------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred CEEEEEECCCcEEEEEccCC-----------------CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 78999999999999965322 2345678899999999999999999999999999999999976
Q ss_pred C---eEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC-eeEEEEecCCCCeEEEEEecCCCeEEEEEeCC
Q 005473 587 F---TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD-YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN 662 (695)
Q Consensus 587 ~---~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~-~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D 662 (695)
. .++..+.+|...|.+++|+|++.+|++|+.|++|++||++++. .++.++.+|...|++++|+|++. +|++|+.|
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D 215 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDD 215 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCC
Confidence 5 4567788999999999999999999999999999999998765 35678999999999999999987 67799999
Q ss_pred CcEEEEECCC---------------CeEEEEEec-CCCcEEEEEEeCCC
Q 005473 663 SEIRYWSINN---------------GSCAGVFKN-FFESFVSVRVVQPR 695 (695)
Q Consensus 663 g~IriWDl~t---------------g~~v~~~~~-h~~~VtsVaf~sPd 695 (695)
++|+|||+.. .+|+..+.+ |...|.+|+| +|+
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-~~~ 263 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAW-CQL 263 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEE-CTT
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEE-ecC
Confidence 9999999632 245666665 8899999999 874
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=6.9e-24 Score=228.04 Aligned_cols=180 Identities=18% Similarity=0.219 Sum_probs=156.0
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|++++ +++++|+.|++|++|+...+ ..+..+.+|...
T Consensus 138 h~~~V~~v~~spdg---------------~~l~sgs~dg~v~iwd~~~~-------------------~~~~~~~~h~~~ 183 (357)
T 4g56_B 138 HDDIVKTLSVFSDG---------------TQAVSGGKDFSVKVWDLSQK-------------------AVLKSYNAHSSE 183 (357)
T ss_dssp CSSCEEEEEECSSS---------------SEEEEEETTSCEEEEETTTT-------------------EEEEEECCCSSC
T ss_pred CCCCEEEEEECCCC---------------CEEEEEeCCCeEEEEECCCC-------------------cEEEEEcCCCCC
Confidence 34456666776655 78999999999999965432 456778899999
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEEEe--cccCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCCeeE
Q 005473 558 VESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTL--EEHTQWITDVRFSPS-LSRLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 558 V~~v~fspdg~-~LaSgs~Dg~V~IWDl~t~~~~~~l--~~H~~~V~~v~~spd-g~~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
|++++|++++. +|++++.|++|+|||+++++++..+ ..|...|++++|+|+ +.+|++|+.|+.|++||+++++ ++
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~-~~ 262 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD-SA 262 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-GC
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc-Ee
Confidence 99999999875 7899999999999999998877654 457788999999997 5689999999999999999876 48
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
..+.+|...|++++|+|++..+|++|+.|++|+|||+++++++..+ +|.+.|++|+| +|
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vaf-sP 321 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAW-SP 321 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEE-CS
T ss_pred EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEE-eC
Confidence 8999999999999999998878999999999999999999888765 89999999999 98
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=2.3e-23 Score=223.54 Aligned_cols=184 Identities=24% Similarity=0.410 Sum_probs=161.2
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+.++.|++++ .++++|+.|++|++|+.... .....+..|.
T Consensus 61 ~gH~~~V~~~~~s~d~---------------~~l~s~s~Dg~v~vWd~~~~-------------------~~~~~~~~~~ 106 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDK---------------RRIVSSSQDGKVIVWDSFTT-------------------NKEHAVTMPC 106 (354)
T ss_dssp ECCSSCEEEEEECTTS---------------SEEEEEETTSEEEEEETTTC-------------------CEEEEEECSS
T ss_pred cCCCCeEEEEEECCCC---------------CEEEEEeCCCeEEEEECCCC-------------------CcceEEecCC
Confidence 4566788889998876 78999999999999965332 2345667788
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC------eEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESF------TVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENP 629 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~------~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~ 629 (695)
..|.+|+|+|+|.+|++|+.|+.|+||++... .....+.+|...|.+++|+|++..|++++.|++|++||++++
T Consensus 107 ~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~ 186 (354)
T 2pbi_B 107 TWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG 186 (354)
T ss_dssp SCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC
Confidence 89999999999999999999999999998643 345677889999999999999999999999999999999987
Q ss_pred CeeEEEEecCCCCeEEEEEecCC-CeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 630 DYSLRTFTGHSTTVMSLDFHPSK-EDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 630 ~~~l~~~~gh~~~V~sl~fspdg-~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+ ++..+.+|...|.+++|+|+. ..+|++|+.||.|++||+++++++..+.+|...|++|+| +|+
T Consensus 187 ~-~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~-~p~ 251 (354)
T 2pbi_B 187 Q-LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY-YPS 251 (354)
T ss_dssp C-EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-CTT
T ss_pred e-EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEE-eCC
Confidence 6 488999999999999999853 247889999999999999999999999999999999999 985
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.92 E-value=3e-23 Score=238.88 Aligned_cols=195 Identities=17% Similarity=0.315 Sum_probs=158.5
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCC--------------------------
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRD-------------------------- 531 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~-------------------------- 531 (695)
+...+.++.|+|++ +++++|+.|++|++|+.........
T Consensus 58 h~~~v~~~~~spdg---------------~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~ 122 (611)
T 1nr0_A 58 HSHQTTVAKTSPSG---------------YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVG 122 (611)
T ss_dssp CSSCEEEEEECTTS---------------SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEE
T ss_pred CCCceEEEEECCCC---------------cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEE
Confidence 44455666666655 8999999999999998743211000
Q ss_pred ------ccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEE
Q 005473 532 ------RVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVR 604 (695)
Q Consensus 532 ------~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~-~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~ 604 (695)
....+|+. + .....+.+|...|++|+|+|++. +|++|+.|++|+|||..+++++.++.+|...|++++
T Consensus 123 ~~~~~~~~v~~wd~--~---~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~ 197 (611)
T 1nr0_A 123 EGRERFGHVFLFDT--G---TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 197 (611)
T ss_dssp CCSSCSEEEEETTT--C---CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEE
T ss_pred CCCCceeEEEEeeC--C---CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEE
Confidence 01112221 1 23345789999999999999987 699999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEe-------cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEE
Q 005473 605 FSPSLSRLATSSADRTVRVWDTENPDYSLRTFT-------GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAG 677 (695)
Q Consensus 605 ~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~-------gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~ 677 (695)
|+|++.+|++|+.|++|+|||+.++.. +..+. +|.+.|++++|+|++. +|++|+.|++|++||+++++++.
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~g~~-~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEK 275 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEECCCcEEEEECCCCcE-eeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceee
Confidence 999999999999999999999998764 66663 7999999999999988 67799999999999999887654
Q ss_pred E-------------------------------------------EecCCCcEEEEEEeCCC
Q 005473 678 V-------------------------------------------FKNFFESFVSVRVVQPR 695 (695)
Q Consensus 678 ~-------------------------------------------~~~h~~~VtsVaf~sPd 695 (695)
+ +.+|...|++|+| +|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~-spd 335 (611)
T 1nr0_A 276 TIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSS-SAD 335 (611)
T ss_dssp EEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEE-CTT
T ss_pred eecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEE-eCC
Confidence 3 3479999999999 986
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.91 E-value=1.3e-23 Score=225.79 Aligned_cols=144 Identities=19% Similarity=0.288 Sum_probs=131.7
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCC
Q 005473 550 LIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTEN 628 (695)
Q Consensus 550 ~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~-~LaTgs~DgtIrvWDl~t 628 (695)
...+|.+.|++|+|+|++++|++|+.|++|+|||+++++++..+.+|...|++++|+|++. +|++++.|++|+|||+++
T Consensus 134 ~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 134 AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 3458999999999999999999999999999999999999999999999999999999864 789999999999999998
Q ss_pred CCeeEE--EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 629 PDYSLR--TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 629 ~~~~l~--~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++. +. .+..|...|++++|+|++..+|++|+.|+.|++||+++++++..+.+|...|++|+| +|+
T Consensus 214 ~~~-~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~-sp~ 280 (357)
T 4g56_B 214 PKP-ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAY-SYH 280 (357)
T ss_dssp SSC-BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEE-CSS
T ss_pred Cce-eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEE-cCC
Confidence 764 33 344577789999999998889999999999999999999999999999999999999 985
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=3.1e-23 Score=241.76 Aligned_cols=188 Identities=19% Similarity=0.274 Sum_probs=161.1
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
.|...+.++.|++++. +++++|+.|++|++|+...... ........+.+|..
T Consensus 380 ~H~~~V~~v~~~~~~~--------------~~l~s~s~D~~i~~W~~~~~~~--------------~~~~~~~~~~~h~~ 431 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNA--------------DIIVSASRDKSIILWKLTKDDK--------------AYGVAQRRLTGHSH 431 (694)
T ss_dssp CCSSCEEEEECCTTCC--------------SEEEEEETTSEEEEEECCCSTT--------------CSCEEEEEEECCSS
T ss_pred cCCceeEEEEecCCCC--------------CEEEEEeCCCcEEEEEccCCCc--------------ccccccceecCCCC
Confidence 4555666777666543 7899999999999997754321 01134567889999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF 636 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~ 636 (695)
.|.+|+|+|++++|++|+.|++|+|||+.++.++..+.+|...|++++|+|++.+|+||+.|++|+|||+.... ...+
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~--~~~~ 509 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC--KYTI 509 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--EEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc--ceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987532 2222
Q ss_pred ----ecCCCCeEEEEEecCCC-eEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 637 ----TGHSTTVMSLDFHPSKE-DLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 637 ----~gh~~~V~sl~fspdg~-~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.+|...|.+++|+|++. .++++|+.|++|+|||+++++++..+.+|.+.|++|+| +|+
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~-spd 572 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAV-SPD 572 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-CTT
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE-eCC
Confidence 46888999999999873 47889999999999999999999999999999999999 985
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=3.4e-24 Score=225.86 Aligned_cols=187 Identities=14% Similarity=0.155 Sum_probs=155.8
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+..+.|++++ +++++|+.|++|++|+...+ ....+..+.+|.
T Consensus 10 ~~H~~~V~~v~~s~~g---------------~~lasgs~D~~v~lwd~~~~-----------------~~~~~~~l~gH~ 57 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYG---------------TRLATCSSDRSVKIFDVRNG-----------------GQILIADLRGHE 57 (316)
T ss_dssp ----CCEEEEEECGGG---------------CEEEEEETTTEEEEEEEETT-----------------EEEEEEEEECCS
T ss_pred ccccCeEEEeeEcCCC---------------CEEEEEeCCCeEEEEEecCC-----------------CcEEEEEEcCCC
Confidence 3456788888998876 68999999999999965322 123456788999
Q ss_pred CCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCC--eEEEEecccCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCC
Q 005473 556 SKVESCHFSP--DGKLLATGGHDKKAVLWCTESF--TVKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVWDTENP 629 (695)
Q Consensus 556 ~~V~~v~fsp--dg~~LaSgs~Dg~V~IWDl~t~--~~~~~l~~H~~~V~~v~~spd--g~~LaTgs~DgtIrvWDl~t~ 629 (695)
+.|.+|+|++ ++++|++|+.|++|+|||++++ ..+..+.+|...|.+++|+|+ +.+|++|+.|++|++||++..
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 9999999986 4899999999999999999886 466778899999999999997 789999999999999999875
Q ss_pred Ce--eEEEEecCCCCeEEEEEecCC----------------CeEEEEEeCCCcEEEEECCCC---eEEEEEecCCCcEEE
Q 005473 630 DY--SLRTFTGHSTTVMSLDFHPSK----------------EDLLCSCDNNSEIRYWSINNG---SCAGVFKNFFESFVS 688 (695)
Q Consensus 630 ~~--~l~~~~gh~~~V~sl~fspdg----------------~~llaSgs~Dg~IriWDl~tg---~~v~~~~~h~~~Vts 688 (695)
.. ....+.+|...|.+++|+|+. ..+|++|+.|+.|++||++.+ +++..+.+|.+.|.+
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 138 GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp SCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred CCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE
Confidence 42 235567899999999999973 136789999999999999865 578889999999999
Q ss_pred EEEeCCC
Q 005473 689 VRVVQPR 695 (695)
Q Consensus 689 Vaf~sPd 695 (695)
|+| +|+
T Consensus 218 v~~-sp~ 223 (316)
T 3bg1_A 218 VAW-APS 223 (316)
T ss_dssp EEC-CCC
T ss_pred EEe-cCC
Confidence 999 985
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.91 E-value=1.4e-22 Score=211.43 Aligned_cols=155 Identities=19% Similarity=0.401 Sum_probs=121.0
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
.+++++|+.|+.|++|+...+ ..+..+.+|...|.+++|+|++++|++|+.|+.|+|||++
T Consensus 77 ~~~l~s~~~d~~i~vwd~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 77 SNLLVSASDDKTLKIWDVSSG-------------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp SSEEEEEETTSEEEEEETTTC-------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCEEEEECCCCEEEEEECCCC-------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 478999999999999976432 3456778999999999999999999999999999999999
Q ss_pred CCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcE
Q 005473 586 SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEI 665 (695)
Q Consensus 586 t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~I 665 (695)
+++++..+..|...|.+++|+|++.+|++++.|+.|++||++++.........+...|.+++|+|++. +|++++.|+.|
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i 216 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTL 216 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEE
T ss_pred CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeE
Confidence 99999999999999999999999999999999999999999986642223344556677777777654 23344444444
Q ss_pred EEEECCCCeEEEEEe
Q 005473 666 RYWSINNGSCAGVFK 680 (695)
Q Consensus 666 riWDl~tg~~v~~~~ 680 (695)
++||+++++++..+.
T Consensus 217 ~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 217 KLWDYSKGKCLKTYT 231 (312)
T ss_dssp EEEETTTTEEEEEEC
T ss_pred EEEECCCCcEEEEEE
Confidence 444444444333333
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=3.7e-23 Score=223.66 Aligned_cols=203 Identities=18% Similarity=0.294 Sum_probs=165.7
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCC--------------------------C
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDAD--------------------------P 529 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~--------------------------~ 529 (695)
..+...+..+.|+|++ +++++|+.|++|++|+...+.. +
T Consensus 63 ~gH~~~V~~~~~sp~~---------------~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~ 127 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEK---------------NWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGG 127 (380)
T ss_dssp CCCSSCEEEEEECTTS---------------SCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECC
T ss_pred cccccEEEEEEEcCCC---------------CEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEee
Confidence 3456788999999877 6789999999999998754321 1
Q ss_pred CCccccccccCCC----ceeeeEEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEe-----cccCCC
Q 005473 530 RDRVGRSAEVGKG----FTFTEFQLIPASTSKVESCHFSPDG-KLLATGGHDKKAVLWCTESFTVKSTL-----EEHTQW 599 (695)
Q Consensus 530 ~~~~~~~~d~~~~----~~~~~v~~l~~H~~~V~~v~fspdg-~~LaSgs~Dg~V~IWDl~t~~~~~~l-----~~H~~~ 599 (695)
.+...++|+.... ........+.+|.+.|.+|.|+|++ ..|++|+.|++|+|||+++++++..+ .+|...
T Consensus 128 ~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~ 207 (380)
T 3iz6_a 128 LDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTAD 207 (380)
T ss_dssp SSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSC
T ss_pred CCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccC
Confidence 1222334433221 1112345578999999999999974 57999999999999999999998887 689999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEE
Q 005473 600 ITDVRFSP-SLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGV 678 (695)
Q Consensus 600 V~~v~~sp-dg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~ 678 (695)
|.+++|++ ++.+|++|+.|++|++||++....++..+.+|.+.|.+++|+|++. +|++|+.||+|++||+++++++..
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEE
Confidence 99999987 7899999999999999999866667899999999999999999988 677999999999999999999998
Q ss_pred EecCCC-------cEEEEEEeCCC
Q 005473 679 FKNFFE-------SFVSVRVVQPR 695 (695)
Q Consensus 679 ~~~h~~-------~VtsVaf~sPd 695 (695)
+..+.. .|++++| +|+
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~-s~~ 309 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAF-SIS 309 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEE-CSS
T ss_pred ecccccccccccCceEEEEE-CCC
Confidence 876533 4899999 985
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=6.3e-23 Score=221.84 Aligned_cols=216 Identities=19% Similarity=0.235 Sum_probs=165.4
Q ss_pred cccCCCCCceEEEEecCCCccc--------cccCCccCCCCcEEEEeeCCCcEEEEeCCCCCC-----------------
Q 005473 474 LQHNGASSKSLLMFGSDGMGSL--------TSAPNQLTDMDRFVDDGSLDDNVESFLSPDDAD----------------- 528 (695)
Q Consensus 474 l~~s~s~~~s~l~~~~dg~~~l--------a~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~----------------- 528 (695)
..++++.+.++..|.......+ .+....+.+...++++|+.|+.|++|+......
T Consensus 80 ~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~ 159 (380)
T 3iz6_a 80 WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGY 159 (380)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSC
T ss_pred EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcc
Confidence 4455667777777776443111 111112344557888888888888887542110
Q ss_pred -----------------CCCccccccccCCCceeeeEEEe-----cCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC
Q 005473 529 -----------------PRDRVGRSAEVGKGFTFTEFQLI-----PASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 529 -----------------~~~~~~~~~d~~~~~~~~~v~~l-----~~H~~~V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~ 585 (695)
..+...++|+...+. .+..+ .+|...|.+++|++ ++++|++|+.|++|+|||++
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~ 236 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ---RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLR 236 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCC---EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETT
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCc---EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECC
Confidence 112233455555443 23333 67999999999987 88999999999999999998
Q ss_pred -CCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCC-------CCeEEEEEecCCCeEEE
Q 005473 586 -SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHS-------TTVMSLDFHPSKEDLLC 657 (695)
Q Consensus 586 -t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~-------~~V~sl~fspdg~~lla 657 (695)
...++..+.+|.+.|++++|+|++.+|++|+.|++|+|||++++. ++..+..+. ..|++++|+|+|. +++
T Consensus 237 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 314 (380)
T 3iz6_a 237 ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH-QLQVYNREPDRNDNELPIVTSVAFSISGR-LLF 314 (380)
T ss_dssp TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE-EEEEECCCCSSSCCSSCSCSEEEECSSSS-EEE
T ss_pred CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc-EEEEecccccccccccCceEEEEECCCCC-EEE
Confidence 557888999999999999999999999999999999999999865 466665543 2489999999998 667
Q ss_pred EEeCCCcEEEEECCCCeEEEEE----ecCCCcEEEEEEeCCC
Q 005473 658 SCDNNSEIRYWSINNGSCAGVF----KNFFESFVSVRVVQPR 695 (695)
Q Consensus 658 Sgs~Dg~IriWDl~tg~~v~~~----~~h~~~VtsVaf~sPd 695 (695)
+|+.||.|++||+.+++++..+ .+|.+.|++|+| +|+
T Consensus 315 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~-s~d 355 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGL-SSD 355 (380)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEE-CSS
T ss_pred EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEE-CCC
Confidence 9999999999999999998888 689999999999 986
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.91 E-value=1.7e-22 Score=219.52 Aligned_cols=177 Identities=24% Similarity=0.415 Sum_probs=152.5
Q ss_pred CceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEE
Q 005473 481 SKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVES 560 (695)
Q Consensus 481 ~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~ 560 (695)
.+..+.|++++ +++++|+.|++|++|+.... ..+..+.+|...|.+
T Consensus 125 ~v~~v~~s~dg---------------~~l~s~~~d~~i~iwd~~~~-------------------~~~~~~~~h~~~v~~ 170 (393)
T 1erj_A 125 YIRSVCFSPDG---------------KFLATGAEDRLIRIWDIENR-------------------KIVMILQGHEQDIYS 170 (393)
T ss_dssp BEEEEEECTTS---------------SEEEEEETTSCEEEEETTTT-------------------EEEEEECCCSSCEEE
T ss_pred eEEEEEECCCC---------------CEEEEEcCCCeEEEEECCCC-------------------cEEEEEccCCCCEEE
Confidence 46678888776 78999999999999976432 355678899999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCeeEEEE---
Q 005473 561 CHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDTENPDYSLRTF--- 636 (695)
Q Consensus 561 v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~sp-dg~~LaTgs~DgtIrvWDl~t~~~~l~~~--- 636 (695)
++|+|++++|++|+.|++|+|||++++++...+. +...|.+++|+| ++.+|++|+.|++|++||++++.. +..+
T Consensus 171 ~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~-~~~~~~~ 248 (393)
T 1erj_A 171 LDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL-VERLDSE 248 (393)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE-EEEEC--
T ss_pred EEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-EEeeccc
Confidence 9999999999999999999999999999887776 567899999999 899999999999999999998664 5544
Q ss_pred ----ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC------------CeEEEEEecCCCcEEEEEEeCCC
Q 005473 637 ----TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN------------GSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 637 ----~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t------------g~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.+|...|++++|+|++. +|++|+.|+.|++||+++ +.+...+.+|.+.|.+++| +|+
T Consensus 249 ~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~ 321 (393)
T 1erj_A 249 NESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT-TQN 321 (393)
T ss_dssp ----CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE-CGG
T ss_pred ccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEE-CCC
Confidence 67999999999999998 667999999999999975 4567788899999999999 874
No 32
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=1.3e-22 Score=213.11 Aligned_cols=190 Identities=21% Similarity=0.323 Sum_probs=158.2
Q ss_pred cccCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecC
Q 005473 474 LQHNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPA 553 (695)
Q Consensus 474 l~~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~ 553 (695)
+...+...+.++.|+++.. ...++++|+.|+.|++|+..... ......+.+
T Consensus 34 ~~~~h~~~v~~~~~~~~~~------------~g~~l~~~~~dg~i~iw~~~~~~-----------------~~~~~~~~~ 84 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTL------------PGNFLIAGSWANDVRCWEVQDSG-----------------QTIPKAQQM 84 (368)
T ss_dssp CSSCCSSCEEEEEECCTTS------------SSEEEEEEETTSEEEEEEECTTS-----------------CEEEEEEEE
T ss_pred eccCCCCceEEEEEcCCCC------------CceEEEEECCCCcEEEEEcCCCC-----------------ceeEEEecc
Confidence 4455678899999999741 01789999999999999764321 123366778
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEE--cCCCCEEEEEeCCCeEEEEECCCCCe
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRF--SPSLSRLATSSADRTVRVWDTENPDY 631 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~--spdg~~LaTgs~DgtIrvWDl~t~~~ 631 (695)
|...|++++|+|++++|++|+.||.|+|||+++++++. +.+|...|++++| +|++.+|++++.|+.|++||+++++.
T Consensus 85 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 85 HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred ccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 99999999999999999999999999999999988776 5679999999999 88999999999999999999876431
Q ss_pred --------------------------------------------------------------------------------
Q 005473 632 -------------------------------------------------------------------------------- 631 (695)
Q Consensus 632 -------------------------------------------------------------------------------- 631 (695)
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 164 MMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred EEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence
Q ss_pred ---------eEEEEecCCC------------CeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEE
Q 005473 632 ---------SLRTFTGHST------------TVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVR 690 (695)
Q Consensus 632 ---------~l~~~~gh~~------------~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVa 690 (695)
.+..+.+|.. .|++++|+|++. +|++|+.||.|++||+++++++..+.+|..+|++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 322 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACC 322 (368)
T ss_dssp ESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEE
T ss_pred ecCCCCccccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEE
Confidence 0112234433 699999999987 566999999999999999999999999999999999
Q ss_pred EeCCC
Q 005473 691 VVQPR 695 (695)
Q Consensus 691 f~sPd 695 (695)
| +|+
T Consensus 323 ~-s~~ 326 (368)
T 3mmy_A 323 F-NHN 326 (368)
T ss_dssp E-CTT
T ss_pred E-CCC
Confidence 9 986
No 33
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=8.5e-23 Score=235.11 Aligned_cols=183 Identities=24% Similarity=0.370 Sum_probs=158.6
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|+|++. ..+++|+.|++|++|+... .+.+..+.+|.+.
T Consensus 146 h~~~v~~v~f~p~~~--------------~~l~s~s~D~~v~lwd~~~-------------------~~~~~~l~~H~~~ 192 (611)
T 1nr0_A 146 QARAMNSVDFKPSRP--------------FRIISGSDDNTVAIFEGPP-------------------FKFKSTFGEHTKF 192 (611)
T ss_dssp CSSCEEEEEECSSSS--------------CEEEEEETTSCEEEEETTT-------------------BEEEEEECCCSSC
T ss_pred CCCCceEEEECCCCC--------------eEEEEEeCCCeEEEEECCC-------------------CeEeeeeccccCc
Confidence 445778888888764 4689999999999995421 2456778999999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEec-------ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC
Q 005473 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE-------EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD 630 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~-------~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~ 630 (695)
|.+|+|+|+|++|++|+.|++|+|||+.+++++..+. +|.+.|++++|+|++.+|++++.|++|+|||+++++
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 9999999999999999999999999999999988884 799999999999999999999999999999998754
Q ss_pred e------------------------------------------eEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEE
Q 005473 631 Y------------------------------------------SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYW 668 (695)
Q Consensus 631 ~------------------------------------------~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriW 668 (695)
. ++..+.+|...|++++|+|+|. +|++|+.|+.|++|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~W 351 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSW 351 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEE
Confidence 2 1234568999999999999998 66799999999999
Q ss_pred ECCCCeEEEEE-ecCCCcEEEEEEeCCC
Q 005473 669 SINNGSCAGVF-KNFFESFVSVRVVQPR 695 (695)
Q Consensus 669 Dl~tg~~v~~~-~~h~~~VtsVaf~sPd 695 (695)
|+.++++...+ .+|...|.+++| +|+
T Consensus 352 d~~~~~~~~~~~~~h~~~v~~~~~-s~~ 378 (611)
T 1nr0_A 352 DISTGISNRVFPDVHATMITGIKT-TSK 378 (611)
T ss_dssp ETTTCCEEECSSCSCSSCEEEEEE-CTT
T ss_pred ECCCCceeeecccCCcceEEEEEE-CCC
Confidence 99999988877 589999999999 763
No 34
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=1.1e-23 Score=231.64 Aligned_cols=184 Identities=11% Similarity=0.134 Sum_probs=153.4
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...++++.|+|... .+|++|+.|++|++|+...+. ...+..+.+|.+.
T Consensus 118 ~~~~V~~l~~~P~~~--------------~~lasGs~dg~i~lWd~~~~~-----------------~~~~~~~~gH~~~ 166 (435)
T 4e54_B 118 FDRRATSLAWHPTHP--------------STVAVGSKGGDIMLWNFGIKD-----------------KPTFIKGIGAGGS 166 (435)
T ss_dssp CSSCEEEEEECSSCT--------------TCEEEEETTSCEEEECSSCCS-----------------CCEEECCCSSSCC
T ss_pred CCCCEEEEEEeCCCC--------------CEEEEEeCCCEEEEEECCCCC-----------------ceeEEEccCCCCC
Confidence 345688999998654 789999999999999764331 1233456789999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEecc--cCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEE
Q 005473 558 VESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEE--HTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLR 634 (695)
Q Consensus 558 V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~--H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~ 634 (695)
|++|+|+| ++++|++|+.||+|+|||+++......... +...|.+++|+|++.+|++|+.||+|++||++. + ++.
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~-~~~ 244 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-K-ELW 244 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-C-BCC
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-c-eeE
Confidence 99999998 789999999999999999987655444433 345678999999999999999999999999975 3 467
Q ss_pred EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEE---ecCCCcEEEEEEeCCC
Q 005473 635 TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF---KNFFESFVSVRVVQPR 695 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~---~~h~~~VtsVaf~sPd 695 (695)
.+.+|...|++++|+|+++.+|++|+.|+.|+|||+++++....+ .+|..+|++|+| +|+
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~-spd 307 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACF-SPD 307 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCB-CTT
T ss_pred EEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeE-CCC
Confidence 888999999999999999989999999999999999987654433 589999999999 986
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.91 E-value=2.9e-22 Score=217.53 Aligned_cols=167 Identities=23% Similarity=0.350 Sum_probs=143.7
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCT 584 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fsp-dg~~LaSgs~Dg~V~IWDl 584 (695)
..++++|+.|++|++|+...+ .....+. +...|.+++|+| ++++|++|+.|++|+|||+
T Consensus 177 ~~~l~s~s~d~~v~iwd~~~~-------------------~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~ 236 (393)
T 1erj_A 177 GDKLVSGSGDRTVRIWDLRTG-------------------QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDS 236 (393)
T ss_dssp SSEEEEEETTSEEEEEETTTT-------------------EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEET
T ss_pred CCEEEEecCCCcEEEEECCCC-------------------eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence 378899999999999976432 1222232 456799999999 8999999999999999999
Q ss_pred CCCeEEEEe-------cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC-----------eeEEEEecCCCCeEEE
Q 005473 585 ESFTVKSTL-------EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD-----------YSLRTFTGHSTTVMSL 646 (695)
Q Consensus 585 ~t~~~~~~l-------~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~-----------~~l~~~~gh~~~V~sl 646 (695)
++++++..+ .+|...|++++|+|++.+|++|+.|++|++||+++.. .+...+.+|...|.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 316 (393)
T 1erj_A 237 ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 316 (393)
T ss_dssp TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEE
T ss_pred CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEE
Confidence 999888776 5799999999999999999999999999999997532 3467788999999999
Q ss_pred EEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 647 DFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 647 ~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
+|+|++. +|++|+.|+.|++||+++++++..+.+|.+.|.+|+| +|
T Consensus 317 ~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~-~~ 362 (393)
T 1erj_A 317 ATTQNDE-YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV-AN 362 (393)
T ss_dssp EECGGGC-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-CS
T ss_pred EECCCCC-EEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEe-cC
Confidence 9999987 6679999999999999999999999999999999999 75
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.91 E-value=2.3e-22 Score=213.85 Aligned_cols=165 Identities=22% Similarity=0.407 Sum_probs=138.9
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
..++++|+.|++|++|+...+ ..+..+.+|...|.+|+|+|++++|++|+.|++|+|||+.
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~-------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTG-------------------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSS-------------------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred CCEEEEEcCCCcEEEEECCCC-------------------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 378999999999999976432 3456788999999999999999999999999999999998
Q ss_pred CCeEEEEec---ccCCCeEEEEEcCCC----------CEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCC
Q 005473 586 SFTVKSTLE---EHTQWITDVRFSPSL----------SRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSK 652 (695)
Q Consensus 586 t~~~~~~l~---~H~~~V~~v~~spdg----------~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg 652 (695)
.. ....+. +|...|.+++|+|++ .+|++++.|++|++||.. ...+..+.+|...|.+++|+|+|
T Consensus 149 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 149 GE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNG 225 (343)
T ss_dssp SC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTS
T ss_pred CC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCC
Confidence 43 333333 789999999999986 789999999999999954 34577889999999999999999
Q ss_pred CeEEEEEeCCCcEEEEECCC-CeEEEEEecCCCcEEEEEEeCCC
Q 005473 653 EDLLCSCDNNSEIRYWSINN-GSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 653 ~~llaSgs~Dg~IriWDl~t-g~~v~~~~~h~~~VtsVaf~sPd 695 (695)
. +|++|+.||.|++||++. ..+...+ .+...|.+|+| +|+
T Consensus 226 ~-~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~-sp~ 266 (343)
T 2xzm_R 226 K-YIATGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAF-NPK 266 (343)
T ss_dssp S-EEEEEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEE-CSS
T ss_pred C-EEEEEcCCCeEEEEECCCCcccceee-cCCCcEEEEEE-CCC
Confidence 8 677999999999999954 4455555 35567999999 985
No 37
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=8.7e-24 Score=225.47 Aligned_cols=182 Identities=17% Similarity=0.192 Sum_probs=148.2
Q ss_pred CCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCe
Q 005473 479 ASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKV 558 (695)
Q Consensus 479 s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V 558 (695)
...+..+.|++++ +++++|+.|+.|++|+...+ .+..+..+.+|...|
T Consensus 11 ~~~v~~~~~s~~g---------------~~l~~~~~d~~i~iw~~~~~-----------------~~~~~~~~~~h~~~v 58 (377)
T 3dwl_C 11 PKPSYEHAFNSQR---------------TEFVTTTATNQVELYEQDGN-----------------GWKHARTFSDHDKIV 58 (377)
T ss_dssp SSCCSCCEECSSS---------------SEEECCCSSSCBCEEEEETT-----------------EEEECCCBCCCSSCE
T ss_pred CCcEEEEEECCCC---------------CEEEEecCCCEEEEEEccCC-----------------ceEEEEEEecCCceE
Confidence 3456666677655 78999999999999965322 124556678999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCe---EEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCe--eE
Q 005473 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFT---VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDY--SL 633 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~---~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~--~l 633 (695)
.+++|+|++++|++|+.|++|+|||+.+++ ....+.+|...|++++|+|++.+|++++.|++|++||++++.. ++
T Consensus 59 ~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 138 (377)
T 3dwl_C 59 TCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVS 138 (377)
T ss_dssp EEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCC
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceee
Confidence 999999999999999999999999999877 6778889999999999999999999999999999999998653 46
Q ss_pred EEEec-CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC------------------CCeEEEEEecCCCcEEEEEEeCC
Q 005473 634 RTFTG-HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN------------------NGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~g-h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~------------------tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
..+.+ |...|++++|+|++. +|++|+.|+.|++||++ .++++..+ +|.+.|++++| +|
T Consensus 139 ~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~-sp 215 (377)
T 3dwl_C 139 KHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF-SP 215 (377)
T ss_dssp EEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE-CT
T ss_pred eEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE-CC
Confidence 77777 999999999999987 67799999999999985 46677788 99999999999 98
Q ss_pred C
Q 005473 695 R 695 (695)
Q Consensus 695 d 695 (695)
+
T Consensus 216 ~ 216 (377)
T 3dwl_C 216 S 216 (377)
T ss_dssp T
T ss_pred C
Confidence 6
No 38
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.91 E-value=1.6e-22 Score=210.97 Aligned_cols=172 Identities=16% Similarity=0.300 Sum_probs=143.5
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEE
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWC 583 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd--g~~LaSgs~Dg~V~IWD 583 (695)
..++++|+.|++|++|+...+. ...+..+.+|...|.+++|+|+ +.+|++|+.|++|+|||
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~-----------------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd 129 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGR-----------------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVE 129 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSC-----------------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCEEEEEcCCCEEEEEEcCCCc-----------------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEE
Confidence 3789999999999999764321 1234556789999999999997 89999999999999999
Q ss_pred CCCCe--EEEEecccCCCeEEEEEcCC-------------CCEEEEEeCCCeEEEEECCCCCe---eEEEEecCCCCeEE
Q 005473 584 TESFT--VKSTLEEHTQWITDVRFSPS-------------LSRLATSSADRTVRVWDTENPDY---SLRTFTGHSTTVMS 645 (695)
Q Consensus 584 l~t~~--~~~~l~~H~~~V~~v~~spd-------------g~~LaTgs~DgtIrvWDl~t~~~---~l~~~~gh~~~V~s 645 (695)
+++.. ....+.+|...|.+++|+|+ +.+|++|+.|++|+|||++++.. ++..+.+|...|.+
T Consensus 130 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~ 209 (297)
T 2pm7_B 130 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (297)
T ss_dssp BCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred ecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEE
Confidence 98753 24577899999999999996 46999999999999999987552 45788999999999
Q ss_pred EEEecCC--CeEEEEEeCCCcEEEEECCCCe---EEEEE--ecCCCcEEEEEEeCCC
Q 005473 646 LDFHPSK--EDLLCSCDNNSEIRYWSINNGS---CAGVF--KNFFESFVSVRVVQPR 695 (695)
Q Consensus 646 l~fspdg--~~llaSgs~Dg~IriWDl~tg~---~v~~~--~~h~~~VtsVaf~sPd 695 (695)
|+|+|++ ..+|++|+.|++|+|||++++. ....+ ..|...|.+++| +|+
T Consensus 210 v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~ 265 (297)
T 2pm7_B 210 VAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASW-SLS 265 (297)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEE-CSS
T ss_pred EEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEE-CCC
Confidence 9999996 4588899999999999998743 22333 478899999999 985
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.6e-22 Score=212.14 Aligned_cols=186 Identities=16% Similarity=0.212 Sum_probs=160.9
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+..+.|++++ .++++|+.|+.|++|+... .....+..+.+|.
T Consensus 8 ~~h~~~v~~~~~s~~~---------------~~l~~~~~dg~i~iw~~~~-----------------~~~~~~~~~~~h~ 55 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYG---------------KRLATCSSDKTIKIFEVEG-----------------ETHKLIDTLTGHE 55 (379)
T ss_dssp EECCCCEEEEEECSSS---------------SEEEEEETTSCEEEEEEET-----------------TEEEEEEEECCCS
T ss_pred cCCcccEEEEEEcCCC---------------CEEEEEECCCcEEEEecCC-----------------CcceeeeEecCCC
Confidence 3456788888898876 7899999999999996531 1335667888999
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--EEEEecccCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCC
Q 005473 556 SKVESCHFSPD--GKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVWDTENP 629 (695)
Q Consensus 556 ~~V~~v~fspd--g~~LaSgs~Dg~V~IWDl~t~~--~~~~l~~H~~~V~~v~~spd--g~~LaTgs~DgtIrvWDl~t~ 629 (695)
..|++++|+++ +++|++|+.||.|+|||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+++.
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 99999999987 9999999999999999999987 77788889999999999999 999999999999999999886
Q ss_pred C-eeEEEEecCCCCeEEEEEec-------------CCCeEEEEEeCCCcEEEEECCCCe----EEEEEecCCCcEEEEEE
Q 005473 630 D-YSLRTFTGHSTTVMSLDFHP-------------SKEDLLCSCDNNSEIRYWSINNGS----CAGVFKNFFESFVSVRV 691 (695)
Q Consensus 630 ~-~~l~~~~gh~~~V~sl~fsp-------------dg~~llaSgs~Dg~IriWDl~tg~----~v~~~~~h~~~VtsVaf 691 (695)
. .....+.+|...|++++|+| ++. +|++|+.||.|++||++++. ++..+.+|...|++++|
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 4 23557788999999999999 455 77799999999999998753 56788899999999999
Q ss_pred eCCC
Q 005473 692 VQPR 695 (695)
Q Consensus 692 ~sPd 695 (695)
+|+
T Consensus 215 -sp~ 217 (379)
T 3jrp_A 215 -SPT 217 (379)
T ss_dssp -CCC
T ss_pred -CCC
Confidence 985
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=6.8e-22 Score=206.42 Aligned_cols=191 Identities=18% Similarity=0.226 Sum_probs=168.5
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...++.+.|+|++. +++++|+.|++|++|+..... .....+...+.+|.
T Consensus 35 ~GH~~~V~~v~~sp~~~--------------~~l~S~s~D~~i~vWd~~~~~--------------~~~~~~~~~l~~h~ 86 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFP--------------DMILSASRDKTIIMWKLTRDE--------------TNYGIPQRALRGHS 86 (340)
T ss_dssp CCCSSCEEEEEECTTCT--------------TEEEEEETTSCEEEEEECCSS--------------SCSEEEEEEECCCS
T ss_pred CCccCCEEEEEEeCCCC--------------CEEEEEcCCCeEEEEECCCCC--------------cccceeeEEEeCCC
Confidence 35677889999998754 789999999999999775432 11234567789999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
..|.+++|+|++++|++|+.|+.|++|+............+...+..+.+++++.+|++++.|+.+++||+.........
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999876665566
Q ss_pred EecCCCCeEEEEEecCCC-eEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTGHSTTVMSLDFHPSKE-DLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~~V~sl~fspdg~-~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
..+|...|.+++|++++. .++++|+.|+.|++||+++++++..+.+|.+.|++|+| +|+
T Consensus 167 ~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~-s~~ 226 (340)
T 4aow_A 167 DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTV-SPD 226 (340)
T ss_dssp SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-CTT
T ss_pred eccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEE-CCC
Confidence 778999999999998754 46789999999999999999999999999999999999 985
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.90 E-value=2.2e-23 Score=222.33 Aligned_cols=184 Identities=15% Similarity=0.109 Sum_probs=149.5
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|++++ +++++++.|++|++|+...+. .+.....+.+|...
T Consensus 54 h~~~v~~~~~s~~~---------------~~l~s~s~d~~v~vwd~~~~~----------------~~~~~~~~~~~~~~ 102 (377)
T 3dwl_C 54 HDKIVTCVDWAPKS---------------NRIVTCSQDRNAYVYEKRPDG----------------TWKQTLVLLRLNRA 102 (377)
T ss_dssp CSSCEEEEEECTTT---------------CCEEEEETTSSEEEC----------------------CCCCEEECCCCSSC
T ss_pred CCceEEEEEEeCCC---------------CEEEEEeCCCeEEEEEcCCCC----------------ceeeeeEecccCCc
Confidence 34556666776654 678999999999999764331 12345667789999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---EEEEecc-cCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC----
Q 005473 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFT---VKSTLEE-HTQWITDVRFSPSLSRLATSSADRTVRVWDTENP---- 629 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~---~~~~l~~-H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~---- 629 (695)
|.+++|+|++++|++|+.|+.|+|||+++++ +...+.+ |...|++++|+|++.+|++++.|++|++||++..
T Consensus 103 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-
T ss_pred eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCC
Confidence 9999999999999999999999999999877 4677877 9999999999999999999999999999998632
Q ss_pred -------------CeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeE----EEEEecCCCcEEEEEEe
Q 005473 630 -------------DYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSC----AGVFKNFFESFVSVRVV 692 (695)
Q Consensus 630 -------------~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~----v~~~~~h~~~VtsVaf~ 692 (695)
..++..+ +|.+.|++++|+|++. +|++|+.||.|++||++++++ +..+.+|..+|++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~- 259 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLW- 259 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEE-
T ss_pred Cccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEE-
Confidence 2245566 8999999999999998 666999999999999999987 8889999999999999
Q ss_pred CCC
Q 005473 693 QPR 695 (695)
Q Consensus 693 sPd 695 (695)
+|+
T Consensus 260 s~~ 262 (377)
T 3dwl_C 260 ANE 262 (377)
T ss_dssp EET
T ss_pred cCC
Confidence 875
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=3.6e-22 Score=225.28 Aligned_cols=166 Identities=27% Similarity=0.466 Sum_probs=148.4
Q ss_pred CCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 005473 504 DMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWC 583 (695)
Q Consensus 504 ~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWD 583 (695)
+..+++++++.|+.|++|+.. + ..+..+.+|...|++++|+|++++|++++.|++|+|||
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~-----------------~---~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRN-----------------G---QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN 454 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTT-----------------C---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCC-----------------C---CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 344789999999999999531 1 24567789999999999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 584 TESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 584 l~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
. +++.+..+.+|...|++++|+|++.+|++++.|++|++||.. ++ ++..+.+|...|++|+|+|+++ +|++++.||
T Consensus 455 ~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~-~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg 530 (577)
T 2ymu_A 455 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ-LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDK 530 (577)
T ss_dssp T-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC-EEEEEECCSSCEEEEEECTTSS-CEEEEETTS
T ss_pred C-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC-EEEEEeCCCCCEEEEEEcCCCC-EEEEEECcC
Confidence 6 567888999999999999999999999999999999999964 34 5889999999999999999998 566999999
Q ss_pred cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 664 EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|++||+ +++++.++.+|.+.|++|+| +||
T Consensus 531 ~v~lwd~-~~~~~~~~~~h~~~v~~~~f-s~d 560 (577)
T 2ymu_A 531 TVKLWNR-NGQLLQTLTGHSSSVWGVAF-SPD 560 (577)
T ss_dssp EEEEECT-TSCEEEEEECCSSCEEEEEE-CTT
T ss_pred EEEEEeC-CCCEEEEEcCCCCCEEEEEE-cCC
Confidence 9999995 68999999999999999999 986
No 43
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=4.5e-22 Score=218.69 Aligned_cols=191 Identities=19% Similarity=0.310 Sum_probs=163.0
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|++++. .++++|+.|+.|++|+...... ..........+.+|...
T Consensus 180 h~~~v~~l~~~~~~~--------------~~l~s~~~dg~i~vwd~~~~~~------------~~~~~~~~~~~~~h~~~ 233 (430)
T 2xyi_A 180 HQKEGYGLSWNPNLN--------------GYLLSASDDHTICLWDINATPK------------EHRVIDAKNIFTGHTAV 233 (430)
T ss_dssp CSSCCCCEEECTTST--------------TEEEEECTTSCEEEEETTSCCB------------GGGEEECSEEECCCSSC
T ss_pred CCCCeEEEEeCCCCC--------------CeEEEEeCCCeEEEEeCCCCCC------------CCceeccceeecCCCCC
Confidence 445667777777663 4899999999999998755321 11122335667799999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEECCCC---eEEEEecccCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCee
Q 005473 558 VESCHFSP-DGKLLATGGHDKKAVLWCTESF---TVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTENPDYS 632 (695)
Q Consensus 558 V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~---~~~~~l~~H~~~V~~v~~spdg~-~LaTgs~DgtIrvWDl~t~~~~ 632 (695)
|.+++|+| ++.+|++++.|+.|+|||+++. +++..+..|...|++++|+|++. +|++|+.||+|++||+++...+
T Consensus 234 v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~ 313 (430)
T 2xyi_A 234 VEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK 313 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC
T ss_pred EeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC
Confidence 99999999 6789999999999999999987 57778889999999999999876 7899999999999999986667
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC--------------CeEEEEEecCCCcEEEEEEeCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN--------------GSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t--------------g~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+..+.+|...|++++|+|+++.+|++|+.|+.|+|||+.. .+++..+.+|...|++++| +|+
T Consensus 314 ~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~p~ 389 (430)
T 2xyi_A 314 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW-NPN 389 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEE-CSS
T ss_pred eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEE-CCC
Confidence 8999999999999999999988899999999999999987 3678888899999999999 985
No 44
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=1.9e-22 Score=219.57 Aligned_cols=193 Identities=15% Similarity=0.281 Sum_probs=156.9
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC--
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST-- 555 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~-- 555 (695)
....++++.|++++ .++++|+.|+.|++|+....... .......+..+..+.+|.
T Consensus 27 ~~~~V~~v~~s~~g---------------~~la~g~~dg~v~iw~~~~~~~~--------~~~~~~~~~~~~~~~~h~~~ 83 (447)
T 3dw8_B 27 EADIISTVEFNHSG---------------ELLATGDKGGRVVIFQQEQENKI--------QSHSRGEYNVYSTFQSHEPE 83 (447)
T ss_dssp GGGSEEEEEECSSS---------------SEEEEEETTSEEEEEEECC-------------CCCCCCEEEEEEEECCCCE
T ss_pred ccCcEEEEEECCCC---------------CEEEEEcCCCeEEEEEecCCCCC--------CcccccceeEeccccccccc
Confidence 34678899999877 78999999999999987654210 011122345677888998
Q ss_pred ----------CCeEEEEEcCCC--CEEEEEeCCCcEEEEECCCCeEE---------------------------------
Q 005473 556 ----------SKVESCHFSPDG--KLLATGGHDKKAVLWCTESFTVK--------------------------------- 590 (695)
Q Consensus 556 ----------~~V~~v~fspdg--~~LaSgs~Dg~V~IWDl~t~~~~--------------------------------- 590 (695)
+.|++++|+|++ .+|++++.|++|+|||+.++...
T Consensus 84 ~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 163 (447)
T 3dw8_B 84 FDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLM 163 (447)
T ss_dssp EEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEE
T ss_pred ccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchhee
Confidence 889999999998 79999999999999999764432
Q ss_pred ------EE-ecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEE-------EEecCCCCeEEEEEecCCCeEE
Q 005473 591 ------ST-LEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLR-------TFTGHSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 591 ------~~-l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~-------~~~gh~~~V~sl~fspdg~~ll 656 (695)
.. +.+|...|++++|+|++.+|++| .|++|++||+++...++. .+.+|...|++++|+|++..+|
T Consensus 164 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 242 (447)
T 3dw8_B 164 VEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTF 242 (447)
T ss_dssp EEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEE
T ss_pred eeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEE
Confidence 12 36899999999999999999998 799999999996554444 2568999999999999985588
Q ss_pred EEEeCCCcEEEEECCCCeE----EEEEecCCC------------cEEEEEEeCCC
Q 005473 657 CSCDNNSEIRYWSINNGSC----AGVFKNFFE------------SFVSVRVVQPR 695 (695)
Q Consensus 657 aSgs~Dg~IriWDl~tg~~----v~~~~~h~~------------~VtsVaf~sPd 695 (695)
++|+.||.|++||++++++ +..+.+|.. .|++|+| +|+
T Consensus 243 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~ 296 (447)
T 3dw8_B 243 VYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKF-SHS 296 (447)
T ss_dssp EEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEE-CTT
T ss_pred EEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEE-CCC
Confidence 8999999999999999887 789998886 9999999 985
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.89 E-value=3.2e-22 Score=216.19 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=145.7
Q ss_pred CCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 005473 504 DMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWC 583 (695)
Q Consensus 504 ~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWD 583 (695)
...+++++|+.|+.|++|+...+ .....+.+|.+.|++++|+|++++|++|+.|+.|+|||
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~-------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFN-------------------LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWS 167 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSC-------------------EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCEEEEEECCCCEEEEeCCCc-------------------ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 34478999999999999965322 34556679999999999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEec---CCCCeEEEE-------------
Q 005473 584 TESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTG---HSTTVMSLD------------- 647 (695)
Q Consensus 584 l~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~g---h~~~V~sl~------------- 647 (695)
+++++++..+.+|...|++++|+|++.+|++++.|++|++||+++++ ++..+.. |...|.+++
T Consensus 168 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 246 (420)
T 3vl1_A 168 VKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-TIHTFNRKENPHDGVNSIALFVGTDRQLHEIS 246 (420)
T ss_dssp TTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-EEEEECBTTBTTCCEEEEEEEECCCSSCGGGC
T ss_pred CCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc-eeEEeecCCCCCCCccEEEEecCCcceeeecc
Confidence 99999999999999999999999999999999999999999999865 4677764 344555555
Q ss_pred --------EecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe-cCCCcEEEEEEeCCC
Q 005473 648 --------FHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK-NFFESFVSVRVVQPR 695 (695)
Q Consensus 648 --------fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~-~h~~~VtsVaf~sPd 695 (695)
|+|++. +|++|+.||.|++||+++++.+..+. +|...|++|+| +|+
T Consensus 247 ~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~-~~~ 301 (420)
T 3vl1_A 247 TSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTV-DGN 301 (420)
T ss_dssp CCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEE-CSS
T ss_pred cCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEE-eCC
Confidence 467776 67799999999999999998887776 58899999999 985
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.9e-21 Score=204.31 Aligned_cols=184 Identities=13% Similarity=0.184 Sum_probs=161.1
Q ss_pred ccCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCC
Q 005473 475 QHNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAS 554 (695)
Q Consensus 475 ~~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H 554 (695)
...+...+..+.|++++ .++++|+.|+.|++|+...+ ..+..+.+|
T Consensus 28 l~~h~~~v~~~~~s~~~---------------~~l~~~~~dg~i~vwd~~~~-------------------~~~~~~~~h 73 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEG---------------DLLFSCSKDSSASVWYSLNG-------------------ERLGTLDGH 73 (369)
T ss_dssp EECCSSCEEEEEECTTS---------------CEEEEEESSSCEEEEETTTC-------------------CEEEEECCC
T ss_pred EEEeeceEEEEEEcCCC---------------CEEEEEeCCCEEEEEeCCCc-------------------hhhhhhhhc
Confidence 34466778888888876 68999999999999966433 356678899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENP 629 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~ 629 (695)
...|.+++|+|++++|++++.||.|+|||+.+++++..+. |...|.+++|+|++.+|++++.+ +.|++||++..
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 9999999999999999999999999999999999998887 88999999999999999999999 99999999765
Q ss_pred Ce----------eEEEEecCCC--CeEEEEEecCCCeEEEEEeCCCcEEEEECCC-CeEEEEEecCCCcEEEEEEeCCC
Q 005473 630 DY----------SLRTFTGHST--TVMSLDFHPSKEDLLCSCDNNSEIRYWSINN-GSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 630 ~~----------~l~~~~gh~~--~V~sl~fspdg~~llaSgs~Dg~IriWDl~t-g~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.. .+..+..|.+ .|.+++|+|++. +|++++.||.|++||+++ ++++..+..|...|++++| +|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~-~~~ 229 (369)
T 3zwl_B 153 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQF-SPD 229 (369)
T ss_dssp TTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEE-CTT
T ss_pred ccceeecccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEE-CCC
Confidence 32 3455666776 899999999988 666899999999999998 7999999999999999999 985
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.89 E-value=7.9e-22 Score=229.96 Aligned_cols=167 Identities=23% Similarity=0.384 Sum_probs=145.9
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
.+++++|+.|++|++|+...+ ..+..+.+|...|.+|+|+|++++|++|+.|++|+|||+.
T Consensus 442 g~~l~sgs~Dg~v~vwd~~~~-------------------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 442 GQFALSGSWDGELRLWDLAAG-------------------VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp SSEEEEEETTSEEEEEETTTT-------------------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCEEEEEeCCCcEEEEECCCC-------------------cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 478999999999999976432 3456778999999999999999999999999999999987
Q ss_pred CCeEEEEe---cccCCCeEEEEEcCCC--CEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEe
Q 005473 586 SFTVKSTL---EEHTQWITDVRFSPSL--SRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCD 660 (695)
Q Consensus 586 t~~~~~~l---~~H~~~V~~v~~spdg--~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs 660 (695)
........ .+|...|.|++|+|++ ..|++|+.|++|+|||+++.. ++..+.+|.+.|++++|+|++. +|++|+
T Consensus 503 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg~-~l~sg~ 580 (694)
T 3dm0_A 503 GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGS-LCASGG 580 (694)
T ss_dssp SCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred CCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCCC-EEEEEe
Confidence 65443332 4789999999999986 589999999999999999866 4788999999999999999987 677999
Q ss_pred CCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 661 NNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 661 ~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.||.|+|||+++++++..+..+ ..|.+++| +|+
T Consensus 581 ~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~-sp~ 613 (694)
T 3dm0_A 581 KDGVVLLWDLAEGKKLYSLEAN-SVIHALCF-SPN 613 (694)
T ss_dssp TTSBCEEEETTTTEEEECCBCS-SCEEEEEE-CSS
T ss_pred CCCeEEEEECCCCceEEEecCC-CcEEEEEE-cCC
Confidence 9999999999999999888654 68999999 985
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=1.5e-21 Score=206.44 Aligned_cols=184 Identities=18% Similarity=0.230 Sum_probs=158.1
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+..++..+.|++++ +++++|+.|+.|++|+.... .+..+..+.+|...
T Consensus 7 ~~~~i~~~~~s~~~---------------~~l~~~~~d~~v~i~~~~~~-----------------~~~~~~~~~~h~~~ 54 (372)
T 1k8k_C 7 LVEPISCHAWNKDR---------------TQIAICPNNHEVHIYEKSGN-----------------KWVQVHELKEHNGQ 54 (372)
T ss_dssp CSSCCCEEEECTTS---------------SEEEEECSSSEEEEEEEETT-----------------EEEEEEEEECCSSC
T ss_pred cCCCeEEEEECCCC---------------CEEEEEeCCCEEEEEeCCCC-----------------cEEeeeeecCCCCc
Confidence 55677888888876 78899999999999965322 23467788899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE--ecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCe---e
Q 005473 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDY---S 632 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~--l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~---~ 632 (695)
|.+++|+|++++|++++.|+.|+|||+++++.... +..|...|.+++|+|++.+|++++.|+.|++||++.... .
T Consensus 55 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 134 (372)
T 1k8k_C 55 VTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC 134 (372)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE
T ss_pred ccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee
Confidence 99999999999999999999999999988875544 477999999999999999999999999999999987662 2
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEEC------------------CCCeEEEEEecCCCcEEEEEEeCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSI------------------NNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl------------------~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
.....+|...|++++|+|++. +|++|+.||.|++||+ ..++++..+.+|...|++++| +|
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~ 212 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF-SA 212 (372)
T ss_dssp EEECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE-CS
T ss_pred eeeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE-CC
Confidence 334467899999999999987 6779999999999995 468899999999999999999 88
Q ss_pred C
Q 005473 695 R 695 (695)
Q Consensus 695 d 695 (695)
+
T Consensus 213 ~ 213 (372)
T 1k8k_C 213 N 213 (372)
T ss_dssp S
T ss_pred C
Confidence 5
No 49
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.89 E-value=1.4e-21 Score=209.47 Aligned_cols=181 Identities=14% Similarity=0.145 Sum_probs=153.7
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|++++. .++++|+.|+.|++|+..... ......+.+|...
T Consensus 72 h~~~v~~~~~~~~~~--------------~~l~s~~~dg~i~iwd~~~~~-----------------~~~~~~~~~h~~~ 120 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHP--------------TTVAVGSKGGDIILWDYDVQN-----------------KTSFIQGMGPGDA 120 (383)
T ss_dssp CSSCEEEEEECSSCT--------------TEEEEEEBTSCEEEEETTSTT-----------------CEEEECCCSTTCB
T ss_pred CCCCEEEEEECCCCC--------------CEEEEEcCCCeEEEEeCCCcc-----------------cceeeecCCcCCc
Confidence 445788888988764 689999999999999765331 1222233579999
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEeccc---CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeE
Q 005473 558 VESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEEH---TQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 558 V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H---~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
|.+++|+| ++++|++|+.|+.|+|||+++ ..+..+..| ...|.+++|+|++.+|++|+.|+.|++||++ +. ++
T Consensus 121 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~-~~ 197 (383)
T 3ei3_B 121 ITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH-EI 197 (383)
T ss_dssp EEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC-EE
T ss_pred eeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC-EE
Confidence 99999999 789999999999999999986 555555444 4889999999999999999999999999995 33 58
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC----CeEEEEEecCCCcEEEEEEeCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN----GSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t----g~~v~~~~~h~~~VtsVaf~sP 694 (695)
..+.+|...|.+++|+|+++.+|++|+.|+.|++||+++ +.++..+ +|...|++|+| +|
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~-s~ 260 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYF-NP 260 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEE-CT
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEE-cC
Confidence 889999999999999999987888999999999999998 6777777 79999999999 98
No 50
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=3.2e-22 Score=216.68 Aligned_cols=171 Identities=18% Similarity=0.272 Sum_probs=147.8
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~ 585 (695)
.++++++.|+.|++|+..... .....+..+.+|.+.|++++|+| ++++|++|+.||+|+|||+.
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~---------------~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTG---------------RVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCE---------------ECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred EEEEEEcCCCEEEEEECccCC---------------CCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 455678899999999764321 00123345678999999999999 99999999999999999999
Q ss_pred CC-------eEEEEecccCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCeeEEEE--ecCCCCeEEEEEecCCCeE
Q 005473 586 SF-------TVKSTLEEHTQWITDVRFSPSL-SRLATSSADRTVRVWDTENPDYSLRTF--TGHSTTVMSLDFHPSKEDL 655 (695)
Q Consensus 586 t~-------~~~~~l~~H~~~V~~v~~spdg-~~LaTgs~DgtIrvWDl~t~~~~l~~~--~gh~~~V~sl~fspdg~~l 655 (695)
++ +++..+.+|...|.+++|+|++ .+|++++.|++|++||+++++ ++..+ .+|...|.+++|+|++. +
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~ 190 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-AVLTLGPDVHPDTIYSVDWSRDGA-L 190 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-EEEEECTTTCCSCEEEEEECTTSS-C
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-ccEEEecCCCCCceEEEEECCCCC-E
Confidence 87 6788899999999999999997 699999999999999999865 47788 78999999999999988 5
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEE-ecCCCc-EEEEEEeCCC
Q 005473 656 LCSCDNNSEIRYWSINNGSCAGVF-KNFFES-FVSVRVVQPR 695 (695)
Q Consensus 656 laSgs~Dg~IriWDl~tg~~v~~~-~~h~~~-VtsVaf~sPd 695 (695)
|++|+.||.|++||+++++++..+ .+|.+. +.+++| +|+
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 231 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF-VSE 231 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE-CST
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE-cCC
Confidence 668999999999999999999999 688876 899999 885
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.89 E-value=5.9e-22 Score=214.13 Aligned_cols=168 Identities=11% Similarity=0.133 Sum_probs=142.6
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
.++++|+.|+.|++|+...+ ..+..+.+|...|.+++|+|++++|++|+.|++|+|||+++
T Consensus 152 ~~l~s~s~d~~i~iwd~~~~-------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 152 EALISSSQDMQLKIWSVKDG-------------------SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp SEEEEEETTSEEEEEETTTC-------------------CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred CEEEEEeCCCeEEEEeCCCC-------------------cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 78999999999999976533 23456778999999999999999999999999999999999
Q ss_pred CeEEEEecc---cCCCeEEE---------------------EEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCC
Q 005473 587 FTVKSTLEE---HTQWITDV---------------------RFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTT 642 (695)
Q Consensus 587 ~~~~~~l~~---H~~~V~~v---------------------~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~ 642 (695)
++++..+.. |...|.++ +|+|++.+|++|+.||.|++||++++........+|...
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 999988875 34445554 457889999999999999999999987655555678899
Q ss_pred eEEEEEecCCCeEEEEEeCCCcEEEEECCCCe-EEEEEec-CCCcEEEEEEeCC
Q 005473 643 VMSLDFHPSKEDLLCSCDNNSEIRYWSINNGS-CAGVFKN-FFESFVSVRVVQP 694 (695)
Q Consensus 643 V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~-~v~~~~~-h~~~VtsVaf~sP 694 (695)
|++++|+|++..+|++|+.||.|++||+++++ ++..+.+ |...|+++.| ++
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~ 345 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AA 345 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ET
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CC
Confidence 99999999998678899999999999999875 4777776 7788888877 43
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.4e-22 Score=228.41 Aligned_cols=195 Identities=10% Similarity=0.024 Sum_probs=153.9
Q ss_pred CCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeE
Q 005473 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (695)
Q Consensus 480 ~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~ 559 (695)
..+..+.|+|++. ..+...+|++++.|++|++|+...+....... . ....+...+.+|...|+
T Consensus 208 ~~V~~v~wsp~~~---------~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~---~-----~~~~p~~~l~~h~~~v~ 270 (524)
T 2j04_B 208 GEVWDLKWHEGCH---------APHLVGCLSFVSQEGTINFLEIIDNATDVHVF---K-----MCEKPSLTLSLADSLIT 270 (524)
T ss_dssp CSEEEEEECSSCC---------CSSSSCEEEEEETTSCEEEEECCCCSSSSSEE---E-----CCCSCSEEECCTTTCEE
T ss_pred CcEEEEEECCCCC---------CCCCCceEEEEecCCeEEEEEcCCCccccccc---e-----eecCceEEEEcCCCCEE
Confidence 4566777777531 01123789999999999999875442110000 0 00123456789999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCC-eEEEEecccCCCeEEE--EEcCCC-CEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 560 SCHFSPDGKLLATGGHDKKAVLWCTESF-TVKSTLEEHTQWITDV--RFSPSL-SRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 560 ~v~fspdg~~LaSgs~Dg~V~IWDl~t~-~~~~~l~~H~~~V~~v--~~spdg-~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
||+|++++ .|++|+.||+|+|||++++ .+...+.+|...|++| .|+|++ .+|+||+.|++|+|||+++++. +.+
T Consensus 271 sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~-~~~ 348 (524)
T 2j04_B 271 TFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT-TKT 348 (524)
T ss_dssp EEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH-HCE
T ss_pred EEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc-ccc
Confidence 99999864 8999999999999999876 4556788999999999 567887 8999999999999999997653 556
Q ss_pred EecCCC--CeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTGHST--TVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~--~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.+|.. .|.+|+|+|++. .+++++.|++|++||++++.++.++.+|.+.|++|+| +|+
T Consensus 349 ~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~-Sp~ 408 (524)
T 2j04_B 349 TVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV-SRL 408 (524)
T ss_dssp EEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC-CSS
T ss_pred cccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEe-CCC
Confidence 667653 589999999988 4668889999999999999999999999999999999 985
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=2e-21 Score=205.52 Aligned_cols=170 Identities=12% Similarity=0.094 Sum_probs=146.6
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
+++++++.|+.|++|+.... .......+..|...|.+++|+|++++|++|+.|+.|+|||++.
T Consensus 65 ~~l~~~~~dg~i~vwd~~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 65 NRIVTCGTDRNAYVWTLKGR-----------------TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp TEEEEEETTSCEEEEEEETT-----------------EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCC-----------------eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecC
Confidence 78999999999999965322 1233444577999999999999999999999999999999987
Q ss_pred Ce----EEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-----------------CCeeEEEEecCCCCeEE
Q 005473 587 FT----VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN-----------------PDYSLRTFTGHSTTVMS 645 (695)
Q Consensus 587 ~~----~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t-----------------~~~~l~~~~gh~~~V~s 645 (695)
.. ......+|...|.+++|+|++.+|++++.|+.|++||++. ...++..+.+|...|.+
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 207 (372)
T 1k8k_C 128 ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG 207 (372)
T ss_dssp TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE
T ss_pred CCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEE
Confidence 76 2333477899999999999999999999999999999641 23457888899999999
Q ss_pred EEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 646 LDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 646 l~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++|+|++. +|++++.|+.|++||+++++++..+..|..+|++++| +|+
T Consensus 208 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~ 255 (372)
T 1k8k_C 208 VCFSANGS-RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTF-ITE 255 (372)
T ss_dssp EEECSSSS-EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEE-EET
T ss_pred EEECCCCC-EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEE-ecC
Confidence 99999987 6779999999999999999999999999999999999 875
No 54
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=1.8e-21 Score=210.80 Aligned_cols=174 Identities=18% Similarity=0.214 Sum_probs=148.0
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDG-KLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg-~~LaSgs~Dg~V~IWDl~ 585 (695)
.++++|+.|++|++|+...+.... ....++..+.+|...|.+++|+|++ ++|++|+.|+.|+|||++
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~------------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVL------------PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSS------------CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCeEEEEEccCCCCcc------------ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 789999999999999876542110 1113456778999999999999998 699999999999999999
Q ss_pred CCeEEEEe--cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE-ecCCCC-eEEEEEecCCCeEEEEE--
Q 005473 586 SFTVKSTL--EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF-TGHSTT-VMSLDFHPSKEDLLCSC-- 659 (695)
Q Consensus 586 t~~~~~~l--~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~-~gh~~~-V~sl~fspdg~~llaSg-- 659 (695)
+++++..+ .+|...|++++|+|++.+|++++.|+.|++||++++.. +..+ .+|.+. +.++.|+|++. +|++|
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~ 240 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSEGK-ILTTGFS 240 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECSTTE-EEEEEEC
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCCCc-EEEEecc
Confidence 99999999 88999999999999999999999999999999998664 6777 788876 89999999976 67787
Q ss_pred -eCCCcEEEEECCCCeE-EEEEe-cCCCcEEEEEEeCCC
Q 005473 660 -DNNSEIRYWSINNGSC-AGVFK-NFFESFVSVRVVQPR 695 (695)
Q Consensus 660 -s~Dg~IriWDl~tg~~-v~~~~-~h~~~VtsVaf~sPd 695 (695)
+.|+.|++||+++++. +..+. .|...|.+++| +|+
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-s~~ 278 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF-DPD 278 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE-ETT
T ss_pred CCCCceEEEEcCccccCCceEEeccCCCceeEEEE-cCC
Confidence 7899999999998764 44444 57788999999 885
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.88 E-value=6.4e-21 Score=198.02 Aligned_cols=183 Identities=20% Similarity=0.329 Sum_probs=155.2
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEE--ecCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQL--IPAS 554 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~--l~~H 554 (695)
.+...+..+.|++++ +++++++ |+.|++|+...... ...+.. ..+|
T Consensus 49 ~h~~~v~~~~~~~~~---------------~~l~~~~-dg~i~iw~~~~~~~----------------~~~~~~~~~~~~ 96 (337)
T 1gxr_A 49 NHGEVVCAVTISNPT---------------RHVYTGG-KGCVKVWDISHPGN----------------KSPVSQLDCLNR 96 (337)
T ss_dssp CCSSCCCEEEECSSS---------------SEEEEEC-BSEEEEEETTSTTC----------------CSCSEEEECSCT
T ss_pred cCCCceEEEEEecCC---------------cEEEEcC-CCeEEEEECCCCCc----------------eeeeecccccCC
Confidence 455677777777766 6788888 99999997754321 011222 2378
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--EEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS 632 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~--~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~ 632 (695)
...|.+++|+|++++|++++.|+.|++||+++++ ....+.+|...|.+++|+|++.+|++++.|+.|++||+++++ +
T Consensus 97 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~-~ 175 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-L 175 (337)
T ss_dssp TSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-E
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-e
Confidence 8999999999999999999999999999999877 667788899999999999999999999999999999999865 4
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+..+.+|...|.+++|+|++. +|++++.||.|++||+++++++..+. |...|.+++| +|+
T Consensus 176 ~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~-s~~ 235 (337)
T 1gxr_A 176 VRQFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGY-CPT 235 (337)
T ss_dssp EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEE-CTT
T ss_pred eeeeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEE-CCC
Confidence 888899999999999999987 66689999999999999999988875 7788999999 885
No 56
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.88 E-value=2.6e-22 Score=211.42 Aligned_cols=172 Identities=20% Similarity=0.352 Sum_probs=143.0
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEE
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWC 583 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd--g~~LaSgs~Dg~V~IWD 583 (695)
..++++|+.|++|++|+...+ .+..+..+.+|...|.+|+|+|+ +.+|++|+.|++|+|||
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~-----------------~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd 133 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENG-----------------TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLT 133 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSS-----------------CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCC-----------------cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEe
Confidence 478999999999999965422 11345567899999999999998 78999999999999999
Q ss_pred CCCCe---EEEEecccCCCeEEEEEcCC-----------------CCEEEEEeCCCeEEEEECCCCC--eeEEEEecCCC
Q 005473 584 TESFT---VKSTLEEHTQWITDVRFSPS-----------------LSRLATSSADRTVRVWDTENPD--YSLRTFTGHST 641 (695)
Q Consensus 584 l~t~~---~~~~l~~H~~~V~~v~~spd-----------------g~~LaTgs~DgtIrvWDl~t~~--~~l~~~~gh~~ 641 (695)
+++.. ....+.+|...|.+++|+|+ +.+|++|+.|++|++||++... .++..+.+|..
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~ 213 (316)
T 3bg1_A 134 YTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD 213 (316)
T ss_dssp ECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS
T ss_pred cCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC
Confidence 98753 23456789999999999997 4689999999999999997543 35678899999
Q ss_pred CeEEEEEecCC---CeEEEEEeCCCcEEEEECCCC---e-EEEEEecCCCcEEEEEEeCCC
Q 005473 642 TVMSLDFHPSK---EDLLCSCDNNSEIRYWSINNG---S-CAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 642 ~V~sl~fspdg---~~llaSgs~Dg~IriWDl~tg---~-~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|.+++|+|++ ..+|++|+.|++|+|||+++. . ....+..|.+.|.+|+| +|+
T Consensus 214 ~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~-sp~ 273 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSW-SIT 273 (316)
T ss_dssp CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEE-CTT
T ss_pred ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEE-cCC
Confidence 99999999986 247889999999999999762 1 23456678999999999 986
No 57
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=1.1e-21 Score=215.46 Aligned_cols=194 Identities=16% Similarity=0.253 Sum_probs=160.5
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|++++. .++++++.|+.|++|+......... .......+..+.+|...
T Consensus 127 h~~~v~~l~~~p~~~--------------~~lat~~~dg~V~vwd~~~~~~~~~---------~~~~~~~~~~~~~h~~~ 183 (430)
T 2xyi_A 127 HEGEVNRARYMPQNA--------------CVIATKTPSSDVLVFDYTKHPSKPE---------PSGECQPDLRLRGHQKE 183 (430)
T ss_dssp ESSCCSEEEEETTEE--------------EEEEEECSSSCEEEEEGGGSCSSCC---------TTCCCCCSEEEECCSSC
T ss_pred CCCcEEEEEECCCCC--------------cEEEEECCCCcEEEEECCCcccccC---------ccccCCCcEEecCCCCC
Confidence 344566666666432 7899999999999997754211100 01123456777899999
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeE-------EEEecccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Q 005473 558 VESCHFSPDGK-LLATGGHDKKAVLWCTESFTV-------KSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDTEN 628 (695)
Q Consensus 558 V~~v~fspdg~-~LaSgs~Dg~V~IWDl~t~~~-------~~~l~~H~~~V~~v~~sp-dg~~LaTgs~DgtIrvWDl~t 628 (695)
|++|+|+|++. +|++|+.||.|+|||+.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||+++
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999998 999999999999999987322 456778999999999999 678999999999999999998
Q ss_pred CC--eeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC-CeEEEEEecCCCcEEEEEEeCCC
Q 005473 629 PD--YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN-GSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 629 ~~--~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t-g~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.. .++..+..|...|++++|+|++..+|++|+.||.|++||+++ +.++..+.+|...|++|+| +|+
T Consensus 264 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~-sp~ 332 (430)
T 2xyi_A 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW-SPH 332 (430)
T ss_dssp SCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE-CSS
T ss_pred CCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE-CCC
Confidence 63 457788899999999999999998899999999999999998 6789999999999999999 985
No 58
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=2e-21 Score=209.55 Aligned_cols=178 Identities=17% Similarity=0.181 Sum_probs=144.4
Q ss_pred CceEEEEecCCCccccccCCccCCCCc-EEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeE
Q 005473 481 SKSLLMFGSDGMGSLTSAPNQLTDMDR-FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (695)
Q Consensus 481 ~~s~l~~~~dg~~~la~s~~~l~~~~~-~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~ 559 (695)
...++.|+||+. . .+++++.|++|++|+.... .++..+ .|.+.|.
T Consensus 135 ~~~~v~fSpDg~--------------~la~as~~~d~~i~iwd~~~~-------------------~~~~~~-~~~~~V~ 180 (365)
T 4h5i_A 135 YTKLVYISREGT--------------VAAIASSKVPAIMRIIDPSDL-------------------TEKFEI-ETRGEVK 180 (365)
T ss_dssp CEEEEEECTTSS--------------CEEEEESCSSCEEEEEETTTT-------------------EEEEEE-ECSSCCC
T ss_pred CEEEEEEcCCCC--------------EEEEEECCCCCEEEEeECCCC-------------------cEEEEe-CCCCceE
Confidence 356778888874 2 2456778999999976432 233444 3677899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE--EecccCCCeEEEEEcCCCCEEEEEeCCC----eEEEEECCCCCe--
Q 005473 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKS--TLEEHTQWITDVRFSPSLSRLATSSADR----TVRVWDTENPDY-- 631 (695)
Q Consensus 560 ~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~--~l~~H~~~V~~v~~spdg~~LaTgs~Dg----tIrvWDl~t~~~-- 631 (695)
+|+|+|||++|++++.|+ +++|+..++..+. ...+|...|.+++|+|++.++++++.|+ ++++||+.....
T Consensus 181 ~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~ 259 (365)
T 4h5i_A 181 DLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV 259 (365)
T ss_dssp EEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE
T ss_pred EEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc
Confidence 999999999999998555 6667666666553 3467899999999999999999998887 689999876543
Q ss_pred -eEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEE-ecCCCcEEEEEEeCCC
Q 005473 632 -SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF-KNFFESFVSVRVVQPR 695 (695)
Q Consensus 632 -~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~-~~h~~~VtsVaf~sPd 695 (695)
....+.+|...|++++|+|+|. +||+|+.|++|+|||+++++++..+ .+|..+|++|+| +||
T Consensus 260 ~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f-Spd 323 (365)
T 4h5i_A 260 LRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI-SPD 323 (365)
T ss_dssp EEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE-CTT
T ss_pred eeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEE-CCC
Confidence 2356788999999999999998 7789999999999999999999986 699999999999 996
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=5.7e-21 Score=207.25 Aligned_cols=166 Identities=17% Similarity=0.294 Sum_probs=148.4
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
..++++|+.|+.|++|+...+ ..+..+.+|...|.+++| ++++|++|+.||.|++||++
T Consensus 146 ~~~l~~~~~dg~i~iwd~~~~-------------------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 146 GSFLSVGLGNGLVDIYDVESQ-------------------TKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp SSEEEEEETTSCEEEEETTTC-------------------CEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECcCC-------------------eEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecc
Confidence 378999999999999976432 355677899999999999 56799999999999999998
Q ss_pred -CCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEe--CC
Q 005473 586 -SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCD--NN 662 (695)
Q Consensus 586 -t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs--~D 662 (695)
....+..+.+|.+.|.+++|+|++.+|++|+.|+.|++||++++. ++..+.+|...|.+++|+|++..++++|+ .|
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d 283 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMD 283 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS-EEEEECCCSSCCCEEEECTTSTTEEEEECCTTT
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-ccEEecCCcceEEEEEECCCCCCEEEEecCCCC
Confidence 567788899999999999999999999999999999999999865 47888899999999999999988998876 79
Q ss_pred CcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 663 SEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 663 g~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.|++||+++++++..+. |...|++++| +|+
T Consensus 284 ~~i~i~d~~~~~~~~~~~-~~~~v~~~~~-s~~ 314 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVD-AGSQVTSLIW-SPH 314 (401)
T ss_dssp CEEEEEETTTCCEEEEEE-CSSCEEEEEE-CSS
T ss_pred CEEEEEECCCCCEEEEEe-CCCcEEEEEE-CCC
Confidence 999999999999999986 5578999999 985
No 60
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.88 E-value=1.5e-21 Score=205.33 Aligned_cols=184 Identities=10% Similarity=0.171 Sum_probs=152.5
Q ss_pred CCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeE
Q 005473 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (695)
Q Consensus 480 ~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~ 559 (695)
..+..+.|++++. ....++++|+.|+.|++|+.... ..+..+.+|...|.
T Consensus 70 ~~v~~~~~~~~~~-----------~~~~~l~~~~~dg~i~v~d~~~~-------------------~~~~~~~~~~~~i~ 119 (366)
T 3k26_A 70 ENFYTCAWTYDSN-----------TSHPLLAVAGSRGIIRIINPITM-------------------QCIKHYVGHGNAIN 119 (366)
T ss_dssp CCEEEEEEEECTT-----------TCCEEEEEEETTCEEEEECTTTC-------------------CEEEEEESCCSCEE
T ss_pred CcEEEEEeccCCC-----------CCCCEEEEecCCCEEEEEEchhc-------------------eEeeeecCCCCcEE
Confidence 4456666666542 11368999999999999965332 34566789999999
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEe---cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC-----
Q 005473 560 SCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTL---EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD----- 630 (695)
Q Consensus 560 ~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~~~~~~l---~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~----- 630 (695)
+++|+| ++++|++|+.||.|+|||+++++.+..+ .+|...|.+++|+|++.+|++++.|+.|++||++++.
T Consensus 120 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 120 ELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence 999999 9999999999999999999999999888 7899999999999999999999999999999987431
Q ss_pred ----------------------------------------------------------------------------eeEE
Q 005473 631 ----------------------------------------------------------------------------YSLR 634 (695)
Q Consensus 631 ----------------------------------------------------------------------------~~l~ 634 (695)
.++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 279 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILG 279 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEE
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheec
Confidence 1134
Q ss_pred EEecCCCCeEEEEEecC--CCeEEEEEeCCCcEEEEECCCCe----EEEEEecC--CCcEEEEEEeCCC
Q 005473 635 TFTGHSTTVMSLDFHPS--KEDLLCSCDNNSEIRYWSINNGS----CAGVFKNF--FESFVSVRVVQPR 695 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspd--g~~llaSgs~Dg~IriWDl~tg~----~v~~~~~h--~~~VtsVaf~sPd 695 (695)
.+.+|...|++++|+|+ +. +|++|+.||.|++||+.+++ .+..+.+| ...|++|+| +|+
T Consensus 280 ~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~ 346 (366)
T 3k26_A 280 RFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSF-SRD 346 (366)
T ss_dssp EEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEE-CTT
T ss_pred cccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEe-CCC
Confidence 45567778889999999 77 77799999999999999875 44577777 799999999 985
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.88 E-value=4.5e-21 Score=205.28 Aligned_cols=177 Identities=20% Similarity=0.274 Sum_probs=149.6
Q ss_pred cE-EEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEe-------cCCCCCeEEEEEcCCCCEEEEEeCCCc
Q 005473 507 RF-VDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI-------PASTSKVESCHFSPDGKLLATGGHDKK 578 (695)
Q Consensus 507 ~~-lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l-------~~H~~~V~~v~fspdg~~LaSgs~Dg~ 578 (695)
.+ +++++.|+.|++|+........ ......+.+...+ ..|...|.+++|+|++ +|++|+.|+.
T Consensus 138 ~~~l~~~~~dg~i~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~ 208 (397)
T 1sq9_A 138 SHRLVATDVKGTTYIWKFHPFADES--------NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT 208 (397)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHH--------HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE
T ss_pred ceEEEEEeCCCcEEEEeCCcccccc--------ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc
Confidence 67 8999999999999775410000 0000111222233 4588999999999999 9999999999
Q ss_pred EEEEECCCCeEEEEecc---c---CCCeEEEEEcCCCCEEEEEeCC---CeEEEEECCCCCeeEEEEec-----------
Q 005473 579 AVLWCTESFTVKSTLEE---H---TQWITDVRFSPSLSRLATSSAD---RTVRVWDTENPDYSLRTFTG----------- 638 (695)
Q Consensus 579 V~IWDl~t~~~~~~l~~---H---~~~V~~v~~spdg~~LaTgs~D---gtIrvWDl~t~~~~l~~~~g----------- 638 (695)
|+|||+++++++..+.. | ...|.+++|+|++.+|++++.| +.|++||+++++ ++..+.+
T Consensus 209 i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 209 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGE 287 (397)
T ss_dssp EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-EEEEECBC--------CC
T ss_pred EEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc-ccceeccCcccccccccc
Confidence 99999999999999998 9 9999999999999999999999 999999999876 4788888
Q ss_pred --CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe------cC---------------CCcEEEEEEeCCC
Q 005473 639 --HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK------NF---------------FESFVSVRVVQPR 695 (695)
Q Consensus 639 --h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~------~h---------------~~~VtsVaf~sPd 695 (695)
|...|.+++|+|++. +|++|+.||.|+|||+++++++..+. +| ...|++|+| +|+
T Consensus 288 ~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~-~~~ 365 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGE-TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKF-LKK 365 (397)
T ss_dssp BSBSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEE-ECT
T ss_pred cccCCcEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEe-ccc
Confidence 999999999999988 67799999999999999999999999 88 999999999 885
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.1e-21 Score=211.15 Aligned_cols=177 Identities=18% Similarity=0.300 Sum_probs=150.8
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD-GKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd-g~~LaSgs~Dg~V~IWDl~ 585 (695)
.++++++.|+.|++|+......... ......+..+.+|...|.+++|+|+ +.+|++++.|+.|+|||++
T Consensus 127 ~~l~s~~~dg~v~iwd~~~~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 196 (416)
T 2pm9_A 127 NVLASGGNNGEIFIWDMNKCTESPS----------NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK 196 (416)
T ss_dssp TBEEEECSSSCEEBCBTTTTSSCTT----------TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCCccccc----------cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence 7899999999999998755421000 0001111234678999999999999 7899999999999999999
Q ss_pred CCeEEEEeccc------CCCeEEEEEcCCC-CEEEEEeCCC---eEEEEECCCCCeeEEEEe-cCCCCeEEEEEec-CCC
Q 005473 586 SFTVKSTLEEH------TQWITDVRFSPSL-SRLATSSADR---TVRVWDTENPDYSLRTFT-GHSTTVMSLDFHP-SKE 653 (695)
Q Consensus 586 t~~~~~~l~~H------~~~V~~v~~spdg-~~LaTgs~Dg---tIrvWDl~t~~~~l~~~~-gh~~~V~sl~fsp-dg~ 653 (695)
+++++..+..| ...|.+++|+|++ .+|++++.|+ .|++||++++..++..+. +|...|++++|+| ++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 197 AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH 276 (416)
T ss_dssp TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS
T ss_pred CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC
Confidence 99999988876 7899999999986 6899999998 999999998766678888 9999999999999 655
Q ss_pred eEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 654 DLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 654 ~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+|++|+.|+.|++||+++++++..+.+|...|++++| +|+
T Consensus 277 -~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~-s~~ 316 (416)
T 2pm9_A 277 -LLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKF-APE 316 (416)
T ss_dssp -CEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEE-CTT
T ss_pred -eEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEE-CCC
Confidence 7779999999999999999999999999999999999 985
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.4e-21 Score=206.43 Aligned_cols=145 Identities=10% Similarity=0.157 Sum_probs=134.2
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 005473 547 EFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (695)
Q Consensus 547 ~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl 626 (695)
.+..+.+|...|.+++|+|++++|++++.|+.|+|||+++++++..+.+|...|.+++|+|++ +|++++.|+.|++||+
T Consensus 239 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 239 PTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSL 317 (425)
T ss_dssp CSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEET
T ss_pred eeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEEC
Confidence 445677899999999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred CCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCe--------------------EEEEEecCCC--
Q 005473 627 ENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGS--------------------CAGVFKNFFE-- 684 (695)
Q Consensus 627 ~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~--------------------~v~~~~~h~~-- 684 (695)
+++. ++..+..|...|.+++|+|++. +|++|+.||.|++||+++++ ++..+.+|..
T Consensus 318 ~~~~-~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (425)
T 1r5m_A 318 KQNT-LLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDND 395 (425)
T ss_dssp TTTE-EEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCC
T ss_pred CCCc-EeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCC
Confidence 9865 5888889999999999999987 67789999999999999888 8999999976
Q ss_pred cEEEEEEeCCC
Q 005473 685 SFVSVRVVQPR 695 (695)
Q Consensus 685 ~VtsVaf~sPd 695 (695)
.|++++| +|+
T Consensus 396 ~v~~~~~-s~~ 405 (425)
T 1r5m_A 396 YIFDLSW-NCA 405 (425)
T ss_dssp CEEEEEE-CTT
T ss_pred ceEEEEc-cCC
Confidence 9999999 985
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.9e-21 Score=200.30 Aligned_cols=172 Identities=17% Similarity=0.292 Sum_probs=145.4
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEE
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWC 583 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd--g~~LaSgs~Dg~V~IWD 583 (695)
..++++|+.|+.|++|+...+ ....+..+.+|...|.+++|+|+ +++|++++.|+.|+|||
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENG-----------------RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETT-----------------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCEEEEeccCCEEEEEEcCCC-----------------ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence 378999999999999965332 23466777889999999999999 99999999999999999
Q ss_pred CCCCe--EEEEecccCCCeEEEEEcC-------------CCCEEEEEeCCCeEEEEECCCCC---eeEEEEecCCCCeEE
Q 005473 584 TESFT--VKSTLEEHTQWITDVRFSP-------------SLSRLATSSADRTVRVWDTENPD---YSLRTFTGHSTTVMS 645 (695)
Q Consensus 584 l~t~~--~~~~l~~H~~~V~~v~~sp-------------dg~~LaTgs~DgtIrvWDl~t~~---~~l~~~~gh~~~V~s 645 (695)
+++.. ....+.+|...|.+++|+| ++.+|++++.|+.|++||++++. .++..+.+|...|.+
T Consensus 132 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~ 211 (379)
T 3jrp_A 132 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 211 (379)
T ss_dssp CCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred cCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeE
Confidence 98873 4456788999999999999 68999999999999999998764 245678899999999
Q ss_pred EEEecCC--CeEEEEEeCCCcEEEEECCCCe---EEEE--EecCCCcEEEEEEeCCC
Q 005473 646 LDFHPSK--EDLLCSCDNNSEIRYWSINNGS---CAGV--FKNFFESFVSVRVVQPR 695 (695)
Q Consensus 646 l~fspdg--~~llaSgs~Dg~IriWDl~tg~---~v~~--~~~h~~~VtsVaf~sPd 695 (695)
++|+|++ ..+|++|+.||.|+|||++++. .... ...|...|++++| +|+
T Consensus 212 ~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~ 267 (379)
T 3jrp_A 212 VAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASW-SLS 267 (379)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEE-CSS
T ss_pred EEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEE-cCC
Confidence 9999994 4578899999999999999864 2222 2358899999999 986
No 65
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.88 E-value=9.5e-21 Score=213.62 Aligned_cols=166 Identities=27% Similarity=0.475 Sum_probs=148.4
Q ss_pred CCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 005473 504 DMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWC 583 (695)
Q Consensus 504 ~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWD 583 (695)
+...++++|+.|+.|++|+... ..+..+.+|...|.+++|+|++++|++++.|+.|+|||
T Consensus 354 ~~g~~l~~~~~dg~v~~~~~~~--------------------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 354 PDGQTIASASDDKTVKLWNRNG--------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 413 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETTC--------------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEeCCCEEEEEcCCC--------------------CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 3447899999999999995311 34566789999999999999999999999999999999
Q ss_pred CCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 584 TESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 584 l~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
. +++.+..+.+|...|++++|+|++.+|++++.|++|++||+.. + ++..+.+|...|++++|+|+++ +|++++.|+
T Consensus 414 ~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~-~~~~~~~~~~~v~~~~~spd~~-~las~~~d~ 489 (577)
T 2ymu_A 414 R-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDK 489 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-C-EEEEEECCSSCEEEEEECTTSC-EEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-C-EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCC
Confidence 6 5678889999999999999999999999999999999999753 3 5788999999999999999988 677999999
Q ss_pred cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 664 EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|++||. +++++..+.+|...|++|+| +|+
T Consensus 490 ~i~iw~~-~~~~~~~~~~h~~~v~~l~~-s~d 519 (577)
T 2ymu_A 490 TVKLWNR-NGQLLQTLTGHSSSVRGVAF-SPD 519 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSSCEEEEEE-CTT
T ss_pred EEEEEcC-CCCEEEEEeCCCCCEEEEEE-cCC
Confidence 9999995 68999999999999999999 986
No 66
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=1.1e-21 Score=213.55 Aligned_cols=175 Identities=11% Similarity=0.096 Sum_probs=137.2
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcC--------CCCEEEEEeCCC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP--------DGKLLATGGHDK 577 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fsp--------dg~~LaSgs~Dg 577 (695)
..++++++.|++|++|+...+. ......+..+.+|.+.|++|+|+| |+++||+|+.|+
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~--------------~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNET--------------IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTE--------------EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred CCEEEEEeCCCcEEEEECCCCc--------------cceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4689999999999999764331 112234456789999999999998 889999999999
Q ss_pred cEEEEECCCCeEEEEecccCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCeeE-----------------------
Q 005473 578 KAVLWCTESFTVKSTLEEHTQWITDVRFSPSL-SRLATSSADRTVRVWDTENPDYSL----------------------- 633 (695)
Q Consensus 578 ~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg-~~LaTgs~DgtIrvWDl~t~~~~l----------------------- 633 (695)
+|+|||++++.++..+.+|...|.+++|+|++ .+|++|+.|++|++||++++....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 99999999988888888999999999999986 479999999999999998654211
Q ss_pred -EEEecCCCCeEEEEEe-cC------------------------------------------------------------
Q 005473 634 -RTFTGHSTTVMSLDFH-PS------------------------------------------------------------ 651 (695)
Q Consensus 634 -~~~~gh~~~V~sl~fs-pd------------------------------------------------------------ 651 (695)
....+|...|.++.|+ |+
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 0112344444444443 22
Q ss_pred -CCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 652 -KEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 652 -g~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+..++++|+.||.|++||+.+++++..+.+|..+|++|+| |||
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svaf-spd 370 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCW-HQD 370 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEE-CTT
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEE-cCC
Confidence 2335667888999999999999888888899999999999 996
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.6e-20 Score=201.21 Aligned_cols=177 Identities=20% Similarity=0.334 Sum_probs=154.4
Q ss_pred CCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeE
Q 005473 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (695)
Q Consensus 480 ~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~ 559 (695)
..+..+.|++++ .++++|+.|+.|++|+. . + ..+..+.+|...|.
T Consensus 109 ~~v~~~~~s~~~---------------~~l~~~~~dg~i~i~~~-~----------------~---~~~~~~~~~~~~v~ 153 (425)
T 1r5m_A 109 NQVTCLAWSHDG---------------NSIVTGVENGELRLWNK-T----------------G---ALLNVLNFHRAPIV 153 (425)
T ss_dssp BCEEEEEECTTS---------------SEEEEEETTSCEEEEET-T----------------S---CEEEEECCCCSCEE
T ss_pred CceEEEEEcCCC---------------CEEEEEeCCCeEEEEeC-C----------------C---CeeeeccCCCccEE
Confidence 366777777755 78899999999999952 1 1 34566788999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE------------------------------------------------
Q 005473 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKS------------------------------------------------ 591 (695)
Q Consensus 560 ~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~------------------------------------------------ 591 (695)
+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 154 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d 233 (425)
T 1r5m_A 154 SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQ 233 (425)
T ss_dssp EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEE
T ss_pred EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEE
Confidence 99999999999999999999999998766543
Q ss_pred --------EecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 592 --------TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 592 --------~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
.+.+|...|.+++|+|++.+|++++.|+.|++||++++. ++..+.+|...|.+++|+|++ ++++++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~ 310 (425)
T 1r5m_A 234 ITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVGDD--KVISCSMDG 310 (425)
T ss_dssp TTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEETTT--EEEEEETTS
T ss_pred cCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECCCC--EEEEEeCCC
Confidence 334678889999999999999999999999999999866 478888999999999999998 677999999
Q ss_pred cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 664 EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|++||+++++++..+..|...|++++| +|+
T Consensus 311 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~-s~~ 341 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVDGVPIFAGRI-SQD 341 (425)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEE-CTT
T ss_pred cEEEEECCCCcEeEecccCCccEEEEEE-cCC
Confidence 9999999999999999999999999999 985
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.87 E-value=7.9e-21 Score=206.17 Aligned_cols=166 Identities=20% Similarity=0.216 Sum_probs=147.3
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIP-ASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~-~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
..+++++.|+.|++|+...+. ....+. .|...|++++|+|++++|++|+.||.|+|||+.
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~-------------------~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGS-------------------VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCC-------------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCEEEEECCCeEEEeeCCCCc-------------------EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 346778899999999764431 122222 388899999999999999999999999999999
Q ss_pred CCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcE
Q 005473 586 SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEI 665 (695)
Q Consensus 586 t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~I 665 (695)
+++.+..+.+|...|.+++|+ +.+|++|+.||.|++||++.....+..+.+|.+.|.+++|+|++. +|++|+.|+.|
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v 241 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNVV 241 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCE
T ss_pred CCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeE
Confidence 999999999999999999994 579999999999999999976667889999999999999999987 67799999999
Q ss_pred EEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 666 RYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 666 riWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++||+++++++..+.+|...|.+++| +|+
T Consensus 242 ~iwd~~~~~~~~~~~~~~~~v~~~~~-~p~ 270 (401)
T 4aez_A 242 QIWDARSSIPKFTKTNHNAAVKAVAW-CPW 270 (401)
T ss_dssp EEEETTCSSEEEEECCCSSCCCEEEE-CTT
T ss_pred EEccCCCCCccEEecCCcceEEEEEE-CCC
Confidence 99999999999999999999999999 984
No 69
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.87 E-value=3.2e-20 Score=192.78 Aligned_cols=167 Identities=18% Similarity=0.193 Sum_probs=146.6
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
+++++++.|+.|++|+.... .......+..|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~-----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAP-----------------TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC-------------------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECCCC-----------------CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 78899999999999976432 1134566778999999999999999999999999999999999
Q ss_pred CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEE
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIR 666 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~Ir 666 (695)
++.+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++. +..+ .|...|.+++|+|++. ++++++.|+.|+
T Consensus 173 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~~~~-~~~~~v~~~~~s~~~~-~l~~~~~~~~i~ 249 (337)
T 1gxr_A 173 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ-LQQH-DFTSQIFSLGYCPTGE-WLAVGMESSNVE 249 (337)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-EEEE-ECSSCEEEEEECTTSS-EEEEEETTSCEE
T ss_pred CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce-Eeee-cCCCceEEEEECCCCC-EEEEEcCCCcEE
Confidence 999999999999999999999999999999999999999998654 5554 4778899999999988 666888999999
Q ss_pred EEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 667 YWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 667 iWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+||+++++. ..+..|...|++++| +|+
T Consensus 250 ~~~~~~~~~-~~~~~~~~~v~~~~~-~~~ 276 (337)
T 1gxr_A 250 VLHVNKPDK-YQLHLHESCVLSLKF-AYC 276 (337)
T ss_dssp EEETTSSCE-EEECCCSSCEEEEEE-CTT
T ss_pred EEECCCCCe-EEEcCCccceeEEEE-CCC
Confidence 999998765 467789999999999 985
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.87 E-value=5.3e-21 Score=224.74 Aligned_cols=183 Identities=19% Similarity=0.265 Sum_probs=163.6
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
.++..+..+.|+|++ .++++|+.|+.|++|+...+ ..+..+.+|.+
T Consensus 11 ~h~~~v~~i~~sp~~---------------~~la~~~~~g~v~iwd~~~~-------------------~~~~~~~~~~~ 56 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTE---------------PWVLTTLYSGRVEIWNYETQ-------------------VEVRSIQVTET 56 (814)
T ss_dssp EECSCEEEEEECSSS---------------SEEEEEETTSEEEEEETTTT-------------------EEEEEEECCSS
T ss_pred cCCCceEEEEECCCC---------------CEEEEEeCCCEEEEEECCCC-------------------ceEEEEecCCC
Confidence 455678888888877 78999999999999966432 35667789999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF 636 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~ 636 (695)
.|.+++|+|++++|++|+.||.|+|||+.+++.+..+.+|.+.|++++|+|++.+|++++.||+|++||++++..+...+
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876778899
Q ss_pred ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCC-CcEEEEEEeCC
Q 005473 637 TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFF-ESFVSVRVVQP 694 (695)
Q Consensus 637 ~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~-~~VtsVaf~sP 694 (695)
.+|...|++++|+|++..+|++|+.||.|++||++++.+...+..|. ..|.+++| +|
T Consensus 137 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~-~~ 194 (814)
T 3mkq_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDY-YP 194 (814)
T ss_dssp ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEE-CC
T ss_pred cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEE-EE
Confidence 99999999999999434478899999999999999998888887655 89999999 87
No 71
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.7e-21 Score=204.35 Aligned_cols=210 Identities=7% Similarity=-0.020 Sum_probs=153.5
Q ss_pred cccccCCCCCceEEEEecCCCcccc----ccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeee
Q 005473 472 PTLQHNGASSKSLLMFGSDGMGSLT----SAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTE 547 (695)
Q Consensus 472 ~~l~~s~s~~~s~l~~~~dg~~~la----~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~ 547 (695)
..+...++.+..+..|.......+. .....+..+.. +++++.|++|++|..... ..+++..... .
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~-------~~~~~~~~~~---~ 116 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLYPGNQ-------ITILDSKTNK---V 116 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEETTTE-------EEEEETTTCC---E
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEEccCc-------eEEeecCCcc---e
Confidence 3456677788888888876542111 11111222223 889999999999965431 1223333322 2
Q ss_pred EEEe-cCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeEEEEec-ccCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 005473 548 FQLI-PASTSKVESCHFSP--DGKLLATGGHDKKAVLWCTESFTVKSTLE-EHTQWITDVRFSPSLSRLATSSADRTVRV 623 (695)
Q Consensus 548 v~~l-~~H~~~V~~v~fsp--dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~-~H~~~V~~v~~spdg~~LaTgs~DgtIrv 623 (695)
+..+ .+|.+.|.+++|+| ++++|++|+.||+|+|||+++++++..+. .|...|++++|+|++.+|++|+.||+|+|
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2222 36788999999999 99999999999999999999999877664 45668999999999999999999999999
Q ss_pred EECCCCCeeEEEEec-CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec---CCCcEE--EEEEeCCC
Q 005473 624 WDTENPDYSLRTFTG-HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN---FFESFV--SVRVVQPR 695 (695)
Q Consensus 624 WDl~t~~~~l~~~~g-h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~---h~~~Vt--sVaf~sPd 695 (695)
||++++......+.+ |.+.|++++|+|++. +|++++ |+.|++||+++++++..+.. |...+. +++| +|+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 271 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI-DDS 271 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE-CTT
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEE-CCC
Confidence 999998764377887 999999999999988 565777 55999999999887665543 444444 5999 885
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.87 E-value=1.3e-20 Score=194.87 Aligned_cols=163 Identities=21% Similarity=0.341 Sum_probs=135.1
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEE
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWC 583 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd--g~~LaSgs~Dg~V~IWD 583 (695)
..++++|+.|+.|++|+...+.. ......+..+..+.+|.+.|.+++|+|+ +++|++++.|+.|+|||
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~----------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd 140 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQE----------ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYD 140 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSC----------TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEecCCCcc----------cccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEec
Confidence 37899999999999998765432 1122344667788899999999999999 99999999999999999
Q ss_pred CCCCe------------------------------------------------------------EEEEecccCCCeEEE
Q 005473 584 TESFT------------------------------------------------------------VKSTLEEHTQWITDV 603 (695)
Q Consensus 584 l~t~~------------------------------------------------------------~~~~l~~H~~~V~~v 603 (695)
+++++ .+..+.+|...|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 220 (351)
T 3f3f_A 141 ALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSI 220 (351)
T ss_dssp CSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEE
T ss_pred CCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEE
Confidence 86532 145566899999999
Q ss_pred EEcCCC----CEEEEEeCCCeEEEEECCCCC---------------------------------------------eeEE
Q 005473 604 RFSPSL----SRLATSSADRTVRVWDTENPD---------------------------------------------YSLR 634 (695)
Q Consensus 604 ~~spdg----~~LaTgs~DgtIrvWDl~t~~---------------------------------------------~~l~ 634 (695)
+|+|++ .+|++|+.||+|++||++.+. .++.
T Consensus 221 ~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (351)
T 3f3f_A 221 SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLS 300 (351)
T ss_dssp EECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEE
T ss_pred EECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEE
Confidence 999998 799999999999999998641 3567
Q ss_pred EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEE
Q 005473 635 TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF 679 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~ 679 (695)
.+.+|...|++++|+|++. +|++|+.||.|+|||+.+++.+..+
T Consensus 301 ~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 301 EHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEecccccEEEEEEcCCCC-EEEEecCCCcEEEEecCcCcchhhe
Confidence 7889999999999999987 6779999999999999987544433
No 73
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.7e-20 Score=190.51 Aligned_cols=178 Identities=20% Similarity=0.274 Sum_probs=147.8
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCC---------------------------CccccccccCCCceeeeEEEecCCCCCe
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPR---------------------------DRVGRSAEVGKGFTFTEFQLIPASTSKV 558 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~---------------------------~~~~~~~d~~~~~~~~~v~~l~~H~~~V 558 (695)
..++++++.|+.|++|+........ +...++|+ ....+..+..|...|
T Consensus 71 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d-----~~~~~~~~~~~~~~v 145 (313)
T 3odt_A 71 KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK-----EGSLVYNLQAHNASV 145 (313)
T ss_dssp TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE-----TTEEEEEEECCSSCE
T ss_pred CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc-----CCcEEEecccCCCce
Confidence 3677888888888888665432111 11112222 124556778899999
Q ss_pred EEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEecc-cCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE
Q 005473 559 ESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEE-HTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF 636 (695)
Q Consensus 559 ~~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~-H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~ 636 (695)
.++.|++ ++++|++++.|+.|++|| ..+.+..+.. |...|.+++|+|++. |++++.|+.|++||+++++ ++..+
T Consensus 146 ~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~-~~~~~ 221 (313)
T 3odt_A 146 WDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD-VLRTY 221 (313)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC-EEEEE
T ss_pred eEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh-hhhhh
Confidence 9999988 899999999999999999 4567777777 999999999999987 9999999999999999876 48889
Q ss_pred ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 637 TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 637 ~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.+|...|++++|+|++. +++|+.||.|++||+++++++..+..|...|++++| +|+
T Consensus 222 ~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~-~~~ 277 (313)
T 3odt_A 222 EGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDC-MSN 277 (313)
T ss_dssp ECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEE-CTT
T ss_pred hcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEE-ccC
Confidence 99999999999999983 568999999999999999999999999999999999 885
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=2.6e-20 Score=204.83 Aligned_cols=166 Identities=17% Similarity=0.319 Sum_probs=144.3
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
+++++|+.|++|++|+...+ ..+..+.+|.+.|.+++|++++ +|++|+.||+|+|||+++
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~-------------------~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINK-------------------KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT-------------------EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred CEEEEEcCCCcEEEEECCCC-------------------cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 68999999999999965432 4567788999999999999988 999999999999999999
Q ss_pred CeEEEEecccCCCeEEEEEc--CCCCEEEEEeCCCeEEEEECCCCC----------------------------------
Q 005473 587 FTVKSTLEEHTQWITDVRFS--PSLSRLATSSADRTVRVWDTENPD---------------------------------- 630 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~s--pdg~~LaTgs~DgtIrvWDl~t~~---------------------------------- 630 (695)
++++..+.+|.+.|.+++|+ +++.+|++|+.|++|++||+++..
T Consensus 193 ~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 193 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 99999999999999999998 466777777777777777765421
Q ss_pred ----------------------------eeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 631 ----------------------------YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 631 ----------------------------~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
.++..+.+|...|++++|+|++. ++++|+.||.|++||+++++++..+.+|
T Consensus 273 v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 273 VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEEeCC
Confidence 13455678999999999999988 6679999999999999999999999999
Q ss_pred CCcEEEEEEeCC
Q 005473 683 FESFVSVRVVQP 694 (695)
Q Consensus 683 ~~~VtsVaf~sP 694 (695)
...|++++| ++
T Consensus 352 ~~~v~~~~~-~~ 362 (464)
T 3v7d_B 352 TALVGLLRL-SD 362 (464)
T ss_dssp SSCEEEEEE-CS
T ss_pred CCcEEEEEE-cC
Confidence 999999999 75
No 75
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.87 E-value=4e-21 Score=201.92 Aligned_cols=191 Identities=19% Similarity=0.286 Sum_probs=154.1
Q ss_pred cccCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEe--
Q 005473 474 LQHNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI-- 551 (695)
Q Consensus 474 l~~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l-- 551 (695)
+...+..++..+.|+|+.. +....+++++.++.|++|+...+. ....+...
T Consensus 13 ~~~~h~~~v~~i~~~p~~~-----------~~~~~~~~~~~~~~v~vw~~~~~~----------------~~~~~~~~~~ 65 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSK-----------EGDPLVFATVGSNRVTLYECHSQG----------------EIRLLQSYVD 65 (366)
T ss_dssp EECTTCSCEEEEEECTTCC-----------TTSCEEEEEEETTEEEEEEECGGG----------------CEEEEEEEEC
T ss_pred eecCCCCceEEEEEecccC-----------CCCceEEEECCCCEEEEEEcCCCc----------------EEEeeeeccc
Confidence 3345677899999998621 112555666667799999764321 11222222
Q ss_pred cCCCCCeEEEEEcCC----CCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEC
Q 005473 552 PASTSKVESCHFSPD----GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDT 626 (695)
Q Consensus 552 ~~H~~~V~~v~fspd----g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~sp-dg~~LaTgs~DgtIrvWDl 626 (695)
..|...|++++|+|+ +++|++|+.||.|+|||+.+++++..+.+|...|.+++|+| ++.+|++|+.||+|++||+
T Consensus 66 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 66 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp SCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred cCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 247788999999999 67999999999999999999999999999999999999999 8999999999999999999
Q ss_pred CCCCeeEEEE---ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec----------------------
Q 005473 627 ENPDYSLRTF---TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN---------------------- 681 (695)
Q Consensus 627 ~t~~~~l~~~---~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~---------------------- 681 (695)
++++ ++..+ .+|...|.+++|+|++. +|++|+.||.|++||+++++++..+..
T Consensus 146 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 146 QTDT-LVAIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp TTTE-EEEEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred ecCe-EEEEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 9865 46776 68999999999999987 666999999999999998766544443
Q ss_pred ------CCCcEEEEEEeCC
Q 005473 682 ------FFESFVSVRVVQP 694 (695)
Q Consensus 682 ------h~~~VtsVaf~sP 694 (695)
|...|++|+| ++
T Consensus 224 ~~~~~~~~~~v~~~~~-~~ 241 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRW-LG 241 (366)
T ss_dssp EEECSSCSSCCCEEEE-ET
T ss_pred cccccCCcceEEEEEE-cC
Confidence 9999999998 53
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.87 E-value=1.8e-20 Score=200.75 Aligned_cols=157 Identities=21% Similarity=0.170 Sum_probs=132.7
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
.++++++.|+.|++|+... .....+....+|...|.+++|+|++++|++|+.|+.|+|||+ +
T Consensus 132 ~~l~s~~~d~~i~iwd~~~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~ 193 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG-----------------SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-D 193 (383)
T ss_dssp EEEEEEETTTEEEEEETTS-----------------CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-T
T ss_pred CEEEEEeCCCEEEEEECCC-----------------CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-C
Confidence 7899999999999996642 112223333456688999999999999999999999999999 5
Q ss_pred CeEEEEecccCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCC---CeeEEEEecCCCCeEEEEEec-CCCeEEEEEeC
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTENP---DYSLRTFTGHSTTVMSLDFHP-SKEDLLCSCDN 661 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg~-~LaTgs~DgtIrvWDl~t~---~~~l~~~~gh~~~V~sl~fsp-dg~~llaSgs~ 661 (695)
++++..+.+|...|.+++|+|++. +|++++.|++|++||+++. ..++..+ +|...|++++|+| ++. +|++++.
T Consensus 194 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~~ 271 (383)
T 3ei3_B 194 GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLLTTDQ 271 (383)
T ss_dssp SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEEEEES
T ss_pred CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEEEEcC
Confidence 778889999999999999999998 9999999999999999873 2235555 6999999999999 877 6679999
Q ss_pred CCcEEEEECCCCeEEEEEecCC
Q 005473 662 NSEIRYWSINNGSCAGVFKNFF 683 (695)
Q Consensus 662 Dg~IriWDl~tg~~v~~~~~h~ 683 (695)
|+.|++||+++++++..+.+|.
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECC
T ss_pred CCcEEEEECCCCcccccccccc
Confidence 9999999999998887777653
No 77
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=8.9e-21 Score=224.06 Aligned_cols=186 Identities=16% Similarity=0.210 Sum_probs=160.3
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+.++.|++++ .++++|+.|++|++|+... .....+..+.+|.
T Consensus 6 ~gH~~~V~~l~~s~dg---------------~~latg~~dg~I~vwd~~~-----------------~~~~~~~~l~~h~ 53 (753)
T 3jro_A 6 NAHNELIHDAVLDYYG---------------KRLATCSSDKTIKIFEVEG-----------------ETHKLIDTLTGHE 53 (753)
T ss_dssp --CCCCEEEECCCSSS---------------CCEEEEETTTEEEEEEEET-----------------TEEEEEEEECCCS
T ss_pred ccCcceeEEEEECCCC---------------CeEEEEECCCcEEEEecCC-----------------CCCccceeccCCc
Confidence 3455678888888766 6789999999999996532 1335677889999
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCe--EEEEecccCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCC
Q 005473 556 SKVESCHFSPD--GKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPS--LSRLATSSADRTVRVWDTENP 629 (695)
Q Consensus 556 ~~V~~v~fspd--g~~LaSgs~Dg~V~IWDl~t~~--~~~~l~~H~~~V~~v~~spd--g~~LaTgs~DgtIrvWDl~t~ 629 (695)
+.|++++|+++ +++|++|+.||.|+|||+.+++ .+..+.+|...|++++|+|+ +.+|++|+.||+|++||++++
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 99999999988 9999999999999999999887 77788899999999999999 999999999999999999876
Q ss_pred C-eeEEEEecCCCCeEEEEEecC-------------CCeEEEEEeCCCcEEEEECCCC----eEEEEEecCCCcEEEEEE
Q 005473 630 D-YSLRTFTGHSTTVMSLDFHPS-------------KEDLLCSCDNNSEIRYWSINNG----SCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 630 ~-~~l~~~~gh~~~V~sl~fspd-------------g~~llaSgs~Dg~IriWDl~tg----~~v~~~~~h~~~VtsVaf 691 (695)
. .....+.+|...|++++|+|. +. ++++|+.||.|++||++++ .++..+.+|.++|++|+|
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 3 235677889999999999994 55 6779999999999999877 677888899999999999
Q ss_pred eCCC
Q 005473 692 VQPR 695 (695)
Q Consensus 692 ~sPd 695 (695)
+|+
T Consensus 213 -sp~ 215 (753)
T 3jro_A 213 -SPT 215 (753)
T ss_dssp -CCC
T ss_pred -ccC
Confidence 985
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5e-20 Score=193.41 Aligned_cols=144 Identities=20% Similarity=0.314 Sum_probs=128.7
Q ss_pred EEEecCCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 005473 548 FQLIPASTS--KVESCHFSPDGKLLATGGHDKKAVLWCTES-FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVW 624 (695)
Q Consensus 548 v~~l~~H~~--~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t-~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvW 624 (695)
+..+..|.. .|.+++|+|++++|++++.||.|++||+++ .+.+..+..|...|.+++|+|++.+|++++.|+.|++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLV 245 (369)
T ss_dssp SEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEE
Confidence 344455665 899999999999999999999999999998 78889999999999999999999999999999999999
Q ss_pred ECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC--------------cEEEEECCCCeEEEEEecCCCcEEEEE
Q 005473 625 DTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS--------------EIRYWSINNGSCAGVFKNFFESFVSVR 690 (695)
Q Consensus 625 Dl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg--------------~IriWDl~tg~~v~~~~~h~~~VtsVa 690 (695)
|++++.. +..+. +...+.+++|+|++..+ ++++.++ .|++||+.+++++..+.+|...|++++
T Consensus 246 d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 322 (369)
T 3zwl_B 246 DVSTLQV-LKKYE-TDCPLNTAVITPLKEFI-ILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVA 322 (369)
T ss_dssp ETTTCCE-EEEEE-CSSCEEEEEECSSSSEE-EEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred ECCCCce-eeeec-CCCCceeEEecCCCceE-EEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEE
Confidence 9998764 66666 77889999999999854 4666666 899999999999999999999999999
Q ss_pred EeCCC
Q 005473 691 VVQPR 695 (695)
Q Consensus 691 f~sPd 695 (695)
| +|+
T Consensus 323 ~-s~~ 326 (369)
T 3zwl_B 323 I-SPQ 326 (369)
T ss_dssp E-CTT
T ss_pred E-CCC
Confidence 9 985
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.5e-20 Score=205.04 Aligned_cols=187 Identities=13% Similarity=0.127 Sum_probs=150.3
Q ss_pred cCCCCCceEEEEec-CCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCC
Q 005473 476 HNGASSKSLLMFGS-DGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAS 554 (695)
Q Consensus 476 ~s~s~~~s~l~~~~-dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H 554 (695)
..+...+..+.|++ ++ .++++|+.|++|++|+..... .+........+ +|
T Consensus 60 ~~h~~~V~~~~~s~~~~---------------~~l~s~s~dg~v~vwd~~~~~-------------~~~~~~~~~~~-~h 110 (437)
T 3gre_A 60 ENEPNSITSSAVSPGET---------------PYLITGSDQGVIKIWNLKEII-------------VGEVYSSSLTY-DC 110 (437)
T ss_dssp TTTTSCEEEEEEECSSS---------------CEEEEEETTSEEEEEEHHHHH-------------TTCCCSCSEEE-EC
T ss_pred cCCCCceEEEEECCCCC---------------CEEEEecCCceEEEeECcccc-------------cCcccceeeec-cC
Confidence 34567888889988 65 789999999999999753310 01111112222 58
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC---CCeEEEEecc------------cCCCeEEEE--EcCCCCEEEEEeC
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTE---SFTVKSTLEE------------HTQWITDVR--FSPSLSRLATSSA 617 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~---t~~~~~~l~~------------H~~~V~~v~--~spdg~~LaTgs~ 617 (695)
...|++|+|+|++++|++|+.||+|+|||++ +++.+..+.+ +...+.++. +++++.+|++|+.
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 9999999999999999999999999999994 4444433322 456677777 5678999999999
Q ss_pred CCeEEEEECCCCCeeEEEEec--CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe-cCCCcEEEEEEeCC
Q 005473 618 DRTVRVWDTENPDYSLRTFTG--HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK-NFFESFVSVRVVQP 694 (695)
Q Consensus 618 DgtIrvWDl~t~~~~l~~~~g--h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~-~h~~~VtsVaf~sP 694 (695)
|++|++||++++.. +..+.+ |.+.|++++|+|++. +|++|+.||.|++||+++++++..+. .|..+|++|+| +|
T Consensus 191 d~~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~-~~ 267 (437)
T 3gre_A 191 LSRVIIFDIRTLER-LQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV-CQ 267 (437)
T ss_dssp TSEEEEEETTTCCE-EEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE-CT
T ss_pred CCeEEEEeCCCCee-eEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe-cc
Confidence 99999999998664 788887 889999999999987 67799999999999999999999987 88889999987 76
No 80
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.86 E-value=4.9e-21 Score=206.00 Aligned_cols=185 Identities=12% Similarity=0.279 Sum_probs=156.5
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|++++ .++++|+.|+.|++|+...... ....+..+.+|...
T Consensus 66 ~~~~v~~~~~s~~~---------------~~l~~~~~dg~v~vw~~~~~~~---------------~~~~~~~~~~h~~~ 115 (416)
T 2pm9_A 66 VDSKFNDLDWSHNN---------------KIIAGALDNGSLELYSTNEANN---------------AINSMARFSNHSSS 115 (416)
T ss_dssp CSSCEEEEEECSSS---------------SCEEEEESSSCEEEECCSSTTS---------------CCCEEEECCCSSSC
T ss_pred cCCceEEEEECCCC---------------CeEEEEccCCeEEEeecccccc---------------cccchhhccCCccc
Confidence 34567777777765 6789999999999997643210 11356778899999
Q ss_pred eEEEEEcCC-CCEEEEEeCCCcEEEEECCCCe------EEEE---ecccCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEC
Q 005473 558 VESCHFSPD-GKLLATGGHDKKAVLWCTESFT------VKST---LEEHTQWITDVRFSPS-LSRLATSSADRTVRVWDT 626 (695)
Q Consensus 558 V~~v~fspd-g~~LaSgs~Dg~V~IWDl~t~~------~~~~---l~~H~~~V~~v~~spd-g~~LaTgs~DgtIrvWDl 626 (695)
|.+++|+|+ +++|++|+.|+.|+|||+++++ .... +.+|...|.+++|+|+ +.+|++++.|+.|++||+
T Consensus 116 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 195 (416)
T 2pm9_A 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDL 195 (416)
T ss_dssp CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEET
T ss_pred eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEEC
Confidence 999999998 8999999999999999998876 3322 3679999999999998 789999999999999999
Q ss_pred CCCCeeEEEEecC------CCCeEEEEEecCCCeEEEEEeCCC---cEEEEECCCC-eEEEEEe-cCCCcEEEEEEeCC
Q 005473 627 ENPDYSLRTFTGH------STTVMSLDFHPSKEDLLCSCDNNS---EIRYWSINNG-SCAGVFK-NFFESFVSVRVVQP 694 (695)
Q Consensus 627 ~t~~~~l~~~~gh------~~~V~sl~fspdg~~llaSgs~Dg---~IriWDl~tg-~~v~~~~-~h~~~VtsVaf~sP 694 (695)
++++ ++..+..| ...|.+++|+|++..++++++.|+ .|++||++++ .++..+. +|...|++|+| +|
T Consensus 196 ~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~-s~ 272 (416)
T 2pm9_A 196 KAKK-EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDW-CH 272 (416)
T ss_dssp TTTE-EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEE-CS
T ss_pred CCCC-cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEe-CC
Confidence 9865 47777766 788999999999877888999998 9999999986 7888888 99999999999 88
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.86 E-value=8.2e-20 Score=190.56 Aligned_cols=183 Identities=20% Similarity=0.280 Sum_probs=145.1
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCC--------------------------CCCccccccccCCCceeeeEEEecCCCCCeE
Q 005473 506 DRFVDDGSLDDNVESFLSPDDAD--------------------------PRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~--------------------------~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~ 559 (695)
..++++|+.|+.|++|....... ..+....+|+.... ......+.+|...|.
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~--~~~~~~~~~~~~~v~ 175 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV--CKYTVQDESHSEWVS 175 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC--EEEEECSSSCSSCEE
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCC--ceEEEEeccccCccc
Confidence 36788888888888886544310 01112233333222 233445678999999
Q ss_pred EEEEcCCC--CEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEe
Q 005473 560 SCHFSPDG--KLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFT 637 (695)
Q Consensus 560 ~v~fspdg--~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~ 637 (695)
+++|++++ .++++++.|+.|++||+++++++..+.+|.+.|++++|+|++.+|++|+.|++|++||+++.. ++..+.
T Consensus 176 ~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~-~~~~~~ 254 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK-HLYTLD 254 (340)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE-EEEEEE
T ss_pred ceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc-eeeeec
Confidence 99998865 578999999999999999999999999999999999999999999999999999999999865 477776
Q ss_pred cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe---------cCCCcEEEEEEeCCC
Q 005473 638 GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK---------NFFESFVSVRVVQPR 695 (695)
Q Consensus 638 gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~---------~h~~~VtsVaf~sPd 695 (695)
++ ..|.+++|+|++. ++ +++.|+.|++||++++.++..++ +|...|++|+| +|+
T Consensus 255 ~~-~~v~~~~~~~~~~-~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s~d 317 (340)
T 4aow_A 255 GG-DIINALCFSPNRY-WL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW-SAD 317 (340)
T ss_dssp CS-SCEEEEEECSSSS-EE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE-CTT
T ss_pred CC-ceEEeeecCCCCc-ee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE-CCC
Confidence 54 6799999999865 45 56679999999999988776654 68899999999 986
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=8e-21 Score=203.34 Aligned_cols=186 Identities=13% Similarity=0.072 Sum_probs=154.9
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
..+...+..+.|++ .++++|+.|+.|++|+...... ...+..+..+.+|.
T Consensus 13 ~~h~~~i~~~~~~~-----------------~~l~s~~~dg~i~iw~~~~~~~-------------~~~~~~~~~~~~h~ 62 (397)
T 1sq9_A 13 KAHDADIFSVSACN-----------------SFTVSCSGDGYLKVWDNKLLDN-------------ENPKDKSYSHFVHK 62 (397)
T ss_dssp SCSSSCEEEEEECS-----------------SEEEEEETTSEEEEEESBCCTT-------------CCGGGGEEEEECCT
T ss_pred hhhhcCeEEEEecC-----------------CeEEEEcCCCEEEEEECCCccc-------------ccCCCcceEEecCC
Confidence 34556777777765 5789999999999997754421 11234566778999
Q ss_pred CCeEEEEEcCC----C---CEEEEEeCCCcEEEEECCCCeE-----EEEeccc-----CCCeEEEEEc----CCCCE-EE
Q 005473 556 SKVESCHFSPD----G---KLLATGGHDKKAVLWCTESFTV-----KSTLEEH-----TQWITDVRFS----PSLSR-LA 613 (695)
Q Consensus 556 ~~V~~v~fspd----g---~~LaSgs~Dg~V~IWDl~t~~~-----~~~l~~H-----~~~V~~v~~s----pdg~~-La 613 (695)
..|++++|+++ + ++|++++.|+.|+|||+.+++. +..+..| ...|.+++|+ |++.+ |+
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 142 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEE
Confidence 99999999999 9 9999999999999999988876 8888888 5999999999 99999 99
Q ss_pred EEeCCCeEEEEECCC------CCeeEE-----EE-------ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeE
Q 005473 614 TSSADRTVRVWDTEN------PDYSLR-----TF-------TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSC 675 (695)
Q Consensus 614 Tgs~DgtIrvWDl~t------~~~~l~-----~~-------~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~ 675 (695)
+++.|+.|++||+++ +.. +. .+ ..|...|++++|+|++ +|++|+.||.|++||++++++
T Consensus 143 ~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~ 219 (397)
T 1sq9_A 143 ATDVKGTTYIWKFHPFADESNSLT-LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRP 219 (397)
T ss_dssp EEETTSCEEEEEEESSSSHHHHTT-TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEE
T ss_pred EEeCCCcEEEEeCCccccccccce-eeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCce
Confidence 999999999999987 443 33 56 4488999999999998 777999999999999999999
Q ss_pred EEEEec---C---CCcEEEEEEeCCC
Q 005473 676 AGVFKN---F---FESFVSVRVVQPR 695 (695)
Q Consensus 676 v~~~~~---h---~~~VtsVaf~sPd 695 (695)
+..+.. | ...|++|+| +|+
T Consensus 220 ~~~~~~~~~h~~~~~~i~~i~~-~~~ 244 (397)
T 1sq9_A 220 LYNFESQHSMINNSNSIRSVKF-SPQ 244 (397)
T ss_dssp EEEEECCC---CCCCCEEEEEE-CSS
T ss_pred eEEEeccccccccCCccceEEE-CCC
Confidence 999999 9 999999999 985
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.86 E-value=7.5e-20 Score=199.89 Aligned_cols=188 Identities=19% Similarity=0.332 Sum_probs=150.1
Q ss_pred CCCCcEEEEeeCCCcEEEEeCCCCCCC------------------------CCccccccccCCCceeeeEEEecCCCCCe
Q 005473 503 TDMDRFVDDGSLDDNVESFLSPDDADP------------------------RDRVGRSAEVGKGFTFTEFQLIPASTSKV 558 (695)
Q Consensus 503 ~~~~~~lasgS~D~~V~lw~~~~~~~~------------------------~~~~~~~~d~~~~~~~~~v~~l~~H~~~V 558 (695)
.+...++++|+.|++|++|+...+... .+....+|+.... ...+..+.+|...|
T Consensus 156 spdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~--~~~~~~~~~h~~~~ 233 (420)
T 4gga_A 156 IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEV 233 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCE
T ss_pred CCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeeccc--ceeeEEecccccce
Confidence 334589999999999999988654211 1111223332221 24567788999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCe----EEEEecccCCCeEEEEEcCCC-CEEEEE--eCCCeEEEEECCCCCe
Q 005473 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFT----VKSTLEEHTQWITDVRFSPSL-SRLATS--SADRTVRVWDTENPDY 631 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~----~~~~l~~H~~~V~~v~~spdg-~~LaTg--s~DgtIrvWDl~t~~~ 631 (695)
.++.|++++++|++++.|+.|+|||+.+++ .+.....|.+.|.+++|+|.+ .+++++ +.|++|+|||+.++.
T Consensus 234 ~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~- 312 (420)
T 4gga_A 234 CGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA- 312 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE-
T ss_pred eeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc-
Confidence 999999999999999999999999998764 456778899999999999964 566554 579999999999866
Q ss_pred eEEEEecCCCCeEEEEEecCCCeEEEEE-eCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 632 SLRTFTGHSTTVMSLDFHPSKEDLLCSC-DNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 632 ~l~~~~gh~~~V~sl~fspdg~~llaSg-s~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++..+..| ..|.++.|+|++..+++++ +.|+.|+|||+.+++++.++.+|.+.|++|+| +|+
T Consensus 313 ~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~-spd 375 (420)
T 4gga_A 313 CLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM-SPD 375 (420)
T ss_dssp EEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE-CTT
T ss_pred cceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE-cCC
Confidence 46666655 5799999999999777554 37999999999999999999999999999999 996
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.86 E-value=1.5e-20 Score=197.14 Aligned_cols=183 Identities=15% Similarity=0.229 Sum_probs=151.0
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeC---CCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSL---DDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPA 553 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~---D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~ 553 (695)
.+...+..+.|+|++. .++++|+. |+.|++|+...+. ... ....+
T Consensus 16 ~h~~~v~~~~~~p~~~--------------~l~~~~s~~~~d~~v~iw~~~~~~-----------------~~~-~~~~~ 63 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSA--------------KFVTMGNFARGTGVIQLYEIQHGD-----------------LKL-LREIE 63 (357)
T ss_dssp ECSSCEEEEEECTTSS--------------EEEEEEC--CCCEEEEEEEECSSS-----------------EEE-EEEEE
T ss_pred CCCCceEEEEEcCCCc--------------eEEEecCccCCCcEEEEEeCCCCc-----------------ccc-eeeec
Confidence 3667888999998775 67888887 9999999764331 111 12237
Q ss_pred CCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCe-EEEEecccCCCeEEEEE------cCCCCEEEEEeCCCeEEE
Q 005473 554 STSKVESCHFSPD---GKLLATGGHDKKAVLWCTESFT-VKSTLEEHTQWITDVRF------SPSLSRLATSSADRTVRV 623 (695)
Q Consensus 554 H~~~V~~v~fspd---g~~LaSgs~Dg~V~IWDl~t~~-~~~~l~~H~~~V~~v~~------spdg~~LaTgs~DgtIrv 623 (695)
|...|.+++|+|+ +++|++|+.||.|+|||+.+++ ++..+.+|...|.+++| +|++.+|++++.|++|++
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~v 143 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKV 143 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEE
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEE
Confidence 8899999999998 6999999999999999999888 88899999999999965 678999999999999999
Q ss_pred EECCCCCeeEEEEecCCC----CeEEEE----EecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 624 WDTENPDYSLRTFTGHST----TVMSLD----FHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 624 WDl~t~~~~l~~~~gh~~----~V~sl~----fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
||++++..++..+..|.+ .|.+++ |+|++. ++++|+.||.|++||+++++++.. ..|...|++++| +|
T Consensus 144 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~-~~ 219 (357)
T 3i2n_A 144 WDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEF-DR 219 (357)
T ss_dssp ECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEE-SC
T ss_pred EeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCceeee-cCCCCceEEEEc-CC
Confidence 999987756778876655 789998 677877 677999999999999999987554 578899999999 88
No 85
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.6e-20 Score=207.10 Aligned_cols=182 Identities=15% Similarity=0.122 Sum_probs=151.2
Q ss_pred CCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEe--cCCCC
Q 005473 479 ASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI--PASTS 556 (695)
Q Consensus 479 s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l--~~H~~ 556 (695)
...+..+.|++++. .++++|+.|+.|++|+.... .+ ..+..+ ..|..
T Consensus 102 ~~~v~~~~~s~d~~--------------~l~~~~~~dg~v~iwd~~~~--------------~~---~~~~~~~~~~~~~ 150 (450)
T 2vdu_B 102 YSYIRNLRLTSDES--------------RLIACADSDKSLLVFDVDKT--------------SK---NVLKLRKRFCFSK 150 (450)
T ss_dssp CCCEEEEEECTTSS--------------EEEEEEGGGTEEEEEEECSS--------------SS---SCEEEEEEEECSS
T ss_pred CCceEEEEEcCCCC--------------EEEEEECCCCeEEEEECcCC--------------CC---ceeeeeecccCCC
Confidence 34788899999873 34599999999999976411 01 122233 25778
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE----EecccCCCeEEEEEcCC---CCEEEEEeCCCeEEEEECCCC
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS----TLEEHTQWITDVRFSPS---LSRLATSSADRTVRVWDTENP 629 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~----~l~~H~~~V~~v~~spd---g~~LaTgs~DgtIrvWDl~t~ 629 (695)
.|.+++|+|++++|++|+.|+.|++||+.++.... .+.+|...|++++|+|+ +.+|++|+.|++|++||++++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 89999999999999999999999999998876544 77889999999999999 899999999999999999987
Q ss_pred CeeEEE-EecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC-------------------------C
Q 005473 630 DYSLRT-FTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF-------------------------F 683 (695)
Q Consensus 630 ~~~l~~-~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h-------------------------~ 683 (695)
.. +.. +.+|...|++++|+ ++. +|++|+.|+.|++||+++++++..+..+ .
T Consensus 231 ~~-~~~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 231 FI-VDKWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp TC-EEEECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred ce-eeeeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 75 554 66999999999999 877 6779999999999999999999988733 3
Q ss_pred CcEEEEEEeCCC
Q 005473 684 ESFVSVRVVQPR 695 (695)
Q Consensus 684 ~~VtsVaf~sPd 695 (695)
..|.+|+| +|+
T Consensus 308 ~~v~~i~~-~~~ 318 (450)
T 2vdu_B 308 FAVSKIIK-SKN 318 (450)
T ss_dssp CCEEEEEE-CSS
T ss_pred EEEEEEEE-eCC
Confidence 57889999 875
No 86
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.86 E-value=8.9e-20 Score=194.59 Aligned_cols=190 Identities=14% Similarity=0.291 Sum_probs=157.3
Q ss_pred CCCCCceEEEEec-CCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEE-----E
Q 005473 477 NGASSKSLLMFGS-DGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQ-----L 550 (695)
Q Consensus 477 s~s~~~s~l~~~~-dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~-----~ 550 (695)
.+...+..+.|++ ++ .++++|+.|+.|++|+......... ....... .
T Consensus 41 ~h~~~v~~~~~s~~~~---------------~~l~~~~~dg~i~iw~~~~~~~~~~-----------~~~~~~~~~~~~~ 94 (408)
T 4a11_B 41 IHGGGINTLDIEPVEG---------------RYMLSGGSDGVIVLYDLENSSRQSY-----------YTCKAVCSIGRDH 94 (408)
T ss_dssp CCSSCEEEEEECTTTC---------------CEEEEEETTSCEEEEECCCCSSSSC-----------EEECEEEEECTTC
T ss_pred ccCCcEEEEEEecCCC---------------CEEEEEcCCCeEEEEECCCCcccce-----------Eeccccccccccc
Confidence 3566888888888 55 7899999999999998765432111 0111111 1
Q ss_pred ecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCC---CCEEEEEeCCCeEEEEEC
Q 005473 551 IPASTSKVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPS---LSRLATSSADRTVRVWDT 626 (695)
Q Consensus 551 l~~H~~~V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spd---g~~LaTgs~DgtIrvWDl 626 (695)
..+|...|.+++|+| ++++|++++.|+.|+|||+++++.+..+. +...+.++.|+|. +.+|++++.|+.|++||+
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 236999999999999 77899999999999999999999888776 7888999999984 459999999999999999
Q ss_pred CCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCe-EEEEE---------------ecCCCcEEEEE
Q 005473 627 ENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGS-CAGVF---------------KNFFESFVSVR 690 (695)
Q Consensus 627 ~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~-~v~~~---------------~~h~~~VtsVa 690 (695)
+++.. +..+.+|.+.|.+++|+|+++.++++|+.||.|++||++++. ++..+ .+|...|++++
T Consensus 174 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 174 KSGSC-SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSSCC-CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred CCcce-eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 98664 788999999999999999999888899999999999998865 55655 57899999999
Q ss_pred EeCCC
Q 005473 691 VVQPR 695 (695)
Q Consensus 691 f~sPd 695 (695)
| +|+
T Consensus 253 ~-~~~ 256 (408)
T 4a11_B 253 F-TSD 256 (408)
T ss_dssp E-CTT
T ss_pred E-cCC
Confidence 9 985
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.5e-20 Score=189.27 Aligned_cols=194 Identities=19% Similarity=0.286 Sum_probs=158.9
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCC--------------------------C
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDAD--------------------------P 529 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~--------------------------~ 529 (695)
..+...+..+.| +++ .++++|+.|+.|++|+...... .
T Consensus 15 ~~h~~~v~~~~~-~~~---------------~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDD---------------SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp CCCSSCEEEEEE-EET---------------TEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred hCCCCCcEEEEe-cCC---------------CEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec
Confidence 345567777777 655 6789999999999998754310 0
Q ss_pred CCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcC-C
Q 005473 530 RDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP-S 608 (695)
Q Consensus 530 ~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~sp-d 608 (695)
.+...++|+.........+..+.+|...|.+++| ++++|++++.|+.|++|| .++.+..+..|...|.+++|.| +
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~ 154 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFS 154 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETT
T ss_pred CCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCC
Confidence 1112244444444444556778899999999999 678999999999999999 6788889999999999999988 8
Q ss_pred CCEEEEEeCCCeEEEEECCCCCeeEEEEec-CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEE
Q 005473 609 LSRLATSSADRTVRVWDTENPDYSLRTFTG-HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFV 687 (695)
Q Consensus 609 g~~LaTgs~DgtIrvWDl~t~~~~l~~~~g-h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~Vt 687 (695)
+.+|++++.|+.|++||.. ..+..+.. |...|.+++|+|++. +++|+.||.|++||+++++++..+.+|...|+
T Consensus 155 ~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 229 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY 229 (313)
T ss_dssp TTEEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCEEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchhhhhhhhcCCceEE
Confidence 9999999999999999943 34677776 899999999999987 66899999999999999999999999999999
Q ss_pred EEEEeCCC
Q 005473 688 SVRVVQPR 695 (695)
Q Consensus 688 sVaf~sPd 695 (695)
+++| +|+
T Consensus 230 ~~~~-~~~ 236 (313)
T 3odt_A 230 CIKL-LPN 236 (313)
T ss_dssp EEEE-CTT
T ss_pred EEEE-ecC
Confidence 9999 985
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.86 E-value=4.2e-20 Score=228.12 Aligned_cols=167 Identities=25% Similarity=0.440 Sum_probs=148.8
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
.+...+..+.|++++ .++++|+.|++|++|+...+ ..+..+.+|.+
T Consensus 613 ~h~~~v~~~~~s~~~---------------~~l~s~~~d~~i~vw~~~~~-------------------~~~~~~~~h~~ 658 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDG---------------QRIASCGADKTLQVFKAETG-------------------EKLLDIKAHED 658 (1249)
T ss_dssp CCSSCEEEEEECTTS---------------SEEEEEETTSCEEEEETTTC-------------------CEEEEECCCSS
T ss_pred cccccEEEEEECCCC---------------CEEEEEeCCCeEEEEECCCC-------------------CEEEEeccCCC
Confidence 456678888888876 78999999999999976433 35667889999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcC--CCCEEEEEeCCCeEEEEECCCCCeeEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSP--SLSRLATSSADRTVRVWDTENPDYSLR 634 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~sp--dg~~LaTgs~DgtIrvWDl~t~~~~l~ 634 (695)
.|.+|+|+|++++|++|+.|++|+|||+.+++++..+.+|...|.+++|+| ++.++++|+.|++|++||++++. ++.
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~ 737 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-CRN 737 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-EEE
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-hhh
Confidence 999999999999999999999999999999999999999999999999999 55689999999999999999876 588
Q ss_pred EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEE
Q 005473 635 TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF 679 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~ 679 (695)
.+.+|.+.|++++|+|++. ++++|+.||.|++||+++++++..+
T Consensus 738 ~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 738 TMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp EECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred eecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCccccee
Confidence 9999999999999999988 6779999999999999887766554
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.3e-21 Score=207.52 Aligned_cols=133 Identities=14% Similarity=0.185 Sum_probs=114.2
Q ss_pred eeEEEecC--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEec-ccCCCeEEEEEcC----CCCEEEEEeCC
Q 005473 546 TEFQLIPA--STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE-EHTQWITDVRFSP----SLSRLATSSAD 618 (695)
Q Consensus 546 ~~v~~l~~--H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~-~H~~~V~~v~~sp----dg~~LaTgs~D 618 (695)
..+..+.+ |.+.|++++|+|++++|++|+.||.|+|||+++++++..+. .|...|.+++|+| ++.+|++|+.|
T Consensus 203 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 203 ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence 45566676 88999999999999999999999999999999999999886 7888999997765 57799999999
Q ss_pred CeEEEEECCCCCeeEEEEec--------------------------CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 619 RTVRVWDTENPDYSLRTFTG--------------------------HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 619 gtIrvWDl~t~~~~l~~~~g--------------------------h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
++|+|||++++. ++..+.+ |...|++++|+ ++ .+|++|+.|+.|++||+.+
T Consensus 283 g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 283 TFLTIWNFVKGH-CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp EEEEEEETTTTE-EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEEETTC
T ss_pred CcEEEEEcCCCc-EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEEECCC
Confidence 999999999865 3666554 44568889999 55 4788999999999999999
Q ss_pred CeEEEEEec
Q 005473 673 GSCAGVFKN 681 (695)
Q Consensus 673 g~~v~~~~~ 681 (695)
++++..+.+
T Consensus 360 ~~~~~~~~~ 368 (437)
T 3gre_A 360 LSSSKAVIS 368 (437)
T ss_dssp GGGCEEEEC
T ss_pred cccceEEec
Confidence 998888776
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=4e-21 Score=218.36 Aligned_cols=172 Identities=12% Similarity=0.106 Sum_probs=136.0
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC------CCEEEEEeCCCcEE
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD------GKLLATGGHDKKAV 580 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd------g~~LaSgs~Dg~V~ 580 (695)
.++++++.|++|++|+...+.. ......++.+|.+.|.+|+|+|+ +.+||+|+.||+|+
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~---------------~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dgtvr 238 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTL---------------HCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTIN 238 (524)
T ss_dssp --------CEEEEEEEEETTTC---------------CEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEE
T ss_pred hhhccCCCCceEEEEEccCCCC---------------CceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEE
Confidence 4678899999999997643210 11223456778899999999996 57999999999999
Q ss_pred EEECCCCeE-----------EEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEE--E
Q 005473 581 LWCTESFTV-----------KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSL--D 647 (695)
Q Consensus 581 IWDl~t~~~-----------~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl--~ 647 (695)
|||+.++.+ ..++.+|...|++++|+++ ..|++|+.||+|++||++++..++..+.+|...|++| +
T Consensus 239 lWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~ 317 (524)
T 2j04_B 239 FLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTA 317 (524)
T ss_dssp EEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEE
T ss_pred EEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEE
Confidence 999976532 3478899999999999986 5899999999999999998766667889999999999 5
Q ss_pred EecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCC--cEEEEEEeCCC
Q 005473 648 FHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFE--SFVSVRVVQPR 695 (695)
Q Consensus 648 fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~--~VtsVaf~sPd 695 (695)
|+|++..+|++|+.|++|+|||+++++++.++.+|.. .|.+|+| +|+
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~f-sp~ 366 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVY-CPQ 366 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEE-ETT
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEe-CCC
Confidence 6777645889999999999999999998888888764 5889999 985
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.85 E-value=4.7e-20 Score=216.67 Aligned_cols=182 Identities=21% Similarity=0.349 Sum_probs=157.1
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|++++ .++++|+.|+.|++|+...+ ..+..+.+|.+.
T Consensus 54 ~~~~v~~~~~s~~~---------------~~l~~~~~dg~i~vw~~~~~-------------------~~~~~~~~~~~~ 99 (814)
T 3mkq_A 54 TETPVRAGKFIARK---------------NWIIVGSDDFRIRVFNYNTG-------------------EKVVDFEAHPDY 99 (814)
T ss_dssp CSSCEEEEEEEGGG---------------TEEEEEETTSEEEEEETTTC-------------------CEEEEEECCSSC
T ss_pred CCCcEEEEEEeCCC---------------CEEEEEeCCCeEEEEECCCC-------------------cEEEEEecCCCC
Confidence 34456666666655 78999999999999976433 355677889999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eEEEEecccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 558 VESCHFSPDGKLLATGGHDKKAVLWCTESF-TVKSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~-~~~~~l~~H~~~V~~v~~sp-dg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
|++++|+|++++|++|+.||.|+|||++++ .+...+.+|...|.+++|+| ++..|++++.||+|++||++++......
T Consensus 100 v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred EEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE
Confidence 999999999999999999999999999886 77788899999999999999 7889999999999999999887653344
Q ss_pred EecCCCCeEEEEEec--CCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTGHSTTVMSLDFHP--SKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~~V~sl~fsp--dg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
...|...|.+++|+| ++. ++++|+.||.|++||+++++++..+.+|...|++++| +|+
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~ 239 (814)
T 3mkq_A 180 TTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF-HPT 239 (814)
T ss_dssp ECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE-CSS
T ss_pred ecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE-cCC
Confidence 444558899999999 777 6779999999999999999999999999999999999 985
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.85 E-value=2.6e-20 Score=195.45 Aligned_cols=171 Identities=12% Similarity=0.193 Sum_probs=140.7
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCC----CCCeEEEE----EcCCCCEEEEEeCC
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAS----TSKVESCH----FSPDGKLLATGGHD 576 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H----~~~V~~v~----fspdg~~LaSgs~D 576 (695)
...++++++.|+.|++|+..... ..+..+..| ...|.+++ |++++++|++|+.|
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 189 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKD------------------DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN 189 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCS------------------SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT
T ss_pred CccEEEEEeCCCeEEEEeCCCCC------------------CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC
Confidence 34789999999999999765432 012233333 33788988 78899999999999
Q ss_pred CcEEEEECCCCeEEEEecccCCCeEEEEEcC---CCCEEEEEeCCCeEEEEECCCCCe----eEEEEecCCCCeEEEEEe
Q 005473 577 KKAVLWCTESFTVKSTLEEHTQWITDVRFSP---SLSRLATSSADRTVRVWDTENPDY----SLRTFTGHSTTVMSLDFH 649 (695)
Q Consensus 577 g~V~IWDl~t~~~~~~l~~H~~~V~~v~~sp---dg~~LaTgs~DgtIrvWDl~t~~~----~l~~~~gh~~~V~sl~fs 649 (695)
+.|++||+++++... ...|...|.+++|+| ++.+|++++.||.|++||++++.. ....+.+|...|++++|+
T Consensus 190 ~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 268 (357)
T 3i2n_A 190 GDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL 268 (357)
T ss_dssp SEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE
T ss_pred CeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC
Confidence 999999999988754 466899999999999 899999999999999999986442 122344899999999999
Q ss_pred cCCCeEEEEEeCCCcEEEEECCCC-------------------eEEEEEecCCCcEEEEEEeCCC
Q 005473 650 PSKEDLLCSCDNNSEIRYWSINNG-------------------SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 650 pdg~~llaSgs~Dg~IriWDl~tg-------------------~~v~~~~~h~~~VtsVaf~sPd 695 (695)
|++..+|++|+.||.|++||++++ +++..+.+|..+|++++| +|+
T Consensus 269 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~ 332 (357)
T 3i2n_A 269 PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDW-SPD 332 (357)
T ss_dssp TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEE-CSS
T ss_pred CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEE-cCC
Confidence 998878889999999999999754 578889999999999999 985
No 93
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.85 E-value=1.5e-19 Score=192.84 Aligned_cols=182 Identities=24% Similarity=0.308 Sum_probs=151.1
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+..+.|.+++. .++++++.|+.|++|+.... ..+..+ .+...
T Consensus 98 ~~~~v~~~~~~~~~~--------------~~l~s~~~d~~i~iwd~~~~-------------------~~~~~~-~~~~~ 143 (408)
T 4a11_B 98 HRYSVETVQWYPHDT--------------GMFTSSSFDKTLKVWDTNTL-------------------QTADVF-NFEET 143 (408)
T ss_dssp CSSCEEEEEECTTCT--------------TCEEEEETTSEEEEEETTTT-------------------EEEEEE-ECSSC
T ss_pred CCCcEEEEEEccCCC--------------cEEEEEeCCCeEEEeeCCCC-------------------ccceec-cCCCc
Confidence 345667777776443 67899999999999976432 122233 36777
Q ss_pred eEEEEEcCC---CCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCeeE
Q 005473 558 VESCHFSPD---GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 558 V~~v~fspd---g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~-~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
+.++.|++. +.+|++|+.|+.|+|||+++++++..+.+|...|.+++|+|++. +|++|+.||.|++||+++...++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~ 223 (408)
T 4a11_B 144 VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCL 223 (408)
T ss_dssp EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCS
T ss_pred eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccc
Confidence 999999984 45999999999999999999999999999999999999999988 68999999999999999877556
Q ss_pred EEE---------------ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC-------------------------
Q 005473 634 RTF---------------TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG------------------------- 673 (695)
Q Consensus 634 ~~~---------------~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg------------------------- 673 (695)
..+ .+|...|.+++|+|++. +|++|+.||.|++||++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (408)
T 4a11_B 224 ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCG 302 (408)
T ss_dssp EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCS
T ss_pred ccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecC
Confidence 665 57889999999999987 5668899999999998653
Q ss_pred ----------------------eEEEEEecCCCcEEEEEEeCCC
Q 005473 674 ----------------------SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 674 ----------------------~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+++..+.+|.+.|++++| +|+
T Consensus 303 ~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~-s~~ 345 (408)
T 4a11_B 303 CSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF-QSN 345 (408)
T ss_dssp SSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE-ETT
T ss_pred CCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE-cCC
Confidence 567778899999999999 885
No 94
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=6.1e-20 Score=221.46 Aligned_cols=181 Identities=12% Similarity=0.091 Sum_probs=153.2
Q ss_pred cCCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 476 HNGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 476 ~s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
+.+...+.++.|+|++ .++++|+.|++|++|+.... .... ...|.
T Consensus 14 ~gh~~~V~~lafspdg---------------~~lAsgs~Dg~I~lw~~~~~-------------------~~~~-~~~~~ 58 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQ---------------NLLAIATVTGEVHIYGQQQV-------------------EVVI-KLEDR 58 (902)
T ss_dssp EECSSCEEEEEEETTT---------------TEEEEEETTSEEEEECSTTC-------------------EEEE-ECSSC
T ss_pred cCCCCCcEEEEECCCC---------------CEEEEEeCCCEEEEEeCCCc-------------------EEEE-EcCCC
Confidence 3455678888998877 78999999999999954211 1122 23478
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeE--
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSL-- 633 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l-- 633 (695)
..|.+|+|+| |++|++++.|++|+|||+++++++..+. |.+.|++++|+|++.+|++|+.||+|++||++++....
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp CCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccce
Confidence 8999999999 8899999999999999999999988886 77899999999999999999999999999999765311
Q ss_pred --------EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC------------------CCcEE
Q 005473 634 --------RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF------------------FESFV 687 (695)
Q Consensus 634 --------~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h------------------~~~Vt 687 (695)
..+.+|.+.|++++|+|++..++++|+.||.| +||+++++++..+.+| ...|+
T Consensus 137 i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~ 215 (902)
T 2oaj_A 137 LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVI 215 (902)
T ss_dssp ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEE
T ss_pred eccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeE
Confidence 22367999999999999866688899999999 9999999999998866 57899
Q ss_pred EEEEeCCC
Q 005473 688 SVRVVQPR 695 (695)
Q Consensus 688 sVaf~sPd 695 (695)
+|+| +|+
T Consensus 216 ~v~f-spd 222 (902)
T 2oaj_A 216 QSLY-HPN 222 (902)
T ss_dssp EEEE-CTT
T ss_pred EEEE-cCC
Confidence 9999 986
No 95
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.85 E-value=1.1e-20 Score=207.62 Aligned_cols=158 Identities=22% Similarity=0.226 Sum_probs=130.3
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
.++++|+.|++|++|+.... ....+.....+...|.+++|++++++|++|+.||.|+|||+++
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGN-----------------ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp TEEEEECSSSCEEEEETTSC-----------------EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred CEEEEEeCCCEEEEeeccCC-----------------ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 78999999999999965321 1122222334555688999999999999999999999999964
Q ss_pred CeEEEEecccCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCe--eEEEEecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTENPDY--SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg~-~LaTgs~DgtIrvWDl~t~~~--~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
+.+..+.+|...|++|+|+|++. +|++|+.|++|+|||+++... .+....+|...|++++|+|+|. +|++|+.||
T Consensus 241 -~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~ 318 (435)
T 4e54_B 241 -KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKS 318 (435)
T ss_dssp -CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSS
T ss_pred -ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEcCCC
Confidence 56678899999999999999865 788999999999999987553 2234467999999999999998 666999999
Q ss_pred cEEEEECCCCeEEEEEecCC
Q 005473 664 EIRYWSINNGSCAGVFKNFF 683 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~~h~ 683 (695)
.|+|||++++.++..+..|.
T Consensus 319 ~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 319 EIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp CEEEEESSSSSSEEEECCCC
T ss_pred EEEEEECCCCccceEEeccc
Confidence 99999999999888877664
No 96
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.85 E-value=2.5e-20 Score=202.74 Aligned_cols=172 Identities=16% Similarity=0.148 Sum_probs=135.3
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
.+...+..+.|++++ .++++| .|+.|++|+..... ......+. ....+.+|..
T Consensus 175 ~h~~~v~~~~~~~~~---------------~~l~s~-~d~~i~iwd~~~~~----~~~~~~~~-------~~~~~~~~~~ 227 (447)
T 3dw8_B 175 AHTYHINSISINSDY---------------ETYLSA-DDLRINLWHLEITD----RSFNIVDI-------KPANMEELTE 227 (447)
T ss_dssp CCSSCCCEEEECTTS---------------SEEEEE-CSSEEEEEETTEEE----EEEEEEEC-------CCSSGGGCCC
T ss_pred CCCcceEEEEEcCCC---------------CEEEEe-CCCeEEEEECCCCC----ceeeeeec-------ccccccccCc
Confidence 456677888888866 677888 79999999764210 00000000 0013668999
Q ss_pred CeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeE----EEEecccCC------------CeEEEEEcCCCCEEEEEeCCC
Q 005473 557 KVESCHFSPDG-KLLATGGHDKKAVLWCTESFTV----KSTLEEHTQ------------WITDVRFSPSLSRLATSSADR 619 (695)
Q Consensus 557 ~V~~v~fspdg-~~LaSgs~Dg~V~IWDl~t~~~----~~~l~~H~~------------~V~~v~~spdg~~LaTgs~Dg 619 (695)
.|++++|+|++ ++|++|+.||+|+|||+++++. +..+.+|.. .|.+++|+|++.+|++++. +
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~ 306 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L 306 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C
Confidence 99999999998 9999999999999999999887 788888876 9999999999999999998 9
Q ss_pred eEEEEECCCCCeeEEEEecCCCC---------------eEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEE
Q 005473 620 TVRVWDTENPDYSLRTFTGHSTT---------------VMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAG 677 (695)
Q Consensus 620 tIrvWDl~t~~~~l~~~~gh~~~---------------V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~ 677 (695)
+|+|||+++...++..+.+|... +..++|+|++. +|++|+.||.|+|||+.+++++.
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEE
T ss_pred eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCccee
Confidence 99999999745567888888532 33499999998 55799999999999999988763
No 97
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.85 E-value=3.1e-20 Score=200.30 Aligned_cols=146 Identities=11% Similarity=0.071 Sum_probs=119.2
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCC----cEEEE
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDK----KAVLW 582 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg----~V~IW 582 (695)
.++++++.|+ +++|+...+. ........+|...|.+|+|+|+++++++++.|+ .+++|
T Consensus 189 ~~l~s~s~~~-~~~~~~~~~~-----------------~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 189 KVVAYITGSS-LEVISTVTGS-----------------CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp SEEEEECSSC-EEEEETTTCC-----------------EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred ceEEecccee-EEEEEeccCc-----------------ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 7888887554 5555332221 112234567888999999999999999999887 68889
Q ss_pred ECCCCeE----EEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE-EecCCCCeEEEEEecCCCeEEE
Q 005473 583 CTESFTV----KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT-FTGHSTTVMSLDFHPSKEDLLC 657 (695)
Q Consensus 583 Dl~t~~~----~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~-~~gh~~~V~sl~fspdg~~lla 657 (695)
|+..... ...+.+|...|++++|+|++++||+|+.|++|+|||+++++. +.. +.+|...|++|+|+|||. +|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~-~~~~~~gH~~~V~~v~fSpdg~-~la 328 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM-SKIFKQAHSFAITEVTISPDST-YVA 328 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE-EEEETTSSSSCEEEEEECTTSC-EEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE-EEEecCcccCCEEEEEECCCCC-EEE
Confidence 9876653 346788999999999999999999999999999999998764 665 579999999999999998 677
Q ss_pred EEeCCCcEEEEECCC
Q 005473 658 SCDNNSEIRYWSINN 672 (695)
Q Consensus 658 Sgs~Dg~IriWDl~t 672 (695)
+|+.|++|||||+..
T Consensus 329 S~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 329 SVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSEEEEEECCT
T ss_pred EEeCCCeEEEEEcCC
Confidence 999999999999964
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.7e-20 Score=210.73 Aligned_cols=184 Identities=10% Similarity=0.100 Sum_probs=141.9
Q ss_pred CCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCC----------------CCCCccccccccCCCc
Q 005473 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDA----------------DPRDRVGRSAEVGKGF 543 (695)
Q Consensus 480 ~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~----------------~~~~~~~~~~d~~~~~ 543 (695)
.-+..+.|+||| .++++++.|++|+ +..... ++.+....+|+....
T Consensus 16 ~~v~sv~~SpDG---------------~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~- 77 (588)
T 2j04_A 16 DWKNNLTWARDG---------------TLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQN- 77 (588)
T ss_dssp SSSCCEEECTTS---------------CEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSS-
T ss_pred ccEEEEEECCCC---------------CEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCc-
Confidence 456678888888 7889999999996 221111 112222222221111
Q ss_pred eeeeEEEec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCC-----CeEEEEEcCCCCEEEEEeC
Q 005473 544 TFTEFQLIP-ASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQ-----WITDVRFSPSLSRLATSSA 617 (695)
Q Consensus 544 ~~~~v~~l~-~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~-----~V~~v~~spdg~~LaTgs~ 617 (695)
..+. .|...|.+|+|||+|++||+++.||.|+|||..+ ++..+. |.. .|.+++|+|+|++|++|+.
T Consensus 78 -----~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 78 -----GLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp -----CSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET
T ss_pred -----eEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC
Confidence 1122 5578899999999999999999999999999654 666777 765 4999999999999999999
Q ss_pred CCeEEEEECCCCCe------eEEEE----ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeE---EEEEe-cCC
Q 005473 618 DRTVRVWDTENPDY------SLRTF----TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSC---AGVFK-NFF 683 (695)
Q Consensus 618 DgtIrvWDl~t~~~------~l~~~----~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~---v~~~~-~h~ 683 (695)
||+|+|||+.++.. .+.++ .+|..+|.+++|+|+| +++++.|++|++||+.++.+ +.+++ +|.
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 99999999998652 36776 6788899999999998 55778899999999988773 46674 888
Q ss_pred CcEEEEEEeC
Q 005473 684 ESFVSVRVVQ 693 (695)
Q Consensus 684 ~~VtsVaf~s 693 (695)
..|.+|+| +
T Consensus 227 ~~V~svaF-s 235 (588)
T 2j04_A 227 RKITDLKI-V 235 (588)
T ss_dssp SCCCCEEE-E
T ss_pred CcEEEEEE-E
Confidence 99999999 5
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.84 E-value=3.4e-19 Score=194.65 Aligned_cols=167 Identities=17% Similarity=0.288 Sum_probs=145.9
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
++|++| .|++|++|+...+. ...+..+.+|...|+||+|+|+|++|++|+.||+|+|||+++
T Consensus 117 n~lAvg-ld~tV~lWd~~tg~-----------------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 117 NVLAVA-LDNSVYLWSASSGD-----------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp SEEEEE-ETTEEEEEETTTCC-----------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CEEEEE-eCCEEEEEECCCCC-----------------EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC
Confidence 456666 59999999765431 123344567889999999999999999999999999999999
Q ss_pred CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEE
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIR 666 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~Ir 666 (695)
++++..+.+|...|.++.|+ +.+|++|+.|+.+++||.+.....+..+.+|...++.+.|+|++. ++++++.|+.|+
T Consensus 179 ~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~ 255 (420)
T 4gga_A 179 QKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVN 255 (420)
T ss_dssp TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEE
T ss_pred CcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC-eeeeeeccccce
Confidence 99999999999999999886 579999999999999999988777899999999999999999988 677999999999
Q ss_pred EEECCCCe----EEEEEecCCCcEEEEEEeCCC
Q 005473 667 YWSINNGS----CAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 667 iWDl~tg~----~v~~~~~h~~~VtsVaf~sPd 695 (695)
+||+.+++ .+..+..|...|.+++| +|+
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~p~ 287 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQGAVKAVAW-CPW 287 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSSCEEEEEE-CTT
T ss_pred EEeeccccccceeeeeecccCCceeeeee-CCC
Confidence 99998765 46778899999999999 874
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.84 E-value=9.9e-20 Score=205.71 Aligned_cols=181 Identities=15% Similarity=0.204 Sum_probs=156.7
Q ss_pred CCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC-e
Q 005473 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK-V 558 (695)
Q Consensus 480 ~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~-V 558 (695)
..+..+.|++++ +++++++ |+.|++|+...+. .....+..+.+|.+. |
T Consensus 19 ~~v~~~~~spdg---------------~~l~~~~-~~~v~v~~~~~~~---------------~~~~~~~~~~~h~~~~v 67 (615)
T 1pgu_A 19 NFTTHLSYDPTT---------------NAIAYPC-GKSAFVRCLDDGD---------------SKVPPVVQFTGHGSSVV 67 (615)
T ss_dssp TCCCCCEEETTT---------------TEEEEEE-TTEEEEEECCSSC---------------CSSCSEEEECTTTTSCE
T ss_pred CceeEEEECCCC---------------CEEEEec-CCeEEEEECCCCC---------------CccccceEEecCCCceE
Confidence 356677888877 6777777 8899999764321 011345678899999 9
Q ss_pred EEEEEcC--CCCEEEEEeCCCcEEEEECCCC--------eEEEEecccCCCeEEEEEcCCCCEEEEEeCC----CeEEEE
Q 005473 559 ESCHFSP--DGKLLATGGHDKKAVLWCTESF--------TVKSTLEEHTQWITDVRFSPSLSRLATSSAD----RTVRVW 624 (695)
Q Consensus 559 ~~v~fsp--dg~~LaSgs~Dg~V~IWDl~t~--------~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D----gtIrvW 624 (695)
++++|+| ++++|++|+.||.|+|||+.++ +.+..+..|...|.+++|+|++.+|++++.| +.|++|
T Consensus 68 ~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~ 147 (615)
T 1pgu_A 68 TTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISW 147 (615)
T ss_dssp EEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEET
T ss_pred EEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEE
Confidence 9999999 9999999999999999999754 6777888999999999999999999999988 689999
Q ss_pred ECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCC---cEEEEEEeCCC
Q 005473 625 DTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFE---SFVSVRVVQPR 695 (695)
Q Consensus 625 Dl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~---~VtsVaf~sPd 695 (695)
|.. . ++..+.+|...|++++|+|+++.++++|+.|+.|++||+.+++++..+.+|.. .|++++| +|+
T Consensus 148 d~~--~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~ 217 (615)
T 1pgu_A 148 DSG--N-SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF-SPD 217 (615)
T ss_dssp TTC--C-EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE-CST
T ss_pred ECC--C-cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE-CCC
Confidence 833 3 57889999999999999999987888999999999999999999999999999 9999999 985
No 101
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=2.9e-19 Score=184.62 Aligned_cols=189 Identities=17% Similarity=0.295 Sum_probs=147.6
Q ss_pred cCCCCcEEEEeeCCCcEEEEeCCCCCCCCCc------------------------cccccccCCCceeeeEEEecCCCCC
Q 005473 502 LTDMDRFVDDGSLDDNVESFLSPDDADPRDR------------------------VGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 502 l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~------------------------~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+....+++++|+.|++|++|+...+...... ....+.... ....+..+.+|...
T Consensus 75 ~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 152 (318)
T 4ggc_A 75 WIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRV--AEHHVATLSGHSQE 152 (318)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTS--SSCEEEEEECCSSC
T ss_pred ECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCC--CceeEEEEcCccCc
Confidence 3445589999999999999988655311100 011111111 22455677899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCe----EEEEecccCCCeEEEEEcCCCC-EE--EEEeCCCeEEEEECCCCC
Q 005473 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFT----VKSTLEEHTQWITDVRFSPSLS-RL--ATSSADRTVRVWDTENPD 630 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~----~~~~l~~H~~~V~~v~~spdg~-~L--aTgs~DgtIrvWDl~t~~ 630 (695)
+.++.|++++++|++++.|++|+|||+++++ .......|.+.|.++.++|++. .+ ++++.+++|++||.+...
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC
T ss_pred eEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc
Confidence 9999999999999999999999999998765 3455677889999999999754 33 456778999999999865
Q ss_pred eeEEEEecCCCCeEEEEEecCCCeEEEE-EeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 631 YSLRTFTGHSTTVMSLDFHPSKEDLLCS-CDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 631 ~~l~~~~gh~~~V~sl~fspdg~~llaS-gs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
. .....+...|..+.|+|++..++++ |+.|+.|+|||+++++++.++.+|.+.|++|+| +|+
T Consensus 233 ~--~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~-spd 295 (318)
T 4ggc_A 233 C--LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM-SPD 295 (318)
T ss_dssp E--EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE-CTT
T ss_pred c--cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE-cCC
Confidence 4 3344567789999999999877654 347999999999999999999999999999999 986
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2e-19 Score=198.37 Aligned_cols=174 Identities=13% Similarity=0.082 Sum_probs=144.0
Q ss_pred CCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC---CCEEEEEeCCCcE
Q 005473 503 TDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD---GKLLATGGHDKKA 579 (695)
Q Consensus 503 ~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd---g~~LaSgs~Dg~V 579 (695)
.+...++++|+.|+.|.+|+........ ..+..+.+|...|++|+|+|+ +++|++|+.|++|
T Consensus 158 sp~~~~l~~~~~~g~v~~~~~~~~~~~~---------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 158 AEDDTTVIIADKFGDVYSIDINSIPEEK---------------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCCCSS---------------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred cCCCCEEEEEeCCCcEEEEecCCccccc---------------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 3445789999999999999765432110 022345689999999999999 9999999999999
Q ss_pred EEEECCCCeEEEE-ecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEec--------------------
Q 005473 580 VLWCTESFTVKST-LEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTG-------------------- 638 (695)
Q Consensus 580 ~IWDl~t~~~~~~-l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~g-------------------- 638 (695)
+|||+++++++.. +.+|...|.+++|+ ++.+|++++.|++|+|||+++++. +..+..
T Consensus 223 ~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (450)
T 2vdu_B 223 KISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN-LSTFDYNSLIKPYLNDQHLAPPRFQN 300 (450)
T ss_dssp EEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE-EEEEECHHHHGGGCCTTSBC------
T ss_pred EEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE-eeeecchhhhhhhhhhcccccccccc
Confidence 9999999988877 56899999999999 999999999999999999998764 565542
Q ss_pred -----CCCCeEEEEEecCCCeEEEEEeCCCcEEEEEC--CCC---eEEEEEecCCCcEEEEEEeCCC
Q 005473 639 -----HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSI--NNG---SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 639 -----h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl--~tg---~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+...|.+++|+|++..+++++..|+.|+|||+ .++ +++..+.+| +.|.+++| +|+
T Consensus 301 ~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~-~~~ 365 (450)
T 2vdu_B 301 ENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSA-HND 365 (450)
T ss_dssp ----CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEE-ETT
T ss_pred cccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEe-cCC
Confidence 23579999999999866655548999999999 666 788888888 89999999 874
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=1.3e-19 Score=198.72 Aligned_cols=181 Identities=20% Similarity=0.345 Sum_probs=151.2
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCC------------------------CCCccccccccCCCceeeeEEEecCCCCCeEE
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDAD------------------------PRDRVGRSAEVGKGFTFTEFQLIPASTSKVES 560 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~------------------------~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~ 560 (695)
.+.++++|+.|++|++|+...+.. +.+...++|+...+........+.+|...|.+
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 261 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 261 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEE
Confidence 346788888888888887654321 11233355655555444555778899999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCC
Q 005473 561 CHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHS 640 (695)
Q Consensus 561 v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~ 640 (695)
++| ++++|++|+.||.|+|||+++++++..+.+|...|.++.|+ +.+|++|+.||+|++||++++. ++..+.+|.
T Consensus 262 ~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~ 336 (435)
T 1p22_A 262 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHE 336 (435)
T ss_dssp EEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC-EEEEECCCS
T ss_pred EEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCC-EEEEEeCCc
Confidence 999 78899999999999999999999999999999999999995 6799999999999999999876 588999999
Q ss_pred CCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCe---------EEEEEecCCCcEEEEEEeCC
Q 005473 641 TTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGS---------CAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 641 ~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~---------~v~~~~~h~~~VtsVaf~sP 694 (695)
..|.+++| ++. +|++|+.||.|++||++++. ++..+.+|.+.|++++| ++
T Consensus 337 ~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~ 395 (435)
T 1p22_A 337 ELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DE 395 (435)
T ss_dssp SCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-CS
T ss_pred CcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe-CC
Confidence 99999999 444 67799999999999998766 89999999999999998 54
No 104
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=4.6e-20 Score=222.48 Aligned_cols=172 Identities=13% Similarity=0.130 Sum_probs=140.7
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEe-----cCCCCCeEEEEEcCCCCEEEEEeCCCcE
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLI-----PASTSKVESCHFSPDGKLLATGGHDKKA 579 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l-----~~H~~~V~~v~fspdg~~LaSgs~Dg~V 579 (695)
..+++++|+.|++|++|+...+... .. ..+ . ..+ .+|...|.+|+|+||+++||+|+.||+|
T Consensus 446 dg~~laSgs~DgtVrlWd~~~g~~~---~~------~~~--~--~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV 512 (902)
T 2oaj_A 446 YGTAFITGHSNGSVRIYDASHGDIQ---DN------ASF--E--VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDV 512 (902)
T ss_dssp EEEEEEEEETTSEEEEEESSCCTTT---TT------BCE--E--EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCcEEEEecCCCcEEEEECCCcccc---CC------ceE--E--eechhhcCCCCCCceeEEEecCCCCeEEEEecCcEE
Confidence 3579999999999999988655210 00 000 0 011 2899999999999999999999999999
Q ss_pred EEEECCCC---------------------------------------------eEEEEecccCCCeEEEEEcCCCCEEEE
Q 005473 580 VLWCTESF---------------------------------------------TVKSTLEEHTQWITDVRFSPSLSRLAT 614 (695)
Q Consensus 580 ~IWDl~t~---------------------------------------------~~~~~l~~H~~~V~~v~~spdg~~LaT 614 (695)
+|||+.++ +++.++.+|.+.|++|+|+|+| +||+
T Consensus 513 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAs 591 (902)
T 2oaj_A 513 VLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGI 591 (902)
T ss_dssp EEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEE
T ss_pred EEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEE
Confidence 99999765 3467888999999999999999 9999
Q ss_pred EeCCCeEEEEECCCCCeeEE-----EEe-cCCCCeEEEEEe-----cCC--CeEEEEEeCCCcEEEEEC---CCCeEEEE
Q 005473 615 SSADRTVRVWDTENPDYSLR-----TFT-GHSTTVMSLDFH-----PSK--EDLLCSCDNNSEIRYWSI---NNGSCAGV 678 (695)
Q Consensus 615 gs~DgtIrvWDl~t~~~~l~-----~~~-gh~~~V~sl~fs-----pdg--~~llaSgs~Dg~IriWDl---~tg~~v~~ 678 (695)
|+.|++|+|||++++.. +. .+. +|.+.|++|+|+ ||| ..+|++|+.|++|++||+ .+|+++..
T Consensus 592 gs~D~tv~lwd~~~~~~-~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~ 670 (902)
T 2oaj_A 592 AYAAGSLMLIDRRGPAI-IYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQ 670 (902)
T ss_dssp EETTSEEEEEETTTTEE-EEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEE
T ss_pred EeCCCcEEEEECCCCeE-EEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEE
Confidence 99999999999987553 32 233 899999999999 987 357889999999999999 78999999
Q ss_pred EecCC-----CcEEEEE-E
Q 005473 679 FKNFF-----ESFVSVR-V 691 (695)
Q Consensus 679 ~~~h~-----~~VtsVa-f 691 (695)
+.+|. ++|.+|+ |
T Consensus 671 ~~~~~~~~~~~~v~~i~~~ 689 (902)
T 2oaj_A 671 LMDITNVTSKGPIHKIDAF 689 (902)
T ss_dssp EEEEEECCSSCCCCEEEEE
T ss_pred ecCceecCCCCceEEEEeE
Confidence 88774 7888777 5
No 105
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.83 E-value=6.6e-19 Score=193.53 Aligned_cols=142 Identities=18% Similarity=0.272 Sum_probs=126.3
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q 005473 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWD 625 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWD 625 (695)
..+..+.+|...|.+++|+|++++|++|+.|+.|+|||+++++++..+.+|...|.+++|+ +.+|++++.||+|++||
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWD 378 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEE
Confidence 5667788999999999999999999999999999999999999999999999999999997 57999999999999999
Q ss_pred CCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEE-EecCCCcEEEEEEeCC
Q 005473 626 TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGV-FKNFFESFVSVRVVQP 694 (695)
Q Consensus 626 l~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~-~~~h~~~VtsVaf~sP 694 (695)
+++... ...+ .|...+..++|++++. ++++|+ ||.|++||+++++++.. +.+|.+.|++|+| ++
T Consensus 379 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~-~~ 443 (464)
T 3v7d_B 379 ANDYSR-KFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNF-KG 443 (464)
T ss_dssp TTTCCE-EEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEE-ET
T ss_pred CCCCce-eeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEe-cC
Confidence 998664 3333 3667788899999987 666777 89999999999999986 6689999999999 64
No 106
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.83 E-value=1.6e-19 Score=193.14 Aligned_cols=145 Identities=10% Similarity=0.071 Sum_probs=117.5
Q ss_pred eeEEEecCCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCeEEEEecccC---CCeEEEEEcCCCCEE-------
Q 005473 546 TEFQLIPASTSKVESCHFSP---DGKLLATGGHDKKAVLWCTESFTVKSTLEEHT---QWITDVRFSPSLSRL------- 612 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fsp---dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~---~~V~~v~~spdg~~L------- 612 (695)
+.+..+.+|...|+.++|++ ++.+|++|+.|++|+|||++++++++++.+|. ..|.+++|+|++.++
T Consensus 169 ~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~ 248 (356)
T 2w18_A 169 GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPC 248 (356)
T ss_dssp CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---
T ss_pred ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCC
Confidence 34566778999999999999 78999999999999999999999999998754 467888999999876
Q ss_pred -----EEEeCCCeEEEEECCCCCeeEEEE-----ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 613 -----ATSSADRTVRVWDTENPDYSLRTF-----TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 613 -----aTgs~DgtIrvWDl~t~~~~l~~~-----~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
++|+.|++|++||..+++. +.++ .+|...+.+.+++ +. ++++|+.|++|+|||+.+++++.++++|
T Consensus 249 ~~w~laSGs~D~tIklWd~~tgk~-l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~tGk~l~tL~gH 324 (356)
T 2w18_A 249 AKESESLRSPVFQLIVINPKTTLS-VGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLLLGQCTALLPPV 324 (356)
T ss_dssp ---------CCEEEEEEETTTTEE-EEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred CcceeeccCCCcEEEEEECCCCEE-EEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECCCCcEEEEecCC
Confidence 5688999999999998654 5554 4777666555555 44 7889999999999999999999999999
Q ss_pred CCcEE-EEEEeCCC
Q 005473 683 FESFV-SVRVVQPR 695 (695)
Q Consensus 683 ~~~Vt-sVaf~sPd 695 (695)
.+.|. +++| +||
T Consensus 325 ~~~vvs~vaf-SPD 337 (356)
T 2w18_A 325 SDQHWSFVKW-SGT 337 (356)
T ss_dssp --CCCCEEEE-CSS
T ss_pred CCCeEEEEEE-CCC
Confidence 87665 5899 996
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.83 E-value=5e-20 Score=195.54 Aligned_cols=164 Identities=11% Similarity=0.025 Sum_probs=133.9
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT 584 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl 584 (695)
...++++|+.|++|++|+...+. .+..+. ...|.++.|+|+ +++|+.|++|++|+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~-------------------~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~ 102 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSK-------------------TITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYP 102 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSS-------------------CEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEET
T ss_pred CCCEEEEECCCCcEEEEECCCCc-------------------EEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEc
Confidence 34789999999999999765432 111121 345778888888 999999999999976
Q ss_pred C---------CCeEEEEe-cccCCCeEEEEEcC--CCCEEEEEeCCCeEEEEECCCCCeeEEEE-ecCCCCeEEEEEecC
Q 005473 585 E---------SFTVKSTL-EEHTQWITDVRFSP--SLSRLATSSADRTVRVWDTENPDYSLRTF-TGHSTTVMSLDFHPS 651 (695)
Q Consensus 585 ~---------t~~~~~~l-~~H~~~V~~v~~sp--dg~~LaTgs~DgtIrvWDl~t~~~~l~~~-~gh~~~V~sl~fspd 651 (695)
. +++.+..+ .+|.+.|.+++|+| ++.+|++++.||+|++||+++++. +..+ ..|...|++++|+|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~pd 181 (343)
T 3lrv_A 103 GNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHKD 181 (343)
T ss_dssp TTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE-EEEECCCSSCCCCEEEECTT
T ss_pred cCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE-EEEEecCCCCceEEEEECCC
Confidence 5 45544444 36778999999999 999999999999999999998765 5555 345668999999999
Q ss_pred CCeEEEEEeCCCcEEEEECCCCeEE-EEEec-CCCcEEEEEEeCCC
Q 005473 652 KEDLLCSCDNNSEIRYWSINNGSCA-GVFKN-FFESFVSVRVVQPR 695 (695)
Q Consensus 652 g~~llaSgs~Dg~IriWDl~tg~~v-~~~~~-h~~~VtsVaf~sPd 695 (695)
+. +|++|+.||.|++||+++++++ ..+.+ |.++|++|+| +|+
T Consensus 182 g~-~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~f-s~~ 225 (343)
T 3lrv_A 182 SL-LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKF-ADN 225 (343)
T ss_dssp SC-EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEE-CTT
T ss_pred CC-EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEE-eCC
Confidence 87 7789999999999999999988 88888 9999999999 986
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=8.6e-19 Score=192.19 Aligned_cols=161 Identities=19% Similarity=0.378 Sum_probs=142.9
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
.++++|+.|+.|++|+...+ ..+..+.+|.+.|.+++| ++++|++|+.||+|+|||+.+
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~-------------------~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTL-------------------ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SEEEEEESSSCEEEEESSSC-------------------CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred CEEEEEeCCCeEEEEeCCCC-------------------eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 78999999999999965332 345678899999999999 788999999999999999999
Q ss_pred CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee--EEEEecCCCCeEEEEEecCCCeEEEEEeCCCc
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS--LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSE 664 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~--l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~ 664 (695)
++++..+.+|...|.+++|++ .+|++|+.||+|++||++++... ...+.+|...|.+++| ++. ++++|+.||.
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~~dg~ 277 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK-YIVSASGDRT 277 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT-EEEEEETTSE
T ss_pred CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC-EEEEEeCCCe
Confidence 999999999999999999974 59999999999999999886642 2678899999999999 444 6779999999
Q ss_pred EEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 665 IRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 665 IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
|++||+++++++..+.+|...|.+++| ++
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~ 306 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQY-RD 306 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEE-ET
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEe-CC
Confidence 999999999999999999999999998 54
No 109
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.83 E-value=4.5e-19 Score=218.85 Aligned_cols=201 Identities=25% Similarity=0.367 Sum_probs=162.5
Q ss_pred cccCCCCCceEEEEecCCCccccc--------cCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCcee
Q 005473 474 LQHNGASSKSLLMFGSDGMGSLTS--------APNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTF 545 (695)
Q Consensus 474 l~~s~s~~~s~l~~~~dg~~~la~--------s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~ 545 (695)
...+++.+..+..|.......+.. ..-.+.+..+++++|+.|++|++|+...+
T Consensus 629 ~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~------------------- 689 (1249)
T 3sfz_A 629 RIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG------------------- 689 (1249)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------------------
T ss_pred EEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-------------------
Confidence 334455666677776544311110 11113344589999999999999976433
Q ss_pred eeEEEecCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 005473 546 TEFQLIPASTSKVESCHFSP--DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRV 623 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fsp--dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrv 623 (695)
..+..+.+|...|.+++|++ ++.++++|+.|+.|+|||+++++++..+.+|.+.|++++|+|++.+|++++.||+|++
T Consensus 690 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~v 769 (1249)
T 3sfz_A 690 KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRL 769 (1249)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEE
T ss_pred ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEE
Confidence 35667789999999999999 5568999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCee-----------------------------------------------------EE-EEecCCCCeEEEEEe
Q 005473 624 WDTENPDYS-----------------------------------------------------LR-TFTGHSTTVMSLDFH 649 (695)
Q Consensus 624 WDl~t~~~~-----------------------------------------------------l~-~~~gh~~~V~sl~fs 649 (695)
||++++... +. ...+|...|.+++|+
T Consensus 770 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s 849 (1249)
T 3sfz_A 770 WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS 849 (1249)
T ss_dssp EEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC
T ss_pred EeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc
Confidence 998764320 01 112788899999999
Q ss_pred cCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 650 PSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 650 pdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
|++. ++++++.||.|++||+.++.++..+.+|.+.|++++| +|+
T Consensus 850 p~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~-spd 893 (1249)
T 3sfz_A 850 PYDH-LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMF-SPD 893 (1249)
T ss_dssp SSTT-EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEE-CTT
T ss_pred CCCC-EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEE-CCC
Confidence 9988 6779999999999999999999999999999999999 985
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.4e-19 Score=213.83 Aligned_cols=172 Identities=17% Similarity=0.288 Sum_probs=146.9
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEE
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPD--GKLLATGGHDKKAVLWC 583 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspd--g~~LaSgs~Dg~V~IWD 583 (695)
..++++|+.|+.|++|+...+ ....+..+.+|...|++++|+|+ +++|++|+.||.|+|||
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~-----------------~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwd 129 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENG-----------------RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 129 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETT-----------------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCC-----------------cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEE
Confidence 478999999999999965322 23466778899999999999999 99999999999999999
Q ss_pred CCCC--eEEEEecccCCCeEEEEEcC-------------CCCEEEEEeCCCeEEEEECCCCC---eeEEEEecCCCCeEE
Q 005473 584 TESF--TVKSTLEEHTQWITDVRFSP-------------SLSRLATSSADRTVRVWDTENPD---YSLRTFTGHSTTVMS 645 (695)
Q Consensus 584 l~t~--~~~~~l~~H~~~V~~v~~sp-------------dg~~LaTgs~DgtIrvWDl~t~~---~~l~~~~gh~~~V~s 645 (695)
+++. .....+.+|...|.+++|+| ++.+|++|+.||+|++||++++. .++..+.+|.+.|++
T Consensus 130 l~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~ 209 (753)
T 3jro_A 130 FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD 209 (753)
T ss_dssp CCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE
T ss_pred eecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEE
Confidence 9877 34556788999999999999 58999999999999999998764 456788899999999
Q ss_pred EEEecCC--CeEEEEEeCCCcEEEEECCCCe-----EEEEEecCCCcEEEEEEeCCC
Q 005473 646 LDFHPSK--EDLLCSCDNNSEIRYWSINNGS-----CAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 646 l~fspdg--~~llaSgs~Dg~IriWDl~tg~-----~v~~~~~h~~~VtsVaf~sPd 695 (695)
++|+|++ ..++++|+.||.|++||++++. .+....+|.+.|++++| +|+
T Consensus 210 l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~-spd 265 (753)
T 3jro_A 210 VAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASW-SLS 265 (753)
T ss_dssp EEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEE-CTT
T ss_pred EEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEE-cCC
Confidence 9999994 4478899999999999999864 33444568999999999 985
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.83 E-value=1.7e-19 Score=188.61 Aligned_cols=179 Identities=13% Similarity=0.067 Sum_probs=149.2
Q ss_pred CCCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 477 NGASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 477 s~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
.+...+..+.|++++ .++++++.|+.|++|+..... .......+.+|..
T Consensus 9 ~h~~~v~~~~~s~~~---------------~~l~~~~~d~~v~iw~~~~~~----------------~~~~~~~~~~~~~ 57 (342)
T 1yfq_A 9 APKDYISDIKIIPSK---------------SLLLITSWDGSLTVYKFDIQA----------------KNVDLLQSLRYKH 57 (342)
T ss_dssp CCSSCEEEEEEEGGG---------------TEEEEEETTSEEEEEEEETTT----------------TEEEEEEEEECSS
T ss_pred CCCCcEEEEEEcCCC---------------CEEEEEcCCCeEEEEEeCCCC----------------ccccceeeeecCC
Confidence 455678899999876 688999999999999764331 1123345568999
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEEC-CCCeEEEEecc--cCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC----
Q 005473 557 KVESCHFSPDGK-LLATGGHDKKAVLWCT-ESFTVKSTLEE--HTQWITDVRFSPSLSRLATSSADRTVRVWDTEN---- 628 (695)
Q Consensus 557 ~V~~v~fspdg~-~LaSgs~Dg~V~IWDl-~t~~~~~~l~~--H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t---- 628 (695)
.|.+++|+|+++ +|++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| +.+|++++.|+.|++||+++
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~ 135 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDG 135 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTB
T ss_pred ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccc
Confidence 999999999999 9999999999999999 87755 67888 999999999999 99999999999999999986
Q ss_pred -----CCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC-Ce--EEEEEecCCCcEEEEEEeCC
Q 005473 629 -----PDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN-GS--CAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 629 -----~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t-g~--~v~~~~~h~~~VtsVaf~sP 694 (695)
.. ++..+. |...|.+++|+|++ +++++.|+.|++||+++ +. .......|...|++|+| +|
T Consensus 136 ~~~~~~~-~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~-~~ 203 (342)
T 1yfq_A 136 VIAVKNL-NSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL-LP 203 (342)
T ss_dssp CEEEEES-CSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE-CS
T ss_pred cccccCC-eeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE-CC
Confidence 44 244555 88999999999885 66889999999999998 54 33455578899999999 88
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.83 E-value=6.1e-19 Score=199.25 Aligned_cols=171 Identities=13% Similarity=0.155 Sum_probs=148.0
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCC----CcEEEE
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHD----KKAVLW 582 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~D----g~V~IW 582 (695)
+++++|+.|+.|++|+...+. .........+..+..|...|.+++|+|++++|++++.| +.|++|
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~ 147 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDK-----------ESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISW 147 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEG-----------GGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEET
T ss_pred CEEEEecCCCEEEEEeCCCCc-----------ccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEE
Confidence 789999999999999663220 00011335567788899999999999999999999988 688888
Q ss_pred ECCCCeEEEEecccCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCeeEEEEecCCC---CeEEEEEecC-CCeEEE
Q 005473 583 CTESFTVKSTLEEHTQWITDVRFSPSLS-RLATSSADRTVRVWDTENPDYSLRTFTGHST---TVMSLDFHPS-KEDLLC 657 (695)
Q Consensus 583 Dl~t~~~~~~l~~H~~~V~~v~~spdg~-~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~---~V~sl~fspd-g~~lla 657 (695)
| .++.+..+.+|...|++++|+|++. +|++++.|+.|++||+.+.+ ++..+.+|.. .|++++|+|+ +. +|+
T Consensus 148 d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~ 223 (615)
T 1pgu_A 148 D--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-FSASDRTHHKQGSFVRDVEFSPDSGE-FVI 223 (615)
T ss_dssp T--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-EEEEECSSSCTTCCEEEEEECSTTCC-EEE
T ss_pred E--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-eeeeecccCCCCceEEEEEECCCCCC-EEE
Confidence 8 5678889999999999999999987 89999999999999998855 5888999999 9999999999 76 677
Q ss_pred EEeCCCcEEEEECCCCeEEEEE-e---cCCCcEEEEEEeC
Q 005473 658 SCDNNSEIRYWSINNGSCAGVF-K---NFFESFVSVRVVQ 693 (695)
Q Consensus 658 Sgs~Dg~IriWDl~tg~~v~~~-~---~h~~~VtsVaf~s 693 (695)
+|+.||.|++||+++++++..+ . +|...|++++| +
T Consensus 224 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 262 (615)
T 1pgu_A 224 TVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSW-L 262 (615)
T ss_dssp EEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEE-S
T ss_pred EEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEE-c
Confidence 9999999999999999999999 6 89999999999 5
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4.1e-19 Score=201.15 Aligned_cols=171 Identities=11% Similarity=0.144 Sum_probs=141.4
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC-
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS- 556 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~- 556 (695)
+...+..+.|+|+| .++++++.|++|++|+.. ..+..+. |..
T Consensus 84 ~~~~V~~vawSPdG---------------~~LAs~s~dg~V~iwd~~---------------------~~l~~l~-~~~~ 126 (588)
T 2j04_A 84 PVCYPRVCKPSPID---------------DWMAVLSNNGNVSVFKDN---------------------KMLTNLD-SKGN 126 (588)
T ss_dssp CSCCEEEEEECSSS---------------SCEEEEETTSCEEEEETT---------------------EEEEECC-CSSC
T ss_pred CCCcEEEEEECCCC---------------CEEEEEeCCCcEEEEeCC---------------------ceeeecc-CCCc
Confidence 35688999999988 678999999999999521 1444455 554
Q ss_pred ----CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-------EEEEe----cccCCCeEEEEEcCCCCEEEEEeCCCeE
Q 005473 557 ----KVESCHFSPDGKLLATGGHDKKAVLWCTESFT-------VKSTL----EEHTQWITDVRFSPSLSRLATSSADRTV 621 (695)
Q Consensus 557 ----~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~-------~~~~l----~~H~~~V~~v~~spdg~~LaTgs~DgtI 621 (695)
.|.+++|||||++||+|+.||+|+|||+.++. .+.++ .+|...|.+++|+|+| +++++.|++|
T Consensus 127 ~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tV 204 (588)
T 2j04_A 127 LSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSV 204 (588)
T ss_dssp STTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCE
T ss_pred cccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeE
Confidence 49999999999999999999999999999875 35676 6788999999999998 8888999999
Q ss_pred EEEECCCCCe--eEEEE-ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEE
Q 005473 622 RVWDTENPDY--SLRTF-TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 622 rvWDl~t~~~--~l~~~-~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf 691 (695)
++||+..... ...++ .+|...|.+|+|+ |. .+++++ +++|++||+.+++......+|.+.|..|+|
T Consensus 205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred EEEECCCCccccceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 9999987663 23566 4788999999999 44 666776 699999999988775444489999999987
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.82 E-value=1.7e-18 Score=178.77 Aligned_cols=167 Identities=17% Similarity=0.288 Sum_probs=142.1
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
++|++| .|++|++|+...+. ......+.+|...|+||+|+|++++|++|+.||+|+|||+++
T Consensus 37 ~~lAvg-~D~tV~iWd~~tg~-----------------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 37 NVLAVA-LDNSVYLWSASSGD-----------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp SEEEEE-ETTEEEEEETTTCC-----------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CEEEEE-eCCEEEEEECCCCC-----------------EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC
Confidence 356665 59999999764431 122234567888999999999999999999999999999999
Q ss_pred CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEE
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIR 666 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~Ir 666 (695)
++++..+.+|...+.++.+. +..|++++.++.+++|+.......+..+.+|...+.++.|++++. ++++++.|+.|+
T Consensus 99 ~~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~ 175 (318)
T 4ggc_A 99 QKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVN 175 (318)
T ss_dssp TEEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEE
T ss_pred ceeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC-EEEEEecCccee
Confidence 99999999999998887665 579999999999999999988877889999999999999999988 667999999999
Q ss_pred EEECCCCe----EEEEEecCCCcEEEEEEeCCC
Q 005473 667 YWSINNGS----CAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 667 iWDl~tg~----~v~~~~~h~~~VtsVaf~sPd 695 (695)
+||+++++ .+.....|.+.|.+++| +|+
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~ 207 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAW-CPW 207 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEE-CTT
T ss_pred EEECCCCcccccceeeecccCCceEEEEe-cCC
Confidence 99998765 34666688899999998 763
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.82 E-value=3e-19 Score=186.78 Aligned_cols=163 Identities=11% Similarity=0.040 Sum_probs=140.0
Q ss_pred c-EEEEeeCCCcEEEEeC-CCCCCCCCccccccccCCCceeeeEEEecC--CCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 005473 507 R-FVDDGSLDDNVESFLS-PDDADPRDRVGRSAEVGKGFTFTEFQLIPA--STSKVESCHFSPDGKLLATGGHDKKAVLW 582 (695)
Q Consensus 507 ~-~lasgS~D~~V~lw~~-~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~--H~~~V~~v~fspdg~~LaSgs~Dg~V~IW 582 (695)
. ++++|+.|+.|++|+. ..+ ....+.+ |...|.+++|++ +++|++++.|+.|++|
T Consensus 69 ~~~l~~~~~dg~i~~wd~~~~~--------------------~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iw 127 (342)
T 1yfq_A 69 DLQIYVGTVQGEILKVDLIGSP--------------------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVI 127 (342)
T ss_dssp SEEEEEEETTSCEEEECSSSSS--------------------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEE
T ss_pred CcEEEEEcCCCeEEEEEeccCC--------------------ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 7 8999999999999965 332 1255677 999999999999 9999999999999999
Q ss_pred ECCC---------CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-CCe-eEEEEecCCCCeEEEEEec-
Q 005473 583 CTES---------FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN-PDY-SLRTFTGHSTTVMSLDFHP- 650 (695)
Q Consensus 583 Dl~t---------~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t-~~~-~l~~~~gh~~~V~sl~fsp- 650 (695)
|+++ ++++..+. |...|.+++|+|++ |++++.|+.|++||+++ +.. .......|...|.+++|+|
T Consensus 128 d~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 204 (342)
T 1yfq_A 128 DPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK 204 (342)
T ss_dssp CHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG
T ss_pred cccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCC
Confidence 9987 66666666 89999999999886 99999999999999998 543 2345567888999999999
Q ss_pred CCCeEEEEEeCCCcEEEEECCCC------eEEEEEecCCC---------cEEEEEEeCCC
Q 005473 651 SKEDLLCSCDNNSEIRYWSINNG------SCAGVFKNFFE---------SFVSVRVVQPR 695 (695)
Q Consensus 651 dg~~llaSgs~Dg~IriWDl~tg------~~v~~~~~h~~---------~VtsVaf~sPd 695 (695)
++. ++++|+.||.|++||++.+ +++..+.+|.. .|++++| +|+
T Consensus 205 ~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~ 262 (342)
T 1yfq_A 205 EQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF-SPR 262 (342)
T ss_dssp GGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEE-CTT
T ss_pred CCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEE-cCC
Confidence 887 6778999999999999887 88899998866 9999999 985
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.82 E-value=1.8e-18 Score=189.70 Aligned_cols=138 Identities=24% Similarity=0.405 Sum_probs=70.3
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q 005473 546 TEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWD 625 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWD 625 (695)
..+..+.+|...|.+++| ++++|++|+.||+|++||+++++++..+.+|...|.+++| ++.+|++|+.|+.|++||
T Consensus 190 ~~~~~~~~h~~~v~~~~~--~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEE
T ss_pred cEEEEECCCCCcEEEEEe--cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEE
Confidence 444445555555555554 2555555555555555555555555555555555555554 555555555555555555
Q ss_pred CCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEE
Q 005473 626 TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 626 l~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf 691 (695)
++++. ++..+.+|...|.+++| ++. ++++|+.||.|++||+++++++..+.+|...|.++.+
T Consensus 266 ~~~~~-~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 327 (445)
T 2ovr_B 266 PETET-CLHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL 327 (445)
T ss_dssp GGGTE-EEEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE
T ss_pred CCCCc-EeEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE
Confidence 55432 34555555555555554 332 5555555555555555555555555555555555544
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.81 E-value=2e-18 Score=189.38 Aligned_cols=162 Identities=22% Similarity=0.451 Sum_probs=142.9
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
..++++|+.|++|++|+...+ ..+..+.+|...|.++.| ++++|++|+.||.|++||++
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~-------------------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~ 267 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETG-------------------QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE 267 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSC-------------------CEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG
T ss_pred CCEEEEEeCCCEEEEEECCCC-------------------cEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC
Confidence 466788888888888865332 345677899999999999 78899999999999999999
Q ss_pred CCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcE
Q 005473 586 SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEI 665 (695)
Q Consensus 586 t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~I 665 (695)
+++++..+.+|...|.+++| ++.+|++|+.|++|++||+++++ ++..+.+|...|.++.+++ . ++++|+.||.|
T Consensus 268 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i 341 (445)
T 2ovr_B 268 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELKD--N-ILVSGNADSTV 341 (445)
T ss_dssp GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC-EEEEECCCCSCEEEEEEET--T-EEEEEETTSCE
T ss_pred CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC-EEEEEcCCcccEEEEEEeC--C-EEEEEeCCCeE
Confidence 99999999999999999999 78899999999999999999876 4889999999999998864 3 77799999999
Q ss_pred EEEECCCCeEEEEEec---CCCcEEEEEEeCCC
Q 005473 666 RYWSINNGSCAGVFKN---FFESFVSVRVVQPR 695 (695)
Q Consensus 666 riWDl~tg~~v~~~~~---h~~~VtsVaf~sPd 695 (695)
++||+++++++..+.+ |...|++++| +++
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~ 373 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQF-NKN 373 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEE-CSS
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEE-CCC
Confidence 9999999999999986 8899999999 763
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=9.5e-19 Score=187.26 Aligned_cols=143 Identities=9% Similarity=0.057 Sum_probs=113.7
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC---CCeEEEEEcCCCCEE-----------
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST---SKVESCHFSPDGKLL----------- 570 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~---~~V~~v~fspdg~~L----------- 570 (695)
...++++|+.|++|++|+...+ .+++++.+|. ..|.+++|+|+|+++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TG-------------------k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~ 252 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTG-------------------QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES 252 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTC-------------------CEEEEEECCC---CCCEEEEEEETTEEEEEEC-------
T ss_pred CCceEEEecCCCcEEEEECCCC-------------------cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcce
Confidence 4488999999999999976543 3455565543 468888999999876
Q ss_pred -EEEeCCCcEEEEECCCCeEEEEe-----cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeE
Q 005473 571 -ATGGHDKKAVLWCTESFTVKSTL-----EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVM 644 (695)
Q Consensus 571 -aSgs~Dg~V~IWDl~t~~~~~~l-----~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~ 644 (695)
++|+.|++|++||..+++++.++ .+|...+.+.+++ +.++++|+.|++|+|||+.+++ ++.++.+|...|.
T Consensus 253 laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk-~l~tL~gH~~~vv 329 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQ-CTALLPPVSDQHW 329 (356)
T ss_dssp -----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCS-EEEEECCC--CCC
T ss_pred eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCc-EEEEecCCCCCeE
Confidence 66889999999999999988766 4777776666555 7899999999999999999977 5899999987665
Q ss_pred -EEEEecCCCeEEEEEeCCCcEEEEEC
Q 005473 645 -SLDFHPSKEDLLCSCDNNSEIRYWSI 670 (695)
Q Consensus 645 -sl~fspdg~~llaSgs~Dg~IriWDl 670 (695)
+++|+|||+ +|++|+.|++|+|||+
T Consensus 330 s~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 330 SFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCC-EEEEEECCCcEEEecC
Confidence 689999998 6779999999999996
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.79 E-value=5.4e-18 Score=181.68 Aligned_cols=178 Identities=10% Similarity=0.131 Sum_probs=138.1
Q ss_pred CCCCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCC
Q 005473 478 GASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSK 557 (695)
Q Consensus 478 ~s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~ 557 (695)
+...+.++.|++++ .++++|+.| .+++|+.... ..+.... ...
T Consensus 18 h~~~V~~v~fs~dg---------------~~la~g~~~-~~~iw~~~~~-------------------~~~~~~~--~~~ 60 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQ---------------SCLILSTLK-SFEIYNVHPV-------------------AHIMSQE--MRH 60 (355)
T ss_dssp -CCCCCEEEECTTS---------------SEEEEECSS-EEEEEEETTE-------------------EEEEEEE--CSC
T ss_pred CCCceEEEEECCCC---------------CEEEEEcCC-EEEEEecCCc-------------------ceeeeee--cCC
Confidence 45578888998877 678888766 4789964221 1111111 124
Q ss_pred eEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCC---------------------------
Q 005473 558 VESCHFSPDGKLL-ATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSL--------------------------- 609 (695)
Q Consensus 558 V~~v~fspdg~~L-aSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg--------------------------- 609 (695)
+..++|.++++++ ++++.|++|+|||+.+++++..+. |...|.+++|+++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 139 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRF 139 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEE
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccC
Confidence 7889999988877 567778999999999999998886 66789999888752
Q ss_pred --------CEEEE--EeCCCeEEEEECCCCC--------------ee-EEEEecCCCCeEEEEEecCCCeEEEEEeCCCc
Q 005473 610 --------SRLAT--SSADRTVRVWDTENPD--------------YS-LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSE 664 (695)
Q Consensus 610 --------~~LaT--gs~DgtIrvWDl~t~~--------------~~-l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~ 664 (695)
.++++ |+.||.|++||++++. .+ +..+.+|.+.|++++|+|+|. +|++|+.|++
T Consensus 140 ~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~ 218 (355)
T 3vu4_A 140 GGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGT 218 (355)
T ss_dssp EEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCS
T ss_pred CceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCC
Confidence 23333 4678889999988754 11 678899999999999999987 7779999998
Q ss_pred -EEEEECCCCeEEEEEe-c-CCCcEEEEEEeCCC
Q 005473 665 -IRYWSINNGSCAGVFK-N-FFESFVSVRVVQPR 695 (695)
Q Consensus 665 -IriWDl~tg~~v~~~~-~-h~~~VtsVaf~sPd 695 (695)
|+|||+++++++..+. + |...|++|+| +|+
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~-s~~ 251 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDRADVVDMKW-STD 251 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCCSCEEEEEE-CTT
T ss_pred EEEEEECCCCcEEEEEEcCCCCCcEEEEEE-CCC
Confidence 9999999999999998 5 9999999999 986
No 120
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.79 E-value=2.4e-18 Score=180.51 Aligned_cols=144 Identities=17% Similarity=0.324 Sum_probs=125.7
Q ss_pred eeeeEEEecCCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCC-CeEE-EEecccCCCeEEEEEcCCCCEEEEEeCC
Q 005473 544 TFTEFQLIPASTSKVESCHFSPD---GKLLATGGHDKKAVLWCTES-FTVK-STLEEHTQWITDVRFSPSLSRLATSSAD 618 (695)
Q Consensus 544 ~~~~v~~l~~H~~~V~~v~fspd---g~~LaSgs~Dg~V~IWDl~t-~~~~-~~l~~H~~~V~~v~~spdg~~LaTgs~D 618 (695)
....+..+.+|.+.|+||+|+|+ |++|++|+.||.|+|||+++ +..+ ..+.+|...|++++|+|++.+|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 33566778999999999999999 69999999999999999987 5544 7888999999999999999999999999
Q ss_pred CeEEEEECCCCCeeEEEEecCCCCeEEEEE--ecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEE
Q 005473 619 RTVRVWDTENPDYSLRTFTGHSTTVMSLDF--HPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 619 gtIrvWDl~t~~~~l~~~~gh~~~V~sl~f--spdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf 691 (695)
|.|++||++++.. ..+.+|...|++++| +|++. +|++|+.||.|++||+++++++..+..|. .+.++.+
T Consensus 108 g~v~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~ 178 (368)
T 3mmy_A 108 KTAKMWDLSSNQA--IQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADV 178 (368)
T ss_dssp SEEEEEETTTTEE--EEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEE
T ss_pred CcEEEEEcCCCCc--eeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEe
Confidence 9999999998653 346679999999999 77776 67799999999999999999999998775 5566665
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.78 E-value=1.1e-17 Score=179.22 Aligned_cols=111 Identities=24% Similarity=0.295 Sum_probs=94.5
Q ss_pred EEEEEcCCCCEEEE--EeCCCcEEEEECCCCe----------------EEEEecccCCCeEEEEEcCCCCEEEEEeCCCe
Q 005473 559 ESCHFSPDGKLLAT--GGHDKKAVLWCTESFT----------------VKSTLEEHTQWITDVRFSPSLSRLATSSADRT 620 (695)
Q Consensus 559 ~~v~fspdg~~LaS--gs~Dg~V~IWDl~t~~----------------~~~~l~~H~~~V~~v~~spdg~~LaTgs~Dgt 620 (695)
..+++++ .+++. |+.||.|+|||++++. ++..+.+|.+.|++++|+|++.+|++|+.|++
T Consensus 141 ~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 141 GVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred ceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 3455555 55655 5789999999998765 26788999999999999999999999999998
Q ss_pred -EEEEECCCCCeeEEEEe-c-CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 621 -VRVWDTENPDYSLRTFT-G-HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 621 -IrvWDl~t~~~~l~~~~-g-h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
|+|||++++.. +..+. + |...|.+++|+|++. +|++|+.|++|+|||++.+
T Consensus 219 ~v~iwd~~~~~~-~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 219 IIRVFKTEDGVL-VREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEEETTTCCE-EEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCC
T ss_pred EEEEEECCCCcE-EEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCC
Confidence 99999998764 77787 6 999999999999988 6779999999999999765
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=1.7e-18 Score=191.83 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=117.2
Q ss_pred CCCCCeEEEEEcCCCCEEE----EEeCCCcEEEEECCCC--------e---EEEEecccCCCeEEEEEcCC-CCEEEEEe
Q 005473 553 ASTSKVESCHFSPDGKLLA----TGGHDKKAVLWCTESF--------T---VKSTLEEHTQWITDVRFSPS-LSRLATSS 616 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~La----Sgs~Dg~V~IWDl~t~--------~---~~~~l~~H~~~V~~v~~spd-g~~LaTgs 616 (695)
.|...|.+|+|+++|++|+ +|+.|++|+|||+++. + .+..+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4677899999999999999 7888999999998654 2 24556789999999999997 78999999
Q ss_pred CCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCC-------CcEEEE
Q 005473 617 ADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFF-------ESFVSV 689 (695)
Q Consensus 617 ~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~-------~~VtsV 689 (695)
.||+|++||++++. ++....+|...|++++|+|+|. +|++|+.||.|++||++ ++....+..|. ..|.+|
T Consensus 170 ~Dg~v~iwD~~~~~-~~~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 170 ADGSIAVLQVTETV-KVCATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp TTSCEEEEEESSSE-EEEEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred CCCeEEEEEcCCCc-ceeeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 99999999999864 4566677889999999999988 56689999999999998 66777666543 388999
Q ss_pred EEeCCC
Q 005473 690 RVVQPR 695 (695)
Q Consensus 690 af~sPd 695 (695)
+| +|+
T Consensus 247 ~w-~~~ 251 (434)
T 2oit_A 247 LW-IGT 251 (434)
T ss_dssp EE-EET
T ss_pred EE-ecC
Confidence 99 653
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.77 E-value=1.2e-18 Score=189.27 Aligned_cols=138 Identities=18% Similarity=0.188 Sum_probs=107.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE-----EecccCCCeEEEEEcC--------CCCEEEEEeCCC
Q 005473 553 ASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-----TLEEHTQWITDVRFSP--------SLSRLATSSADR 619 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~-----~l~~H~~~V~~v~~sp--------dg~~LaTgs~Dg 619 (695)
.|...+....+.+++.+|++|+.|++|+|||++++.+.. .+.+|.+.|.+|+|+| ++.+|+||+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 344445555566677899999999999999999876543 3579999999999998 788999999999
Q ss_pred eEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEE--------------------
Q 005473 620 TVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF-------------------- 679 (695)
Q Consensus 620 tIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~-------------------- 679 (695)
+|+|||++++.. +..+.+|...|.+++|+|++..+|++|+.|++|++||+++++.....
T Consensus 167 tv~~Wd~~~~~~-~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 167 TLIIWRLTDEGP-ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp EEEEEEEETTEE-EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred eEEEEECCCCce-eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 999999987654 66777788999999999998888999999999999999987654332
Q ss_pred -----ecCCCcEEEEEE
Q 005473 680 -----KNFFESFVSVRV 691 (695)
Q Consensus 680 -----~~h~~~VtsVaf 691 (695)
.+|...|.+++|
T Consensus 246 ~~~~~~~~~~~v~~v~~ 262 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRW 262 (393)
T ss_dssp ------CCSSSCSEEEE
T ss_pred eeeecccccccceeeee
Confidence 367777888887
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.75 E-value=1.8e-16 Score=169.67 Aligned_cols=164 Identities=17% Similarity=0.163 Sum_probs=136.2
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLL-ATGGHDKKAVLWCTE 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~L-aSgs~Dg~V~IWDl~ 585 (695)
.++++++.|+.|++|+...+ ..+..+..|. .+.+++|+|++++| ++++.|+.|++||+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~-------------------~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~ 62 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN-------------------KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTA 62 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT-------------------EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETT
T ss_pred EEEEEcCCCCEEEEEECCCC-------------------eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECC
Confidence 56888999999999966432 3444556665 48999999999976 667789999999999
Q ss_pred CCeEEEEecccCCCeEEEEEcCCCCEEEE-EeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCc
Q 005473 586 SFTVKSTLEEHTQWITDVRFSPSLSRLAT-SSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSE 664 (695)
Q Consensus 586 t~~~~~~l~~H~~~V~~v~~spdg~~LaT-gs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~ 664 (695)
+++++..+..|. .|.+++|+|++++|+. ++.|+.|++||+.+++. +..+..| ..+.+++|+|+++.++++++.|+.
T Consensus 63 ~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 63 TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVKTG-KSPLGLALSPDGKKLYVTNNGDKT 139 (391)
T ss_dssp TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEECS-SSEEEEEECTTSSEEEEEETTTTE
T ss_pred CCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeE-EEEEeCC-CCcceEEECCCCCEEEEEeCCCCE
Confidence 999998887655 8999999999998754 55679999999998654 6666644 578999999999988789999999
Q ss_pred EEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 665 IRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 665 IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
|++||+++++++..+..|. .+.+++| +|+
T Consensus 140 v~~~d~~~~~~~~~~~~~~-~~~~~~~-~~d 168 (391)
T 1l0q_A 140 VSVINTVTKAVINTVSVGR-SPKGIAV-TPD 168 (391)
T ss_dssp EEEEETTTTEEEEEEECCS-SEEEEEE-CTT
T ss_pred EEEEECCCCcEEEEEecCC-CcceEEE-CCC
Confidence 9999999999999998774 5689999 885
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.75 E-value=3.6e-16 Score=167.22 Aligned_cols=164 Identities=18% Similarity=0.197 Sum_probs=133.5
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGG-HDKKAVLWCTE 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl~ 585 (695)
.++++++.|+.|++|+...+ ..+..+..|. .|.+++|+|++++|+.++ .|+.|++||+.
T Consensus 45 ~l~~~~~~d~~i~v~d~~~~-------------------~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 45 KVYVANAHSNDVSIIDTATN-------------------NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp EEEEEEGGGTEEEEEETTTT-------------------EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCCeEEEEECCCC-------------------eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 34578889999999965332 2334444444 799999999999876554 67999999999
Q ss_pred CCeEEEEecccCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCc
Q 005473 586 SFTVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSE 664 (695)
Q Consensus 586 t~~~~~~l~~H~~~V~~v~~spdg~~L-aTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~ 664 (695)
+++.+..+..| ..+.+++|+|++++| ++++.|+.|++||+++++. +..+..| ..+.+++|+|+++.++++++.|+.
T Consensus 105 ~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~ 181 (391)
T 1l0q_A 105 SNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVSVG-RSPKGIAVTPDGTKVYVANFDSMS 181 (391)
T ss_dssp TTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEECC-SSEEEEEECTTSSEEEEEETTTTE
T ss_pred CCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEecC-CCcceEEECCCCCEEEEEeCCCCE
Confidence 99998888754 568999999999977 7888899999999998654 6666655 567999999999988789999999
Q ss_pred EEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 665 IRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 665 IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
|++||+++++++..+.. ...+.+++| +|+
T Consensus 182 v~~~d~~~~~~~~~~~~-~~~~~~~~~-~~~ 210 (391)
T 1l0q_A 182 ISVIDTVTNSVIDTVKV-EAAPSGIAV-NPE 210 (391)
T ss_dssp EEEEETTTTEEEEEEEC-SSEEEEEEE-CTT
T ss_pred EEEEECCCCeEEEEEec-CCCccceEE-CCC
Confidence 99999999999888864 467899999 885
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.74 E-value=2.1e-16 Score=171.44 Aligned_cols=166 Identities=8% Similarity=0.053 Sum_probs=139.4
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGG-HDKKAVLWCT 584 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl 584 (695)
..++++++.|+.|++|+.... ..+..+..|...+.+++|+|+++++++++ .|+.|++||+
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTL-------------------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTC-------------------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCEEEEEECCCc-------------------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence 478899999999999966332 24455668888999999999999886555 7999999999
Q ss_pred CCCeEEEEecccCCCeEEEEEcCCCCEEEEEe--------CCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEE
Q 005473 585 ESFTVKSTLEEHTQWITDVRFSPSLSRLATSS--------ADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 585 ~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs--------~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~ll 656 (695)
++++.+..+..+ ..+.+++|+|++.+|++++ .|+.|++||+++++. +..+ .|...+.+++|+|+++.++
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~-~~~~-~~~~~~~~~~~~~~g~~l~ 318 (433)
T 3bws_A 242 KTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL-IDTI-GPPGNKRHIVSGNTENKIY 318 (433)
T ss_dssp TTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE-EEEE-EEEECEEEEEECSSTTEEE
T ss_pred CCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE-Eeec-cCCCCcceEEECCCCCEEE
Confidence 999998888764 4599999999999999887 588999999998653 4443 4566899999999999888
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 657 CSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 657 aSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++++.|+.|++||+.+++++..+. +...+.+++| +|+
T Consensus 319 ~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~-s~d 355 (433)
T 3bws_A 319 VSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIAL-SPD 355 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEE-CTT
T ss_pred EEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEE-cCC
Confidence 899999999999999999998886 6678899999 885
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.71 E-value=2.4e-16 Score=171.01 Aligned_cols=172 Identities=9% Similarity=0.054 Sum_probs=138.2
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
..++++++.|+.|++|+...+... .......+.+|.+.|.+++|+++++++++++.|+.|++||++
T Consensus 134 ~~~~~~~~~~~~i~~~d~~~g~~~--------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 134 TRLAIPLLEDEGMDVLDINSGQTV--------------RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp SEEEEEBTTSSSEEEEETTTCCEE--------------EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT
T ss_pred CeEEEEeCCCCeEEEEECCCCeEe--------------eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC
Confidence 377888888999999976543210 000111346889999999999999999999999999999999
Q ss_pred CCeEEEEecccCCCeEEEEEcCCCCEEEE-EeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEe----
Q 005473 586 SFTVKSTLEEHTQWITDVRFSPSLSRLAT-SSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCD---- 660 (695)
Q Consensus 586 t~~~~~~l~~H~~~V~~v~~spdg~~LaT-gs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs---- 660 (695)
+++.+..+..|...+.+++|+|++.++++ ++.|+.|++||+++++. +..+..+ ..+.+++|+|++..+++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKTDKI-GLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEECCCC-SEEEEEEECTTSSEEEEEEEESCT
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEecCC-CCceEEEEcCCCCEEEEEECCCCc
Confidence 99999999999999999999999998854 45799999999998653 6666654 56999999999986664443
Q ss_pred ---CCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 661 ---NNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 661 ---~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|+.|++||+++++.+..+ .|...+.+++| +|+
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~-~~~ 313 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVS-GNT 313 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEE-CSS
T ss_pred cccCCCeEEEEECCCCcEEeec-cCCCCcceEEE-CCC
Confidence 5889999999999888776 45568899999 885
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.71 E-value=1.4e-16 Score=176.54 Aligned_cols=170 Identities=11% Similarity=0.053 Sum_probs=131.1
Q ss_pred CCCceEEEEecCCCccccccCCccCCCCcEEE----EeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCC
Q 005473 479 ASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVD----DGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAS 554 (695)
Q Consensus 479 s~~~s~l~~~~dg~~~la~s~~~l~~~~~~la----sgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H 554 (695)
...+..+.|++++ ++++ +|+.|++|++|+......+. ......+..+..+.+|
T Consensus 92 ~~~v~~l~~spdg---------------~~lav~~~sgs~d~~v~iwd~~~~~~~~--------~~~~~~~~~~~~~~~h 148 (434)
T 2oit_A 92 KFPIHHLALSCDN---------------LTLSACMMSSEYGSIIAFFDVRTFSNEA--------KQQKRPFAYHKLLKDA 148 (434)
T ss_dssp SSCEEEEEECTTS---------------CEEEEEEEETTTEEEEEEEEHHHHHCTT--------CSSCCCSEEEECCCSG
T ss_pred CCcccEEEEcCCC---------------CEEEEEEeccCCCceEEEEEccccccCC--------cCCcceeeeeeccCCC
Confidence 3457778888776 5566 89999999999764321000 0001122345667789
Q ss_pred CCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeE
Q 005473 555 TSKVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 555 ~~~V~~v~fspd-g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
...|.+|+|+|+ +.+|++|+.||+|+|||++++..+....+|...|++++|+|++.+|++|+.||+|++||++ +.. .
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~-~ 226 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE-K 226 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE-E
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc-c
Confidence 999999999998 8899999999999999999988777778899999999999999999999999999999998 333 4
Q ss_pred EEEecCC-------CCeEEEEEecCCCeEEEEEeCCCc------EEEEECCCC
Q 005473 634 RTFTGHS-------TTVMSLDFHPSKEDLLCSCDNNSE------IRYWSINNG 673 (695)
Q Consensus 634 ~~~~gh~-------~~V~sl~fspdg~~llaSgs~Dg~------IriWDl~tg 673 (695)
..+..|. ..|.+++|++++..+++++..||. +++||+++.
T Consensus 227 ~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 227 KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 5554442 379999999988766666666643 899999864
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.67 E-value=7.2e-15 Score=161.27 Aligned_cols=175 Identities=14% Similarity=0.117 Sum_probs=134.9
Q ss_pred CCceEEEEecCCCccccccCCccCCCCcEEEEeeCCC---cEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC
Q 005473 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDD---NVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS 556 (695)
Q Consensus 480 ~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~---~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~ 556 (695)
..+..+.|+|++ +.++.++.|+ .|++|+...+. ...+..|..
T Consensus 179 ~~v~~~~~Spdg---------------~~la~~s~~~~~~~i~~~d~~tg~--------------------~~~l~~~~~ 223 (415)
T 2hqs_A 179 QPLMSPAWSPDG---------------SKLAYVTFESGRSALVIQTLANGA--------------------VRQVASFPR 223 (415)
T ss_dssp SCEEEEEECTTS---------------SEEEEEECTTSSCEEEEEETTTCC--------------------EEEEECCSS
T ss_pred CcceeeEEcCCC---------------CEEEEEEecCCCcEEEEEECCCCc--------------------EEEeecCCC
Confidence 356667777766 6678887775 88888654321 124556778
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCc--EEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC-CC--eEEEEECCCCC
Q 005473 557 KVESCHFSPDGKLLA-TGGHDKK--AVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA-DR--TVRVWDTENPD 630 (695)
Q Consensus 557 ~V~~v~fspdg~~La-Sgs~Dg~--V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~-Dg--tIrvWDl~t~~ 630 (695)
.+.+++|+|||++|+ +++.|+. |++||+.++++ ..+..|...+.+++|+|++++|++++. ++ .|++||+.++.
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 899999999999877 6666655 99999998776 577788899999999999999988876 44 68888998765
Q ss_pred eeEEEEecCCCCeEEEEEecCCCeEEEEEeCC--CcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 631 YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN--SEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 631 ~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D--g~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+..+..|...+.+++|+|+|+.+++++..+ ..|++||+.++++. .+..|. .+.+++| +|+
T Consensus 303 --~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~-spd 364 (415)
T 2hqs_A 303 --PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSL-APN 364 (415)
T ss_dssp --CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEE-CTT
T ss_pred --EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEE-cCC
Confidence 355566777899999999999766555543 58999999988774 455564 8899999 986
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.65 E-value=7e-15 Score=161.35 Aligned_cols=142 Identities=20% Similarity=0.197 Sum_probs=117.5
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEE-EEeCCCe--EE
Q 005473 549 QLIPASTSKVESCHFSPDGKLLATGGHDK---KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRT--VR 622 (695)
Q Consensus 549 ~~l~~H~~~V~~v~fspdg~~LaSgs~Dg---~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~La-Tgs~Dgt--Ir 622 (695)
..+.+|...|.+++|+|||++|++++.|+ .|++||+.++++. .+..|.+.+.+++|+|+|++|+ +++.|+. |+
T Consensus 172 ~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~ 250 (415)
T 2hqs_A 172 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY 250 (415)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEE
Confidence 45567888999999999999999999885 9999999998875 5667888999999999999887 6666654 99
Q ss_pred EEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC--cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 623 VWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS--EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 623 vWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg--~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+||++++. +..+..|...+.+++|+|||+.+++++..++ .|++||+.++++ ..+..|...+.+++| +|+
T Consensus 251 ~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~-spd 321 (415)
T 2hqs_A 251 VMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADV-SSD 321 (415)
T ss_dssp EEETTTCC--EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEE-CTT
T ss_pred EEECCCCC--EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEE-CCC
Confidence 99999865 3677788889999999999997776665555 677889988764 455667788999999 986
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=1.4e-14 Score=146.33 Aligned_cols=166 Identities=12% Similarity=0.101 Sum_probs=124.3
Q ss_pred cEEEEeeCCCcEEEEeCCC-CCCCCCccccccccCCCceeeeEEEecCC-CCCeEEEEEcCCCCEEEEEeC--CCcEEEE
Q 005473 507 RFVDDGSLDDNVESFLSPD-DADPRDRVGRSAEVGKGFTFTEFQLIPAS-TSKVESCHFSPDGKLLATGGH--DKKAVLW 582 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~-~~~~~~~~~~~~d~~~~~~~~~v~~l~~H-~~~V~~v~fspdg~~LaSgs~--Dg~V~IW 582 (695)
+++++++ ++.|.+|+... +. .......| ...|.+++|+|++++|++++. ++.+.||
T Consensus 54 ~~l~~~~-~~~i~~~d~~~~~~-------------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 54 KYLLLNS-EGLLYRLSLAGDPS-------------------PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp SEEEEEE-TTEEEEEESSSCCS-------------------CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred CEEEEEc-CCeEEEEeCCCCCC-------------------ceEeccccccccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 5667665 78999997644 21 11222333 467899999999999999993 3455555
Q ss_pred --ECCCCeEEEEecccCCCeEEEEEcCCCCEEE-EEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEE
Q 005473 583 --CTESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSC 659 (695)
Q Consensus 583 --Dl~t~~~~~~l~~H~~~V~~v~~spdg~~La-Tgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSg 659 (695)
|+.++. ...+..+ ..+.+++|+|++++|+ +++.|+.++||+++........+..|...+.+++|+|+++.+++++
T Consensus 114 ~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 114 LLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 545544 3445443 3489999999999876 7788999999997543333567777888999999999999777777
Q ss_pred eCCCcEEEEECC-CCeEEEEEecCCCcEEEEEEeCCC
Q 005473 660 DNNSEIRYWSIN-NGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 660 s~Dg~IriWDl~-tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
..|+.++||+++ .+..+..+..|...+.+++| +|+
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-s~d 227 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHP-SPS 227 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEE-CTT
T ss_pred cCCCCccEEEECCCCCCcEEEecCCcccCCeEE-CCC
Confidence 779999999987 56778888888889999999 986
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=3e-14 Score=143.94 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=122.4
Q ss_pred EEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-Ce
Q 005473 510 DDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES-FT 588 (695)
Q Consensus 510 asgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t-~~ 588 (695)
..++.|+.|++|+...+ ....+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++
T Consensus 16 ~~~~~~~~i~~~d~~~~--------------------~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~ 74 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTR--------------------KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS 74 (297)
T ss_dssp --CCCCEEEEEEETTTT--------------------EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS
T ss_pred CCCCcceeEEEEeCCCC--------------------ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC
Confidence 34567888999965332 1223455788899999999999999987 78999999999 88
Q ss_pred EEEEeccc-CCCeEEEEEcCCCCEEEEEe--CCCeEEEE--ECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 589 VKSTLEEH-TQWITDVRFSPSLSRLATSS--ADRTVRVW--DTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 589 ~~~~l~~H-~~~V~~v~~spdg~~LaTgs--~DgtIrvW--Dl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
....+..| ...|.+++|+|++++|++++ .++.++|| |+.++. ...+..+. .+.+++|+|+++.++++++.|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 75 PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT--PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC--CEECCSSS-SEEEEEECTTSSEEEEEEEETT
T ss_pred ceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc--eEEeecCC-CccceEECCCCCEEEEEECCCC
Confidence 77666666 47889999999999999998 33455555 545433 45555443 4899999999998887888999
Q ss_pred cEEEEECCC-CeEEEEEecCCCcEEEEEEeCCC
Q 005473 664 EIRYWSINN-GSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 664 ~IriWDl~t-g~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.++||+++. +..+..+..|...+.+++| +|+
T Consensus 152 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-s~d 183 (297)
T 2ojh_A 152 VFDIYSMDIDSGVETRLTHGEGRNDGPDY-SPD 183 (297)
T ss_dssp EEEEEEEETTTCCEEECCCSSSCEEEEEE-CTT
T ss_pred ceEEEEEECCCCcceEcccCCCccccceE-CCC
Confidence 999999642 3455667788889999999 985
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.57 E-value=5.1e-13 Score=139.91 Aligned_cols=158 Identities=12% Similarity=0.113 Sum_probs=126.2
Q ss_pred CCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q 005473 514 LDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL 593 (695)
Q Consensus 514 ~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l 593 (695)
.++.|.+|+.... ..+..+..+...+.+++|+|+|++|++++.++.|.+||+.+++.+..+
T Consensus 162 ~~~~i~~~d~~~~-------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 162 KESVIWVVDGGNI-------------------KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp SSCEEEEEETTTT-------------------EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCceEEEEcCCCC-------------------ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 4777888865322 233444445556889999999999999999999999999999988777
Q ss_pred cc----cCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEE
Q 005473 594 EE----HTQWITDVRFSPSLSRLATSSA-DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYW 668 (695)
Q Consensus 594 ~~----H~~~V~~v~~spdg~~LaTgs~-DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriW 668 (695)
.. +...+.+++|+|++++|++++. ++.|++||+.+++. +..+.... ..+++|+|+++.+++++..++.|.+|
T Consensus 223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI-LAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE-EEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEE
Confidence 54 5667889999999998776655 59999999998765 55555433 36799999999888888789999999
Q ss_pred ECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 669 SINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 669 Dl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
|+.+++.+..+..+. .+.+++| +|+
T Consensus 300 d~~~~~~~~~~~~~~-~~~~~~~-s~d 324 (353)
T 3vgz_A 300 DAKSYKVVKTFDTPT-HPNSLAL-SAD 324 (353)
T ss_dssp ETTTTEEEEEEECCS-EEEEEEE-CTT
T ss_pred ECCCCeEEEEEecCC-CCCeEEE-cCC
Confidence 999999998887654 6789999 886
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.56 E-value=4.4e-13 Score=140.42 Aligned_cols=134 Identities=12% Similarity=0.123 Sum_probs=113.1
Q ss_pred eEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 558 VESCHFSPDGKLLATGG--HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs--~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
+.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...+.+++|+|++++|++++.++.|.+||+.+++. +..
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~-~~~ 221 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI-LSR 221 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE-EEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE-EEE
Confidence 68999999999887776 478999999999999988876677789999999999999999999999999998664 554
Q ss_pred Eec----CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTG----HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~g----h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.. +...+.+++|+|+++.+++++..++.|.+||+.+++.+..+..+.. ..++| +|+
T Consensus 222 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~-s~d 282 (353)
T 3vgz_A 222 KKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLF-NPA 282 (353)
T ss_dssp EECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEE-ETT
T ss_pred EEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEE-CCC
Confidence 443 5567889999999998887777789999999999999988875442 56888 775
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.54 E-value=3.5e-13 Score=153.57 Aligned_cols=165 Identities=9% Similarity=0.014 Sum_probs=134.1
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC--
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCT-- 584 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl-- 584 (695)
.++++++.|++|.+|+...+ ..+.++..+.. +.+++|+|||++|++++.|++|++||+
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~-------------------~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~ 209 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSK-------------------KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWA 209 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTC-------------------CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred EEEEEEcCCCeEEEEECCCc-------------------eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcC
Confidence 67888999999999965332 23455553333 899999999999999999999999999
Q ss_pred CCCeEEEEecccCCCeEEEEEcC----CCCEEEEEeC-CCeEEEEECCCCCeeEEEEec----------C-CCCeEEEEE
Q 005473 585 ESFTVKSTLEEHTQWITDVRFSP----SLSRLATSSA-DRTVRVWDTENPDYSLRTFTG----------H-STTVMSLDF 648 (695)
Q Consensus 585 ~t~~~~~~l~~H~~~V~~v~~sp----dg~~LaTgs~-DgtIrvWDl~t~~~~l~~~~g----------h-~~~V~sl~f 648 (695)
.+++++.++. +...+..++|+| ++++|++++. +++|.|||..+.+. +.++.. | ...|.++.|
T Consensus 210 ~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~-~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 210 KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP-KQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE-EEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc-ceeecccCcccCccccccCCceEEEEE
Confidence 8899888887 455689999999 9999999884 89999999998664 666653 2 237899999
Q ss_pred ecCCCeEEEEEeCCCcEEEEECCCCeEEE--EEecCCCcEEEEEEeCCC
Q 005473 649 HPSKEDLLCSCDNNSEIRYWSINNGSCAG--VFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 649 spdg~~llaSgs~Dg~IriWDl~tg~~v~--~~~~h~~~VtsVaf~sPd 695 (695)
+|+++.+++++..++.|.+||+.+++++. .+ .+...+..++| +|+
T Consensus 288 s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~-spd 334 (543)
T 1nir_A 288 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGW-DSS 334 (543)
T ss_dssp CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEE-CTT
T ss_pred CCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceE-CCC
Confidence 99999999999999999999998876544 44 35566788999 885
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=6.6e-13 Score=137.99 Aligned_cols=171 Identities=13% Similarity=0.168 Sum_probs=119.7
Q ss_pred cEEEEeeCC-CcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEC
Q 005473 507 RFVDDGSLD-DNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGH-DKKAVLWCT 584 (695)
Q Consensus 507 ~~lasgS~D-~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~-Dg~V~IWDl 584 (695)
+++++++.+ +.|.+|+.... ......+..+..+. .+.+++|+|++++|++++. ++.|++||+
T Consensus 50 ~~l~~~~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 50 RYLYVGVRPEFRVLAYRIAPD---------------DGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTT---------------TCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CEEEEeecCCCeEEEEEecCC---------------CCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 666666665 89999966421 11123344444444 6899999999998877765 889999999
Q ss_pred ---CCCeEEEEecccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCC-CCee-EE--EEec-CCCCeEEEEEecCCCeE
Q 005473 585 ---ESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDTEN-PDYS-LR--TFTG-HSTTVMSLDFHPSKEDL 655 (695)
Q Consensus 585 ---~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs-~DgtIrvWDl~t-~~~~-l~--~~~g-h~~~V~sl~fspdg~~l 655 (695)
...+.+..+..+ ..+.+++|+|++++|++++ .|+.|++||+.+ ++.. +. .+.. ....+.+++|+|++..+
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp ETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 444455555543 4588999999999888877 899999999987 4321 11 2232 34578899999999988
Q ss_pred EEEEeCCCcEEEEECCC--CeE--EEEEe---cC---CCcEEEEEEeCCC
Q 005473 656 LCSCDNNSEIRYWSINN--GSC--AGVFK---NF---FESFVSVRVVQPR 695 (695)
Q Consensus 656 laSgs~Dg~IriWDl~t--g~~--v~~~~---~h---~~~VtsVaf~sPd 695 (695)
++++..++.|++||++. ++. +..+. .+ ...+.+++| +|+
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~-s~d 241 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI-TPD 241 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE-CTT
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE-CCC
Confidence 87887899999999953 432 33333 11 235678999 885
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.52 E-value=9.3e-13 Score=137.30 Aligned_cols=167 Identities=12% Similarity=0.089 Sum_probs=123.1
Q ss_pred EEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEEC
Q 005473 508 FVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDK---KAVLWCT 584 (695)
Q Consensus 508 ~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg---~V~IWDl 584 (695)
+++++..++.|.+|+...+. . ....+..+..++.+++|+|+|++|+++..++ .|.+||+
T Consensus 54 l~~~~~~~~~i~~~d~~~~~----------------~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~ 115 (331)
T 3u4y_A 54 VVVTSDFCQTLVQIETQLEP----------------P--KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSF 115 (331)
T ss_dssp EEEEESTTCEEEEEECSSSS----------------C--EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEET
T ss_pred EEEEeCCCCeEEEEECCCCc----------------e--eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEEC
Confidence 44444457888888654321 0 1344455666666699999999999555553 8999999
Q ss_pred CCCeEEEEecccCCCeEEEEEcCCCCEEE-EEeCCCe-EEEEECCCCCeeE---EEEecCCCCeEEEEEecCCCeEEEEE
Q 005473 585 ESFTVKSTLEEHTQWITDVRFSPSLSRLA-TSSADRT-VRVWDTENPDYSL---RTFTGHSTTVMSLDFHPSKEDLLCSC 659 (695)
Q Consensus 585 ~t~~~~~~l~~H~~~V~~v~~spdg~~La-Tgs~Dgt-IrvWDl~t~~~~l---~~~~gh~~~V~sl~fspdg~~llaSg 659 (695)
.+++.+..+.. ...+.+++|+|++++|+ ++..++. |++|+++...... .....+...+.+++|+|+|+.+++++
T Consensus 116 ~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 116 LKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp TTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred CCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEe
Confidence 99998887765 44568999999998554 4556688 9999998654321 12223445689999999999888888
Q ss_pred eCCCcEEEEECCCCeE---EEEEecCCCcEEEEEEeCCC
Q 005473 660 DNNSEIRYWSINNGSC---AGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 660 s~Dg~IriWDl~tg~~---v~~~~~h~~~VtsVaf~sPd 695 (695)
..++.|++||+.+++. +..+..+ ..+..++| +|+
T Consensus 195 ~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~-spd 231 (331)
T 3u4y_A 195 LIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV-SRD 231 (331)
T ss_dssp TTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE-CTT
T ss_pred CCCCeEEEEECCCCcccceeeeccCC-CCCceEEE-CCC
Confidence 8899999999999988 8888755 56688999 886
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.52 E-value=1.2e-12 Score=136.32 Aligned_cols=166 Identities=11% Similarity=0.070 Sum_probs=125.1
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGH-DKKAVLWCTE 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~-Dg~V~IWDl~ 585 (695)
.++++++.++.|.+|+...+ ..+..+..+...+ +++|+|+|++|++++. ++.|++||+.
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~-------------------~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~ 70 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTL-------------------EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQ 70 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTC-------------------CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECS
T ss_pred EEEEEecCCCeEEEEeCccc-------------------ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECC
Confidence 56788889999999966433 1223334455556 9999999997777666 8999999999
Q ss_pred CCeE-EEEecccCCCeEEEEEcCCCCEEEEEeCCC---eEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeC
Q 005473 586 SFTV-KSTLEEHTQWITDVRFSPSLSRLATSSADR---TVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDN 661 (695)
Q Consensus 586 t~~~-~~~l~~H~~~V~~v~~spdg~~LaTgs~Dg---tIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~ 661 (695)
+++. ...+..+..++.+++|+|++++|+++..++ .|++||+.+++. +..+.. ...+.+++|+|+|+.+++++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 71 LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF-ISTIPI-PYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE-EEEEEC-CTTEEEEEECTTSSCEEEEEET
T ss_pred CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe-EEEEEC-CCCccceEECCCCCEEEEEecC
Confidence 9887 777777777776699999999999655553 899999998654 566554 4557999999999988888887
Q ss_pred CCc-EEEEECCCCeEE----EEEecCCCcEEEEEEeCCC
Q 005473 662 NSE-IRYWSINNGSCA----GVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 662 Dg~-IriWDl~tg~~v----~~~~~h~~~VtsVaf~sPd 695 (695)
++. |++|++.....+ .....+...+..++| +|+
T Consensus 149 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-spd 186 (331)
T 3u4y_A 149 SANTVRRFKIDADGVLFDTGQEFISGGTRPFNITF-TPD 186 (331)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEE-CTT
T ss_pred CCceEEEEEECCCCcEeecCCccccCCCCccceEE-CCC
Confidence 788 999999864332 122233455789999 886
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.51 E-value=1.4e-12 Score=148.56 Aligned_cols=161 Identities=11% Similarity=0.084 Sum_probs=126.6
Q ss_pred CCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcC----CCCEEEEEeC-CC
Q 005473 503 TDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP----DGKLLATGGH-DK 577 (695)
Q Consensus 503 ~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fsp----dg~~LaSgs~-Dg 577 (695)
.+..+++++++.|++|.+|+.... +...+..+.. ...+..++|+| ||++|++++. ++
T Consensus 187 spdg~~l~v~~~d~~V~v~D~~~~-----------------t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 187 SASGRYLLVIGRDARIDMIDLWAK-----------------EPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSS-----------------SCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred CCCCCEEEEECCCCeEEEEECcCC-----------------CCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 334488999999999999966210 1134455553 34579999999 9999999985 89
Q ss_pred cEEEEECCCCeEEEEecc----------cC-CCeEEEEEcCCCCE-EEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEE
Q 005473 578 KAVLWCTESFTVKSTLEE----------HT-QWITDVRFSPSLSR-LATSSADRTVRVWDTENPDYSLRTFTGHSTTVMS 645 (695)
Q Consensus 578 ~V~IWDl~t~~~~~~l~~----------H~-~~V~~v~~spdg~~-LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~s 645 (695)
+|.|||..+++++.++.. |. ..+.++.++|++.. +++...+++|.+||+.+.+.+......+...+.+
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~ 328 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHD 328 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCC
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccC
Confidence 999999999999988864 22 37899999997665 5667789999999998866433223346677899
Q ss_pred EEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 646 LDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 646 l~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
+.|+|+|+++++++..+++|.+||+.+++++..+..
T Consensus 329 ~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 329 GGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred ceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc
Confidence 999999998888888899999999999999998884
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.50 E-value=2.6e-12 Score=133.47 Aligned_cols=170 Identities=15% Similarity=0.190 Sum_probs=118.6
Q ss_pred cEEE-EeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEC
Q 005473 507 RFVD-DGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGG-HDKKAVLWCT 584 (695)
Q Consensus 507 ~~la-sgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl 584 (695)
++++ ++..++.|.+|+..+ +.....+..+..+. .+.+++|+|++++|++++ .|+.|++||+
T Consensus 96 ~~l~~~~~~~~~i~~~d~~~----------------~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 96 QFVFVGSYNAGNVSVTRLED----------------GLPVGVVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp SEEEEEETTTTEEEEEEEET----------------TEEEEEEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CEEEEEecCCCeEEEEECCC----------------CccccccccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 4444 444578899996531 11223344444443 489999999999888887 8999999999
Q ss_pred CC-CeEEE----Eecc-cCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCC--CCee-EEEEe----cC--CCCeEEEEE
Q 005473 585 ES-FTVKS----TLEE-HTQWITDVRFSPSLSRLATSS-ADRTVRVWDTEN--PDYS-LRTFT----GH--STTVMSLDF 648 (695)
Q Consensus 585 ~t-~~~~~----~l~~-H~~~V~~v~~spdg~~LaTgs-~DgtIrvWDl~t--~~~~-l~~~~----gh--~~~V~sl~f 648 (695)
.+ ++... .+.. ....+.+++|+|++++|++++ .++.|++||++. +... +..+. ++ ...+.+++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 87 65432 2222 345788999999999775554 789999999954 3221 22222 11 235778999
Q ss_pred ecCCCeEEEEEeCCCcEEEEECC--C--CeEEEEEecCCCcEEEEEEeCCC
Q 005473 649 HPSKEDLLCSCDNNSEIRYWSIN--N--GSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 649 spdg~~llaSgs~Dg~IriWDl~--t--g~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+|+++.+++++..++.|++||+. + .+.+..+..+.. +.+++| +|+
T Consensus 239 s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~-s~d 287 (343)
T 1ri6_A 239 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNV-DHS 287 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEE-CTT
T ss_pred CCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEE-CCC
Confidence 99999888788889999999998 3 355666665554 788999 885
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.49 E-value=8.6e-14 Score=161.65 Aligned_cols=165 Identities=12% Similarity=0.034 Sum_probs=121.6
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC---CeEEEEEcCCCCEEEEEeCC-------
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS---KVESCHFSPDGKLLATGGHD------- 576 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~---~V~~v~fspdg~~LaSgs~D------- 576 (695)
+++++ +.|++|++|+...+. ....+.+|.. .|.+++|||||++|++++.+
T Consensus 29 ~~~~~-~~dg~i~~~d~~~g~-------------------~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 29 EFIYR-EQKGTVRLWNVETNT-------------------STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHS 88 (723)
T ss_dssp CBCCC-CSSSCEEEBCGGGCC-------------------CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSC
T ss_pred cEEEE-eCCCCEEEEECCCCc-------------------EEEEeccccccccccceEEECCCCCEEEEEecCccceeec
Confidence 34444 578899999653331 2233445554 49999999999999999875
Q ss_pred --CcEEEEECCCCeEEEEe---cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCC---------
Q 005473 577 --KKAVLWCTESFTVKSTL---EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTT--------- 642 (695)
Q Consensus 577 --g~V~IWDl~t~~~~~~l---~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~--------- 642 (695)
+.|+|||+.++++ ..+ .+|...|.+++|+|||+.|++++. +.|++||+.++.. ......+...
T Consensus 89 ~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDW 165 (723)
T ss_dssp CCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCH
T ss_pred ceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-EEEecCCCCCceECcccce
Confidence 7788999998876 333 345556899999999999999885 7999999998664 4444443332
Q ss_pred ---------eEEEEEecCCCeEEEEEeCC---------------------------------CcEEEEECCCCeEEEEEe
Q 005473 643 ---------VMSLDFHPSKEDLLCSCDNN---------------------------------SEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 643 ---------V~sl~fspdg~~llaSgs~D---------------------------------g~IriWDl~tg~~v~~~~ 680 (695)
+.+++|+|||+.|+++...+ ..|++||+.++++...+.
T Consensus 166 v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~ 245 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM 245 (723)
T ss_dssp HHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC
T ss_pred eEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee
Confidence 37899999999666544321 279999999988777776
Q ss_pred cC------CCcEEEEEEeCCC
Q 005473 681 NF------FESFVSVRVVQPR 695 (695)
Q Consensus 681 ~h------~~~VtsVaf~sPd 695 (695)
.| ...|.+++| +||
T Consensus 246 ~~~~~~~~~~~~~~~~~-SpD 265 (723)
T 1xfd_A 246 PPDDPRMREYYITMVKW-ATS 265 (723)
T ss_dssp CCCCGGGSSEEEEEEEE-SSS
T ss_pred CCccCCCccceeEEEEE-eCC
Confidence 54 678899999 996
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.46 E-value=1e-12 Score=160.47 Aligned_cols=163 Identities=5% Similarity=-0.064 Sum_probs=131.0
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC-CeEEEEEcCCCCEEEEEeCCCcEE-EEEC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS-KVESCHFSPDGKLLATGGHDKKAV-LWCT 584 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~-~V~~v~fspdg~~LaSgs~Dg~V~-IWDl 584 (695)
++++.++ ++.|.+|....+ ....+..|.. .+.+++|+ ||+.|++++.+..|+ +||+
T Consensus 309 ~~la~~~-~~~i~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~ 366 (1045)
T 1k32_A 309 DLIAFVS-RGQAFIQDVSGT--------------------YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDY 366 (1045)
T ss_dssp GCEEEEE-TTEEEEECTTSS--------------------BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEET
T ss_pred CEEEEEE-cCEEEEEcCCCC--------------------ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEEC
Confidence 4555555 677888854221 1223456666 79999999 999999999888899 9999
Q ss_pred CCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCC--
Q 005473 585 ESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN-- 662 (695)
Q Consensus 585 ~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D-- 662 (695)
.+++.. .+.+|...+.+++|+|+|++|++++.++.|++||+.++.. ...+.+|.+.|.+++|+|||+.+++++..+
T Consensus 367 ~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~-~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~ 444 (1045)
T 1k32_A 367 RTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP-TVIERSREAMITDFTISDNSRFIAYGFPLKHG 444 (1045)
T ss_dssp TTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEEEECSSSCCCCEEECTTSCEEEEEEEECSS
T ss_pred CCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce-EEeccCCCCCccceEECCCCCeEEEEecCccc
Confidence 887655 4448889999999999999999999999999999998764 566668999999999999999766554432
Q ss_pred -------CcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 663 -------SEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 663 -------g~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+.|++||+.+++ +..+..|...+.+++| +||
T Consensus 445 ~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~-spd 482 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAF-DAD 482 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEE-CTT
T ss_pred cccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceE-cCC
Confidence 489999999887 7778888888999999 986
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=1.5e-11 Score=129.63 Aligned_cols=173 Identities=10% Similarity=0.085 Sum_probs=120.1
Q ss_pred CcEEEEee-CCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEec---------CCCCCeEEEEEcCCCCEEEEEeC
Q 005473 506 DRFVDDGS-LDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIP---------ASTSKVESCHFSPDGKLLATGGH 575 (695)
Q Consensus 506 ~~~lasgS-~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~---------~H~~~V~~v~fspdg~~LaSgs~ 575 (695)
.+++++++ .++.|.+|+...+.. ...+..+. .+...+.+++|+|+|++++++..
T Consensus 97 g~~l~~~~~~~~~v~v~~~~~~g~----------------~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 97 RQLVYSANYHKGTAEVMKIAADGA----------------LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp TTEEEEEETTTTEEEEEEECTTSC----------------EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCC----------------eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC
Confidence 35566665 678899997643211 11111111 12345899999999996666667
Q ss_pred CCcEEEEECC-CCeEEE--Eeccc-CCCeEEEEEcCCCCEEEE-EeCCCeEEEEECCC--CCe-eEEEEecCC------C
Q 005473 576 DKKAVLWCTE-SFTVKS--TLEEH-TQWITDVRFSPSLSRLAT-SSADRTVRVWDTEN--PDY-SLRTFTGHS------T 641 (695)
Q Consensus 576 Dg~V~IWDl~-t~~~~~--~l~~H-~~~V~~v~~spdg~~LaT-gs~DgtIrvWDl~t--~~~-~l~~~~gh~------~ 641 (695)
++.|++||+. +++... .+..+ ...+..++|+|+|++|++ +..++.|++||++. +.. .+..+.... .
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 8999999998 554332 22222 346788999999996655 56688999999874 332 123333332 3
Q ss_pred CeEEEEEecCCCeEEEEEeCCCcEEEEECC---CCeEEEEEecCCCcEEEEEEeCCC
Q 005473 642 TVMSLDFHPSKEDLLCSCDNNSEIRYWSIN---NGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 642 ~V~sl~fspdg~~llaSgs~Dg~IriWDl~---tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.+..++|+|||+.+++++..++.|.+||+. +.+.+..+..+...+..|+| +|+
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~-spd 296 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDL-DPT 296 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEE-CTT
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEE-CCC
Confidence 488999999999888888889999999997 33566777777777899999 986
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.45 E-value=5.9e-13 Score=155.21 Aligned_cols=177 Identities=8% Similarity=0.004 Sum_probs=131.5
Q ss_pred ceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEE
Q 005473 482 KSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESC 561 (695)
Q Consensus 482 ~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v 561 (695)
+..+.|+||+ ++++.++. +.|.+|+...+... .+..+..|...|.++
T Consensus 111 v~~~~~SpDg---------------~~l~~~~~-~~i~~~d~~~~~~~-----------------~~~~l~~~~~~~~~~ 157 (741)
T 2ecf_A 111 IVDYQWSPDA---------------QRLLFPLG-GELYLYDLKQEGKA-----------------AVRQLTHGEGFATDA 157 (741)
T ss_dssp SCCCEECTTS---------------SEEEEEET-TEEEEEESSSCSTT-----------------SCCBCCCSSSCEEEE
T ss_pred cceeEECCCC---------------CEEEEEeC-CcEEEEECCCCCcc-----------------eEEEcccCCcccccc
Confidence 4456777776 56666665 88999976433100 112344566779999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCC----------------eEEEEEcCCCCEEEEEeCCC------
Q 005473 562 HFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQW----------------ITDVRFSPSLSRLATSSADR------ 619 (695)
Q Consensus 562 ~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~----------------V~~v~~spdg~~LaTgs~Dg------ 619 (695)
+|+|||++|++++ ++.|++||+.+++.......+... +.+++|+|||++|++++.|+
T Consensus 158 ~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~ 236 (741)
T 2ecf_A 158 KLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQ 236 (741)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEE
T ss_pred cCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceE
Confidence 9999999999988 568999999998877655444432 47899999999999987765
Q ss_pred ---------------------------eEEEEECCC-CCeeEEEEe--cCCCCeEEEEEecCCCeEEEEEe----CCCcE
Q 005473 620 ---------------------------TVRVWDTEN-PDYSLRTFT--GHSTTVMSLDFHPSKEDLLCSCD----NNSEI 665 (695)
Q Consensus 620 ---------------------------tIrvWDl~t-~~~~l~~~~--gh~~~V~sl~fspdg~~llaSgs----~Dg~I 665 (695)
.|++||+.+ ++. ..... .|...+.+++| |||+.+++++. .+..|
T Consensus 237 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 237 KRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT-QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp EEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC-EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEE
T ss_pred ecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce-EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEE
Confidence 899999987 664 33332 47778999999 99997776654 36789
Q ss_pred EEEECCCCeEEEEEecCCC----cEEEEEEeCCC
Q 005473 666 RYWSINNGSCAGVFKNFFE----SFVSVRVVQPR 695 (695)
Q Consensus 666 riWDl~tg~~v~~~~~h~~----~VtsVaf~sPd 695 (695)
++||+.++++...+..|.. .+.+++| +||
T Consensus 315 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-spd 347 (741)
T 2ecf_A 315 VEVTLASNQQRVLAHETSPTWVPLHNSLRF-LDD 347 (741)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCSCCEE-CTT
T ss_pred EEEECCCCceEEEEEcCCCCcCCcCCceEE-CCC
Confidence 9999999998888876653 4568899 886
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.44 E-value=1.9e-12 Score=150.95 Aligned_cols=193 Identities=14% Similarity=0.029 Sum_probs=128.0
Q ss_pred CCCceEEEEecCCCccccccCCccCCCCcEEEEeeC-CC-----cEEEEeCCCCCCCCCccccccc------cCCCceee
Q 005473 479 ASSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSL-DD-----NVESFLSPDDADPRDRVGRSAE------VGKGFTFT 546 (695)
Q Consensus 479 s~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~-D~-----~V~lw~~~~~~~~~~~~~~~~d------~~~~~~~~ 546 (695)
......+.|++|| +++++++. |+ .|.+|+...+............ ........
T Consensus 36 ~~~~~~~~~SpdG---------------~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (741)
T 2ecf_A 36 GPTLMKPKVAPDG---------------SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARR 100 (741)
T ss_dssp CCCCEEEEECTTS---------------SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------
T ss_pred CCCCCCceEecCC---------------CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhh
Confidence 3467788999988 66777777 77 8999977544211000000000 00000000
Q ss_pred eEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--EEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 005473 547 EFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFT--VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVW 624 (695)
Q Consensus 547 ~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~--~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvW 624 (695)
+...+. ....|.+++|+|||++|++++. +.|++||+.++. .+..+..|...+.+++|+|||++|++++ ++.|++|
T Consensus 101 ~~~~~~-~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~ 177 (741)
T 2ecf_A 101 ERQRIA-AMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVI 177 (741)
T ss_dssp -------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEE
T ss_pred hhhhhc-cccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEE
Confidence 000000 0134789999999999999886 999999999873 3446777888999999999999999987 5699999
Q ss_pred ECCCCCeeEEEEecCCCC----------------eEEEEEecCCCeEEEEEeCCC-------------------------
Q 005473 625 DTENPDYSLRTFTGHSTT----------------VMSLDFHPSKEDLLCSCDNNS------------------------- 663 (695)
Q Consensus 625 Dl~t~~~~l~~~~gh~~~----------------V~sl~fspdg~~llaSgs~Dg------------------------- 663 (695)
|+.++.. ......+... +.+++|+|||+.|++++ .|+
T Consensus 178 d~~~g~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~-~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 178 DLASGRQ-MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR-IDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp ETTTTEE-EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE-EECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred ecCCCCE-EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE-EcCCCCceEecCCCCCCcccceEeecCC
Confidence 9987553 3333333322 47899999999766544 343
Q ss_pred --------cEEEEECCC-CeEEEEEe--cCCCcEEEEEE
Q 005473 664 --------EIRYWSINN-GSCAGVFK--NFFESFVSVRV 691 (695)
Q Consensus 664 --------~IriWDl~t-g~~v~~~~--~h~~~VtsVaf 691 (695)
.|++||+.+ +++..... .|...|.+++|
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW 294 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe
Confidence 789999998 87665543 36677777777
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.43 E-value=1.1e-12 Score=152.25 Aligned_cols=141 Identities=12% Similarity=0.097 Sum_probs=107.5
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCe------------------EEEEEcCCCCEEE
Q 005473 552 PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWI------------------TDVRFSPSLSRLA 613 (695)
Q Consensus 552 ~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V------------------~~v~~spdg~~La 613 (695)
.+|...|.+++|||||++|+.++. +.|++||+.+++.......+...+ .+++|+|||++|+
T Consensus 110 ~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la 188 (723)
T 1xfd_A 110 EVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA 188 (723)
T ss_dssp TCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE
T ss_pred ccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE
Confidence 356666899999999999999885 789999999988776665544333 7899999999999
Q ss_pred EEeCCC----------------------------------eEEEEECCCCCeeEEEEecC------CCCeEEEEEecCCC
Q 005473 614 TSSADR----------------------------------TVRVWDTENPDYSLRTFTGH------STTVMSLDFHPSKE 653 (695)
Q Consensus 614 Tgs~Dg----------------------------------tIrvWDl~t~~~~l~~~~gh------~~~V~sl~fspdg~ 653 (695)
+++.|+ .|++||+.++.. ...+..+ ...|.+++|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccceeEEEEEeCCCe
Confidence 987553 799999988653 4555544 56789999999998
Q ss_pred eEEEEEe---CCCcEEEEECCCCeEEEEEecC-CCcEE----EEEEeCCC
Q 005473 654 DLLCSCD---NNSEIRYWSINNGSCAGVFKNF-FESFV----SVRVVQPR 695 (695)
Q Consensus 654 ~llaSgs---~Dg~IriWDl~tg~~v~~~~~h-~~~Vt----sVaf~sPd 695 (695)
.+++... .+..|++||+.++++...+..+ ...|. +++| +||
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~-spd 316 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF-SKD 316 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE-CTT
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceE-cCC
Confidence 5543333 2368999999999988776543 34443 7889 886
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.42 E-value=2.1e-11 Score=129.42 Aligned_cols=187 Identities=16% Similarity=0.171 Sum_probs=124.6
Q ss_pred ceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceee--eEEEecCCCCCeE
Q 005473 482 KSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFT--EFQLIPASTSKVE 559 (695)
Q Consensus 482 ~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~--~v~~l~~H~~~V~ 559 (695)
...+.|+|++. .+++++..++.|.+|........... +..... .......+...+.
T Consensus 157 ~~~~~~spdg~--------------~l~~~~~~~~~v~v~~~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~ 214 (361)
T 3scy_A 157 LHCVRITPDGK--------------YLLADDLGTDQIHKFNINPNANADNK--------EKFLTKGTPEAFKVAPGSGPR 214 (361)
T ss_dssp EEEEEECTTSS--------------EEEEEETTTTEEEEEEECTTCCTTTC--------CCCEEEEEEEEEECCTTCCEE
T ss_pred ceEEEECCCCC--------------EEEEEeCCCCEEEEEEEcCCCCcccc--------cceeecccccceecCCCCCCe
Confidence 45678888774 34555556889999966433110000 000000 0111123344578
Q ss_pred EEEEcCCCCEEEEEe-CCCcEEEEECCCCeEE--EEe---cccCCCeEEEEEcCCCCEEEEEeCC--CeEEEEECC--CC
Q 005473 560 SCHFSPDGKLLATGG-HDKKAVLWCTESFTVK--STL---EEHTQWITDVRFSPSLSRLATSSAD--RTVRVWDTE--NP 629 (695)
Q Consensus 560 ~v~fspdg~~LaSgs-~Dg~V~IWDl~t~~~~--~~l---~~H~~~V~~v~~spdg~~LaTgs~D--gtIrvWDl~--t~ 629 (695)
+++|+|||++|++++ .++.|.+||+.+++.. ..+ ..+...+.+++|+|++++|++++.+ +.|.+|+++ ++
T Consensus 215 ~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 215 HLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG 294 (361)
T ss_dssp EEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC
T ss_pred EEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC
Confidence 999999999888777 5899999999877542 222 2334557899999999998776654 899999996 33
Q ss_pred Ce-eEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEEC--CCCeEEEEEe-cCCCcEEEEEE
Q 005473 630 DY-SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSI--NNGSCAGVFK-NFFESFVSVRV 691 (695)
Q Consensus 630 ~~-~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl--~tg~~v~~~~-~h~~~VtsVaf 691 (695)
.. .+..+.. ...+.+++|+|+|+++++++..++.|.+|++ .+++...... .+...++||+|
T Consensus 295 ~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 295 TLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF 359 (361)
T ss_dssp CEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred cEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence 32 2334443 4578899999999977777768899999655 5676655542 45567899999
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.42 E-value=1.3e-11 Score=130.00 Aligned_cols=149 Identities=14% Similarity=0.161 Sum_probs=106.3
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECC-CC--eEEEEecc---------cCCCeEEEEEcCCCCEE
Q 005473 546 TEFQLIPASTSKVESCHFSPDGKLLATGG-HDKKAVLWCTE-SF--TVKSTLEE---------HTQWITDVRFSPSLSRL 612 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl~-t~--~~~~~l~~---------H~~~V~~v~~spdg~~L 612 (695)
+.+..+..+...+.+++|+|||++|++++ .++.|.+||+. ++ ..+..+.. +...+.+++|+|+++++
T Consensus 76 ~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~ 155 (347)
T 3hfq_A 76 HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLA 155 (347)
T ss_dssp EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEE
T ss_pred EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEE
Confidence 34445455677789999999999998888 68999999996 22 33333321 12348899999999966
Q ss_pred EEEeCCCeEEEEECC-CCCee-EEEEecC-CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC--CeE--EEEEecCC--
Q 005473 613 ATSSADRTVRVWDTE-NPDYS-LRTFTGH-STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN--GSC--AGVFKNFF-- 683 (695)
Q Consensus 613 aTgs~DgtIrvWDl~-t~~~~-l~~~~gh-~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t--g~~--v~~~~~h~-- 683 (695)
++...++.|++||+. ++... +..+..+ ...+..++|+|||+.+++++..++.|++|++.. ++. +..+....
T Consensus 156 v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 235 (347)
T 3hfq_A 156 VIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD 235 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT
T ss_pred EEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC
Confidence 666778999999998 43321 2222332 336889999999998888888899999999874 543 33443332
Q ss_pred ----CcEEEEEEeCCC
Q 005473 684 ----ESFVSVRVVQPR 695 (695)
Q Consensus 684 ----~~VtsVaf~sPd 695 (695)
..+..++| +||
T Consensus 236 ~~~~~~~~~i~~-spd 250 (347)
T 3hfq_A 236 YTAHNGAAAIRL-SHD 250 (347)
T ss_dssp CCSCCEEEEEEE-CTT
T ss_pred CCCCCcceeEEE-CCC
Confidence 35788999 986
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.42 E-value=1.7e-12 Score=150.66 Aligned_cols=183 Identities=13% Similarity=0.146 Sum_probs=127.6
Q ss_pred CCcEEEEeeCCCcEEEEeCCC-----CCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEe-----
Q 005473 505 MDRFVDDGSLDDNVESFLSPD-----DADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGG----- 574 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~-----~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs----- 574 (695)
..++++.+ .|++|.+|+... +...............+. ...+.+...+.++.|+|||++|++++
T Consensus 131 dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~-----~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 131 VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ-----AVHQREFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS-----CCGGGCTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEccc-----chhhhhcCCCceEEECCCCCEEEEEEECCCC
Confidence 34667774 689999998754 221100000000000000 01223344578999999999999987
Q ss_pred ----------------------------CCCcEEEEECCCCeEEEEec--ccCCCeEEEEEcCCCCEEEEEeCCC-----
Q 005473 575 ----------------------------HDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSADR----- 619 (695)
Q Consensus 575 ----------------------------~Dg~V~IWDl~t~~~~~~l~--~H~~~V~~v~~spdg~~LaTgs~Dg----- 619 (695)
.+..|++||+.+++...... .|...|.+++|+||+++|++++.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 44679999999988765442 5678899999999999999887776
Q ss_pred eEEEEECCCCCeeEEEEe-cCCC---CeEEEEEec--CCCeEEEEEeCCCcEEEEECC-CCeEEEEEecCCCcEEE-EEE
Q 005473 620 TVRVWDTENPDYSLRTFT-GHST---TVMSLDFHP--SKEDLLCSCDNNSEIRYWSIN-NGSCAGVFKNFFESFVS-VRV 691 (695)
Q Consensus 620 tIrvWDl~t~~~~l~~~~-gh~~---~V~sl~fsp--dg~~llaSgs~Dg~IriWDl~-tg~~v~~~~~h~~~Vts-Vaf 691 (695)
.|++||+.++........ .+.. .+.++.|+| ||+ ++++++.|+.++||+++ ++..+..+..|...|.+ ++|
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~ 363 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGF 363 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEE
T ss_pred EEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEE
Confidence 899999998743222222 2222 246789999 987 67788889999999987 67888888888888887 789
Q ss_pred eCCC
Q 005473 692 VQPR 695 (695)
Q Consensus 692 ~sPd 695 (695)
+|+
T Consensus 364 -spd 366 (706)
T 2z3z_A 364 -DPK 366 (706)
T ss_dssp -CTT
T ss_pred -cCC
Confidence 885
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.42 E-value=2.6e-13 Score=157.97 Aligned_cols=164 Identities=13% Similarity=0.138 Sum_probs=116.6
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC---CeEEEEEcCCCCEEEEEeC--------
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS---KVESCHFSPDGKLLATGGH-------- 575 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~---~V~~v~fspdg~~LaSgs~-------- 575 (695)
.+++++ .|++|++|+...+. ....+.+|.. .|.+++|||||++|++++.
T Consensus 28 ~~~~~~-~d~~i~~~~~~~g~-------------------~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s 87 (719)
T 1z68_A 28 EYLHQS-ADNNIVLYNIETGQ-------------------SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYS 87 (719)
T ss_dssp EEEEEC-TTSCEEEEESSSCC-------------------EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSC
T ss_pred eEEEEc-CCCCEEEEEcCCCc-------------------EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEee
Confidence 455554 58999999764431 1222223322 4889999999999998876
Q ss_pred -CCcEEEEECCCCeEE--EEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCe---------
Q 005473 576 -DKKAVLWCTESFTVK--STLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTV--------- 643 (695)
Q Consensus 576 -Dg~V~IWDl~t~~~~--~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V--------- 643 (695)
|+.|+|||+.+++++ ..+ ...+.+++|+|||+.|+++. |+.|++||+.++.....+..++...|
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 88 YTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp EEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred cceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 789999999998873 122 35688999999999999986 78999999987664211223333222
Q ss_pred --------EEEEEecCCCeEEEEEeCCC---------------------------------cEEEEECCCCeEE------
Q 005473 644 --------MSLDFHPSKEDLLCSCDNNS---------------------------------EIRYWSINNGSCA------ 676 (695)
Q Consensus 644 --------~sl~fspdg~~llaSgs~Dg---------------------------------~IriWDl~tg~~v------ 676 (695)
.+++|+|||+.|++++..++ .|++||+.+++++
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 243 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP 243 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc
Confidence 48999999996664443322 7899999988753
Q ss_pred --EEEecCCCcEEEEEEeCCC
Q 005473 677 --GVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 677 --~~~~~h~~~VtsVaf~sPd 695 (695)
..+.+|...|.+++| +||
T Consensus 244 ~~~~~~~~~~~~~~~~~-SpD 263 (719)
T 1z68_A 244 VPAMIASSDYYFSWLTW-VTD 263 (719)
T ss_dssp CCHHHHTSCEEEEEEEE-SSS
T ss_pred CCccCCCCcceEEEeEE-eCC
Confidence 123468888999999 996
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.42 E-value=9.3e-12 Score=128.92 Aligned_cols=161 Identities=16% Similarity=0.164 Sum_probs=117.5
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecC-----CCCCeEEEEEcCCCCEEEEEe-------
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPA-----STSKVESCHFSPDGKLLATGG------- 574 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~-----H~~~V~~v~fspdg~~LaSgs------- 574 (695)
.++++++.++.|.+|+...+. .+..+.. |...+.+++|+|+|++|++++
T Consensus 47 ~l~v~~~~~~~v~~~d~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 47 IAYATVNKSESLVKIDLVTGE-------------------TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107 (337)
T ss_dssp EEEEEETTTTEEEEEETTTCC-------------------EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred EEEEEeCCCCeEEEEECCCCC-------------------eEeeEEcCCcccccccccceEECCCCCEEEEEeccccccc
Confidence 455666778899999664331 1111111 122467899999999998886
Q ss_pred -----CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEec-----------
Q 005473 575 -----HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTG----------- 638 (695)
Q Consensus 575 -----~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~g----------- 638 (695)
.++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|++||+.+++. +..+..
T Consensus 108 ~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~s~ 183 (337)
T 1pby_B 108 THFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTL-VEDKPIQSWEAETYAQP 183 (337)
T ss_dssp SCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEE-EEEECSTTTTTTTBCCC
T ss_pred ccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcE-eeeeeccccCCCceeCC
Confidence 579999999999988877764 4568899999999988887 68899999987543 222221
Q ss_pred -------------------------------------------------------CCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 639 -------------------------------------------------------HSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 639 -------------------------------------------------------h~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
+...+.+++|+|+++.++++ ++
T Consensus 184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~ 260 (337)
T 1pby_B 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YN 260 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ES
T ss_pred CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CC
Confidence 12234568999999865544 68
Q ss_pred cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 664 EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.|++||+.+++.+..+..+ ..+.+++| +|+
T Consensus 261 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~-s~d 290 (337)
T 1pby_B 261 VLESFDLEKNASIKRVPLP-HSYYSVNV-STD 290 (337)
T ss_dssp EEEEEETTTTEEEEEEECS-SCCCEEEE-CTT
T ss_pred eEEEEECCCCcCcceecCC-CceeeEEE-CCC
Confidence 9999999999998888754 45688999 885
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.41 E-value=2.3e-12 Score=146.45 Aligned_cols=124 Identities=13% Similarity=0.037 Sum_probs=106.4
Q ss_pred EEEEEcCCCCEEEEEeCC----CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCC--eEEEEECCCCCee
Q 005473 559 ESCHFSPDGKLLATGGHD----KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADR--TVRVWDTENPDYS 632 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~D----g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~Dg--tIrvWDl~t~~~~ 632 (695)
.+++|+|||++|++++.| +.|++||+.+++.. .+..|.+.+..++|+|||++|+++..++ .|++||+.++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~- 230 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV- 230 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE-
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE-
Confidence 789999999999988877 78999999888765 6788899999999999999999888888 899999998765
Q ss_pred EEEEecCCCCeEEEE--------EecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEE
Q 005473 633 LRTFTGHSTTVMSLD--------FHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 633 l~~~~gh~~~V~sl~--------fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf 691 (695)
. .+.+|...|.+++ |+||| .++++++.|+.+++|++ |+++. .+.+.|.+++|
T Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~ 290 (582)
T 3o4h_A 231 E-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GERVE---APQGNHGRVVL 290 (582)
T ss_dssp E-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEE
T ss_pred E-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEe
Confidence 4 7778877777777 99999 68889999999999999 76655 34467778887
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.40 E-value=6.8e-12 Score=129.93 Aligned_cols=153 Identities=12% Similarity=0.083 Sum_probs=116.0
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEec-CCCC-CeEEEEEcCCCCEEE-EEeCCCcEEEEE
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIP-ASTS-KVESCHFSPDGKLLA-TGGHDKKAVLWC 583 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~-~H~~-~V~~v~fspdg~~La-Sgs~Dg~V~IWD 583 (695)
.++++++.++.|.+|+...+ ..+..+. ++.. .+.+++|+|+|++++ ++..++.|++||
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-------------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 62 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-------------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-------------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cEEEEcCCCCeEEEEECCCC-------------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEE
Confidence 57899999999999965432 2223333 2221 478999999998665 555678999999
Q ss_pred CCCCeEEEEecc-c----CCCeEEEEEcCCCCEEEEEe------------CCCeEEEEECCCCCeeEEEEecCCCCeEEE
Q 005473 584 TESFTVKSTLEE-H----TQWITDVRFSPSLSRLATSS------------ADRTVRVWDTENPDYSLRTFTGHSTTVMSL 646 (695)
Q Consensus 584 l~t~~~~~~l~~-H----~~~V~~v~~spdg~~LaTgs------------~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl 646 (695)
+.+++.+..+.. + ...+.+++|+|++++|++++ .++.|++||+.+++. +..+.. ...+.++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~~~~~ 140 (337)
T 1pby_B 63 LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR-RKAFEA-PRQITML 140 (337)
T ss_dssp TTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE-EEEEEC-CSSCCCE
T ss_pred CCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE-EEEEeC-CCCccee
Confidence 999988876653 2 22678899999999998886 579999999987654 555553 4568889
Q ss_pred EEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCC
Q 005473 647 DFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFF 683 (695)
Q Consensus 647 ~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~ 683 (695)
+|+|+++.++++ ++.|++||+.+++.+..+..+.
T Consensus 141 ~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~ 174 (337)
T 1pby_B 141 AWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQS 174 (337)
T ss_dssp EECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTT
T ss_pred EECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccc
Confidence 999999976655 6889999999999988887544
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.39 E-value=5.7e-12 Score=146.19 Aligned_cols=140 Identities=16% Similarity=0.185 Sum_probs=109.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC-eEEEEecc-cCC---CeEEEEEcC--CCCEEEEEeCCCe
Q 005473 553 ASTSKVESCHFSPDGKLLATGGHDK-----KAVLWCTESF-TVKSTLEE-HTQ---WITDVRFSP--SLSRLATSSADRT 620 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~LaSgs~Dg-----~V~IWDl~t~-~~~~~l~~-H~~---~V~~v~~sp--dg~~LaTgs~Dgt 620 (695)
.|...|.+++|+|||++|++++.|+ .|++||+.++ .....+.. +.. .+.+++|+| ++++|++++.|+.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 5677899999999999999988776 8999999998 44333322 222 246789999 9999999999999
Q ss_pred EEEEECCCCCeeEEEEecCCCCeEE-EEEecCCCeEEEEEeCCC----cEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 621 VRVWDTENPDYSLRTFTGHSTTVMS-LDFHPSKEDLLCSCDNNS----EIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 621 IrvWDl~t~~~~l~~~~gh~~~V~s-l~fspdg~~llaSgs~Dg----~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++||+++.....+..+..|...|.+ ++|+|+++.++++++.++ .|+.||+.+++ +..+. |...|.+++| +||
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~-spd 411 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQL-SPD 411 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEE-CTT
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEE-CCC
Confidence 9999887333347778888777877 799999998888888776 77778887765 44443 6677899999 986
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.34 E-value=7e-11 Score=125.29 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=101.1
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCe-------E------EEEecccCCCeEEEEEcCCCCEEEEEe-CCC
Q 005473 555 TSKVESCHFSPDGKLLATGG-HDKKAVLWCTESFT-------V------KSTLEEHTQWITDVRFSPSLSRLATSS-ADR 619 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl~t~~-------~------~~~l~~H~~~V~~v~~spdg~~LaTgs-~Dg 619 (695)
...+.+++|+|+|++|++++ .++.|++|++.... . ......+...+.+++|+|++++|++++ .++
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 34578999999999776665 48899999887533 1 112233456688999999999887777 689
Q ss_pred eEEEEECCCCCe-eEEEE---ecCCCCeEEEEEecCCCeEEEEEeC-CCcEEEEECC--CCe--EEEEEecCCCcEEEEE
Q 005473 620 TVRVWDTENPDY-SLRTF---TGHSTTVMSLDFHPSKEDLLCSCDN-NSEIRYWSIN--NGS--CAGVFKNFFESFVSVR 690 (695)
Q Consensus 620 tIrvWDl~t~~~-~l~~~---~gh~~~V~sl~fspdg~~llaSgs~-Dg~IriWDl~--tg~--~v~~~~~h~~~VtsVa 690 (695)
.|++||++++.. .+..+ ..+...+.+++|+|||+.+++++.. ++.|.+|++. +++ .+..+.. ...+.+++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEE
Confidence 999999986542 12222 2333557899999999977777766 7899999996 454 4555555 45678999
Q ss_pred EeCCC
Q 005473 691 VVQPR 695 (695)
Q Consensus 691 f~sPd 695 (695)
| +|+
T Consensus 313 ~-spd 316 (361)
T 3scy_A 313 I-TPN 316 (361)
T ss_dssp E-CTT
T ss_pred E-CCC
Confidence 9 986
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.34 E-value=1.6e-11 Score=139.61 Aligned_cols=129 Identities=10% Similarity=0.039 Sum_probs=103.1
Q ss_pred eEEEEEcCCCC--EEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC----CeEEEEECCCCCe
Q 005473 558 VESCHFSPDGK--LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD----RTVRVWDTENPDY 631 (695)
Q Consensus 558 V~~v~fspdg~--~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D----gtIrvWDl~t~~~ 631 (695)
+...+|+|||+ ++++++. +.+.|||+.++++......+. .+++|+|||++|++++.| +.|++||+.++..
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp BEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred ceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 45678888886 3444444 445699999988765554333 799999999999988777 7899999988664
Q ss_pred eEEEEecCCCCeEEEEEecCCCeEEEEEeCCC--cEEEEECCCCeEEEEEecCCCcEEEEE--------EeCCC
Q 005473 632 SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS--EIRYWSINNGSCAGVFKNFFESFVSVR--------VVQPR 695 (695)
Q Consensus 632 ~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg--~IriWDl~tg~~v~~~~~h~~~VtsVa--------f~sPd 695 (695)
..+.+|.+.+.+++|+|||+.|+ +++.++ .|++||+.++++. .+.+|...|..++ | +||
T Consensus 188 --~~l~~~~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-spd 256 (582)
T 3o4h_A 188 --RVFDSGEGSFSSASISPGMKVTA-GLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY-LPD 256 (582)
T ss_dssp --EEECCSSCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE-CTT
T ss_pred --eEeecCCCccccceECCCCCEEE-EccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE-cCC
Confidence 57788989999999999999655 777888 8999999999888 7778887777777 8 886
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.33 E-value=6.7e-11 Score=123.27 Aligned_cols=129 Identities=12% Similarity=0.094 Sum_probs=95.8
Q ss_pred CeEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCe---EEEEecccCCCeEEEEEcCCCCEEEEEeCCCeE
Q 005473 557 KVESCHFSPDGKLLATGGHD------------KKAVLWCTESFT---VKSTLEEHTQWITDVRFSPSLSRLATSSADRTV 621 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~D------------g~V~IWDl~t~~---~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtI 621 (695)
.+.+++|+|+|++|++++.+ +.|.+||+.+++ .+..+.. ...+.+++|+|+++ +++++. .|
T Consensus 93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i 168 (349)
T 1jmx_B 93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DI 168 (349)
T ss_dssp CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SE
T ss_pred cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEccC--cE
Confidence 37889999999999998865 899999998743 3344443 44688999999999 555543 49
Q ss_pred EEEECCCCCeeEEEEecCC-------------------------------------------------------------
Q 005473 622 RVWDTENPDYSLRTFTGHS------------------------------------------------------------- 640 (695)
Q Consensus 622 rvWDl~t~~~~l~~~~gh~------------------------------------------------------------- 640 (695)
++||+.+++. +..+..+.
T Consensus 169 ~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (349)
T 1jmx_B 169 YKMDVKTGKY-TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT 247 (349)
T ss_dssp EEECTTTCCE-EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE
T ss_pred EEEeCCCCce-eccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe
Confidence 9999988664 44433221
Q ss_pred -------CCeEEEEEec-CCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 641 -------TTVMSLDFHP-SKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 641 -------~~V~sl~fsp-dg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
..+.+++|+| ++..++ ++ ++.|++||+.+++.+..+..+ ..+.+++| +|+
T Consensus 248 ~~~~~~~~~~~~~~~sp~dg~~l~-~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~-s~d 305 (349)
T 1jmx_B 248 QEFADLTELYFTGLRSPKDPNQIY-GV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAF-DKK 305 (349)
T ss_dssp EEEEECSSCEEEEEECSSCTTEEE-EE--ESEEEEEETTTTEEEEEEECS-SCCCEEEE-CSS
T ss_pred cccccCCCcceeeEecCCCCCEEE-EE--cCeEEEEECccCeEEEEEcCC-CCccceEE-CCC
Confidence 1345677889 988655 44 789999999999998888744 34678999 885
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.32 E-value=6.4e-11 Score=123.41 Aligned_cols=154 Identities=11% Similarity=0.075 Sum_probs=113.9
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC-CCeEEEEEcCCCCEEE-EEeCCCcEEEE
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST-SKVESCHFSPDGKLLA-TGGHDKKAVLW 582 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~-~~V~~v~fspdg~~La-Sgs~Dg~V~IW 582 (695)
...++++++.++.|.+|+...+ ..+..+..+. ..+.+++|+|+|++++ ++..++.|.+|
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~-------------------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~ 70 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASD-------------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 70 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTT-------------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCC-------------------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEE
Confidence 3478899999999999966432 2223333332 2478999999999665 45568999999
Q ss_pred ECCCCeEEEEecccC------CCeEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCCe--eEEEEecCCCC
Q 005473 583 CTESFTVKSTLEEHT------QWITDVRFSPSLSRLATSSAD------------RTVRVWDTENPDY--SLRTFTGHSTT 642 (695)
Q Consensus 583 Dl~t~~~~~~l~~H~------~~V~~v~~spdg~~LaTgs~D------------gtIrvWDl~t~~~--~l~~~~gh~~~ 642 (695)
|+.+++.+..+..+. ..+.+++|+|++++|++++.+ +.|++||+.+++. .+..+.. ...
T Consensus 71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~ 149 (349)
T 1jmx_B 71 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQ 149 (349)
T ss_dssp ETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSS
T ss_pred eCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCc
Confidence 999999887775332 337899999999999988865 8999999987432 2344443 346
Q ss_pred eEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 643 VMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 643 V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
+.+++|+|+|+ +++ ++ +.|++||+.+++.+..+..+
T Consensus 150 ~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 150 VYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp CCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECST
T ss_pred ccceeECCCCc-EEE-cc--CcEEEEeCCCCceecccccc
Confidence 89999999998 665 43 34999999999988877643
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.31 E-value=2.5e-11 Score=142.63 Aligned_cols=174 Identities=16% Similarity=0.088 Sum_probs=123.7
Q ss_pred eEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCC-----C
Q 005473 483 SLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTS-----K 557 (695)
Q Consensus 483 s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~-----~ 557 (695)
..+.|.+++ .+++++ |++|++|+...+. +...+.+|.. .
T Consensus 20 ~~~~w~~dg---------------~~~~~~--~~~i~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ 63 (740)
T 4a5s_A 20 YSLRWISDH---------------EYLYKQ--ENNILVFNAEYGN-------------------SSVFLENSTFDEFGHS 63 (740)
T ss_dssp CCEEECSSS---------------EEEEEE--TTEEEEEETTTCC-------------------EEEEECTTTTTTCCSC
T ss_pred cccEECCCC---------------cEEEEc--CCcEEEEECCCCc-------------------eEEEEechhhhhhccc
Confidence 356777776 567775 8999999765442 1223444432 2
Q ss_pred eEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 005473 558 VESCHFSPDGKLLATGGHD---------KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN 628 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~D---------g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t 628 (695)
...+.|||||++|+.++.+ +.+.|||+.++++. .+..|.+.+..++|||||+.||.+. |+.|++||+.+
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~ 141 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPN 141 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred ccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCC
Confidence 3458999999999999876 55679999998865 4677888999999999999999885 78999999987
Q ss_pred CCeeEEEEecCCCCe-----------------EEEEEecCCCeEEEEEeCCC----------------------------
Q 005473 629 PDYSLRTFTGHSTTV-----------------MSLDFHPSKEDLLCSCDNNS---------------------------- 663 (695)
Q Consensus 629 ~~~~l~~~~gh~~~V-----------------~sl~fspdg~~llaSgs~Dg---------------------------- 663 (695)
+.....+..++...+ .++.|+|||+.|++....++
T Consensus 142 ~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~ 221 (740)
T 4a5s_A 142 LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA 221 (740)
T ss_dssp SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred CceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence 664222233333322 35899999997665543222
Q ss_pred -------cEEEEECCC---Ce--EEEEEe------cCCCcEEEEEEeCCC
Q 005473 664 -------EIRYWSINN---GS--CAGVFK------NFFESFVSVRVVQPR 695 (695)
Q Consensus 664 -------~IriWDl~t---g~--~v~~~~------~h~~~VtsVaf~sPd 695 (695)
.|++||+.+ ++ ....+. +|...|..++| +||
T Consensus 222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w-spd 270 (740)
T 4a5s_A 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTW-ATQ 270 (740)
T ss_dssp TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEE-EET
T ss_pred cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEE-eCC
Confidence 588899988 73 223333 37788999999 886
No 160
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.31 E-value=3.5e-11 Score=146.88 Aligned_cols=119 Identities=13% Similarity=0.048 Sum_probs=101.5
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCC----------
Q 005473 550 LIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADR---------- 619 (695)
Q Consensus 550 ~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~Dg---------- 619 (695)
.+.+|...|.+++|+|||++|++++.|+.|++||+.+++....+.+|.+.|.+++|+|||++|++++.++
T Consensus 373 ~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 373 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCC
Confidence 3447778899999999999999999999999999999998888878999999999999999998887654
Q ss_pred eEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC
Q 005473 620 TVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 620 tIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~ 671 (695)
.|++||+.++. +..+..|...+.+++|+|||+.++ +++.++.+++|+..
T Consensus 453 ~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l~-~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 453 AIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLY-YLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEE-EEESCCCCCEECSS
T ss_pred eEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEEE-EEecccCCcCcchh
Confidence 89999999754 677888888899999999999655 56666666666643
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.27 E-value=2.6e-10 Score=122.03 Aligned_cols=169 Identities=9% Similarity=0.084 Sum_probs=114.0
Q ss_pred cEEEEeeCCCcEEEEeCC-CCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCE--EEEEe---------
Q 005473 507 RFVDDGSLDDNVESFLSP-DDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKL--LATGG--------- 574 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~-~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~--LaSgs--------- 574 (695)
+++++++.+ .|.+|+.. ++ ....+.....+ +.+.+++|+|||++ ++++.
T Consensus 52 ~~l~~~~~~-~v~~~~~~~~g-----------------~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 52 KNIYGAAMK-KWSSFAVKSPT-----------------EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp SEEEEEEBT-EEEEEEEEETT-----------------EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CEEEEEccc-eEEEEEECCCC-----------------CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 667777777 88888653 11 01111111111 23567899999994 55553
Q ss_pred ----CCCcEEEEECC-CCeEEEEec----ccCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECC-CCCee-EEEEe--cCC
Q 005473 575 ----HDKKAVLWCTE-SFTVKSTLE----EHTQWITDVRFSPSLSRLATSSA-DRTVRVWDTE-NPDYS-LRTFT--GHS 640 (695)
Q Consensus 575 ----~Dg~V~IWDl~-t~~~~~~l~----~H~~~V~~v~~spdg~~LaTgs~-DgtIrvWDl~-t~~~~-l~~~~--gh~ 640 (695)
.++.+.+|++. .++....+. .+...+.+++|+|+|++|++++. ++.|++||++ +++.. +..+. .|.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 68999999997 465544443 25678999999999998887764 6799999998 65532 23333 245
Q ss_pred CCeEEEEEecCCCeEEEEEeCCCcEEEEECC--CCeEEE---EEe-------cCCC------cEEEEE-EeCCC
Q 005473 641 TTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN--NGSCAG---VFK-------NFFE------SFVSVR-VVQPR 695 (695)
Q Consensus 641 ~~V~sl~fspdg~~llaSgs~Dg~IriWDl~--tg~~v~---~~~-------~h~~------~VtsVa-f~sPd 695 (695)
..+..++|+|+|+.+++++..++.|.+|+++ +++... .+. +|.. .+..++ | +||
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-spd 265 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL-TFS 265 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE-CTT
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE-CCC
Confidence 6799999999999777666668899999875 565432 222 1222 578999 8 986
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.26 E-value=7.6e-12 Score=145.63 Aligned_cols=137 Identities=13% Similarity=0.034 Sum_probs=102.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cccCCCe-----------------EEEEEcCCCCEEEEEeC
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL-EEHTQWI-----------------TDVRFSPSLSRLATSSA 617 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l-~~H~~~V-----------------~~v~~spdg~~LaTgs~ 617 (695)
..|.+++|||||+.|+.+. |+.|++||+.++++.... .++...| .+++|+|||++|++++.
T Consensus 110 ~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 3588999999999999986 789999999888765433 3333323 48999999999999876
Q ss_pred CC----------------------------------eEEEEECCCCCee--E-----EEEecCCCCeEEEEEecCCCeEE
Q 005473 618 DR----------------------------------TVRVWDTENPDYS--L-----RTFTGHSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 618 Dg----------------------------------tIrvWDl~t~~~~--l-----~~~~gh~~~V~sl~fspdg~~ll 656 (695)
|. .|++||+.++... + ..+.+|...+.+++|+||+. ++
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~ 267 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VC 267 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EE
Confidence 52 7899999876531 1 12346888899999999965 66
Q ss_pred EEEeCC----CcEEEEE----CCCCeEEEEE----ecCCCcEE-----EEEEeCCC
Q 005473 657 CSCDNN----SEIRYWS----INNGSCAGVF----KNFFESFV-----SVRVVQPR 695 (695)
Q Consensus 657 aSgs~D----g~IriWD----l~tg~~v~~~----~~h~~~Vt-----sVaf~sPd 695 (695)
++.... ..|++|| +.++++...+ .+|.+.|. .++| +||
T Consensus 268 ~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-spd 322 (719)
T 1z68_A 268 LQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVF-SYD 322 (719)
T ss_dssp EEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEE-CTT
T ss_pred EEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEE-CCC
Confidence 564422 2489999 8888877665 46777776 7888 885
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.23 E-value=8.5e-10 Score=117.98 Aligned_cols=140 Identities=14% Similarity=0.079 Sum_probs=98.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECC-CCeEE--EEec--ccCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEC
Q 005473 554 STSKVESCHFSPDGKLLATGGH-DKKAVLWCTE-SFTVK--STLE--EHTQWITDVRFSPSLSRLATSSA-DRTVRVWDT 626 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~-Dg~V~IWDl~-t~~~~--~~l~--~H~~~V~~v~~spdg~~LaTgs~-DgtIrvWDl 626 (695)
+...+.+++|+|||++|+++.. ++.|++||+. +++.. ..+. .|...+..++|+|+|++|++++. +++|.+|++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 4567999999999998888764 6899999998 67653 2333 24567999999999999888775 789999987
Q ss_pred C--CCCeeE--EEEe-------cCCC------CeEEEE-EecCCCeEEEEEeCCC-----cEEEEECC-CCeEEE---EE
Q 005473 627 E--NPDYSL--RTFT-------GHST------TVMSLD-FHPSKEDLLCSCDNNS-----EIRYWSIN-NGSCAG---VF 679 (695)
Q Consensus 627 ~--t~~~~l--~~~~-------gh~~------~V~sl~-fspdg~~llaSgs~Dg-----~IriWDl~-tg~~v~---~~ 679 (695)
+ +++... ..+. +|.. .+..++ |+|||+.++++...+. .|++|++. +++... .+
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~ 302 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS 302 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee
Confidence 5 344311 1221 2222 588999 9999997765554333 89999996 566543 23
Q ss_pred ecCCCcEEEEEEeCC
Q 005473 680 KNFFESFVSVRVVQP 694 (695)
Q Consensus 680 ~~h~~~VtsVaf~sP 694 (695)
..+...+..++| +|
T Consensus 303 ~~~~~~~~~~a~-sp 316 (365)
T 1jof_A 303 PTPTSGGHSNAV-SP 316 (365)
T ss_dssp ECSSCCTTCCCE-EE
T ss_pred ecCCCCccccee-cC
Confidence 334445567777 76
No 164
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.20 E-value=2.6e-10 Score=124.39 Aligned_cols=126 Identities=14% Similarity=0.086 Sum_probs=104.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeE
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
+.. |+.|+| |+++|+++ .++.|++||+++......+..|...|.++.+.+. .+++++.||.|.+||+.++.. .
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~-~ 159 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST-K 159 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE-E
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc-c
Confidence 556 999999 99999999 8899999999887766677778888999888764 388889999999999997654 3
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeE--EEEE------e---cCCCcEEEEEEeCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSC--AGVF------K---NFFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~--v~~~------~---~h~~~VtsVaf~sP 694 (695)
. +...|+|++|+|+| ++.|..||.|++|+...+++ ..++ . +|...|.+|.| .+
T Consensus 160 ~----~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~w-l~ 223 (388)
T 1xip_A 160 Q----LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTI-LS 223 (388)
T ss_dssp E----EEESEEEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEE-SS
T ss_pred c----ccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEE-ec
Confidence 2 34589999999998 45788899999999988876 6667 2 47889999999 54
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.19 E-value=3e-10 Score=130.67 Aligned_cols=139 Identities=10% Similarity=0.098 Sum_probs=104.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEECCC------CeEEEEec-ccCCCeEEEEEcCCCCEEEEEe
Q 005473 554 STSKVESCHFSPDGKLLATGGHD----------KKAVLWCTES------FTVKSTLE-EHTQWITDVRFSPSLSRLATSS 616 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~D----------g~V~IWDl~t------~~~~~~l~-~H~~~V~~v~~spdg~~LaTgs 616 (695)
|...+.+++|+|||+.|++++.| ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence 56678999999999999998877 5899999988 554 4555 6667888999999999998877
Q ss_pred CC--------CeEEEEECC-CCC--eeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC--cEEEEECCCCeEEEEEecCC
Q 005473 617 AD--------RTVRVWDTE-NPD--YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS--EIRYWSINNGSCAGVFKNFF 683 (695)
Q Consensus 617 ~D--------gtIrvWDl~-t~~--~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg--~IriWDl~tg~~v~~~~~h~ 683 (695)
.+ ..|++||+. ++. .......+|...+.++.|+|||+ ++++++.|+ .|++||+.++++.....++.
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 285 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREE 285 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSS
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccc
Confidence 54 379999998 451 33444555678899999999999 778888888 66677776776655444333
Q ss_pred Cc--------EEEEEEeCCC
Q 005473 684 ES--------FVSVRVVQPR 695 (695)
Q Consensus 684 ~~--------VtsVaf~sPd 695 (695)
.. +.+++| +|+
T Consensus 286 ~~~~p~w~~~~~~~~~-~~~ 304 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAP-LAN 304 (662)
T ss_dssp BSSCCCCSTTCCSEEE-CTT
T ss_pred cccCccccccCceEeE-eCC
Confidence 22 455666 553
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.19 E-value=3e-10 Score=130.65 Aligned_cols=135 Identities=10% Similarity=0.023 Sum_probs=99.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCC--------cEEEEECC-CC---eEEEEecccCCCeEEEEEcCCCCEEEEEeCCC-
Q 005473 553 ASTSKVESCHFSPDGKLLATGGHDK--------KAVLWCTE-SF---TVKSTLEEHTQWITDVRFSPSLSRLATSSADR- 619 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~LaSgs~Dg--------~V~IWDl~-t~---~~~~~l~~H~~~V~~v~~spdg~~LaTgs~Dg- 619 (695)
.+...+..++|+|||++|+.++.++ .|++||+. ++ +......+|...+..++|+|||+++++++.|+
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSS
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCC
Confidence 4456688899999999999887553 79999998 56 55555556678999999999999888888888
Q ss_pred -eEEEEECCCCCeeEEEEecCCCC--------eEEEEEecCCCeEEEEEeCCCcEEEE--ECCCCeEEEEEecCCCcEEE
Q 005473 620 -TVRVWDTENPDYSLRTFTGHSTT--------VMSLDFHPSKEDLLCSCDNNSEIRYW--SINNGSCAGVFKNFFESFVS 688 (695)
Q Consensus 620 -tIrvWDl~t~~~~l~~~~gh~~~--------V~sl~fspdg~~llaSgs~Dg~IriW--Dl~tg~~v~~~~~h~~~Vts 688 (695)
.|++||+.++.. .....++... +.+++|+|++. ++++++. +.++|| |+.+++ +..+..|.+.|..
T Consensus 265 ~~l~~~~~~~~~~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~ 340 (662)
T 3azo_A 265 WNLHRVDPATGAA-TQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAA 340 (662)
T ss_dssp CEEEEECTTTCCE-EESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEE
T ss_pred eEEEEEECCCCce-eecccccccccCccccccCceEeEeCCCE-EEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEE
Confidence 677777755542 2222222222 56788999877 6778887 999999 555554 6777788777777
Q ss_pred E-EE
Q 005473 689 V-RV 691 (695)
Q Consensus 689 V-af 691 (695)
+ ++
T Consensus 341 ~~s~ 344 (662)
T 3azo_A 341 TLTV 344 (662)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7 55
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.18 E-value=5.7e-09 Score=110.08 Aligned_cols=139 Identities=14% Similarity=0.146 Sum_probs=109.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-EEEEe---------cccCCCeEEEEEcC-CCCEEEEEe-CCCe
Q 005473 553 ASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFT-VKSTL---------EEHTQWITDVRFSP-SLSRLATSS-ADRT 620 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~-~~~~l---------~~H~~~V~~v~~sp-dg~~LaTgs-~Dgt 620 (695)
++......|+++++|+++++...++.|++||..... .+..+ .++-.....|+|+| ++.++++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 444568999999999988888889999999986542 45555 34455789999999 788888886 6999
Q ss_pred EEEEECCCCCeeEEEEecC----------CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe--cCCCcEEE
Q 005473 621 VRVWDTENPDYSLRTFTGH----------STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK--NFFESFVS 688 (695)
Q Consensus 621 IrvWDl~t~~~~l~~~~gh----------~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~--~h~~~Vts 688 (695)
|++||.. +.. +..+... -.....|+|+|++..++++...++.|++||..+|+.+..+. .+...+.+
T Consensus 168 I~~~~~~-g~~-~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~ 245 (329)
T 3fvz_A 168 IVQFSPS-GKF-VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFA 245 (329)
T ss_dssp EEEECTT-SCE-EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEE
T ss_pred EEEEcCC-CCE-EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcce
Confidence 9999954 443 5555422 23489999999966688888899999999999899998885 45677888
Q ss_pred EEEeCC
Q 005473 689 VRVVQP 694 (695)
Q Consensus 689 Vaf~sP 694 (695)
++| +|
T Consensus 246 ~~~-~p 250 (329)
T 3fvz_A 246 ISY-IP 250 (329)
T ss_dssp EEE-ET
T ss_pred eee-cC
Confidence 888 77
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.15 E-value=1.1e-09 Score=116.52 Aligned_cols=140 Identities=9% Similarity=0.049 Sum_probs=103.6
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEE--EcCCCCEEEEE--------------
Q 005473 552 PASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVR--FSPSLSRLATS-------------- 615 (695)
Q Consensus 552 ~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~--~spdg~~LaTg-------------- 615 (695)
.++...+.++.|+|||+.|+.++.++.|++||+.+++....+..+...+.... ++|++.+++..
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 44555555788999999999999999999999999988777776766665444 48999988743
Q ss_pred --------eCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEec-CCCeEEEEEeC-----CCcEEEEECCCCeEEEEEec
Q 005473 616 --------SADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHP-SKEDLLCSCDN-----NSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 616 --------s~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fsp-dg~~llaSgs~-----Dg~IriWDl~tg~~v~~~~~ 681 (695)
..+..|++||+.++. +..+..+...+..+.|+| ||..++++... +..|.+||+..++ +..+..
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~ 233 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKT 233 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCC
T ss_pred hhhhhhccCCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeee
Confidence 234689999999875 345555677899999999 98866655442 3378888877554 444444
Q ss_pred CC--CcEEEEEEeCCC
Q 005473 682 FF--ESFVSVRVVQPR 695 (695)
Q Consensus 682 h~--~~VtsVaf~sPd 695 (695)
+. ..+..++| +||
T Consensus 234 ~~~~~~~~~~~~-spd 248 (388)
T 3pe7_A 234 HAEGESCTHEFW-VPD 248 (388)
T ss_dssp CCTTEEEEEEEE-CTT
T ss_pred CCCCcccccceE-CCC
Confidence 44 35788899 986
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.12 E-value=2.9e-09 Score=114.42 Aligned_cols=87 Identities=15% Similarity=0.255 Sum_probs=69.6
Q ss_pred EEEcCCCCEEEEEeC-----------CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC
Q 005473 603 VRFSPSLSRLATSSA-----------DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 603 v~~spdg~~LaTgs~-----------DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~ 671 (695)
++|+|++++++++.. +.+|.+||+.+.+. +.++..+. +.+++|+|||+.++ +++. +.|.+||..
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~-v~~i~~~~--p~~ia~spdg~~l~-v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR-VARIPGRD--ALSMTIDQQRNLML-TLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE-EEEEECTT--CCEEEEETTTTEEE-EECS-SCEEEEECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE-EEEEecCC--eeEEEECCCCCEEE-EeCC-CeEEEEECC
Confidence 567788777766542 34899999998664 77887776 99999999999555 5554 999999999
Q ss_pred CC--eEEEEEecCCCcEEEEEEeCCC
Q 005473 672 NG--SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 672 tg--~~v~~~~~h~~~VtsVaf~sPd 695 (695)
++ +++..+..+......|+| +|+
T Consensus 334 t~~l~~~~~i~~~G~~P~~~~~-~p~ 358 (361)
T 2oiz_A 334 QPEPKLLRTIEGAAEASLQVQF-HPV 358 (361)
T ss_dssp SSSCEEEEEETTSCSSEEEEEE-CCC
T ss_pred CCcceeeEEeccCCCCcEEEEe-cCC
Confidence 99 999998766667788999 986
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.10 E-value=6.7e-09 Score=109.55 Aligned_cols=175 Identities=13% Similarity=0.196 Sum_probs=121.0
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEEC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSP-DGKLLATGG-HDKKAVLWCT 584 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fsp-dg~~LaSgs-~Dg~V~IWDl 584 (695)
+++++.+.++.|+.|+..........+..... .+ .-.++.....+|+|+| +++++++.+ .++.|++||
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~--~g-------~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ--PG-------SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTB--CC-------CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCC--CC-------CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 57777777888888864322100000000000 00 0023455689999999 788888876 689999999
Q ss_pred CCCeEEEEeccc----------CCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCCeeEEEEe--cCCCCeEEEEEecC
Q 005473 585 ESFTVKSTLEEH----------TQWITDVRFSPS-LSRLATSSADRTVRVWDTENPDYSLRTFT--GHSTTVMSLDFHPS 651 (695)
Q Consensus 585 ~t~~~~~~l~~H----------~~~V~~v~~spd-g~~LaTgs~DgtIrvWDl~t~~~~l~~~~--gh~~~V~sl~fspd 651 (695)
.+++.+..+... -.....|+++|+ +.++++...+++|++||..+++. +..+. .+...+.+++|+|
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~p- 250 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF-VREIKHASFGRNVFAISYIP- 250 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECCTTTTTCEEEEEEET-
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE-EEEEeccccCCCcceeeecC-
Confidence 567777776432 234889999998 66777777899999999997664 66663 4567789999999
Q ss_pred CCeEEEEE-------eCCCcEEEEECCCCeEEEEEe---cCCCcEEEEEEeCCC
Q 005473 652 KEDLLCSC-------DNNSEIRYWSINNGSCAGVFK---NFFESFVSVRVVQPR 695 (695)
Q Consensus 652 g~~llaSg-------s~Dg~IriWDl~tg~~v~~~~---~h~~~VtsVaf~sPd 695 (695)
+ .++++. ..+..|++||+.+++.+..+. ++...+..|+| +|+
T Consensus 251 g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~-~~d 302 (329)
T 3fvz_A 251 G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA-SED 302 (329)
T ss_dssp T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE-CTT
T ss_pred C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE-CCC
Confidence 2 233333 334589999999999999984 67778899999 885
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.09 E-value=1.1e-09 Score=116.56 Aligned_cols=145 Identities=12% Similarity=0.012 Sum_probs=109.8
Q ss_pred eEEEecCCCCCeEE-----EEEcCCCCEEEEEeC-CCc--EEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC
Q 005473 547 EFQLIPASTSKVES-----CHFSPDGKLLATGGH-DKK--AVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD 618 (695)
Q Consensus 547 ~v~~l~~H~~~V~~-----v~fspdg~~LaSgs~-Dg~--V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D 618 (695)
.+..+..|...+.. ++|+|||++|+.++. ++. |++||+.+++......+|...+..++|+|+++.|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 44556666655555 889999999988887 664 8888999998887777777777678899999999999999
Q ss_pred CeEEEEECCCCCeeEEEEecCCCCeEEEE--EecCCCeEEEEE---------------------eCCCcEEEEECCCCeE
Q 005473 619 RTVRVWDTENPDYSLRTFTGHSTTVMSLD--FHPSKEDLLCSC---------------------DNNSEIRYWSINNGSC 675 (695)
Q Consensus 619 gtIrvWDl~t~~~~l~~~~gh~~~V~sl~--fspdg~~llaSg---------------------s~Dg~IriWDl~tg~~ 675 (695)
+.|++||+.+++. ...+..+...+.... ++|++..+++.. +.+..|++||+.+++.
T Consensus 102 ~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 102 RNLMRVDLATLEE-NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TEEEEEETTTCCE-EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcc-eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 9999999998764 445555666564444 488988554321 2347899999999865
Q ss_pred EEEEecCCCcEEEEEEeCC
Q 005473 676 AGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 676 v~~~~~h~~~VtsVaf~sP 694 (695)
.. +..+...+..++| +|
T Consensus 181 ~~-l~~~~~~~~~~~~-sp 197 (388)
T 3pe7_A 181 TV-ILQENQWLGHPIY-RP 197 (388)
T ss_dssp EE-EEEESSCEEEEEE-ET
T ss_pred EE-eecCCccccccEE-CC
Confidence 44 4456677899999 88
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.07 E-value=3.4e-10 Score=132.96 Aligned_cols=115 Identities=17% Similarity=0.103 Sum_probs=94.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCC-----eEEEEEcCCCCEEEEEeCC---------CeEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQW-----ITDVRFSPSLSRLATSSAD---------RTVR 622 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~-----V~~v~~spdg~~LaTgs~D---------gtIr 622 (695)
...++.|+|||++|+++ |++|++||+.++++...+.+|... ..++.|||||++|+.++.+ +.++
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 46689999999999886 999999999999988888877643 2447899999999998876 5567
Q ss_pred EEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEE
Q 005473 623 VWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAG 677 (695)
Q Consensus 623 vWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~ 677 (695)
+||+.++. +..+..|.+.+..++|+|||+.|+ .+ .|+.|++||+.++++..
T Consensus 96 ~~d~~~~~--~~~l~~~~~~~~~~~~SPdG~~la-~~-~~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 96 IYDLNKRQ--LITEERIPNNTQWVTWSPVGHKLA-YV-WNNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EEETTTTE--ECCSSCCCTTEEEEEECSSTTCEE-EE-ETTEEEEESSTTSCCEE
T ss_pred EEECCCCc--EEEcccCCCcceeeEECCCCCEEE-EE-ECCeEEEEECCCCceEE
Confidence 99999865 345677788899999999999665 44 37899999999887654
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.05 E-value=1.9e-08 Score=102.79 Aligned_cols=136 Identities=11% Similarity=0.232 Sum_probs=104.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEec--ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCe
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDY 631 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~--~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~ 631 (695)
+...+.+++++++|+++++...++.|++||.. ++.+..+. ++...+.+|++++++.++++...++.|++||... .
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~- 195 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-Q- 195 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-C-
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-C-
Confidence 44568999999999988887788999999965 55555553 4556789999999998888888899999999854 3
Q ss_pred eEEEEecC--CCCeEEEEEecCCCeEEEEEeCCC-cEEEEECCCCeEEEEEecCCC--cEEEEEEeCCC
Q 005473 632 SLRTFTGH--STTVMSLDFHPSKEDLLCSCDNNS-EIRYWSINNGSCAGVFKNFFE--SFVSVRVVQPR 695 (695)
Q Consensus 632 ~l~~~~gh--~~~V~sl~fspdg~~llaSgs~Dg-~IriWDl~tg~~v~~~~~h~~--~VtsVaf~sPd 695 (695)
.+..+..+ ...+..++++++|. ++++...++ .|++||. +++.+..+..+.. .+.+|+| +|+
T Consensus 196 ~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~-~~~ 261 (286)
T 1q7f_A 196 YLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVAL-MDD 261 (286)
T ss_dssp EEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEE-ETT
T ss_pred EEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEE-CCC
Confidence 35556443 36789999999986 666776675 9999995 5777877775543 4678998 775
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.02 E-value=9.1e-09 Score=120.17 Aligned_cols=135 Identities=7% Similarity=-0.023 Sum_probs=100.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCc----------------EEEEECCCCeE--EEEe--cccCCCeEEEEEcCCCCEEEEEeC
Q 005473 558 VESCHFSPDGKLLATGGHDKK----------------AVLWCTESFTV--KSTL--EEHTQWITDVRFSPSLSRLATSSA 617 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~----------------V~IWDl~t~~~--~~~l--~~H~~~V~~v~~spdg~~LaTgs~ 617 (695)
+.+++|+|||+.|+.++.|+. |++|++.++.. ...+ ..|...+..+.|+|||++|+.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 678999999999999988776 99999987652 2233 335667889999999999887764
Q ss_pred -----CCeEEEEECCC------CCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCC---CcEEEEECCCCe--EEEEEec
Q 005473 618 -----DRTVRVWDTEN------PDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN---SEIRYWSINNGS--CAGVFKN 681 (695)
Q Consensus 618 -----DgtIrvWDl~t------~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D---g~IriWDl~tg~--~v~~~~~ 681 (695)
+..|++||+.+ +...+..+..+...+.. .|+|+|..+++.+..+ +.|.+||+.++. ....+..
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC
Confidence 56899999986 43235666777766665 4889999887776644 379999998874 2345555
Q ss_pred CCC--cEEEEEEeCC
Q 005473 682 FFE--SFVSVRVVQP 694 (695)
Q Consensus 682 h~~--~VtsVaf~sP 694 (695)
|.. .|..++| +|
T Consensus 332 ~~~~~~~~~~~~-~~ 345 (710)
T 2xdw_A 332 EHEKDVLEWVAC-VR 345 (710)
T ss_dssp CCSSCEEEEEEE-ET
T ss_pred CCCCCeEEEEEE-Ec
Confidence 544 6777888 53
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.01 E-value=4.7e-08 Score=99.84 Aligned_cols=169 Identities=8% Similarity=0.056 Sum_probs=117.7
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEE-cCCCCEEEEEeC-CCcEEEEEC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHF-SPDGKLLATGGH-DKKAVLWCT 584 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~f-spdg~~LaSgs~-Dg~V~IWDl 584 (695)
+++++.+.++.|.+|+.... ....+.. .....+|...+.++++ .++++++++... ++.|++||
T Consensus 42 ~l~v~~~~~~~i~~~d~~g~------~~~~~~~--------~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKEGR------FKFQFGE--------CGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN- 106 (286)
T ss_dssp CEEEEEGGGTEEEEECTTSC------EEEEECC--------BSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred CEEEEECCCCEEEEECCCCc------EEEEecc--------cCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence 56666677888999854211 0000000 0001234456899999 567776666543 88999999
Q ss_pred CCCeEEEEec-ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEe--cCCCCeEEEEEecCCCeEEEEEeC
Q 005473 585 ESFTVKSTLE-EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFT--GHSTTVMSLDFHPSKEDLLCSCDN 661 (695)
Q Consensus 585 ~t~~~~~~l~-~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~--gh~~~V~sl~fspdg~~llaSgs~ 661 (695)
.+++.+..+. .+...+.+++++|+++++++...++.|++||... .. +..+. ++...+.+++++++|. ++++...
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~-~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~ 183 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NV-LHKFGCSKHLEFPNGVVVNDKQE-IFISDNR 183 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE-EEEEECTTTCSSEEEEEECSSSE-EEEEEGG
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CE-EEEeCCCCccCCcEEEEECCCCC-EEEEECC
Confidence 5667766664 3456789999999999888888889999999753 33 44443 4456789999999987 7778778
Q ss_pred CCcEEEEECCCCeEEEEEecC--CCcEEEEEEeCCC
Q 005473 662 NSEIRYWSINNGSCAGVFKNF--FESFVSVRVVQPR 695 (695)
Q Consensus 662 Dg~IriWDl~tg~~v~~~~~h--~~~VtsVaf~sPd 695 (695)
++.|++||. +++.+..+..+ ...+..|+| +|+
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~-d~~ 217 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGITNYPIGVGI-NSN 217 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTSCSEEEEEE-CTT
T ss_pred CCEEEEEcC-CCCEEEEEccCCccCCCcEEEE-CCC
Confidence 999999997 46677777543 357789998 774
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.00 E-value=7.4e-08 Score=100.51 Aligned_cols=166 Identities=10% Similarity=0.069 Sum_probs=111.7
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCC----CcEEEE
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHD----KKAVLW 582 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~D----g~V~IW 582 (695)
++++++..++.|.+|+...+. .. .....+...|.+++|+++|++++++..+ +.|.+|
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~-----------------~~--~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKE-----------------IK--RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCC-----------------EE--EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCc-----------------EE--EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 556667778888888543221 11 1112345679999999999988887766 689999
Q ss_pred ECCCCeEEEEec--ccCCCeEEEEEcCCCCEEEEEeC------CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCe
Q 005473 583 CTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSA------DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKED 654 (695)
Q Consensus 583 Dl~t~~~~~~l~--~H~~~V~~v~~spdg~~LaTgs~------DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~ 654 (695)
|.+++.....+. .+...+.+++++|++.++++... .+.|..||.+++.. ..+..+...+..++|+|++..
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV--TPIIQNISVANGIALSTDEKV 195 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE--EEEEEEESSEEEEEECTTSSE
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE--EEeecCCCcccceEECCCCCE
Confidence 998877654443 34567999999999988877654 35677777665442 233333346889999999987
Q ss_pred EEEEEeCCCcEEEEECCC-CeEEEE--------EecCCCcEEEEEEeCCC
Q 005473 655 LLCSCDNNSEIRYWSINN-GSCAGV--------FKNFFESFVSVRVVQPR 695 (695)
Q Consensus 655 llaSgs~Dg~IriWDl~t-g~~v~~--------~~~h~~~VtsVaf~sPd 695 (695)
++++.+.++.|++||+++ +..+.. +.++ ..+..|++ +|+
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~-d~~ 243 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCI-DSD 243 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEE-BTT
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEE-CCC
Confidence 777777789999999964 433221 1122 35677777 654
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.98 E-value=1.9e-08 Score=104.96 Aligned_cols=144 Identities=8% Similarity=0.070 Sum_probs=105.5
Q ss_pred EEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC----CeEEE
Q 005473 548 FQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD----RTVRV 623 (695)
Q Consensus 548 v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D----gtIrv 623 (695)
+..+..+...+.+++|+++|++++++..++.|++||..+++.......+...|.+++|+|+++++++...+ +.|.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 44556666778999999999988888889999999999887765554567889999999999888887666 68999
Q ss_pred EECCCCCeeEEEEe--cCCCCeEEEEEecCCCeEEEEEeC------CCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 624 WDTENPDYSLRTFT--GHSTTVMSLDFHPSKEDLLCSCDN------NSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 624 WDl~t~~~~l~~~~--gh~~~V~sl~fspdg~~llaSgs~------Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
||.+++.. ...+. .+...+.+++++|+|. ++++... .+.|..||..+++..... .+...+..++| +|+
T Consensus 117 ~d~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~-~~d 192 (333)
T 2dg1_A 117 ATENGDNL-QDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIAL-STD 192 (333)
T ss_dssp ECTTSCSC-EEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEE-CTT
T ss_pred EeCCCCEE-EEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEE-CCC
Confidence 99987654 22232 2445789999999987 5545443 356777776655544333 23345678888 775
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.96 E-value=4.4e-08 Score=100.89 Aligned_cols=176 Identities=13% Similarity=0.044 Sum_probs=121.6
Q ss_pred CCceEEEEecCCCccccccCCccCCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeE
Q 005473 480 SSKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVE 559 (695)
Q Consensus 480 ~~~s~l~~~~dg~~~la~s~~~l~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~ 559 (695)
.....+.|++++. .++.++..++.|..|+...+ +..+..+...+.
T Consensus 28 ~~~eg~~~d~~g~--------------~l~~~~~~~~~i~~~~~~~~---------------------~~~~~~~~~~~~ 72 (296)
T 3e5z_A 28 TWTEGPVYVPARS--------------AVIFSDVRQNRTWAWSDDGQ---------------------LSPEMHPSHHQN 72 (296)
T ss_dssp SSEEEEEEEGGGT--------------EEEEEEGGGTEEEEEETTSC---------------------EEEEESSCSSEE
T ss_pred ccccCCeEeCCCC--------------EEEEEeCCCCEEEEEECCCC---------------------eEEEECCCCCcc
Confidence 3445667777663 36777788888888854211 123344566799
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeccc----CCCeEEEEEcCCCCEEEEE----e-------------CC
Q 005473 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEH----TQWITDVRFSPSLSRLATS----S-------------AD 618 (695)
Q Consensus 560 ~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H----~~~V~~v~~spdg~~LaTg----s-------------~D 618 (695)
+++|+++|+++++...++.|.+||..+++........ ...+.+++++|+|+++++. + ..
T Consensus 73 ~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 73 GHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp EEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred eeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCC
Confidence 9999999998887777789999999887765443322 2356789999999988873 2 13
Q ss_pred CeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC-CCeE---EEEEecCCCcEEEEEEeCC
Q 005473 619 RTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN-NGSC---AGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 619 gtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~-tg~~---v~~~~~h~~~VtsVaf~sP 694 (695)
+.|..||.. +. +..+..+...+..++|+|+++.+ ++.+.++.|++||+. +++. ...+..+...+..|+| +|
T Consensus 153 ~~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~-d~ 227 (296)
T 3e5z_A 153 RWVFRLAPD-GT--LSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRV-DA 227 (296)
T ss_dssp CEEEEECTT-SC--EEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEE-BT
T ss_pred cEEEEECCC-CC--EEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEE-CC
Confidence 456666655 33 44555666778999999999966 788888999999997 5554 3344334445566777 65
Q ss_pred C
Q 005473 695 R 695 (695)
Q Consensus 695 d 695 (695)
+
T Consensus 228 ~ 228 (296)
T 3e5z_A 228 G 228 (296)
T ss_dssp T
T ss_pred C
Confidence 3
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.93 E-value=2.2e-08 Score=104.84 Aligned_cols=125 Identities=10% Similarity=0.107 Sum_probs=87.3
Q ss_pred eEEEEEcCCCCEEEEEeCC---------------------------CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCC
Q 005473 558 VESCHFSPDGKLLATGGHD---------------------------KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLS 610 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~D---------------------------g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~ 610 (695)
|.+++|+|||+.|+.++.+ ..|++||+.+++.+..+.. . .+..++|+|++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 8999999999988887642 5699999998887455554 3 78899999999
Q ss_pred EEEEEeCCC-------eEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCC-------CcEEEEECCCCeEE
Q 005473 611 RLATSSADR-------TVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN-------SEIRYWSINNGSCA 676 (695)
Q Consensus 611 ~LaTgs~Dg-------tIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D-------g~IriWDl~tg~~v 676 (695)
++++++.+. ...||.+++ .. +..+..+ ..+.++ +|+|+.+++.+..+ ..|++|| ++++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~ 255 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVM 255 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE
T ss_pred EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceE
Confidence 888876542 344554443 33 3444444 455554 99999776655432 4788888 66665
Q ss_pred EEEecCCCcEEE-EEEeC
Q 005473 677 GVFKNFFESFVS-VRVVQ 693 (695)
Q Consensus 677 ~~~~~h~~~Vts-Vaf~s 693 (695)
....+|...|.. +.| +
T Consensus 256 ~l~~~~~~~~~~~~~~-s 272 (347)
T 2gop_A 256 GILDEVDRGVGQAKIK-D 272 (347)
T ss_dssp ESSTTCCSEEEEEEEE-T
T ss_pred eccccCCcccCCccEE-c
Confidence 555566777876 777 5
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.93 E-value=2.4e-08 Score=107.29 Aligned_cols=80 Identities=15% Similarity=0.219 Sum_probs=63.0
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeC----------CCcEEEEECCCCeEEEEeccc------CCCeEEEEEcCCCCEE
Q 005473 549 QLIPASTSKVESCHFSPDGKLLATGGH----------DKKAVLWCTESFTVKSTLEEH------TQWITDVRFSPSLSRL 612 (695)
Q Consensus 549 ~~l~~H~~~V~~v~fspdg~~LaSgs~----------Dg~V~IWDl~t~~~~~~l~~H------~~~V~~v~~spdg~~L 612 (695)
..+..+..+ .++|+|||++|+++.. +++|.+||+.+.+.+..+... ......++|+|+|++|
T Consensus 45 ~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l 122 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFI 122 (361)
T ss_dssp EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEE
T ss_pred EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEE
Confidence 344555444 8999999999999863 678999999999888877532 3456789999999999
Q ss_pred EEEeC--CCeEEEEECCCCC
Q 005473 613 ATSSA--DRTVRVWDTENPD 630 (695)
Q Consensus 613 aTgs~--DgtIrvWDl~t~~ 630 (695)
++++. +++|.+||+++.+
T Consensus 123 ~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 123 VLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp EEEEESSSEEEEEEETTTTE
T ss_pred EEECCCCCCeEEEEECCCCc
Confidence 88864 5789999987654
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.90 E-value=7.8e-08 Score=98.98 Aligned_cols=128 Identities=13% Similarity=0.084 Sum_probs=94.9
Q ss_pred CeEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCC
Q 005473 557 KVESCHFSPDGKLLATGGH-----------------DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADR 619 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~-----------------Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~Dg 619 (695)
.+.+++++++|+++++.+. .+.|..+|.. ++ +..+..+...+..++|+|+++.|++.+.++
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~ 193 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDN 193 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTT
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCC
Confidence 4678999999998887321 2355555554 44 344555667789999999999887777889
Q ss_pred eEEEEECC-CCCe-e-EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEE
Q 005473 620 TVRVWDTE-NPDY-S-LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 620 tIrvWDl~-t~~~-~-l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf 691 (695)
.|++||+. ++.. . ...+..+...+.+++++++|. ++++. ++.|.+||.. ++.+..+..+.. +++++|
T Consensus 194 ~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f 263 (296)
T 3e5z_A 194 ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCF 263 (296)
T ss_dssp EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEE
T ss_pred eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEE
Confidence 99999997 3332 0 233334556678899999997 55455 7899999986 888888888877 899998
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.90 E-value=9.6e-08 Score=111.47 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=103.4
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCC------Ce-EEEEecccCCCeEEEEEcCCCCEEEEEeCC-
Q 005473 552 PASTSKVESCHFSPDGKLLATGGH-----DKKAVLWCTES------FT-VKSTLEEHTQWITDVRFSPSLSRLATSSAD- 618 (695)
Q Consensus 552 ~~H~~~V~~v~fspdg~~LaSgs~-----Dg~V~IWDl~t------~~-~~~~l~~H~~~V~~v~~spdg~~LaTgs~D- 618 (695)
..|...+..+.|+|||++|+.++. +..|++||+.+ +. ....+..+...+.. .|+|+|..|+..+.+
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRH 307 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCC
Confidence 345666889999999999888765 56899999976 43 45566667666655 488888877666543
Q ss_pred ---CeEEEEECCCCCe-eEEEEecCCC--CeEEEEEecCCCeEEEEEeCCCc--EEEEECCCCeEEEEEecCCCcEEEEE
Q 005473 619 ---RTVRVWDTENPDY-SLRTFTGHST--TVMSLDFHPSKEDLLCSCDNNSE--IRYWSINNGSCAGVFKNFFESFVSVR 690 (695)
Q Consensus 619 ---gtIrvWDl~t~~~-~l~~~~gh~~--~V~sl~fspdg~~llaSgs~Dg~--IriWDl~tg~~v~~~~~h~~~VtsVa 690 (695)
+.|.+||+.++.. ....+..|.. .|.+++|+++ ..++++...|+. |++||+.+|+++..+..+.+.|..++
T Consensus 308 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~ 386 (710)
T 2xdw_A 308 SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRS-NFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYS 386 (710)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEE
T ss_pred CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcC-CEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEe
Confidence 3699999987642 2345555544 5788999855 457888888884 66678778888888888877888888
Q ss_pred EeCCC
Q 005473 691 VVQPR 695 (695)
Q Consensus 691 f~sPd 695 (695)
| +|+
T Consensus 387 ~-s~d 390 (710)
T 2xdw_A 387 G-QKK 390 (710)
T ss_dssp C-CTT
T ss_pred c-CCC
Confidence 8 764
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.89 E-value=8.5e-08 Score=99.33 Aligned_cols=159 Identities=13% Similarity=0.027 Sum_probs=118.6
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST-SKVESCHFSPDGKLLATGGHDKKAVLWCT 584 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~-~~V~~v~fspdg~~LaSgs~Dg~V~IWDl 584 (695)
++++++++.|+.|.+|+..++ +.+..+..+. ..+.++.++|+|++|+ +.++.|..||.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG-------------------~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~ 63 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTK-------------------EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR 63 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTT-------------------EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT
T ss_pred CcEEEeeCCCCEEEEEECCCC-------------------eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC
Confidence 378999999999999965333 2233344444 4688999999999888 45788999999
Q ss_pred CCCeEEEEecccC-CCeEEEEEcCCCCEEEEEeC-CCeEEEEECCCCCeeEEEEec------CCCCeEEEEEecCCCeEE
Q 005473 585 ESFTVKSTLEEHT-QWITDVRFSPSLSRLATSSA-DRTVRVWDTENPDYSLRTFTG------HSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 585 ~t~~~~~~l~~H~-~~V~~v~~spdg~~LaTgs~-DgtIrvWDl~t~~~~l~~~~g------h~~~V~sl~fspdg~~ll 656 (695)
+++.+..+..+. ..+.++.+.++|++|++.+. ++.|..+|. +++. +..+.. +......+.+.++|. ++
T Consensus 64 -~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~-l~~~~~~~~~~~~~~~~~~v~~~~~G~-~l 139 (276)
T 3no2_A 64 -DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEV-LSKTEFETGIERPHAQFRQINKNKKGN-YL 139 (276)
T ss_dssp -TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCE-EEEEEECCSCSSGGGSCSCCEECTTSC-EE
T ss_pred -CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCE-EEEEeccCCCCcccccccCceECCCCC-EE
Confidence 899998887653 57889999999999999887 778888886 4453 444431 112345667889988 66
Q ss_pred EEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEE
Q 005473 657 CSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 657 aSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf 691 (695)
++...++.|.+||.. |+.+.++..+. .+.++.+
T Consensus 140 v~~~~~~~v~~~d~~-G~~~w~~~~~~-~~~~~~~ 172 (276)
T 3no2_A 140 VPLFATSEVREIAPN-GQLLNSVKLSG-TPFSSAF 172 (276)
T ss_dssp EEETTTTEEEEECTT-SCEEEEEECSS-CCCEEEE
T ss_pred EEecCCCEEEEECCC-CCEEEEEECCC-CccceeE
Confidence 688889999999988 99999988653 3344444
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.87 E-value=3.9e-08 Score=114.55 Aligned_cols=173 Identities=11% Similarity=-0.009 Sum_probs=116.2
Q ss_pred CceEEEEecCCCccccccCCccCCCCcEEE-----EeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCC
Q 005473 481 SKSLLMFGSDGMGSLTSAPNQLTDMDRFVD-----DGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAST 555 (695)
Q Consensus 481 ~~s~l~~~~dg~~~la~s~~~l~~~~~~la-----sgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~ 555 (695)
....+.|+||+. +++ .|+.+..|++|+...+.... . ..+...
T Consensus 122 ~~~~~~~SPDG~---------------~la~~~~~~G~~~~~i~v~dl~tg~~~~----------~-------~~~~~~- 168 (695)
T 2bkl_A 122 SLGTWAVSWDGK---------------KVAFAQKPNAADEAVLHVIDVDSGEWSK----------V-------DVIEGG- 168 (695)
T ss_dssp EEEEEEECTTSS---------------EEEEEEEETTCSCCEEEEEETTTCCBCS----------S-------CCBSCC-
T ss_pred EEEEEEECCCCC---------------EEEEEECCCCCceEEEEEEECCCCCCcC----------C-------cccCcc-
Confidence 456778888874 334 45566789999775543100 0 001111
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCc-------------EEEEECCCCe----EEEEecccCCCeEEEEEcCCCCEEEEEeCC
Q 005473 556 SKVESCHFSPDGKLLATGGHDKK-------------AVLWCTESFT----VKSTLEEHTQWITDVRFSPSLSRLATSSAD 618 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~-------------V~IWDl~t~~----~~~~l~~H~~~V~~v~~spdg~~LaTgs~D 618 (695)
....++|+|||+.|+.++.|.. |++|++.++. ++.....|...+..+.|+|||++|+.++.+
T Consensus 169 -~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 169 -KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp -TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred -cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 1257999999999999998876 9999998776 333334456789999999999998887766
Q ss_pred C----eEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEe---CCCcEEEEECCCCeE---EEEEecC-CCcEE
Q 005473 619 R----TVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCD---NNSEIRYWSINNGSC---AGVFKNF-FESFV 687 (695)
Q Consensus 619 g----tIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs---~Dg~IriWDl~tg~~---v~~~~~h-~~~Vt 687 (695)
+ .|++||..++. ...+..+...+....| ++|. +++++. .++.|.+||+.++.. ...+..+ ...|.
T Consensus 248 ~~~~~~l~~~~~~~~~--~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~ 323 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKD--FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLL 323 (695)
T ss_dssp TTTEEEEEEECTTCSS--CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE
T ss_pred CCCceEEEEEcCCCCc--eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEE
Confidence 5 67777765543 4555566666777777 6777 776665 358999999987753 3333333 44567
Q ss_pred EEEE
Q 005473 688 SVRV 691 (695)
Q Consensus 688 sVaf 691 (695)
.++|
T Consensus 324 ~~~~ 327 (695)
T 2bkl_A 324 SVSI 327 (695)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7776
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.87 E-value=5.5e-09 Score=110.87 Aligned_cols=133 Identities=10% Similarity=0.039 Sum_probs=94.3
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEE-------------------EEEcCCCCEEEEE----
Q 005473 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITD-------------------VRFSPSLSRLATS---- 615 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~-------------------v~~spdg~~LaTg---- 615 (695)
.++.|+|||++|+.++.++.|++||+.+++.......+.....+ +.|+|+++.++.+
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 34889999999999999999999999988877666655544333 4567777766554
Q ss_pred -eCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEec-CCCeEEEEEeCC-----CcEEEEECCCCeEEEEEecC--CCcE
Q 005473 616 -SADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHP-SKEDLLCSCDNN-----SEIRYWSINNGSCAGVFKNF--FESF 686 (695)
Q Consensus 616 -s~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fsp-dg~~llaSgs~D-----g~IriWDl~tg~~v~~~~~h--~~~V 686 (695)
..+..|++||+.++.. ..+..+...+..+.|+| ++..+++++... ..|.+||+..++... +..+ ...+
T Consensus 164 ~~~~~~l~~~d~~~g~~--~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~ 240 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGEL--EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESC 240 (396)
T ss_dssp TCCCEEEEEEETTTCCE--EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEE
T ss_pred CCCcceEEEEECCCCcE--EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccc
Confidence 3567899999988664 33335667899999999 777555544322 468999987654333 3333 2357
Q ss_pred EEEEEeCCC
Q 005473 687 VSVRVVQPR 695 (695)
Q Consensus 687 tsVaf~sPd 695 (695)
..++| +|+
T Consensus 241 ~~~~~-spd 248 (396)
T 3c5m_A 241 THEFW-IPD 248 (396)
T ss_dssp EEEEE-CTT
T ss_pred cceEE-CCC
Confidence 88899 886
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.87 E-value=1.3e-07 Score=95.28 Aligned_cols=136 Identities=6% Similarity=-0.050 Sum_probs=98.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
..+.+++++++|+++++.. ++.|.+||..+.............+.++++++++.++++...++.|.+||..+... ...
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-~~~ 144 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVL 144 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-EEC
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-Eee
Confidence 4578899999999666655 88999999876544322223336789999999998888877789999998765433 222
Q ss_pred EecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
.......+.+++++++|. ++++...++.|++||...+........+...+.+|++ +|+
T Consensus 145 ~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~-d~~ 202 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAV-DEA 202 (270)
T ss_dssp CCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEE-CTT
T ss_pred ccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEeecccCCCCceEEEE-CCC
Confidence 223334678999999987 7767777889999999876655443344466788888 764
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.85 E-value=1.5e-07 Score=94.72 Aligned_cols=137 Identities=10% Similarity=0.010 Sum_probs=100.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
..+.+++++++|+++++...++.|.+||..+.............+.+|++++++.++++...++.|.+||...... ...
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-~~~ 186 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-VVL 186 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-EEC
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-Eee
Confidence 4588999999999887777788999998765544333333345678999999998777777788999999987543 222
Q ss_pred EecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 636 FTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 636 ~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
...+...+.+++++++|. ++++...++.|++||............+...+.+|+| +|+
T Consensus 187 ~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~-~~~ 244 (270)
T 1rwi_B 187 PFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV-DSD 244 (270)
T ss_dssp CCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEE-CTT
T ss_pred cccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEE-CCC
Confidence 233336789999999984 7777777889999998765443332234466788998 774
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.83 E-value=6.8e-08 Score=101.09 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=87.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC--------CeE
Q 005473 557 KVESCHFSPDGKLLATGGHDK-------KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD--------RTV 621 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg-------~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D--------gtI 621 (695)
.+.++.|+||| +++++..++ ...||.+++++. ..+..+ ..+..+ +|+|++|+.++.+ ..|
T Consensus 172 ~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l 246 (347)
T 2gop_A 172 RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKL 246 (347)
T ss_dssp TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEE
T ss_pred CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceE
Confidence 68899999999 888886652 345554445554 344444 555554 9999988877644 368
Q ss_pred EEEECCCCCeeEEEEecCCCCeEE-EEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 622 RVWDTENPDYSLRTFTGHSTTVMS-LDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 622 rvWDl~t~~~~l~~~~gh~~~V~s-l~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
++|| ++. ......+|...+.. +.|+ ++ ++++++.++.++|| +.+++... +..+...|.+++| +|
T Consensus 247 ~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~-s~ 311 (347)
T 2gop_A 247 YIYD--GKE-VMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDV-DE 311 (347)
T ss_dssp EEEC--SSC-EEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEEE-SS
T ss_pred EEEC--CCc-eEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeeee-eC
Confidence 8888 433 23444556677886 8999 76 77788899999999 88666544 4455778899988 75
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.81 E-value=4.6e-09 Score=111.47 Aligned_cols=135 Identities=13% Similarity=-0.007 Sum_probs=96.9
Q ss_pred CeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLLATGGHD---KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~D---g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
.+.+++|+|||++|+.+..+ ..|++||+.+++......++...+..+.|+|++++|+.++.++.|++||+.++.. .
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~-~ 115 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE-Q 115 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE-E
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc-E
Confidence 37788999999998777543 4688899998876544443333333488999999999999999999999988664 4
Q ss_pred EEEecCCCCeEE-------------------EEEecCCCeEEEEE----eCCCcEEEEECCCCeEEEEEecCCCcEEEEE
Q 005473 634 RTFTGHSTTVMS-------------------LDFHPSKEDLLCSC----DNNSEIRYWSINNGSCAGVFKNFFESFVSVR 690 (695)
Q Consensus 634 ~~~~gh~~~V~s-------------------l~fspdg~~llaSg----s~Dg~IriWDl~tg~~v~~~~~h~~~VtsVa 690 (695)
..+..+...... ++|+|+++.+++.. ..+..|++||+.++++.... .+...+..++
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~ 194 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPI 194 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccce
Confidence 444444443333 35677777554332 45678999999988766555 4667788899
Q ss_pred EeCC
Q 005473 691 VVQP 694 (695)
Q Consensus 691 f~sP 694 (695)
| +|
T Consensus 195 ~-sp 197 (396)
T 3c5m_A 195 Y-RP 197 (396)
T ss_dssp E-ET
T ss_pred E-CC
Confidence 9 88
No 190
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.79 E-value=2.4e-08 Score=108.82 Aligned_cols=124 Identities=17% Similarity=0.156 Sum_probs=98.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-----------EEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFT-----------VKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWD 625 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~-----------~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWD 625 (695)
.++.+++++...+|++|+.|+ ++||++.... ....+ .+.. |+.|+| ++.+|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 589999999999999999986 6669865332 21222 3666 999999 88999998 889999999
Q ss_pred CCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCCC
Q 005473 626 TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 626 l~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+++... ......|...|.++.+.+. . +++++.||.|.+||+.++..+. +...|+|++| +|+
T Consensus 113 v~sl~~-~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~W-Spk 173 (388)
T 1xip_A 113 LEELSE-FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDV-TNS 173 (388)
T ss_dssp SSSTTC-EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEE-CSS
T ss_pred chhhhc-cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcccc----ccCCceEEEE-cCC
Confidence 988663 5566677888888877654 3 6678899999999999887654 4568999999 985
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.78 E-value=2.3e-06 Score=86.69 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=100.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE-EEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVK-STLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS 632 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~-~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~ 632 (695)
+...+.+++++++|+++++...++.|.+||.. ++.. ..+......+.++++.+++.++++...++.|.+||. ++...
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 34568999999999988887778899999986 3332 222234567899999999988888777889999999 54542
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEE-EecCCCcEEEEEEeCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGV-FKNFFESFVSVRVVQPR 695 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~-~~~h~~~VtsVaf~sPd 695 (695)
......+...+.+++++++|. ++++...++.|.+||. +++.... +..+...+.+|++ +|+
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-~~~ 193 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITK-GND 193 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE-CTT
T ss_pred EecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEE-CCC
Confidence 223333456789999999986 6667666789999998 6665543 3334456788888 764
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.75 E-value=2e-07 Score=98.43 Aligned_cols=130 Identities=13% Similarity=0.117 Sum_probs=100.2
Q ss_pred eEEEEEcCCCCEEEEEeCC----------CcEEEEECCCCeEEEEeccc-CCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 005473 558 VESCHFSPDGKLLATGGHD----------KKAVLWCTESFTVKSTLEEH-TQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~D----------g~V~IWDl~t~~~~~~l~~H-~~~V~~v~~spdg~~LaTgs~DgtIrvWDl 626 (695)
...++++++|++++++..+ +.|.+||..+++.+..+... ......++|+|++++|+++.. .|.+||+
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~ 251 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPV 251 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEET
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEEC
Confidence 5678999999977776655 78999999999887776532 246889999999999888754 8999999
Q ss_pred CCCCeeEEE-EecCCCCeEEEEEecCCCeEEEEE----eCCCcEEEEECCCCeEEEEEecCCCcEEEEEE
Q 005473 627 ENPDYSLRT-FTGHSTTVMSLDFHPSKEDLLCSC----DNNSEIRYWSINNGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 627 ~t~~~~l~~-~~gh~~~V~sl~fspdg~~llaSg----s~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf 691 (695)
.+++..... +..+......++++|++..++++. ..++.|.+||.. |+.+.++.....| ..++|
T Consensus 252 ~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P-~~~~~ 319 (328)
T 3dsm_A 252 EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIP-GAFCW 319 (328)
T ss_dssp TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESE-EEEEE
T ss_pred CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCc-ceEEE
Confidence 886642111 222245689999999767788887 678999999998 9999998865544 66776
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.74 E-value=1.4e-06 Score=99.69 Aligned_cols=165 Identities=9% Similarity=-0.023 Sum_probs=120.2
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE- 585 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~- 585 (695)
.++++...++.|.+|+.... +.+..+... ..+.++.|+|||+++++++.|+.|.+||+.
T Consensus 168 ~~~V~~~~~~~V~viD~~t~-------------------~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTY-------------------EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp EEEEEETTTTEEEEEETTTC-------------------CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred eEEEEeCCCCeEEEEECCCC-------------------eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCC
Confidence 56677778899999965433 223333332 246799999999999999999999999995
Q ss_pred -CCeEEEEecccCCCeEEEEEc----CCCCEEEEEeC-CCeEEEEECCCCCeeEEEEec----------C-CCCeEEEEE
Q 005473 586 -SFTVKSTLEEHTQWITDVRFS----PSLSRLATSSA-DRTVRVWDTENPDYSLRTFTG----------H-STTVMSLDF 648 (695)
Q Consensus 586 -t~~~~~~l~~H~~~V~~v~~s----pdg~~LaTgs~-DgtIrvWDl~t~~~~l~~~~g----------h-~~~V~sl~f 648 (695)
+.+.+..+... .....++|+ |+|+++++++. +++|.|||..+.+. +.++.. | ...|..+.+
T Consensus 228 ~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~-~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 228 KEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-KKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp SSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE-EEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred CCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE-EEEEeccccccccccccCCCceEEEEE
Confidence 78888777653 346799999 69999877765 68999999988664 554431 2 226888999
Q ss_pred ecCCCeEEEEEeCCCcEEEEECCCCeEE--EEEecCCCcEEEEEEeCCC
Q 005473 649 HPSKEDLLCSCDNNSEIRYWSINNGSCA--GVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 649 spdg~~llaSgs~Dg~IriWDl~tg~~v--~~~~~h~~~VtsVaf~sPd 695 (695)
+++++.++++...+|.|.++|+.+.+.+ ..+. .......+.| +|+
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~-~pd 352 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGL-DGS 352 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEE-CTT
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceE-CCC
Confidence 9998888888888999999999875432 2232 2234456777 664
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.73 E-value=5.4e-07 Score=95.10 Aligned_cols=163 Identities=12% Similarity=-0.023 Sum_probs=112.2
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
++.++...++.|.+|+.... +.+..+.. ......++++++++++++...++.|.+||..+
T Consensus 55 ~lyv~~~~~~~v~viD~~t~-------------------~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTF-------------------KEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTC-------------------CEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred EEEEEEcCCCEEEEEECccc-------------------EEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 44455556677888855322 22333332 34578999999985555544899999999999
Q ss_pred CeEEEEecccC-----CCeEEEEEcCCCCEEEEEe--CCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEE
Q 005473 587 FTVKSTLEEHT-----QWITDVRFSPSLSRLATSS--ADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSC 659 (695)
Q Consensus 587 ~~~~~~l~~H~-----~~V~~v~~spdg~~LaTgs--~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSg 659 (695)
++.+..+.... .....+++ ++..|+.++ .+++|.+||+.+++. +..+.. ......+.++|+|+ +++++
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~-~~~i~~-g~~p~~i~~~~dG~-l~v~~ 189 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV-VDELTI-GIQPTSLVMDKYNK-MWTIT 189 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE-EEEEEC-SSCBCCCEECTTSE-EEEEB
T ss_pred CeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE-EEEEEc-CCCccceEEcCCCC-EEEEE
Confidence 99887765332 14557777 345555554 489999999998764 555543 23467889999987 55565
Q ss_pred eCC----------CcEEEEECCCCeEEEEEecC-CCcEEEEEEeCCC
Q 005473 660 DNN----------SEIRYWSINNGSCAGVFKNF-FESFVSVRVVQPR 695 (695)
Q Consensus 660 s~D----------g~IriWDl~tg~~v~~~~~h-~~~VtsVaf~sPd 695 (695)
..+ +.|.+||..+++.+..+... ......|+| +|+
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~-~~d 235 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL-NGT 235 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE-CTT
T ss_pred CCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE-ecC
Confidence 544 78999999999988777643 235689999 885
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.73 E-value=6.2e-08 Score=112.90 Aligned_cols=136 Identities=13% Similarity=0.059 Sum_probs=96.2
Q ss_pred CCCCCeEEEEEcCCCCEEE-----EEeCCCcEEEEECCCCeEEEEecccCCCe--EEEEEcCCCCEEEEEeCCCe-----
Q 005473 553 ASTSKVESCHFSPDGKLLA-----TGGHDKKAVLWCTESFTVKSTLEEHTQWI--TDVRFSPSLSRLATSSADRT----- 620 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~La-----Sgs~Dg~V~IWDl~t~~~~~~l~~H~~~V--~~v~~spdg~~LaTgs~Dgt----- 620 (695)
+|...+.+++|||||++|| .|+.+..|+|||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4555689999999999988 44445789999999988641 1122222 68999999999999988876
Q ss_pred --------EEEEECCCCCe---eEEEEecCCCCeEEEEEecCCCeEEEEEeCC-C--cEEEEECCCCeEEEEEecCCCcE
Q 005473 621 --------VRVWDTENPDY---SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN-S--EIRYWSINNGSCAGVFKNFFESF 686 (695)
Q Consensus 621 --------IrvWDl~t~~~---~l~~~~gh~~~V~sl~fspdg~~llaSgs~D-g--~IriWDl~tg~~v~~~~~h~~~V 686 (695)
|++|++.++.. ++.....|...+.++.|+|||+.+++++..+ + .|++||..+++ ...+..+.+.+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCce
Confidence 99999987652 2333444666899999999999777665543 2 67777765554 34444455555
Q ss_pred EEEEE
Q 005473 687 VSVRV 691 (695)
Q Consensus 687 tsVaf 691 (695)
....|
T Consensus 275 ~~~~~ 279 (695)
T 2bkl_A 275 YEVHA 279 (695)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55544
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.72 E-value=1.1e-06 Score=90.75 Aligned_cols=122 Identities=14% Similarity=0.093 Sum_probs=96.9
Q ss_pred CCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEec------ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 005473 556 SKVESCHFSPDGKLLATGGH-DKKAVLWCTESFTVKSTLE------EHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN 628 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~-Dg~V~IWDl~t~~~~~~l~------~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t 628 (695)
..+.++.+.++|++|++.+. ++.|..+|. +++.+..+. .+...+..+++.+++.+|++...++.|.+||..
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 45889999999999999887 778888886 677776664 222345567889999999999999999999998
Q ss_pred CCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 629 PDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 629 ~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
++. +..+..+ ..+.++.+.++|. +++++..++.|..||..+|+.+..+..+
T Consensus 155 G~~-~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 155 GQL-LNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp SCE-EEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEEEGG
T ss_pred CCE-EEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEecCC
Confidence 665 6777654 4567788889887 5667777889999999999999888743
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.72 E-value=4.4e-06 Score=84.63 Aligned_cols=137 Identities=7% Similarity=0.006 Sum_probs=100.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE-EecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS 632 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~-~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~ 632 (695)
....+.++++.++|+++++...++.|.+||. +++... .+..+...+.++++.+++.++++...++.|.+||. ++...
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 4456899999999998888777889999998 554433 23334567899999999988887777889999999 55542
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEE-EecCCCcEEEEEEeCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGV-FKNFFESFVSVRVVQPR 695 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~-~~~h~~~VtsVaf~sPd 695 (695)
......+...+.+++++++|. ++++...++.|.+||. +++.... +..+...+.+|++ +|+
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-~~~ 235 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITA-GAG 235 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE-CST
T ss_pred EeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEE-CCC
Confidence 222333456688999999987 6666666889999999 6654332 2334567888888 764
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.71 E-value=1e-06 Score=91.20 Aligned_cols=136 Identities=11% Similarity=0.102 Sum_probs=97.0
Q ss_pred CeEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEC
Q 005473 557 KVESCHFSPDGKLLATGGHD---------KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRVWDT 626 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~D---------g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~L-aTgs~DgtIrvWDl 626 (695)
.+.+++++++|+++++...+ ....||.+.....+..+..+......++|+|+++.| ++.+.++.|++||+
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 47899999999977655332 234566554322222333344567899999999876 45566789999997
Q ss_pred C--CCCee----EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeC-C
Q 005473 627 E--NPDYS----LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQ-P 694 (695)
Q Consensus 627 ~--t~~~~----l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~s-P 694 (695)
+ ++... +..+..+.+.+..++++++|. ++++...++.|.+||..+|+.+..+..+...+++++| . |
T Consensus 179 d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f-~g~ 251 (297)
T 3g4e_A 179 DLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCF-GGK 251 (297)
T ss_dssp CTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEE-ESG
T ss_pred cCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEE-eCC
Confidence 4 44321 222333446688999999986 7767777889999999999999999988888999999 6 5
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.67 E-value=3.2e-06 Score=96.68 Aligned_cols=158 Identities=11% Similarity=0.054 Sum_probs=115.2
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEc----CCCCEEEEEeC-CCcEE
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFS----PDGKLLATGGH-DKKAV 580 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fs----pdg~~LaSgs~-Dg~V~ 580 (695)
.+++.+++.|+.|.+|+.... +. +.+..+..... ...++|+ |||++++++.. ++.|.
T Consensus 208 Gr~lyv~~~dg~V~viD~~~~--------------t~---~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 208 GRYLFVIGRDGKVNMIDLWMK--------------EP---TTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp SCEEEEEETTSEEEEEETTSS--------------SC---CEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred CCEEEEEcCCCeEEEEECCCC--------------CC---cEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEE
Confidence 367777888889999965211 11 23334444333 5789999 69998888776 59999
Q ss_pred EEECCCCeEEEEecc----------cCC-CeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEE
Q 005473 581 LWCTESFTVKSTLEE----------HTQ-WITDVRFSPSLSRL-ATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDF 648 (695)
Q Consensus 581 IWDl~t~~~~~~l~~----------H~~-~V~~v~~spdg~~L-aTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~f 648 (695)
|+|..+.+.+.++.. |.. .|..+.+++++..+ +....+|.|.++|+...+...............+.|
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~ 349 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGL 349 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceE
Confidence 999999998877642 222 57888888876654 555667999999998755322222234456778999
Q ss_pred ecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 649 HPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 649 spdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
+|+|+++++++..++.|.+||+.+++.+..+..
T Consensus 350 ~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 350 DGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 999999888888889999999999998877765
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.63 E-value=7.2e-07 Score=104.74 Aligned_cols=132 Identities=11% Similarity=0.046 Sum_probs=91.4
Q ss_pred eEEEEEcCCCCEEEEEeCCCc--------------EEEEECCCCeE--EEEec--ccCCCeEEEEEcCCCCEEEEEeCCC
Q 005473 558 VESCHFSPDGKLLATGGHDKK--------------AVLWCTESFTV--KSTLE--EHTQWITDVRFSPSLSRLATSSADR 619 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~--------------V~IWDl~t~~~--~~~l~--~H~~~V~~v~~spdg~~LaTgs~Dg 619 (695)
+..++|+|| +.|+.++.|+. |++|++.++.. ...+. .|...+..+.|+|||++|+..+.++
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 357899999 98888887654 89999977652 23333 3344688999999999888776543
Q ss_pred -----eEEEEECCCCCee-EEEEecCCCCeEEEEEecCCCeEEEEEeC---CCcEEEEECCCC--eEEEEEecCCCcEEE
Q 005473 620 -----TVRVWDTENPDYS-LRTFTGHSTTVMSLDFHPSKEDLLCSCDN---NSEIRYWSINNG--SCAGVFKNFFESFVS 688 (695)
Q Consensus 620 -----tIrvWDl~t~~~~-l~~~~gh~~~V~sl~fspdg~~llaSgs~---Dg~IriWDl~tg--~~v~~~~~h~~~Vts 688 (695)
.|++||+.++... ...+..+...+.... .|+|..|++.... ++.|.+||+.++ .....+..+...+..
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred CCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 8999999876222 455555655565554 4888877766543 456999999874 444555555555666
Q ss_pred EEE
Q 005473 689 VRV 691 (695)
Q Consensus 689 Vaf 691 (695)
++|
T Consensus 369 ~~~ 371 (741)
T 1yr2_A 369 VGI 371 (741)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.59 E-value=2.5e-06 Score=87.56 Aligned_cols=136 Identities=15% Similarity=0.225 Sum_probs=99.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCC---------------CcEEEEECCCCeEEEEecccCCCeEEEEEc----CCCCEEEEE-
Q 005473 556 SKVESCHFSPDGKLLATGGHD---------------KKAVLWCTESFTVKSTLEEHTQWITDVRFS----PSLSRLATS- 615 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~D---------------g~V~IWDl~t~~~~~~l~~H~~~V~~v~~s----pdg~~LaTg- 615 (695)
..+.+++++++|+++++...+ +.|..||.. ++.... ..+......++|+ |+++.|+.+
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEE
Confidence 347899999999988777655 567777765 554433 3344567889999 998665544
Q ss_pred eCCCeEEEEECC-CCCe----eEEEEecCC-CCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEE
Q 005473 616 SADRTVRVWDTE-NPDY----SLRTFTGHS-TTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSV 689 (695)
Q Consensus 616 s~DgtIrvWDl~-t~~~----~l~~~~gh~-~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsV 689 (695)
..++.|++||++ ++.. .+..+.++. ..+..++++++|. ++++...++.|.+||..+++.+..+..+...+.++
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i 273 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNL 273 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEE
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeE
Confidence 568899999986 3321 123333443 5688999999986 66676678899999998888888888777889999
Q ss_pred EEeCCC
Q 005473 690 RVVQPR 695 (695)
Q Consensus 690 af~sPd 695 (695)
+| +|+
T Consensus 274 ~~-~~d 278 (314)
T 1pjx_A 274 HF-KPQ 278 (314)
T ss_dssp EE-CTT
T ss_pred EE-CCC
Confidence 99 875
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.57 E-value=7.8e-06 Score=84.57 Aligned_cols=163 Identities=10% Similarity=0.030 Sum_probs=102.5
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
.++.+...++.|..|+...+. +..+ .....+.+++|+++|+++++ . +..|.+||.++
T Consensus 26 ~l~~~d~~~~~i~~~d~~~~~--------------------~~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 26 SLLFVDIPAKKVCRWDSFTKQ--------------------VQRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKE 82 (297)
T ss_dssp EEEEEETTTTEEEEEETTTCC--------------------EEEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTT
T ss_pred EEEEEECCCCEEEEEECCCCc--------------------EEEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCC
Confidence 556666677788888543221 0111 12356899999999996554 4 56799999988
Q ss_pred CeEEEEecc----cCCCeEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCC
Q 005473 587 FTVKSTLEE----HTQWITDVRFSPSLSRLATSSAD---------RTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKE 653 (695)
Q Consensus 587 ~~~~~~l~~----H~~~V~~v~~spdg~~LaTgs~D---------gtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~ 653 (695)
++....... ....+.+++++|+|+++++...+ ....||.+..... +..+..+......++|+|+++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTTSC
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCCCC
Confidence 775433322 12458899999999977765321 2334555443232 233333345678999999999
Q ss_pred eEEEEEeCCCcEEEEEC--CCCeE-----EEEEecCCCcEEEEEEeCC
Q 005473 654 DLLCSCDNNSEIRYWSI--NNGSC-----AGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 654 ~llaSgs~Dg~IriWDl--~tg~~-----v~~~~~h~~~VtsVaf~sP 694 (695)
.++++.+.++.|.+||+ .+|.. +..+..+.+.+..|++ ++
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~-d~ 208 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI-DA 208 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE-BT
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE-CC
Confidence 88888888899999997 45543 2222233345566666 54
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.56 E-value=4.3e-06 Score=85.80 Aligned_cols=136 Identities=10% Similarity=0.067 Sum_probs=91.9
Q ss_pred CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEE-ecc----cCCCeEEEEEcCCCCEEEEEeCC---------
Q 005473 554 STSKVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKST-LEE----HTQWITDVRFSPSLSRLATSSAD--------- 618 (695)
Q Consensus 554 H~~~V~~v~fspd-g~~LaSgs~Dg~V~IWDl~t~~~~~~-l~~----H~~~V~~v~~spdg~~LaTgs~D--------- 618 (695)
+...+.+++++++ |+++++.. +..|.+||.. ++.... ... +...+.+++++++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 4456899999999 76555444 4579999998 665433 221 12458899999999888877655
Q ss_pred ------CeEEEEECCCCCeeEEEEecCCCCeEEEEEe----cCCCeEEEEEeCCCcEEEEECC-CCe-----EEEEEecC
Q 005473 619 ------RTVRVWDTENPDYSLRTFTGHSTTVMSLDFH----PSKEDLLCSCDNNSEIRYWSIN-NGS-----CAGVFKNF 682 (695)
Q Consensus 619 ------gtIrvWDl~t~~~~l~~~~gh~~~V~sl~fs----pdg~~llaSgs~Dg~IriWDl~-tg~-----~v~~~~~h 682 (695)
+.|..||.. +.. ..+..+......++|+ |+++.++++...++.|++||+. +++ ....+.++
T Consensus 147 ~~~~~~~~l~~~~~~-g~~--~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQM--IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp TTSSSCEEEEEECTT-SCE--EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred cccCCCCeEEEECCC-CCE--EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC
Confidence 567777776 332 2233334567889999 9987777777778999999986 454 22333344
Q ss_pred C-CcEEEEEEeCCC
Q 005473 683 F-ESFVSVRVVQPR 695 (695)
Q Consensus 683 ~-~~VtsVaf~sPd 695 (695)
. ..+..|++ +|+
T Consensus 224 ~~~~p~~i~~-d~~ 236 (314)
T 1pjx_A 224 HEGGADGMDF-DED 236 (314)
T ss_dssp SSCEEEEEEE-BTT
T ss_pred CCCCCCceEE-CCC
Confidence 3 45677777 653
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.56 E-value=2.7e-05 Score=78.72 Aligned_cols=137 Identities=9% Similarity=-0.020 Sum_probs=99.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE-EecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS 632 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~-~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~ 632 (695)
+...+.++++.++|+++++...++.|.+||.. ++... .+......+.++++.+++.++++...++.|..||.. +...
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 34568999999999988777768899999988 55432 223344678999999999888887778899999988 5542
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEE-EecCCCcEEEEEEeCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGV-FKNFFESFVSVRVVQPR 695 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~-~~~h~~~VtsVaf~sPd 695 (695)
...+......+.++++.+++. ++++...++.|.+||. +++.... ...+...+..|++ +|+
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-d~~ 198 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITS-GND 198 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE-CTT
T ss_pred EccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEE-CCC
Confidence 223333456789999999988 6667666789999998 5554432 2234456778887 663
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.54 E-value=2.9e-05 Score=78.57 Aligned_cols=137 Identities=7% Similarity=-0.020 Sum_probs=98.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEE-EecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKS-TLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS 632 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~-~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~ 632 (695)
....+.++++.++|+++++...++.|.+||.. ++... .+......+.++++.++++++++...++.|.+||. ++...
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 34568999999999988877778899999987 55442 23334567899999999987777766889999998 44442
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEE-EecCCCcEEEEEEeCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGV-FKNFFESFVSVRVVQPR 695 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~-~~~h~~~VtsVaf~sPd 695 (695)
......+...+.+++++++|. ++++...++.|.+||. +++.... +..+...+.+|++ +|+
T Consensus 180 ~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-d~~ 240 (300)
T 2qc5_A 180 EYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA-GKN 240 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE-CST
T ss_pred EeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE-CCC
Confidence 222233456789999999986 6666666778999998 5554433 3344566788888 764
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.53 E-value=1.4e-05 Score=84.05 Aligned_cols=133 Identities=9% Similarity=-0.009 Sum_probs=94.0
Q ss_pred CeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECC--
Q 005473 557 KVESCHFSPDGKLLATGGH------DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADRTVRVWDTE-- 627 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~------Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTg-s~DgtIrvWDl~-- 627 (695)
.+.+++++++|+++++... .+.|..+| +++... +..+......++|+|+++.|+.+ +.++.|++||++
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~ 211 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDAR 211 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccc
Confidence 5889999999997766542 24455555 455433 33344567899999999876554 557899999986
Q ss_pred CC-Ce----eEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeC-CC
Q 005473 628 NP-DY----SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQ-PR 695 (695)
Q Consensus 628 t~-~~----~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~s-Pd 695 (695)
++ .. .+..+......+..++++++|. ++++...++.|.+||. +++.+..+..+...+++++| . |+
T Consensus 212 ~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af-~g~d 282 (326)
T 2ghs_A 212 TGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF-IGPD 282 (326)
T ss_dssp TCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE-ESTT
T ss_pred cCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE-ecCC
Confidence 44 21 1223333445678899999987 6656656788999998 67888888888778999999 6 54
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.51 E-value=1.4e-05 Score=84.11 Aligned_cols=132 Identities=11% Similarity=-0.012 Sum_probs=87.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecc---c-CCCeEEEEEcCCCCEEEEEeC------CCeEEEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE---H-TQWITDVRFSPSLSRLATSSA------DRTVRVWD 625 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~---H-~~~V~~v~~spdg~~LaTgs~------DgtIrvWD 625 (695)
..|.+++|+++|+++++. .+ .|.+||..+++....... . ...+.+++++|+|+++++... .+.|+.+|
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 468999999999877764 44 499999988776433321 1 246889999999987766542 24566666
Q ss_pred CCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC--CC-e-----EEEEEecCCCcEEEEEEeCC
Q 005473 626 TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN--NG-S-----CAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 626 l~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~--tg-~-----~v~~~~~h~~~VtsVaf~sP 694 (695)
++. +..+..+......++|+|+++.++++.+.++.|.+||+. ++ + .+..+......+..+++ ++
T Consensus 168 --~g~--~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~-d~ 239 (326)
T 2ghs_A 168 --KGK--VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVC-DA 239 (326)
T ss_dssp --TTE--EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEE-CT
T ss_pred --CCc--EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEE-CC
Confidence 333 333333334678999999998777777778999999986 56 3 22223223344456665 44
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.50 E-value=9.7e-06 Score=95.07 Aligned_cols=140 Identities=12% Similarity=0.052 Sum_probs=97.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--eEEEEecccCCCeEEEEEcCCCCEEEEEeC----CCe
Q 005473 552 PASTSKVESCHFSPDGKLLATGGHDK-----KAVLWCTESF--TVKSTLEEHTQWITDVRFSPSLSRLATSSA----DRT 620 (695)
Q Consensus 552 ~~H~~~V~~v~fspdg~~LaSgs~Dg-----~V~IWDl~t~--~~~~~l~~H~~~V~~v~~spdg~~LaTgs~----Dgt 620 (695)
..+...+..+.|+|||++|+..+.++ .|++||+.++ ++...+..+...+.... +|++..|+..+. ++.
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~ 342 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKK 342 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCE
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCE
Confidence 34444689999999999888877554 8999999877 31455655555555554 488888877765 345
Q ss_pred EEEEECCCC-CeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC-CCeEEEEEec-CCCcEEEEEEeCCC
Q 005473 621 VRVWDTENP-DYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN-NGSCAGVFKN-FFESFVSVRVVQPR 695 (695)
Q Consensus 621 IrvWDl~t~-~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~-tg~~v~~~~~-h~~~VtsVaf~sPd 695 (695)
|.+||+.++ ......+..+...+.+++|. +..++++...|+..+||.+. ++..+..+.. +.+.|..+.| +|+
T Consensus 343 l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~-s~d 417 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSG-RPG 417 (741)
T ss_dssp EEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEEC-CBT
T ss_pred EEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeec-CCC
Confidence 999999875 23234444455556677777 45688899999988887665 4667777764 3567778887 764
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.48 E-value=9.1e-06 Score=88.85 Aligned_cols=132 Identities=11% Similarity=0.060 Sum_probs=92.4
Q ss_pred EEEcCCCCEEEEEeCCC--cEEEEECCCCeEEEEe----cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEE
Q 005473 561 CHFSPDGKLLATGGHDK--KAVLWCTESFTVKSTL----EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLR 634 (695)
Q Consensus 561 v~fspdg~~LaSgs~Dg--~V~IWDl~t~~~~~~l----~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~ 634 (695)
++|++++++|+++..++ .|.+||..++.....+ ..+...+.+++++|++..|+.+..++.|+.||..++...+.
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 99999999999998866 7888888765544444 22456788999999655666677788999999987653221
Q ss_pred E---EecCCCCe-E-EEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCC---------------CcEEEEEEeCC
Q 005473 635 T---FTGHSTTV-M-SLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFF---------------ESFVSVRVVQP 694 (695)
Q Consensus 635 ~---~~gh~~~V-~-sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~---------------~~VtsVaf~sP 694 (695)
. ..++.... . .++|+|++..++++...++.|+.||.... +..+.++. .....|+| +|
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~-d~ 332 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTV-DE 332 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE-CT
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEE-eC
Confidence 1 22232333 3 99999976778888888899999997643 33333332 34678888 76
Q ss_pred C
Q 005473 695 R 695 (695)
Q Consensus 695 d 695 (695)
+
T Consensus 333 d 333 (409)
T 3hrp_A 333 D 333 (409)
T ss_dssp T
T ss_pred C
Confidence 4
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.48 E-value=2.1e-06 Score=100.17 Aligned_cols=127 Identities=11% Similarity=0.009 Sum_probs=91.1
Q ss_pred EEEEEcCCCCEEEEEeCCCc-------------EEEEECCCCeE--EEEe--cc-cCCCeEEEEEcCCCCEEEEEeC---
Q 005473 559 ESCHFSPDGKLLATGGHDKK-------------AVLWCTESFTV--KSTL--EE-HTQWITDVRFSPSLSRLATSSA--- 617 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~Dg~-------------V~IWDl~t~~~--~~~l--~~-H~~~V~~v~~spdg~~LaTgs~--- 617 (695)
..++|+ ||+.|+.++.|.. |++|++.+... +..+ .. |...+..+.|+||+++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 467899 9999998888754 99999977542 2333 33 5556889999999998755432
Q ss_pred -CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCC---CcEEEEECCCCeE--EEEEecCCCcEE
Q 005473 618 -DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN---SEIRYWSINNGSC--AGVFKNFFESFV 687 (695)
Q Consensus 618 -DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D---g~IriWDl~tg~~--v~~~~~h~~~Vt 687 (695)
+..|++||+.++......+..+...+... |+++|..+++....+ +.|.+||+.++.+ ...+..|...+.
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 331 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL 331 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE
Confidence 35899999987754456677777766665 677778788777654 6899999988755 345666655544
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.44 E-value=1.5e-05 Score=87.22 Aligned_cols=136 Identities=9% Similarity=0.007 Sum_probs=95.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEE----ecccCCCe-E-EEEEcCC-CCEEEEEeCCCeEEEEEC
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKST----LEEHTQWI-T-DVRFSPS-LSRLATSSADRTVRVWDT 626 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~----l~~H~~~V-~-~v~~spd-g~~LaTgs~DgtIrvWDl 626 (695)
+...+.+++++|++..|+.+..++.|+.||..++..... ..++.... . .++|+|+ +.++++-..++.|+.||.
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 445678999999555566677789999999987764332 22232222 3 9999995 555566667889999998
Q ss_pred CCCCeeEEEEecCC---------------CCeEEEEEecCCCeEEEEEe-CCCcEEEEECCCCeEEEEEecC--------
Q 005473 627 ENPDYSLRTFTGHS---------------TTVMSLDFHPSKEDLLCSCD-NNSEIRYWSINNGSCAGVFKNF-------- 682 (695)
Q Consensus 627 ~t~~~~l~~~~gh~---------------~~V~sl~fspdg~~llaSgs-~Dg~IriWDl~tg~~v~~~~~h-------- 682 (695)
+.. +..+.++. .....++|+++|. ++++-. .++.|+.||+.++.. .++.++
T Consensus 297 ~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~ 371 (409)
T 3hrp_A 297 DGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQID 371 (409)
T ss_dssp TCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCC
T ss_pred CCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCC
Confidence 753 34444432 3478999999998 777777 889999999887764 444443
Q ss_pred -------CCcEEEEEEeCCC
Q 005473 683 -------FESFVSVRVVQPR 695 (695)
Q Consensus 683 -------~~~VtsVaf~sPd 695 (695)
-.....|++ +|+
T Consensus 372 g~~~~~~~~~P~giav-d~~ 390 (409)
T 3hrp_A 372 GTPLEATFNYPYDICY-DGE 390 (409)
T ss_dssp BSTTTCCBSSEEEEEE-CSS
T ss_pred CChhceEeCCceEEEE-cCC
Confidence 234678888 764
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.44 E-value=7.7e-07 Score=103.86 Aligned_cols=134 Identities=16% Similarity=0.073 Sum_probs=93.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-----CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCe-------
Q 005473 553 ASTSKVESCHFSPDGKLLATGG-----HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRT------- 620 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~LaSgs-----~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~Dgt------- 620 (695)
+|...|..++|||||++||-+. .+..|+|||+.+++.+.... +......++|+ |++.|+.++.|..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3555688999999999887432 33679999999998654311 11113578899 9999988887743
Q ss_pred ------EEEEECCCCCe---eEEEEec-CCCCeEEEEEecCCCeEEEEEeCC---CcEEEEECCCCe-EEEEEecCCCcE
Q 005473 621 ------VRVWDTENPDY---SLRTFTG-HSTTVMSLDFHPSKEDLLCSCDNN---SEIRYWSINNGS-CAGVFKNFFESF 686 (695)
Q Consensus 621 ------IrvWDl~t~~~---~l~~~~g-h~~~V~sl~fspdg~~llaSgs~D---g~IriWDl~tg~-~v~~~~~h~~~V 686 (695)
|++|++.++.. ++..... |...+.++.|+|||+.++++.+.+ ..|++||+.++. +...+..+.+.+
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 99999987542 3333334 556688999999999887776533 589999998763 455555555544
Q ss_pred EE
Q 005473 687 VS 688 (695)
Q Consensus 687 ts 688 (695)
..
T Consensus 284 ~~ 285 (693)
T 3iuj_A 284 VS 285 (693)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.33 E-value=5.1e-08 Score=105.14 Aligned_cols=147 Identities=11% Similarity=-0.002 Sum_probs=77.6
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTE 585 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~ 585 (695)
+..+++++.|+.|..|+..++. .+-.+.. +.+.+..+..+++++++++.|+.|+.||..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~-------------------~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGS-------------------IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCC-------------------EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC---
T ss_pred CCEEEEEcCCCEEEEEECCCCC-------------------EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECC
Confidence 4778899999999999765442 1111112 234455555678788888899999999999
Q ss_pred CCeEEEEecccCC-CeE-EEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCC
Q 005473 586 SFTVKSTLEEHTQ-WIT-DVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 586 t~~~~~~l~~H~~-~V~-~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg 663 (695)
+++.+..+..+.. .+. +..+. .+..|++++.|+.|+.||.++++. +..+..+. .+.++|++. .+++++.|+
T Consensus 68 tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~-~w~~~~~~----~~~~~p~~~-~v~~~~~dg 140 (369)
T 2hz6_A 68 NNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEK-QQTLSSAF----ADSLSPSTS-LLYLGRTEY 140 (369)
T ss_dssp --CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEE
T ss_pred CCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcE-EEEecCCC----cccccccCC-EEEEEecCC
Confidence 9988777654421 111 01111 345788888899999999999875 55555443 234566666 555778899
Q ss_pred cEEEEECCCCeEEEEEe
Q 005473 664 EIRYWSINNGSCAGVFK 680 (695)
Q Consensus 664 ~IriWDl~tg~~v~~~~ 680 (695)
.|+.||.++|+.+..+.
T Consensus 141 ~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 141 TITMYDTKTRELRWNAT 157 (369)
T ss_dssp EEECCCSSSSSCCCEEE
T ss_pred EEEEEECCCCCEEEeEe
Confidence 99999999998765543
No 214
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.33 E-value=2.8e-05 Score=83.94 Aligned_cols=120 Identities=9% Similarity=0.019 Sum_probs=88.7
Q ss_pred EEEecCCCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEECCCCeEEEEeccc-------CCCeEEEEEcCCCC
Q 005473 548 FQLIPASTSKVESCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPSLS 610 (695)
Q Consensus 548 v~~l~~H~~~V~~v~fspdg~~LaSgs----------~Dg~V~IWDl~t~~~~~~l~~H-------~~~V~~v~~spdg~ 610 (695)
+..+.....+ .++|+|||++|+++. .++.|.+||..+.+.+..+... ......+.|+|||+
T Consensus 60 ~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~ 137 (373)
T 2mad_H 60 LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA 137 (373)
T ss_pred EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC
Confidence 3444443443 899999999999886 3678999999998887766421 12355899999999
Q ss_pred EEEEEeC--CCeEEEEECCCCCeeEEE-EecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEE
Q 005473 611 RLATSSA--DRTVRVWDTENPDYSLRT-FTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCA 676 (695)
Q Consensus 611 ~LaTgs~--DgtIrvWDl~t~~~~l~~-~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v 676 (695)
+|++++. +..|.++| .+++. +.. +.. . .|+.+.|+++..+++.+.||.+.+||. +++.+
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~~-~~~~i~~-~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGSS-DDQLLSS-P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCCE-EeEEcCC-C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 9998874 57899999 87664 555 432 1 235667887777778888999999999 77665
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.31 E-value=3.3e-05 Score=80.07 Aligned_cols=143 Identities=11% Similarity=0.080 Sum_probs=94.6
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
.++.++..++.|..|.. ++ .+..+..+...+.+++|+++|+++++...++.|.+||.+
T Consensus 58 ~l~~~d~~~~~i~~~~~-~g--------------------~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 58 TLVWSDLVGRRVLGWRE-DG--------------------TVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EEEEEETTTTEEEEEET-TS--------------------CEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred EEEEEECCCCEEEEEeC-CC--------------------CEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 46667777778877743 11 012223345568999999999977666666889999986
Q ss_pred CeEEEEeccc----CCCeEEEEEcCCCCEEEE----EeC-------------CCeEEEEECCCCCeeEEEEecCCCCeEE
Q 005473 587 FTVKSTLEEH----TQWITDVRFSPSLSRLAT----SSA-------------DRTVRVWDTENPDYSLRTFTGHSTTVMS 645 (695)
Q Consensus 587 ~~~~~~l~~H----~~~V~~v~~spdg~~LaT----gs~-------------DgtIrvWDl~t~~~~l~~~~gh~~~V~s 645 (695)
++........ ...+.++++.|+|++++| |.. .+.|+.||..+++... +. .......
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~--~~-~~~~p~g 192 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR--MA-DLDHPNG 192 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE--EE-EESSEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE--Ee-cCCCCcc
Confidence 5533222111 234678999999998887 332 2568888886655422 22 3346788
Q ss_pred EEEecCCCeEEEEEeC-----CCcEEEEECCCCe
Q 005473 646 LDFHPSKEDLLCSCDN-----NSEIRYWSINNGS 674 (695)
Q Consensus 646 l~fspdg~~llaSgs~-----Dg~IriWDl~tg~ 674 (695)
++|+||+..++++... ++.|++||+..+.
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 9999999866655543 2789999987654
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.30 E-value=1.3e-05 Score=84.88 Aligned_cols=124 Identities=12% Similarity=0.068 Sum_probs=88.6
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeEEEEe-------cccCCCeEEEEEcCCCCEEEEEeC-----CCeE
Q 005473 556 SKVESCHFSPDGKLLATGG--HDKKAVLWCTESFTVKSTL-------EEHTQWITDVRFSPSLSRLATSSA-----DRTV 621 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs--~Dg~V~IWDl~t~~~~~~l-------~~H~~~V~~v~~spdg~~LaTgs~-----DgtI 621 (695)
..+..|+++++|+++++.. .++.++||.+.+++.. .+ .+|-..+..|+++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5689999999999988864 2343556655455432 22 234568999999999876665543 5789
Q ss_pred EEEECCCCCeeEEEEec------CCCCeEEEEEecCCCeEEEEEe---CCCcEEEEECCCCeEEEEEec
Q 005473 622 RVWDTENPDYSLRTFTG------HSTTVMSLDFHPSKEDLLCSCD---NNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 622 rvWDl~t~~~~l~~~~g------h~~~V~sl~fspdg~~llaSgs---~Dg~IriWDl~tg~~v~~~~~ 681 (695)
.+||+.+++. +..+.. +...+..+++++++..++++.. .++.|.+||+.+++..+.+.+
T Consensus 96 ~~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 96 VAWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp EEEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred EEEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 9999998663 444432 2245689999987666777766 688999999998887776644
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.23 E-value=1e-05 Score=88.01 Aligned_cols=118 Identities=12% Similarity=-0.005 Sum_probs=93.2
Q ss_pred EEEcCCCCEEEEEeC-----CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEe----------CCCeEEEEE
Q 005473 561 CHFSPDGKLLATGGH-----DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS----------ADRTVRVWD 625 (695)
Q Consensus 561 v~fspdg~~LaSgs~-----Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs----------~DgtIrvWD 625 (695)
....|+++.++++.. ++.|.+.|..+++.+.++..-..+ . +.++||+++|++++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 455789998888876 679999999999999888654454 4 99999999887765 367899999
Q ss_pred CCCCCeeEEEEecC-------CCCeEEEEEecCCCeEEEEEe-CCCcEEEEECCCCeEEEEEec
Q 005473 626 TENPDYSLRTFTGH-------STTVMSLDFHPSKEDLLCSCD-NNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 626 l~t~~~~l~~~~gh-------~~~V~sl~fspdg~~llaSgs-~Dg~IriWDl~tg~~v~~~~~ 681 (695)
+.+.+. +.++.-. ......+.|+|||++++++.. .++.|.++|+.+++.+.++..
T Consensus 116 ~~t~~v-~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 116 PVTLLP-TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp TTTCCE-EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCeE-EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 999775 5555321 124567999999998887764 378999999999999888863
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.22 E-value=3.6e-07 Score=98.50 Aligned_cols=113 Identities=13% Similarity=0.025 Sum_probs=62.9
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEE
Q 005473 567 GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSL 646 (695)
Q Consensus 567 g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl 646 (695)
+..|++|+.|+.|+.||.++++.+..+..+. .+.++|++..|++++.|+.|+.||.++++. +..+..+. ....
T Consensus 92 ~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~-~W~~~~~~--~~~~ 164 (369)
T 2hz6_A 92 DGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL-RWNATYFD--YAAS 164 (369)
T ss_dssp ---CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSC-CCEEEEEE--ECCB
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE-EEeEeccc--ccCc
Confidence 4467788889999999999999988876554 245567888999999999999999998774 33332111 1223
Q ss_pred EEecCC---CeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEE
Q 005473 647 DFHPSK---EDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVS 688 (695)
Q Consensus 647 ~fspdg---~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~Vts 688 (695)
.+..+. . .++.++.||.|+.||.++|+.+..+... .+|..
T Consensus 165 ~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~ 207 (369)
T 2hz6_A 165 LPEDDVDYKM-SHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVA 207 (369)
T ss_dssp CCCCCTTCCC-CEEEEETSCEEEEECTTTCCEEEEEECS-SCEEE
T ss_pred cccCCccccc-eEEEECCCCEEEEEECCCCcEEEEecCC-CceEE
Confidence 333321 3 3446788999999999999998877643 34443
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.20 E-value=8.5e-05 Score=78.52 Aligned_cols=138 Identities=7% Similarity=-0.060 Sum_probs=92.8
Q ss_pred CCeEEEEEcCCCCEE-EEEe---CCCcEEEEECCCCeEEEEecccC-----------------------------CCeEE
Q 005473 556 SKVESCHFSPDGKLL-ATGG---HDKKAVLWCTESFTVKSTLEEHT-----------------------------QWITD 602 (695)
Q Consensus 556 ~~V~~v~fspdg~~L-aSgs---~Dg~V~IWDl~t~~~~~~l~~H~-----------------------------~~V~~ 602 (695)
..+..+++++++..+ ++.. .++.|.+||+.+++..+.+.+|. ..+..
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 456899999865554 4444 57899999999888777665431 13578
Q ss_pred EEEcCCCCEEEEEeCCC-eEEEEECC---CCCe----eE--EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 603 VRFSPSLSRLATSSADR-TVRVWDTE---NPDY----SL--RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 603 v~~spdg~~LaTgs~Dg-tIrvWDl~---t~~~----~l--~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
|+|+|+++.|+++..++ .|+.+|.. .+.. .. ....++.+....++++++|. ++++...++.|.+||..+
T Consensus 200 ia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~ 278 (343)
T 2qe8_A 200 IVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSAD 278 (343)
T ss_dssp EEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTT
T ss_pred eEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCC-EEEEccCCCeEEEEECCC
Confidence 99999999888887665 55555532 1110 00 01223445667799999986 777888899999999856
Q ss_pred CeEEEEEec-CCCcEEEEEEeCCC
Q 005473 673 GSCAGVFKN-FFESFVSVRVVQPR 695 (695)
Q Consensus 673 g~~v~~~~~-h~~~VtsVaf~sPd 695 (695)
++....... +...+++|+| .|+
T Consensus 279 G~~~~~~~~~~~~~p~~va~-~~~ 301 (343)
T 2qe8_A 279 RAYKLLVTDEKLSWTDSFNF-GSD 301 (343)
T ss_dssp TEEEEEEECGGGSCEEEEEE-CTT
T ss_pred CCEEEEEECCceecCCeeEE-CCC
Confidence 764433332 2456788998 764
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.18 E-value=2.6e-05 Score=80.79 Aligned_cols=138 Identities=8% Similarity=0.045 Sum_probs=96.1
Q ss_pred EEecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 005473 549 QLIPASTSKVESCHFSPDGK-LLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (695)
Q Consensus 549 ~~l~~H~~~V~~v~fspdg~-~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~ 627 (695)
..+..+........|+++|+ +++++..++.|..|+. +++ +..+..+...+..++++++|+++++...++.|.+||.+
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 33444555678999999998 6677777899999998 444 34555567789999999999877776667899999986
Q ss_pred CCCeeEEEEecC-----CCCeEEEEEecCCCeEEEE----EeC-------------CCcEEEEECCCCeEEEEEecCCCc
Q 005473 628 NPDYSLRTFTGH-----STTVMSLDFHPSKEDLLCS----CDN-------------NSEIRYWSINNGSCAGVFKNFFES 685 (695)
Q Consensus 628 t~~~~l~~~~gh-----~~~V~sl~fspdg~~llaS----gs~-------------Dg~IriWDl~tg~~v~~~~~h~~~ 685 (695)
+.. ..+..+ ...+..++++++|. ++++ |.. .+.|+.||..+++..... +...
T Consensus 116 -g~~--~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 116 -GQA--HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp -SCE--EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred -CCE--EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 443 222211 13467899999998 5555 321 256888888777654443 3345
Q ss_pred EEEEEEeCCC
Q 005473 686 FVSVRVVQPR 695 (695)
Q Consensus 686 VtsVaf~sPd 695 (695)
...++| +|+
T Consensus 190 p~gl~~-spd 198 (305)
T 3dr2_A 190 PNGLAF-SPD 198 (305)
T ss_dssp EEEEEE-CTT
T ss_pred CcceEE-cCC
Confidence 577888 875
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.17 E-value=2e-05 Score=85.18 Aligned_cols=88 Identities=5% Similarity=-0.104 Sum_probs=69.1
Q ss_pred EEEcCCCCEEEEEeC---------CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEe-CCCcEEEEECCC
Q 005473 603 VRFSPSLSRLATSSA---------DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCD-NNSEIRYWSINN 672 (695)
Q Consensus 603 v~~spdg~~LaTgs~---------DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs-~Dg~IriWDl~t 672 (695)
+.|+|++++++.+.. +..+.+||+.+.+. +..+.... ....++|+|||+.+++++. .++.|.++|+.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v-v~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT-SGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE-EECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE-EEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 678899888876533 23566999998775 55554332 5889999999998888888 699999999999
Q ss_pred CeEEEEEecCCCcEEEEEEeCC
Q 005473 673 GSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 673 g~~v~~~~~h~~~VtsVaf~sP 694 (695)
++.+.++..+..+ ..|+| ++
T Consensus 347 ~kvv~~I~vg~~P-~~i~~-~~ 366 (368)
T 1mda_H 347 DQDQSSVELDKGP-ESLSV-QN 366 (368)
T ss_dssp CEEEEECCCCSCC-CEEEC-CC
T ss_pred CcEEEEEECCCCC-CEEEe-ec
Confidence 9999999877655 67877 65
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.11 E-value=6.9e-05 Score=81.40 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=87.4
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEECCCCeEEEEeccc-------CCCeEEEEEcCC
Q 005473 546 TEFQLIPASTSKVESCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPS 608 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fspdg~~LaSgs----------~Dg~V~IWDl~t~~~~~~l~~H-------~~~V~~v~~spd 608 (695)
+.+..+.....+ . ++++|||++|+++. .++.|.+||..+.+.+..+.-. ......+.|+||
T Consensus 70 ~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 70 RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD 147 (386)
T ss_dssp EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT
T ss_pred eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCC
Confidence 344455544444 4 99999999888775 3678999999999988877432 124567999999
Q ss_pred CCEEEEEeC--CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC-CeE
Q 005473 609 LSRLATSSA--DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN-GSC 675 (695)
Q Consensus 609 g~~LaTgs~--DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t-g~~ 675 (695)
|++|+++.. ++.|.|+|+.+.+. +.++.-. . |..+.|.+...+++.+.||.+.+.++.+ ++.
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~v-v~tI~v~--g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKAF-KRMLDVP--D--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEE-EEEEECC--S--EEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred CCEEEEEEcCCCCeEEEEECCCCcE-EEEEECC--C--cceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 999988874 68999999999765 6666421 1 1223455544555667788888888875 554
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.06 E-value=5.3e-05 Score=81.88 Aligned_cols=80 Identities=8% Similarity=-0.070 Sum_probs=62.0
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEECCCCeEEEEeccc-------CCCeEEEEEcCC
Q 005473 546 TEFQLIPASTSKVESCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPS 608 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fspdg~~LaSgs----------~Dg~V~IWDl~t~~~~~~l~~H-------~~~V~~v~~spd 608 (695)
+.+.++.....+ .+.|+||+++++++. .++.|.+||+.+++.+.++..+ ......+.|+||
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD 134 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC
Confidence 445555554555 799999999988886 3788999999999999988643 134568999999
Q ss_pred CCEEEEEeC--CCeEEE--EECC
Q 005473 609 LSRLATSSA--DRTVRV--WDTE 627 (695)
Q Consensus 609 g~~LaTgs~--DgtIrv--WDl~ 627 (695)
|++|+++.. +..|.+ +|+.
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTE
T ss_pred CCEEEEEccCCCCeEEEEEEchh
Confidence 999988875 456888 8874
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.04 E-value=7.1e-05 Score=80.80 Aligned_cols=115 Identities=14% Similarity=-0.008 Sum_probs=86.0
Q ss_pred EEcCCCCEEEEEeC--CC---cEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEe----------CCCeEEEEEC
Q 005473 562 HFSPDGKLLATGGH--DK---KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS----------ADRTVRVWDT 626 (695)
Q Consensus 562 ~fspdg~~LaSgs~--Dg---~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs----------~DgtIrvWDl 626 (695)
...+++++++++.. .. +|.+||..+++.+..+.....+ .++++||+++|+.+. .++.|.+||+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34467887777653 22 8899999999988887654443 999999999998876 3678999999
Q ss_pred CCCCeeEEEEecC-------CCCeEEEEEecCCCeEEEEEeC-CCcEEEEECCCCeEEEE-Ee
Q 005473 627 ENPDYSLRTFTGH-------STTVMSLDFHPSKEDLLCSCDN-NSEIRYWSINNGSCAGV-FK 680 (695)
Q Consensus 627 ~t~~~~l~~~~gh-------~~~V~sl~fspdg~~llaSgs~-Dg~IriWDl~tg~~v~~-~~ 680 (695)
.+.+. +..+... ......+.|+|||++++++... ++.|.++| .+++.+.. +.
T Consensus 105 ~t~~~-~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 105 VTFLP-IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred CCCcE-EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 87664 4444321 1235689999999988866643 68899999 99988887 64
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.90 E-value=0.00036 Score=76.98 Aligned_cols=153 Identities=14% Similarity=0.178 Sum_probs=105.7
Q ss_pred CCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEec-------CCCCCeEEEEEcCCCCEEEEEeCC-
Q 005473 505 MDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIP-------ASTSKVESCHFSPDGKLLATGGHD- 576 (695)
Q Consensus 505 ~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~-------~H~~~V~~v~fspdg~~LaSgs~D- 576 (695)
.+.+++.|-.++.|.+++...+.. ..+.++++. .....-..++..|+| +++++..+
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~---------------~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~ 158 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPR---------------EPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE 158 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTT---------------SCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET
T ss_pred CCEEEEccCCCCeEEEEECCCCCC---------------CceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc
Confidence 446777788889999997643321 112222221 011123567888999 77777666
Q ss_pred -----CcEEEEECCCCeEEEEecccC---CCeEEEEEcCCCCEEEEEe-------------------CCCeEEEEECCCC
Q 005473 577 -----KKAVLWCTESFTVKSTLEEHT---QWITDVRFSPSLSRLATSS-------------------ADRTVRVWDTENP 629 (695)
Q Consensus 577 -----g~V~IWDl~t~~~~~~l~~H~---~~V~~v~~spdg~~LaTgs-------------------~DgtIrvWDl~t~ 629 (695)
+.|.++|.++.+.+.++.... ..-+++.|+|+++.++++. .+.+|.+||+.++
T Consensus 159 ~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 159 EGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp TSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 789999999999999886322 3345788999999888885 3689999999985
Q ss_pred CeeEEEEecC-C-CCeEEEEE--ecCCCeEEEEEe-----CCCcEEEEECCCCe
Q 005473 630 DYSLRTFTGH-S-TTVMSLDF--HPSKEDLLCSCD-----NNSEIRYWSINNGS 674 (695)
Q Consensus 630 ~~~l~~~~gh-~-~~V~sl~f--spdg~~llaSgs-----~Dg~IriWDl~tg~ 674 (695)
+ .+.++..- . .....|.| +|+++..++++- .+++|.+|..+.++
T Consensus 239 k-~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~ 291 (462)
T 2ece_A 239 K-RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK 291 (462)
T ss_dssp E-EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE
T ss_pred c-EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc
Confidence 4 36665532 1 23455655 999998888887 88899888776553
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.88 E-value=0.00015 Score=79.78 Aligned_cols=122 Identities=11% Similarity=0.109 Sum_probs=84.0
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEECCCCeEEEEeccc-------CCCeEEEEEcCC
Q 005473 546 TEFQLIPASTSKVESCHFSPDGKLLATGG----------HDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPS 608 (695)
Q Consensus 546 ~~v~~l~~H~~~V~~v~fspdg~~LaSgs----------~Dg~V~IWDl~t~~~~~~l~~H-------~~~V~~v~~spd 608 (695)
+.+..+.....+ .+.++|||++|+++. .++.|.++|..+.+.+..+.-- ......+.|+||
T Consensus 110 ~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spD 187 (426)
T 3c75_H 110 RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPD 187 (426)
T ss_dssp EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTT
T ss_pred EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCC
Confidence 344555544445 899999999888876 4678999999999988877421 234567899999
Q ss_pred CCEEEEEeC--CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCe
Q 005473 609 LSRLATSSA--DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGS 674 (695)
Q Consensus 609 g~~LaTgs~--DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~ 674 (695)
+++|+++.. ++.|.+.|+.+.+. +.++... .+ ....|++...+++.+.||.+.+.|..+++
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kv-v~~I~v~--g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTF-DRMLDVP--DC--YHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEE-EEEEECC--SE--EEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred CCEEEEEecCCCCeEEEEECCCCeE-EEEEEcC--Cc--eeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 999998874 57899999998765 5555531 11 33445544455555566666666664443
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.87 E-value=0.0016 Score=67.13 Aligned_cols=129 Identities=8% Similarity=0.033 Sum_probs=90.6
Q ss_pred EEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEe
Q 005473 559 ESCHFSPDGKLLATGG-HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFT 637 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs-~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~ 637 (695)
..+++. ++.|+.+. .++.|.++|..+.+.+.++..-... ...+++|+..|+++..+++|.++|..+.+. +..+.
T Consensus 69 eGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v-~~~I~ 143 (266)
T 2iwa_A 69 EGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKL-IKKHN 143 (266)
T ss_dssp EEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCE-EEEEE
T ss_pred EEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcE-EEEEE
Confidence 345554 44555544 5799999999999999888532111 233455777777777788999999998765 44433
Q ss_pred -cC----CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC-------------CCcEEEEEEeCCC
Q 005473 638 -GH----STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF-------------FESFVSVRVVQPR 695 (695)
Q Consensus 638 -gh----~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h-------------~~~VtsVaf~sPd 695 (695)
+. -..+..+.|. +| .+++....++.|.+.|..+++.+..+... ......|+| +|+
T Consensus 144 Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~-~~~ 216 (266)
T 2iwa_A 144 VKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAW-DQE 216 (266)
T ss_dssp CEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEE-ETT
T ss_pred ECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEE-cCC
Confidence 21 1246788888 66 57777777889999999999999998732 135588999 874
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.83 E-value=0.00012 Score=80.72 Aligned_cols=114 Identities=11% Similarity=0.005 Sum_probs=88.3
Q ss_pred CCCCEEEEEeCC-----CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEe----------CCCeEEEEECCCC
Q 005473 565 PDGKLLATGGHD-----KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS----------ADRTVRVWDTENP 629 (695)
Q Consensus 565 pdg~~LaSgs~D-----g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs----------~DgtIrvWDl~t~ 629 (695)
++++.++++... +.|.++|..+.+.+.++..-..+ .+.++||+++|+++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 467766666553 69999999999999988654455 899999999887775 3678999999987
Q ss_pred CeeEEEEecC-------CCCeEEEEEecCCCeEEEEEeC-CCcEEEEECCCCeEEEEEec
Q 005473 630 DYSLRTFTGH-------STTVMSLDFHPSKEDLLCSCDN-NSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 630 ~~~l~~~~gh-------~~~V~sl~fspdg~~llaSgs~-Dg~IriWDl~tg~~v~~~~~ 681 (695)
+. +..+.-. ......+.|+|||++++++... ++.|.+.|+.+++.+..+..
T Consensus 160 ~v-v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 160 LP-IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CE-EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred cE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 75 5554321 1235678999999988866543 68999999999999888874
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.83 E-value=0.0053 Score=61.77 Aligned_cols=135 Identities=7% Similarity=0.025 Sum_probs=90.8
Q ss_pred CCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECCCCCe
Q 005473 556 SKVESCHFSPDGKLLATGGH---DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADRTVRVWDTENPDY 631 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~---Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTg-s~DgtIrvWDl~t~~~ 631 (695)
.....+++++++..|+.+.. .+.|.+++++.................+++++++..|+.+ ...+.|.++|++....
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence 34689999997666666554 3688888886433222222333567899999987766554 4568999999985332
Q ss_pred eEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCC-CcEEEEEEeCCC
Q 005473 632 SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFF-ESFVSVRVVQPR 695 (695)
Q Consensus 632 ~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~-~~VtsVaf~sPd 695 (695)
...+.+ ......+++. +..++++...++.|.++|..+++.+..+.... .....|++ .|+
T Consensus 202 -~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~-~~~ 261 (267)
T 1npe_A 202 -RKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITI-ALS 261 (267)
T ss_dssp -EEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEE-ECS
T ss_pred -EEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeee-cCc
Confidence 223332 2345666654 56677777778999999999999999987543 23577887 664
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.83 E-value=0.0068 Score=60.97 Aligned_cols=122 Identities=7% Similarity=0.000 Sum_probs=83.3
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC---CCeEEEEECCCCCe
Q 005473 556 SKVESCHFSPDGKLLATGG-HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA---DRTVRVWDTENPDY 631 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~---DgtIrvWDl~t~~~ 631 (695)
....++++++++..|+.+. .++.|.++|++.......+.........++++|++..|+.+.. .+.|.+++++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 4578999999766555554 5688999998754333233222246789999997666655543 36898999875332
Q ss_pred eEEEE-ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEE
Q 005473 632 SLRTF-TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF 679 (695)
Q Consensus 632 ~l~~~-~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~ 679 (695)
..+ .........++|++++..++++....+.|.++|+........+
T Consensus 159 --~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 159 --RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL 205 (267)
T ss_dssp --EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE
T ss_pred --EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe
Confidence 222 2233467899999998888888888899999999754433333
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.79 E-value=0.00095 Score=68.48 Aligned_cols=123 Identities=11% Similarity=0.123 Sum_probs=87.0
Q ss_pred CCCEEEEEe-CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecC--C--
Q 005473 566 DGKLLATGG-HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGH--S-- 640 (695)
Q Consensus 566 dg~~LaSgs-~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh--~-- 640 (695)
++..|+.+. .++.+.+||..+.+.+.++..... =..++ +++..|+.+..++.|+++|..+.+. +..+... .
T Consensus 95 ~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T~~v-~~~I~V~~~g~~ 170 (262)
T 3nol_A 95 WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPESLTP-VRTITVTAHGEE 170 (262)
T ss_dssp ETTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTTCSE-EEEEECEETTEE
T ss_pred eCCEEEEEEeeCCEEEEEECccCcEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCCCeE-EEEEEeccCCcc
Confidence 355555555 489999999999999988864221 12333 4667777666678899999998775 4443321 1
Q ss_pred -CCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC------------CCcEEEEEEeCCC
Q 005473 641 -TTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF------------FESFVSVRVVQPR 695 (695)
Q Consensus 641 -~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h------------~~~VtsVaf~sPd 695 (695)
..+..+.|. +| .+++..-.+..|.+.|..+|+.+..+... .+....||| +|+
T Consensus 171 ~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~-dp~ 235 (262)
T 3nol_A 171 LPELNELEWV-DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAW-DKE 235 (262)
T ss_dssp CCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEE-ETT
T ss_pred ccccceeEEE-CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEE-cCC
Confidence 334567776 66 47777777889999999999999988742 135588999 874
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.74 E-value=0.001 Score=73.35 Aligned_cols=123 Identities=13% Similarity=0.162 Sum_probs=88.9
Q ss_pred eEEEEEcCCCCEEEEEe-------------------CCCcEEEEECCCCeEEEEeccc--CCCeEEEEE--cCCCCEEEE
Q 005473 558 VESCHFSPDGKLLATGG-------------------HDKKAVLWCTESFTVKSTLEEH--TQWITDVRF--SPSLSRLAT 614 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs-------------------~Dg~V~IWDl~t~~~~~~l~~H--~~~V~~v~~--spdg~~LaT 614 (695)
-+.+.|+|+++.+++.. .+.+|.+||+.+++.+.++..- ......|+| +|+++++++
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEE
Confidence 45688999999888885 4789999999998888777532 234556766 999998877
Q ss_pred Ee------CCCeEEEEECCCCCee-EEEE--ec----------------CCCCeEEEEEecCCCeEEEEEeCCCcEEEEE
Q 005473 615 SS------ADRTVRVWDTENPDYS-LRTF--TG----------------HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWS 669 (695)
Q Consensus 615 gs------~DgtIrvWDl~t~~~~-l~~~--~g----------------h~~~V~sl~fspdg~~llaSgs~Dg~IriWD 669 (695)
++ .+++|.+|..+.+... +.++ .. -...+..|.+++||+.|+++.-..+.|.+||
T Consensus 270 ~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavfd 349 (462)
T 2ece_A 270 NMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYD 349 (462)
T ss_dssp EEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 76 5668888776653321 1111 10 0245788999999999998888899999999
Q ss_pred CC---CCeEEEEEe
Q 005473 670 IN---NGSCAGVFK 680 (695)
Q Consensus 670 l~---tg~~v~~~~ 680 (695)
+. +.+.+..+.
T Consensus 350 V~d~~~~~lv~~I~ 363 (462)
T 2ece_A 350 ISNPFKPVLTGKVK 363 (462)
T ss_dssp CSSTTSCEEEEEEE
T ss_pred ecCCCCcEEEEEEE
Confidence 85 245666665
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.73 E-value=0.00077 Score=78.65 Aligned_cols=115 Identities=10% Similarity=0.103 Sum_probs=82.5
Q ss_pred CCCC---EEEEEeCCCcEEEEECCCCeEEEEecccC-CC---------------------------e-----------EE
Q 005473 565 PDGK---LLATGGHDKKAVLWCTESFTVKSTLEEHT-QW---------------------------I-----------TD 602 (695)
Q Consensus 565 pdg~---~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~-~~---------------------------V-----------~~ 602 (695)
.+|+ .|+.++.+|.|+++|.++++.+....... .. + ..
T Consensus 314 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~ 393 (689)
T 1yiq_A 314 IDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQP 393 (689)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSC
T ss_pred cCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCc
Confidence 3565 78899999999999999999875432110 00 0 12
Q ss_pred EEEcCCCCEEEEEeC---------------------------------------------CCeEEEEECCCCCeeEEEEe
Q 005473 603 VRFSPSLSRLATSSA---------------------------------------------DRTVRVWDTENPDYSLRTFT 637 (695)
Q Consensus 603 v~~spdg~~LaTgs~---------------------------------------------DgtIrvWDl~t~~~~l~~~~ 637 (695)
++|+|+..+|++... +|+|+.||+.+++. +..+.
T Consensus 394 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~-~W~~~ 472 (689)
T 1yiq_A 394 MSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA-AWEVP 472 (689)
T ss_dssp CEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE-EEEEE
T ss_pred ceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe-EeEcc
Confidence 678888777776521 37899999999875 55555
Q ss_pred cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 638 GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 638 gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
.+. .+....+...+. +++.|+.||.|++||.++|+.+..++.+
T Consensus 473 ~~~-~~~~g~~~tagg-lvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 473 YVT-IFNGGTLSTAGN-LVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp ESS-SCCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCC-CccCccceECCC-EEEEECCCCcEEEEECCCCccceeeeCC
Confidence 443 233345556666 6668899999999999999999998854
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.73 E-value=0.001 Score=68.43 Aligned_cols=162 Identities=9% Similarity=0.014 Sum_probs=107.0
Q ss_pred cEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 005473 507 RFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTES 586 (695)
Q Consensus 507 ~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t 586 (695)
.+..+.+.++.|+.++...+.. ...+ +.. ...-..+++.. +++.+..-.++.+.+||..+
T Consensus 66 ~Ly~stG~~g~v~~iD~~Tgkv----------------~~~~--l~~-~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~T 125 (268)
T 3nok_A 66 HFFESTGHQGTLRQLSLESAQP----------------VWME--RLG-NIFAEGLASDG-ERLYQLTWTEGLLFTWSGMP 125 (268)
T ss_dssp EEEEEETTTTEEEECCSSCSSC----------------SEEE--ECT-TCCEEEEEECS-SCEEEEESSSCEEEEEETTT
T ss_pred EEEEEcCCCCEEEEEECCCCcE----------------EeEE--CCC-CcceeEEEEeC-CEEEEEEccCCEEEEEECCc
Confidence 6667777777888886544321 1122 222 11123355532 34444444689999999999
Q ss_pred CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEec--CC---CCeEEEEEecCCCeEEEEEeC
Q 005473 587 FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTG--HS---TTVMSLDFHPSKEDLLCSCDN 661 (695)
Q Consensus 587 ~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~g--h~---~~V~sl~fspdg~~llaSgs~ 661 (695)
.+.+.++..-. .-..++ +++..|+.+..++.|+++|..+.+. +..+.. +. ..+..+.|. +| .+++..-.
T Consensus 126 l~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v-~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~ 199 (268)
T 3nok_A 126 PQRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL-VGAVQVKLRGQPVELINELECA-NG-VIYANIWH 199 (268)
T ss_dssp TEEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred CcEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeE-EEEEEeCCCCcccccccccEEe-CC-EEEEEECC
Confidence 99999886422 223444 4577887777789999999998775 444332 21 245677877 66 47777767
Q ss_pred CCcEEEEECCCCeEEEEEecC-------------CCcEEEEEEeCCC
Q 005473 662 NSEIRYWSINNGSCAGVFKNF-------------FESFVSVRVVQPR 695 (695)
Q Consensus 662 Dg~IriWDl~tg~~v~~~~~h-------------~~~VtsVaf~sPd 695 (695)
+..|.+.|..+|+.+..+... .+....||| +|+
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~-dp~ 245 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAV-EPG 245 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEE-CTT
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEE-cCC
Confidence 889999999999999988732 135688999 874
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.72 E-value=0.0006 Score=79.43 Aligned_cols=120 Identities=8% Similarity=0.025 Sum_probs=87.2
Q ss_pred EEEcCCC---CEEEEEeCCCcEEEEECCCCeEEEEecccC-----------CCe------------------------EE
Q 005473 561 CHFSPDG---KLLATGGHDKKAVLWCTESFTVKSTLEEHT-----------QWI------------------------TD 602 (695)
Q Consensus 561 v~fspdg---~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~-----------~~V------------------------~~ 602 (695)
+....+| .+|+.++.+|.|+++|.++++.+..+.... .++ ..
T Consensus 318 ~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~ 397 (677)
T 1kb0_A 318 ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHP 397 (677)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSC
T ss_pred EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCC
Confidence 3444477 689999999999999999999887664221 111 14
Q ss_pred EEEcCCCCEEEEEeC-------------------------------------------CCeEEEEECCCCCeeEEEEecC
Q 005473 603 VRFSPSLSRLATSSA-------------------------------------------DRTVRVWDTENPDYSLRTFTGH 639 (695)
Q Consensus 603 v~~spdg~~LaTgs~-------------------------------------------DgtIrvWDl~t~~~~l~~~~gh 639 (695)
++|+|+..++++... .+.|..||+.+++. +..+. +
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~-~W~~~-~ 475 (677)
T 1kb0_A 398 MSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA-AWSVE-H 475 (677)
T ss_dssp CEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE-EEEEE-E
T ss_pred ceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE-EeecC-C
Confidence 688898888877542 27899999999775 44444 3
Q ss_pred CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCC
Q 005473 640 STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFF 683 (695)
Q Consensus 640 ~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~ 683 (695)
...+....+..++. +++.++.||.|++||.++|+++..+....
T Consensus 476 ~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 476 VSPWNGGTLTTAGN-VVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp SSSCCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCcCcceEeCCC-EEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 33455555667776 55578999999999999999999998443
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.67 E-value=0.00063 Score=77.36 Aligned_cols=135 Identities=9% Similarity=0.012 Sum_probs=98.5
Q ss_pred CeEEEEE-c-CCCCEEEEEe------------------CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEe
Q 005473 557 KVESCHF-S-PDGKLLATGG------------------HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS 616 (695)
Q Consensus 557 ~V~~v~f-s-pdg~~LaSgs------------------~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs 616 (695)
.+..+++ + |+++++++++ .++.|.+.|.++.+.+..+.--. ....++++|+|+++++.+
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence 3778888 5 8999998885 34689999999999888876322 456788999999998888
Q ss_pred CCC--------------------------------------eEEEEECCC--CCeeEEEEecCCCCeEEEEEecCCCeEE
Q 005473 617 ADR--------------------------------------TVRVWDTEN--PDYSLRTFTGHSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 617 ~Dg--------------------------------------tIrvWDl~t--~~~~l~~~~gh~~~V~sl~fspdg~~ll 656 (695)
.+. .|.|.|.++ ++..+..+.. .....++.++|||++++
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~ 292 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLC 292 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEE
Confidence 553 367777776 3321333322 12456799999999999
Q ss_pred EEEeCCCcEEEEECCCCe------------EEEEEecCCCcEEEEEEeCCC
Q 005473 657 CSCDNNSEIRYWSINNGS------------CAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 657 aSgs~Dg~IriWDl~tg~------------~v~~~~~h~~~VtsVaf~sPd 695 (695)
+++..+..|.++|+.+.+ .+..+....+ ...++| +|+
T Consensus 293 V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g-P~h~aF-~~d 341 (595)
T 1fwx_A 293 VAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG-PLHTAF-DGR 341 (595)
T ss_dssp EECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC-EEEEEE-CTT
T ss_pred EeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC-cceEEE-CCC
Confidence 999999999999998653 3445544444 477888 875
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.61 E-value=0.0025 Score=65.68 Aligned_cols=132 Identities=8% Similarity=0.025 Sum_probs=88.6
Q ss_pred eeeeEEEecCCC-CCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEEeccc-CCCeEEEEEcCCCCEEE-EEeCC
Q 005473 544 TFTEFQLIPAST-SKVESCHFSPDGKLLATGGH--DKKAVLWCTESFTVKSTLEEH-TQWITDVRFSPSLSRLA-TSSAD 618 (695)
Q Consensus 544 ~~~~v~~l~~H~-~~V~~v~fspdg~~LaSgs~--Dg~V~IWDl~t~~~~~~l~~H-~~~V~~v~~spdg~~La-Tgs~D 618 (695)
..+.+.++.... .....+.|++++.++++.+. ++.|+++|+.+++.+..+.-. ......+++. +..|+ +.-.+
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred CceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 334555553222 23579999998765555543 589999999999998887421 2233355555 44554 44568
Q ss_pred CeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 619 RTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 619 gtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
+.|.++|..+.+. +.++..-...- ..+++||..++++. .++.|+++|..+.+.+..+..
T Consensus 86 ~~v~viD~~t~~v-~~~i~~g~~~g--~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 86 NIGFIYDRRTLSN-IKNFTHQMKDG--WGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp SEEEEEETTTTEE-EEEEECCSSSC--CEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEECCCCcE-EEEEECCCCCe--EEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEE
Confidence 8999999998664 66664221222 33566888788665 588999999999888888773
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.61 E-value=0.0011 Score=68.15 Aligned_cols=118 Identities=13% Similarity=0.031 Sum_probs=81.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEE
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLR 634 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~ 634 (695)
...+.++...+++. |+.++.++.|..||.. ++.+..+......+.++.+.+++.+++ ++ +.|..|| .++.. +.
T Consensus 136 ~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~-~~ 208 (330)
T 3hxj_A 136 KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTE-KW 208 (330)
T ss_dssp SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCE-EE
T ss_pred CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcE-EE
Confidence 33456667777777 5567778999999998 777777765566777888877776544 44 7899999 55554 45
Q ss_pred EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 635 TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
.+......+.++.+.++|. ++ .++.++.|..+|. +++.+..+...
T Consensus 209 ~~~~~~~~~~~~~~~~~g~-l~-v~t~~~gl~~~~~-~g~~~~~~~~~ 253 (330)
T 3hxj_A 209 NFYAGYWTVTRPAISEDGT-IY-VTSLDGHLYAINP-DGTEKWRFKTG 253 (330)
T ss_dssp EECCSSCCCSCCEECTTSC-EE-EEETTTEEEEECT-TSCEEEEEECS
T ss_pred EEccCCcceeceEECCCCe-EE-EEcCCCeEEEECC-CCCEeEEeeCC
Confidence 5554556688888888876 44 4566788888874 56666655543
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.57 E-value=0.0072 Score=61.29 Aligned_cols=122 Identities=11% Similarity=0.094 Sum_probs=86.0
Q ss_pred CCEEEE-EeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEec--CC---
Q 005473 567 GKLLAT-GGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTG--HS--- 640 (695)
Q Consensus 567 g~~LaS-gs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~g--h~--- 640 (695)
+..|+. .-.++.+.+||..+.+.+.++..... =..++ +++..|+.+..++.|+++|..+.+. +.++.. +.
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~-~~~I~V~~~g~~~ 149 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQ-VGSIKVTAGGRPL 149 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCE-EEEEECEETTEEC
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeE-EEEEEEccCCccc
Confidence 444444 44589999999999999998864322 23444 4566777666788999999998765 444432 11
Q ss_pred CCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC-------------CCcEEEEEEeCCC
Q 005473 641 TTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF-------------FESFVSVRVVQPR 695 (695)
Q Consensus 641 ~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h-------------~~~VtsVaf~sPd 695 (695)
..+..+.|. +|. +++..-.+..|.+.|.++|+.+..+... .+..+.||| +|+
T Consensus 150 ~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~-d~~ 214 (243)
T 3mbr_X 150 DNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAF-DAE 214 (243)
T ss_dssp CCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEE-ETT
T ss_pred ccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEE-cCC
Confidence 345667766 554 7777767889999999999999988722 135588999 874
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.53 E-value=0.0016 Score=66.91 Aligned_cols=126 Identities=10% Similarity=-0.027 Sum_probs=85.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEE
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLR 634 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~ 634 (695)
...+.++.+.+++.+++. + +.|..|| .+++.+..+......+.++.+.+++. |..++.++.|..+|.. +.. +.
T Consensus 176 ~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~-g~~-~~ 248 (330)
T 3hxj_A 176 DAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD-GTE-KW 248 (330)
T ss_dssp SCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT-SCE-EE
T ss_pred CCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC-CCE-eE
Confidence 345677778778875544 4 7799999 77777777766667788888888764 5556678888888853 343 45
Q ss_pred EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEE
Q 005473 635 TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVR 690 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVa 690 (695)
.+......+.++.+.+++. ++ .++.+|.|..+|. +++.+..+......+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~g~-l~-v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~ 301 (330)
T 3hxj_A 249 RFKTGKRIESSPVIGNTDT-IY-FGSYDGHLYAINP-DGTEKWNFETGSWIIATPV 301 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EE-EECTTCEEEEECT-TSCEEEEEECSSCCCSCCE
T ss_pred EeeCCCCccccceEcCCCe-EE-EecCCCCEEEECC-CCcEEEEEEcCCccccceE
Confidence 5554444455566666665 44 6777889999995 6777776664444444443
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.47 E-value=0.0023 Score=65.67 Aligned_cols=129 Identities=12% Similarity=0.086 Sum_probs=87.0
Q ss_pred eeeEEEecCCCC--CeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEE-eCCC
Q 005473 545 FTEFQLIPASTS--KVESCHFSPDGKLLATGGHDK--KAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADR 619 (695)
Q Consensus 545 ~~~v~~l~~H~~--~V~~v~fspdg~~LaSgs~Dg--~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTg-s~Dg 619 (695)
+..+.++ .|.. ....+.|+ ++.++.+++.+| .|+++|+.+++.+..+.-.. .+......+++..|+.. -.++
T Consensus 31 ~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 31 YQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSS
T ss_pred eEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCC
Confidence 3444555 3433 34788998 777777777776 89999999999988875432 33332222334555444 4588
Q ss_pred eEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 620 TVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 620 tIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
.+.+||..+.+. +.++.... .-..+ ++++..++++-+ ++.|+++|..+.+.+..+..
T Consensus 108 ~v~v~D~~t~~~-~~ti~~~~-eG~gl--t~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 108 LGFVWNIRNLRQ-VRSFNYDG-EGWGL--THNDQYLIMSDG-TPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEEEETTTCCE-EEEEECSS-CCCCE--EECSSCEEECCS-SSEEEEECTTTCSEEEEEEC
T ss_pred EEEEEECccCcE-EEEEECCC-CceEE--ecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEe
Confidence 999999998775 66666422 22333 456777776654 78899999999888887764
No 242
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.43 E-value=0.00079 Score=79.27 Aligned_cols=114 Identities=10% Similarity=0.073 Sum_probs=78.2
Q ss_pred CeEEEEEc-CCCCEEEEEeC-CC----cEEEEECCCC-eEEE-EecccCCCeEEEEEcCCCCEEEEEeCC-----CeEEE
Q 005473 557 KVESCHFS-PDGKLLATGGH-DK----KAVLWCTESF-TVKS-TLEEHTQWITDVRFSPSLSRLATSSAD-----RTVRV 623 (695)
Q Consensus 557 ~V~~v~fs-pdg~~LaSgs~-Dg----~V~IWDl~t~-~~~~-~l~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrv 623 (695)
.+...+|| |||++||-+.. +| .|+|+|+.++ +.+. .+. .....++|+||++.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99998775443 33 4999999988 6321 111 123468899999888776655 25888
Q ss_pred EECCCCCe-eEEEEe-cCCCCeEEEEEecCCCeEEEEEeC--CCcEEEEECCCC
Q 005473 624 WDTENPDY-SLRTFT-GHSTTVMSLDFHPSKEDLLCSCDN--NSEIRYWSINNG 673 (695)
Q Consensus 624 WDl~t~~~-~l~~~~-gh~~~V~sl~fspdg~~llaSgs~--Dg~IriWDl~tg 673 (695)
+++.++.. .+..+. .......++.|+|||+.|+++... ...|+++|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 89887532 122332 233456789999999988776643 456888999875
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.40 E-value=0.0019 Score=75.18 Aligned_cols=93 Identities=6% Similarity=0.092 Sum_probs=68.6
Q ss_pred CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEe-cCCCCeEEEEEecCCCeE
Q 005473 577 KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFT-GHSTTVMSLDFHPSKEDL 655 (695)
Q Consensus 577 g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~-gh~~~V~sl~fspdg~~l 655 (695)
+.|..||+.+++.+..+.. ...+....+..++.++++++.|+.|++||+++++. +..+. ++.....-+.|..+|+.+
T Consensus 457 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~-lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK-LWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEEEEETTEEE
T ss_pred cEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce-eeeeeCCCCcccCCEEEEeCCEEE
Confidence 7899999999999888763 34455555667788999999999999999999886 66655 343344566777888866
Q ss_pred EEEEeC----------------CCcEEEEECC
Q 005473 656 LCSCDN----------------NSEIRYWSIN 671 (695)
Q Consensus 656 laSgs~----------------Dg~IriWDl~ 671 (695)
++..+. .+.|.+|.+.
T Consensus 535 v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 535 VSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp EEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred EEEeccCCccccccccccccCCCCeEEEEecc
Confidence 655433 3567777765
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.40 E-value=0.019 Score=59.52 Aligned_cols=113 Identities=7% Similarity=0.006 Sum_probs=75.6
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEec---c-cCCCeEEEEEcC-CCCEEEEEeC-------------
Q 005473 557 KVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLE---E-HTQWITDVRFSP-SLSRLATSSA------------- 617 (695)
Q Consensus 557 ~V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~---~-H~~~V~~v~~sp-dg~~LaTgs~------------- 617 (695)
.+.++++.+ +++ |+.+...+.|.++|..++....... + .......+++.+ +|.++++-..
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 478899997 555 5555555568888877654322111 1 123578899999 8887776532
Q ss_pred ----CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 618 ----DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 618 ----DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
++.|..||..++.. ..+.........|+|+|++..++++-..++.|++||+..
T Consensus 160 ~~~~~g~v~~~d~~~~~~--~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKET--TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HTCCCEEEEEEETTTTEE--EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ccCCCceEEEEeCCCCEE--EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 36799999876543 222211234567999999987777777778999999874
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.38 E-value=0.0073 Score=63.78 Aligned_cols=109 Identities=8% Similarity=-0.011 Sum_probs=74.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCe--
Q 005473 566 DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTV-- 643 (695)
Q Consensus 566 dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V-- 643 (695)
++..|+.++.|+.|..+|..+++.+................ +..++.++.++.|..+|.++++. +..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~~~~~~~~ 178 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAV-KWTVNLDMPSLSL 178 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCE-EEEEECCC-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcE-EEEEeCCCCceee
Confidence 45678888899999999999999887775443222222222 45888888999999999998875 44443322111
Q ss_pred ---EEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe
Q 005473 644 ---MSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 644 ---~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~ 680 (695)
...... + . .++.++.++.|..+|..+|+.+..+.
T Consensus 179 ~~~~~~~~~-~-~-~v~~g~~~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 179 RGESAPTTA-F-G-AAVVGGDNGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp CCCCCCEEE-T-T-EEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred cCCCCcEEE-C-C-EEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 222223 3 3 34567789999999999998887665
No 246
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.26 E-value=0.0043 Score=72.29 Aligned_cols=104 Identities=8% Similarity=0.072 Sum_probs=73.9
Q ss_pred CCcEEEEECCCCeEEEEeccc-------------------------------CCCeEEEEEcCCCCEEEEEeCCCe----
Q 005473 576 DKKAVLWCTESFTVKSTLEEH-------------------------------TQWITDVRFSPSLSRLATSSADRT---- 620 (695)
Q Consensus 576 Dg~V~IWDl~t~~~~~~l~~H-------------------------------~~~V~~v~~spdg~~LaTgs~Dgt---- 620 (695)
|+.|+.||.++++.+..+... ......++++|+..+|+.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 789999999999998877421 001125788898889999887764
Q ss_pred ---------------EEEEECCCCCeeEEEEec--CC-------CCeEEEEEecCCC--eEEEEEeCCCcEEEEECCCCe
Q 005473 621 ---------------VRVWDTENPDYSLRTFTG--HS-------TTVMSLDFHPSKE--DLLCSCDNNSEIRYWSINNGS 674 (695)
Q Consensus 621 ---------------IrvWDl~t~~~~l~~~~g--h~-------~~V~sl~fspdg~--~llaSgs~Dg~IriWDl~tg~ 674 (695)
|..||.++++. +..+.. |. ..+...++..+|. .+++.++.+|.|+++|.++|+
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~-~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEY-VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCCCCceeeeeEEEEEccCCce-eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 99999999885 555543 32 1222233333553 367789999999999999999
Q ss_pred EEEEEe
Q 005473 675 CAGVFK 680 (695)
Q Consensus 675 ~v~~~~ 680 (695)
.+...+
T Consensus 341 ~l~~~~ 346 (689)
T 1yiq_A 341 LLSAKG 346 (689)
T ss_dssp EEEEEE
T ss_pred Eecccc
Confidence 986544
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.24 E-value=0.012 Score=59.66 Aligned_cols=129 Identities=12% Similarity=0.032 Sum_probs=86.6
Q ss_pred eeeEEEecCCC--CCeEEEEEcCCCCEEEEEeCC--CcEEEEECCCCeEEEEecccCCC-eEEEEEcCCCCEEEEEeCCC
Q 005473 545 FTEFQLIPAST--SKVESCHFSPDGKLLATGGHD--KKAVLWCTESFTVKSTLEEHTQW-ITDVRFSPSLSRLATSSADR 619 (695)
Q Consensus 545 ~~~v~~l~~H~--~~V~~v~fspdg~~LaSgs~D--g~V~IWDl~t~~~~~~l~~H~~~-V~~v~~spdg~~LaTgs~Dg 619 (695)
...+..+ .|. ..+..+.|+. +.++.+.+.+ ..|+++|+.+++.+..+.-.... -..+++.. +++.+..-.++
T Consensus 9 ~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~ 85 (243)
T 3mbr_X 9 YRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSS
T ss_pred eEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCC
Confidence 3444555 444 3466899986 6667777765 48999999999998877533221 12344432 33444455689
Q ss_pred eEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 620 TVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 620 tIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
.+.+||.++.+. +.++... ..-..++ +++..+++|- .++.|+++|..+.+.+..+..
T Consensus 86 ~v~v~D~~tl~~-~~ti~~~-~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 86 EGFVYDLATLTP-RARFRYP-GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEEETTTTEE-EEEEECS-SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEECCcCcE-EEEEeCC-CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEE
Confidence 999999998764 6666632 2334444 5677777665 488999999999988888774
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.19 E-value=0.07 Score=56.50 Aligned_cols=115 Identities=8% Similarity=-0.033 Sum_probs=79.5
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEE-eCC-CeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLL-ATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SAD-RTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~L-aSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTg-s~D-gtIrvWDl~t~~~~l 633 (695)
....+++.+.+..| ++-...+.|.+.+++.......+...-.....|+++|.+..|+.+ ..+ +.|..++++....
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-- 194 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-- 194 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc--
Confidence 45788998755544 454556889999987654444444444567899999966655544 444 7899999875332
Q ss_pred EEE-ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 634 RTF-TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 634 ~~~-~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
..+ ...-.....|+|+|++..|+++-...+.|..+|+...
T Consensus 195 ~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 195 RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 333 2223457899999988878878777889999998743
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.19 E-value=0.0025 Score=65.51 Aligned_cols=115 Identities=13% Similarity=0.057 Sum_probs=82.5
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCe--EEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEE
Q 005473 558 VESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWI--TDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V--~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~ 635 (695)
...+.|+ ++.++++.+.+|.|+++|+++++.+..+ -. ... ..+++.. +++.+..-.++.+.+||..+.+. +.+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~-~~t 131 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQR-ERT 131 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEE-EEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcE-EEE
Confidence 5688887 4677788888899999999999988777 22 233 3355543 34445555789999999998765 666
Q ss_pred EecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 636 FTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 636 ~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
+... ..-+.++ +|+..|+++- .++.|+++|..+.+.+..+..
T Consensus 132 i~~~-~eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 132 TRYS-GEGWGLC--YWNGKLVRSD-GGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EECS-SCCCCEE--EETTEEEEEC-SSSEEEEECTTTCCEEEEEEC
T ss_pred EeCC-CceeEEe--cCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEe
Confidence 6642 2334444 5677677665 588999999999988888774
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.15 E-value=0.002 Score=73.33 Aligned_cols=105 Identities=11% Similarity=0.110 Sum_probs=74.5
Q ss_pred cEEEEECCC--CeE-EEEecccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCCCCe----------eEEEEecCCCCe
Q 005473 578 KAVLWCTES--FTV-KSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDTENPDY----------SLRTFTGHSTTV 643 (695)
Q Consensus 578 ~V~IWDl~t--~~~-~~~l~~H~~~V~~v~~spdg~~LaTgs-~DgtIrvWDl~t~~~----------~l~~~~gh~~~V 643 (695)
.|.|.|..+ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+. ++..-..-....
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 477777776 444 444432 23567899999999876665 578999999985421 122222233568
Q ss_pred EEEEEecCCCeEEEEEeCCCcEEEEECCC----------CeEEEEEecCCC
Q 005473 644 MSLDFHPSKEDLLCSCDNNSEIRYWSINN----------GSCAGVFKNFFE 684 (695)
Q Consensus 644 ~sl~fspdg~~llaSgs~Dg~IriWDl~t----------g~~v~~~~~h~~ 684 (695)
..++|+|+| +++++.-.|+.|.+||+.+ ...+.++..|-.
T Consensus 334 ~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 334 LHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp EEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred ceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence 999999999 7888999999999999987 567777776644
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.15 E-value=0.075 Score=57.09 Aligned_cols=116 Identities=7% Similarity=-0.054 Sum_probs=79.6
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEe-CC-CeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLLA-TGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-AD-RTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~La-Sgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs-~D-gtIrvWDl~t~~~~l 633 (695)
....+++.+.+..|+ +-...+.|.+.+++.......+...-.....|++.|.+..|+.+. .+ +.|..++++.... .
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~ 238 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-R 238 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-E
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-E
Confidence 356788887655554 444567898988876544444444446678999999766665554 34 6888888875432 2
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
......-.....|+|+|++..|+++-...+.|..+|+...
T Consensus 239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 2222333457899999988878888778889999998743
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.09 E-value=0.016 Score=59.94 Aligned_cols=133 Identities=8% Similarity=0.034 Sum_probs=84.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecc--------------------cCCCeEEEEEcCCCCEEEEEe
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE--------------------HTQWITDVRFSPSLSRLATSS 616 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~--------------------H~~~V~~v~~spdg~~LaTgs 616 (695)
...+++|++++++++++..++.|..||..+++.. .+.. ....+..|++.++...|+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3567899999998888888999999998765543 2210 113578999998334555555
Q ss_pred CCCeEEEEECCCCCeeEEEEec-----CCCCeEEEEEec-CCCeEEEEEeC-----------------CCcEEEEECCCC
Q 005473 617 ADRTVRVWDTENPDYSLRTFTG-----HSTTVMSLDFHP-SKEDLLCSCDN-----------------NSEIRYWSINNG 673 (695)
Q Consensus 617 ~DgtIrvWDl~t~~~~l~~~~g-----h~~~V~sl~fsp-dg~~llaSgs~-----------------Dg~IriWDl~tg 673 (695)
..+.|.++|..++. +..+.. .......+++.+ +|. ++++... ++.|..||..++
T Consensus 99 ~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp TTTEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred CCCCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55668889977543 222221 113468899999 886 5545322 367999998877
Q ss_pred eEEEEEecCCCcEEEEEEeCCC
Q 005473 674 SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 674 ~~v~~~~~h~~~VtsVaf~sPd 695 (695)
+........ .....|+| +|+
T Consensus 176 ~~~~~~~~~-~~p~gia~-~~d 195 (322)
T 2fp8_A 176 ETTLLLKEL-HVPGGAEV-SAD 195 (322)
T ss_dssp EEEEEEEEE-SCCCEEEE-CTT
T ss_pred EEEEeccCC-ccCcceEE-CCC
Confidence 654333221 12245666 654
No 253
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.04 E-value=0.014 Score=68.62 Aligned_cols=113 Identities=11% Similarity=0.071 Sum_probs=73.5
Q ss_pred EEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeE--EEEec-ccCCCeEEEEEcCCCCEEEEEeC---CCeEEEEECC
Q 005473 559 ESCHFSPDGKLLATGGHD-----KKAVLWCTESFTV--KSTLE-EHTQWITDVRFSPSLSRLATSSA---DRTVRVWDTE 627 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~D-----g~V~IWDl~t~~~--~~~l~-~H~~~V~~v~~spdg~~LaTgs~---DgtIrvWDl~ 627 (695)
..++|+|||+.|+....| ..|++|++.++.. +..+. .+......+.|+||+++|+..+. ...|+++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 468899999887777665 3588888877642 23333 23345678999999998876552 3458999998
Q ss_pred CCCeeE--EEE-ecCCCCeEEEEEecCCCeEEEEEeCC----CcEEEEECCC
Q 005473 628 NPDYSL--RTF-TGHSTTVMSLDFHPSKEDLLCSCDNN----SEIRYWSINN 672 (695)
Q Consensus 628 t~~~~l--~~~-~gh~~~V~sl~fspdg~~llaSgs~D----g~IriWDl~t 672 (695)
++.... ..+ .+..+...++.|+. |..|++....+ ..|.++|+.+
T Consensus 304 ~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 304 KGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp SCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 753212 333 33445567777654 55566666554 3677778765
No 254
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.01 E-value=0.28 Score=50.85 Aligned_cols=114 Identities=9% Similarity=-0.034 Sum_probs=79.9
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC--CeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLLA-TGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD--RTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~La-Sgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D--gtIrvWDl~t~~~~l 633 (695)
....+++.+.+..|+ +-..++.|.++|.+.......+.........+++.|.+..|+.+..+ +.|..++++... .
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~--~ 155 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--I 155 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--E
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--e
Confidence 457899987555554 44567899999987654443444344567899999976666555443 688888887433 2
Q ss_pred EEE-ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 634 RTF-TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 634 ~~~-~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
..+ ...-.....|+|++++..++++-...+.|..+|++.
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 333 223356789999998887887877788999999874
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.98 E-value=0.071 Score=55.45 Aligned_cols=136 Identities=11% Similarity=-0.014 Sum_probs=85.7
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCcEEEEECCC----CeEEEEecccCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCC
Q 005473 556 SKVESCHFSPDGKLLATG-GHDKKAVLWCTES----FTVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTENP 629 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSg-s~Dg~V~IWDl~t----~~~~~~l~~H~~~V~~v~~spdg~~L-aTgs~DgtIrvWDl~t~ 629 (695)
..+..++|++++..|+.+ ..++.|..+|+.+ ......+...-.....+++.+.++.| ++-..++.|.++|++..
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 457899999876655554 4568999999876 22222333223456789998755544 55566789999999853
Q ss_pred CeeEEEEecCCCCeEEEEEecCCCeEEEEEeCC-CcEEEEECCCCeEEEEEe-cCCCcEEEEEEeCC
Q 005473 630 DYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN-SEIRYWSINNGSCAGVFK-NFFESFVSVRVVQP 694 (695)
Q Consensus 630 ~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D-g~IriWDl~tg~~v~~~~-~h~~~VtsVaf~sP 694 (695)
.. ...+.........++++|.+..++++.... +.|..++++ |+....+. ..-.....|+| +|
T Consensus 110 ~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~-d~ 173 (316)
T 1ijq_A 110 KR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITL-DL 173 (316)
T ss_dssp SE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEE-ET
T ss_pred ce-EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEE-ec
Confidence 32 223333345678999999777777666544 789999886 43333332 22345577877 65
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.98 E-value=0.016 Score=63.58 Aligned_cols=136 Identities=11% Similarity=0.104 Sum_probs=87.1
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC-CC----eEEEEECCCCC
Q 005473 557 KVESCHFSP-DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA-DR----TVRVWDTENPD 630 (695)
Q Consensus 557 ~V~~v~fsp-dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~-Dg----tIrvWDl~t~~ 630 (695)
....|+|+| ++..|+.+...+.|+++|+.++....... .......|+|++++++|+.+.. ++ .+.+++.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 357899998 45667776666889999998766554443 4566889999999996666554 22 34444443221
Q ss_pred eeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec-CCCcEEEEEEeCCC
Q 005473 631 YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN-FFESFVSVRVVQPR 695 (695)
Q Consensus 631 ~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~-h~~~VtsVaf~sPd 695 (695)
.....+.. ......++++|++..++++-..++.|+.||...+.....+.. .......|+| +|+
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~-~pd 280 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQF-HPS 280 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEE-CTT
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEE-cCC
Confidence 11122222 234677889995445777777789999999987765333322 2234578888 875
No 257
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.96 E-value=0.036 Score=58.77 Aligned_cols=136 Identities=9% Similarity=0.018 Sum_probs=90.2
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCeeE
Q 005473 556 SKVESCHFSPDGKLLATGG-HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~L-aTgs~DgtIrvWDl~t~~~~l 633 (695)
..+..++|++.+..|+.+. ..+.|..+++.+......+.........+++.+.+..| ++-...+.|.+++++.... .
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~ 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-E
Confidence 3478999997666555554 57889999998765544444333456789998855544 5556678999999985432 3
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCC-CcEEEEECCCCeEEEEE-ecCCCcEEEEEEeCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNN-SEIRYWSINNGSCAGVF-KNFFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~D-g~IriWDl~tg~~v~~~-~~h~~~VtsVaf~sP 694 (695)
..+.........++++|.+..++++-..+ +.|..++++.. ....+ ...-.....|+| +|
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~-d~ 212 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTI-DY 212 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEE-ET
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEE-eC
Confidence 33333345678999999877777776666 88999998643 33333 222334577777 65
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.93 E-value=0.013 Score=67.91 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=79.8
Q ss_pred EEcCCCC---EEEEEeCCCcEEEEECCCCeEEEEecccC------------CCe------------------------EE
Q 005473 562 HFSPDGK---LLATGGHDKKAVLWCTESFTVKSTLEEHT------------QWI------------------------TD 602 (695)
Q Consensus 562 ~fspdg~---~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~------------~~V------------------------~~ 602 (695)
.+..+|+ +|+.++.+|.|+++|..+++.+..+.... .+| ..
T Consensus 306 d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~ 385 (668)
T 1kv9_A 306 ELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHS 385 (668)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSC
T ss_pred EeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCc
Confidence 3334665 68899999999999999999875443211 000 01
Q ss_pred EEEcCCCCEEEEE------------------------------------eCCCeEEEEECCCCCeeEEEEecCCCCeEEE
Q 005473 603 VRFSPSLSRLATS------------------------------------SADRTVRVWDTENPDYSLRTFTGHSTTVMSL 646 (695)
Q Consensus 603 v~~spdg~~LaTg------------------------------------s~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl 646 (695)
++++|+..+++.. ..+|.|+.||+.+++. +..+..+ ..+...
T Consensus 386 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~-~W~~~~~-~~~~~~ 463 (668)
T 1kv9_A 386 MSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA-AWKVPYP-THWNGG 463 (668)
T ss_dssp CEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE-EEEEEES-SSCCCC
T ss_pred ceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE-EEEccCC-CCCcCc
Confidence 5777776665542 1347899999999775 4444432 233333
Q ss_pred EEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 647 DFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 647 ~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
.+...+. +++.++.|+.|++||.++|+.+..++..
T Consensus 464 ~~~t~gg-~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 464 TLSTAGN-LVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eeEeCCC-EEEEECCcccchhhhhhcChhheEecCC
Confidence 4445555 5667899999999999999999988754
No 259
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.92 E-value=0.013 Score=61.92 Aligned_cols=109 Identities=7% Similarity=-0.009 Sum_probs=75.6
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEecccC---------CCeE-EEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE
Q 005473 567 GKLLATGGHDKKAVLWCTESFTVKSTLEEHT---------QWIT-DVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF 636 (695)
Q Consensus 567 g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~---------~~V~-~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~ 636 (695)
+..|++++.++.|..||..+++.+..+.... ..+. .+.. ++..|+.++.++.|..+|.++++. +..+
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~-~W~~ 129 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTV-AWQT 129 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCE-EEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCE-EEEE
Confidence 5678888889999999999999887765421 2222 2222 456888888999999999998875 4444
Q ss_pred ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 637 TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 637 ~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
...........+. + . .++.++.++.|+.+|..+|+.+..+..
T Consensus 130 ~~~~~~~~~p~~~-~-~-~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 130 KVAGEALSRPVVS-D-G-LVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ECSSCCCSCCEEE-T-T-EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eCCCceEcCCEEE-C-C-EEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 4332222222333 3 3 455677899999999999998877664
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.91 E-value=0.06 Score=54.89 Aligned_cols=145 Identities=11% Similarity=0.069 Sum_probs=95.1
Q ss_pred EEecCCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeEEEEecc-cCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 005473 549 QLIPASTSKVESCHFSPDGKLL-ATGGHDKKAVLWCTESFTVKSTLEE-HTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (695)
Q Consensus 549 ~~l~~H~~~V~~v~fspdg~~L-aSgs~Dg~V~IWDl~t~~~~~~l~~-H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl 626 (695)
+.+.+-.+.+..++|+|++..| ++...++.|...|.. ++.++.+.- -......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4566666679999999986654 456778889999998 777777632 1256788999988876666556788999988
Q ss_pred CCCCe--eEEEEe------cCCCCeEEEEEecCCCeEEEEEeCCC-cEEEEECC-CCeEEEEEe-------cCCCcEEEE
Q 005473 627 ENPDY--SLRTFT------GHSTTVMSLDFHPSKEDLLCSCDNNS-EIRYWSIN-NGSCAGVFK-------NFFESFVSV 689 (695)
Q Consensus 627 ~t~~~--~l~~~~------gh~~~V~sl~fspdg~~llaSgs~Dg-~IriWDl~-tg~~v~~~~-------~h~~~VtsV 689 (695)
..... .+.... ........|+|+|++..++++...+. .|+.|+-. ....+..+. .+...+.+|
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 76542 122221 12344689999999887887766655 56666511 111222221 133456788
Q ss_pred EEeCCC
Q 005473 690 RVVQPR 695 (695)
Q Consensus 690 af~sPd 695 (695)
+| +|.
T Consensus 179 ~~-dp~ 183 (255)
T 3qqz_A 179 EF-NQQ 183 (255)
T ss_dssp EE-ETT
T ss_pred EE-cCC
Confidence 88 774
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.90 E-value=0.2 Score=54.07 Aligned_cols=137 Identities=13% Similarity=0.058 Sum_probs=94.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCCCCe
Q 005473 555 TSKVESCHFSPDGKLLATGGH--DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVRVWDTENPDY 631 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~--Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs-~DgtIrvWDl~t~~~ 631 (695)
-.....|++.|.+.+|+.+.. .+.|...+++.......+...-.....|++++++..|+.+. ....|..+|++....
T Consensus 201 ~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 201 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Confidence 344789999997776666653 37888889876544444444446788999998877776664 467899999975432
Q ss_pred eEEEEec--CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 632 SLRTFTG--HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 632 ~l~~~~g--h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
...... .-.....|++. +..++++-...+.|..+|..+|+.+.++.........|+++||
T Consensus 281 -~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~ 342 (400)
T 3p5b_L 281 -KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHN 342 (400)
T ss_dssp -EEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESG
T ss_pred -EEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEee
Confidence 222222 23456677773 4467778788899999998888888887765555677765465
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.90 E-value=0.033 Score=59.96 Aligned_cols=137 Identities=9% Similarity=-0.006 Sum_probs=90.0
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCeeE
Q 005473 556 SKVESCHFSPDGKLLATG-GHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSg-s~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~L-aTgs~DgtIrvWDl~t~~~~l 633 (695)
..+..++|++.+..|+.+ ...+.|..+++........+.........+++.+.+..| ++-...+.|.+++++.... .
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-E
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-E
Confidence 347899999766555544 457889999998766544444333456688888855554 5555678899999875432 3
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCC-CcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNN-SEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~D-g~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
..+.........|+++|.+..++++-..+ +.|..++++.......+...-.....|+| +|
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlav-d~ 255 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTI-DY 255 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEE-EG
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEE-eC
Confidence 33333345678999999888777776666 88999998743332222233344577777 64
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.88 E-value=0.022 Score=62.31 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=76.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC-C----cEEEEECCCCeEE--EEecccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEE
Q 005473 554 STSKVESCHFSPDGKLLATGGHD-K----KAVLWCTESFTVK--STLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWD 625 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~D-g----~V~IWDl~t~~~~--~~l~~H~~~V~~v~~sp-dg~~LaTgs~DgtIrvWD 625 (695)
.......|+|+++|++|+.+... + .+.+++. .+... ..+.. ......++++| ++.++++-..++.|+.||
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~ 254 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYD 254 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEE
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEE
Confidence 34457899999999977666642 2 2333443 22221 22322 23456888999 666666666788999999
Q ss_pred CCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC
Q 005473 626 TENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 626 l~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~ 671 (695)
...+........+.......++|+|+|+.++++-...+.|+.||..
T Consensus 255 ~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 255 FTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 9865431111112224578999999999788787788999998875
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.84 E-value=0.23 Score=50.51 Aligned_cols=123 Identities=11% Similarity=0.147 Sum_probs=82.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE---EEEec------ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTV---KSTLE------EHTQWITDVRFSPSLSRLATSSADRTVRVWDTE 627 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~---~~~l~------~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~ 627 (695)
-...|++.+++.++++.-.++.+.++++..... +.... .+......|+|+|.+..|+++.......||.++
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 477889999998777766788899998765432 22221 124456899999998777776654444444443
Q ss_pred C--CCeeEEEEe-------cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe
Q 005473 628 N--PDYSLRTFT-------GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 628 t--~~~~l~~~~-------gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~ 680 (695)
. ....+..+. .+...+.+++++|....+++.......|.++|.. |+.+..+.
T Consensus 151 g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~ 211 (255)
T 3qqz_A 151 GLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMS 211 (255)
T ss_dssp STTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEE
T ss_pred ccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEE
Confidence 1 111122221 1234578999999988899899999999999965 66666655
No 265
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.83 E-value=0.19 Score=52.59 Aligned_cols=115 Identities=8% Similarity=-0.036 Sum_probs=79.1
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLL-ATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA--DRTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~L-aSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~--DgtIrvWDl~t~~~~l 633 (695)
....+++.+.+..| ++-...+.|.+++++.......+.........|++.|.+..|+.+.. .+.|..++++.... .
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~ 158 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-F 158 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-E
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-E
Confidence 45688888755544 44455788999998765443334344566789999997666655553 57888888874332 2
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
......-.....|+|++++..++++-...+.|..+|++.
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 222222345689999998887887877889999999874
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.76 E-value=0.51 Score=50.81 Aligned_cols=119 Identities=9% Similarity=-0.039 Sum_probs=83.2
Q ss_pred CCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCC
Q 005473 554 STSKVESCHFSPDGKLL-ATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA--DRTVRVWDTENPD 630 (695)
Q Consensus 554 H~~~V~~v~fspdg~~L-aSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~--DgtIrvWDl~t~~ 630 (695)
.......+++.+.+..| ++-...+.|.+.|++.......+...-.....|++.|.+.+|+.... .+.|...+++...
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 236 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc
Confidence 33457889998855544 44455788999999866555445444456889999997666655543 3689999987543
Q ss_pred eeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 631 YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 631 ~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
. .......-.....|+|++++..|+++-...+.|..+|++..
T Consensus 237 ~-~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 237 I-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp C-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred c-EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 2 22233333567899999988878877777889999998743
No 267
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.76 E-value=0.03 Score=61.07 Aligned_cols=110 Identities=17% Similarity=0.183 Sum_probs=74.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe------------EEEEecc------cCCCeEEEEEcCC---CCEEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFT------------VKSTLEE------HTQWITDVRFSPS---LSRLATS 615 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~------------~~~~l~~------H~~~V~~v~~spd---g~~LaTg 615 (695)
.|..+..+|+|++||..+ +..|.|..+..+. ..+.+.- ....|..+.|+|- +..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 477899999999999986 5679998886221 1122221 2467999999994 6789999
Q ss_pred eCCCeEEEEECCCC-CeeEEEEe---------cCCCCeEEEEEecCCCeEEEE-EeCCCcEEEE
Q 005473 616 SADRTVRVWDTENP-DYSLRTFT---------GHSTTVMSLDFHPSKEDLLCS-CDNNSEIRYW 668 (695)
Q Consensus 616 s~DgtIrvWDl~t~-~~~l~~~~---------gh~~~V~sl~fspdg~~llaS-gs~Dg~IriW 668 (695)
..|++||+||+... ..+. ++. .....|.+++|..++=.|++. .+.+|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999999852 2223 332 223567888888865444432 2355666544
No 268
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.75 E-value=0.079 Score=56.03 Aligned_cols=113 Identities=6% Similarity=0.060 Sum_probs=82.4
Q ss_pred eEEEEE---cCCCCEEEEEe-------------CCCcEEEEECC---CCeEEEEec--cc-----------CCCeEEEEE
Q 005473 558 VESCHF---SPDGKLLATGG-------------HDKKAVLWCTE---SFTVKSTLE--EH-----------TQWITDVRF 605 (695)
Q Consensus 558 V~~v~f---spdg~~LaSgs-------------~Dg~V~IWDl~---t~~~~~~l~--~H-----------~~~V~~v~~ 605 (695)
+..|.| .++++++++.. .+..|..||+. +++.+.... .. ...+.+|+.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 578999 68888877644 26779999999 777765543 21 134789999
Q ss_pred cCCCCEEEEEeCC-CeEEEEECCCCCeeEEEEe-cC-----CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 606 SPSLSRLATSSAD-RTVRVWDTENPDYSLRTFT-GH-----STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 606 spdg~~LaTgs~D-gtIrvWDl~t~~~~l~~~~-gh-----~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
.++|+..++++.. +.|..+|.+... +..+. .. .-..+.|+++|+|..|++..+ +|.|..+|+++.
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~~--~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGKT--VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSCC--EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCCE--EeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 9999999999988 888888877532 23221 11 123568999999987776666 999999998753
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.75 E-value=0.085 Score=54.22 Aligned_cols=125 Identities=10% Similarity=0.042 Sum_probs=79.5
Q ss_pred eeeEEEecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC-C-eEE
Q 005473 545 FTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD-R-TVR 622 (695)
Q Consensus 545 ~~~v~~l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D-g-tIr 622 (695)
.+.+..+... .....++|+++++++++-..++.|..||..+. ....+. ....+..+++.++++++++.... + .|.
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVV 98 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEE
Confidence 3445555443 45789999999997777667899999998753 333332 24568899999999876665433 2 477
Q ss_pred EEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 623 VWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 623 vWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
.+|..+++.....-.........+++.++ ..++++...++.|+++|..++
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTT
T ss_pred EEcCCCCeEEEEEeCCCccccCcccccCC-CcEEEEECCCCeEEEEeCCCC
Confidence 77877765421111112223345555444 346656556889999998764
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.73 E-value=0.17 Score=52.89 Aligned_cols=137 Identities=7% Similarity=0.013 Sum_probs=89.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECCCCCe
Q 005473 555 TSKVESCHFSPDGKLLATGGH--DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADRTVRVWDTENPDY 631 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~--Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTg-s~DgtIrvWDl~t~~~ 631 (695)
......+++.|.+.+|+.+.. .+.|...+++.......+...-.....|+|++++..|+.+ +..+.|..+|++....
T Consensus 121 ~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 200 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR 200 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce
Confidence 345688999987766666653 5778888886543333333333456899999976666555 4567899999975332
Q ss_pred eEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 632 SLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 632 ~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
.....+.......+++. +..++.+-...+.|..+|..+|+.+..+.........|+.+||
T Consensus 201 -~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~ 260 (318)
T 3sov_A 201 -QAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQ 260 (318)
T ss_dssp -EEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEEECG
T ss_pred -EEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEEecc
Confidence 22233334566778875 3457777777899999999888877777644333445554354
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.69 E-value=0.012 Score=67.09 Aligned_cols=115 Identities=12% Similarity=0.009 Sum_probs=79.0
Q ss_pred CCCC---EEEEEeCCCcEEEEECCCCeEEEEecccC-------------CCe--------------------------EE
Q 005473 565 PDGK---LLATGGHDKKAVLWCTESFTVKSTLEEHT-------------QWI--------------------------TD 602 (695)
Q Consensus 565 pdg~---~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~-------------~~V--------------------------~~ 602 (695)
.+|+ +++.++.+|.|+++|..+++.+..+.... .+| ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4674 67788889999999999999887664221 111 13
Q ss_pred EEEcCCCCEEEEEe-------------------------------------CCCeEEEEECCCCCeeEEEEecCCCCeEE
Q 005473 603 VRFSPSLSRLATSS-------------------------------------ADRTVRVWDTENPDYSLRTFTGHSTTVMS 645 (695)
Q Consensus 603 v~~spdg~~LaTgs-------------------------------------~DgtIrvWDl~t~~~~l~~~~gh~~~V~s 645 (695)
++|+|+..+|++.+ .++.|..||+.+++. +..+... ..+.+
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~-~W~~~~~-~~~~~ 468 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA-KWTKWEK-FAAWG 468 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE-EEEEEES-SCCCS
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE-EEEecCC-CCccc
Confidence 57788777776653 357899999998875 4444322 22333
Q ss_pred EEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 646 LDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 646 l~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
..+...+. +++.++.||.|++||.++|+++..+...
T Consensus 469 ~~~~t~gg-~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 469 GTLYTKGG-LVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp BCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eeEEECCC-EEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 33333445 4456889999999999999999988743
No 272
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.66 E-value=0.26 Score=57.69 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=89.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecc--------cCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEE--------HTQWITDVRFSPSLSRLATSSADRTVRVWDT 626 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~--------H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl 626 (695)
...|.++...++|++. .|+.++-|.+||..++........ ....|.++...+++.+|..|+.++.|.+||.
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 3469999999888744 567777799999887665433211 2367999999888875777888788999999
Q ss_pred CCCCeeEEEEe-----cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec------CCCcEEEEEE
Q 005473 627 ENPDYSLRTFT-----GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN------FFESFVSVRV 691 (695)
Q Consensus 627 ~t~~~~l~~~~-----gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~------h~~~VtsVaf 691 (695)
.++.. ..+. .+...|.++...++|. +++ |+. +.|.+||..+++....... +...|.+|..
T Consensus 435 ~~~~~--~~~~~~~~~l~~~~v~~i~~d~~g~-lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 505 (795)
T 4a2l_A 435 NSGQV--ENFNQRNSQLVNENVYAILPDGEGN-LWL-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFR 505 (795)
T ss_dssp TTCCE--EEECTTTSCCSCSCEEEEEECSSSC-EEE-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEE
T ss_pred CCCcE--EEeecCCCCcCCCeeEEEEECCCCC-EEE-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEE
Confidence 87653 3333 1345799999888887 443 333 4588999887765433211 2356777765
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.66 E-value=0.12 Score=53.04 Aligned_cols=114 Identities=18% Similarity=0.152 Sum_probs=71.2
Q ss_pred CeEEEEEcCCCCEEEEEeCC-C-cEEEEECCCCeEEEEec-ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLLATGGHD-K-KAVLWCTESFTVKSTLE-EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~D-g-~V~IWDl~t~~~~~~l~-~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
.+.++++.++|+++++.... + .|..+|..+++...... ........++..+++..+++-..++.|+++|...+...+
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v 152 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI 152 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeE
Confidence 47899999999966655432 2 46677877776543332 122334455555555445555568899999987643212
Q ss_pred EEEec---------CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 634 RTFTG---------HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 634 ~~~~g---------h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
....+ .-.....+ ++++..++++-...+.|++||+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 153 WLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred EEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 21111 11234455 888888888888889999999874
No 274
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.53 E-value=0.034 Score=64.42 Aligned_cols=104 Identities=8% Similarity=0.070 Sum_probs=73.9
Q ss_pred CCcEEEEECCCCeEEEEecccC-------------------------------CCeEEEEEcCCCCEEEEEeCCC-----
Q 005473 576 DKKAVLWCTESFTVKSTLEEHT-------------------------------QWITDVRFSPSLSRLATSSADR----- 619 (695)
Q Consensus 576 Dg~V~IWDl~t~~~~~~l~~H~-------------------------------~~V~~v~~spdg~~LaTgs~Dg----- 619 (695)
++.|+.+|.++++.+..+.... .....+++.|+..+++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999988774210 0112468888888888887766
Q ss_pred --------------eEEEEECCCCCeeEEEEec--CC-------CCeEEEEEecCCC--eEEEEEeCCCcEEEEECCCCe
Q 005473 620 --------------TVRVWDTENPDYSLRTFTG--HS-------TTVMSLDFHPSKE--DLLCSCDNNSEIRYWSINNGS 674 (695)
Q Consensus 620 --------------tIrvWDl~t~~~~l~~~~g--h~-------~~V~sl~fspdg~--~llaSgs~Dg~IriWDl~tg~ 674 (695)
.|..+|+++++. +..+.. |. ..+....+..+|+ .+++.++.+|.|+++|..+|+
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~-~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKL-AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCce-eeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 499999999875 555442 32 2233334444654 357789999999999999999
Q ss_pred EEEEEe
Q 005473 675 CAGVFK 680 (695)
Q Consensus 675 ~v~~~~ 680 (695)
.+..++
T Consensus 336 ~l~~~~ 341 (668)
T 1kv9_A 336 LISAEK 341 (668)
T ss_dssp EEEEEE
T ss_pred Eecccc
Confidence 986554
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.53 E-value=0.078 Score=58.07 Aligned_cols=116 Identities=10% Similarity=0.118 Sum_probs=72.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC----Cc-EEEEECCCCeE-EEEecccCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEC
Q 005473 554 STSKVESCHFSPDGKLLATGGHD----KK-AVLWCTESFTV-KSTLEEHTQWITDVRFSP-SLSRLATSSADRTVRVWDT 626 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~D----g~-V~IWDl~t~~~-~~~l~~H~~~V~~v~~sp-dg~~LaTgs~DgtIrvWDl 626 (695)
......+++|+++|+ |+.+... .. +...+...... ...+. .-.....++++| ++.++++-..++.|+.+|.
T Consensus 180 ~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 180 NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECT
T ss_pred CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC
Confidence 344588999999999 5554432 12 33333222111 11221 234456788999 6666666667789999999
Q ss_pred CCCCeeEEEEe-cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC
Q 005473 627 ENPDYSLRTFT-GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 627 ~t~~~~l~~~~-gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~ 671 (695)
.++......+. +.......++|+|++..|+++-...+.|+.+|+.
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 86654112222 2223345799999998788787788999998875
No 276
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.42 E-value=0.52 Score=55.65 Aligned_cols=138 Identities=14% Similarity=0.065 Sum_probs=91.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECCCCC
Q 005473 554 STSKVESCHFSPDGKLLATGGH-D-KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATS-SADRTVRVWDTENPD 630 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~-D-g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTg-s~DgtIrvWDl~t~~ 630 (695)
.-.....|++.|.+.+|+.+.. + +.|.+.+++.......+...-.....|++.+.+..|+.+ .....|.++|++...
T Consensus 512 ~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 512 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 3345789999998776766653 2 678888987655544444444678899999876666665 446789999997544
Q ss_pred eeEEEEec--CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 631 YSLRTFTG--HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 631 ~~l~~~~g--h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
. ...+.. .-.....|++. +..|+++-...+.|...|..+|+.+.++.........|+++||
T Consensus 592 ~-~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~ 654 (791)
T 3m0c_C 592 R-KTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHN 654 (791)
T ss_dssp C-EEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESG
T ss_pred e-EEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeecc
Confidence 3 233332 22345677764 3467778778899999998888777777644433345554354
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.35 E-value=0.41 Score=56.01 Aligned_cols=128 Identities=9% Similarity=-0.003 Sum_probs=86.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEec----ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE----EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD 630 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~----~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~ 630 (695)
...|.++...++|++|..|+.++-|.+||..+++...... .+...|.++...+++.+.+.. . +.|.+||..++.
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe
Confidence 3569999999999867777877779999998876543322 134679999988887755544 4 458899988754
Q ss_pred eeEEEEec-------CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe-------cCCCcEEEEEE
Q 005473 631 YSLRTFTG-------HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK-------NFFESFVSVRV 691 (695)
Q Consensus 631 ~~l~~~~g-------h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~-------~h~~~VtsVaf 691 (695)
. ..+.. ....|.++...++|. +++. +. +-|.+||..+++. .+. .+...|.+|..
T Consensus 483 ~--~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWig-t~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~ 550 (795)
T 4a2l_A 483 F--TTIEKEKDGTPVVSKQITTLFRDSHKR-LWIG-GE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYE 550 (795)
T ss_dssp E--EECCBCTTCCBCCCCCEEEEEECTTCC-EEEE-ES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEE
T ss_pred E--EEccccccccccCCceEEEEEECCCCC-EEEE-eC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEE
Confidence 3 33321 235789999998887 4433 33 4588899887765 332 12346777765
No 278
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.27 E-value=0.037 Score=63.15 Aligned_cols=115 Identities=10% Similarity=0.070 Sum_probs=76.4
Q ss_pred CCCC---EEEEEeCCCcEEEEECCCCeEEEEecccC-------------CCe----------------------------
Q 005473 565 PDGK---LLATGGHDKKAVLWCTESFTVKSTLEEHT-------------QWI---------------------------- 600 (695)
Q Consensus 565 pdg~---~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~-------------~~V---------------------------- 600 (695)
.+|+ +|+.++.+|.|+++|.++++.+..+.... .++
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 4674 78889999999999999999887664321 000
Q ss_pred ----EEEEEcCCCCEEEEEe---------------------------------CCCeEEEEECCCCCeeEEEEecCCCCe
Q 005473 601 ----TDVRFSPSLSRLATSS---------------------------------ADRTVRVWDTENPDYSLRTFTGHSTTV 643 (695)
Q Consensus 601 ----~~v~~spdg~~LaTgs---------------------------------~DgtIrvWDl~t~~~~l~~~~gh~~~V 643 (695)
..++++|+..++++.. .+|.|..||+.+++. +.....+. .+
T Consensus 411 g~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~-~W~~~~~~-~~ 488 (582)
T 1flg_A 411 GKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKV-VWEHKEHL-PL 488 (582)
T ss_dssp SSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCE-EEEEEESS-CC
T ss_pred ccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCE-EEEecCCC-CC
Confidence 1245666544544432 267899999999875 44433222 22
Q ss_pred EEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 644 MSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 644 ~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
..-.+...+. +++.|+.|+.|+.||.++|+.+..++..
T Consensus 489 ~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 489 WAGVLATAGN-LVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp CSCCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cccceEeCCC-EEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 2211222344 5567899999999999999999988854
No 279
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=96.22 E-value=0.0039 Score=68.42 Aligned_cols=14 Identities=14% Similarity=0.418 Sum_probs=7.8
Q ss_pred HHHHHHHHHHhhhh
Q 005473 52 LFEWWSVFWDIFIA 65 (695)
Q Consensus 52 L~EWW~iFwDif~A 65 (695)
..++|.++.+.+..
T Consensus 336 ~~~~~~~~~~~~~~ 349 (449)
T 3iot_A 336 MSAFWYAVRTAVIN 349 (449)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34556666665544
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.18 E-value=0.21 Score=59.09 Aligned_cols=138 Identities=10% Similarity=-0.016 Sum_probs=87.4
Q ss_pred CCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCC----eEEEEecccCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCC
Q 005473 555 TSKVESCHFSPDGKLLATG-GHDKKAVLWCTESF----TVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTEN 628 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSg-s~Dg~V~IWDl~t~----~~~~~l~~H~~~V~~v~~spdg~~L-aTgs~DgtIrvWDl~t 628 (695)
...+..|+|.+....|+.+ ...+.|+.+++... .....+.........|++.+.++.| ++-...+.|.+.+++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 4557899999865555544 45678999998753 2333444344567789998876555 5555678999999985
Q ss_pred CCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCC-CcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 629 PDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN-SEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 629 ~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D-g~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
... ...+.........|+++|.+..|+++-..+ +.|.+.++........+...-.....|++ +|
T Consensus 503 ~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLav-D~ 567 (791)
T 3m0c_C 503 VKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITL-DL 567 (791)
T ss_dssp SSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEE-ET
T ss_pred CeE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEE-ec
Confidence 432 233333445689999999877677665433 78999998744333333333345577776 54
No 281
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.18 E-value=0.21 Score=54.52 Aligned_cols=129 Identities=13% Similarity=0.099 Sum_probs=85.5
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCeEEEEeccc----CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC-------
Q 005473 562 HFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEH----TQWITDVRFSPSLSRLATSSADRTVRVWDTENPD------- 630 (695)
Q Consensus 562 ~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H----~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~------- 630 (695)
..+.+|..|+.+- ++.||..++......+.+.-. -+.|..+..+|+|.+||..+ +..|.|-.+..+.
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 3445677777665 588998888744444444322 22588899999999999885 6689999887322
Q ss_pred ----eeEEEEec------CCCCeEEEEEecCCCe--EEEEEeCCCcEEEEECCCC--eEEEEEe---------cCCCcEE
Q 005473 631 ----YSLRTFTG------HSTTVMSLDFHPSKED--LLCSCDNNSEIRYWSINNG--SCAGVFK---------NFFESFV 687 (695)
Q Consensus 631 ----~~l~~~~g------h~~~V~sl~fspdg~~--llaSgs~Dg~IriWDl~tg--~~v~~~~---------~h~~~Vt 687 (695)
..++++.- ....|..+.|||-+.. -|++-..|+.||+||+... ++. .++ .....|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 11233332 2467999999996532 4556777999999999852 233 332 2236778
Q ss_pred EEEEeCC
Q 005473 688 SVRVVQP 694 (695)
Q Consensus 688 sVaf~sP 694 (695)
+++| .+
T Consensus 184 S~~F-g~ 189 (452)
T 3pbp_A 184 DLEF-SK 189 (452)
T ss_dssp EEEE-CT
T ss_pred EEEE-cC
Confidence 8888 54
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.18 E-value=0.31 Score=51.93 Aligned_cols=124 Identities=14% Similarity=0.172 Sum_probs=88.7
Q ss_pred CCeEEEEE--cCC-CC-EEEEEeCCCcEEEEECC-------CCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 005473 556 SKVESCHF--SPD-GK-LLATGGHDKKAVLWCTE-------SFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVW 624 (695)
Q Consensus 556 ~~V~~v~f--spd-g~-~LaSgs~Dg~V~IWDl~-------t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvW 624 (695)
..+..+++ ++. ++ ++++...+|.+..|++. +.+.+++|.- .+.+..|.+.+....|+.+-.|..|+.+
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKF 206 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEE
Confidence 34566666 664 44 68888889999999882 3456677654 4678899999988999999999888888
Q ss_pred ECCCC----CeeEEEEe-cC-CCCeEEEEE--ecCCC-eEEEEEeCCCcEEEEECC-CCeEEEEEe
Q 005473 625 DTENP----DYSLRTFT-GH-STTVMSLDF--HPSKE-DLLCSCDNNSEIRYWSIN-NGSCAGVFK 680 (695)
Q Consensus 625 Dl~t~----~~~l~~~~-gh-~~~V~sl~f--spdg~-~llaSgs~Dg~IriWDl~-tg~~v~~~~ 680 (695)
|.+.. ...+..+. ++ ...+..|++ .+++. ++|+++-.+.++.+||.. +.+.+..|.
T Consensus 207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred eCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 86522 12243332 22 246788887 55666 688787678899999996 678888875
No 283
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.13 E-value=0.069 Score=56.67 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=60.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE--EEec---ccCCCeEEEEEcCC---CCEEEEEeC-C-----CeEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVK--STLE---EHTQWITDVRFSPS---LSRLATSSA-D-----RTVR 622 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~--~~l~---~H~~~V~~v~~spd---g~~LaTgs~-D-----gtIr 622 (695)
.-..++|.|+|++++ +..++.|++++ +++.. ..+. ........|+|+|+ +..|+.+.. + ..|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 467999999999554 46679999998 34422 2221 12356789999998 555544433 2 5788
Q ss_pred EEECCCCCe-----eEEEEe---cCCCCeEEEEEecCCCeEEEEE
Q 005473 623 VWDTENPDY-----SLRTFT---GHSTTVMSLDFHPSKEDLLCSC 659 (695)
Q Consensus 623 vWDl~t~~~-----~l~~~~---gh~~~V~sl~fspdg~~llaSg 659 (695)
.|+...... .+..+. +.......++|.|||. |+++.
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~ 152 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTT 152 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEEC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEE
Confidence 888774321 112232 1112346899999996 55453
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.03 E-value=0.045 Score=62.66 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=75.1
Q ss_pred CCC---CEEEEEeCCCcEEEEECCCCeEEEEecccC-------------CCe--------------------------EE
Q 005473 565 PDG---KLLATGGHDKKAVLWCTESFTVKSTLEEHT-------------QWI--------------------------TD 602 (695)
Q Consensus 565 pdg---~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~-------------~~V--------------------------~~ 602 (695)
.+| +.++.++.+|.|+++|.++++.+....... .+| ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 467 467788899999999999999887654211 111 13
Q ss_pred EEEcCCCCEEEEEe---------------------------------------CCCeEEEEECCCCCeeEEEEecCCCCe
Q 005473 603 VRFSPSLSRLATSS---------------------------------------ADRTVRVWDTENPDYSLRTFTGHSTTV 643 (695)
Q Consensus 603 v~~spdg~~LaTgs---------------------------------------~DgtIrvWDl~t~~~~l~~~~gh~~~V 643 (695)
++|+|+..++++.. .+|.|..||+.+++. +..... ...+
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~-~W~~~~-~~~~ 475 (599)
T 1w6s_A 398 DSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDY-KWEKME-RFAV 475 (599)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCE-EEEEEE-SSCC
T ss_pred ccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCE-EeEecC-CCCc
Confidence 45666655554421 347899999998875 433321 1122
Q ss_pred EEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC
Q 005473 644 MSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF 682 (695)
Q Consensus 644 ~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h 682 (695)
.+-.+...+. +++.++.|+.|+.||.++|+.+-.++..
T Consensus 476 ~~g~~~tagg-~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 476 WGGTMATAGD-LVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CSBCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCcceEecCC-EEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 2111223445 5556899999999999999999888743
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.03 E-value=0.11 Score=54.98 Aligned_cols=140 Identities=8% Similarity=0.093 Sum_probs=87.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEeccc-----C--CCeEEEEE---cCCCCEEEEEe----
Q 005473 552 PASTSKVESCHFSPDGKLLATGG-HDKKAVLWCTESFTVKSTLEEH-----T--QWITDVRF---SPSLSRLATSS---- 616 (695)
Q Consensus 552 ~~H~~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl~t~~~~~~l~~H-----~--~~V~~v~~---spdg~~LaTgs---- 616 (695)
....-.-.|++|.+....|+.++ ..++|..||...+........+ . ..+..|.| .|+++++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 33444457899988555555555 7999999999765444332222 1 13579999 68877777543
Q ss_pred ---------CCCeEEEEECC---CCCeeEEEEe--cC-----------CCCeEEEEEecCCCeEEEEEeCC-CcEEEEEC
Q 005473 617 ---------ADRTVRVWDTE---NPDYSLRTFT--GH-----------STTVMSLDFHPSKEDLLCSCDNN-SEIRYWSI 670 (695)
Q Consensus 617 ---------~DgtIrvWDl~---t~~~~l~~~~--gh-----------~~~V~sl~fspdg~~llaSgs~D-g~IriWDl 670 (695)
.+..|..||+. +++. +.... .. ...+..++..++|+ .+++++.. +.|..+|.
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~-~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKP-VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSA 166 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCC-SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECT
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCE-EEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeC
Confidence 26789999998 6554 32222 11 12478899999998 55577777 77777775
Q ss_pred CCCeEEEEEe------cCCCcEEEEEEeCCC
Q 005473 671 NNGSCAGVFK------NFFESFVSVRVVQPR 695 (695)
Q Consensus 671 ~tg~~v~~~~------~h~~~VtsVaf~sPd 695 (695)
+ |+.+..+. ...-..+.|+| +|+
T Consensus 167 d-G~~~~~~~~~~~~~~~~~G~nGIv~-~pd 195 (334)
T 2p9w_A 167 D-GKTVSTFAWESGNGGQRPGYSGITF-DPH 195 (334)
T ss_dssp T-SCCEEEEEECCCCSSSCCSCSEEEE-ETT
T ss_pred C-CCEEeeeeecCCCcccccCcceEEE-eCC
Confidence 5 33333332 11123457787 775
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.01 E-value=0.028 Score=64.70 Aligned_cols=116 Identities=9% Similarity=0.126 Sum_probs=75.5
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEECCCCeEE--EEe-cccCCCeEEEEEcCCCCEEEEEeC-CCeEEE
Q 005473 560 SCHFSP-DGKLLATGGHDK-----------KAVLWCTESFTVK--STL-EEHTQWITDVRFSPSLSRLATSSA-DRTVRV 623 (695)
Q Consensus 560 ~v~fsp-dg~~LaSgs~Dg-----------~V~IWDl~t~~~~--~~l-~~H~~~V~~v~~spdg~~LaTgs~-DgtIrv 623 (695)
++++.+ ++++++.|+.+. .+.+||..+.+.. ..+ ..+.....++++..++.++++|+. +..+++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566666 888888887653 5889998876532 222 223344556788889999999984 568999
Q ss_pred EECCCCCeeEEEEecCCC-CeEEEEEecCCCeEEEEEe-CC-----CcEEEEECCCCeEEE
Q 005473 624 WDTENPDYSLRTFTGHST-TVMSLDFHPSKEDLLCSCD-NN-----SEIRYWSINNGSCAG 677 (695)
Q Consensus 624 WDl~t~~~~l~~~~gh~~-~V~sl~fspdg~~llaSgs-~D-----g~IriWDl~tg~~v~ 677 (695)
||..+... ...-..+.. .-.++++.++++ +++.|+ .+ ..+.+||..+++...
T Consensus 270 yd~~t~~W-~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 270 YDSSSDSW-IPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp EEGGGTEE-EECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred ecCcCCce-eECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCccee
Confidence 99987543 111111111 223455667877 666676 34 579999998876544
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.96 E-value=0.13 Score=56.19 Aligned_cols=136 Identities=11% Similarity=0.042 Sum_probs=82.7
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC---Ce-EEEEECCCCC
Q 005473 557 KVESCHFSPD--GKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD---RT-VRVWDTENPD 630 (695)
Q Consensus 557 ~V~~v~fspd--g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D---gt-IrvWDl~t~~ 630 (695)
...+|+|+++ +..|+.+...+.|+.+|..++...... ........|+|+++++++++.... .. +..++.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3578999984 445656555588999999877765443 345568899999999955554321 22 3333433221
Q ss_pred eeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEE-ec-CCCcEEEEEEeCCC
Q 005473 631 YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVF-KN-FFESFVSVRVVQPR 695 (695)
Q Consensus 631 ~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~-~~-h~~~VtsVaf~sPd 695 (695)
.....+. .......++++|++..|+++-..++.|+.+|..++..+..+ .. ....-..|+| +|+
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~-dpd 283 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVW-HPT 283 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEE-CTT
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEE-eCC
Confidence 1111222 23446678899944447767667889999999877663332 21 2222346888 774
No 288
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.95 E-value=0.082 Score=60.05 Aligned_cols=85 Identities=11% Similarity=-0.069 Sum_probs=55.9
Q ss_pred CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCC-CCeEEEEEecCCCe
Q 005473 576 DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHS-TTVMSLDFHPSKED 654 (695)
Q Consensus 576 Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~-~~V~sl~fspdg~~ 654 (695)
++.|..||+.+++.+..+... ..+....+...+.+++.++.|+.|++||.++++. +..+.... .....+.+..+|..
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~-lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE-LWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCE-EEEEeCCCCcEeeeEEEEECCEE
Confidence 578999999999988877532 2233322333467888899999999999999886 55554322 22233446678875
Q ss_pred EEEEEeCC
Q 005473 655 LLCSCDNN 662 (695)
Q Consensus 655 llaSgs~D 662 (695)
++++.+..
T Consensus 521 yv~~~~G~ 528 (571)
T 2ad6_A 521 YIGSMYGV 528 (571)
T ss_dssp EEEEEECC
T ss_pred EEEEECCC
Confidence 66554433
No 289
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.84 E-value=0.18 Score=53.61 Aligned_cols=133 Identities=11% Similarity=0.012 Sum_probs=76.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-EEEEec---ccCCCeEEEEEcCC---CCEEEEEeC----C----Ce
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFT-VKSTLE---EHTQWITDVRFSPS---LSRLATSSA----D----RT 620 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~-~~~~l~---~H~~~V~~v~~spd---g~~LaTgs~----D----gt 620 (695)
.....++|.|+|+++ ++..++.|+++|. +++ .+..+. ........|+|+|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYL-VTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEE-EEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEE-EEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 346899999999844 5566799999974 444 222221 12356889999997 555544432 3 56
Q ss_pred EEEEECCCCC------e-eEEEEec-CCCCeEEEEEecCCCeEEEEEeC-------------CCcEEEEECCCC------
Q 005473 621 VRVWDTENPD------Y-SLRTFTG-HSTTVMSLDFHPSKEDLLCSCDN-------------NSEIRYWSINNG------ 673 (695)
Q Consensus 621 IrvWDl~t~~------~-~l~~~~g-h~~~V~sl~fspdg~~llaSgs~-------------Dg~IriWDl~tg------ 673 (695)
|..|+..... . .+..+.. .......|+|.|||. |+++.+. .|.|.-+|.+..
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 7788876531 1 1111221 112346799999997 5544332 256666665421
Q ss_pred ---eEEEEEecCCCcEEEEEEeCC
Q 005473 674 ---SCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 674 ---~~v~~~~~h~~~VtsVaf~sP 694 (695)
..+. ..+|..+ ..|+| +|
T Consensus 186 f~~~~i~-a~G~rnp-~Gla~-d~ 206 (354)
T 3a9g_A 186 FPNSPIW-SYGHRNP-QGIDW-HR 206 (354)
T ss_dssp STTCCEE-EECCSCC-CEEEE-CT
T ss_pred CCCCcEE-EEccCCc-ceEEE-eC
Confidence 1222 2356554 56888 77
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.78 E-value=0.022 Score=66.43 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=84.8
Q ss_pred CeEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLLATGGH-D-KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRL-ATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~-D-g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~L-aTgs~DgtIrvWDl~t~~~~l 633 (695)
....|++.|.+.+|+.+.. . +.|.++++........+...-.....|+|+|++..| ++-...+.|.++|++.... .
T Consensus 497 ~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-~ 575 (699)
T 1n7d_A 497 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-K 575 (699)
T ss_dssp CCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-E
T ss_pred CcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce-E
Confidence 4577889987665555443 2 678888876433322222223456789999975555 5555677899999975332 2
Q ss_pred EEEe--cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEEEeCC
Q 005473 634 RTFT--GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~--gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVaf~sP 694 (695)
..+. +.......|++.. ..++++....+.|..+|..+|+.+.++.......+.|+++||
T Consensus 576 ~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 576 TILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQ 636 (699)
T ss_dssp EECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSS
T ss_pred EEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCc
Confidence 2222 1123345566654 357777777899999999899888888654444566665344
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.73 E-value=0.17 Score=56.38 Aligned_cols=136 Identities=13% Similarity=0.145 Sum_probs=86.6
Q ss_pred eEEEEEcC-CCCEEEEEeC-CCcEEEEECCCCeEEEEeccc---CCCeEEEEE-------cCCCCEEEEEeCCC------
Q 005473 558 VESCHFSP-DGKLLATGGH-DKKAVLWCTESFTVKSTLEEH---TQWITDVRF-------SPSLSRLATSSADR------ 619 (695)
Q Consensus 558 V~~v~fsp-dg~~LaSgs~-Dg~V~IWDl~t~~~~~~l~~H---~~~V~~v~~-------spdg~~LaTgs~Dg------ 619 (695)
...|+|+| +...|+.+.. .+.|++.|+.++.....+..- ......|+| ++++..|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56899998 3444555444 467888999887766544321 235889999 99998676665543
Q ss_pred -eEEEEECCC-CCee----EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC-------CCeE-----------
Q 005473 620 -TVRVWDTEN-PDYS----LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN-------NGSC----------- 675 (695)
Q Consensus 620 -tIrvWDl~t-~~~~----l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~-------tg~~----------- 675 (695)
.|.+++... +... ...+... .....++++|++..|+++...++.|+.+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 366776443 1221 0122211 2456788999777788888888999999997 5543
Q ss_pred EEE-Ee-cCCCcEEEEEEeCCC
Q 005473 676 AGV-FK-NFFESFVSVRVVQPR 695 (695)
Q Consensus 676 v~~-~~-~h~~~VtsVaf~sPd 695 (695)
... +. +.......|+| +|+
T Consensus 300 ~~~l~~~~~~~~p~~ia~-~p~ 320 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFI-HPT 320 (496)
T ss_dssp EEEEEECSSSSCCEEEEE-CTT
T ss_pred cceeEecCCCCCceEEEE-cCC
Confidence 112 22 22344578999 885
No 292
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.68 E-value=0.4 Score=51.02 Aligned_cols=141 Identities=11% Similarity=0.058 Sum_probs=81.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE--EEe----cccCCCeEEEEEcCC---CCEEEEE---eCC
Q 005473 551 IPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVK--STL----EEHTQWITDVRFSPS---LSRLATS---SAD 618 (695)
Q Consensus 551 l~~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~--~~l----~~H~~~V~~v~~spd---g~~LaTg---s~D 618 (695)
+...-.....++|.|||+++++--..|.|++++..+++.. ..+ .........|+|+|+ +..|+.. ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3333445789999999997776655899999987655532 222 122456789999995 3444332 234
Q ss_pred CeEEEEECCCC----------CeeEEEEe-cCCCCeEEEEEecCCCeEEEEEe-------------CCCcEEEEECCCC-
Q 005473 619 RTVRVWDTENP----------DYSLRTFT-GHSTTVMSLDFHPSKEDLLCSCD-------------NNSEIRYWSINNG- 673 (695)
Q Consensus 619 gtIrvWDl~t~----------~~~l~~~~-gh~~~V~sl~fspdg~~llaSgs-------------~Dg~IriWDl~tg- 673 (695)
..|.-|.+... +..+..+. +.......|.|.|||. |+++.+ .-|.|.-.+.+..
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 55666665541 11112222 1112356799999997 444533 2356655565422
Q ss_pred --------eEEEEEecCCCcEEEEEEeCCC
Q 005473 674 --------SCAGVFKNFFESFVSVRVVQPR 695 (695)
Q Consensus 674 --------~~v~~~~~h~~~VtsVaf~sPd 695 (695)
..+. -.+|..+ ..|+| +|+
T Consensus 186 p~~nPf~~~~i~-a~G~RNp-~Gla~-dp~ 212 (347)
T 3das_A 186 APGNPFPGSPVY-SYGHRNV-QGLAW-DDK 212 (347)
T ss_dssp CTTCSSTTCCEE-EBCCSBC-CEEEE-CTT
T ss_pred cCCCCCCCCeEE-eeCCCCc-ceEEE-CCC
Confidence 1122 2267655 56888 774
No 293
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.68 E-value=0.15 Score=58.18 Aligned_cols=83 Identities=14% Similarity=0.022 Sum_probs=56.1
Q ss_pred CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCC-eEEEEEecCCCe
Q 005473 576 DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTT-VMSLDFHPSKED 654 (695)
Q Consensus 576 Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~-V~sl~fspdg~~ 654 (695)
+|.|..||+.+++.+.....+. .+..-.....+.++++|+.|+.|+.||.++++. +..+....+. ..-+.|..+|+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~-lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE-LWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCE-EEEecCCCCcccCceEEEECCEE
Confidence 6889999999999887775432 222111122467888899999999999999886 6666543322 223667778876
Q ss_pred EEEEEe
Q 005473 655 LLCSCD 660 (695)
Q Consensus 655 llaSgs 660 (695)
++++.+
T Consensus 543 Yv~~~~ 548 (582)
T 1flg_A 543 YLGVTV 548 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 665443
No 294
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.47 E-value=0.44 Score=52.47 Aligned_cols=105 Identities=17% Similarity=0.155 Sum_probs=61.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEE--EEecc------cCCCeEEEEEcCC---CCEEEEEe-C------
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVK--STLEE------HTQWITDVRFSPS---LSRLATSS-A------ 617 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~--~~l~~------H~~~V~~v~~spd---g~~LaTgs-~------ 617 (695)
....+++|.|+|+++++-...+.|++++..++... ..+.. ..+.+..|+|+|+ +..|..+. .
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 34679999999997776544457888876555432 22321 2356779999995 55554433 2
Q ss_pred ------CCeEEEEECCCCC-------eeEEEEec-CCCCeEEEEEecCCCeEEEEEe
Q 005473 618 ------DRTVRVWDTENPD-------YSLRTFTG-HSTTVMSLDFHPSKEDLLCSCD 660 (695)
Q Consensus 618 ------DgtIrvWDl~t~~-------~~l~~~~g-h~~~V~sl~fspdg~~llaSgs 660 (695)
...|.-|++.... ..+..+.. .......|+|.|||..+++.|+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1346556553321 11111221 1235789999999985554443
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.45 E-value=0.29 Score=55.89 Aligned_cols=105 Identities=10% Similarity=0.013 Sum_probs=71.9
Q ss_pred CCCcEEEEECCCCeEEEEecccCCC-------------------------------------e-EEEEEcCCCCEEEEEe
Q 005473 575 HDKKAVLWCTESFTVKSTLEEHTQW-------------------------------------I-TDVRFSPSLSRLATSS 616 (695)
Q Consensus 575 ~Dg~V~IWDl~t~~~~~~l~~H~~~-------------------------------------V-~~v~~spdg~~LaTgs 616 (695)
.++.|+.+|.++++.+..+...... + ..+++.++..+|+.+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3899999999999998877532111 0 1345667777887776
Q ss_pred CC----------------CeEEEEECCCCCeeEEEEec--CCC-------CeEEEEEe-cCCC--eEEEEEeCCCcEEEE
Q 005473 617 AD----------------RTVRVWDTENPDYSLRTFTG--HST-------TVMSLDFH-PSKE--DLLCSCDNNSEIRYW 668 (695)
Q Consensus 617 ~D----------------gtIrvWDl~t~~~~l~~~~g--h~~-------~V~sl~fs-pdg~--~llaSgs~Dg~IriW 668 (695)
.+ +.|..+|.++++. +..+.. |.. ...-++.. .+|+ .+++.++.+|.|+++
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~-~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~l 338 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEA-KFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTL 338 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCE-EEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCce-eeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEE
Confidence 55 3899999999875 544442 211 11112332 4563 467788999999999
Q ss_pred ECCCCeEEEEEe
Q 005473 669 SINNGSCAGVFK 680 (695)
Q Consensus 669 Dl~tg~~v~~~~ 680 (695)
|.++|+.+..+.
T Consensus 339 D~~tG~~lw~~~ 350 (599)
T 1w6s_A 339 DRTDGALVSANK 350 (599)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECCCCCEeeccc
Confidence 999999987765
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.39 E-value=0.18 Score=53.71 Aligned_cols=122 Identities=11% Similarity=0.150 Sum_probs=78.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCC----CC---EEEEEeC---CCeEEEEECCCCCeeEEE
Q 005473 566 DGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPS----LS---RLATSSA---DRTVRVWDTENPDYSLRT 635 (695)
Q Consensus 566 dg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spd----g~---~LaTgs~---DgtIrvWDl~t~~~~l~~ 635 (695)
...+++....++-+.|||+ .++.+..+.. +.++.|.+.|+ ++ ++++... +.+|++|+++.....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3455666666788999999 7888877753 56777777663 22 3344444 478999977422222555
Q ss_pred Eec------CC-CCeEEEEE--ecC-CCeEEEEEeCCCcEEEEECC-------CCeEEEEEecCCCcEEEEEE
Q 005473 636 FTG------HS-TTVMSLDF--HPS-KEDLLCSCDNNSEIRYWSIN-------NGSCAGVFKNFFESFVSVRV 691 (695)
Q Consensus 636 ~~g------h~-~~V~sl~f--spd-g~~llaSgs~Dg~IriWDl~-------tg~~v~~~~~h~~~VtsVaf 691 (695)
+.. .. ..+..+|+ +|. +..+++....+|.+..|++. +++.+++|.... .+-.+++
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-q~Egcvv 187 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-QTEGMAA 187 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-CEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-CcceEEE
Confidence 422 11 45677777 664 55566677888999999992 346788887554 3344444
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.34 E-value=2.8 Score=47.95 Aligned_cols=115 Identities=9% Similarity=-0.053 Sum_probs=80.2
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCeeE
Q 005473 557 KVESCHFSPDGKLLATG-GHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA--DRTVRVWDTENPDYSL 633 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSg-s~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~--DgtIrvWDl~t~~~~l 633 (695)
....+++.+.+..|+.+ ...+.|.+.+++.......+...-.....|++.|....|+.+.. .+.|...+++....
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-- 158 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-- 158 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--
Confidence 46788888766655544 45688999998765443333344456789999996666655543 56788888875442
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
..+...-.....|++++++..|+++-...+.|..+|+...
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 3333344678899999988878878778889999998754
No 298
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.31 E-value=0.3 Score=56.05 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=51.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEecccCC-CeEEEEEcCCCCEEEEEe-CC-----CeEEEEEC
Q 005473 555 TSKVESCHFSPDGKLLATGGH-DKKAVLWCTESFTVKSTLEEHTQ-WITDVRFSPSLSRLATSS-AD-----RTVRVWDT 626 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~-Dg~V~IWDl~t~~~~~~l~~H~~-~V~~v~~spdg~~LaTgs-~D-----gtIrvWDl 626 (695)
.....++++..++++++.|+. +..|.+||..+.+....-..+.. .-.++++.+++++++.|+ .+ ..+.+||.
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred CCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 333456788889999999984 56899999987654432221211 223455667889999988 44 46999999
Q ss_pred CCCC
Q 005473 627 ENPD 630 (695)
Q Consensus 627 ~t~~ 630 (695)
.+..
T Consensus 322 ~t~~ 325 (656)
T 1k3i_A 322 SSKT 325 (656)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 7654
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.29 E-value=1.6 Score=49.83 Aligned_cols=117 Identities=7% Similarity=-0.062 Sum_probs=80.9
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCee
Q 005473 556 SKVESCHFSPDGKLLATGG-HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA--DRTVRVWDTENPDYS 632 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs-~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~--DgtIrvWDl~t~~~~ 632 (695)
.....+++.+.++.|+.+. ..+.|.+.+++.......+...-.....|++.|.+..|+.+.. .+.|...+++....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~- 162 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR- 162 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-
Confidence 4578999999666555554 5689999999765443334344556779999997666655543 46777777774332
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
.......-.....|++++++..|+++-...+.|..+|+...
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 22222334567899999987878877777889999998753
No 300
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.15 E-value=0.76 Score=47.76 Aligned_cols=134 Identities=14% Similarity=0.121 Sum_probs=75.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE-EEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeE
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTV-KSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSL 633 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~-~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l 633 (695)
.+.+.+|.+.++++.++++ .++.|.. ..+.++. ......+...+..+.+.+++.+++.+...+.++-+|-..... .
T Consensus 121 ~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW-~ 197 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAW-E 197 (327)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSC-E
T ss_pred CCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCce-e
Confidence 3457788887777766655 4554432 2222332 222345566789999999888887775554455555311111 1
Q ss_pred EEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe-c---CCCcEEEEEEeCC
Q 005473 634 RTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK-N---FFESFVSVRVVQP 694 (695)
Q Consensus 634 ~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~-~---h~~~VtsVaf~sP 694 (695)
..-......+..+.+.+++. ++ .++.+|.|++++.+.|+.-..+. . +...+.+|+| .|
T Consensus 198 ~~~~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~-~~ 259 (327)
T 2xbg_A 198 PHNRTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAY-RT 259 (327)
T ss_dssp EEECCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEE-SS
T ss_pred ECCCCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEe-cC
Confidence 11234456788999999876 44 34457888877533233222222 1 2234677777 54
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.00 E-value=1.2 Score=51.84 Aligned_cols=130 Identities=8% Similarity=-0.037 Sum_probs=83.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe---cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCe
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL---EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDY 631 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l---~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~ 631 (695)
...|.++...++|++. .|+.++-|.+||..++...... ......|.++...+++.+ ..|+.++.|.+||.++++
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~- 438 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKK- 438 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCE-
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCc-
Confidence 3469999998888754 5565566888998754432111 123467999988877654 446777789999988654
Q ss_pred eEEEEe---cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecC-----CCcEEEEEE
Q 005473 632 SLRTFT---GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNF-----FESFVSVRV 691 (695)
Q Consensus 632 ~l~~~~---gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h-----~~~VtsVaf 691 (695)
+..+. .....|.++...++|. ++ .|+. +-|.+||..+++........ ...|.+|..
T Consensus 439 -~~~~~~~~~~~~~v~~i~~d~~g~-lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 439 -FQIIELEKNELLDVRVFYEDKNKK-IW-IGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp -EEECCSTTTCCCCEEEEEECTTSE-EE-EEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred -EEEeccCCCCCCeEEEEEECCCCC-EE-EEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 23332 1345789998888876 44 3444 56889998876554433222 356777765
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.99 E-value=0.52 Score=52.55 Aligned_cols=115 Identities=11% Similarity=0.075 Sum_probs=74.0
Q ss_pred CCeEEEEE-------cCCCCEEEEEeCCC-------cEEEEECCC-CeEE-----EEecccCCCeEEEEEcCC-CCEEEE
Q 005473 556 SKVESCHF-------SPDGKLLATGGHDK-------KAVLWCTES-FTVK-----STLEEHTQWITDVRFSPS-LSRLAT 614 (695)
Q Consensus 556 ~~V~~v~f-------spdg~~LaSgs~Dg-------~V~IWDl~t-~~~~-----~~l~~H~~~V~~v~~spd-g~~LaT 614 (695)
.....|+| +++|+.|+++...+ .|.+++... +... ..+... .....++++|+ +.++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 35789999 99999777776554 255665333 1221 222221 23457788995 555566
Q ss_pred EeCCCeEEEEECC-------CCCe-----e-----EEE-E-ecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC
Q 005473 615 SSADRTVRVWDTE-------NPDY-----S-----LRT-F-TGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 615 gs~DgtIrvWDl~-------t~~~-----~-----l~~-~-~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~ 671 (695)
-..++.|+.+|+. ++.. + ... + .+...+.+.|+|+|+|..++++-...+.|+.+|..
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 6678889999997 4432 0 111 1 22334568999999999777777778899996653
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.94 E-value=1.9 Score=44.62 Aligned_cols=132 Identities=11% Similarity=0.182 Sum_probs=77.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC
Q 005473 553 ASTSKVESCHFSPDGKLLATGGHDKKAVLWCT--ESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPD 630 (695)
Q Consensus 553 ~H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl--~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~ 630 (695)
.+...+.++.+.+++++++.+...+.++-+|- .+.+.+ -......+..+.+.+++.+++ ++.+|.|++++.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~ 236 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSE 236 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCC
Confidence 44557899999999988877654444444453 233333 234456788999999876654 4567888887533221
Q ss_pred eeEEEEe-c---CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec---CCCcEEEEEE
Q 005473 631 YSLRTFT-G---HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN---FFESFVSVRV 691 (695)
Q Consensus 631 ~~l~~~~-g---h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~---h~~~VtsVaf 691 (695)
. -..+. . +...+.++.|.+++. +++++. +|.| ++..+.|+.=..+.. +...+.+|.|
T Consensus 237 t-W~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~ 300 (327)
T 2xbg_A 237 N-WGELLSPLRRNSVGFLDLAYRTPNE-VWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILF 300 (327)
T ss_dssp E-ECCCBCTTSSCCSCEEEEEESSSSC-EEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEE
T ss_pred e-eEeccCCcccCCcceEEEEecCCCE-EEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEE
Confidence 1 11111 1 223588999998765 565554 6766 455555543333331 2345566666
No 304
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.85 E-value=0.79 Score=53.48 Aligned_cols=132 Identities=8% Similarity=-0.033 Sum_probs=83.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEec--ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCe
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDY 631 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~--~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~ 631 (695)
....|.++...++|++.+ |+.++-|.+||..+++...... .....|.++...+++. |..|+. +.|.+||..++..
T Consensus 405 ~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 405 LSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKV 481 (781)
T ss_dssp CCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSC
T ss_pred CCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeE
Confidence 345699999988887554 6666678999987766543221 1346799998888765 444555 5689999887553
Q ss_pred eEEEEecC-----CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec---CCCcEEEEEE
Q 005473 632 SLRTFTGH-----STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN---FFESFVSVRV 691 (695)
Q Consensus 632 ~l~~~~gh-----~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~---h~~~VtsVaf 691 (695)
....... ...|.++...++|. ++ .|+.++-|..||..+++....... ....|.+|..
T Consensus 482 -~~~~~~~~~~~~~~~i~~i~~d~~g~-lW-igt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 546 (781)
T 3v9f_A 482 -IHHYDTSNSQLLENFVRSIAQDSEGR-FW-IGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYR 546 (781)
T ss_dssp -CEEECTTTSSCSCSCEEEEEECTTCC-EE-EEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEE
T ss_pred -EecccCcccccccceeEEEEEcCCCC-EE-EEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEE
Confidence 2222111 35789999998887 44 344434477899876654332211 1345666665
No 305
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.74 E-value=0.088 Score=61.35 Aligned_cols=114 Identities=9% Similarity=-0.046 Sum_probs=74.6
Q ss_pred eEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEECCCCCeeEE
Q 005473 558 VESCHFSPDG-KLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA-D-RTVRVWDTENPDYSLR 634 (695)
Q Consensus 558 V~~v~fspdg-~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~-D-gtIrvWDl~t~~~~l~ 634 (695)
...|++.+.+ +++++-...+.|.++++........+.........|++.|.+.+|+.+.. . +.|.+++++.... ..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YS 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CE
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eE
Confidence 4567887544 44444455788999998765544444333345678899997655554433 2 6788888764332 12
Q ss_pred EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 635 TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
.+...-.....|+|+|++..|+++-...+.|.++|+..
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 22222345678999998887888887888999999864
No 306
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.60 E-value=0.27 Score=52.08 Aligned_cols=113 Identities=15% Similarity=0.102 Sum_probs=64.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe-------cccCCCeEEEEEcCC---CCEEEEE-eC-------C
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL-------EEHTQWITDVRFSPS---LSRLATS-SA-------D 618 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l-------~~H~~~V~~v~~spd---g~~LaTg-s~-------D 618 (695)
....|+|.|+|+.|+.+..+|.|++++.. +.....+ ....+....|+|+|+ +..|+.+ .. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 36899999999944455668999999854 3321111 112345689999996 4555443 22 2
Q ss_pred CeEEEEECCCCC--e-eEE-EEecC------CCCeEEEEEecCCCeEEEEEeC-------------CCcEEEEECC
Q 005473 619 RTVRVWDTENPD--Y-SLR-TFTGH------STTVMSLDFHPSKEDLLCSCDN-------------NSEIRYWSIN 671 (695)
Q Consensus 619 gtIrvWDl~t~~--~-~l~-~~~gh------~~~V~sl~fspdg~~llaSgs~-------------Dg~IriWDl~ 671 (695)
..|..|++.... . ... .+.+. ......|.|.|||. |+++.+. .|.|.-+|.+
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 356666665331 1 011 11111 11246799999995 5545432 2467777765
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.13 E-value=10 Score=43.24 Aligned_cols=116 Identities=6% Similarity=-0.045 Sum_probs=77.4
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCee
Q 005473 556 SKVESCHFSPDGKLLATG-GHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSA--DRTVRVWDTENPDYS 632 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSg-s~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~--DgtIrvWDl~t~~~~ 632 (695)
.....+++...++.|+.+ ...+.|.+.+++.......+...-.....|++.|....|+.+.. ...|...+++....
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~- 470 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR- 470 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-
T ss_pred CCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-
Confidence 456789998755545444 45788999998765433333334456889999997555544432 36777777764332
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
.......-.....|++++++..|+++-...+.|..+|+..
T Consensus 471 ~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 471 VVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred EEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence 2223333457889999998777877767778899999864
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.81 E-value=12 Score=42.83 Aligned_cols=133 Identities=9% Similarity=0.011 Sum_probs=84.3
Q ss_pred CCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeEEEEe-cccCCCeEEEEEcCC-CCEEEEEeCCC--eEEEEECCCCC
Q 005473 556 SKVESCHFSPDGKLLA-TGGHDKKAVLWCTESFTVKSTL-EEHTQWITDVRFSPS-LSRLATSSADR--TVRVWDTENPD 630 (695)
Q Consensus 556 ~~V~~v~fspdg~~La-Sgs~Dg~V~IWDl~t~~~~~~l-~~H~~~V~~v~~spd-g~~LaTgs~Dg--tIrvWDl~t~~ 630 (695)
..+..+++...++.|+ +-+..+.|.+.+++. +...++ .........|++.|. |.+++|-.... .|...+++...
T Consensus 389 ~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G-~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~ 467 (628)
T 4a0p_A 389 IQPYDLSIDIYSRYIYWTCEATNVINVTRLDG-RSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE 467 (628)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS
T ss_pred CCcceEEeeccCCeEEEEcCCCCEEEEEECCC-CeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC
Confidence 4578999999877555 545678899999864 444343 344567899999995 54455543332 57777776433
Q ss_pred eeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe-cCCCcEEEEEE
Q 005473 631 YSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK-NFFESFVSVRV 691 (695)
Q Consensus 631 ~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~-~h~~~VtsVaf 691 (695)
. .......-.....|++++++..|+++-+..+.|..+|++. ...+++. .......+|++
T Consensus 468 ~-~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG-~~r~~~~~~~~~~P~glav 527 (628)
T 4a0p_A 468 R-EVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSG-ANRIVLEDSNILQPVGLTV 527 (628)
T ss_dssp C-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSCEEEEEE
T ss_pred c-EEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCC-CceEEEEcCCCCCcEEEEE
Confidence 2 2223333456799999998777777766678999999853 3333333 22223345543
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.61 E-value=1.4 Score=46.87 Aligned_cols=134 Identities=16% Similarity=0.241 Sum_probs=78.4
Q ss_pred eeeeEEEecCCC-CCeEEEEEcCCCCEEEEEeC---C------------CcEEEEECCCCeEEEEecccCCCeEEEEEcC
Q 005473 544 TFTEFQLIPAST-SKVESCHFSPDGKLLATGGH---D------------KKAVLWCTESFTVKSTLEEHTQWITDVRFSP 607 (695)
Q Consensus 544 ~~~~v~~l~~H~-~~V~~v~fspdg~~LaSgs~---D------------g~V~IWDl~t~~~~~~l~~H~~~V~~v~~sp 607 (695)
....+..+.+.. ...+.+++.++|+++++... | ..-+||.+..+++. .+...-..-+.|+|+|
T Consensus 152 ~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~-~~~~~l~~pNGia~sp 230 (355)
T 3sre_A 152 SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR-VVAEGFDFANGINISP 230 (355)
T ss_dssp EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCE-EEEEEESSEEEEEECT
T ss_pred EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEE-EeecCCcccCcceECC
Confidence 344555555432 34789999999998777641 1 23344444444433 2322345678999999
Q ss_pred CCCEEEEE-eCCCeEEEEECCCCC-ee-EEEEecCCCCeEEEEEec-CCCeEEEEEeCC-CcEEEEECC--CCeEEEEEe
Q 005473 608 SLSRLATS-SADRTVRVWDTENPD-YS-LRTFTGHSTTVMSLDFHP-SKEDLLCSCDNN-SEIRYWSIN--NGSCAGVFK 680 (695)
Q Consensus 608 dg~~LaTg-s~DgtIrvWDl~t~~-~~-l~~~~gh~~~V~sl~fsp-dg~~llaSgs~D-g~IriWDl~--tg~~v~~~~ 680 (695)
|++.|+.+ +..+.|+.||++... .. .+.+ ...+..-.+++.+ +|. +++++..+ +.|..||.. .++.+..+.
T Consensus 231 Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 231 DGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCc-EEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 99877665 457899999997432 21 2233 2345667788898 587 55555433 344444433 244444443
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.41 E-value=2.7 Score=44.44 Aligned_cols=122 Identities=17% Similarity=0.231 Sum_probs=87.3
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecC
Q 005473 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGH 639 (695)
Q Consensus 560 ~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh 639 (695)
+.-.+|..+.||.-. ..++.|+|+++...++.+.- ...|.-=+|-.+ +.|+-.+ +..|+-|++.....+++.|..|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 445578888777766 68899999999888877764 346666677554 4444443 5689999998766778888877
Q ss_pred C----CCeEEEEEecCCCeEEEEEe------CCCcEEEEECCCCeEEEEEecCCCcE
Q 005473 640 S----TTVMSLDFHPSKEDLLCSCD------NNSEIRYWSINNGSCAGVFKNFFESF 686 (695)
Q Consensus 640 ~----~~V~sl~fspdg~~llaSgs------~Dg~IriWDl~tg~~v~~~~~h~~~V 686 (695)
. ..|..-..+++.++++++|- -.|.+.+|.++.+ .-..+.||....
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F 202 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASF 202 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEE
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeee
Confidence 5 34667777889998887774 3478999998753 555566665443
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.25 E-value=2.1 Score=43.13 Aligned_cols=106 Identities=11% Similarity=0.065 Sum_probs=58.8
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeEEEEe--cccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCeeE
Q 005473 566 DGKLLATGGHD-----KKAVLWCTESFTVKSTL--EEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENPDYSL 633 (695)
Q Consensus 566 dg~~LaSgs~D-----g~V~IWDl~t~~~~~~l--~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~~~~l 633 (695)
++++++.|+.+ ..|.+||..+.+-...- ........++.+ ++.+++.|+.+ ..|.+||+.+.....
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 67777777754 45889998876544321 111111222333 45677777654 468999998765421
Q ss_pred E-EEecCCCCeEEEEEecCCCeEEEEEeCC-----CcEEEEECCCCeEE
Q 005473 634 R-TFTGHSTTVMSLDFHPSKEDLLCSCDNN-----SEIRYWSINNGSCA 676 (695)
Q Consensus 634 ~-~~~gh~~~V~sl~fspdg~~llaSgs~D-----g~IriWDl~tg~~v 676 (695)
. .+........++. . ++ .+++.|+.+ ..|.+||+.+.+..
T Consensus 237 ~~~~p~~r~~~~~~~-~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 237 VTSMTTPRCYVGATV-L-RG-RLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp ECCCSSCCBSCEEEE-E-TT-EEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred CCCCCCcccceeEEE-E-CC-EEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 1 1111111112222 2 44 477777755 46889999887543
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.38 E-value=4.5 Score=42.90 Aligned_cols=112 Identities=11% Similarity=0.051 Sum_probs=71.0
Q ss_pred CeEEEEEcC--CCC-EEEEEeC---CCcEEEEECCCC--e--EEEEeccc-CCCeEEEEEcCCCCEEEEEeC--------
Q 005473 557 KVESCHFSP--DGK-LLATGGH---DKKAVLWCTESF--T--VKSTLEEH-TQWITDVRFSPSLSRLATSSA-------- 617 (695)
Q Consensus 557 ~V~~v~fsp--dg~-~LaSgs~---Dg~V~IWDl~t~--~--~~~~l~~H-~~~V~~v~~spdg~~LaTgs~-------- 617 (695)
....+.+.+ +++ +|+.+.. +.+|-||+++.. . .+..+.+. -...+++.+.++|.++++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 355666644 454 4545432 467778776542 2 23344432 245789999999988777641
Q ss_pred ---------CCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 618 ---------DRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 618 ---------DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
.|.|..||.. . +..+...-.....++|+||++.++++-+..+.|+.||+..
T Consensus 193 ~~e~~~~~~~g~vyr~d~~--~--~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSPN--D--VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHTTCCCEEEEEECTT--C--CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cchhhccCCccEEEEEECC--e--EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 2445555553 2 2222222345789999999998888888889999999863
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.33 E-value=10 Score=41.57 Aligned_cols=130 Identities=10% Similarity=0.195 Sum_probs=83.1
Q ss_pred CCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCeEEEEecccCCCeEEEEEcCC---CCEEEEEeC---CCeEE
Q 005473 556 SKVESCHFSPDGKLLATGG-------HDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPS---LSRLATSSA---DRTVR 622 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs-------~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spd---g~~LaTgs~---DgtIr 622 (695)
..|..-..+++.++++..| -.|.+-+|.++. +.-..++||.+....+.+.-+ ..++..+.. .++++
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 3466677788888766443 247788999875 445678888766655554322 123444444 37899
Q ss_pred EEECCCC--------CeeEEEEec---CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEE
Q 005473 623 VWDTENP--------DYSLRTFTG---HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFV 687 (695)
Q Consensus 623 vWDl~t~--------~~~l~~~~g---h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~Vt 687 (695)
|-++... +..+..+.. -.+.-.++..++.-. +++.-+.-|.|++||+.++.|+..-+-..++|-
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccceeeeeecccCCceE
Confidence 9998653 111111211 134456788888766 566778899999999999999877664444443
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.96 E-value=9.1 Score=40.39 Aligned_cols=130 Identities=10% Similarity=0.186 Sum_probs=81.3
Q ss_pred CCeEEEEEcCCCCEEEEEeC-------CCcEEEEECCCCeEEEEecccCCCeEEEEEcCC--C-CEEEEEeC---CCeEE
Q 005473 556 SKVESCHFSPDGKLLATGGH-------DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPS--L-SRLATSSA---DRTVR 622 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~-------Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spd--g-~~LaTgs~---DgtIr 622 (695)
..|..-..+++.++++..+- .|.+.+|.++. +.-..++||......+.+.-+ . .+++.+.. .++++
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 230 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 230 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 34666777888887655442 37788999875 445678888665544443221 1 23333332 25899
Q ss_pred EEECCCC--C------eeEEEEecC---CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEE
Q 005473 623 VWDTENP--D------YSLRTFTGH---STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFV 687 (695)
Q Consensus 623 vWDl~t~--~------~~l~~~~gh---~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~Vt 687 (695)
|-++... . ..+..+... .+.-.++..++.-. +++.-+.-|.|++||+.+|.|+..-+-..++|-
T Consensus 231 IiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 231 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp EEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCcEEEEeccCCCceE
Confidence 9998543 1 112222211 34456777787766 566777889999999999999987765555554
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.80 E-value=2.5 Score=42.68 Aligned_cols=106 Identities=12% Similarity=0.113 Sum_probs=58.1
Q ss_pred CCCEEEEEeCC-------CcEEEEECCCCeEEEEe--cccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCe
Q 005473 566 DGKLLATGGHD-------KKAVLWCTESFTVKSTL--EEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENPDY 631 (695)
Q Consensus 566 dg~~LaSgs~D-------g~V~IWDl~t~~~~~~l--~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~~~ 631 (695)
++++++.|+.+ ..|.+||+.+.+-...- ........++.+ ++.+++.|+.+ ..|.+||+.+...
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 56666666543 35889999876543321 111111222323 46677777654 3699999987554
Q ss_pred eEEEEecC--CCCeEEEEEecCCCeEEEEEeCCC-----cEEEEECCCCeEEE
Q 005473 632 SLRTFTGH--STTVMSLDFHPSKEDLLCSCDNNS-----EIRYWSINNGSCAG 677 (695)
Q Consensus 632 ~l~~~~gh--~~~V~sl~fspdg~~llaSgs~Dg-----~IriWDl~tg~~v~ 677 (695)
. .+... ...-.+++.. ++ .+++.|+.++ .|.+||+.+.+...
T Consensus 233 ~--~~~~~~~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 233 R--QVADMNMCRRNAGVCAV-NG-LLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp E--EECCCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred e--eCCCCCCccccCeEEEE-CC-EEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 2 11111 1111122222 44 4777777553 48999998876543
No 316
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.54 E-value=5 Score=43.97 Aligned_cols=124 Identities=16% Similarity=0.221 Sum_probs=87.1
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecC
Q 005473 560 SCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGH 639 (695)
Q Consensus 560 ~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh 639 (695)
+.-.+|..+.||.-. ..++.|||+++...++.+.-.. .|.-=+|-.+ +.|+..+ +..|+-|++.....+++.|..|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhheecc
Confidence 455677777776665 7889999999988887776544 4555566443 4554443 5689999998766778888877
Q ss_pred C----CCeEEEEEecCCCeEEEEEe------CCCcEEEEECCCCeEEEEEecCCCcEEE
Q 005473 640 S----TTVMSLDFHPSKEDLLCSCD------NNSEIRYWSINNGSCAGVFKNFFESFVS 688 (695)
Q Consensus 640 ~----~~V~sl~fspdg~~llaSgs------~Dg~IriWDl~tg~~v~~~~~h~~~Vts 688 (695)
. ..|..-..+++.+|++++|- -.|.+.+|.++. +.-..+.||.....+
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~ 203 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQ 203 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEE
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEE
Confidence 5 34667777899998887764 357899999875 345556666544433
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.49 E-value=14 Score=38.94 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=54.4
Q ss_pred CCCeEEEEEcCC---CCEEEEE---eCCCcEEEEECCC----------CeEEE-Eec-ccCCCeEEEEEcCCCCEEEEEe
Q 005473 555 TSKVESCHFSPD---GKLLATG---GHDKKAVLWCTES----------FTVKS-TLE-EHTQWITDVRFSPSLSRLATSS 616 (695)
Q Consensus 555 ~~~V~~v~fspd---g~~LaSg---s~Dg~V~IWDl~t----------~~~~~-~l~-~H~~~V~~v~~spdg~~LaTgs 616 (695)
......|+|+|+ +.+|+.. ..+..|.-|.+.. .+.+. .+. ........|.|.|+|.++++.+
T Consensus 79 ~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 79 EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 445789999995 3444432 2344555565543 12221 221 1122346799999998877754
Q ss_pred C-------------CCeEEEEECCCC--------CeeEEEEecCCCCeEEEEEecCCCeEE
Q 005473 617 A-------------DRTVRVWDTENP--------DYSLRTFTGHSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 617 ~-------------DgtIrvWDl~t~--------~~~l~~~~gh~~~V~sl~fspdg~~ll 656 (695)
. .|.|.-.+.+.. .. .....||. ....++|+|+|. |+
T Consensus 159 d~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~-~i~a~G~R-Np~Gla~dp~G~-L~ 216 (347)
T 3das_A 159 ESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGS-PVYSYGHR-NVQGLAWDDKQR-LF 216 (347)
T ss_dssp CTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTC-CEEEBCCS-BCCEEEECTTCC-EE
T ss_pred CCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCC-eEEeeCCC-CcceEEECCCCC-EE
Confidence 2 244554555432 11 12223553 356899999876 44
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.40 E-value=0.57 Score=46.75 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=64.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeE------EEEe--cccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTV------KSTL--EEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN 628 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~------~~~l--~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t 628 (695)
.+.+++|+|+|.+.++ .+|.+.-.+..+... -..+ .+-.. ..++.|.|+|.+.++ .||.|+-|+..+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5779999999986666 677776666544211 1122 12222 578999999988877 469998887643
Q ss_pred CCee------EEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEE
Q 005473 629 PDYS------LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWS 669 (695)
Q Consensus 629 ~~~~------l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWD 669 (695)
...- ...-.+-=..+..|.|.|+|. |.+.. |+.++-+.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKAL 160 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEEC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecC
Confidence 2210 111111114579999999987 55343 77764433
No 319
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.38 E-value=14 Score=40.30 Aligned_cols=118 Identities=16% Similarity=0.104 Sum_probs=63.6
Q ss_pred CCCeEEEEEcCC---CCEEEEEeC-------------CCcEEEEECCCC-------eEEE-Eec-ccCCCeEEEEEcCCC
Q 005473 555 TSKVESCHFSPD---GKLLATGGH-------------DKKAVLWCTESF-------TVKS-TLE-EHTQWITDVRFSPSL 609 (695)
Q Consensus 555 ~~~V~~v~fspd---g~~LaSgs~-------------Dg~V~IWDl~t~-------~~~~-~l~-~H~~~V~~v~~spdg 609 (695)
...+..|+|+|+ +.+|+.+.. ...|.-|+.... +.+. .+. ........|+|.|+|
T Consensus 76 ~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG 155 (454)
T 1cru_A 76 QNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ 155 (454)
T ss_dssp SCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS
T ss_pred CCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC
Confidence 455789999995 555554432 124555554321 1111 121 122357899999999
Q ss_pred CEEEEEeCC--------------------------------CeEEEEECCCCC----------eeEEEEecCCCCeEEEE
Q 005473 610 SRLATSSAD--------------------------------RTVRVWDTENPD----------YSLRTFTGHSTTVMSLD 647 (695)
Q Consensus 610 ~~LaTgs~D--------------------------------gtIrvWDl~t~~----------~~l~~~~gh~~~V~sl~ 647 (695)
.++++.+.. |.|.-+|.+..- .......+| .....++
T Consensus 156 ~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~-RNp~gla 234 (454)
T 1cru_A 156 KIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGH-RNPQGLA 234 (454)
T ss_dssp CEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCC-SEEEEEE
T ss_pred eEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECC-CCcceEE
Confidence 887775531 334444443210 111222344 3478899
Q ss_pred EecCCCeEEEEEeCCCcEEEEECCCC
Q 005473 648 FHPSKEDLLCSCDNNSEIRYWSINNG 673 (695)
Q Consensus 648 fspdg~~llaSgs~Dg~IriWDl~tg 673 (695)
|+|+|..+++--+.++.-.|.-+..|
T Consensus 235 ~dp~G~L~~~d~g~~~~dein~i~~G 260 (454)
T 1cru_A 235 FTPNGKLLQSEQGPNSDDEINLIVKG 260 (454)
T ss_dssp ECTTSCEEEEEECSSSCEEEEECCTT
T ss_pred ECCCCCEEEEecCCCCCeEEEEecCC
Confidence 99987755544455555555555543
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.35 E-value=3.4 Score=41.48 Aligned_cols=106 Identities=10% Similarity=0.099 Sum_probs=58.0
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeEEEE--ecccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCeeE
Q 005473 566 DGKLLATGGHD-----KKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENPDYSL 633 (695)
Q Consensus 566 dg~~LaSgs~D-----g~V~IWDl~t~~~~~~--l~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~~~~l 633 (695)
++++++.|+.+ ..+.+||..+.+-... +........++.+ ++.+++.|+.+ ..+.+||+.+.....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56777777654 3588899887654332 2111111222222 56677777654 458999998765421
Q ss_pred E-EEecCCCCeEEEEEecCCCeEEEEEeCC-----CcEEEEECCCCeEE
Q 005473 634 R-TFTGHSTTVMSLDFHPSKEDLLCSCDNN-----SEIRYWSINNGSCA 676 (695)
Q Consensus 634 ~-~~~gh~~~V~sl~fspdg~~llaSgs~D-----g~IriWDl~tg~~v 676 (695)
. .+. ....-.+++.. + ..+++.|+.+ ..|.+||+.+.+..
T Consensus 190 ~~~~p-~~r~~~~~~~~-~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 190 VTPMA-TKRSGAGVALL-N-DHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp ECCCS-SCCBSCEEEEE-T-TEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCCC-cccccceEEEE-C-CEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 1 111 11111122222 3 3477777754 46899999877544
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.83 E-value=3.7 Score=41.31 Aligned_cols=106 Identities=11% Similarity=0.128 Sum_probs=56.8
Q ss_pred CCCEEEEEeCCC-----cEEEEECCCCeEEEEe--cccCCCeEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCCe
Q 005473 566 DGKLLATGGHDK-----KAVLWCTESFTVKSTL--EEHTQWITDVRFSPSLSRLATSSAD-------RTVRVWDTENPDY 631 (695)
Q Consensus 566 dg~~LaSgs~Dg-----~V~IWDl~t~~~~~~l--~~H~~~V~~v~~spdg~~LaTgs~D-------gtIrvWDl~t~~~ 631 (695)
++++++.|+.++ .+.+||..+.+-...- ........++.+ ++.+++.|+.+ ..+.+||+.+...
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 567777777653 5778898776543321 111111222222 45666776542 3589999987653
Q ss_pred eEE-EEecCCCCeEEEEEecCCCeEEEEEeCC-----CcEEEEECCCCeEE
Q 005473 632 SLR-TFTGHSTTVMSLDFHPSKEDLLCSCDNN-----SEIRYWSINNGSCA 676 (695)
Q Consensus 632 ~l~-~~~gh~~~V~sl~fspdg~~llaSgs~D-----g~IriWDl~tg~~v 676 (695)
... .+...... .+++.. ++ .+++.|+.+ ..|.+||+.+.+..
T Consensus 186 ~~~~~~p~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 186 TYIAEMSTRRSG-AGVGVL-NN-LLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp EEECCCSSCCBS-CEEEEE-TT-EEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred EECCCCcccccc-ccEEEE-CC-EEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 211 11111111 122222 33 477777754 36999999876543
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.70 E-value=4.8 Score=40.59 Aligned_cols=106 Identities=12% Similarity=0.129 Sum_probs=56.6
Q ss_pred CCCEEEEEeCC------CcEEEEECCCCeEEEEec--ccCCCeEEEEEcCCCCEEEEEeC---------CCeEEEEECCC
Q 005473 566 DGKLLATGGHD------KKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSA---------DRTVRVWDTEN 628 (695)
Q Consensus 566 dg~~LaSgs~D------g~V~IWDl~t~~~~~~l~--~H~~~V~~v~~spdg~~LaTgs~---------DgtIrvWDl~t 628 (695)
++++++.|+.+ ..+.+||..+.+-...-. .......++.+ ++.+++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 67777777765 468899998765433211 11111122222 5566677653 34588999987
Q ss_pred CCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCC-----CcEEEEECCCCeE
Q 005473 629 PDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNN-----SEIRYWSINNGSC 675 (695)
Q Consensus 629 ~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~D-----g~IriWDl~tg~~ 675 (695)
.......-......-.+++.. ++ .+++.|+.+ ..|.+||+.+.+.
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred CeEEECCCccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 653211100111111222222 33 466677643 4689999987653
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.28 E-value=0.65 Score=49.19 Aligned_cols=113 Identities=6% Similarity=0.006 Sum_probs=71.1
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEeccc-CCCeEEEEEc--CCCCEEEEE--eCCCeEEEEECCCCCeeEEEEec----
Q 005473 568 KLLATGGHDKKAVLWCTESFTVKSTLEEH-TQWITDVRFS--PSLSRLATS--SADRTVRVWDTENPDYSLRTFTG---- 638 (695)
Q Consensus 568 ~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H-~~~V~~v~~s--pdg~~LaTg--s~DgtIrvWDl~t~~~~l~~~~g---- 638 (695)
.+++.++.||.|.-+|..+|+.+..+... ..++....-. +.+..++.+ ..||.|..+|..++.. ...+.-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~-~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ-KLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-EEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-Eeeeccccce
Confidence 36889999999999999999999998654 1233222111 112244433 5799999999987643 222221
Q ss_pred CCCCeEE---EEE-ec---CCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 639 HSTTVMS---LDF-HP---SKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 639 h~~~V~s---l~f-sp---dg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
..+++.. ..+ .+ .....+++|+.+|.+...|+++|+.+..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1111211 000 00 0123567899999999999999999998873
No 324
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=89.60 E-value=19 Score=37.68 Aligned_cols=100 Identities=12% Similarity=0.100 Sum_probs=56.5
Q ss_pred CCeEEEEEcCC---CCEEEEEeC----C----CcEEEEECCCC-------eEE-EEec-ccCCCeEEEEEcCCCCEEEEE
Q 005473 556 SKVESCHFSPD---GKLLATGGH----D----KKAVLWCTESF-------TVK-STLE-EHTQWITDVRFSPSLSRLATS 615 (695)
Q Consensus 556 ~~V~~v~fspd---g~~LaSgs~----D----g~V~IWDl~t~-------~~~-~~l~-~H~~~V~~v~~spdg~~LaTg 615 (695)
.....|+|+|+ +..|+.+.. + ..|..|+.... +.+ ..+. +.......|+|.|+|.++++.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 45789999997 555554433 3 56777776543 111 1122 111234679999999877764
Q ss_pred eC-------------CCeEEEEECCCC--------CeeEEEEecCCCCeEEEEEec-CCCeEEEE
Q 005473 616 SA-------------DRTVRVWDTENP--------DYSLRTFTGHSTTVMSLDFHP-SKEDLLCS 658 (695)
Q Consensus 616 s~-------------DgtIrvWDl~t~--------~~~l~~~~gh~~~V~sl~fsp-dg~~llaS 658 (695)
+. .|.|.-+|.+.. .. .....+|. ....++|+| ++. |+++
T Consensus 153 G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~-~i~a~G~r-np~Gla~d~~~g~-l~v~ 214 (354)
T 3a9g_A 153 GDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNS-PIWSYGHR-NPQGIDWHRASGV-MVAT 214 (354)
T ss_dssp CCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTC-CEEEECCS-CCCEEEECTTTCC-EEEE
T ss_pred CCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCC-cEEEEccC-CcceEEEeCCCCC-EEEE
Confidence 42 245666665532 11 12223443 356899999 555 5544
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.48 E-value=5.2 Score=40.33 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=57.4
Q ss_pred CCCEEEEEeC---------CCcEEEEECCCCeEEEEec--ccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q 005473 566 DGKLLATGGH---------DKKAVLWCTESFTVKSTLE--EHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENP 629 (695)
Q Consensus 566 dg~~LaSgs~---------Dg~V~IWDl~t~~~~~~l~--~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~ 629 (695)
++++++.|+. -..+.+||..+.+-...-. ........+.+ ++.+++.|+.+ ..|.+||+.+.
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 5666666654 2458899998765433211 11111122222 55677777653 35899999875
Q ss_pred CeeE-EEEecCCCCeEEEEEecCCCeEEEEEeCC-----CcEEEEECCCCeEE
Q 005473 630 DYSL-RTFTGHSTTVMSLDFHPSKEDLLCSCDNN-----SEIRYWSINNGSCA 676 (695)
Q Consensus 630 ~~~l-~~~~gh~~~V~sl~fspdg~~llaSgs~D-----g~IriWDl~tg~~v 676 (695)
.... ..+........++.+ + ..+++.|+.+ ..|.+||+.+.+..
T Consensus 227 ~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 227 EWKMVSPMPWKGVTVKCAAV--G-SIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp EEEECCCCSCCBSCCEEEEE--T-TEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred cEEECCCCCCCccceeEEEE--C-CEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 4311 111111112222333 3 3477788744 57899999887543
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=88.54 E-value=5.1 Score=41.98 Aligned_cols=73 Identities=10% Similarity=0.140 Sum_probs=48.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCe-eEEEEe---cCCCCeEEEEEecC---CCeEEEEEeCC-----CcE
Q 005473 598 QWITDVRFSPSLSRLATSSADRTVRVWDTENPDY-SLRTFT---GHSTTVMSLDFHPS---KEDLLCSCDNN-----SEI 665 (695)
Q Consensus 598 ~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~-~l~~~~---gh~~~V~sl~fspd---g~~llaSgs~D-----g~I 665 (695)
.....|+|.|+|+++++ ..++.|++++ .+.. .+..+. ........|+|+|+ +..++++...+ +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 35679999999986555 5679999998 3332 122111 12356889999998 55566665543 678
Q ss_pred EEEECCCC
Q 005473 666 RYWSINNG 673 (695)
Q Consensus 666 riWDl~tg 673 (695)
..|+...+
T Consensus 108 ~r~~~~~~ 115 (352)
T 2ism_A 108 VRLRHLGE 115 (352)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 88888754
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.88 E-value=5 Score=40.65 Aligned_cols=106 Identities=8% Similarity=0.123 Sum_probs=57.1
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeEEEE--ecccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCeeE
Q 005473 566 DGKLLATGGHD-----KKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENPDYSL 633 (695)
Q Consensus 566 dg~~LaSgs~D-----g~V~IWDl~t~~~~~~--l~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~~~~l 633 (695)
++++++.|+.+ ..+.+||..+.+-... +........++.+ ++.+++.|+.+ ..+.+||+.+.....
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56777776643 4688899887654322 1111111222333 56677777654 458999998754311
Q ss_pred -EEEecCCCCeEEEEEecCCCeEEEEEeCC-----CcEEEEECCCCeEE
Q 005473 634 -RTFTGHSTTVMSLDFHPSKEDLLCSCDNN-----SEIRYWSINNGSCA 676 (695)
Q Consensus 634 -~~~~gh~~~V~sl~fspdg~~llaSgs~D-----g~IriWDl~tg~~v 676 (695)
..+........++.+ ++ .+++.|+.+ ..|.+||+.+.+..
T Consensus 199 ~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 111111111122222 33 477777754 56999999876543
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.83 E-value=8.4 Score=39.02 Aligned_cols=109 Identities=11% Similarity=0.120 Sum_probs=58.7
Q ss_pred CCCEEEEEeC-C-----CcEEEEECCCCeEEEEe--cccCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCCee
Q 005473 566 DGKLLATGGH-D-----KKAVLWCTESFTVKSTL--EEHTQWITDVRFSPSLSRLATSSADR-----TVRVWDTENPDYS 632 (695)
Q Consensus 566 dg~~LaSgs~-D-----g~V~IWDl~t~~~~~~l--~~H~~~V~~v~~spdg~~LaTgs~Dg-----tIrvWDl~t~~~~ 632 (695)
++++++.|+. + ..|.+||..+.+-...- ........++.+ ++.+++.|+.++ .+.+||+.+....
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 5667777775 2 46889998876533221 111111222223 567778887654 5889999876542
Q ss_pred EEEEecCCCCeEEEEEecCCCeEEEEEeCC--------------CcEEEEECCCCeEEEE
Q 005473 633 LRTFTGHSTTVMSLDFHPSKEDLLCSCDNN--------------SEIRYWSINNGSCAGV 678 (695)
Q Consensus 633 l~~~~gh~~~V~sl~fspdg~~llaSgs~D--------------g~IriWDl~tg~~v~~ 678 (695)
...-......-.+++.. ++ .+++.|+.+ ..|.+||+.+.+....
T Consensus 226 ~~~~~p~~r~~~~~~~~-~~-~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 226 PFEAFPQERSSLSLVSL-VG-TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EECCCSSCCBSCEEEEE-TT-EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ECCCCCCcccceeEEEE-CC-EEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 11100111111122222 33 466677653 2478999988866554
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.77 E-value=7 Score=39.53 Aligned_cols=107 Identities=12% Similarity=0.202 Sum_probs=58.6
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCeEEEE--ecccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCeeE
Q 005473 566 DGKLLATGGHD-----KKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENPDYSL 633 (695)
Q Consensus 566 dg~~LaSgs~D-----g~V~IWDl~t~~~~~~--l~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~~~~l 633 (695)
++++++.|+.+ ..|.+||+.+.+-... +........++.+ ++.+++.|+.+ ..|.+||+.+.....
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 66777777654 4588999887654322 1111111223333 56677777654 469999998755311
Q ss_pred -EEEecCCCCeEEEEEecCCCeEEEEEeCC-----CcEEEEECCCCeEEE
Q 005473 634 -RTFTGHSTTVMSLDFHPSKEDLLCSCDNN-----SEIRYWSINNGSCAG 677 (695)
Q Consensus 634 -~~~~gh~~~V~sl~fspdg~~llaSgs~D-----g~IriWDl~tg~~v~ 677 (695)
..+...... .+++.. ++ .+++.|+.+ ..|.+||+.+.+...
T Consensus 246 ~~~~p~~r~~-~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 246 VAPMKHRRSA-LGITVH-QG-RIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp CCCCSSCCBS-CEEEEE-TT-EEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred CCCCCCCccc-eEEEEE-CC-EEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 111111111 122222 33 477777643 468899998876543
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.61 E-value=5.7 Score=45.93 Aligned_cols=108 Identities=12% Similarity=0.158 Sum_probs=62.5
Q ss_pred CCCEEEEEeCC------CcEEEEECCCCeEEEE--ecccCCCeEEEEEcCCCCEEEEEeCCC--eEEEEECCCCCeeEEE
Q 005473 566 DGKLLATGGHD------KKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSADR--TVRVWDTENPDYSLRT 635 (695)
Q Consensus 566 dg~~LaSgs~D------g~V~IWDl~t~~~~~~--l~~H~~~V~~v~~spdg~~LaTgs~Dg--tIrvWDl~t~~~~l~~ 635 (695)
++++++.||.+ ..|.+||..+.+-... +..... -.+++...++.+++.|+.++ .+.+||+.+.......
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 67777777754 3578899887543322 111111 12233324778888887654 6999999876542111
Q ss_pred ----EecCCCCeEEEEEecCCCeEEEEEeC--C-----CcEEEEECCCCe
Q 005473 636 ----FTGHSTTVMSLDFHPSKEDLLCSCDN--N-----SEIRYWSINNGS 674 (695)
Q Consensus 636 ----~~gh~~~V~sl~fspdg~~llaSgs~--D-----g~IriWDl~tg~ 674 (695)
+........++.+..+...+++.|+. + ..|.+||+.+.+
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 11111222345556553457777775 2 458999998876
No 331
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.36 E-value=13 Score=40.80 Aligned_cols=104 Identities=12% Similarity=0.040 Sum_probs=58.8
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEECCCC---eEEEEecc---------cCCCeEEEEEcCC----CCEEEEEeC--
Q 005473 557 KVESCHFSPDGK-LLATGGHDKKAVLWCTESF---TVKSTLEE---------HTQWITDVRFSPS----LSRLATSSA-- 617 (695)
Q Consensus 557 ~V~~v~fspdg~-~LaSgs~Dg~V~IWDl~t~---~~~~~l~~---------H~~~V~~v~~spd----g~~LaTgs~-- 617 (695)
.-..|+|.|||. .|+++...|.|++++.... ..+..+.. .......|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 357899999996 4556677899999975432 12222211 1356789999996 333333221
Q ss_pred C----------CeEEEEECCCC---------CeeEEEEe--cCCCCeEEEEEecCCCeEEEEEe
Q 005473 618 D----------RTVRVWDTENP---------DYSLRTFT--GHSTTVMSLDFHPSKEDLLCSCD 660 (695)
Q Consensus 618 D----------gtIrvWDl~t~---------~~~l~~~~--gh~~~V~sl~fspdg~~llaSgs 660 (695)
+ ..|.-|.+... ...+..+. ........|.|.|||..+|.+|+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444555321 11222222 11234688999999975554443
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.76 E-value=18 Score=44.52 Aligned_cols=101 Identities=14% Similarity=0.048 Sum_probs=65.0
Q ss_pred CcEEEEECCCCeEEEEeccc-CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCCCCeEEEEEecCC---
Q 005473 577 KKAVLWCTESFTVKSTLEEH-TQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSK--- 652 (695)
Q Consensus 577 g~V~IWDl~t~~~~~~l~~H-~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~~~V~sl~fspdg--- 652 (695)
..|++.+......+..+... ...|.+.+.+. ..++.++ ++.+.+++++.+......-......|.|+++.|..
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~ 568 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSN 568 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSST
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCc
Confidence 34777777655556566533 33576666653 4666665 67888888876432221222235689999998643
Q ss_pred --CeEEEEEeC-CCcEEEEECCCCeEEEEEe
Q 005473 653 --EDLLCSCDN-NSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 653 --~~llaSgs~-Dg~IriWDl~tg~~v~~~~ 680 (695)
..+++.|.. |++|+|+++.+-+.+....
T Consensus 569 ~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 569 GLSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp TCCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred ccccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 247777775 9999999998776665443
No 333
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=86.60 E-value=2.1 Score=42.61 Aligned_cols=99 Identities=12% Similarity=-0.012 Sum_probs=57.8
Q ss_pred CCEEEEEeCCCcEEEEECCCCe------EEEEeccc--CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee----EE
Q 005473 567 GKLLATGGHDKKAVLWCTESFT------VKSTLEEH--TQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS----LR 634 (695)
Q Consensus 567 g~~LaSgs~Dg~V~IWDl~t~~------~~~~l~~H--~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~----l~ 634 (695)
...|++...| +|++=.+..+. ....+ ++ =..+.+++|+|++.+.++ .+|.++-.+..+.... ..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 3456666667 66665554433 11222 22 246789999998887666 6777777776442210 01
Q ss_pred EEecCCC--CeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 635 TFTGHST--TVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 635 ~~~gh~~--~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
+..+..+ .-.++.|+|+|. |+++ .||.|+-|+-.+
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCC
T ss_pred cEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCc
Confidence 1111111 137899999987 4444 579998888643
No 334
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=86.07 E-value=0.32 Score=41.00 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=31.1
Q ss_pred CCcchHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCCC
Q 005473 3 QNNWEADKMLDVYIYDYLLKRKLHASAKAFQTEGKVSTD 41 (695)
Q Consensus 3 ~~~~~~~~~L~~yIydyl~k~~~~~tA~af~~e~~~~~~ 41 (695)
.+....+ -||--|++||..+|+.+++.+|.+|.+++.+
T Consensus 5 Lt~rQ~e-EL~kaI~~YL~~~~~~~~~~alr~e~~~~~~ 42 (88)
T 1uuj_A 5 LSQRQRD-ELNRAIADYLRSNGYEEAYSVFKKEAELDMN 42 (88)
T ss_dssp CCHHHHH-HHHHHHHHHHHHTTCHHHHHHHHHHTTCCCC
T ss_pred CCHHHHH-HHHHHHHHHHHhcCcHHHHHHHHHHhcCCCC
Confidence 3334333 5799999999999999999999999988754
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=85.86 E-value=4.8 Score=41.54 Aligned_cols=110 Identities=6% Similarity=-0.023 Sum_probs=67.0
Q ss_pred EEEEcCCCCEEEEEeCC--------------CcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEe----CCCeE
Q 005473 560 SCHFSPDGKLLATGGHD--------------KKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSS----ADRTV 621 (695)
Q Consensus 560 ~v~fspdg~~LaSgs~D--------------g~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs----~DgtI 621 (695)
+--|+++|.+|+-+... ..|+..+++..+....... . +..|++++..|+-.. .+..|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---P--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---C--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---C--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34457788887766543 3677778776654332221 1 235677888887665 23456
Q ss_pred EEEECCCCCeeEEEEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe
Q 005473 622 RVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 622 rvWDl~t~~~~l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~ 680 (695)
+.-+++... ...+..+.. ..|+++++.|+.+...+..|++.++..+.....+.
T Consensus 132 y~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~ 184 (302)
T 3s25_A 132 YRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD 184 (302)
T ss_dssp EEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC
T ss_pred EEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC
Confidence 666666433 344444432 45677888888776657889999987765444443
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.30 E-value=6.5 Score=39.95 Aligned_cols=109 Identities=12% Similarity=0.192 Sum_probs=58.7
Q ss_pred CCCEEEEEeCC------CcEEEEECCCCeEEEEe--cccCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCee
Q 005473 566 DGKLLATGGHD------KKAVLWCTESFTVKSTL--EEHTQWITDVRFSPSLSRLATSSAD-----RTVRVWDTENPDYS 632 (695)
Q Consensus 566 dg~~LaSgs~D------g~V~IWDl~t~~~~~~l--~~H~~~V~~v~~spdg~~LaTgs~D-----gtIrvWDl~t~~~~ 632 (695)
++++++.|+.+ ..|.+||..+.+-...- ........++.+ ++.+++.|+.+ ..|.+||+.+....
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 66666666642 35899999876543321 111111222222 46677777653 35788999876542
Q ss_pred E-EEEecCCCCeEEEEEecCCCeEEEEEeCC--------------CcEEEEECCCCeEEEEE
Q 005473 633 L-RTFTGHSTTVMSLDFHPSKEDLLCSCDNN--------------SEIRYWSINNGSCAGVF 679 (695)
Q Consensus 633 l-~~~~gh~~~V~sl~fspdg~~llaSgs~D--------------g~IriWDl~tg~~v~~~ 679 (695)
. ..+....... +++.. ++ .+++.|+.+ ..|.+||+.+.+.....
T Consensus 236 ~~~~~p~~r~~~-~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 294 (318)
T 2woz_A 236 VMTEFPQERSSI-SLVSL-AG-SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGML 294 (318)
T ss_dssp ECCCCSSCCBSC-EEEEE-TT-EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEE
T ss_pred ECCCCCCcccce-EEEEE-CC-EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhhc
Confidence 1 1111111111 22222 33 466677653 46889999988766553
No 337
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=84.89 E-value=0.6 Score=39.55 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHhhcCCCCCC
Q 005473 11 MLDVYIYDYLLKRKLHASAKAFQTEGKVSTDP 42 (695)
Q Consensus 11 ~L~~yIydyl~k~~~~~tA~af~~e~~~~~~~ 42 (695)
-+|--||-||..+|+..+|-+|.+|++|...+
T Consensus 7 evN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~ 38 (90)
T 2xtc_A 7 EVNFLVYRYLQESGFSHSAFTFGIESHISQSN 38 (90)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhcCCccc
Confidence 48889999999999999999999999886543
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=84.14 E-value=12 Score=37.80 Aligned_cols=106 Identities=11% Similarity=0.153 Sum_probs=55.9
Q ss_pred CCCEEEEEeCC--------CcEEEEECCCCeEEEE--ecccCCCeEEEEEcCCCCEEEEEeC-C-----CeEEEEECCCC
Q 005473 566 DGKLLATGGHD--------KKAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSA-D-----RTVRVWDTENP 629 (695)
Q Consensus 566 dg~~LaSgs~D--------g~V~IWDl~t~~~~~~--l~~H~~~V~~v~~spdg~~LaTgs~-D-----gtIrvWDl~t~ 629 (695)
++++++.|+.+ ..+.+||..+.+-... +........++. -++.+++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56666666632 4588999987653321 111111112222 34567777765 2 36899999875
Q ss_pred CeeE-EEEecCCCCeEEEEEecCCCeEEEEEeCCC-----cEEEEECCCCeEE
Q 005473 630 DYSL-RTFTGHSTTVMSLDFHPSKEDLLCSCDNNS-----EIRYWSINNGSCA 676 (695)
Q Consensus 630 ~~~l-~~~~gh~~~V~sl~fspdg~~llaSgs~Dg-----~IriWDl~tg~~v 676 (695)
.... ..+.. ...-.+++.. ++ .+++.|+.++ .|.+||+.+.+..
T Consensus 176 ~W~~~~~~p~-~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 176 EWKELAPMQT-ARSLFGATVH-DG-RIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp EEEECCCCSS-CCBSCEEEEE-TT-EEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred eEEECCCCCC-chhceEEEEE-CC-EEEEEeccCCCCccceEEEEECCCCeEE
Confidence 4311 11111 1111122222 44 4666777554 5889999876543
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.72 E-value=16 Score=42.14 Aligned_cols=111 Identities=13% Similarity=0.181 Sum_probs=62.9
Q ss_pred CCCCEEEEEeCCC--cEEEEECCCCeEEEEec-----ccCCCeEEEEEcCC-CCEEEEEeC--C-----CeEEEEECCCC
Q 005473 565 PDGKLLATGGHDK--KAVLWCTESFTVKSTLE-----EHTQWITDVRFSPS-LSRLATSSA--D-----RTVRVWDTENP 629 (695)
Q Consensus 565 pdg~~LaSgs~Dg--~V~IWDl~t~~~~~~l~-----~H~~~V~~v~~spd-g~~LaTgs~--D-----gtIrvWDl~t~ 629 (695)
.++++++.||.++ .|.+||..+..-...-. .......++.+..+ +.+++.|+. + ..|.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3788888888654 68999998765432211 11122233555554 567777765 2 35899999876
Q ss_pred C------ee-EEEEecCCCCeEEEEEecCCCeEEEEEeC--------CCcEEEEECCCCeEE
Q 005473 630 D------YS-LRTFTGHSTTVMSLDFHPSKEDLLCSCDN--------NSEIRYWSINNGSCA 676 (695)
Q Consensus 630 ~------~~-l~~~~gh~~~V~sl~fspdg~~llaSgs~--------Dg~IriWDl~tg~~v 676 (695)
. .. +.........-.+++...++. +++.|+. ...|.+||+.+.+..
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 6 21 111111111112233333344 6667764 346999999887654
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.07 E-value=5.2 Score=45.10 Aligned_cols=94 Identities=7% Similarity=0.010 Sum_probs=63.8
Q ss_pred cEEEEECCC----CeEEEEecccCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECCC-----------CCeeEEEEecCCC
Q 005473 578 KAVLWCTES----FTVKSTLEEHTQWITDVRFSPSLSRLATSSA-DRTVRVWDTEN-----------PDYSLRTFTGHST 641 (695)
Q Consensus 578 ~V~IWDl~t----~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~-DgtIrvWDl~t-----------~~~~l~~~~gh~~ 641 (695)
.|.|.|.+. +..+..+..-......|.++|||++++.++. +.+|.|+|++. .+.++..-..-.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 477888765 2222222223445568899999999877764 78999999873 1112222222334
Q ss_pred CeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 642 TVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 642 ~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
.....+|.++| ..+.+.--|..|..|++..
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 57889999998 5676777999999999964
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.78 E-value=17 Score=43.67 Aligned_cols=38 Identities=13% Similarity=0.343 Sum_probs=30.5
Q ss_pred CeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe
Q 005473 642 TVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 642 ~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~ 680 (695)
.|.+++..++.. ++++-+.|+++|||++.+++|+.+..
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeEeeec
Confidence 356677777766 56688899999999999999998764
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=80.24 E-value=39 Score=34.51 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=28.1
Q ss_pred CCCEEEEEeC-C---------CcEEEEECCCCeEEEEec---ccCCCeEEEEEcCCCCEEEEEeCC
Q 005473 566 DGKLLATGGH-D---------KKAVLWCTESFTVKSTLE---EHTQWITDVRFSPSLSRLATSSAD 618 (695)
Q Consensus 566 dg~~LaSgs~-D---------g~V~IWDl~t~~~~~~l~---~H~~~V~~v~~spdg~~LaTgs~D 618 (695)
++++++.|+. + ..|.+||..+.+-...-. .......++. .++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 5666666665 2 468899998765432211 1111122222 456777888764
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=79.94 E-value=12 Score=38.45 Aligned_cols=58 Identities=9% Similarity=0.016 Sum_probs=28.3
Q ss_pred eEEEEECCCCCee-EEEEecCCCCeEEEEEecCCCeEEEEEeCCC------cEEEEECCCCeEEEEEe
Q 005473 620 TVRVWDTENPDYS-LRTFTGHSTTVMSLDFHPSKEDLLCSCDNNS------EIRYWSINNGSCAGVFK 680 (695)
Q Consensus 620 tIrvWDl~t~~~~-l~~~~gh~~~V~sl~fspdg~~llaSgs~Dg------~IriWDl~tg~~v~~~~ 680 (695)
.+.+||+.+.... +..+........++. .++. +++.|+.++ .|.++++++++.+....
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNS-LLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE--ETTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE--eCCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 5789999876542 222221111222222 3444 666777542 46667888887765544
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.62 E-value=25 Score=42.11 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=30.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEE
Q 005473 599 WITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTF 636 (695)
Q Consensus 599 ~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~ 636 (695)
.|.+++..++..+++|-+.|+++|+|++.++. |+.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~-~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ-CVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE-EEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC-eEeee
Confidence 46778888888899999999999999999865 45553
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.92 E-value=12 Score=45.84 Aligned_cols=37 Identities=11% Similarity=0.330 Sum_probs=29.4
Q ss_pred eEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe
Q 005473 643 VMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 643 V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~ 680 (695)
+.+++..++.. ++++-+.|+++||||+.+++|+.+..
T Consensus 240 ~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTT-EEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCcc-EEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556666666 56688899999999999999998865
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=78.15 E-value=3.9 Score=43.13 Aligned_cols=116 Identities=9% Similarity=0.015 Sum_probs=65.6
Q ss_pred CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEC
Q 005473 506 DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPASTSKVESCHFSPDGKLLATG-GHDKKAVLWCT 584 (695)
Q Consensus 506 ~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H~~~V~~v~fspdg~~LaSg-s~Dg~V~IWDl 584 (695)
+.++..++.|+.|..++..++. ..|..... ...+.....+... ..++..++.. +.||.|..+|.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~-------~~W~~~~~-~~~p~~~~~~~~~-------~~~~~~~vv~p~~dG~l~a~~~ 74 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGH-------IIWSIEPE-NFQPLIEIQEPSR-------LETYETLIIEPFGDGNIYYFNA 74 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTE-------EEEEECGG-GSCCSEECCCSCT-------TTSSEEEEECCSTTTEEEEEET
T ss_pred CCEEEEEeCCCeEEEEECCCCc-------EEEEecCC-ccCCcEEecCCcc-------ccCCcEEEEEECCCCEEEEEEC
Confidence 4678899999999999765542 22322211 0011111111111 0133333333 57999999999
Q ss_pred CCCeEEEEecc----cCCCeEE---EEE-c----CCCCEEEEEeCCCeEEEEECCCCCeeEEEEe
Q 005473 585 ESFTVKSTLEE----HTQWITD---VRF-S----PSLSRLATSSADRTVRVWDTENPDYSLRTFT 637 (695)
Q Consensus 585 ~t~~~~~~l~~----H~~~V~~---v~~-s----pdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~ 637 (695)
.++.....+.. ...++.. ..+ . ..+..+++|+.++++...|+++++. +..+.
T Consensus 75 ~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~-~W~~~ 138 (339)
T 2be1_A 75 HQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI-ISAFG 138 (339)
T ss_dssp TTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE-EEEES
T ss_pred CCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE-EEEEe
Confidence 88865544422 1222221 000 0 1456889999999999999999885 66654
No 347
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=78.05 E-value=32 Score=42.19 Aligned_cols=111 Identities=10% Similarity=0.098 Sum_probs=68.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cccCCCeEEEEEcCC------CCEEEEEeC-CCeEEEEECCC
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL-EEHTQWITDVRFSPS------LSRLATSSA-DRTVRVWDTEN 628 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l-~~H~~~V~~v~~spd------g~~LaTgs~-DgtIrvWDl~t 628 (695)
.|.+++.+ +..++.+. ++.+.++.++.+...... ..-...|.|+++.|. +.+++.|.. |++|+|+++.+
T Consensus 515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 46666654 34666665 677888877655432211 223568999999863 368999997 99999999986
Q ss_pred CCeeEEEEe-cCCCCeEEEEEec-CCCeEEEEEeCCCcEEEEECC
Q 005473 629 PDYSLRTFT-GHSTTVMSLDFHP-SKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 629 ~~~~l~~~~-gh~~~V~sl~fsp-dg~~llaSgs~Dg~IriWDl~ 671 (695)
... +.... +-.....++.+.. .+..++..|-.||.+..+.++
T Consensus 592 l~~-~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 592 FEL-LHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp CCE-EEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCe-EEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 443 32221 1122445554432 234566688889988666554
No 348
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=77.92 E-value=49 Score=33.16 Aligned_cols=109 Identities=9% Similarity=0.061 Sum_probs=56.1
Q ss_pred EEcCCCCEEEEEeC----CC-------cEEEEECCCCeEEEE--ecccCCCeEEEEEcCCCCEEEEEeCC-------CeE
Q 005473 562 HFSPDGKLLATGGH----DK-------KAVLWCTESFTVKST--LEEHTQWITDVRFSPSLSRLATSSAD-------RTV 621 (695)
Q Consensus 562 ~fspdg~~LaSgs~----Dg-------~V~IWDl~t~~~~~~--l~~H~~~V~~v~~spdg~~LaTgs~D-------gtI 621 (695)
....++++++.|+. ++ .+.+||..+.+-... +.........+.+ ++.+++.|+.+ ..+
T Consensus 52 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 52 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEE
T ss_pred EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceE
Confidence 33457777777773 12 177888877654322 1111111122222 56677777754 248
Q ss_pred EEEECCCCCeeEEEEecCCCC--eEEEEEecCCCeEEEEEeC------CCcEEEEECCCCeEE
Q 005473 622 RVWDTENPDYSLRTFTGHSTT--VMSLDFHPSKEDLLCSCDN------NSEIRYWSINNGSCA 676 (695)
Q Consensus 622 rvWDl~t~~~~l~~~~gh~~~--V~sl~fspdg~~llaSgs~------Dg~IriWDl~tg~~v 676 (695)
.+||+.+.... .+...... -.+++. .++. +++.|+. -..|.+||+.+.+..
T Consensus 130 ~~yd~~~~~W~--~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 130 LCYDPVAAKWS--EVKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp EEEETTTTEEE--EECCCSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred EEEeCCCCCEe--ECCCCCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 88999875531 11111111 011222 3444 6666663 235999999877544
No 349
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=77.21 E-value=11 Score=39.48 Aligned_cols=74 Identities=12% Similarity=0.267 Sum_probs=45.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee--EE----EEecCCCCeEEEEEecC---CCeEEEEEeC-------
Q 005473 598 QWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS--LR----TFTGHSTTVMSLDFHPS---KEDLLCSCDN------- 661 (695)
Q Consensus 598 ~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~--l~----~~~gh~~~V~sl~fspd---g~~llaSgs~------- 661 (695)
.....|+|.|+++.|+.+..+|.|++++... ... +. .+....+....|+|+|+ +..++++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 3467999999998344445679999998542 211 11 11112345789999996 5556655443
Q ss_pred CCcEEEEECCC
Q 005473 662 NSEIRYWSINN 672 (695)
Q Consensus 662 Dg~IriWDl~t 672 (695)
...|..|++..
T Consensus 97 ~~~v~r~~~~~ 107 (353)
T 2g8s_A 97 GTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEECT
T ss_pred eeEEEEEEECC
Confidence 23577777653
No 350
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=75.61 E-value=78 Score=36.21 Aligned_cols=112 Identities=8% Similarity=0.088 Sum_probs=69.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe-ccc----CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCC
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL-EEH----TQWITDVRFSPSLSRLATSSADRTVRVWDTENPD 630 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l-~~H----~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~ 630 (695)
..|.++....+|++.+ |+.+ -|..+|..+.+..... ... ...|.++....++..|..|.. +.|..+|..+..
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4588888888888655 4444 4778888776543221 111 234888888877776655653 468889987654
Q ss_pred eeEEEEe-cCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeE
Q 005473 631 YSLRTFT-GHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSC 675 (695)
Q Consensus 631 ~~l~~~~-gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~ 675 (695)
. ..+. -....|.++....+|. ++ .|+. +-|.++|..+++.
T Consensus 223 ~--~~~~~l~~~~i~~i~~d~~g~-lW-igT~-~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 223 I--KQTEAFHNNSIKSLALDGNGD-LL-AGTD-NGLYVYHNDTTPL 263 (758)
T ss_dssp E--EEEEEEEEEEEEEEEECTTCC-EE-EEET-TEEEEECCTTSCC
T ss_pred E--EeccCCCCCeEEEEEEcCCCC-EE-EEeC-CceeEEecCCCcE
Confidence 3 2111 1123588888887877 44 3443 4588888776543
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=75.22 E-value=60 Score=33.11 Aligned_cols=102 Identities=6% Similarity=-0.002 Sum_probs=61.0
Q ss_pred EEEcCCCCEEEEEeC-CCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCC--CeEEEEECCCCCeeEEEEe
Q 005473 561 CHFSPDGKLLATGGH-DKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSAD--RTVRVWDTENPDYSLRTFT 637 (695)
Q Consensus 561 v~fspdg~~LaSgs~-Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~D--gtIrvWDl~t~~~~l~~~~ 637 (695)
..|+++++.|+-.+. ...|.+.++..+.....+.+ ... ..++|++++|+-...+ ..|..-+++... ...+.
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~--~~~Lt 223 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN--PVVLT 223 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC--CEECS
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC--eEEEe
Confidence 345678887776654 57788888887765544442 222 3356888888766543 356666666543 23343
Q ss_pred cCCCCeEEEEEecCCCeEEEEEe-CCCcEEEEECCC
Q 005473 638 GHSTTVMSLDFHPSKEDLLCSCD-NNSEIRYWSINN 672 (695)
Q Consensus 638 gh~~~V~sl~fspdg~~llaSgs-~Dg~IriWDl~t 672 (695)
. ..+ ..|+|++..|+.+.. ..+.|..-+++.
T Consensus 224 ~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 224 E--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp C--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred C--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 2 233 347888887765533 345677777653
No 352
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=69.96 E-value=23 Score=44.35 Aligned_cols=123 Identities=10% Similarity=0.230 Sum_probs=73.1
Q ss_pred CCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCeEEEEecccCCCeEEEEEc--CCC-CEEEEEeC---CCeEE
Q 005473 556 SKVESCHFSPDGKLLATGG-------HDKKAVLWCTESFTVKSTLEEHTQWITDVRFS--PSL-SRLATSSA---DRTVR 622 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs-------~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~s--pdg-~~LaTgs~---DgtIr 622 (695)
..|..-..+++.++++..| ..|.+-+|.++. +....++||.+....+.+. +.. .++..+.. .+.++
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 3466667778888766433 347888998865 3344667886655555443 112 23333322 36899
Q ss_pred EEECCCC-----Ce---eEEEEecC---CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEe
Q 005473 623 VWDTENP-----DY---SLRTFTGH---STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 623 vWDl~t~-----~~---~l~~~~gh---~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~ 680 (695)
|-++... .. .+..+... .+...++..++.-. +++.-+.-|.|++||+.+|.|+..-+
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccchhhhhcc
Confidence 9998653 11 11111111 23345566676655 55577778999999999998875433
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=68.04 E-value=8.2 Score=48.20 Aligned_cols=118 Identities=14% Similarity=0.199 Sum_probs=77.9
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEecCC
Q 005473 561 CHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHS 640 (695)
Q Consensus 561 v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~gh~ 640 (695)
...+|..+.||.-. ..++.|||+++...++.+.-. ..|.-=+|-.+ +.|+..+ +..|+.|++.....+++.|..|.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 44566666666654 688999999887776666543 34555566544 3443332 46799999976556677776663
Q ss_pred ----CCeEEEEEecCCCeEEEEEe------CCCcEEEEECCCCeEEEEEecCC
Q 005473 641 ----TTVMSLDFHPSKEDLLCSCD------NNSEIRYWSINNGSCAGVFKNFF 683 (695)
Q Consensus 641 ----~~V~sl~fspdg~~llaSgs------~Dg~IriWDl~tg~~v~~~~~h~ 683 (695)
..|..-..+++.+|++++|- -.|.+.+|.+..+ .-..+.||.
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha 198 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHA 198 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhH
Confidence 45667777889998887764 4588999998643 333334443
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=66.73 E-value=74 Score=33.09 Aligned_cols=68 Identities=4% Similarity=-0.073 Sum_probs=35.3
Q ss_pred CCeEEEEEcC--CCCEEEEEeCCC----cEEEEECCCCeEEEEecc--------------cCCCeEEEEEcC-C-CCEEE
Q 005473 556 SKVESCHFSP--DGKLLATGGHDK----KAVLWCTESFTVKSTLEE--------------HTQWITDVRFSP-S-LSRLA 613 (695)
Q Consensus 556 ~~V~~v~fsp--dg~~LaSgs~Dg----~V~IWDl~t~~~~~~l~~--------------H~~~V~~v~~sp-d-g~~La 613 (695)
..|.+|++.| ++.+++. +..+ .|... .+.++.-..+.. +...|.+|++.| + ...|+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g-~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMA-ARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEEE-EEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CceEEEEECCCCCCeEEEE-ecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 4599999998 5555544 4344 34333 222322222211 112577899987 2 45566
Q ss_pred EEeCCCeEEEEE
Q 005473 614 TSSADRTVRVWD 625 (695)
Q Consensus 614 Tgs~DgtIrvWD 625 (695)
.+...+.|...+
T Consensus 133 ~g~~~ggl~~S~ 144 (394)
T 3b7f_A 133 AGTSPQGLFRST 144 (394)
T ss_dssp EEEETTEEEEES
T ss_pred EEecCCcEEEEc
Confidence 655566555543
No 355
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=65.87 E-value=1.6e+02 Score=33.45 Aligned_cols=110 Identities=10% Similarity=-0.010 Sum_probs=65.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEec----ccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCee
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE----EHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYS 632 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~----~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~ 632 (695)
.|.++.. .+| .|..|+.+ -|..||..+.+...... .....|.++....++.+.+ |+. +.|..||..+...
T Consensus 104 ~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~- 177 (758)
T 3ott_A 104 DVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKF- 177 (758)
T ss_dssp CEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEE-
T ss_pred eEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCce-
Confidence 4776654 355 45556655 58888987665432211 1135688888887776655 444 4578888876443
Q ss_pred EEEEecC------CCCeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeE
Q 005473 633 LRTFTGH------STTVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSC 675 (695)
Q Consensus 633 l~~~~gh------~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~ 675 (695)
..+... ...|.++....++..+++ |+. +-|..+|..+++.
T Consensus 178 -~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-gt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 178 -EGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-GTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp -EEECCCCCTTCSSCCEEEEEEETTTTEEEE-EEE-EEEEEEETTTTEE
T ss_pred -EEecCCCccccccceeEEEEEECCCCEEEE-EEC-CCCeEEcCCCCeE
Confidence 222111 124888888877664443 333 4588899877654
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=65.12 E-value=58 Score=36.74 Aligned_cols=124 Identities=16% Similarity=0.159 Sum_probs=74.2
Q ss_pred eEEEEEcCCCCEEEEEe-CCCcEEEEECCCC------eE-------EEEecccCCCeEEEEEcCCCCEEEEEe-CCCeEE
Q 005473 558 VESCHFSPDGKLLATGG-HDKKAVLWCTESF------TV-------KSTLEEHTQWITDVRFSPSLSRLATSS-ADRTVR 622 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs-~Dg~V~IWDl~t~------~~-------~~~l~~H~~~V~~v~~spdg~~LaTgs-~DgtIr 622 (695)
...|.++|||++++.++ .+.+|.|+|++.. +. +...+ -.-.....+|.++| ..+|.- -|..|-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G-~aYTtlfidSqvv 402 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRG-NAYTTLFIDSQVV 402 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSS-EEEEEETTTTEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCC-ceEeeeeecceEE
Confidence 45789999999887766 4889999998741 11 22222 24456788999998 555544 699999
Q ss_pred EEECCCC---------CeeEEEEecCCCCeEEEEE------ecCCCeEEEEE--eCCCc----------EEEEECCCC--
Q 005473 623 VWDTENP---------DYSLRTFTGHSTTVMSLDF------HPSKEDLLCSC--DNNSE----------IRYWSINNG-- 673 (695)
Q Consensus 623 vWDl~t~---------~~~l~~~~gh~~~V~sl~f------spdg~~llaSg--s~Dg~----------IriWDl~tg-- 673 (695)
-|++... ...+..+..|-. +-.+.- .++|++|++.+ +.|.. -.++|+...
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGdkM 481 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGDEM 481 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSSSC
T ss_pred EEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCCce
Confidence 9998642 123444544432 222222 56788665333 23433 367777532
Q ss_pred eEEEEEecCCC
Q 005473 674 SCAGVFKNFFE 684 (695)
Q Consensus 674 ~~v~~~~~h~~ 684 (695)
+.+........
T Consensus 482 ~lv~D~P~~~E 492 (638)
T 3sbq_A 482 KLVHDGPTFAE 492 (638)
T ss_dssp EEEEEEEESSC
T ss_pred EEEecCCCCCC
Confidence 34444443333
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=59.59 E-value=1.3e+02 Score=31.03 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=68.9
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEecc--cC---CCeEEEEEcC-CCCEEEEEeC-----------C
Q 005473 557 KVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLEE--HT---QWITDVRFSP-SLSRLATSSA-----------D 618 (695)
Q Consensus 557 ~V~~v~fspd-g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~--H~---~~V~~v~~sp-dg~~LaTgs~-----------D 618 (695)
.|.+|.+.++ ...|+.+...+ |...+- .++....+.. .. ..+.+|.++| +...|+.+.. +
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~ 310 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG 310 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC
Confidence 4889999885 35666666554 444432 2332222221 11 3467888887 3344444432 3
Q ss_pred CeEEEEECCCCCeeEEEEe-cCCC-------CeEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEecCCCcEEEEE
Q 005473 619 RTVRVWDTENPDYSLRTFT-GHST-------TVMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKNFFESFVSVR 690 (695)
Q Consensus 619 gtIrvWDl~t~~~~l~~~~-gh~~-------~V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~h~~~VtsVa 690 (695)
+...||....+...-..+. +... ....++++|.....|+.++.++.|.+- .+.|+.-..+..+-..|.+|+
T Consensus 311 ~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~ 389 (394)
T 3b7f_A 311 GKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQ 389 (394)
T ss_dssp SSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEE
T ss_pred CceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEE
Confidence 3345665554322122221 1111 113578887643334456556655433 234554445555666789999
Q ss_pred EeCC
Q 005473 691 VVQP 694 (695)
Q Consensus 691 f~sP 694 (695)
|..|
T Consensus 390 ~~~~ 393 (394)
T 3b7f_A 390 SARP 393 (394)
T ss_dssp EECC
T ss_pred EecC
Confidence 8545
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=58.08 E-value=1.2e+02 Score=32.87 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=54.8
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCC--eeEEEEe---------cCCCCeEEEEEecC---CCeEEEEEeC-
Q 005473 598 QWITDVRFSPSLS-RLATSSADRTVRVWDTENPD--YSLRTFT---------GHSTTVMSLDFHPS---KEDLLCSCDN- 661 (695)
Q Consensus 598 ~~V~~v~~spdg~-~LaTgs~DgtIrvWDl~t~~--~~l~~~~---------gh~~~V~sl~fspd---g~~llaSgs~- 661 (695)
...+.|+|.|++. .|+++...|.|++++..... ..+..+. +.......|+|+|+ ...|+++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457999999985 45555678999999764321 1122221 11356789999996 2335544332
Q ss_pred -C----------CcEEEEECCC----------CeEEEEEe--cCCCcEEEEEEeCCC
Q 005473 662 -N----------SEIRYWSINN----------GSCAGVFK--NFFESFVSVRVVQPR 695 (695)
Q Consensus 662 -D----------g~IriWDl~t----------g~~v~~~~--~h~~~VtsVaf~sPd 695 (695)
+ ..|.-|.+.. .+.|..+. ........|+| .||
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~f-gpD 149 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLF-GPD 149 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEE-CTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeE-CCC
Confidence 1 1444466542 23344443 11233578999 886
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.15 E-value=2.6e+02 Score=32.32 Aligned_cols=36 Identities=14% Similarity=0.306 Sum_probs=27.8
Q ss_pred eEEEEEecCCCeEEEEEeCCCcEEEEECCCCeEEEEEec
Q 005473 643 VMSLDFHPSKEDLLCSCDNNSEIRYWSINNGSCAGVFKN 681 (695)
Q Consensus 643 V~sl~fspdg~~llaSgs~Dg~IriWDl~tg~~v~~~~~ 681 (695)
|.++.+. .. ++++-+.|+++|+||+++++|+.+..-
T Consensus 224 Is~~~~~--~~-fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLFH--ER-YLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEET--TT-EEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEeccC--Cc-EEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 5554443 34 666888999999999999999988764
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=47.59 E-value=2.5e+02 Score=28.93 Aligned_cols=159 Identities=12% Similarity=0.049 Sum_probs=0.0
Q ss_pred EEEEeeCCCcEEEEeCCCCCCCCCcccccccc---CCCceeeeEEEecCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEE
Q 005473 508 FVDDGSLDDNVESFLSPDDADPRDRVGRSAEV---GKGFTFTEFQLIPASTSKVESCHFSP--DGKLLATGGHDKKAVLW 582 (695)
Q Consensus 508 ~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~---~~~~~~~~v~~l~~H~~~V~~v~fsp--dg~~LaSgs~Dg~V~IW 582 (695)
++..++....+.+| ...+..-......+... ..+.....+-.+.....-|..+.+.. +..+++.++.+|.|+..
T Consensus 46 ~~~~~~t~d~ll~f-T~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~ 124 (327)
T 3uc1_A 46 HFFVCSTHDLILFF-TTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKS 124 (327)
T ss_dssp EEEEEETTSEEEEE-ETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEE
T ss_pred EEEEeCCCCEEEEE-eCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEe
Q ss_pred ECCC-------CeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC----------CCCeeEEEEecCCCCeEE
Q 005473 583 CTES-------FTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTE----------NPDYSLRTFTGHSTTVMS 645 (695)
Q Consensus 583 Dl~t-------~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~----------t~~~~l~~~~gh~~~V~s 645 (695)
.+.. +.....+.. .+.+..+........|+..+..|.+..+.+. ......-.+. ....|.+
T Consensus 125 ~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~ 202 (327)
T 3uc1_A 125 KLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLS 202 (327)
T ss_dssp EGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEE
T ss_pred EHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEE
Q ss_pred EEEecCCCeEEEEEeCCCcEEEEEC
Q 005473 646 LDFHPSKEDLLCSCDNNSEIRYWSI 670 (695)
Q Consensus 646 l~fspdg~~llaSgs~Dg~IriWDl 670 (695)
+...+++..++ ..+..|.++.-.+
T Consensus 203 ~~~~~~~~~ll-~~T~~G~~Krt~l 226 (327)
T 3uc1_A 203 LNVVREGTYLL-VATSGGYAKRTAI 226 (327)
T ss_dssp EEECCTTCEEE-EEETTSEEEEEEG
T ss_pred EEEECCCCEEE-EEeCCCcEEEEEH
No 361
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=47.38 E-value=2.8e+02 Score=31.18 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=28.1
Q ss_pred CCCCeEEEEEcCCCC-EEEEEeCCCc----------------------------EEEEECCCCeEEEEe
Q 005473 554 STSKVESCHFSPDGK-LLATGGHDKK----------------------------AVLWCTESFTVKSTL 593 (695)
Q Consensus 554 H~~~V~~v~fspdg~-~LaSgs~Dg~----------------------------V~IWDl~t~~~~~~l 593 (695)
|-..+..+.|.-||+ -|+....||+ |.|+|-.+++.+.++
T Consensus 177 ~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~ 245 (591)
T 2zux_A 177 HYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTA 245 (591)
T ss_dssp TSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEE
T ss_pred ccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecc
Confidence 455677777777886 5666666665 778888788777665
No 362
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=43.91 E-value=2.9e+02 Score=28.59 Aligned_cols=112 Identities=10% Similarity=0.140 Sum_probs=60.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCC-----------CeEEEEeccc-CCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTES-----------FTVKSTLEEH-TQWITDVRFSPSLSRLATSSADRTVRVW 624 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t-----------~~~~~~l~~H-~~~V~~v~~spdg~~LaTgs~DgtIrvW 624 (695)
.|..++++......+.-..||.|+.|-... ......+..- ...|..|+... .+.+.-..||.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~--~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG--AHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS--SEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc--CeEEEEeCCCeEEEe
Confidence 355566766666666667889999995421 0111122221 23577776643 455555679999999
Q ss_pred ECCCCC---------e-eEEEEec-CCCCeEEEEEecCCCeEEEEEeCCCcEEEEECC
Q 005473 625 DTENPD---------Y-SLRTFTG-HSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 625 Dl~t~~---------~-~l~~~~g-h~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~ 671 (695)
-..... . ....+.. ....|..++...... ..+.-..||.|+.|-..
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~-~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA-QTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSC-EEEEEETTTEEEEEECC
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCc-EEEEEccCCEEEEEeCC
Confidence 753211 0 0111111 123466665543223 33355678999999643
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=41.71 E-value=19 Score=44.10 Aligned_cols=37 Identities=16% Similarity=0.029 Sum_probs=32.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTL 593 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l 593 (695)
.|.+++..++..+|++-+.|+++||||+.++.++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4566777788899999999999999999999998775
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=39.40 E-value=75 Score=35.90 Aligned_cols=58 Identities=16% Similarity=0.260 Sum_probs=40.1
Q ss_pred EEEEEcCCCCEEEEEeCC------------CeEEEEECCCCCeeEEEEecC-CCCeEEEEEecCCCeEEEEE
Q 005473 601 TDVRFSPSLSRLATSSAD------------RTVRVWDTENPDYSLRTFTGH-STTVMSLDFHPSKEDLLCSC 659 (695)
Q Consensus 601 ~~v~~spdg~~LaTgs~D------------gtIrvWDl~t~~~~l~~~~gh-~~~V~sl~fspdg~~llaSg 659 (695)
=-|+|+|.|++++.-..+ ..+.+.+..+++. .+.+.++ ..+++.++|+||++.+++..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 458899999876665332 2356667666554 4445554 36799999999999888664
No 365
>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1
Probab=39.22 E-value=7.1 Score=35.67 Aligned_cols=12 Identities=33% Similarity=0.266 Sum_probs=5.7
Q ss_pred ChHHHHHHHHhh
Q 005473 24 KLHASAKAFQTE 35 (695)
Q Consensus 24 ~~~~tA~af~~e 35 (695)
-+.+..++-+.|
T Consensus 12 ~l~d~er~~l~~ 23 (150)
T 1qb3_A 12 KLTDQERARVLE 23 (150)
T ss_dssp CCCHHHHHHHGG
T ss_pred cchHHHHHHHHH
Confidence 344555554444
No 366
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=38.76 E-value=4.8e+02 Score=30.04 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=56.6
Q ss_pred CCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeEEEEeccc-------CCCeEEEEEcCC-CCEEEEEeCCCe----E
Q 005473 555 TSKVESCHFSPD-GKLLATGGHDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSPS-LSRLATSSADRT----V 621 (695)
Q Consensus 555 ~~~V~~v~fspd-g~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H-------~~~V~~v~~spd-g~~LaTgs~Dgt----I 621 (695)
.+.|.+|+++|. ...++.++..+.|...+ +.++.-..+..+ ...|.+|+++|. ...++.+..+.. .
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 357999999985 34666777677666554 333333333222 246999999984 344444432211 3
Q ss_pred EEEECCCCCeeEEEEe-cC------C--CCeEEEEEecCCCeEEEEEeCCC
Q 005473 622 RVWDTENPDYSLRTFT-GH------S--TTVMSLDFHPSKEDLLCSCDNNS 663 (695)
Q Consensus 622 rvWDl~t~~~~l~~~~-gh------~--~~V~sl~fspdg~~llaSgs~Dg 663 (695)
.||-...+...=.... .. . ..+..++++|.....++.+...+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 3443333221111111 00 1 13567888886555555665333
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=38.59 E-value=40 Score=39.08 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=29.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q 005473 557 KVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLE 594 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~ 594 (695)
.|.|+.+ +..+|++-+.|+++||||++++.++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4666555 46799999999999999999999887663
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=37.05 E-value=81 Score=35.63 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=41.6
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCeEEEEeccc-CCCeEEEEEcCCCCEEEEE
Q 005473 558 VESCHFSPDGKLLATGGHD------------KKAVLWCTESFTVKSTLEEH-TQWITDVRFSPSLSRLATS 615 (695)
Q Consensus 558 V~~v~fspdg~~LaSgs~D------------g~V~IWDl~t~~~~~~l~~H-~~~V~~v~~spdg~~LaTg 615 (695)
.=.|+|++.|+++++-..+ ..+.+.+..+++..+.+.++ ...++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3468999999977665432 23555666777777666654 4679999999998877665
No 369
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=35.81 E-value=4.7e+02 Score=29.51 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=33.0
Q ss_pred ecCCCCeEEEEEecCCCeEEE-EEeCC----CcEEEEECCCCeEEEEEecCC
Q 005473 637 TGHSTTVMSLDFHPSKEDLLC-SCDNN----SEIRYWSINNGSCAGVFKNFF 683 (695)
Q Consensus 637 ~gh~~~V~sl~fspdg~~lla-Sgs~D----g~IriWDl~tg~~v~~~~~h~ 683 (695)
.+|...+...+|.|+.+-+.+ .+.++ .-+.++|.++|+.+....++.
T Consensus 364 ~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~~~~ 415 (620)
T 2zuy_A 364 LGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVHAGT 415 (620)
T ss_dssp CCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSS
T ss_pred CCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEecCcc
Confidence 378888888889998554433 44443 256789999999998876443
No 370
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=35.63 E-value=3.4e+02 Score=26.90 Aligned_cols=121 Identities=17% Similarity=0.144 Sum_probs=56.0
Q ss_pred CceEEEEecCCCccccccCCccCCC-------CcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecC
Q 005473 481 SKSLLMFGSDGMGSLTSAPNQLTDM-------DRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPA 553 (695)
Q Consensus 481 ~~s~l~~~~dg~~~la~s~~~l~~~-------~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~ 553 (695)
+..+..|.....+.+.++....... .+.++. . |+.|..|-........ +.. .+
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg--~P~-----------~~----- 100 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTT--VPA-----------EA----- 100 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTC--CCG-----------GG-----
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCC--CCc-----------cc-----
Confidence 6677778766655555544322111 223333 4 7888888543322110 000 00
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 005473 554 STSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTEN 628 (695)
Q Consensus 554 H~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t 628 (695)
...|..|+...+-.++ -. ||.|+.|-......+-........|..|+.......+ -. ||.|+.|-...
T Consensus 101 -~~~v~~ia~G~~hs~a--l~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 101 -RSGVDAIAAGAWASYA--LK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNY 168 (282)
T ss_dssp -SSSEEEEEEETTEEEE--EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCT
T ss_pred -CCCeEEEECcCCEEEE--Ee-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCC
Confidence 1245555554332222 23 7788888543311111111123446666654332222 23 67788886543
No 371
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=35.62 E-value=33 Score=28.39 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHhhcCCCC
Q 005473 11 MLDVYIYDYLLKRKLHASAKAFQTEGKVST 40 (695)
Q Consensus 11 ~L~~yIydyl~k~~~~~tA~af~~e~~~~~ 40 (695)
+++.-|-|||-=++|.-|...|..|++++.
T Consensus 20 Li~~LVrEyLef~~l~~TlsVf~pEs~l~~ 49 (82)
T 2d68_A 20 LVASLVAEFLQFFNLDFTLAVFQPETSTLQ 49 (82)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHcCCcchHHhhhhccCCCC
Confidence 688999999999999999999999999875
No 372
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=35.11 E-value=5.2e+02 Score=28.95 Aligned_cols=57 Identities=11% Similarity=0.178 Sum_probs=36.3
Q ss_pred ecCCCCeEEEEEecCCCe-EEEEEeCC----CcEEEEECCCCeEEEEEecC--CCcEEEEEEeCC
Q 005473 637 TGHSTTVMSLDFHPSKED-LLCSCDNN----SEIRYWSINNGSCAGVFKNF--FESFVSVRVVQP 694 (695)
Q Consensus 637 ~gh~~~V~sl~fspdg~~-llaSgs~D----g~IriWDl~tg~~v~~~~~h--~~~VtsVaf~sP 694 (695)
.+|...+...+|.|+.+- -++.+.++ .-..+.|.++|+.+..+.+. .+......| .|
T Consensus 360 ~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Di-dp 423 (591)
T 2zux_A 360 LGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADI-DP 423 (591)
T ss_dssp CCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECC-CT
T ss_pred CCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEec-CC
Confidence 378888888899998531 23355443 14567899999999887643 343333334 44
No 373
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.02 E-value=3.6e+02 Score=30.83 Aligned_cols=103 Identities=12% Similarity=0.097 Sum_probs=54.1
Q ss_pred CeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeEEEEeccc-------CCCeEEEEEcC-CCCEEEEEeCC-------Ce
Q 005473 557 KVESCHFSPDG-KLLATGGHDKKAVLWCTESFTVKSTLEEH-------TQWITDVRFSP-SLSRLATSSAD-------RT 620 (695)
Q Consensus 557 ~V~~v~fspdg-~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H-------~~~V~~v~~sp-dg~~LaTgs~D-------gt 620 (695)
.|.+|+++|.. ..|+.+...+.|..++= .++.-..+..+ ...|.+|+++| +...|+.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 69999999863 45666665666666653 23332233222 24589999998 33344433321 12
Q ss_pred EEEEECCCCCeeEEE-EecCC--------CCeEEEEEecCCCeEEEEEe
Q 005473 621 VRVWDTENPDYSLRT-FTGHS--------TTVMSLDFHPSKEDLLCSCD 660 (695)
Q Consensus 621 IrvWDl~t~~~~l~~-~~gh~--------~~V~sl~fspdg~~llaSgs 660 (695)
..||-...+...-.. ..... ..+.+|+++|..+.+++.+.
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 445544333221111 11111 12467999987655555565
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=31.25 E-value=2.1e+02 Score=32.28 Aligned_cols=63 Identities=13% Similarity=0.201 Sum_probs=42.8
Q ss_pred CeEEEEEcCCCCEEEEEeC------------CCeEEEEECCCCCeeEEEEecC-CCCeEEEEEecCCCeEEEEEeCC
Q 005473 599 WITDVRFSPSLSRLATSSA------------DRTVRVWDTENPDYSLRTFTGH-STTVMSLDFHPSKEDLLCSCDNN 662 (695)
Q Consensus 599 ~V~~v~~spdg~~LaTgs~------------DgtIrvWDl~t~~~~l~~~~gh-~~~V~sl~fspdg~~llaSgs~D 662 (695)
....|.|.++|.+.++... ...|..++..+++. ...+.+. ...++.++|+||++.|+++.-.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence 3567999999888774322 12577777776654 3344433 35689999999999888776443
No 375
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.50 E-value=1.6e+02 Score=33.12 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=42.2
Q ss_pred CeEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCeEEEEeccc-CCCeEEEEEcCCCCEEEEE
Q 005473 557 KVESCHFSPDGKLLATGGHD------------KKAVLWCTESFTVKSTLEEH-TQWITDVRFSPSLSRLATS 615 (695)
Q Consensus 557 ~V~~v~fspdg~~LaSgs~D------------g~V~IWDl~t~~~~~~l~~H-~~~V~~v~~spdg~~LaTg 615 (695)
....|.|.++|.+.++.... ..|..++..+++....+.+. ...++.++|+||++.|+++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 35789999999977743321 14666677777776666543 3568999999999888765
No 376
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=28.94 E-value=4.3e+02 Score=26.08 Aligned_cols=161 Identities=17% Similarity=0.126 Sum_probs=77.3
Q ss_pred CceEEEEecCCCccccccCCcc------CCCCcEEEEeeCCCcEEEEeCCCCCCCCCccccccccCCCceeeeEEEecCC
Q 005473 481 SKSLLMFGSDGMGSLTSAPNQL------TDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVGKGFTFTEFQLIPAS 554 (695)
Q Consensus 481 ~~s~l~~~~dg~~~la~s~~~l------~~~~~~lasgS~D~~V~lw~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~H 554 (695)
+..+..|.....+.+.++.... ..-....+.-. |+.|..|-........ .. . ..
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg--~~----~-------------~~ 139 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTT--VP----A-------------EA 139 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTS--CC----G-------------GG
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCC--CC----c-------------cC
Confidence 5677788776655555543321 11112223334 8888888443321110 00 0 01
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEE
Q 005473 555 TSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLR 634 (695)
Q Consensus 555 ~~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~ 634 (695)
...|..|+...+-. ++. . ||.|+.|-......+..-..-...|..|+...... ++. .||.|+.|-...... +-
T Consensus 140 ~~~i~~i~~G~~~~-~~l-~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gq-lg 212 (282)
T 3qhy_B 140 QSGVTALDGGVYTA-LAV-K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQ-TT 212 (282)
T ss_dssp GSSEEEEEECSSEE-EEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTST-TC
T ss_pred CCCeEEEEcccCEE-EEE-E-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCC-CC
Confidence 12355554433222 222 2 68888886543211111111134677887755432 333 499999997654322 11
Q ss_pred EEecCCCCeEEEEEecCCCeEEEEEeCCCcEEEEECCC
Q 005473 635 TFTGHSTTVMSLDFHPSKEDLLCSCDNNSEIRYWSINN 672 (695)
Q Consensus 635 ~~~gh~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~t 672 (695)
.-......|..|+-.... .++.. ||.|+.|=...
T Consensus 213 ~p~~~~~~v~~i~~G~~h--~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 213 VPTEALSGVSAIASGEWY--SLALK--NGKVIAWGSSR 246 (282)
T ss_dssp CCGGGGSSCCEEEECSSC--EEEEE--TTEEEEESTTC
T ss_pred CCcccCCCceEEEcCCCE--EEEEE--CCEEEEecCCC
Confidence 001112346666655442 33233 89999997654
No 377
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=26.76 E-value=6.5e+02 Score=28.10 Aligned_cols=113 Identities=11% Similarity=0.061 Sum_probs=64.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEec-------------------ccC-----CC-eEEEEEcCCCCEEEEEeC---C
Q 005473 567 GKLLATGGHDKKAVLWCTESFTVKSTLE-------------------EHT-----QW-ITDVRFSPSLSRLATSSA---D 618 (695)
Q Consensus 567 g~~LaSgs~Dg~V~IWDl~t~~~~~~l~-------------------~H~-----~~-V~~v~~spdg~~LaTgs~---D 618 (695)
...|+.|+.||.++.+|.. ++.+..+. .|. .+ +.++.+.-.-+.++.++. .
T Consensus 85 ~~~VyvGaNDGmLHaF~a~-G~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~GG 163 (570)
T 3hx6_A 85 APRVYVGANDGMLHGFDTD-GNETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGG 163 (570)
T ss_dssp CCEEEEECSSSCEEECCSS-CCCCEEECCHHHHHHCC-------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTTSC
T ss_pred ccEEEEECCCceEEEECCC-CcEEEEECCHHHHHHHHHHhccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCCCC
Confidence 3578899999999999887 55443321 131 12 223333211123444432 3
Q ss_pred CeEEEEECCCCC--eeEEEEec-------CCCCeEEEEEecCCCeEEEEEeC------CCcEEEEECCCCeEEEEEe
Q 005473 619 RTVRVWDTENPD--YSLRTFTG-------HSTTVMSLDFHPSKEDLLCSCDN------NSEIRYWSINNGSCAGVFK 680 (695)
Q Consensus 619 gtIrvWDl~t~~--~~l~~~~g-------h~~~V~sl~fspdg~~llaSgs~------Dg~IriWDl~tg~~v~~~~ 680 (695)
+.++..|+.++. ..+..+.. +.-.--.|..-.+++++++.|+. ...|+|.|+.+|..+..+.
T Consensus 164 ~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~ 240 (570)
T 3hx6_A 164 KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLE 240 (570)
T ss_dssp SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEE
T ss_pred cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEe
Confidence 458888886643 22444431 11111223334467777766653 4589999999999999886
No 378
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=24.64 E-value=5.9e+02 Score=26.19 Aligned_cols=111 Identities=13% Similarity=0.169 Sum_probs=59.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCC----------C-eEEEEeccc-CCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 005473 556 SKVESCHFSPDGKLLATGGHDKKAVLWCTES----------F-TVKSTLEEH-TQWITDVRFSPSLSRLATSSADRTVRV 623 (695)
Q Consensus 556 ~~V~~v~fspdg~~LaSgs~Dg~V~IWDl~t----------~-~~~~~l~~H-~~~V~~v~~spdg~~LaTgs~DgtIrv 623 (695)
..|..++........+.-..||.|+.|-... . .....+..- ...|..|+... .+.+.-..||.|+.
T Consensus 211 ~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~ 288 (389)
T 3kci_A 211 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYT 288 (389)
T ss_dssp SCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEE
T ss_pred CeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEE
Confidence 3466676654334555667789999995421 0 111122221 22466776653 34444467999999
Q ss_pred EECCCCC---------ee-EEEEecC-CCCeEEEEEecCCCeEEEEEeCCCcEEEEECC
Q 005473 624 WDTENPD---------YS-LRTFTGH-STTVMSLDFHPSKEDLLCSCDNNSEIRYWSIN 671 (695)
Q Consensus 624 WDl~t~~---------~~-l~~~~gh-~~~V~sl~fspdg~~llaSgs~Dg~IriWDl~ 671 (695)
|-..... .. ...+... ...|..|+.... ..+.-..||.|+.|=..
T Consensus 289 wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~---h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL---HCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSS---EEEEEETTCCEEEEECC
T ss_pred EeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccC---eEEEECCCCCEEEeeCC
Confidence 9753211 10 1111111 234666655433 23345679999999764
No 379
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=22.52 E-value=3.4e+02 Score=22.69 Aligned_cols=77 Identities=8% Similarity=0.071 Sum_probs=37.4
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEec
Q 005473 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTG 638 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~g 638 (695)
..+.+-.||++++.- +...||...+... ++ ....+.+..+|.+++... ++. .||...+...
T Consensus 21 y~l~~q~DgNLvly~---~~~~vW~ant~~~-----~~--~~~~L~l~~dGnLvL~d~-~~~-~vWss~t~~~------- 81 (105)
T 4h3o_A 21 YHFIMQDDCNLVLYD---HSTSTWASNTEIG-----GK--SGCSAVLQSDGNFVVYDS-SGR-SLWASHSTRG------- 81 (105)
T ss_dssp EEEEECTTSCEEEEE---TTEEEEECCCCCT-----TC--CSCEEEECTTSCEEEECT-TCC-EEEECCCCCC-------
T ss_pred EEEEECCCCeEEEEE---CCEEEEEecCCCC-----CC--ccEEEEEeCCccEEEECC-CcE-EEEEecCCCC-------
Confidence 445555566655442 2234565443221 11 123467777887766543 333 4676554211
Q ss_pred CCCCeEEEEEecCCCeEE
Q 005473 639 HSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 639 h~~~V~sl~fspdg~~ll 656 (695)
.....+.+.++|..+|
T Consensus 82 --~~~~~l~L~ddGNlVl 97 (105)
T 4h3o_A 82 --SGNYILILQDDGNVII 97 (105)
T ss_dssp --SSCEEEEECTTSCEEE
T ss_pred --CCCEEEEEeCCCeEEE
Confidence 1223456677776433
No 380
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=22.52 E-value=9.1e+02 Score=27.65 Aligned_cols=104 Identities=12% Similarity=0.152 Sum_probs=48.6
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCc----EEEE-ECCCCeEEEEecc--c-----C--CCeEEEEEcCC-CCEEEEEeCCC
Q 005473 556 SKVESCHFSPD-GKLLATGGHDKK----AVLW-CTESFTVKSTLEE--H-----T--QWITDVRFSPS-LSRLATSSADR 619 (695)
Q Consensus 556 ~~V~~v~fspd-g~~LaSgs~Dg~----V~IW-Dl~t~~~~~~l~~--H-----~--~~V~~v~~spd-g~~LaTgs~Dg 619 (695)
..|.+|+++|. ...++.+..+.. ..|| ..+.++.-..+.. . . ..+..++++|. ...++.+...+
T Consensus 64 ~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 64 MGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp CSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred CceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 35899999884 344544443321 3344 3344443322211 0 1 13567888874 34566665344
Q ss_pred eEEEEECCCCCeeEEEEe------cCCCCeEEEEEecCCCeEEEEEeC
Q 005473 620 TVRVWDTENPDYSLRTFT------GHSTTVMSLDFHPSKEDLLCSCDN 661 (695)
Q Consensus 620 tIrvWDl~t~~~~l~~~~------gh~~~V~sl~fspdg~~llaSgs~ 661 (695)
.| |-...+...=..+. .....+..|.++|.....++.+..
T Consensus 144 gl--~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 189 (789)
T 1sqj_A 144 GI--WKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASAT 189 (789)
T ss_dssp CE--EEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEES
T ss_pred CE--EEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEc
Confidence 33 32322221111111 112457889999864433334443
No 381
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.08 E-value=3.1e+02 Score=23.18 Aligned_cols=78 Identities=9% Similarity=0.053 Sum_probs=36.9
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeEEEEecccCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCeeEEEEec
Q 005473 559 ESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWITDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTG 638 (695)
Q Consensus 559 ~~v~fspdg~~LaSgs~Dg~V~IWDl~t~~~~~~l~~H~~~V~~v~~spdg~~LaTgs~DgtIrvWDl~t~~~~l~~~~g 638 (695)
..+.+..||++++... ++ +|...+.. .+.-..+.+..+|.+++... ++.+.+|...+.. .
T Consensus 22 ~~L~~q~dGnLvl~~~-~~---vW~snt~~--------~~~~~~l~l~~dGNLVl~~~-~~~~~vW~S~t~~-------~ 81 (111)
T 3mez_A 22 AAFVMQGDCNLVLYNE-AG---GFQSNTHG--------RGVDCTLRLNNRGQLEIHSA-NSNTPVWVYPRSV-------N 81 (111)
T ss_dssp EEEEECTTSCEEEECS-SC---CEECCCTT--------SCSSCEEEECTTSCEEEECS-SCSSCSEEESSSC-------C
T ss_pred EEEEEccCCeEEEECC-CC---EEECCccc--------CCcCEEEEEcCCCcEEEEeC-CCCEEEEEecccc-------C
Confidence 4555666666655422 22 66654321 11113456666777666533 3333466443210 0
Q ss_pred CCCCeEEEEEecCCCeEE
Q 005473 639 HSTTVMSLDFHPSKEDLL 656 (695)
Q Consensus 639 h~~~V~sl~fspdg~~ll 656 (695)
.......+.+.+||..++
T Consensus 82 ~~~~~~~l~Lq~dGNlvl 99 (111)
T 3mez_A 82 TVRGNYAATLGPDQHVTI 99 (111)
T ss_dssp CCSSCCEEEECTTSCEEE
T ss_pred CCCcCEEEEECCCCeEEE
Confidence 111234566677776444
No 382
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=20.93 E-value=5.2e+02 Score=29.56 Aligned_cols=96 Identities=9% Similarity=0.129 Sum_probs=58.2
Q ss_pred CCCcEEEEECCCCe-------EEEE-ec-ccCCCeEEEEEcCCCCEEEEEeCCCe--EEEEECCCCCeeEEE-EecC-CC
Q 005473 575 HDKKAVLWCTESFT-------VKST-LE-EHTQWITDVRFSPSLSRLATSSADRT--VRVWDTENPDYSLRT-FTGH-ST 641 (695)
Q Consensus 575 ~Dg~V~IWDl~t~~-------~~~~-l~-~H~~~V~~v~~spdg~~LaTgs~Dgt--IrvWDl~t~~~~l~~-~~gh-~~ 641 (695)
-.+.|.+.|+.+.. .... +. .....|..+.|..+ .++++...++. |+++|+.++...+.. +.-. .+
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~ 396 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQN 396 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTT
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCe
Confidence 35778888886531 1222 32 23456778888865 67777777775 677777655311222 2211 24
Q ss_pred CeEEEEEecCCCeEEEEEeC---CCcEEEEECC
Q 005473 642 TVMSLDFHPSKEDLLCSCDN---NSEIRYWSIN 671 (695)
Q Consensus 642 ~V~sl~fspdg~~llaSgs~---Dg~IriWDl~ 671 (695)
.|..+.+.+++..++++.+. -+.|..+|+.
T Consensus 397 ~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 397 AIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp CEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 56666777887777766653 3667788876
Done!