BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005476
(695 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/725 (39%), Positives = 444/725 (61%), Gaps = 34/725 (4%)
Query: 5 LHF-PAKTVTTITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAA 63
HF P+ + +P ++ CKT + L +HA +IK H L+E
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76
Query: 64 ILIPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFT 123
+ + YA+S+F I EP+ +N M R L P A+ LY M+ + P+ +T
Sbjct: 77 LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 124 FACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMS 183
F LK+C++ +A +EG+QIH +LK G V +LI +Y GR++ A K+FD+
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 184 NRDVFS-------------------------------WNSMFSGYVKTECWREIVDLFNE 212
+RDV S WN+M SGY +T ++E ++LF +
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 213 MRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGH 272
M V+ DE T++ V+ AC + IELG + ++++ N+K++ A++D+Y+KCG
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 273 VDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSC 332
++ A LFE++ KDV++W+ +I GY+ KEAL +F +M + PN+VTM+S+L
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 333 CAVLGALETGKWVHLYVKKKRMELT--ITLGTALMDFYAKCGLIENAVEVFKKMPLKNVF 390
CA LGA++ G+W+H+Y+ K+ +T +L T+L+D YAKCG IE A +VF + K++
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 391 FWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSM 450
W +I A +G+ + + + + MR+ I+P+D+ F+ +LSACSH GM+D GR +F +M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Query: 451 SRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKV 510
++D+ + P++EHYGCM+D+LG +GL +EA + I M + P+ VIW +LL AC+ H NV++
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556
Query: 511 GEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDG 570
GE +NL+ +EP + G Y+LLS+IYASAGR + + + ++G+KK PGCS IE+D
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Query: 571 EIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEK 630
++EF+ D P +E+Y E M ++ AG+VP+T++ + EE+ KE ++ HHSEK
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 676
Query: 631 LAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCS 690
LAIAFGLI PGT + I KNLRVC +CH ATK+ISK++ REI+ RDRTRFHHF++G CS
Sbjct: 677 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 736
Query: 691 CNDYW 695
CNDYW
Sbjct: 737 CNDYW 741
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust.
Identities = 280/704 (39%), Positives = 432/704 (61%), Gaps = 35/704 (4%)
Query: 26 IVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPD 85
++++C + + L Q H H+I++ +P + L AA L +++YA +F +I +P+
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAA-LSSFASLEYARKVFDEIPKPN 94
Query: 86 SSAYNIMIRAFTLKQSPQEAVMLYKTMLQNS-VEPDRFTFACTLKACSRIRALEEGEQIH 144
S A+N +IRA+ P ++ + M+ S P+++TF +KA + + +L G+ +H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 145 AQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWR 204
+KS G V N+LIH Y +CG +D A K+F + +DV SWNSM +G+V+
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 205 EIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVV 264
+ ++LF +M VK VT++ VL AC ++ ++E G + Y+EE +N N+ L A++
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 265 DMYAKCGHVDKARRLFEQM----NI---------------------------KDVVAWSA 293
DMY KCG ++ A+RLF+ M N+ KD+VAW+A
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 294 MISGYSQARRCKEALGVFHDMQMA-NVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKK 352
+IS Y Q + EAL VFH++Q+ N+ N++T+VS LS CA +GALE G+W+H Y+KK
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 353 RMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETY 412
+ + + +AL+ Y+KCG +E + EVF + ++VF W+ +I LA +G G A++ +
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 413 YIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGR 472
Y M+E N++PN V F V ACSH G+VDE LF M ++ + P +HY C+VD+LGR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 473 AGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILL 532
+G +E+A +FI+ MPIPP+ +W LL AC+ H N+ + E + L+ LEP + G ++LL
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574
Query: 533 SDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDAT 592
S+IYA G+ E+ + MR G+KK PGCS IE+DG I+EFL+ DN P ++VY
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Query: 593 ENMMKRIKSAGYVPNTADA-RLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKN 651
+M+++KS GY P + ++ EE+ KE S+ HSEKLAI +GLI IR+ KN
Sbjct: 635 HEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKN 694
Query: 652 LRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
LRVC DCH+ K+IS++++REI+VRDR RFHHF+ G CSCND+W
Sbjct: 695 LRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/685 (38%), Positives = 401/685 (58%), Gaps = 4/685 (0%)
Query: 11 TVTTITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATT 70
TV + T + KTLI C T L Q+H LI H + T NLL + T
Sbjct: 5 TVPSATSKVQQIKTLISVAC-TVNHLKQIHVSLINHHLH-HDTFLVNLLLKRTLFFRQTK 62
Query: 71 MDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKA 130
Y L F P+ YN +I F E + L+ ++ ++ + FTF LKA
Sbjct: 63 YSYLL--FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 131 CSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSW 190
C+R + + G +H+ ++K GF +L+ +Y+ GR++ A K+FD + +R V +W
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 191 NSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEE 250
++FSGY + RE +DLF +M ++GVK D ++ VL AC + D++ G WI +YMEE
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 251 KELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGV 310
E+ N + T +V++YAKCG ++KAR +F+ M KD+V WS MI GY+ KE + +
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 311 FHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAK 370
F M N+ P++ ++V LS CA LGAL+ G+W + + + + AL+D YAK
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 371 CGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAV 430
CG + EVFK+M K++ I LA NG + + + + I P+ F+ +
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 431 LSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPP 490
L C H G++ +G F ++S + L+ +EHYGCMVD+ GRAG++++AY+ I +MP+ P
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 491 NPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMN 550
N ++W LL+ CR K+ ++ E LK L+ LEP ++G+Y+ LS+IY+ GR ++A V +
Sbjct: 481 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 540
Query: 551 QMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTAD 610
M ++G+KK PG S IEL+G+++EFLA+D P ++Y E++ ++ G+VP T
Sbjct: 541 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 600
Query: 611 ARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFN 670
D EE++KE + +HSEKLA+A GLI G IR+ KNLRVC DCH K+ISK+
Sbjct: 601 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 660
Query: 671 REIVVRDRTRFHHFKEGSCSCNDYW 695
REIVVRD RFH F GSCSCNDYW
Sbjct: 661 REIVVRDNNRFHCFTNGSCSCNDYW 685
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/705 (37%), Positives = 418/705 (59%), Gaps = 43/705 (6%)
Query: 30 CKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKI-NEPDSSA 88
CK+ + Q+HAH++++ +N ++ + L ++ + + YAL++F I + P+S
Sbjct: 22 CKSLNHIKQLHAHILRTV--INHKLN-SFLFNLSVSSSSINLSYALNVFSSIPSPPESIV 78
Query: 89 YNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQIL 148
+N +R + P+ ++ Y+ + D+F+F LKA S++ AL EG ++H
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 149 KSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVD 208
K C V + +YA+CGRI+ AR +FD MS+RDV +WN+M Y + E
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 209 LFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYA 268
LF EM+D V DE+ L N++ ACGR ++ I E++ E ++ + L+TA+V MYA
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 269 -------------------------------KCGHVDKARRLFEQMNIKDVVAWSAMISG 297
KCG +D A+ +F+Q KD+V W+ MIS
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISA 318
Query: 298 YSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELT 357
Y ++ +EAL VF +M + + P+ V+M SV+S CA LG L+ KWVH + +E
Sbjct: 319 YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE 378
Query: 358 ITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMRE 417
+++ AL++ YAKCG ++ +VF+KMP +NV W+ +I L+ +G+ AL + M++
Sbjct: 379 LSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ 438
Query: 418 KNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVE 477
+N+EPN+V F+ VL CSH G+V+EG+++F SM+ ++++ P++EHYGCMVD+ GRA L+
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLR 498
Query: 478 EAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYA 537
EA + I++MP+ N VIW +L++ACR H +++G+ + K ++ LEP H G +L+S+IYA
Sbjct: 499 EALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYA 558
Query: 538 SAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMK 597
R ED + M E+ + K G S I+ +G+ +EFL D E+Y + ++
Sbjct: 559 REQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVS 618
Query: 598 RIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLI-------RASPGTTIRISK 650
++K AGYVP+ +D EE++K+ V HSEKLA+ FGL+ + S G IRI K
Sbjct: 619 KLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCG-VIRIVK 677
Query: 651 NLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
NLRVC DCH K++SKV+ REI+VRDRTRFH +K G CSC DYW
Sbjct: 678 NLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 501 bits (1291), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/675 (38%), Positives = 399/675 (59%), Gaps = 7/675 (1%)
Query: 24 TLIVQQCKTTKDL---NQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHK 80
T +++ C +L ++H L+KS F L+ L A ++ A +F +
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA---KCRQVNEARKVFDR 195
Query: 81 INEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEG 140
+ E D ++N ++ ++ + A+ + K+M + +++P T L A S +R + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 141 EQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKT 200
++IH ++SGF ++ L+ +YA CG ++ AR++FD M R+V SWNSM YV+
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 201 ECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLM 260
E +E + +F +M D GVK +V+++ L AC L D+E G +I + E L+ NV ++
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 261 TAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVV 320
+++ MY KC VD A +F ++ + +V+W+AMI G++Q R +AL F M+ V
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 321 PNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEV 380
P+ T VSV++ A L KW+H V + ++ + + TAL+D YAKCG I A +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 381 FKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMV 440
F M ++V W +I ++G G+ ALE + M++ I+PN V F++V+SACSH G+V
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 441 DEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLA 500
+ G + F M ++ +E M+HYG MVD+LGRAG + EA+ FI MP+ P ++ +L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 501 ACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKT 560
AC+ HKNV E++ + L L P G ++LL++IY +A E +V M QG++KT
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 561 PGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDK 620
PGCS++E+ E++ F + P K++Y E ++ IK AGYVP+T + L E D K
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT-NLVLGVENDVK 734
Query: 621 EASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTR 680
E ++ HSEKLAI+FGL+ + GTTI + KNLRVC DCHNATK IS V REIVVRD R
Sbjct: 735 EQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQR 794
Query: 681 FHHFKEGSCSCNDYW 695
FHHFK G+CSC DYW
Sbjct: 795 FHHFKNGACSCGDYW 809
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 281/585 (48%), Gaps = 44/585 (7%)
Query: 6 HFPAKTVTTITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAIL 65
HF ++ E+P L++++C + K+L Q+ + K+ + L+ ++
Sbjct: 23 HFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLV---SLF 79
Query: 66 IPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFA 125
++D A +F I+ + Y+ M++ F +A+ + M + VEP + F
Sbjct: 80 CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139
Query: 126 CTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNR 185
LK C L G++IH ++KSGF L ++YA C +++ ARK+FDRM R
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 186 DVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWIS 245
D+ SWN++ +GY + R +++ M + +K +T+++VL A L I +G I
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 246 EYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCK 305
Y + V + TA+VDMYAKCG ++ AR+LF+ M ++VV+W++MI Y Q K
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 306 EALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALM 365
EA+ +F M V P +V+++ L CA LG LE G+++H + ++ +++ +L+
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 366 DFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDV 425
Y KC ++ A +F K+ + + W +I A NG+ AL + MR + ++P+
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 426 AFIAVLSACSHVGMVDEGRELFVSMSRD----------------------------FDL- 456
+++V++A + + + + + + R FD+
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 457 -EPRMEHYGCMVDILGRAGLVEEAYQFIKNM---PIPPNPVIWRTLLAACRAHKNVKVGE 512
E + + M+D G G + A + + M I PN V + ++++AC V+ G
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG- 558
Query: 513 ESLKNLVTLEPMHSGD-----YILLSDIYASAGRCEDALRVMNQM 552
LK ++ +S + Y + D+ AGR +A + QM
Sbjct: 559 --LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/672 (38%), Positives = 399/672 (59%), Gaps = 18/672 (2%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
QVHA+ ++ + LN I L+ L + L F D +N ++ +
Sbjct: 223 QVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSF---GGRDLVTWNTVLSSLC 278
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSG-FGCRQ 156
+ EA+ + M+ VEPD FT + L ACS + L G+++HA LK+G
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 157 LVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRD- 215
V + L+ +Y NC ++ R++FD M +R + WN+M +GY + E +E + LF M +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 216 LGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDK 275
G+ + T+ V+ AC R I ++ ++ L+ + + ++DMY++ G +D
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 276 ARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQ-----------MANVVPNEV 324
A R+F +M +D+V W+ MI+GY + ++AL + H MQ ++ PN +
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 325 TMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKM 384
T++++L CA L AL GK +H Y K + + +G+AL+D YAKCG ++ + +VF ++
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 385 PLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGR 444
P KNV W V+I +G G+ A++ +M + ++PN+V FI+V +ACSH GMVDEG
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 445 ELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPV-IWRTLLAACR 503
+F M D+ +EP +HY C+VD+LGRAG ++EAYQ + MP N W +LL A R
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASR 698
Query: 504 AHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGC 563
H N+++GE + +NL+ LEP + Y+LL++IY+SAG + A V M+EQG++K PGC
Sbjct: 699 IHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 564 SLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEAS 623
S IE E+++F+A D+ P +++ E + +R++ GYVP+T+ + EED+KE
Sbjct: 759 SWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEIL 818
Query: 624 VAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHH 683
+ HSEKLAIAFG++ SPGT IR++KNLRVC DCH ATK ISK+ +REI++RD RFH
Sbjct: 819 LCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHR 878
Query: 684 FKEGSCSCNDYW 695
FK G+CSC DYW
Sbjct: 879 FKNGTCSCGDYW 890
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 217/444 (48%), Gaps = 18/444 (4%)
Query: 68 ATTMDYALSIFHKINEPDSSAYNI-MIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFAC 126
A+ + A SIF I++ S + I ++R+ +EAV+ Y M+ ++PD + F
Sbjct: 45 ASAVSGAPSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPA 102
Query: 127 TLKACSRIRALEEGEQIHAQILKSGFGCRQL-VTNTLIHLYANCGRIDIARKMFDRMSNR 185
LKA + ++ +E G+QIHA + K G+G + V NTL++LY CG K+FDR+S R
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 186 DVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIE---LGG 242
+ SWNS+ S E W ++ F M D V+ TL++V+ AC L E +G
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 243 WISEY-MEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQA 301
+ Y + + ELN + + +V MY K G + ++ L +D+V W+ ++S Q
Sbjct: 223 QVHAYGLRKGELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 302 RRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLY-VKKKRMELTITL 360
+ EAL +M + V P+E T+ SVL C+ L L TGK +H Y +K ++ +
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 361 GTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREK-N 419
G+AL+D Y C + + VF M + + W +I + N + AL + M E
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 420 IEPNDVAFIAVLSACSHVGMVD--EGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVE 477
+ N V+ AC G E FV + R D + +++ ++D+ R G ++
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFV-VKRGLDRDRFVQN--TLMDMYSRLGKID 457
Query: 478 EAYQFIKNMPIPPNPVIWRTLLAA 501
A + M + V W T++
Sbjct: 458 IAMRIFGKME-DRDLVTWNTMITG 480
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/672 (36%), Positives = 394/672 (58%), Gaps = 6/672 (0%)
Query: 26 IVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPD 85
++ L Q+HA L+ + + L+ A++ T +A +F + P
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDIT---FARQVFDDLPRPQ 83
Query: 86 SSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHA 145
+N +IR ++ Q+A+++Y M V PD FTF LKACS + L+ G +HA
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 146 QILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMS--NRDVFSWNSMFSGYVKTECW 203
Q+ + GF V N LI LYA C R+ AR +F+ + R + SW ++ S Y +
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 204 REIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAV 263
E +++F++MR + VK D V L++VL A L D++ G I + + L L+ ++
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 264 VDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNE 323
MYAKCG V A+ LF++M +++ W+AMISGY++ +EA+ +FH+M +V P+
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 324 VTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKK 383
+++ S +S CA +G+LE + ++ YV + + + +AL+D +AKCG +E A VF +
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 384 MPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEG 443
++V W+ +I +G+ A+ Y M + PNDV F+ +L AC+H GMV EG
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 444 RELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACR 503
F M+ D + P+ +HY C++D+LGRAG +++AY+ IK MP+ P +W LL+AC+
Sbjct: 444 WWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502
Query: 504 AHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGC 563
H++V++GE + + L +++P ++G Y+ LS++YA+A + V +M+E+G+ K GC
Sbjct: 503 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 562
Query: 564 SLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEAS 623
S +E+ G + F D P ++E+ E + R+K G+V N + D +++ E +
Sbjct: 563 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEET 622
Query: 624 VAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHH 683
+ HSE++AIA+GLI GT +RI+KNLR C +CH ATK+ISK+ +REIVVRD RFHH
Sbjct: 623 LCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHH 682
Query: 684 FKEGSCSCNDYW 695
FK+G CSC DYW
Sbjct: 683 FKDGVCSCGDYW 694
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/691 (36%), Positives = 404/691 (58%), Gaps = 36/691 (5%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q+H ++K + + + +L+ A +D A +F +++E + ++ MI +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYA---ECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 98 LKQSPQEAVMLYKTMLQNS-VEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQ 156
+ ++AV L+ M+++ V P+ T C + AC+++ LE GE+++A I SG
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 157 LVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDL 216
L+ + L+ +Y C ID+A+++FD ++ N+M S YV+ RE + +FN M D
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 217 GVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKC------ 270
GV+ D +++++ + +C +L +I G Y+ + A++DMY KC
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 271 -------------------------GHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCK 305
G VD A FE M K++V+W+ +ISG Q +
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 306 EALGVFHDMQ-MANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTAL 364
EA+ VF MQ V + VTM+S+ S C LGAL+ KW++ Y++K ++L + LGT L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 365 MDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPND 424
+D +++CG E+A+ +F + ++V WT I +A G ERA+E + M E+ ++P+
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 425 VAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIK 484
VAF+ L+ACSH G+V +G+E+F SM + + P HYGCMVD+LGRAGL+EEA Q I+
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 485 NMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCED 544
+MP+ PN VIW +LLAACR NV++ + + + L P +G Y+LLS++YASAGR D
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 545 ALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGY 604
+V M+E+G++K PG S I++ G+ +EF + D P + + + +R G+
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 751
Query: 605 VPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKI 664
VP+ ++ +D +E +K ++ HSEKLA+A+GLI ++ GTTIRI KNLRVC+DCH+ K
Sbjct: 752 VPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKF 811
Query: 665 ISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
SKV+NREI++RD RFH+ ++G CSC D+W
Sbjct: 812 ASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/630 (27%), Positives = 288/630 (45%), Gaps = 86/630 (13%)
Query: 5 LHF-PAKTVTTITQFPE----------NPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPT 53
LH P TT T P P +L + CKT +L H L K + +
Sbjct: 8 LHLSPMVLATTTTTKPSLLNQSKCTKATPSSL--KNCKTIDELKMFHRSLTKQGLDNDVS 65
Query: 54 ISENLLEAAAILIPATTMDYALSIFHKINEPDSS-AYNIMIRAFTLKQSPQEAVMLYKTM 112
L+ + L ++ +A +F + YN +IR + EA++L+ M
Sbjct: 66 TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125
Query: 113 LQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRI 172
+ + + PD++TF L AC++ RA G QIH I+K G+ V N+L+H YA CG +
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 173 DIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEM-RDLGVKFDEVTLINVLMA 231
D ARK+FD MS R+V SW SM GY + + ++ VDLF M RD V + VT++ V+ A
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 232 CGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAW 291
C +L D+E G + ++ + N +++A+VDMY KC +D A+RLF++ ++
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 292 SAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKK 351
+AM S Y + +EALGVF+ M + V P+ ++M+S +S C+ L + GK H YV +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 352 KRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALET 411
E + AL+D Y KC + A +F +M K V W ++ NG+ + A ET
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 412 YYIMREKNI--------------------------------EPNDVAFIAVLSACSHVGM 439
+ M EKNI + V +++ SAC H+G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 440 VDEGRELFVSMSRD-FDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMP----------- 487
+D + ++ + ++ L+ R+ +VD+ R G E A ++
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGT--TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAI 543
Query: 488 -----------------------IPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPM 524
+ P+ V + L AC V+ G+E +++ L +
Sbjct: 544 GAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGV 603
Query: 525 HSGD--YILLSDIYASAGRCEDALRVMNQM 552
D Y + D+ AG E+A++++ M
Sbjct: 604 SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 482 bits (1241), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/615 (40%), Positives = 364/615 (59%), Gaps = 38/615 (6%)
Query: 116 SVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDI- 174
S+E + + L+ CS+ EE +QIHA++LK+G + + D
Sbjct: 9 SLEHNLYETMSCLQRCSK---QEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFL 65
Query: 175 --ARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMAC 232
A+ +FD D F WN M G+ ++ + L+ M + T ++L AC
Sbjct: 66 PYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC 125
Query: 233 GRL----------ADIELGGW------ISEYMEEKELNGNVKLM---------------T 261
L A I G+ ++ + + GN KL
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 262 AVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVP 321
+V+ Y K G +D A LF +M K+ ++W+ MISGY QA KEAL +FH+MQ ++V P
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 322 NEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVF 381
+ V++ + LS CA LGALE GKW+H Y+ K R+ + LG L+D YAKCG +E A+EVF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 382 KKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVD 441
K + K+V WT LI A +G G A+ + M++ I+PN + F AVL+ACS+ G+V+
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 442 EGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAA 501
EG+ +F SM RD++L+P +EHYGC+VD+LGRAGL++EA +FI+ MP+ PN VIW LL A
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 502 CRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTP 561
CR HKN+++GEE + L+ ++P H G Y+ ++I+A + + A M+EQG+ K P
Sbjct: 426 CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVP 485
Query: 562 GCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLD-AEEDDK 620
GCS I L+G +EFLA D P +++ M ++++ GYVP + LD ++D++
Sbjct: 486 GCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDER 545
Query: 621 EASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTR 680
EA V HSEKLAI +GLI+ PGT IRI KNLRVC DCH TK+ISK++ R+IV+RDRTR
Sbjct: 546 EAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTR 605
Query: 681 FHHFKEGSCSCNDYW 695
FHHF++G CSC DYW
Sbjct: 606 FHHFRDGKCSCGDYW 620
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 209/404 (51%), Gaps = 33/404 (8%)
Query: 27 VQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDS 86
+Q+C ++L Q+HA ++K+ + L + + YA +F + PD+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 87 SAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQ 146
+N+MIR F+ P+ +++LY+ ML +S + +TF LKACS + A EE QIHAQ
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 147 ILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTE----- 201
I K G+ N+LI+ YA G +A +FDR+ D SWNS+ GYVK
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 202 -------------CW-------------REIVDLFNEMRDLGVKFDEVTLINVLMACGRL 235
W +E + LF+EM++ V+ D V+L N L AC +L
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 236 ADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMI 295
+E G WI Y+ + + + L ++DMYAKCG +++A +F+ + K V AW+A+I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320
Query: 296 SGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKK-RM 354
SGY+ +EA+ F +MQ + PN +T +VL+ C+ G +E GK + +++ +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 355 ELTITLGTALMDFYAKCGLIENAVEVFKKMPLK-NVFFWTVLIQ 397
+ TI ++D + GL++ A ++MPLK N W L++
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/630 (38%), Positives = 384/630 (60%), Gaps = 10/630 (1%)
Query: 76 SIFHK-INEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRI 134
++F++ +++ D ++N +I EA++ + +M + S+ P R +F C +KACS +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 135 RALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMF 194
+ G+Q H Q G+ V++ LI +Y+ CG+++ ARK+FD + R++ SW SM
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 195 SGYVKTECWREIVDLFNEM------RDLGVKFDEVTLINVLMACGRLADIELGGWISEYM 248
GY + V LF ++ D + D + L++V+ AC R+ L I ++
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 249 EEKELNGNVKLMTAVVDMYAKCGH--VDKARRLFEQMNIKDVVAWSAMISGYSQARRCKE 306
++ + V + ++D YAK G V AR++F+Q+ KD V++++++S Y+Q+ E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 307 ALGVFHDMQMANVVP-NEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALM 365
A VF + VV N +T+ +VL + GAL GK +H V + +E + +GT+++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 366 DFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDV 425
D Y KCG +E A + F +M KNV WT +I +G +ALE + M + + PN +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 426 AFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKN 485
F++VL+ACSH G+ EG F +M F +EP +EHYGCMVD+LGRAG +++AY I+
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 486 MPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDA 545
M + P+ +IW +LLAACR HKNV++ E S+ L L+ + G Y+LLS IYA AGR +D
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 546 LRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYV 605
RV M+ +G+ K PG SL+EL+GE++ FL D P +++Y+ + +++ AGYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 606 PNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKII 665
NT+ D +E++KE ++ HSEKLAIAFG++ PG+T+ + KNLRVC+DCHN K+I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 666 SKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
SK+ +RE VVRD RFHHFK+G CSC DYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 192/355 (54%), Gaps = 13/355 (3%)
Query: 55 SENLLEAAAILIPAT--TMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTM 112
S+ + +A I++ +T ++ A +F +I + + ++ MIR + L + +AV L+K +
Sbjct: 109 SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
Query: 113 LQNSVEPDRFTF------ACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLY 166
L + + D F + ACSR+ A E IH+ ++K GF V NTL+ Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 167 ANCGR--IDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEM-RDLGVKFDEV 223
A G + +ARK+FD++ ++D S+NS+ S Y ++ E ++F + ++ V F+ +
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 224 TLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQM 283
TL VL+A + +G I + + L +V + T+++DMY KCG V+ AR+ F++M
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 284 NIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGA-LETG 342
K+V +W+AMI+GY +AL +F M + V PN +T VSVL+ C+ G +E
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 343 KWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLK-NVFFWTVLI 396
+W + + +E + ++D + G ++ A ++ ++M +K + W+ L+
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Score = 40.0 bits (92), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Query: 7 FPAKTVTTITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILI 66
F A T++T+ + L + +C +H +I+ + + ++++ +
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKC--------IHDQVIRMGLEDDVIVGTSIID---MYC 333
Query: 67 PATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFAC 126
++ A F ++ + ++ MI + + +A+ L+ M+ + V P+ TF
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 127 TLKACSRIRALEEGEQIHAQILKSGFGCRQLVTN--TLIHLYANCGRIDIARKMFDRMSN 184
L ACS EG + +K FG + + ++ L G + A + RM
Sbjct: 394 VLAACSHAGLHVEGWRWF-NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 185 R-DVFSWNSMFS 195
+ D W+S+ +
Sbjct: 453 KPDSIIWSSLLA 464
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/617 (40%), Positives = 368/617 (59%), Gaps = 55/617 (8%)
Query: 131 CSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCG----RIDIARKMFDRMSNRD 186
C IR L QIHA +KSG L ++ A +D A K+F++M R+
Sbjct: 33 CRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 187 VFSWNSMFSGYVKTECWREIV--DLFNEM-RDLGVKFDEVTLINVLMACGRLADIELGGW 243
FSWN++ G+ +++ + ++ LF EM D V+ + T +VL AC + I+ G
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 244 I-----------SEYM----------------------------------EEKELNGNVK 258
I E++ + ++ +G +
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 259 LMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMAN 318
L ++D Y + G AR LF++M + VV+W+ MISGYS K+A+ VF +M+ +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 319 VVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAV 378
+ PN VT+VSVL + LG+LE G+W+HLY + + + LG+AL+D Y+KCG+IE A+
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 379 EVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVG 438
VF+++P +NV W+ +I A +GQ A++ + MR+ + P+DVA+I +L+ACSH G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 439 MVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTL 498
+V+EGR F M LEPR+EHYGCMVD+LGR+GL++EA +FI NMPI P+ VIW+ L
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 499 LAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIK 558
L ACR NV++G+ L+ + P SG Y+ LS++YAS G + + +M+E+ I+
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIR 509
Query: 559 KTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEED 618
K PGCSLI++DG ++EF+ ED+ P KE+ + +++ AGY P T L+ EE+
Sbjct: 510 KDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE 569
Query: 619 DKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDR 678
DKE + +HSEK+A AFGLI SPG IRI KNLR+C DCH++ K+ISKV+ R+I VRDR
Sbjct: 570 DKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDR 629
Query: 679 TRFHHFKEGSCSCNDYW 695
RFHHF++GSCSC DYW
Sbjct: 630 KRFHHFQDGSCSCMDYW 646
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 252/504 (50%), Gaps = 71/504 (14%)
Query: 27 VQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATT------MDYALSIFHK 80
+ C+T +DL+Q+HA IKS + + L A + AT+ +DYA IF++
Sbjct: 30 INNCRTIRDLSQIHAVFIKS-----GQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84
Query: 81 INEPDSSAYNIMIRAFTLKQSPQEAV---MLYKTMLQNSVEPDRFTFACTLKACSRIRAL 137
+ + + ++N +IR F+ + + + Y+ M VEP+RFTF LKAC++ +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 138 EEGEQIHAQILKSGFGCRQLVTNTLIHLYANCG--------------------------- 170
+EG+QIH LK GFG + V + L+ +Y CG
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 171 ---------RID---------IARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNE 212
ID AR +FD+M R V SWN+M SGY +++ V++F E
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 213 MRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGH 272
M+ ++ + VTL++VL A RL +ELG W+ Y E+ + + L +A++DMY+KCG
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 273 VDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSC 332
++KA +FE++ ++V+ WSAMI+G++ + +A+ F M+ A V P++V +++L+
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 333 CAVLGALETG-KWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLK-NVF 390
C+ G +E G ++ V +E I ++D + GL++ A E MP+K +
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 391 FWTVLIQCLASNGQGERALETYYIMREKNIEPNDV-AFIAVLSACSHVGMVDEGRELFVS 449
W L+ G E I+ ++ P+D A++A+ + + G E E+ +
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANIL--MDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 450 MS-RDFDLEPRMEHYGC-MVDILG 471
M +D +P GC ++DI G
Sbjct: 503 MKEKDIRKDP-----GCSLIDIDG 521
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/659 (35%), Positives = 385/659 (58%), Gaps = 4/659 (0%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q+H ++KS F ++ +L+ A + +D A +F ++ E D ++N +I +
Sbjct: 216 QLHGFILKSGFGERNSVGNSLV---AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
++ + ++ ML + +E D T C+ R + G +H+ +K+ F
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG 217
NTL+ +Y+ CG +D A+ +F MS+R V S+ SM +GY + E V LF EM + G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 218 VKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKAR 277
+ D T+ VL C R ++ G + E+++E +L ++ + A++DMYAKCG + +A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 278 RLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDM-QMANVVPNEVTMVSVLSCCAVL 336
+F +M +KD+++W+ +I GYS+ EAL +F+ + + P+E T+ VL CA L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 337 GALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLI 396
A + G+ +H Y+ + + +L+D YAKCG + A +F + K++ WTV+I
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 397 QCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDL 456
+G G+ A+ + MR+ IE ++++F+++L ACSH G+VDEG F M + +
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 457 EPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLK 516
EP +EHY C+VD+L R G + +AY+FI+NMPIPP+ IW LL CR H +VK+ E+ +
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 517 NLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFL 576
+ LEP ++G Y+L+++IYA A + E R+ ++ ++G++K PGCS IE+ G + F+
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 752
Query: 577 AEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFG 636
A D+ P + + + R+ GY P T A +DAEE +KE ++ HSEKLA+A G
Sbjct: 753 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 812
Query: 637 LIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
+I + G IR++KNLRVC DCH K +SK+ REIV+RD RFH FK+G CSC +W
Sbjct: 813 IISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 287/562 (51%), Gaps = 18/562 (3%)
Query: 4 TLHFPAKTVTTITQFPENPKTL--IVQQC---KTTKDLNQVHAHLIKSRFHLNPTISENL 58
L K + ++ +P+TL ++Q C K+ KD +V + + F ++ + L
Sbjct: 76 NLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL 135
Query: 59 LEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVE 118
+ + + A +F ++ + +NI++ ++ L+K M+ + VE
Sbjct: 136 ---SLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Query: 119 PDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKM 178
D +TF+C K+ S +R++ GEQ+H ILKSGFG R V N+L+ Y R+D ARK+
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 252
Query: 179 FDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADI 238
FD M+ RDV SWNS+ +GYV + + +F +M G++ D T+++V C I
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312
Query: 239 ELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGY 298
LG + + + + ++DMY+KCG +D A+ +F +M+ + VV++++MI+GY
Sbjct: 313 SLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY 372
Query: 299 SQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTI 358
++ EA+ +F +M+ + P+ T+ +VL+CCA L+ GK VH ++K+ + I
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 359 TLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETY-YIMRE 417
+ ALMD YAKCG ++ A VF +M +K++ W +I + N AL + ++ E
Sbjct: 433 FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Query: 418 KNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVE 477
K P++ VL AC+ + D+GRE+ + R+ R +VD+ + G +
Sbjct: 493 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALL 551
Query: 478 EAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEE--SLKNLVTLEPMHSGDYILLSDI 535
A+ ++ + V W ++A H G+E +L N + + + + +S +
Sbjct: 552 LAHMLFDDIA-SKDLVSWTVMIAGYGMH---GFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 536 YA--SAGRCEDALRVMNQMREQ 555
YA +G ++ R N MR +
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHE 629
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/682 (37%), Positives = 384/682 (56%), Gaps = 29/682 (4%)
Query: 26 IVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPD 85
+++ C+T D N++H +K F + ++ +L+ + + A +F ++ D
Sbjct: 159 VLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIH---LYSRYKAVGNARILFDEMPVRD 215
Query: 86 SSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEP-DRFTFACTLKACSRIRALEEGEQIH 144
++N MI + + +EA+ L N + D T L AC+ G IH
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 145 AQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWR 204
+ +K G V+N LI LYA GR+ +K+FDRM RD+ SWNS+ Y E
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 205 EIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIEL----------GGWISEYMEEKELN 254
+ LF EMR ++ D +TLI++ +L DI GW E
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-------- 382
Query: 255 GNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDM 314
++ + AVV MYAK G VD AR +F + DV++W+ +ISGY+Q EA+ +++ M
Sbjct: 383 -DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 315 QM-ANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGL 373
+ + N+ T VSVL C+ GAL G +H + K + L + + T+L D Y KCG
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 374 IENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSA 433
+E+A+ +F ++P N W LI C +G GE+A+ + M ++ ++P+ + F+ +LSA
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 434 CSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPV 493
CSH G+VDEG+ F M D+ + P ++HYGCMVD+ GRAG +E A +FIK+M + P+
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 494 IWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMR 553
IW LL+ACR H NV +G+ + ++L +EP H G ++LLS++YASAG+ E + +
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 554 EQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARL 613
+G++KTPG S +E+D ++ F + P ++E+Y + ++K GYVP+
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741
Query: 614 DAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREI 673
D E+D+KE + HSE+LAIAF LI TTIRI KNLRVC DCH+ TK ISK+ REI
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801
Query: 674 VVRDRTRFHHFKEGSCSCNDYW 695
+VRD RFHHFK G CSC DYW
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 163/570 (28%), Positives = 272/570 (47%), Gaps = 52/570 (9%)
Query: 26 IVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPD 85
+ + C + +HA L+ S+ N IS L+ L + A F I D
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL---GNVALARHTFDHIQNRD 116
Query: 86 SSAYNIMIRAFTLKQSPQEAVMLYKT-MLQNSVEPDRFTFACTLKACSRIRALEEGEQIH 144
A+N+MI + + E + + ML + + PD TF LKAC R + +G +IH
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIH 173
Query: 145 AQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWR 204
LK GF V +LIHLY+ + AR +FD M RD+ SWN+M SGY ++ +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 205 EIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVV 264
E + L N +R + D VT++++L AC D G I Y + L + + ++
Sbjct: 234 EALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 265 DMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEV 324
D+YA+ G + +++F++M ++D+++W+++I Y + A+ +F +M+++ + P+ +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 325 TMVSVLSCCAVLGALETGKWVHLYVKKKRMEL-TITLGTALMDFYAKCGLIENAVEVFKK 383
T++S+ S + LG + + V + +K L IT+G A++ YAK GL+++A VF
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 384 MPLKNVFFWTVLIQCLASNGQGERALETYYIMREKN-IEPNDVAFIAVLSACSHVGMVDE 442
+P +V W +I A NG A+E Y IM E+ I N +++VL ACS G + +
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 443 GRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAAC 502
G +L + ++ L + + D+ G+ G +E+A +P N V W TL+A
Sbjct: 470 GMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACH 527
Query: 503 RAH----KNVKVGEESLK--------NLVTLEPM--HSG--------------------- 527
H K V + +E L VTL HSG
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 528 --DYILLSDIYASAGRCEDALRVMNQMREQ 555
Y + D+Y AG+ E AL+ + M Q
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQ 617
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/626 (38%), Positives = 376/626 (60%), Gaps = 18/626 (2%)
Query: 71 MDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKA 130
+D A S+F ++ E + ++N ++ A+ +EA ML+K+ ++ ++ C L
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGG 228
Query: 131 CSRIRALEEGEQIHAQILKSGFGCRQLVT-NTLIHLYANCGRIDIARKMFDRMSNRDVFS 189
+ + + E Q + R +V+ NT+I YA G+ID AR++FD +DVF+
Sbjct: 229 FVKKKKIVEARQFFDSM-----NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 190 WNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYME 249
W +M SGY++ E +LF++M + +EV+ +L + +E+ + + M
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 250 EKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALG 309
+ NV ++ YA+CG + +A+ LF++M +D V+W+AMI+GYSQ+ EAL
Sbjct: 340 CR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 310 VFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYA 369
+F M+ N + S LS CA + ALE GK +H + K E +G AL+ Y
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 370 KCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIA 429
KCG IE A ++FK+M K++ W +I + +G GE AL + M+ + ++P+D +A
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 430 VLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIP 489
VLSACSH G+VD+GR+ F +M++D+ + P +HY CMVD+LGRAGL+E+A+ +KNMP
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575
Query: 490 PNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVM 549
P+ IW TLL A R H N ++ E + + +EP +SG Y+LLS++YAS+GR D ++
Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 635
Query: 550 NQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTA 609
+MR++G+KK PG S IE+ + + F D P E++ E + R+K AGYV T+
Sbjct: 636 VRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
Query: 610 DARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVF 669
D EE++KE V +HSE+LA+A+G++R S G IR+ KNLRVC DCHNA K ++++
Sbjct: 696 VVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARIT 755
Query: 670 NREIVVRDRTRFHHFKEGSCSCNDYW 695
R I++RD RFHHFK+GSCSC DYW
Sbjct: 756 GRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 183/408 (44%), Gaps = 47/408 (11%)
Query: 160 NTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEM--RDLG 217
N I Y GR + A ++F RM S+N M SGY++ + LF+EM RDL
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL- 126
Query: 218 VKFDEVTLINVLMACGRLADIELGGW--ISEYMEEKELNGNVKLMTAVVDMYAKCGHVDK 275
V ++ +M G + + LG + E M E++ V ++ YA+ G VD
Sbjct: 127 VSWN-------VMIKGYVRNRNLGKARELFEIMPERD----VCSWNTMLSGYAQNGCVDD 175
Query: 276 ARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAV 335
AR +F++M K+ V+W+A++S Y Q + +EA +F + +V C +
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN---------CLL 226
Query: 336 LGALETGKWVHLYVKKKRMEL-TITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTV 394
G ++ K V M + + ++ YA+ G I+ A ++F + P+++VF WT
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 395 LIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDF 454
++ N E A E + +K E N+V++ A+L+ ++ +EL F
Sbjct: 287 MVSGYIQNRMVEEARELF----DKMPERNEVSWNAMLAGYVQGERMEMAKEL-------F 335
Query: 455 DLEP--RMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGE 512
D+ P + + M+ + G + EA MP +PV W ++A +
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIA---GYSQSGHSF 391
Query: 513 ESLKNLVTLEPMHSGDYILLSDIYASAGRCED--ALRVMNQMREQGIK 558
E+L+ V +E G + S ++ C D AL + Q+ + +K
Sbjct: 392 EALRLFVQME--REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 437
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 137/333 (41%), Gaps = 58/333 (17%)
Query: 254 NGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHD 313
+ ++K + Y + G ++A R+F++M V+++ MISGY + + A +F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 314 MQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGL 373
M ++V V + + GK L+ + E + ++ YA+ G
Sbjct: 121 MPERDLVSWNVMIKGYVR------NRNLGKARELF--EIMPERDVCSWNTMLSGYAQNGC 172
Query: 374 IENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETY-----------------YIMR 416
+++A VF +MP KN W L+ N + E A + ++ +
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 417 EKNIEPND----------VAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRME--HYG 464
+K +E V++ +++ + G +DE R+L FD P + +
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL-------FDESPVQDVFTWT 285
Query: 465 CMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESL-----KNLV 519
MV + +VEEA + MP N V W +LA + +++ +E +N+
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 520 TLEPMHSGDYILLSDIYASAGRCEDALRVMNQM 552
T M +G YA G+ +A + ++M
Sbjct: 345 TWNTMITG--------YAQCGKISEAKNLFDKM 369
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q+H L+K + + LL + +++ A +F ++ D ++N MI ++
Sbjct: 430 QLHGRLVKGGYETGCFVGNALL---LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQ 142
+ A+ +++M + ++PD T L ACS +++G Q
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/658 (36%), Positives = 372/658 (56%), Gaps = 3/658 (0%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q+HA+ K F N I LL A ++ AL F + + +N+M+ A+
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYA---KCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
L + + +++ M + P+++T+ LK C R+ LE GEQIH+QI+K+ F
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG 217
V + LI +YA G++D A + R + +DV SW +M +GY + + + F +M D G
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 218 VKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKAR 277
++ DEV L N + AC L ++ G I + ++ A+V +Y++CG ++++
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 278 RLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLG 337
FEQ D +AW+A++SG+ Q+ +EAL VF M + N T S + +
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 338 ALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQ 397
++ GK VH + K + + AL+ YAKCG I +A + F ++ KN W +I
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 398 CLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLE 457
+ +G G AL+++ M N+ PN V + VLSACSH+G+VD+G F SM+ ++ L
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 458 PRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKN 517
P+ EHY C+VD+L RAGL+ A +FI+ MPI P+ ++WRTLL+AC HKN+++GE + +
Sbjct: 827 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 886
Query: 518 LVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLA 577
L+ LEP S Y+LLS++YA + + + +M+E+G+KK PG S IE+ I+ F
Sbjct: 887 LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 946
Query: 578 EDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGL 637
D P E+++ +++ KR GYV + + + + K+ + HSEKLAI+FGL
Sbjct: 947 GDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGL 1006
Query: 638 IRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
+ I + KNLRVC DCH K +SKV NREI+VRD RFHHF+ G+CSC DYW
Sbjct: 1007 LSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 230/471 (48%), Gaps = 7/471 (1%)
Query: 71 MDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKA 130
+D A +F + D S++ MI + + EA+ L+ M + P + F+ L A
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 131 CSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSW 190
C +I +LE GEQ+H +LK GF V N L+ LY + G + A +F MS RD ++
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 191 NSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEE 250
N++ +G + + ++LF M G++ D TL ++++AC + G + Y +
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 251 KELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGV 310
N K+ A++++YAKC ++ A F + +++VV W+ M+ Y + + +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 311 FHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAK 370
F MQ+ +VPN+ T S+L C LG LE G+ +H + K +L + + L+D YAK
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 371 CGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAV 430
G ++ A ++ + K+V WT +I ++AL T+ M ++ I ++V
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 431 LSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPP 490
+SAC+ + + EG+++ + +V + R G +EE+Y +
Sbjct: 598 VSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 491 NPVIWRTLLAACRAHKNVKVGEESLKNLVTL--EPMHSGDYILLSDIYASA 539
N + W L++ + N EE+L+ V + E + + ++ S + A++
Sbjct: 657 N-IAWNALVSGFQQSGN---NEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 229/497 (46%), Gaps = 13/497 (2%)
Query: 26 IVQQCKTTKDLN---QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKIN 82
++ CK + L Q+H ++K F + + L+ ++ + A IF ++
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV---SLYFHLGNLISAEHIFSNMS 350
Query: 83 EPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQ 142
+ D+ YN +I + ++A+ L+K M + +EPD T A + ACS L G+Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 143 IHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTEC 202
+HA K GF + L++LYA C I+ A F +V WN M Y +
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 203 WREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTA 262
R +F +M+ + ++ T ++L C RL D+ELG I + + N + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 263 VVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPN 322
++DMYAK G +D A + + KDVV+W+ MI+GY+Q +AL F M + +
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 323 EVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFK 382
EV + + +S CA L AL+ G+ +H + AL+ Y++CG IE + F+
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 383 KMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDE 442
+ + W L+ +G E AL + M + I+ N+ F + + A S + +
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 443 GRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEA-YQFIKNMPIPPNPVIWRTLLAA 501
G+++ +++ + E ++ + + G + +A QF++ N V W ++ A
Sbjct: 711 GKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLE--VSTKNEVSWNAIINA 767
Query: 502 CRAHKNVKVGEESLKNL 518
H G E+L +
Sbjct: 768 YSKH---GFGSEALDSF 781
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 244/493 (49%), Gaps = 22/493 (4%)
Query: 21 NPKTL--IVQQC-KTTKDLNQ---VHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYA 74
N +TL +++ C KT L++ +H+ ++K N +SE L + + + A
Sbjct: 83 NHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFD---FYLFKGDLYGA 139
Query: 75 LSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKAC-SR 133
+F ++ E +N MI+ + E L+ M+ +V P+ TF+ L+AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 134 IRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSM 193
A + EQIHA+IL G +V N LI LY+ G +D+AR++FD + +D SW +M
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 194 FSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKEL 253
SG K EC E + LF +M LG+ +VL AC ++ +E+G + + +
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 254 NGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHD 313
+ + + A+V +Y G++ A +F M+ +D V ++ +I+G SQ ++A+ +F
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 314 MQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGL 373
M + + P+ T+ S++ C+ G L G+ +H Y K + AL++ YAKC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 374 IENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIE---PNDVAFIAV 430
IE A++ F + ++NV W V+ L + G + ++ I R+ IE PN + ++
Sbjct: 440 IETALDYFLETEVENVVLWNVM---LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 431 LSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGC--MVDILGRAGLVEEAYQFIKNMPI 488
L C +G ++ G ++ S+ ++ Y C ++D+ + G ++ A+ +
Sbjct: 497 LKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA- 552
Query: 489 PPNPVIWRTLLAA 501
+ V W T++A
Sbjct: 553 GKDVVSWTTMIAG 565
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/623 (38%), Positives = 348/623 (55%), Gaps = 4/623 (0%)
Query: 74 ALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNS-VEPDRFTFACTLKACS 132
A +F ++ E D+ +N MI + + E++ +++ ++ S D T L A +
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 133 RIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNS 192
++ L G QIH+ K+G V I LY+ CG+I + +F D+ ++N+
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 193 MFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKE 252
M GY + LF E+ G + TL++++ G L I I Y +
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSN 349
Query: 253 LNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFH 312
+ + TA+ +Y+K ++ AR+LF++ K + +W+AMISGY+Q ++A+ +F
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 313 DMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCG 372
+MQ + PN VT+ +LS CA LGAL GKWVH V+ E +I + TAL+ YAKCG
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 373 LIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLS 432
I A +F M KN W +I +GQG+ AL +Y M I P V F+ VL
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLY 529
Query: 433 ACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNP 492
ACSH G+V EG E+F SM + EP ++HY CMVDILGRAG ++ A QFI+ M I P
Sbjct: 530 ACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGS 589
Query: 493 VIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQM 552
+W TLL ACR HK+ + + L L+P + G ++LLS+I+++ A V
Sbjct: 590 SVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTA 649
Query: 553 REQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADAR 612
+++ + K PG +LIE+ + F + D P KE+Y+ E + +++ AGY P T A
Sbjct: 650 KKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELAL 709
Query: 613 LDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNRE 672
D EE+++E V HSE+LAIAFGLI PGT IRI KNLRVC DCH TK+ISK+ R
Sbjct: 710 HDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERV 769
Query: 673 IVVRDRTRFHHFKEGSCSCNDYW 695
IVVRD RFHHFK+G CSC DYW
Sbjct: 770 IVVRDANRFHHFKDGVCSCGDYW 792
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 4/249 (1%)
Query: 39 VHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFTL 98
+H + +KS F + ++S L + L ++ A +F + E ++N MI +T
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKL---NEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 99 KQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLV 158
++A+ L++ M ++ P+ T C L AC+++ AL G+ +H + + F V
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 159 TNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGV 218
+ LI +YA CG I AR++FD M+ ++ +WN+M SGY +E +++F EM + G+
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 219 KFDEVTLINVLMACGRLADIELGGWISEYMEEK-ELNGNVKLMTAVVDMYAKCGHVDKAR 277
VT + VL AC ++ G I M + +VK +VD+ + GH+ +A
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 278 RLFEQMNIK 286
+ E M+I+
Sbjct: 578 QFIEAMSIE 586
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/712 (35%), Positives = 385/712 (54%), Gaps = 57/712 (8%)
Query: 5 LHFPA-------KTVTTITQF------PENPKTLIVQQCKTTKD---LNQVHAHLIKSRF 48
LHFP K +++ + P+ L+ Q T D L VH+ +I
Sbjct: 11 LHFPKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDL 70
Query: 49 HLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVML 108
N ++ L+ A A L + A +F +I E + N+MIR++ E V +
Sbjct: 71 RCNSSLGVKLMRAYASLKDVAS---ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKV 127
Query: 109 YKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYAN 168
+ TM +V PD +TF C LKACS + G +IH K G V N L+ +Y
Sbjct: 128 FGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGK 187
Query: 169 CGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINV 228
CG + AR + D MS RDV SWNS+ GY + + + + +++ EM + + D T+ ++
Sbjct: 188 CGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 229 LMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDV 288
L A +S E NV MY K +F +M K +
Sbjct: 248 LPA------------VSNTTTE-----NV--------MYVK--------DMFFKMGKKSL 274
Query: 289 VAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLY 348
V+W+ MI Y + EA+ ++ M+ P+ V++ SVL C AL GK +H Y
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 349 VKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERA 408
+++K++ + L AL+D YAKCG +E A +VF+ M ++V WT +I +G+G A
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 409 LETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVD 468
+ + +++ + P+ +AF+ L+ACSH G+++EGR F M+ + + PR+EH CMVD
Sbjct: 395 VALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 454
Query: 469 ILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGD 528
+LGRAG V+EAY+FI++M + PN +W LL ACR H + +G + L L P SG
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Query: 529 YILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEV 588
Y+LLS+IYA AGR E+ + N M+ +G+KK PG S +E++ I+ FL D P E+
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 589 YDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRA-----SPG 643
Y + ++K++K GYVP++ A D EE+DKE +A HSEKLAI F L+
Sbjct: 575 YRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSN 634
Query: 644 TTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
TIRI+KNLR+C DCH A K+IS++ +REI++RD RFH F+ G CSC DYW
Sbjct: 635 NTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/569 (40%), Positives = 351/569 (61%), Gaps = 7/569 (1%)
Query: 134 IRALEEGEQIHAQILKSGFGCR--QLVTNTLIHLYA--NCGRIDIARKMFDRMSNR-DVF 188
+ ++ + QIHA ++ G +L + + +L + + + A K+F ++ +VF
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF 86
Query: 189 SWNSMFSGYVKTECWREIVDLFNEMRDLG-VKFDEVTLINVLMACGRLADIELGGWISEY 247
WN++ GY + L+ EMR G V+ D T ++ A +AD+ LG I
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146
Query: 248 MEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEA 307
+ + + +++ +YA CG V A ++F++M KD+VAW+++I+G+++ + +EA
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 308 LGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDF 367
L ++ +M + P+ T+VS+LS CA +GAL GK VH+Y+ K + + L+D
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 368 YAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETY-YIMREKNIEPNDVA 426
YA+CG +E A +F +M KN WT LI LA NG G+ A+E + Y+ + + P ++
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 427 FIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNM 486
F+ +L ACSH GMV EG E F M ++ +EPR+EH+GCMVD+L RAG V++AY++IK+M
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 487 PIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDAL 546
P+ PN VIWRTLL AC H + + E + ++ LEP HSGDY+LLS++YAS R D
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQ 446
Query: 547 RVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVP 606
++ QM G+KK PG SL+E+ ++EFL D P +Y + M R++S GYVP
Sbjct: 447 KIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVP 506
Query: 607 NTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIIS 666
++ +D EE++KE +V +HSEK+AIAF LI + I + KNLRVC DCH A K++S
Sbjct: 507 QISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 566
Query: 667 KVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
KV+NREIVVRDR+RFHHFK GSCSC DYW
Sbjct: 567 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 219/403 (54%), Gaps = 8/403 (1%)
Query: 36 LNQVHAHLIKSRFHL-NPTISENLLEAAAILIPATTMDYALSIFHKINEP-DSSAYNIMI 93
L Q+HA I+ + + + ++L+ L M YA +F KI +P + +N +I
Sbjct: 33 LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 94 RAFTLKQSPQEAVMLYKTM-LQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGF 152
R + + A LY+ M + VEPD T+ +KA + + + GE IH+ +++SGF
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 153 GCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNE 212
G V N+L+HLYANCG + A K+FD+M +D+ +WNS+ +G+ + E + L+ E
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 213 MRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGH 272
M G+K D T++++L AC ++ + LG + YM + L N+ ++D+YA+CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 273 VDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMA-NVVPNEVTMVSVLS 331
V++A+ LF++M K+ V+W+++I G + KEA+ +F M+ ++P E+T V +L
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 332 CCAVLGALETG-KWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLK-NV 389
C+ G ++ G ++ ++ ++E I ++D A+ G ++ A E K MP++ NV
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 390 FFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLS 432
W L+ A G+ L + ++ +EPN +LS
Sbjct: 393 VIWRTLLG--ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 433
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/673 (37%), Positives = 378/673 (56%), Gaps = 43/673 (6%)
Query: 26 IVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPD 85
++ CK + L Q+H IK + + L+ AI I + + YA + EPD
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISI-SDALPYARRLLLCFPEPD 69
Query: 86 SSAYNIMIRAFTLKQSPQEAVMLYKTMLQNS-VEPDRFTFACTLKACSRIRALEEGEQIH 144
+ +N ++R ++ P +V ++ M++ V PD F+FA +KA R+L G Q+H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 145 AQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWR 204
Q LK G V TLI +Y CG ++ ARK+FD M ++ +WN+ V T C+R
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA-----VITACFR 184
Query: 205 EIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVV 264
N++ FD++ + N + NV L
Sbjct: 185 G-----NDVAGAREIFDKMLVRN------------------------HTSWNVMLAG--- 212
Query: 265 DMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEV 324
Y K G ++ A+R+F +M +D V+WS MI G + E+ F ++Q A + PNEV
Sbjct: 213 --YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEV 270
Query: 325 TMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKM 384
++ VLS C+ G+ E GK +H +V+K +++ AL+D Y++CG + A VF+ M
Sbjct: 271 SLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGM 330
Query: 385 PLKN-VFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEG 443
K + WT +I LA +GQGE A+ + M + P+ ++FI++L ACSH G+++EG
Sbjct: 331 QEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG 390
Query: 444 RELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACR 503
+ F M R + +EP +EHYGCMVD+ GR+G +++AY FI MPIPP ++WRTLL AC
Sbjct: 391 EDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACS 450
Query: 504 AHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGC 563
+H N+++ E+ + L L+P +SGD +LLS+ YA+AG+ +D + M Q IKKT
Sbjct: 451 SHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAW 510
Query: 564 SLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKS-AGYVPNTADARLDAEEDDKEA 622
SL+E+ +Y+F A + E ++ + ++ R+K AGY P A A D EE++KE
Sbjct: 511 SLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKED 570
Query: 623 SVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFH 682
V+ HSEKLA+AF L R S G IRI KNLR+C DCH K+ SKV+ EI+VRDR RFH
Sbjct: 571 QVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFH 630
Query: 683 HFKEGSCSCNDYW 695
FK+GSCSC DYW
Sbjct: 631 SFKDGSCSCRDYW 643
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/715 (34%), Positives = 402/715 (56%), Gaps = 50/715 (6%)
Query: 23 KTLIVQ--QCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATT----MDYALS 76
KTLI + K+ Q+HA I+++ ++S +A+I+I T + AL
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQFIRTQ-----SLSHT---SASIVISIYTNLKLLHEALL 60
Query: 77 IFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRA 136
+F + P A+ +IR FT + +A+ + M + PD F LK+C+ +
Sbjct: 61 LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120
Query: 137 LEEGEQIHAQILKSGFGCRQLVTNTLIHLYA-----------------------NCGR-- 171
L GE +H I++ G C N L+++YA N G
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 172 -----------IDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKF 220
ID R++F+ M +DV S+N++ +GY ++ + + + + EM +K
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 221 DEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLF 280
D TL +VL D+ G I Y+ K ++ +V + +++VDMYAK ++ + R+F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 281 EQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALE 340
++ +D ++W+++++GY Q R EAL +F M A V P V SV+ CA L L
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 341 TGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLA 400
GK +H YV + I + +AL+D Y+KCG I+ A ++F +M + + WT +I A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 401 SNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRM 460
+G G A+ + M+ + ++PN VAF+AVL+ACSHVG+VDE F SM++ + L +
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 461 EHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVT 520
EHY + D+LGRAG +EEAY FI M + P +W TLL++C HKN+++ E+ + + T
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 521 LEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDN 580
++ + G Y+L+ ++YAS GR ++ ++ +MR++G++K P CS IE+ + + F++ D
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 581 MCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRA 640
P ++ + + +M++++ GYV +T+ D +E+ K + HSE+LA+AFG+I
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660
Query: 641 SPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
PGTTIR++KN+R+CTDCH A K ISK+ REI+VRD +RFHHF G+CSC DYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/651 (35%), Positives = 363/651 (55%), Gaps = 31/651 (4%)
Query: 76 SIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQN-SVEPDRFTFACTLKACSRI 134
S F K+ + D +N++I ++L AV Y TM+++ S R T LK S
Sbjct: 93 STFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSN 152
Query: 135 RALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNR--------- 185
+ G+QIH Q++K GF LV + L+++YAN G I A+K+F + +R
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212
Query: 186 ---------------------DVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVT 224
D SW +M G + +E ++ F EM+ G+K D+
Sbjct: 213 GGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 225 LINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMN 284
+VL ACG L I G I + ++ + +A++DMY KC + A+ +F++M
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 285 IKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKW 344
K+VV+W+AM+ GY Q R +EA+ +F DMQ + + P+ T+ +S CA + +LE G
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 345 VHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQ 404
H + +T+ +L+ Y KCG I+++ +F +M +++ WT ++ A G+
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 405 GERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYG 464
++ + M + ++P+ V V+SACS G+V++G+ F M+ ++ + P + HY
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 465 CMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPM 524
CM+D+ R+G +EEA +FI MP PP+ + W TLL+ACR N+++G+ + ++L+ L+P
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH 572
Query: 525 HSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPH 584
H Y LLS IYAS G+ + ++ MRE+ +KK PG S I+ G+++ F A+D P+
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPY 632
Query: 585 FKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGT 644
++Y E + +I GY P+T+ D EE K + +HSE+LAIAFGLI G
Sbjct: 633 LDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQ 692
Query: 645 TIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
IR+ KNLRVC DCHNATK IS V REI+VRD RFH FK+G+CSC D+W
Sbjct: 693 PIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 178/344 (51%), Gaps = 3/344 (0%)
Query: 65 LIPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTF 124
L+ ++ AL +F + E DS ++ MI+ +EA+ ++ M ++ D++ F
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 125 ACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSN 184
L AC + A+ EG+QIHA I+++ F V + LI +Y C + A+ +FDRM
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 185 RDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWI 244
++V SW +M GY +T E V +F +M+ G+ D TL + AC ++ +E G
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 245 SEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRC 304
L V + ++V +Y KCG +D + RLF +MN++D V+W+AM+S Y+Q R
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 305 KEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETG-KWVHLYVKKKRMELTITLGTA 363
E + +F M + P+ VT+ V+S C+ G +E G ++ L + + +I +
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 364 LMDFYAKCGLIENAVEVFKKMPL-KNVFFWTVLIQCLASNGQGE 406
++D +++ G +E A+ MP + WT L+ + G E
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 173/380 (45%), Gaps = 54/380 (14%)
Query: 20 ENPKTLIVQQCKTTKDLN---QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALS 76
+ P ++ C +N Q+HA +I++ F + + L++ + + YA +
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID---MYCKCKCLHYAKT 326
Query: 77 IFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRA 136
+F ++ + + ++ M+ + +EAV ++ M ++ ++PD +T + AC+ + +
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 137 LEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSG 196
LEEG Q H + + SG V+N+L+ LY CG ID + ++F+ M+ RD SW +M S
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 197 YVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGN 256
Y + E + LF++M G+K D VTL V+ AC R +E G Y
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG---QRYF-------- 495
Query: 257 VKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQM 316
KLMT+ + GH +S MI +S++ R +EA+ + M
Sbjct: 496 -KLMTSEYGIVPSIGH------------------YSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 317 ANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLG-------TALMDFYA 369
P+ + ++LS C G LE GKW E I L T L YA
Sbjct: 537 P---PDAIGWTTLLSACRNKGNLEIGKWA--------AESLIELDPHHPAGYTLLSSIYA 585
Query: 370 KCGLIENAVEVFKKMPLKNV 389
G ++ ++ + M KNV
Sbjct: 586 SKGKWDSVAQLRRGMREKNV 605
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/584 (38%), Positives = 356/584 (60%), Gaps = 2/584 (0%)
Query: 113 LQNSVEP-DRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGR 171
L+ S P DR + LK C+ + L +G +HA IL+S F ++ NTL+++YA CG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 172 IDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMA 231
++ ARK+F++M RD +W ++ SGY + + + + FN+M G +E TL +V+ A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 232 CGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAW 291
G + + + + NV + +A++D+Y + G +D A+ +F+ + ++ V+W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 292 SAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKK 351
+A+I+G+++ ++AL +F M P+ + S+ C+ G LE GKWVH Y+ K
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 352 KRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALET 411
+L G L+D YAK G I +A ++F ++ ++V W L+ A +G G+ A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 412 YYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILG 471
+ MR I PN+++F++VL+ACSH G++DEG + M +D + P HY +VD+LG
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 472 RAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYIL 531
RAG + A +FI+ MPI P IW+ LL ACR HKN ++G + +++ L+P G +++
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 532 LSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDA 591
L +IYAS GR DA RV +M+E G+KK P CS +E++ I+ F+A D P +E+
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529
Query: 592 TENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKN 651
E ++ +IK GYVP+T+ + ++ ++E ++ +HSEK+A+AF L+ PG+TI I KN
Sbjct: 530 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 589
Query: 652 LRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
+RVC DCH A K+ SKV REI+VRD RFHHFK+G+CSC DYW
Sbjct: 590 IRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 202/407 (49%), Gaps = 17/407 (4%)
Query: 26 IVQQCKTTKDLNQ---VHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKIN 82
++++C K L Q VHAH+++S F + + LL A +++ A +F K+
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA---KCGSLEEARKVFEKMP 122
Query: 83 EPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQ 142
+ D + +I ++ P +A++ + ML+ P+ FT + +KA + R G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 143 IHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTEC 202
+H +K GF V + L+ LY G +D A+ +FD + +R+ SWN++ +G+ +
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 203 WREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLM-- 260
+ ++LF M G + + ++ AC +E G W+ YM + KL+
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM----IKSGEKLVAF 298
Query: 261 --TAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMAN 318
++DMYAK G + AR++F+++ +DVV+W+++++ Y+Q KEA+ F +M+
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 319 VVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAV 378
+ PNE++ +SVL+ C+ G L+ G + +KK + ++D + G + A+
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 379 EVFKKMPLK-NVFFWTVLIQCLASNGQGERALETYYIMREKNIEPND 424
++MP++ W L+ + E L Y ++P+D
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTE--LGAYAAEHVFELDPDD 463
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/570 (39%), Positives = 359/570 (62%), Gaps = 9/570 (1%)
Query: 132 SRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANC---GRIDIARKMFDRMSNRDVF 188
S+ +L E QI A +KS V LI+ + AR +F+ MS D+
Sbjct: 37 SKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIV 95
Query: 189 SWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYM 248
+NSM GY + E+ LF E+ + G+ D T ++L AC +E G +
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLS 155
Query: 249 EEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEAL 308
+ L+ NV + +++MY +C VD AR +F+++ VV ++AMI+GY++ R EAL
Sbjct: 156 MKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEAL 215
Query: 309 GVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFY 368
+F +MQ + PNE+T++SVLS CA+LG+L+ GKW+H Y KK + + TAL+D +
Sbjct: 216 SLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMF 275
Query: 369 AKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFI 428
AKCG +++AV +F+KM K+ W+ +I A++G+ E+++ + MR +N++P+++ F+
Sbjct: 276 AKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFL 335
Query: 429 AVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPI 488
+L+ACSH G V+EGR+ F M F + P ++HYG MVD+L RAG +E+AY+FI +PI
Sbjct: 336 GLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPI 395
Query: 489 PPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCE--DAL 546
P P++WR LLAAC +H N+ + E+ + + L+ H GDY++LS++YA + E D+L
Sbjct: 396 SPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSL 455
Query: 547 RVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVP 606
R + M+++ K PGCS IE++ ++EF + D + +++ A + M+K +K +GYVP
Sbjct: 456 RKV--MKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVP 513
Query: 607 NTA-DARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKII 665
+T+ + + +KE ++ +HSEKLAI FGL+ PGTTIR+ KNLRVC DCHNA K+I
Sbjct: 514 DTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLI 573
Query: 666 SKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
S +F R++V+RD RFHHF++G CSC D+W
Sbjct: 574 SLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 235 bits (600), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 225/408 (55%), Gaps = 9/408 (2%)
Query: 3 LTLHFPAKTVTTITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAA 62
T H TV T +NP L++ +C + ++L Q+ A+ IKS + + L+
Sbjct: 18 FTKHSKIDTVNT-----QNP-ILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFC 70
Query: 63 AILIPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRF 122
++M YA +F ++EPD +N M R ++ +P E L+ +L++ + PD +
Sbjct: 71 TESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNY 130
Query: 123 TFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRM 182
TF LKAC+ +ALEEG Q+H +K G V TLI++Y C +D AR +FDR+
Sbjct: 131 TFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 183 SNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGG 242
V +N+M +GY + E + LF EM+ +K +E+TL++VL +C L ++LG
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 243 WISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQAR 302
WI +Y ++ VK+ TA++DM+AKCG +D A +FE+M KD AWSAMI Y+
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310
Query: 303 RCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETG-KWVHLYVKKKRMELTITLG 361
+ ++++ +F M+ NV P+E+T + +L+ C+ G +E G K+ V K + +I
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370
Query: 362 TALMDFYAKCGLIENAVEVFKKMPLKNV-FFWTVLIQCLASNGQGERA 408
+++D ++ G +E+A E K+P+ W +L+ +S+ + A
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/660 (36%), Positives = 377/660 (57%), Gaps = 5/660 (0%)
Query: 37 NQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAF 96
QVH +K L T+S +L+ L +A ++F ++E D ++N +I
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKL---RKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 97 TLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRI-RALEEGEQIHAQILKSGFGCR 155
EAV L+ +L+ ++PD++T LKA S + L +Q+H +K
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 156 QLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRD 215
V+ LI Y+ + A +F+R N D+ +WN+M +GY ++ + + LF M
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 216 LGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDK 275
G + D+ TL V CG L I G + Y + + ++ + + ++DMY KCG +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 276 ARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAV 335
A+ F+ + + D VAW+ MISG + + A VF M++ V+P+E T+ ++ +
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 336 LGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVL 395
L ALE G+ +H K +GT+L+D YAKCG I++A +FK++ + N+ W +
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 396 IQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFD 455
+ LA +G+G+ L+ + M+ I+P+ V FI VLSACSH G+V E + SM D+
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 456 LEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESL 515
++P +EHY C+ D LGRAGLV++A I++M + + ++RTLLAACR + + G+
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 516 KNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEF 575
L+ LEP+ S Y+LLS++YA+A + ++ M+ +KK PG S IE+ +I+ F
Sbjct: 811 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIF 870
Query: 576 LAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAF 635
+ +D + +Y ++M++ IK GYVP T +D EE++KE ++ +HSEKLA+AF
Sbjct: 871 VVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAF 930
Query: 636 GLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
GL+ P T IR+ KNLRVC DCHNA K I+KV+NREIV+RD RFH FK+G CSC DYW
Sbjct: 931 GLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 220/438 (50%), Gaps = 14/438 (3%)
Query: 86 SSAYNIMIRAFTLKQ---SPQEAVML--YKTMLQNSVEPDRFTFACTLKACSRIRALEEG 140
SS I+ R L + S Q + +L + M+++ VE D+ TF L ++ +L G
Sbjct: 275 SSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALG 334
Query: 141 EQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKT 200
+Q+H LK G V+N+LI++Y + AR +FD MS RD+ SWNS+ +G +
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 201 ECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLAD-IELGGWISEYMEEKELNGNVKL 259
E V LF ++ G+K D+ T+ +VL A L + + L + + + + +
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 260 MTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANV 319
TA++D Y++ + +A LFE+ N D+VAW+AM++GY+Q+ + L +F M
Sbjct: 455 STALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE 513
Query: 320 VPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVE 379
++ T+ +V C L A+ GK VH Y K +L + + + ++D Y KCG + A
Sbjct: 514 RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 573
Query: 380 VFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGM 439
F +P+ + WT +I NG+ ERA + MR + P++ + A S +
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 440 VDEGRELFV-SMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTL 498
+++GR++ ++ + +P + +VD+ + G +++AY K + + N W +
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAM 690
Query: 499 LAACRAHKNVKVGEESLK 516
L H G+E+L+
Sbjct: 691 LVGLAQHGE---GKETLQ 705
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 163/373 (43%), Gaps = 37/373 (9%)
Query: 70 TMDYALSIFHKINEPDSSAYNIMIRAFT-----LKQSPQEAVMLYKTMLQNSVEPDRFTF 124
++ YA +F K+ + D ++N ++ A+ + ++ Q+A +L++ + Q+ V R T
Sbjct: 89 SLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTL 148
Query: 125 ACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSN 184
+ LK C + E H K G + V L+++Y G++ + +F+ M
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
Query: 185 RDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWI 244
RDV WN M Y++ E +DL + G+ +E+TL + G +D G +
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQV 265
Query: 245 SEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRC 304
+ NGN + ++ +++ + +S Y + +
Sbjct: 266 KSFA-----NGN------------------------DASSVSEIIFRNKGLSEYLHSGQY 296
Query: 305 KEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTAL 364
L F DM ++V ++VT + +L+ + +L G+ VH K ++L +T+ +L
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 365 MDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPND 424
++ Y K A VF M +++ W +I +A NG A+ + + ++P+
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 425 VAFIAVLSACSHV 437
+VL A S +
Sbjct: 417 YTMTSVLKAASSL 429
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 199/439 (45%), Gaps = 43/439 (9%)
Query: 77 IFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRA 136
+F ++ D +N+M++A+ +EA+ L + + P+ T R+ A
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL--------RLLA 253
Query: 137 LEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSG 196
G+ A +KS +AN D S ++ N S
Sbjct: 254 RISGDDSDAGQVKS---------------FANGN---------DASSVSEIIFRNKGLSE 289
Query: 197 YVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGN 256
Y+ + + ++ F +M + V+ D+VT I +L ++ + LG + + L+
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 257 VKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQM 316
+ + ++++MY K AR +F+ M+ +D+++W+++I+G +Q EA+ +F +
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 317 ANVVPNEVTMVSVLSCCAVLG-ALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIE 375
+ P++ TM SVL + L L K VH++ K + TAL+D Y++ ++
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 376 NAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACS 435
A +F++ ++ W ++ + G + L+ + +M ++ +D V C
Sbjct: 470 EAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 436 HVGMVDEGRELFV-SMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVI 494
+ +++G+++ ++ +DL+ + ++D+ + G + A ++P+ P+ V
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVA 585
Query: 495 WRTLLAACRAHKNVKVGEE 513
W T+++ C ++ GEE
Sbjct: 586 WTTMISGC-----IENGEE 599
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 140 GEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVK 199
G+ HA+IL + + N LI +Y+ CG + AR++FD+M +RD+ SWNS+ + Y +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 200 -TECWREIVD----LFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISE----YMEE 250
+EC E + LF +R V +TL +L C + W SE Y +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV----WASESFHGYACK 173
Query: 251 KELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGV 310
L+G+ + A+V++Y K G V + + LFE+M +DVV W+ M+ Y + +EA+ +
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 311 FHDMQMANVVPNEVTM 326
+ + PNE+T+
Sbjct: 234 SSAFHSSGLNPNEITL 249
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 236 ADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMI 295
+D+ LG + E N L+ ++ MY+KCG + ARR+F++M +D+V+W++++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 296 SGYSQARRC-----KEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVK 350
+ Y+Q+ C ++A +F ++ V + +T+ +L C G + + H Y
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 351 KKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALE 410
K ++ + AL++ Y K G ++ +F++MP ++V W ++++ G E A++
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 411 TYYIMREKNIEPNDVAF 427
+ PN++
Sbjct: 233 LSSAFHSSGLNPNEITL 249
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/594 (39%), Positives = 350/594 (58%), Gaps = 35/594 (5%)
Query: 137 LEEGEQIHAQILKSGFGCRQLVTNTLIHLYA--NCGRIDIARKMFDRMSNRDVFSWNSMF 194
+E QIHA++ G + + A + +D A ++ DR +F+ NSM
Sbjct: 19 FKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 195 SGYVKTECWREIVDLFNEMRDLG--VKFDEVTLINVLMACGRLADIELG----------- 241
+ K+ + D + + G +K D T+ ++ AC L E G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 242 ---------GWISEYMEEKELNGNVKLM-----------TAVVDMYAKCGHVDKARRLFE 281
G IS Y E L+ K+ TA+V A+CG V AR+LFE
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 282 QMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALET 341
M +D +AW+AMISGY+Q +EAL VFH MQ+ V N V M+SVLS C LGAL+
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 342 GKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLAS 401
G+W H Y+++ ++++T+ L T L+D YAKCG +E A+EVF M KNV+ W+ + LA
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 402 NGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRME 461
NG GE+ LE + +M++ + PN V F++VL CS VG VDEG+ F SM +F +EP++E
Sbjct: 319 NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLE 378
Query: 462 HYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTL 521
HYGC+VD+ RAG +E+A I+ MP+ P+ +W +LL A R +KN+++G + K ++ L
Sbjct: 379 HYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438
Query: 522 EPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNM 581
E + G Y+LLS+IYA + ++ V M+ +G++K PGCS++E++GE++EF D
Sbjct: 439 ETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKS 498
Query: 582 CPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRAS 641
P + ++ +++ +R++ AGY +T D +E++KE ++ HSEK AIAFG++
Sbjct: 499 HPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLK 558
Query: 642 PGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
IRI KNLRVC DCH + +ISK+FNREI+VRDR RFHHFK+G CSCN +W
Sbjct: 559 EDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 214/425 (50%), Gaps = 50/425 (11%)
Query: 15 ITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEA----AAILIPATT 70
+++ ++P ++ T K++ Q+HA L +++ T+ ++ L A L
Sbjct: 1 MSRIGKHPAIALLDSGITFKEVRQIHAKL-----YVDGTLKDDHLVGHFVKAVALSDHKY 55
Query: 71 MDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQ--NSVEPDRFTFACTL 128
+DYA I + +P A N MIRA P+++ Y+ +L N ++PD +T +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 129 KACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLY---------------------- 166
+AC+ +R E G Q+H ++ GF V LI LY
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 167 ---------ANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG 217
A CG + ARK+F+ M RD +WN+M SGY + RE +++F+ M+ G
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 218 VKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKAR 277
VK + V +I+VL AC +L ++ G W Y+E ++ V+L T +VD+YAKCG ++KA
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 278 RLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLG 337
+F M K+V WS+ ++G + ++ L +F M+ V PN VT VSVL C+V+G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 338 ALETGKWVHLYVKKKRMELTITLG----TALMDFYAKCGLIENAVEVFKKMPLK-NVFFW 392
++ G+ + R E I L+D YA+ G +E+AV + ++MP+K + W
Sbjct: 356 FVDEGQ---RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVW 412
Query: 393 TVLIQ 397
+ L+
Sbjct: 413 SSLLH 417
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/692 (35%), Positives = 379/692 (54%), Gaps = 68/692 (9%)
Query: 71 MDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKA 130
MD F ++ + DS ++ MI + +A+ + M++ +EP +FT L +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 131 CSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCG-------------------- 170
+ R +E G+++H+ I+K G V+N+L+++YA CG
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 171 -----------RIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEM-RDLGV 218
++D+A F++M+ RD+ +WNSM SG+ + +D+F++M RD +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 219 KFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARR 278
D TL +VL AC L + +G I ++ + + ++ A++ MY++CG V+ ARR
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 279 LFEQMNIKD---------------------------------VVAWSAMISGYSQARRCK 305
L EQ KD VVAW+AMI GY Q
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 306 EALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALM 365
EA+ +F M PN T+ ++LS + L +L GK +H K ++++ AL+
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 366 DFYAKCGLIENAVEVFKKMPL-KNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPND 424
YAK G I +A F + ++ WT +I LA +G E ALE + M + + P+
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 425 VAFIAVLSACSHVGMVDEGRELFVSMSRDFD-LEPRMEHYGCMVDILGRAGLVEEAYQFI 483
+ ++ V SAC+H G+V++GR+ F M +D D + P + HY CMVD+ GRAGL++EA +FI
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYF-DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 484 KNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCE 543
+ MPI P+ V W +LL+ACR HKN+ +G+ + + L+ LEP +SG Y L+++Y++ G+ E
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 544 DALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAG 603
+A ++ M++ +KK G S IE+ +++ F ED P E+Y + + IK G
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Query: 604 YVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATK 663
YVP+TA D EE+ KE + HHSEKLAIAFGLI TT+RI KNLRVC DCH A K
Sbjct: 695 YVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIK 754
Query: 664 IISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
ISK+ REI+VRD TRFHHFK+G CSC DYW
Sbjct: 755 FISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/560 (23%), Positives = 222/560 (39%), Gaps = 120/560 (21%)
Query: 112 MLQNSVEPDRFTFACTLKACSRIRA----------------LEEGEQIHAQILKSGFGCR 155
+LQ SV F L C I++ + G +HA+ L R
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 156 QLVT-NTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMR 214
+ NT++ Y+ G +D + FD++ RD SW +M GY + + + + +M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 215 DLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKC---- 270
G++ + TL NVL + +E G + ++ + L GNV + ++++MYAKC
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 271 ---------------------------GHVDKARRLFEQMNIKDVVAWSAMISGYSQARR 303
G +D A FEQM +D+V W++MISG++Q
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 304 CKEALGVFHDMQMANVV-PNEVTMVSVLSCCAVLGALETGKWVHLYV------------- 349
AL +F M +++ P+ T+ SVLS CA L L GK +H ++
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 350 --------------------KKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNV 389
++ +L I TAL+D Y K G + A +F + ++V
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDV 378
Query: 390 FFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGREL--- 446
WT +I +G A+ + M PN A+LS S + + G+++
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Query: 447 -------------------------FVSMSRDFDL---EPRMEHYGCMVDILGRAGLVEE 478
S SR FDL E + M+ L + G EE
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE 498
Query: 479 AYQFIKNM---PIPPNPVIWRTLLAACRAHKNVKVGEES---LKNLVTLEPMHSGDYILL 532
A + + M + P+ + + + +AC V G + +K++ + P S Y +
Sbjct: 499 ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS-HYACM 557
Query: 533 SDIYASAGRCEDALRVMNQM 552
D++ AG ++A + +M
Sbjct: 558 VDLFGRAGLLQEAQEFIEKM 577
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/661 (36%), Positives = 382/661 (57%), Gaps = 10/661 (1%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
QVH ++K+ +S +L+ + + + A +F K +N MI +
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLIN---LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
EA+ ++ +M N V +FA +K C+ ++ L EQ+H ++K GF Q
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMS-NRDVFSWNSMFSGYVKTECWREIVDLFNEMRDL 216
+ L+ Y+ C + A ++F + +V SW +M SG+++ + E VDLF+EM+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 217 GVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKA 276
GV+ +E T +L A ++ E+ + + E+ + + TA++D Y K G V++A
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER----SSTVGTALLDAYVKLGKVEEA 447
Query: 277 RRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVL 336
++F ++ KD+VAWSAM++GY+Q + A+ +F ++ + PNE T S+L+ CA
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 337 GA-LETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVL 395
A + GK H + K R++ ++ + +AL+ YAK G IE+A EVFK+ K++ W +
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 396 IQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFD 455
I A +GQ +AL+ + M+++ ++ + V FI V +AC+H G+V+EG + F M RD
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 456 LEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESL 515
+ P EH CMVD+ RAG +E+A + I+NMP P IWRT+LAACR HK ++G +
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 516 KNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEF 575
+ ++ ++P S Y+LLS++YA +G ++ +V M E+ +KK PG S IE+ + Y F
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSF 747
Query: 576 LAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAF 635
LA D P ++Y E++ R+K GY P+T+ D +++ KEA +A HSE+LAIAF
Sbjct: 748 LAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAF 807
Query: 636 GLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHF-KEGSCSCNDY 694
GLI G+ + I KNLRVC DCH K+I+K+ REIVVRD RFHHF +G CSC D+
Sbjct: 808 GLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
Query: 695 W 695
W
Sbjct: 868 W 868
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 262/558 (46%), Gaps = 56/558 (10%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q+H IK F + ++ +L++ + + +F ++ E + + +I +
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDT---YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
E + L+ M +P+ FTFA L + G Q+H ++K+G
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG 217
V+N+LI+LY CG + AR +FD+ + V +WNSM SGY E + +F MR
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 218 VKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKAR 277
V+ E + +V+ C L ++ + + + + + TA++ Y+KC + A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 278 RLFEQMN-IKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVL 336
RLF+++ + +VV+W+AMISG+ Q +EA+ +F +M+ V PNE T +L+ V+
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 337 GALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLI 396
E VH V K E + T+GTAL+D Y K G +E A +VF + K++ W+ ++
Sbjct: 411 SPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 397 QCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHV-GMVDEGRELFVSMSRDFD 455
A G+ E A++ + + + I+PN+ F ++L+ C+ + +G++ F
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFA 521
Query: 456 LEPRMEHYGC----MVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAH----KN 507
++ R++ C ++ + + G +E A + K + V W ++++ H K
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKA 580
Query: 508 VKVGEESLKNLVTLEPM----------HSG---------DYIL--------------LSD 534
+ V +E K V ++ + H+G D ++ + D
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 640
Query: 535 IYASAGRCEDALRVMNQM 552
+Y+ AG+ E A++V+ M
Sbjct: 641 LYSRAGQLEKAMKVIENM 658
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 241/533 (45%), Gaps = 50/533 (9%)
Query: 66 IPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFA 125
+ ++ + A ++F K D +Y ++ F+ QEA L+ + + +E D F+
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 126 CTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNR 185
LK + + G Q+H Q +K GF V +L+ Y RK+FD M R
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 186 DVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGG--- 242
+V +W ++ SGY + E++ LF M++ G + + T L G LA+ +GG
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL---GVLAEEGVGGRGL 214
Query: 243 WISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQAR 302
+ + + L+ + + +++++Y KCG+V KAR LF++ +K VV W++MISGY+
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 303 RCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGT 362
EALG+F+ M++ V +E + SV+ CA L L + +H V K + T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 363 ALMDFYAKCGLIENAVEVFKKMP-LKNVFFWTVLIQCLASNGQGERALETYYIMREKNIE 421
ALM Y+KC + +A+ +FK++ + NV WT +I N E A++ + M+ K +
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 422 PNDVAF-------------------------------IAVLSACSHVGMVDEGRELFVSM 450
PN+ + A+L A +G V+E ++F +
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 451 SRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMP---IPPNPVIWRTLLAACRAHKN 507
D D+ + M+ + G E A + + I PN + ++L C A N
Sbjct: 455 D-DKDIVA----WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC-AATN 508
Query: 508 VKVGEESLKNLVTLEPMHSGDYILLS---DIYASAGRCEDALRVMNQMREQGI 557
+G+ + ++ + S +YA G E A V + RE+ +
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/590 (37%), Positives = 348/590 (58%), Gaps = 6/590 (1%)
Query: 112 MLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGR 171
+L P + T+ + C +L + ++H IL +G + LI +Y++ G
Sbjct: 68 VLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS 127
Query: 172 IDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMA 231
+D ARK+FD+ R ++ WN++F E++ L+ +M +GV+ D T VL A
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 232 C----GRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKD 287
C + + G I ++ + + +V +MT +VDMYA+ G VD A +F M +++
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 288 VVAWSAMISGYSQARRCKEALGVFHDM--QMANVVPNEVTMVSVLSCCAVLGALETGKWV 345
VV+WSAMI+ Y++ + EAL F +M + + PN VTMVSVL CA L ALE GK +
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 346 HLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQG 405
H Y+ ++ ++ + + +AL+ Y +CG +E VF +M ++V W LI +G G
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 406 ERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGC 465
++A++ + M P V F++VL ACSH G+V+EG+ LF +M RD ++P++EHY C
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 466 MVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMH 525
MVD+LGRA ++EA + +++M P P +W +LL +CR H NV++ E + + L LEP +
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Query: 526 SGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHF 585
+G+Y+LL+DIYA A ++ RV + +G++K PG +E+ ++Y F++ D P
Sbjct: 488 AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLM 547
Query: 586 KEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTT 645
++++ + + +K GY+P T + E ++KE V HSEKLA+AFGLI S G
Sbjct: 548 EQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEP 607
Query: 646 IRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
IRI+KNLR+C DCH TK ISK +EI+VRD RFH FK G CSC DYW
Sbjct: 608 IRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 173/320 (54%), Gaps = 13/320 (4%)
Query: 32 TTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNI 91
+ D +VH H++ + +P ++ L+ + L ++DYA +F K + +N
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL---GSVDYARKVFDKTRKRTIYVWNA 148
Query: 92 MIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKAC----SRIRALEEGEQIHAQI 147
+ RA TL +E + LY M + VE DRFT+ LKAC + L +G++IHA +
Sbjct: 149 LFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL 208
Query: 148 LKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKT----ECW 203
+ G+ + TL+ +YA G +D A +F M R+V SW++M + Y K E
Sbjct: 209 TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 204 REIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAV 263
R ++ E +D + VT+++VL AC LA +E G I Y+ + L+ + +++A+
Sbjct: 269 RTFREMMRETKDSSP--NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 264 VDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNE 323
V MY +CG ++ +R+F++M+ +DVV+W+++IS Y K+A+ +F +M P
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 324 VTMVSVLSCCAVLGALETGK 343
VT VSVL C+ G +E GK
Sbjct: 387 VTFVSVLGACSHEGLVEEGK 406
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 11/163 (6%)
Query: 26 IVQQCKTTKDLNQ---VHAHLIKSRF-HLNPTISENLLEAAAILIPATTMDYALSIFHKI 81
++Q C + L Q +H ++++ + P IS + ++ +F ++
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISA----LVTMYGRCGKLEVGQRVFDRM 346
Query: 82 NEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGE 141
++ D ++N +I ++ + ++A+ +++ ML N P TF L ACS +EEG+
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 142 QIHAQILKSGFGCRQLVTN--TLIHLYANCGRIDIARKMFDRM 182
++ + + G + + + ++ L R+D A KM M
Sbjct: 407 RLFETMWRD-HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/613 (36%), Positives = 350/613 (57%), Gaps = 10/613 (1%)
Query: 86 SSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHA 145
S+ +N+ +R + E++ LY++ML++ PD F+F LK+C+ + G+Q+H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 146 QILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFS--WNSMFSGYVKTECW 203
+ K G V LI +Y CG + ARK+F+ S +N++ SGY
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 204 REIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAV 263
+ +F M++ GV D VT++ ++ C + LG + + L+ V ++ +
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 264 VDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNE 323
+ MY KCG V+ RRLF++M +K ++ W+A+ISGYSQ + L ++ M+ + V P+
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 324 VTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKK 383
T+VSVLS CA LGA + G V V+ + + A + YA+CG + A VF
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 384 MPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEG 443
MP+K++ WT +I C +G GE L + M ++ I P+ F+ VLSACSH G+ D+G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 444 RELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACR 503
ELF +M R++ LEP EHY C+VD+LGRAG ++EA +FI++MP+ P+ +W LL AC+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 504 AHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGC 563
HKNV + E + ++ EP + G Y+L+S+IY+ + E R+ MRE+ +K PG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 564 SLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEAS 623
S +E G ++ FLA D +EV+ + + + +D + ++ +S
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA-------GNMDCDRGEEVSS 550
Query: 624 VA-HHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFH 682
HSE+LAIAFG++ + PGT I + KNLRVC DCH K +SK+ +R+ VVRD +RFH
Sbjct: 551 TTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFH 610
Query: 683 HFKEGSCSCNDYW 695
+FK+G CSC DYW
Sbjct: 611 YFKDGVCSCKDYW 623
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 365/644 (56%), Gaps = 36/644 (5%)
Query: 7 FPAKTVTTITQFPENPKTL---IVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAA 63
F A ++TIT+ N + I+ CKTT Q+H+ I NPT + L
Sbjct: 18 FKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWC 77
Query: 64 ILIPATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFT 123
+ + YA +F KI EPD +N MI+ ++ E V LY ML+ V PD T
Sbjct: 78 SRL-GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHT 136
Query: 124 FACTLKACSRIR-ALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRM 182
F L R AL G+++H ++K G G V N L+ +Y+ CG +D+AR +FDR
Sbjct: 137 FPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRR 196
Query: 183 SNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGG 242
DVFSWN M SGY + + + E ++L EM V VTL+ VL AC ++ D +L
Sbjct: 197 CKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCK 256
Query: 243 WISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLF---------------------- 280
+ EY+ E + +++L A+V+ YA CG +D A R+F
Sbjct: 257 RVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERG 316
Query: 281 ---------EQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLS 331
+QM ++D ++W+ MI GY +A E+L +F +MQ A ++P+E TMVSVL+
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 332 CCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFF 391
CA LG+LE G+W+ Y+ K +++ + +G AL+D Y KCG E A +VF M ++ F
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT 436
Query: 392 WTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMS 451
WT ++ LA+NGQG+ A++ ++ M++ +I+P+D+ ++ VLSAC+H GMVD+ R+ F M
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 496
Query: 452 RDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVG 511
D +EP + HYGCMVD+LGRAGLV+EAY+ ++ MP+ PN ++W LL A R H + +
Sbjct: 497 SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMA 556
Query: 512 EESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGE 571
E + K ++ LEP + Y LL +IYA R +D V ++ + IKKTPG SLIE++G
Sbjct: 557 ELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGF 616
Query: 572 IYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDA 615
+EF+A D +E+Y E + + A Y+P+T++ +A
Sbjct: 617 AHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEA 660
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/636 (36%), Positives = 372/636 (58%), Gaps = 13/636 (2%)
Query: 70 TMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLK 129
+ + A +F K++E + + +MI P+EA+ + M+ + E D+FT +
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 130 ACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANC---GRIDIARKMFDRMSNRD 186
AC+ + L G+Q+H+ ++SG V +L+ +YA C G +D RK+FDRM +
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 187 VFSWNSMFSGYVKT-ECWREIVDLFNEMRDLG-VKFDEVTLINVLMACGRLADIELGGWI 244
V SW ++ +GY+K E ++LF+EM G V+ + T + ACG L+D +G +
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 245 SEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRC 304
++ L N + +V+ M+ K ++ A+R FE ++ K++V+++ + G +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 305 KEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTAL 364
++A + ++ + + T S+LS A +G++ G+ +H V K + + AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 365 MDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPND 424
+ Y+KCG I+ A VF M +NV WT +I A +G R LET+ M E+ ++PN+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 425 VAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIK 484
V ++A+LSACSHVG+V EG F SM D ++P+MEHY CMVD+L RAGL+ +A++FI
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 485 NMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCED 544
MP + ++WRT L ACR H N ++G+ + + ++ L+P YI LS+IYA AG+ E+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 545 ALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGY 604
+ + +M+E+ + K GCS IE+ +I++F D P+ ++YD + ++ IK GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 605 VPNTADARLDAEEDDKEAS-----VAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCH 659
VP+T D L E++ + + + HSEK+A+AFGLI S +R+ KNLRVC DCH
Sbjct: 756 VPDT-DLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCH 814
Query: 660 NATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
NA K IS V REIV+RD RFHHFK+G CSCNDYW
Sbjct: 815 NAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/584 (22%), Positives = 255/584 (43%), Gaps = 63/584 (10%)
Query: 26 IVQQCKTTKDL---NQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYA-----LSI 77
+++ C +D VHA LI+ F + P +++L + I + + + D A
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIE--FDIEP---DSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 78 FHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRAL 137
+ + D +++ M+ + +A+ ++ L+ + P+ + + ++ACS +
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 138 EEGEQIHAQILKSG-FGCRQLVTNTLIHLYANC-GRIDIARKMFDRMSNRDVFSWNSMFS 195
G ++K+G F V +LI ++ + A K+FD+MS +V +W M +
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 196 GYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNG 255
++ RE + F +M G + D+ TL +V AC L ++ LG + + L
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 256 NVKLMTAVVDMYAKC---GHVDKARRLFEQMNIKDVVAWSAMISGY-SQARRCKEALGVF 311
+V+ ++VDMYAKC G VD R++F++M V++W+A+I+GY EA+ +F
Sbjct: 303 DVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 312 HDM-QMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAK 370
+M +V PN T S C L GK V K+ + ++ +++ + K
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 371 CGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAV 430
+E+A F+ + KN+ + + N E+A + + E+ + + F ++
Sbjct: 421 SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASL 480
Query: 431 LSACSHVGMVDEGREL------------------FVSM----------SRDFD-LEPR-M 460
LS ++VG + +G ++ +SM SR F+ +E R +
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 461 EHYGCMVDILGRAGL---VEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKN 517
+ M+ + G V E + + + PN V + +L+AC +V + E ++
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC---SHVGLVSEGWRH 597
Query: 518 LVTLEPMHS-----GDYILLSDIYASAGRCEDALRVMNQMREQG 556
++ H Y + D+ AG DA +N M Q
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA 641
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 223/502 (44%), Gaps = 55/502 (10%)
Query: 105 AVMLYKTMLQNSVEP-DRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLI 163
AV M ++ + P D TF+ LK+C R R G+ +HA++++ ++ N+LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 164 HLYANCGRIDIARKMFD---RMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKF 220
LY+ G A +F+ R RDV SW++M + Y + + +F E +LG+
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 221 DEVTLINVLMACGRLADIELGGWISEY-MEEKELNGNVKLMTAVVDMYAKC-GHVDKARR 278
++ V+ AC + +G + M+ +V + +++DM+ K + A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 279 LFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGA 338
+F++M+ +VV W+ MI+ Q +EA+ F DM ++ ++ T+ SV S CA L
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 339 LETGKWVHLYVKKKRMELTITLGTALMDFYAKC---GLIENAVEVFKKMPLKNVFFWTVL 395
L GK +H + R L + +L+D YAKC G +++ +VF +M +V WT L
Sbjct: 285 LSLGKQLHSWA--IRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 396 IQCLASN-GQGERALETYY-IMREKNIEPNDVAFIAVLSACSHVGMVDEGRE-------- 445
I N A+ + ++ + ++EPN F + AC ++ G++
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 446 --------------LFVSMSRDFDLEPRME--------HYGCMVDILGRAGLVEEAYQFI 483
+FV R D + E Y +D R E+A++ +
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 484 KNMP---IPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTL-----EPMHSGDYILLSDI 535
+ + + + +LL+ +++ GE+ +V L +P+ + L +
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA----LISM 518
Query: 536 YASAGRCEDALRVMNQMREQGI 557
Y+ G + A RV N M + +
Sbjct: 519 YSKCGSIDTASRVFNFMENRNV 540
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 157/325 (48%), Gaps = 21/325 (6%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
QV K N +++ +++ ++ + + M+ A F ++E + +YN +
Sbjct: 394 QVLGQAFKRGLASNSSVANSVI---SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
+ ++A L + + + FTFA L + + ++ +GEQIH+Q++K G C Q
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG 217
V N LI +Y+ CG ID A ++F+ M NR+V SW SM +G+ K +++ FN+M + G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 218 VKFDEVTLINVLMACGRLADIELGGW--ISEYMEEKELNGNVKLMTAVVDMYAKCGHVDK 275
VK +EVT + +L AC + + GW + E+ ++ ++ +VD+ + G +
Sbjct: 571 VKPNEVTYVAILSACSHVGLVS-EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 276 ARRLFEQMNIK-DVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNE----VTMVSVL 330
A M + DV+ W + G + E LG ++ + PNE + + ++
Sbjct: 630 AFEFINTMPFQADVLVWRTFL-GACRVHSNTE-LGKLAARKILELDPNEPAAYIQLSNIY 687
Query: 331 SCCAVLGALETGKWVHLYVKKKRME 355
+C GKW +++M+
Sbjct: 688 AC--------AGKWEESTEMRRKMK 704
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 24/285 (8%)
Query: 322 NEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVF 381
+ VT S+L C GK VH + + +E L +L+ Y+K G A +VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 382 KKM---PLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVG 438
+ M ++V W+ ++ C +NG+ A++ + E + PND + AV+ ACS+
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 439 MVDEGRELFVSMSRDFDLEPRMEHYGC-MVDILGRA-GLVEEAYQFIKNMPIPPNPVIWR 496
V GR + + E + GC ++D+ + E AY+ M N V W
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWT 238
Query: 497 TLLAACRAHKNVKVGEESLKNLVTLEPMHSG---DYILLSDIYASAGRCEDALRVMNQMR 553
++ C + E+++ L+ + SG D LS ++++ E+ L + Q+
Sbjct: 239 LMITRC---MQMGFPREAIRFF--LDMVLSGFESDKFTLSSVFSACAELEN-LSLGKQLH 292
Query: 554 E----QGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATEN 594
G+ CSL+++ Y + D ++V+D E+
Sbjct: 293 SWAIRSGLVDDVECSLVDM----YAKCSADGSVDDCRKVFDRMED 333
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/728 (32%), Positives = 383/728 (52%), Gaps = 73/728 (10%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q HA ++KS + IS L+ + + + A + I +P +++ +I A T
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYS---NYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
+ +++ ++ M + + PD K C+ + A + G+QIH SG
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMSNRDVF----------------------------- 188
V ++ H+Y CGR+ ARK+FDRMS++DV
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 189 ------SWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGG 242
SWN + SG+ ++ +E V +F ++ LG D+VT+ +VL + G + +G
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 243 WISEYMEEKELNGNVKLMTAVVDMYAKCGHV----------------------------- 273
I Y+ ++ L + +++A++DMY K GHV
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 274 --DKARRLFE----QMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMV 327
DKA +FE Q +VV+W+++I+G +Q + EAL +F +MQ+A V PN VT+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 328 SVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLK 387
S+L C + AL G+ H + + + + +G+AL+D YAKCG I + VF MP K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 388 NVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELF 447
N+ W L+ + +G+ + + + + ++P+ ++F ++LSAC VG+ DEG + F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 448 VSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKN 507
MS ++ ++PR+EHY CMV++LGRAG ++EAY IK MP P+ +W LL +CR N
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 508 VKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIE 567
V + E + + L LEP + G Y+LLS+IYA+ G + + N+M G+KK PGCS I+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 568 LDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHH 627
+ +Y LA D P ++ + + + K ++ +G+ PN A D EE ++E + H
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGH 692
Query: 628 SEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEG 687
SEKLA+ FGL+ GT +++ KNLR+C DCH K IS REI +RD RFHHFK+G
Sbjct: 693 SEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDG 752
Query: 688 SCSCNDYW 695
CSC D+W
Sbjct: 753 ICSCGDFW 760
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/663 (34%), Positives = 364/663 (54%), Gaps = 6/663 (0%)
Query: 36 LNQVHAHLIKSRFHLNP--TISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMI 93
+ QVHA +K F NP T+S LL++ +D A +F +I E DS +N +I
Sbjct: 166 VGQVHAFAVKLGFDTNPFLTVSNVLLKS---YCEVRRLDLACVLFEEIPEKDSVTFNTLI 222
Query: 94 RAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFG 153
+ E++ L+ M Q+ +P FTF+ LKA + G+Q+HA + +GF
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS 282
Query: 154 CRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEM 213
V N ++ Y+ R+ R +FD M D S+N + S Y + + + + F EM
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 214 RDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHV 273
+ +G +L L+ +++G + + + + ++VDMYAKC
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 274 DKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCC 333
++A +F+ + + V+W+A+ISGY Q L +F M+ +N+ ++ T +VL
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 334 AVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWT 393
A +L GK +H ++ + + G+ L+D YAKCG I++AV+VF++MP +N W
Sbjct: 463 ASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWN 522
Query: 394 VLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRD 453
LI A NG GE A+ + M E ++P+ V+ + VL+ACSH G V++G E F +MS
Sbjct: 523 ALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPI 582
Query: 454 FDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEE 513
+ + P+ +HY CM+D+LGR G EA + + MP P+ ++W ++L ACR HKN + E
Sbjct: 583 YGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAER 642
Query: 514 SLKNLVTLEPMH-SGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEI 572
+ + L ++E + + Y+ +S+IYA+AG E V MRE+GIKK P S +E++ +I
Sbjct: 643 AAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKI 702
Query: 573 YEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLA 632
+ F + D P+ E+ + I+ GY P+T+ D +E K S+ +HSE+LA
Sbjct: 703 HVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLA 762
Query: 633 IAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCN 692
+AF LI G I + KNLR C DCH A K+ISK+ REI VRD +RFHHF EG CSC
Sbjct: 763 VAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCG 822
Query: 693 DYW 695
DYW
Sbjct: 823 DYW 825
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 205/438 (46%), Gaps = 11/438 (2%)
Query: 84 PDSS--AYNIMIRAFTLKQSPQEAVMLYKTMLQNS--VEPDRFTFACTLKACSRIRALEE 139
PD + + I++ + EA L++ M ++S PD TF L C+
Sbjct: 106 PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNA 165
Query: 140 GEQIHAQILKSGFGCRQLVT--NTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGY 197
Q+HA +K GF +T N L+ Y R+D+A +F+ + +D ++N++ +GY
Sbjct: 166 VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 198 VKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNV 257
K + E + LF +MR G + + T VL A L D LG + + +
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDA 285
Query: 258 KLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMA 317
+ ++D Y+K V + R LF++M D V+++ +IS YSQA + + +L F +MQ
Sbjct: 286 SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCM 345
Query: 318 NVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENA 377
++LS A L +L+ G+ +H + + +G +L+D YAKC + E A
Sbjct: 346 GFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEA 405
Query: 378 VEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHV 437
+FK +P + WT LI G L+ + MR N+ + F VL A +
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465
Query: 438 GMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRT 497
+ G++L + R +LE G +VD+ + G +++A Q + MP N V W
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNA 523
Query: 498 LLAACRAHKNVKVGEESL 515
L++ AH + GE ++
Sbjct: 524 LIS---AHADNGDGEAAI 538
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 166/396 (41%), Gaps = 39/396 (9%)
Query: 142 QIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTE 201
++ A+I+K+GF +N ++ G++ ARK++D M +++ S N+M SG+VKT
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 202 CWREIVDLFNEMRDLGV--------------KFDE-------------------VTLINV 228
DLF+ M D V FDE VT +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 229 LMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCG--HVDKARRLFEQMNIK 286
L C G + + + + N L + V + + C +D A LFE++ K
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 287 DVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVH 346
D V ++ +I+GY + E++ +F M+ + P++ T VL L G+ +H
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLH 273
Query: 347 LYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGE 406
++G ++DFY+K + +F +MP + + V+I + Q E
Sbjct: 274 ALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYE 333
Query: 407 RALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYG-C 465
+L + M+ + + F +LS +++ + GR+L + H G
Sbjct: 334 ASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LATADSILHVGNS 391
Query: 466 MVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAA 501
+VD+ + + EEA K++P V W L++
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/629 (35%), Positives = 357/629 (56%), Gaps = 35/629 (5%)
Query: 8 PAKTVTTITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIP 67
P +T + NP ++++CK L Q+ A +I + L+P S L+ A L
Sbjct: 41 PINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCA-LSE 99
Query: 68 ATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSV---EPDRFTF 124
+ +DY++ I I P+ ++N+ IR F+ ++P+E+ +LYK ML++ PD FT+
Sbjct: 100 SRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTY 159
Query: 125 ACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSN 184
K C+ +R G I +LK V N IH++A+CG ++ ARK+FD
Sbjct: 160 PVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPV 219
Query: 185 RDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWI 244
RD+ SWN + +GY K + + ++ M GVK D+VT+I ++ +C L D+ G
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 245 SEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARR-------------------------- 278
EY++E L + L+ A++DM++KCG + +ARR
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLL 339
Query: 279 -----LFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCC 333
LF+ M KDVV W+AMI G QA+R ++AL +F +MQ +N P+E+TM+ LS C
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 334 AVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWT 393
+ LGAL+ G W+H Y++K + L + LGT+L+D YAKCG I A+ VF + +N +T
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYT 459
Query: 394 VLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRD 453
+I LA +G A+ + M + I P+++ FI +LSAC H GM+ GR+ F M
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Query: 454 FDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEE 513
F+L P+++HY MVD+LGRAGL+EEA + +++MP+ + +W LL CR H NV++GE+
Sbjct: 520 FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEK 579
Query: 514 SLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIY 573
+ K L+ L+P SG Y+LL +Y A EDA R M E+G++K PGCS IE++G +
Sbjct: 580 AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVC 639
Query: 574 EFLAEDNMCPHFKEVYDATENMMKRIKSA 602
EF+ D P +++YD + + ++S+
Sbjct: 640 EFIVRDKSRPESEKIYDRLHCLGRHMRSS 668
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 359/670 (53%), Gaps = 48/670 (7%)
Query: 74 ALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQN-SVEPDRFTFACTLKACS 132
A +F +++ D ++N +I ++ P+ A+ ++ M PD T L C+
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 133 RIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNS 192
+ G+Q+H + S V N L+ +YA CG +D A +F MS +DV SWN+
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 193 MFSGYVKTECWREIVDLFNEMRD-----------------------------------LG 217
M +GY + + + V LF +M++ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 218 VKFDEVTLINVLMACGRLADI----ELGGWISEYMEEKELNGNVK---LMTAVVDMYAKC 270
+K +EVTLI+VL C + + E+ + +Y + NG+ ++ ++DMYAKC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 271 GHVDKARRLFEQMNIK--DVVAWSAMISGYSQARRCKEALGVFHDM--QMANVVPNEVTM 326
VD AR +F+ ++ K DVV W+ MI GYSQ +AL + +M + PN T+
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 327 VSVLSCCAVLGALETGKWVHLY-VKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMP 385
L CA L AL GK +H Y ++ ++ + + + L+D YAKCG I +A VF M
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 386 LKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRE 445
KN WT L+ +G GE AL + MR + + V + VL ACSH GM+D+G E
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 446 LFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAH 505
F M F + P EHY C+VD+LGRAG + A + I+ MP+ P PV+W L+ CR H
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
Query: 506 KNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSL 565
V++GE + + + L H G Y LLS++YA+AGR +D R+ + MR +G+KK PGCS
Sbjct: 661 GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSW 720
Query: 566 IELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVA 625
+E F D PH KE+Y + M+RIK GYVP T A D ++++K+ +
Sbjct: 721 VEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLF 780
Query: 626 HHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFK 685
HSEKLA+A+G++ G IRI+KNLRVC DCH A +S++ + +I++RD +RFHHFK
Sbjct: 781 EHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFK 840
Query: 686 EGSCSCNDYW 695
GSCSC YW
Sbjct: 841 NGSCSCKGYW 850
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 164/549 (29%), Positives = 260/549 (47%), Gaps = 58/549 (10%)
Query: 16 TQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYAL 75
T PE I +CKT + +H L+ L ++ +L+ + I + +A+
Sbjct: 25 TSAPEITPPFI-HKCKTISQVKLIHQKLLSFGI-LTLNLTSHLI---STYISVGCLSHAV 79
Query: 76 SIFHKINEPDSSAY--NIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSR 133
S+ + D+ Y N +IR++ + + L+ M S PD +TF KAC
Sbjct: 80 SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 139
Query: 134 IRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSM 193
I ++ GE HA L +GF V N L+ +Y+ C + ARK+FD MS DV SWNS+
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199
Query: 194 FSGYVKTECWREIVDLFNEM-RDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKE 252
Y K + +++F+ M + G + D +TL+NVL C L LG + + E
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 253 LNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCK------- 305
+ N+ + +VDMYAKCG +D+A +F M++KDVV+W+AM++GYSQ R +
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 306 ----------------------------EALGVFHDMQMANVVPNEVTMVSVLSCCAVLG 337
EALGV M + + PNEVT++SVLS CA +G
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
Query: 338 ALETGKWVHLYVKKKRMELTIT-------LGTALMDFYAKCGLIENAVEVFKKMPLK--N 388
AL GK +H Y K ++L + L+D YAKC ++ A +F + K +
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERD 439
Query: 389 VFFWTVLIQCLASNGQGERALETYYIMREKNIE--PNDVAFIAVLSACSHVGMVDEGREL 446
V WTV+I + +G +ALE M E++ + PN L AC+ + + G+++
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Query: 447 FVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHK 506
R+ + C++D+ + G + +A NM + N V W +L+ H
Sbjct: 500 HAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMH- 557
Query: 507 NVKVGEESL 515
GEE+L
Sbjct: 558 --GYGEEAL 564
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 209/474 (44%), Gaps = 55/474 (11%)
Query: 92 MIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSG 151
MIR + + ++ K L ++ P+ T + + + + + IH ++L
Sbjct: 1 MIRRLLIPNAAAKSHQYIKVSLFSTSAPE-----ITPPFIHKCKTISQVKLIHQKLLS-- 53
Query: 152 FGCRQL-VTNTLIHLYANCGRIDIARKMFDRM--SNRDVFSWNSMFSGYVKTECWREIVD 208
FG L +T+ LI Y + G + A + R S+ V+ WNS+ Y C + +
Sbjct: 54 FGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLY 113
Query: 209 LFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYA 268
LF M L D T V ACG ++ + G NV + A+V MY+
Sbjct: 114 LFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYS 173
Query: 269 KCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMA-NVVPNEVTMV 327
+C + AR++F++M++ DVV+W+++I Y++ + K AL +F M P+ +T+V
Sbjct: 174 RCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 328 SVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLK 387
+VL CA LG GK +H + M + +G L+D YAKCG+++ A VF M +K
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 388 NVFFWTVLIQCLASNGQGERALETYYIMREK----------------------------- 418
+V W ++ + G+ E A+ + M+E+
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 419 ------NIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYG-------C 465
I+PN+V I+VLS C+ VG + G+E+ + + ++ R +G
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK-YPIDLRKNGHGDENMVINQ 412
Query: 466 MVDILGRAGLVEEAYQFIKNM-PIPPNPVIWRTLLAACRAHKNVKVGEESLKNL 518
++D+ + V+ A ++ P + V W ++ H + E L +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 163/368 (44%), Gaps = 57/368 (15%)
Query: 38 QVHAHLIKSRFHL--NPTISENLLEAAAILIPAT--TMDYALSIFHKIN--EPDSSAYNI 91
++H + IK L N EN++ I + A +D A ++F ++ E D + +
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 92 MIRAFTLKQSPQEAVMLYKTMLQNSVE--PDRFTFACTLKACSRIRALEEGEQIHAQILK 149
MI ++ +A+ L M + + P+ FT +C L AC+ + AL G+QIHA L+
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 150 SGFGCRQL-VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVD 208
+ L V+N LI +YA CG I AR +FD M ++ +W S+ +GY E +
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 209 LFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKE----LNGNVKLMTAVV 264
+F+EMR +G K D VTL+ VL AC I+ G EY + ++ + +V
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG---MEYFNRMKTVFGVSPGPEHYACLV 622
Query: 265 DMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEV 324
D+ + G ++ A RL E+M ++ P V
Sbjct: 623 DLLGRAGRLNAALRLIEEMPME----------------------------------PPPV 648
Query: 325 TMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLG---TALMDFYAKCGLIENAVEVF 381
V+ LSCC + G +E G+ Y +K EL T L + YA G ++ +
Sbjct: 649 VWVAFLSCCRIHGKVELGE----YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIR 704
Query: 382 KKMPLKNV 389
M K V
Sbjct: 705 SLMRHKGV 712
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 45/308 (14%)
Query: 257 VKLMTAVVDMYAKCGHVDKARRLFEQMNIKD--VVAWSAMISGYSQ---ARRCKEALGVF 311
+ L + ++ Y G + A L + D V W+++I Y A +C G+
Sbjct: 59 LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118
Query: 312 HDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKC 371
H + P+ T V C + ++ G+ H + +G AL+ Y++C
Sbjct: 119 HSLSW---TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC 175
Query: 372 GLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIM-REKNIEPNDVAFIAV 430
+ +A +VF +M + +V W +I+ A G+ + ALE + M E P+++ + V
Sbjct: 176 RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 431 LSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPP 490
L C+ +G G++L + ++ M C+VD+ + G+++EA NM
Sbjct: 236 LPPCASLGTHSLGKQLHC-FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM---- 290
Query: 491 NPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMN 550
S+K++V+ M +G Y+ GR EDA+R+
Sbjct: 291 -----------------------SVKDVVSWNAMVAG--------YSQIGRFEDAVRLFE 319
Query: 551 QMREQGIK 558
+M+E+ IK
Sbjct: 320 KMQEEKIK 327
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/599 (38%), Positives = 350/599 (58%), Gaps = 20/599 (3%)
Query: 99 KQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLV 158
KQ+P ML + + +S +P + ++IHA +L++GF + +
Sbjct: 4 KQTPLTKQMLSELLRASSSKPKQL------------------KKIHAIVLRTGFSEKNSL 45
Query: 159 TNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGV 218
L+ G + AR++FD M +F WN++F GYV+ + E + L+ +MRDLGV
Sbjct: 46 LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGV 105
Query: 219 KFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARR 278
+ DE T V+ A +L D G + ++ + + T +V MY K G + A
Sbjct: 106 RPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEF 165
Query: 279 LFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGA 338
LFE M +KD+VAW+A ++ Q AL F+ M V + T+VS+LS C LG+
Sbjct: 166 LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGS 225
Query: 339 LETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQC 398
LE G+ ++ +K+ ++ I + A +D + KCG E A +F++M +NV W+ +I
Sbjct: 226 LEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVG 285
Query: 399 LASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSM--SRDFDL 456
A NG AL + M+ + + PN V F+ VLSACSH G+V+EG+ F M S D +L
Sbjct: 286 YAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNL 345
Query: 457 EPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLK 516
EPR EHY CMVD+LGR+GL+EEAY+FIK MP+ P+ IW LL AC H+++ +G++
Sbjct: 346 EPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVAD 405
Query: 517 NLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFL 576
LV P ++LLS+IYA+AG+ + +V ++MR+ G KK S +E +G+I+ F
Sbjct: 406 VLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFN 465
Query: 577 AEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFG 636
D P K +Y+ + ++K+I+ GYVP+T D E ++KE S++HHSEKLAIAFG
Sbjct: 466 RGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFG 525
Query: 637 LIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
LI+ PG IR+ KNLR C DCH +K +S + + EI++RD+ RFHHF+ G CSC ++W
Sbjct: 526 LIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 205/371 (55%), Gaps = 7/371 (1%)
Query: 34 KDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMI 93
K L ++HA ++++ F ++ LLE L+ M YA +F ++++P +N +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLEN---LVVIGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 94 RAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFG 153
+ + Q P E+++LYK M V PD FT+ +KA S++ G +HA ++K GFG
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 154 CRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEM 213
C +V L+ +Y G + A +F+ M +D+ +WN+ + V+T ++ FN+M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 214 RDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHV 273
V+FD T++++L ACG+L +E+G I + ++E++ N+ + A +DM+ KCG+
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 274 DKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCC 333
+ AR LFE+M ++VV+WS MI GY+ +EAL +F MQ + PN VT + VLS C
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 334 AVLGALETGK-WVHLYVKK--KRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLK-NV 389
+ G + GK + L V+ K +E ++D + GL+E A E KKMP++ +
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 390 FFWTVLIQCLA 400
W L+ A
Sbjct: 382 GIWGALLGACA 392
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/760 (32%), Positives = 387/760 (50%), Gaps = 108/760 (14%)
Query: 39 VHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSA---------- 88
VH ++I F I L++ + ++ ++YA +F +I+EPD A
Sbjct: 36 VHGNIITFGFQPRAHILNRLID---VYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 89 -----------------------YNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFA 125
YN MI F+ A+ L+ M +PD FTFA
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 126 CTLKACSRIRALEEGE--QIHAQILKSGFGCRQLVTNTLIHLYANCGR----IDIARKMF 179
L + + A +E + Q HA LKSG G V+N L+ +Y+ C + ARK+F
Sbjct: 153 SVLAGLALV-ADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 180 DRMSNRDVFSW--------------------------------NSMFSGYVKTECWREIV 207
D + +D SW N+M SGYV ++E +
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 208 DLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMY 267
++ M G++ DE T +V+ AC ++LG + Y+ +E + + ++V +Y
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLY 330
Query: 268 AKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVV------- 320
KCG D+AR +FE+M KD+V+W+A++SGY + EA +F +M+ N++
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
Query: 321 ------------------------PNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMEL 356
P + + CAVLGA G+ H + K +
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS 450
Query: 357 TITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMR 416
+++ G AL+ YAKCG++E A +VF+ MP + W LI L +G G A++ Y M
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEML 510
Query: 417 EKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLV 476
+K I P+ + + VL+ACSH G+VD+GR+ F SM + + P +HY ++D+L R+G
Sbjct: 511 KKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKF 570
Query: 477 EEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIY 536
+A I+++P P IW LL+ CR H N+++G + L L P H G Y+LLS+++
Sbjct: 571 SDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMH 630
Query: 537 ASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMM 596
A+ G+ E+ RV MR++G+KK CS IE++ +++ FL +D P + VY +++
Sbjct: 631 AATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLG 690
Query: 597 KRIKSAGYVPNTADARLDAEEDD-KEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVC 655
K ++ GYVP+T+ D E D KE + HSEK+A+AFGL++ PGTTIRI KNLR C
Sbjct: 691 KEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTC 750
Query: 656 TDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
DCHN + +S V R+I++RDR RFHHF+ G CSC ++W
Sbjct: 751 GDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 206/501 (41%), Gaps = 112/501 (22%)
Query: 124 FACTLKACSRIR--ALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDR 181
+A L+ C +R +L+ +H I+ GF R + N LI +Y ++ AR++FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 182 MSNRDVFSWNSMFSGYVKTE--------------CWREIV-------------------D 208
+S D + +M SGY + C R+ V +
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 209 LFNEMRDLGVKFDEVTLINVLMACGRLADIEL-------------GGWISEYME------ 249
LF +M+ G K D T +VL +AD E G+I+
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 250 -----------------EKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQM--NIKDVVA 290
++ L + + T ++ Y K G+ D L E M N+K +VA
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK-LVA 253
Query: 291 WSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVK 350
++AMISGY +EAL + M + + +E T SV+ CA G L+ GK VH YV
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV- 312
Query: 351 KKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPL------------------------ 386
+R + + +L+ Y KCG + A +F+KMP
Sbjct: 313 LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 387 -------KNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGM 439
KN+ W ++I LA NG GE L+ + M+ + EP D AF + +C+ +G
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 440 VDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLL 499
G++ + + + + ++ + + G+VEEA Q + MP + V W L+
Sbjct: 433 YCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALI 490
Query: 500 AACRAHKN----VKVGEESLK 516
AA H + V V EE LK
Sbjct: 491 AALGQHGHGAEAVDVYEEMLK 511
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 37 NQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAF 96
Q HA L+K F + + L+ A ++ A +F + DS ++N +I A
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYA---KCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 97 TLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQ 142
EAV +Y+ ML+ + PDR T L ACS +++G +
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/483 (43%), Positives = 315/483 (65%), Gaps = 14/483 (2%)
Query: 220 FDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRL 279
F +L+N+ +CG L ++ + + + ++ +VV+ YAK G +D AR+L
Sbjct: 98 FVRTSLLNMYSSCGDLRS-------AQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKL 150
Query: 280 FEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQM-----ANVVPNEVTMVSVLSCCA 334
F++M ++V++WS +I+GY + KEAL +F +MQ+ A V PNE TM +VLS C
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 335 VLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKM-PLKNVFFWT 393
LGALE GKWVH Y+ K +E+ I LGTAL+D YAKCG +E A VF + K+V ++
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 394 VLIQCLASNGQGERALETYYIMR-EKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSR 452
+I CLA G + + + M NI PN V F+ +L AC H G+++EG+ F M
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
Query: 453 DFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGE 512
+F + P ++HYGCMVD+ GR+GL++EA FI +MP+ P+ +IW +LL+ R ++K E
Sbjct: 331 EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCE 390
Query: 513 ESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEI 572
+LK L+ L+PM+SG Y+LLS++YA GR + + ++M +GI K PGCS +E++G +
Sbjct: 391 GALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVV 450
Query: 573 YEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLA 632
+EF+ D + +Y + +M+R++ AGYV +T + LD E DKE ++++HSEKLA
Sbjct: 451 HEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLA 510
Query: 633 IAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCN 692
IAF L++ PGT +RI KNLR+C DCH K+ISK+F+REIVVRD RFHHF++GSCSC
Sbjct: 511 IAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCR 570
Query: 693 DYW 695
D+W
Sbjct: 571 DFW 573
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 189/374 (50%), Gaps = 44/374 (11%)
Query: 68 ATTMDYALSIFH-KINEPDSSAYNIMIRAFTLK-QSPQ--EAVMLYKTMLQNSVEPDRFT 123
A + YA IFH + + +S +NI+IRA SPQ + +Y M + V PD T
Sbjct: 5 AAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHT 64
Query: 124 FACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGR------------ 171
F L + L G++ HAQIL G V +L+++Y++CG
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG 124
Query: 172 -------------------IDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNE 212
ID ARK+FD M R+V SW+ + +GYV ++E +DLF E
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 213 MR-----DLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMY 267
M+ + V+ +E T+ VL ACGRL +E G W+ Y+++ + ++ L TA++DMY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 268 AKCGHVDKARRLFEQM-NIKDVVAWSAMISGYSQARRCKEALGVFHDMQMA-NVVPNEVT 325
AKCG +++A+R+F + + KDV A+SAMI + E +F +M + N+ PN VT
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 326 MVSVLSCCAVLGALETGK-WVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKM 384
V +L C G + GK + + +++ + +I ++D Y + GLI+ A M
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 385 PLK-NVFFWTVLIQ 397
P++ +V W L+
Sbjct: 365 PMEPDVLIWGSLLS 378
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/667 (34%), Positives = 374/667 (56%), Gaps = 11/667 (1%)
Query: 37 NQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAF 96
QVH +L+KS LN S L++ + A +F + E + +++ ++
Sbjct: 26 GQVHCYLLKSGSGLNLITSNYLID---MYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 97 TLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQ 156
L + ++ L+ M + + P+ FTF+ LKAC + ALE+G QIH LK GF
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 157 LVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDL 216
V N+L+ +Y+ CGRI+ A K+F R+ +R + SWN+M +G+V + +D F M++
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 217 GVKF--DEVTLINVLMACGRLADIELGGWISEYMEEKELN--GNVKLMTAVVDMYAKCGH 272
+K DE TL ++L AC I G I ++ + + + ++VD+Y KCG+
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 273 VDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSC 332
+ AR+ F+Q+ K +++WS++I GY+Q EA+G+F +Q N + + S++
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 333 CAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFW 392
A L GK + K L ++ +++D Y KCGL++ A + F +M LK+V W
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382
Query: 393 TVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSR 452
TV+I +G G++++ +Y M NIEP++V ++AVLSACSH GM+ EG ELF +
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 453 DFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGE 512
++PR+EHY C+VD+LGRAG ++EA I MPI PN IW+TLL+ CR H ++++G+
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGK 502
Query: 513 ESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEI 572
E K L+ ++ + +Y+++S++Y AG + +G+KK G S +E++ E+
Sbjct: 503 EVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREV 562
Query: 573 YEFLAEDNMCPHFKEVYDATENMMKRIKSA-GYVPNTADARLDAEEDDKEASVAHHSEKL 631
+ F + ++ P + + + +R++ GYV D +++ KE ++ HSEKL
Sbjct: 563 HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKL 622
Query: 632 AIAFGLIRAS---PGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGS 688
AI L G TIR+ KNLRVC DCH K +SK+ VVRD RFH F++G
Sbjct: 623 AIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGC 682
Query: 689 CSCNDYW 695
CSC DYW
Sbjct: 683 CSCGDYW 689
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 230/473 (48%), Gaps = 43/473 (9%)
Query: 121 RFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFD 180
R L+ C+R ++G Q+H +LKSG G + +N LI +Y C +A K+FD
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 181 RMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIEL 240
M R+V SW+++ SG+V + + LF+EM G+ +E T L ACG L +E
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 241 GGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQ 300
G I + + V++ ++VDMY+KCG +++A ++F ++ + +++W+AMI+G+
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 301 ARRCKEALGVFHDMQMANVV--PNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMEL-- 356
A +AL F MQ AN+ P+E T+ S+L C+ G + GK +H ++ +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 357 TITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMR 416
+ T+ +L+D Y KCG + +A + F ++ K + W+ LI A G+ A+ + ++
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 417 EKNIEPNDVAFIAVLSACSHVGMVDEGREL-FVSMSRDFDLEPRMEHYGCMVDILGRAGL 475
E N + + A +++ + ++ +G+++ +++ LE + +VD+ + GL
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGL 363
Query: 476 VEEAYQFIKNMP----------------------------------IPPNPVIWRTLLAA 501
V+EA + M I P+ V + +L+A
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 502 CRAHKNVKVGEESLKNLVTLEPMHS--GDYILLSDIYASAGRCEDALRVMNQM 552
C +K GEE L+ + Y + D+ AGR ++A +++ M
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/597 (38%), Positives = 356/597 (59%), Gaps = 40/597 (6%)
Query: 135 RALEEGEQIHAQILKSGF--GCRQLVTNTLIH-LYANCGRIDIARKMFDRMSNRDVFSWN 191
++++E QIHA IL+ R V N +H YA+ G+I + +F + + D+F
Sbjct: 40 QSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLF--- 96
Query: 192 SMFSGYVKTECWREIVD----LFNEMRDLGVKFDEVTLINVLMAC----GRLADIE---- 239
+F+ + T + D L+ ++ + +E T ++L +C G+L
Sbjct: 97 -LFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKF 155
Query: 240 -LG-------GWISEYMEEKELNGNVKLM-----------TAVVDMYAKCGHVDKARRLF 280
LG G + Y + ++ K+ TA++ YAK G+V+ AR LF
Sbjct: 156 GLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALF 215
Query: 281 EQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQM-ANVVPNEVTMVSVLSCCAVLGAL 339
+ M +D+V+W+ MI GY+Q +AL +F + P+E+T+V+ LS C+ +GAL
Sbjct: 216 DSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL 275
Query: 340 ETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCL 399
ETG+W+H++VK R+ L + + T L+D Y+KCG +E AV VF P K++ W +I
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 400 ASNGQGERALETYYIMRE-KNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEP 458
A +G + AL + M+ ++P D+ FI L AC+H G+V+EG +F SM +++ ++P
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 459 RMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNL 518
++EHYGC+V +LGRAG ++ AY+ IKNM + + V+W ++L +C+ H + +G+E + L
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYL 455
Query: 519 VTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAE 578
+ L +SG Y+LLS+IYAS G E +V N M+E+GI K PG S IE++ +++EF A
Sbjct: 456 IGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAG 515
Query: 579 DNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLI 638
D KE+Y + +RIKS GYVPNT D EE +KE S+ HSE+LAIA+GLI
Sbjct: 516 DREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLI 575
Query: 639 RASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
PG+ ++I KNLRVC+DCH TK+ISK+ R+IV+RDR RFHHF +GSCSC D+W
Sbjct: 576 STKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 217/466 (46%), Gaps = 80/466 (17%)
Query: 19 PENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIF 78
P +++ + ++ ++ Q+HA +++ L+P L+ + ++L++F
Sbjct: 28 PPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALF 87
Query: 79 HKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALE 138
H+ +PD + I ++ +A +LY +L + + P+ FTF+ LK+CS +
Sbjct: 88 HQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----K 143
Query: 139 EGEQIHAQILKSGFGC------------------------------RQLVTNT-LIHLYA 167
G+ IH +LK G G R LV++T +I YA
Sbjct: 144 SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYA 203
Query: 168 NCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG-VKFDEVTLI 226
G ++ AR +FD M RD+ SWN M GY + + + LF ++ G K DE+T++
Sbjct: 204 KQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVV 263
Query: 227 NVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIK 286
L AC ++ +E G WI +++ + NVK+ T ++DMY+KCG +++A +F K
Sbjct: 264 AALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 287 DVVAWSAMISGYSQARRCKEALGVFHDMQ-MANVVPNEVTMVSVLSCCAVLGALETGKWV 345
D+VAW+AMI+GY+ ++AL +F++MQ + + P ++T + L C
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC------------ 371
Query: 346 HLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLK-----NVFFWTVLIQCLA 400
A GL+ + +F+ M + + + L+ L
Sbjct: 372 -----------------------AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 401 SNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGREL 446
GQ +RA ET ++ N++ + V + +VL +C G G+E+
Sbjct: 409 RAGQLKRAYET---IKNMNMDADSVLWSSVLGSCKLHGDFVLGKEI 451
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/574 (37%), Positives = 338/574 (58%), Gaps = 2/574 (0%)
Query: 124 FACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMS 183
+ L AC RAL +G+++HA ++K+ + + L+ Y C ++ ARK+ D M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 184 NRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGW 243
++V SW +M S Y +T E + +F EM K +E T VL +C R + + LG
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 244 ISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARR 303
I + + + ++ + ++++DMYAK G + +AR +FE + +DVV+ +A+I+GY+Q
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 304 CKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTA 363
+EAL +FH + + PN VT S+L+ + L L+ GK H +V ++ + L +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 364 LMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMR-EKNIEP 422
L+D Y+KCG + A +F MP + W ++ + +G G LE + +MR EK ++P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 423 NDVAFIAVLSACSHVGMVDEGRELFVSM-SRDFDLEPRMEHYGCMVDILGRAGLVEEAYQ 481
+ V +AVLS CSH M D G +F M + ++ +P EHYGC+VD+LGRAG ++EA++
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 482 FIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGR 541
FIK MP P + +LL ACR H +V +GE + L+ +EP ++G+Y++LS++YASAGR
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 542 CEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKS 601
D V M ++ + K PG S I+ + ++ F A D P +EV + + ++K
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 602 AGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNA 661
AGYVP+ + D +E+ KE + HSEKLA+ FGLI G IR+ KNLR+C DCHN
Sbjct: 535 AGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNF 594
Query: 662 TKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
KI SKVF RE+ +RD+ RFH +G CSC DYW
Sbjct: 595 AKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 191/362 (52%), Gaps = 10/362 (2%)
Query: 31 KTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYN 90
+ +D +VHAH+IK+R+ + LL ++ A + ++ E + ++
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLL---IFYGKCDCLEDARKVLDEMPEKNVVSWT 122
Query: 91 IMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKS 150
MI ++ EA+ ++ M+++ +P+ FTFA L +C R L G+QIH I+K
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 151 GFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLF 210
+ V ++L+ +YA G+I AR++F+ + RDV S ++ +GY + E +++F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 211 NEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKC 270
+ + G+ + VT ++L A LA ++ G ++ +EL L +++DMY+KC
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 271 GHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQ-MANVVPNEVTMVSV 329
G++ ARRLF+ M + ++W+AM+ GYS+ +E L +F M+ V P+ VT+++V
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 330 LSCCAVLGALETGKWVHLYVKKKRMELTITLGT----ALMDFYAKCGLIENAVEVFKKMP 385
LS C+ +TG ++++ E GT ++D + G I+ A E K+MP
Sbjct: 363 LSGCSHGRMEDTG--LNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Query: 386 LK 387
K
Sbjct: 421 SK 422
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/695 (34%), Positives = 387/695 (55%), Gaps = 14/695 (2%)
Query: 8 PAKTVTTITQFPENPKTLIVQQCKTTKDLNQVHAHLIKSRF-HLNPTISENLLEAAAILI 66
P V ++ FPE + ++ K +VH H+I + I L+ A
Sbjct: 308 PESYVILLSSFPEYS---LAEEVGLKKG-REVHGHVITTGLVDFMVGIGNGLVNMYA--- 360
Query: 67 PATTMDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFAC 126
++ A +F+ + + DS ++N MI EAV YK+M ++ + P FT
Sbjct: 361 KCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 127 TLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRD 186
+L +C+ ++ + G+QIH + LK G V+N L+ LYA G ++ RK+F M D
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHD 480
Query: 187 VFSWNSMFSGYVKTE-CWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWIS 245
SWNS+ ++E E V F + G K + +T +VL A L+ ELG I
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 246 EYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQM-NIKDVVAWSAMISGYSQARRC 304
+ + A++ Y KCG +D ++F +M +D V W++MISGY
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 305 KEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTAL 364
+AL + M + +VLS A + LE G VH + +E + +G+AL
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSAL 660
Query: 365 MDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMR-EKNIEPN 423
+D Y+KCG ++ A+ F MP++N + W +I A +GQGE AL+ + M+ + P+
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD 720
Query: 424 DVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFI 483
V F+ VLSACSH G+++EG + F SMS + L PR+EH+ CM D+LGRAG +++ FI
Sbjct: 721 HVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFI 780
Query: 484 KNMPIPPNPVIWRTLLAA-CRAH-KNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGR 541
+ MP+ PN +IWRT+L A CRA+ + ++G+++ + L LEP ++ +Y+LL ++YA+ GR
Sbjct: 781 EKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGR 840
Query: 542 CEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKS 601
ED ++ +M++ +KK G S + + ++ F+A D P +Y + + ++++
Sbjct: 841 WEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Query: 602 AGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGT-TIRISKNLRVCTDCHN 660
AGYVP T A D E+++KE +++HSEKLA+AF L T IRI KNLRVC DCH+
Sbjct: 901 AGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHS 960
Query: 661 ATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
A K ISK+ R+I++RD RFHHF++G+CSC+D+W
Sbjct: 961 AFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 186/387 (48%), Gaps = 28/387 (7%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q+H + K + ++ +S L+ I ++ YAL F I +S ++N +I ++
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIG--SVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLK-ACS----RIRALEEGEQIHAQILKSGF 152
+ A ++ +M + P +TF + ACS +R LE QI I KSG
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKSGL 239
Query: 153 GCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNE 212
V + L+ +A G + ARK+F++M R+ + N + G V+ + E LF +
Sbjct: 240 LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 213 MRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNV----------KLMTA 262
M + + + + +L + + E G + +E++G+V +
Sbjct: 300 MNSM-IDVSPESYVILLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 263 VVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPN 322
+V+MYAKCG + ARR+F M KD V+W++MI+G Q EA+ + M+ +++P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 323 EVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFK 382
T++S LS CA L + G+ +H K ++L +++ ALM YA+ G + ++F
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 383 KMPLKNVFFWTVLIQCLASNGQGERAL 409
MP + W +I LA + ER+L
Sbjct: 475 SMPEHDQVSWNSIIGALA---RSERSL 498
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 228/489 (46%), Gaps = 20/489 (4%)
Query: 26 IVQQCKTTKDLNQV-HAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEP 84
VQ C + + H+ L K+R + + NL+ A + A +F ++
Sbjct: 9 FVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINA---YLETGDSVSARKVFDEMPLR 65
Query: 85 DSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALE--EGEQ 142
+ ++ ++ ++ +EA++ + M++ + +++ F L+AC I ++ G Q
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 143 IHAQILKSGFGCRQLVTNTLIHLYANC-GRIDIARKMFDRMSNRDVFSWNSMFSGYVKTE 201
IH + K + +V+N LI +Y C G + A F + ++ SWNS+ S Y +
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 202 CWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLA--DIELGGWISEYMEEKELNGNVKL 259
R +F+ M+ G + E T +++ L D+ L I +++ L ++ +
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 260 MTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDM-QMAN 318
+ +V +AK G + AR++F QM ++ V + ++ G + + +EA +F DM M +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 319 VVPNE-VTMVSVL---SCCAVLGALETGKWVHLYV-KKKRMELTITLGTALMDFYAKCGL 373
V P V ++S S +G L+ G+ VH +V ++ + +G L++ YAKCG
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 374 IENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSA 433
I +A VF M K+ W +I L NG A+E Y MR +I P I+ LS+
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 434 CSHVGMVDEGRELFV-SMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNP 492
C+ + G+++ S+ DL + + ++ + G + E + +MP +
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMP-EHDQ 481
Query: 493 VIWRTLLAA 501
V W +++ A
Sbjct: 482 VSWNSIIGA 490
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 112/270 (41%), Gaps = 53/270 (19%)
Query: 316 MANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIE 375
M N VP + V SC GA ++ H + K R++ + L L++ Y + G
Sbjct: 1 MTNCVP----LSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSV 53
Query: 376 NAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACS 435
+A +VF +MPL+N W ++ + NG+ + AL M ++ I N AF++VL AC
Sbjct: 54 SARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQ 113
Query: 436 HVGMVD--EGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPV 493
+G V GR++ +G M + V + N+ I +
Sbjct: 114 EIGSVGILFGRQI----------------HGLMFKLSYAVDAV------VSNVLI---SM 148
Query: 494 IWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMR 553
W+ + + + G+ +KN V+ + S +Y+ AG A R+ + M+
Sbjct: 149 YWKCIGSV--GYALCAFGDIEVKNSVSWNSIIS--------VYSQAGDQRSAFRIFSSMQ 198
Query: 554 EQGIKK---------TPGCSLIELDGEIYE 574
G + T CSL E D + E
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/623 (35%), Positives = 356/623 (57%), Gaps = 2/623 (0%)
Query: 74 ALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSR 133
A +F +++ DS +YN MI + + +E+V ++ L + +PD T + L+AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 134 IRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSM 193
+R L + I+ +LK+GF V N LI +YA CG + AR +F+ M +D SWNS+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 194 FSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKEL 253
SGY+++ E + LF M + + D +T + ++ RLAD++ G + + +
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 254 NGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHD 313
++ + A++DMYAKCG V + ++F M D V W+ +IS + L V
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 314 MQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGL 373
M+ + VVP+ T + L CA L A GK +H + + E + +G AL++ Y+KCG
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 374 IENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSA 433
+EN+ VF++M ++V WT +I G+GE+ALET+ M + I P+ V FIA++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 434 CSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPV 493
CSH G+VDEG F M + ++P +EHY C+VD+L R+ + +A +FI+ MPI P+
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679
Query: 494 IWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMR 553
IW ++L ACR +++ E + ++ L P G IL S+ YA+ + + + ++
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 554 EQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARL 613
++ I K PG S IE+ ++ F + D+ P + +Y + E + + GY+P+ +
Sbjct: 740 DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQ 799
Query: 614 D-AEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNRE 672
+ EE++K + HSE+LAIAFGL+ PGT +++ KNLRVC DCH TK+ISK+ RE
Sbjct: 800 NLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGRE 859
Query: 673 IVVRDRTRFHHFKEGSCSCNDYW 695
I+VRD RFH FK+G+CSC D W
Sbjct: 860 ILVRDANRFHLFKDGTCSCKDRW 882
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 246/483 (50%), Gaps = 17/483 (3%)
Query: 35 DLNQVHAHLIKSRFHLNPTISENLLEAAA-ILIPATTMDYALSIFHKINEPDSSAY--NI 91
+L ++HA +I + S L++ + PA++ LS+F +++ P + Y N
Sbjct: 22 ELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASS----LSVFRRVS-PAKNVYLWNS 76
Query: 92 MIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSG 151
+IRAF+ EA+ Y + ++ V PD++TF +KAC+ + E G+ ++ QIL G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 152 FGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFN 211
F V N L+ +Y+ G + AR++FD M RD+ SWNS+ SGY + E +++++
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 212 EMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCG 271
E+++ + D T+ +VL A G L ++ G + + + +N V + +V MY K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 272 HVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLS 331
ARR+F++M+++D V+++ MI GY + +E++ +F + + P+ +T+ SVL
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLR 315
Query: 332 CCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFF 391
C L L K+++ Y+ K L T+ L+D YAKCG + A +VF M K+
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 392 WTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMS 451
W +I +G A++ + +M + + + ++ ++S + + + G+ L +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 452 RD---FDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNV 508
+ DL ++D+ + G V ++ + +M + V W T+++AC +
Sbjct: 436 KSGICIDLSVS----NALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGDF 490
Query: 509 KVG 511
G
Sbjct: 491 ATG 493
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/659 (34%), Positives = 380/659 (57%), Gaps = 4/659 (0%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
++HA ++KS H + N L A+ M A I ++N D +N +I+ +
Sbjct: 305 EIHASVLKSSTHSSELYVCNAL--IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
+EA+ + M+ + D + + A R+ L G ++HA ++K G+
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG 217
V NTLI +Y+ C + F RM ++D+ SW ++ +GY + +C E ++LF ++
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 218 VKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKAR 277
++ DE+ L ++L A L + + I ++ K L V + +VD+Y KC ++ A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYAT 541
Query: 278 RLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLG 337
R+FE + KDVV+W++MIS + EA+ +F M + + V ++ +LS A L
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 601
Query: 338 ALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQ 397
AL G+ +H Y+ +K L ++ A++D YA CG +++A VF ++ K + +T +I
Sbjct: 602 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 661
Query: 398 CLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLE 457
+G G+ A+E + MR +N+ P+ ++F+A+L ACSH G++DEGR M +++LE
Sbjct: 662 AYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELE 721
Query: 458 PRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKN 517
P EHY C+VD+LGRA V EA++F+K M P +W LLAACR+H ++GE + +
Sbjct: 722 PWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQR 781
Query: 518 LVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLA 577
L+ LEP + G+ +L+S+++A GR D +V +M+ G++K PGCS IE+DG++++F A
Sbjct: 782 LLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTA 841
Query: 578 EDNMCPHFKEVYDATENMMKRI-KSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFG 636
D P KE+Y+ + +++ + GYV +T + +E +K + HSE++AIA+G
Sbjct: 842 RDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 901
Query: 637 LIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
L+R +RI+KNLRVC DCH K++SK+F R+IV+RD RFHHF+ G CSC D W
Sbjct: 902 LLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 238/489 (48%), Gaps = 17/489 (3%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILI--PATTMDYALSIFHKINEPDSSAYNIMIRA 95
Q+H+ + K+ P+ + L + + ++D A +F ++ + + A+N MI A
Sbjct: 101 QLHSRIFKTF----PSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGA 156
Query: 96 FTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCR 155
+ P A+ LY M V +F LKAC+++R + G ++H+ ++K G+
Sbjct: 157 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216
Query: 156 QLVTNTLIHLYANCGRIDIARKMFDRMSNR-DVFSWNSMFSGYVKTECWREIVDLFNEMR 214
+ N L+ +YA + AR++FD + D WNS+ S Y + E ++LF EM
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 215 DLGVKFDEVTLINVLMACGRLADIELGGWI-SEYMEEKELNGNVKLMTAVVDMYAKCGHV 273
G + T+++ L AC + +LG I + ++ + + + A++ MY +CG +
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336
Query: 274 DKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCC 333
+A R+ QMN DVV W+++I GY Q KEAL F DM A +EV+M S+++
Sbjct: 337 PQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS 396
Query: 334 AVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWT 393
L L G +H YV K + + +G L+D Y+KC L F +M K++ WT
Sbjct: 397 GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWT 456
Query: 394 VLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRD 453
+I A N ALE + + +K +E +++ ++L A S + + +E+ + R
Sbjct: 457 TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 454 FDLEPRMEHYGCMVDILGRA---GLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKV 510
L+ +++ +VD+ G+ G ++ IK + V W +++++ + N
Sbjct: 517 GLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGKDV----VSWTSMISSSALNGNESE 570
Query: 511 GEESLKNLV 519
E + +V
Sbjct: 571 AVELFRRMV 579
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 164/328 (50%), Gaps = 5/328 (1%)
Query: 123 TFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL--VTNTLIHLYANCGRIDIARKMFD 180
FA L+ C + RA+ +G Q+H++I K+ F +L + L+ +Y CG +D A K+FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 181 RMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIEL 240
M +R F+WN+M YV + L+ MR GV + +L AC +L DI
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 241 GGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIK-DVVAWSAMISGYS 299
G + + + + ++ A+V MYAK + ARRLF+ K D V W++++S YS
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 300 QARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELT-I 358
+ + E L +F +M M PN T+VS L+ C + GK +H V K + +
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 359 TLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREK 418
+ AL+ Y +CG + A + ++M +V W LI+ N + ALE + M
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 419 NIEPNDVAFIAVLSACSHVGMVDEGREL 446
+ ++V+ ++++A + + G EL
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMEL 408
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/547 (40%), Positives = 331/547 (60%), Gaps = 15/547 (2%)
Query: 157 LVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDL 216
V N LI ++ A + +M ++ N F +K E V + +
Sbjct: 83 FVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQ 142
Query: 217 GVKFD-------EVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAK 269
V+F E +L+++ CG +A G I M ++ V T++V Y K
Sbjct: 143 IVRFGFQNDVYVENSLVHMYANCGFIA---AAGRIFGQMGFRD----VVSWTSMVAGYCK 195
Query: 270 CGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSV 329
CG V+ AR +F++M +++ WS MI+GY++ ++A+ +F M+ VV NE MVSV
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 330 LSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPLKNV 389
+S CA LGALE G+ + YV K M + + LGTAL+D + +CG IE A+ VF+ +P +
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 390 FFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGRELFVS 449
W+ +I+ LA +G +A+ + M P DV F AVLSACSH G+V++G E++ +
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 450 MSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRAHKNVK 509
M +D +EPR+EHYGC+VD+LGRAG + EA FI M + PN I LL AC+ +KN +
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435
Query: 510 VGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCSLIELD 569
V E L+ ++P HSG Y+LLS+IYA AG+ + + + M+E+ +KK PG SLIE+D
Sbjct: 436 VAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEID 495
Query: 570 GEIYEF-LAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEEDDKEASVAHHS 628
G+I +F + +D P ++ E ++ +I+ GY NT DA D +E++KE+S+ HS
Sbjct: 496 GKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHS 555
Query: 629 EKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFHHFKEGS 688
EKLAIA+G+++ PGTTIRI KNLRVC DCH TK+IS+V+ RE++VRDR RFHHF+ G
Sbjct: 556 EKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGV 615
Query: 689 CSCNDYW 695
CSC DYW
Sbjct: 616 CSCRDYW 622
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 205/404 (50%), Gaps = 36/404 (8%)
Query: 20 ENPKTLIVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLL----EAAAILIPATTMDYAL 75
++PK ++Q C + DL +H L+++ + ++ LL + + P + YA
Sbjct: 12 KHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAY 71
Query: 76 SIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIR 135
IF +I P+ +N++IR F+ P +A Y ML++ + PD TF +KA S +
Sbjct: 72 GIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 131
Query: 136 ALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRI----------------------- 172
+ GEQ H+QI++ GF V N+L+H+YANCG I
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 173 --------DIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVT 224
+ AR+MFD M +R++F+W+ M +GY K C+ + +DLF M+ GV +E
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 225 LINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMN 284
+++V+ +C L +E G EY+ + + N+ L TA+VDM+ +CG ++KA +FE +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 285 IKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKW 344
D ++WS++I G + +A+ F M +P +VT +VLS C+ G +E G
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 345 VHLYVKKKR-MELTITLGTALMDFYAKCGLIENAVEVFKKMPLK 387
++ +KK +E + ++D + G + A KM +K
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 29/258 (11%)
Query: 316 MANVVPNEVTM----VSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALM------ 365
M+N+V N + +++L C+ L K +H ++ + + + + + L+
Sbjct: 1 MSNIVLNTLRFKHPKLALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDD 57
Query: 366 -DFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPND 424
F L+ A +F ++ N+F + +LI+C ++ + +A Y M + I P++
Sbjct: 58 STFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN 117
Query: 425 VAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIK 484
+ F ++ A S + V G + + R F + + +V + G + A +
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVR-FGFQNDVYVENSLVHMYANCGFIAAAGRIFG 176
Query: 485 NMPIPPNPVIWRTLLAA---CRAHKNVK--VGEESLKNLVTLEPMHSGDYILLSDIYASA 539
M + V W +++A C +N + E +NL T M +G YA
Sbjct: 177 QMGF-RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMING--------YAKN 227
Query: 540 GRCEDALRVMNQMREQGI 557
E A+ + M+ +G+
Sbjct: 228 NCFEKAIDLFEFMKREGV 245
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 353/613 (57%), Gaps = 47/613 (7%)
Query: 128 LKACSRIRALEEGEQIHAQILKSGF--GCRQLVTNTLIHLYANCGRIDIARKMFDR--MS 183
L+ C+ L G+++HA + SG R ++N L YA+ G + A+K+FD +S
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 184 NRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGW 243
+D W ++ S + + + LF EMR V+ D+V+++ + C +L D+
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQ 132
Query: 244 ISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARR 303
+ + +VK+ A++DMY KCG V + +R+FE++ K VV+W+ ++ +
Sbjct: 133 GHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 304 CKEALGVFHDMQMANVVP--------------------------------NEVTMVSVLS 331
+ VFH+M N V N VT+ S+LS
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 332 CCAVLGALETGKWVHLYVKKKRMELT-------ITLGTALMDFYAKCGLIENAVEVFKKM 384
CA G L G+WVH+Y KK M + + +GTAL+D YAKCG I++++ VF+ M
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 385 PLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVLSACSHVGMVDEGR 444
+NV W L LA +G+G ++ + M + ++P+D+ F AVLSACSH G+VDEG
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 445 ELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPIPPNPVIWRTLLAACRA 504
F S+ R + LEP+++HY CMVD+LGRAGL+EEA ++ MP+PPN V+ +LL +C
Sbjct: 372 RCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
Query: 505 HKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQMREQGIKKTPGCS 564
H V++ E + L+ + P ++ IL+S++Y + GR + A + +R++GI+K PG S
Sbjct: 431 HGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLS 490
Query: 565 LIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNTADARLDAEED--DKEA 622
I ++ ++ F + D P KE+Y +++RI+SAGYVP+ + +E D +KE
Sbjct: 491 SIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQ 550
Query: 623 SVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKVFNREIVVRDRTRFH 682
++ HSEKLA+ FGL+ P T + + KNLR+C DCH+A KI+SKV++REI++RDR RFH
Sbjct: 551 ALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFH 610
Query: 683 HFKEGSCSCNDYW 695
FK GSCSC+DYW
Sbjct: 611 QFKGGSCSCSDYW 623
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 191/422 (45%), Gaps = 52/422 (12%)
Query: 25 LIVQQCKTTKDL---NQVHAHLIKSRFHLNPT--ISENLLEAAAILIPATTMDYALSIFH 79
L+++ C L ++HA L S P +S L + A + M A +F
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYA---SSGEMVTAQKLFD 67
Query: 80 KI--NEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRAL 137
+I +E D+ + ++ +F+ ++ L+ M + VE D + C C+++ L
Sbjct: 68 EIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDL 127
Query: 138 EEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRI------------------------- 172
+Q H +K G V N L+ +Y CG +
Sbjct: 128 GFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTV 187
Query: 173 ------DIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMR-DLGVKFDEVTL 225
+ R++F M R+ +W M +GY+ RE+++L EM G + VTL
Sbjct: 188 VKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTL 247
Query: 226 INVLMACGRLADIELGGWISEYMEEKEL-------NGNVKLMTAVVDMYAKCGHVDKARR 278
++L AC + ++ +G W+ Y +KE+ +V + TA+VDMYAKCG++D +
Sbjct: 248 CSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 279 LFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGA 338
+F M ++VV W+A+ SG + + + + +F M + V P+++T +VLS C+ G
Sbjct: 308 VFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGI 366
Query: 339 LETGKWVHLYVKKKRMELTITLGTALMDFYAKCGLIENAVEVFKKMPL--KNVFFWTVLI 396
++ G ++ +E + ++D + GLIE A + ++MP+ V ++L
Sbjct: 367 VDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 397 QC 398
C
Sbjct: 427 SC 428
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/578 (36%), Positives = 338/578 (58%), Gaps = 9/578 (1%)
Query: 120 DRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMF 179
D T++ +K C RA+ EG I + +G + N LI++Y ++ A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 180 DRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIE 239
D+M R+V SW +M S Y K + ++ ++L M V+ + T +VL +C ++D+
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 240 L--GGWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISG 297
+ G I E +E +V + +A++D++AK G + A +F++M D + W+++I G
Sbjct: 180 MLHCGIIKEGLE-----SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 234
Query: 298 YSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELT 357
++Q R AL +F M+ A + + T+ SVL C L LE G H+++ K +L
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLI 294
Query: 358 ITLGTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMRE 417
L AL+D Y KCG +E+A+ VF +M ++V W+ +I LA NG + AL+ + M+
Sbjct: 295 --LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 418 KNIEPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVE 477
+PN + + VL ACSH G++++G F SM + + ++P EHYGCM+D+LG+AG ++
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 478 EAYQFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYA 537
+A + + M P+ V WRTLL ACR +N+ + E + K ++ L+P +G Y LLS+IYA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 538 SAGRCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMK 597
++ + + + +MR++GIKK PGCS IE++ +I+ F+ DN P EV ++
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 598 RIKSAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTD 657
R+ GYVP T D E + E S+ HHSEKLA+AFGL+ IRI KNLR+C D
Sbjct: 533 RLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 658 CHNATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
CH K+ SK+ R IV+RD R+HHF++G CSC DYW
Sbjct: 593 CHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 185/362 (51%), Gaps = 11/362 (3%)
Query: 74 ALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSR 133
A +F ++ + + ++ MI A++ + Q+A+ L ML+++V P+ +T++ L++C+
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN- 173
Query: 134 IRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSM 193
+ + +H I+K G V + LI ++A G + A +FD M D WNS+
Sbjct: 174 --GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 194 FSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKEL 253
G+ + ++LF M+ G ++ TL +VL AC LA +ELG + ++ +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG--MQAHVHIVKY 289
Query: 254 NGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHD 313
+ ++ L A+VDMY KCG ++ A R+F QM +DV+ WS MISG +Q +EAL +F
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 314 MQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLG--TALMDFYAKC 371
M+ + PN +T+V VL C+ G LE G W + KK + ++D K
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 372 GLIENAVEVFKKMPLK-NVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAV 430
G +++AV++ +M + + W L+ A Q L Y + ++P D +
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLLG--ACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 431 LS 432
LS
Sbjct: 467 LS 468
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 11/276 (3%)
Query: 26 IVQQCKTTKDLNQVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPD 85
+++ C D+ +H +IK + + L++ A L + ALS+F ++ D
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKL---GEPEDALSVFDEMVTGD 224
Query: 86 SSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHA 145
+ +N +I F A+ L+K M + ++ T L+AC+ + LE G Q H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 146 QILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWRE 205
I+K + ++ N L+ +Y CG ++ A ++F++M RDV +W++M SG + +E
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 206 IVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKL---MTA 262
+ LF M+ G K + +T++ VL AC +E G + M K+L G +
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM--KKLYGIDPVREHYGC 400
Query: 263 VVDMYAKCGHVDKARRLFEQMNIK-DVVAWSAMISG 297
++D+ K G +D A +L +M + D V W ++
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/575 (37%), Positives = 343/575 (59%), Gaps = 12/575 (2%)
Query: 128 LKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGR------IDIARKMFDR 181
LK C I +E +Q+HA+ +K + + + A C ++ A +F
Sbjct: 37 LKRCHNI---DEFKQVHARFIKLSLFYSSSFSASSV--LAKCAHSGWENSMNYAASIFRG 91
Query: 182 MSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELG 241
+ + F +N+M GYV + E + +NEM G + D T +L AC RL I G
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 242 GWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQA 301
I + + L +V + ++++MY +CG ++ + +FE++ K +WS+M+S +
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM 211
Query: 302 RRCKEALGVFHDM-QMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITL 360
E L +F M N+ E MVS L CA GAL G +H ++ + EL I +
Sbjct: 212 GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIV 271
Query: 361 GTALMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNI 420
T+L+D Y KCG ++ A+ +F+KM +N ++ +I LA +G+GE AL + M ++ +
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL 331
Query: 421 EPNDVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAY 480
EP+ V +++VL+ACSH G+V EGR +F M ++ +EP EHYGC+VD+LGRAGL+EEA
Sbjct: 332 EPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEAL 391
Query: 481 QFIKNMPIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAG 540
+ I+++PI N VIWRT L+ CR +N+++G+ + + L+ L + GDY+L+S++Y+
Sbjct: 392 ETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Query: 541 RCEDALRVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIK 600
+D R ++ +G+K+TPG S++EL G+ + F+++D P KE+Y M ++K
Sbjct: 452 MWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLK 511
Query: 601 SAGYVPNTADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHN 660
GY P+ L+ +E++K+ + HS+K+AIAFGL+ PG+ I+I++NLR+C+DCH
Sbjct: 512 FEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHT 571
Query: 661 ATKIISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
TK IS ++ REIVVRDR RFH FK G+CSC DYW
Sbjct: 572 YTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 220/411 (53%), Gaps = 5/411 (1%)
Query: 26 IVQQCKTTKDLNQVHAHLIKSRFHLNPTISEN-LLEAAAILIPATTMDYALSIFHKINEP 84
++++C + QVHA IK + + S + +L A +M+YA SIF I++P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 85 DSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIH 144
+ +N MIR + S +EA+ Y M+Q EPD FT+ C LKAC+R++++ EG+QIH
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 145 AQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWR 204
Q+ K G V N+LI++Y CG ++++ +F+++ ++ SW+SM S W
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 205 EIVDLFNEM-RDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTAV 263
E + LF M + +K +E +++ L+AC + LG I ++ N+ + T++
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 264 VDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNE 323
VDMY KCG +DKA +F++M ++ + +SAMISG + + AL +F M + P+
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 324 VTMVSVLSCCAVLGALETGKWVHL-YVKKKRMELTITLGTALMDFYAKCGLIENAVEVFK 382
V VSVL+ C+ G ++ G+ V +K+ ++E T L+D + GL+E A+E +
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 383 KMPL-KNVFFW-TVLIQCLASNGQGERALETYYIMREKNIEPNDVAFIAVL 431
+P+ KN W T L QC + +++ + P D I+ L
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNL 446
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 351/627 (55%), Gaps = 40/627 (6%)
Query: 103 QEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTL 162
+EAV L L + +P T+ ++ CS+ RALEEG+++H I SGF ++ N L
Sbjct: 71 REAVQL----LGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 163 IHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG----- 217
+ +YA CG + ARK+FD M NRD+ SWN M +GY + E LF+EM +
Sbjct: 127 LRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 218 ------VKFD---EVTLINVLMACGRLAD--------------------IELGGWISEYM 248
VK D E ++ LM R+ + I G I ++
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQ--RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 249 EEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEAL 308
L+ + L ++++DMY KCG +D+AR +F+++ KDVV+W++MI Y ++ R +E
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGF 304
Query: 309 GVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALMDFY 368
+F ++ + PNE T VL+ CA L E GK VH Y+ + + ++L+D Y
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMY 364
Query: 369 AKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVAFI 428
KCG IE+A V P ++ WT LI A NGQ + AL+ + ++ + +P+ V F+
Sbjct: 365 TKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFV 424
Query: 429 AVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNMPI 488
VLSAC+H G+V++G E F S++ L +HY C+VD+L R+G E+ I MP+
Sbjct: 425 NVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484
Query: 489 PPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRV 548
P+ +W ++L C + N+ + EE+ + L +EP + Y+ +++IYA+AG+ E+ ++
Sbjct: 485 KPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKM 544
Query: 549 MNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVPNT 608
+M+E G+ K PG S E+ + + F+A D P + ++ + + K++K GYVP T
Sbjct: 545 RKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPAT 604
Query: 609 ADARLDAEEDDKEASVAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATKIISKV 668
+ D E++ KE ++ +HSEKLA+AF ++ GT I++ KNLR C DCH A K IS +
Sbjct: 605 SLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNI 664
Query: 669 FNREIVVRDRTRFHHFKEGSCSCNDYW 695
R+I VRD TRFH F+ G CSC DYW
Sbjct: 665 TKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 201/377 (53%), Gaps = 8/377 (2%)
Query: 71 MDYALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTM--LQNSVEPDRFTFACTL 128
++ A +F ++ E DS ++ M+ + K P+EA++LY M + NS P+ FT + +
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS-RPNIFTVSIAV 225
Query: 129 KACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSNRDVF 188
A + ++ + G++IH I+++G +++ ++L+ +Y CG ID AR +FD++ +DV
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 189 SWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYM 248
SW SM Y K+ WRE LF+E+ + +E T VL AC L ELG + YM
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 249 EEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEAL 308
+ +++VDMY KCG+++ A+ + + D+V+W+++I G +Q + EAL
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405
Query: 309 GVFHDMQMANVVPNEVTMVSVLSCCAVLGALETG-KWVHLYVKKKRMELTITLGTALMDF 367
F + + P+ VT V+VLS C G +E G ++ + +K R+ T T L+D
Sbjct: 406 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDL 465
Query: 368 YAKCGLIENAVEVFKKMPLK-NVFFWTVLIQCLASNGQGERALETYYIMREKNIEP-NDV 425
A+ G E V +MP+K + F W ++ ++ G + A E + + IEP N V
Sbjct: 466 LARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPV 523
Query: 426 AFIAVLSACSHVGMVDE 442
++ + + + G +E
Sbjct: 524 TYVTMANIYAAAGKWEE 540
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 148/323 (45%), Gaps = 17/323 (5%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
++H H++++ + + +L++ +D A +IF KI E D ++ MI +
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYG---KCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
+E L+ ++ + P+ +TFA L AC+ + E G+Q+H + + GF
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 158 VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLG 217
+++L+ +Y CG I+ A+ + D D+ SW S+ G + E + F+ + G
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 218 VKFDEVTLINVLMACGRLADIELG-GWISEYMEEKELNGNVKLMTAVVDMYAKCGHVDKA 276
K D VT +NVL AC +E G + E+ L+ T +VD+ A+ G ++
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 277 RRLFEQMNIK-DVVAWSAMISG---YSQARRCKEALGVFHDMQMANVVPNEVTMVSVLSC 332
+ + +M +K W++++ G Y +EA ++ N V VTM ++ +
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV-TYVTMANIYAA 534
Query: 333 CAVLGALETGKWVHLYVKKKRME 355
GKW +KRM+
Sbjct: 535 --------AGKWEEEGKMRKRMQ 549
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/632 (37%), Positives = 349/632 (55%), Gaps = 13/632 (2%)
Query: 74 ALSIFHKINEPDSSAYNIMIRAFTLKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKAC-S 132
A +F +I +PD+ +YN +I + + A++L+K M + E D FT + + AC
Sbjct: 93 ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD 152
Query: 133 RIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGRIDIARKMFDRMSN-RDVFSWN 191
R+ ++ Q+H + GF V N + Y+ G + A +F M RD SWN
Sbjct: 153 RVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWN 209
Query: 192 SMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEK 251
SM Y + + + + L+ EM G K D TL +VL A L + G + +
Sbjct: 210 SMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA 269
Query: 252 ELNGNVKLMTAVVDMYAKCGHVD---KARRLFEQMNIKDVVAWSAMISGYSQARR-CKEA 307
+ N + + ++D Y+KCG D + ++F+++ D+V W+ MISGYS +EA
Sbjct: 270 GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEA 329
Query: 308 LGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVH-LYVKKKRMELTITLGTALMD 366
+ F MQ P++ + V V S C+ L + K +H L +K I++ AL+
Sbjct: 330 VKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALIS 389
Query: 367 FYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPNDVA 426
Y K G +++A VF +MP N + +I+ A +G G AL Y M + I PN +
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 427 FIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAGLVEEAYQFIKNM 486
F+AVLSAC+H G VDEG+E F +M F +EP EHY CM+D+LGRAG +EEA +FI M
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Query: 487 PIPPNPVIWRTLLAACRAHKNVKVGEESLKNLVTLEPMHSGDYILLSDIYASAGRCEDAL 546
P P V W LL ACR HKN+ + E + L+ ++P+ + Y++L+++YA A + E+
Sbjct: 510 PYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMA 569
Query: 547 RVMNQMREQGIKKTPGCSLIELDGEIYEFLAEDNMCPHFKEVYDATENMMKRIKSAGYVP 606
V MR + I+K PGCS IE+ + + F+AED P +EV + E MMK++K GYV
Sbjct: 570 SVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVM 629
Query: 607 NTADARLDAEEDDKEAS---VAHHSEKLAIAFGLIRASPGTTIRISKNLRVCTDCHNATK 663
+ A + +E + + HHSEKLA+AFGL+ G + + KNLR+C DCHNA K
Sbjct: 630 DKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIK 689
Query: 664 IISKVFNREIVVRDRTRFHHFKEGSCSCNDYW 695
+S V REI+VRD RFH FK+G CSC DYW
Sbjct: 690 FMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 227/528 (42%), Gaps = 92/528 (17%)
Query: 98 LKQSPQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQL 157
+ Q+P + +L++ E D FT G+ +HA +KS
Sbjct: 1 MNQTPWKFKTFRDLLLKSVAERDLFT----------------GKSLHALYVKSIVASSTY 44
Query: 158 VTNTLIHLYANCGR-------------------------------IDIARKMFDRMSNRD 186
++N ++LY+ CGR I IAR++FD + D
Sbjct: 45 LSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPD 104
Query: 187 VFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMACGRLADIELGGWISE 246
S+N++ SGY + LF MR LG + D TL ++ AC ++L +
Sbjct: 105 TVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHC 162
Query: 247 YMEEKELNGNVKLMTAVVDMYAKCGHVDKARRLFEQMN-IKDVVAWSAMISGYSQARRCK 305
+ + + A V Y+K G + +A +F M+ ++D V+W++MI Y Q +
Sbjct: 163 FSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA 222
Query: 306 EALGVFHDMQMANVVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTALM 365
+AL ++ +M + T+ SVL+ L L G+ H + K +G+ L+
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282
Query: 366 DFYAKCGLIE---NAVEVFKKMPLKNVFFWTVLIQCLASNGQ-GERALETYYIMREKNIE 421
DFY+KCG + ++ +VF+++ ++ W +I + N + E A++++ M+
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342
Query: 422 PNDVAFIAVLSACSHVGMVDEGREL-------------------FVSMSRD--------- 453
P+D +F+ V SACS++ + +++ +S+
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARW 402
Query: 454 -FDLEPRME--HYGCMVDILGRAGLVEEA---YQFIKNMPIPPNPVIWRTLLAACRAHKN 507
FD P + + CM+ + G EA YQ + + I PN + + +L+AC
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462
Query: 508 VKVGEE---SLKNLVTLEPMHSGDYILLSDIYASAGRCEDALRVMNQM 552
V G+E ++K +EP + Y + D+ AG+ E+A R ++ M
Sbjct: 463 VDEGQEYFNTMKETFKIEP-EAEHYSCMIDLLGRAGKLEEAERFIDAM 509
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 143/298 (47%), Gaps = 14/298 (4%)
Query: 38 QVHAHLIKSRFHLNPTISENLLEAAAILIPATTMDYALSIFHKINEPDSSAYNIMIRAFT 97
Q H LIK+ FH N + L++ + M + +F +I PD +N MI ++
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 98 LKQS-PQEAVMLYKTMLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQ 156
+ + +EAV ++ M + PD +F C ACS + + + +QIH +KS +
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 157 L-VTNTLIHLYANCGRIDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRD 215
+ V N LI LY G + AR +FDRM + S+N M GY + E + L+ M D
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 216 LGVKFDEVTLINVLMACGRLADIELGGWISEYMEEK-ELNGNVKLMTAVVDMYAKCGHVD 274
G+ +++T + VL AC ++ G M+E ++ + + ++D+ + G ++
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 275 KARRLFEQMNIK-DVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPNEVTMVSVLS 331
+A R + M K VAW+A++ C++ +M +A NE+ ++ L+
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGA------CRK----HKNMALAERAANELMVMQPLA 548
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,292,123
Number of Sequences: 539616
Number of extensions: 9897511
Number of successful extensions: 32083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 23901
Number of HSP's gapped (non-prelim): 2279
length of query: 695
length of database: 191,569,459
effective HSP length: 125
effective length of query: 570
effective length of database: 124,117,459
effective search space: 70746951630
effective search space used: 70746951630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)